Your job contains 1 sequence.
>010907
MGRNLSNHSESPVRDQGGPSRRRSLSRKSPSRRERSPVLHRSSHRGSSPAREKERHSSRA
KSPKRAQSQSPVSRSPSPRTRRLMRSRDERELGKVTEREQERNHSRKSDRGTHIGKSSSP
SPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGERTRSPVSRSPSPRTKRLRRAH
AEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRAS
DKDIHRERVSERETGSERKERRERDFEGDREGRKLGRNEASNQSSRSRRDRSTSPLDRPP
RSRHRSPQSADGSWARHEVMNSGGAEYRNDDIDSVAQMKAAEEALQAKEKQKPSFELSGK
LAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRVA
DIPTDHPSCSKQHAVIQFRQVEKEQPDAASMYYCMRTRMIDWHQGTFCMKEVPDFFLEEL
NSATRVGRCYLSGLFPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010907
(497 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085740 - symbol:DDL "AT3G20550" species:3702 ... 467 1.6e-53 2
UNIPROTKB|F1P3G6 - symbol:SNIP1 "Uncharacterized protein"... 319 1.0e-36 2
UNIPROTKB|Q8TAD8 - symbol:SNIP1 "Smad nuclear-interacting... 319 3.5e-36 2
MGI|MGI:2156003 - symbol:Snip1 "Smad nuclear interacting ... 319 5.7e-36 2
UNIPROTKB|E2R797 - symbol:SNIP1 "Uncharacterized protein"... 320 3.1e-35 2
RGD|1359268 - symbol:Snip1 "Smad nuclear interacting prot... 319 3.1e-35 2
UNIPROTKB|E1BNB3 - symbol:SNIP1 "Uncharacterized protein"... 319 5.0e-35 2
FB|FBgn0039943 - symbol:CG17168 species:7227 "Drosophila ... 297 1.9e-33 2
WB|WBGene00016323 - symbol:C32E8.5 species:6239 "Caenorha... 305 6.9e-32 2
UNIPROTKB|I3LQU1 - symbol:SNIP1 "Uncharacterized protein"... 319 1.1e-31 2
ASPGD|ASPL0000037677 - symbol:fhdA species:162425 "Emeric... 259 1.6e-28 2
UNIPROTKB|G4NE11 - symbol:MGG_00849 "Uncharacterized prot... 223 5.8e-20 2
TAIR|locus:2061052 - symbol:AT2G24410 "AT2G24410" species... 232 3.9e-19 1
DICTYBASE|DDB_G0280133 - symbol:DDB_G0280133 "CAMKL famil... 227 1.2e-16 2
GENEDB_PFALCIPARUM|PF13_0042 - symbol:PF13_0042 "fork hea... 177 2.7e-12 3
UNIPROTKB|Q8IEN7 - symbol:PF13_0042 "Fork head domain pro... 177 2.7e-12 3
UNIPROTKB|Q8WXA9 - symbol:SREK1 "Splicing regulatory glut... 149 2.0e-07 1
UNIPROTKB|E2R749 - symbol:SREK1 "Uncharacterized protein"... 148 2.6e-07 1
UNIPROTKB|J9P0H2 - symbol:SREK1 "Uncharacterized protein"... 148 3.5e-07 1
ZFIN|ZDB-GENE-030131-6117 - symbol:dido1 "death inducer-o... 155 3.7e-07 1
DICTYBASE|DDB_G0276577 - symbol:fray2 "FRAY subfamily pro... 150 4.2e-07 1
WB|WBGene00004704 - symbol:rsp-7 species:6239 "Caenorhabd... 145 4.5e-07 1
UNIPROTKB|E1C591 - symbol:PPIG "Uncharacterized protein" ... 146 7.6e-07 1
MGI|MGI:1914171 - symbol:Prpf38b "PRP38 pre-mRNA processi... 142 1.3e-06 1
RGD|621696 - symbol:Srek1 "splicing regulatory glutamine/... 141 1.5e-06 1
UNIPROTKB|Q9JKL7 - symbol:Srek1 "Splicing regulatory glut... 141 1.5e-06 1
UNIPROTKB|Q5T200 - symbol:ZC3H13 "Zinc finger CCCH domain... 145 2.6e-06 1
RGD|620315 - symbol:Ppig "peptidylprolyl isomerase G" spe... 141 2.7e-06 1
UNIPROTKB|O55035 - symbol:Ppig "Peptidyl-prolyl cis-trans... 141 2.7e-06 1
MGI|MGI:2145245 - symbol:Srek1 "splicing regulatory gluta... 138 3.1e-06 1
UNIPROTKB|E2RN56 - symbol:ZC3H13 "Uncharacterized protein... 147 4.0e-06 2
UNIPROTKB|E1BXC5 - symbol:ZC3H13 "Uncharacterized protein... 143 4.1e-06 1
MGI|MGI:2445173 - symbol:Ppig "peptidyl-prolyl isomerase ... 139 4.5e-06 1
RGD|1562940 - symbol:Prpf38b "PRP38 pre-mRNA processing f... 136 6.1e-06 1
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 140 6.1e-06 1
UNIPROTKB|Q5VTL8 - symbol:PRPF38B "Pre-mRNA-splicing fact... 136 6.1e-06 1
RGD|1307729 - symbol:Zc3h13 "zinc finger CCCH type contai... 141 7.4e-06 1
UNIPROTKB|F1N0H5 - symbol:ZC3H13 "Uncharacterized protein... 148 7.9e-06 2
UNIPROTKB|Q8TF01 - symbol:PNISR "Arginine/serine-rich pro... 136 1.1e-05 1
ZFIN|ZDB-GENE-040426-2878 - symbol:prpf38b "PRP38 pre-mRN... 132 1.5e-05 1
DICTYBASE|DDB_G0291063 - symbol:thoc2 "putative THO2 prot... 139 1.5e-05 1
DICTYBASE|DDB_G0267796 - symbol:DDB_G0267796 "initiation ... 141 1.9e-05 2
UNIPROTKB|F1RK00 - symbol:ZC3H13 "Uncharacterized protein... 139 2.5e-05 2
UNIPROTKB|I3LLA0 - symbol:RBM25 "Uncharacterized protein"... 129 3.3e-05 1
UNIPROTKB|E1BSR5 - symbol:RBM25 "Uncharacterized protein"... 130 4.6e-05 1
UNIPROTKB|E2RSE4 - symbol:PPIG "Uncharacterized protein" ... 129 5.5e-05 1
UNIPROTKB|J9PAE8 - symbol:PPIG "Uncharacterized protein" ... 129 5.7e-05 1
CGD|CAL0000980 - symbol:orf19.4330 species:5476 "Candida ... 128 6.5e-05 1
UNIPROTKB|Q5AG50 - symbol:CaO19.4330 "Putative uncharacte... 128 6.5e-05 1
UNIPROTKB|E1BHM5 - symbol:RBM25 "Uncharacterized protein"... 129 6.6e-05 1
UNIPROTKB|P49756 - symbol:RBM25 "RNA-binding protein 25" ... 129 6.6e-05 1
ZFIN|ZDB-GENE-050626-88 - symbol:rbmx2 "RNA binding motif... 125 7.5e-05 1
ZFIN|ZDB-GENE-030131-605 - symbol:srsf11 "serine/arginine... 124 0.00010 1
ZFIN|ZDB-GENE-040426-1619 - symbol:zc3h13 "zinc finger CC... 130 0.00012 1
UNIPROTKB|F1PEZ0 - symbol:SRSF4 "Uncharacterized protein"... 123 0.00014 1
ZFIN|ZDB-GENE-040426-2822 - symbol:ppig "peptidyl-prolyl ... 125 0.00014 1
MGI|MGI:1914289 - symbol:Rbm25 "RNA binding motif protein... 126 0.00014 1
UNIPROTKB|F1NJ03 - symbol:SRSF4 "Uncharacterized protein"... 122 0.00015 1
UNIPROTKB|P09406 - symbol:snrnp70 "U1 small nuclear ribon... 122 0.00017 1
MGI|MGI:1913875 - symbol:Sfrs18 "serine/arginine-rich spl... 124 0.00022 1
UNIPROTKB|A7MB38 - symbol:SFRS4 "SFRS4 protein" species:9... 121 0.00024 1
ASPGD|ASPL0000005981 - symbol:AN6342 species:162425 "Emer... 124 0.00027 1
FB|FBgn0032388 - symbol:CG6686 species:7227 "Drosophila m... 124 0.00027 1
DICTYBASE|DDB_G0287625 - symbol:DDB_G0287625 species:4468... 124 0.00028 1
DICTYBASE|DDB_G0270880 - symbol:gflC "PHD zinc finger-con... 126 0.00032 1
ASPGD|ASPL0000001876 - symbol:AN5949 species:162425 "Emer... 118 0.00039 1
GENEDB_PFALCIPARUM|PFL0625c - symbol:PFL0625c "eukaryotic... 124 0.00041 1
UNIPROTKB|Q8I5S6 - symbol:PFL0625c "Eukaryotic translatio... 124 0.00041 1
UNIPROTKB|E9PG73 - symbol:PPIG "Peptidyl-prolyl cis-trans... 121 0.00042 1
UNIPROTKB|Q13427 - symbol:PPIG "Peptidyl-prolyl cis-trans... 121 0.00043 1
FB|FBgn0035253 - symbol:CG7971 species:7227 "Drosophila m... 124 0.00050 1
ZFIN|ZDB-GENE-030131-6070 - symbol:nipblb "nipped-b homol... 132 0.00054 2
UNIPROTKB|F1S1V5 - symbol:PPIG "Uncharacterized protein" ... 120 0.00055 1
UNIPROTKB|F1PJD3 - symbol:TRAF3IP1 "Uncharacterized prote... 119 0.00064 1
DICTYBASE|DDB_G0291966 - symbol:DDB_G0291966 "CCHC-type z... 114 0.00066 1
UNIPROTKB|Q08170 - symbol:SRSF4 "Serine/arginine-rich spl... 117 0.00066 1
MGI|MGI:1890577 - symbol:Srsf4 "serine/arginine-rich spli... 116 0.00084 1
UNIPROTKB|A8E658 - symbol:PPIG "Uncharacterized protein" ... 118 0.00092 1
UNIPROTKB|E1BDN8 - symbol:E1BDN8 "Uncharacterized protein... 116 0.00092 1
DICTYBASE|DDB_G0281687 - symbol:DDB_G0281687 "U2 snRNP-as... 119 0.00095 1
>TAIR|locus:2085740 [details] [associations]
symbol:DDL "AT3G20550" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0048638
"regulation of developmental growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0003723 "RNA binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA"
evidence=RCA;IMP;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0016569 "covalent chromatin
modification" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498
PROSITE:PS50006 SMART:SM00240 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008283
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0003723 GO:GO:0048638
EMBL:AP000410 GO:GO:0035196 EMBL:AY062626 EMBL:BT000005
IPI:IPI00526203 RefSeq:NP_188691.1 UniGene:At.27430
ProteinModelPortal:Q8W4D8 SMR:Q8W4D8 DIP:DIP-46412N IntAct:Q8W4D8
STRING:Q8W4D8 PaxDb:Q8W4D8 PRIDE:Q8W4D8 ProMEX:Q8W4D8
EnsemblPlants:AT3G20550.1 GeneID:821601 KEGG:ath:AT3G20550
TAIR:At3g20550 eggNOG:NOG271234 HOGENOM:HOG000264922
InParanoid:Q8W4D8 KO:K13108 OMA:YINESPI PhylomeDB:Q8W4D8
ProtClustDB:CLSN2915617 Genevestigator:Q8W4D8 Uniprot:Q8W4D8
Length = 314
Score = 467 (169.5 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 91/135 (67%), Positives = 104/135 (77%)
Query: 315 ARH-EVMNS-GGAEYRNDDIDSVXXXXXXXXXXXXXXXXXPSFELSGKLAAETNRFRGVT 372
+RH E N+ GG+E N + DSV PSFELSGKLA ETNR+RG+T
Sbjct: 121 SRHDEGSNARGGSEEPNVEEDSVARMRAVEEALAAKKKEEPSFELSGKLAEETNRYRGIT 180
Query: 373 LLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQ 432
LLFNEPP+ARKPS RWRLYVFK GE L EPL +HRQSCYLFGRERR+ADIPTDHPSCSKQ
Sbjct: 181 LLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCSKQ 240
Query: 433 HAVIQFRQVEKEQPD 447
HAVIQ+R++EKE+PD
Sbjct: 241 HAVIQYREMEKEKPD 255
Score = 104 (41.7 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 41/143 (28%), Positives = 62/143 (43%)
Query: 117 SSSPSPRTRRLARARDEGDAERVTERD-----HERNNGRENGK--GKLGEXXXXXXXXXX 169
S SPSPRT+RL RAR E + R ER+ E+ N RE + G+ +
Sbjct: 5 SRSPSPRTKRLRRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGEGERD 64
Query: 170 XXXXKRLRRAHAEKDADKL--TEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKV 227
+ RR+ E D +K T + ER +SR + + P RS H R + +
Sbjct: 65 REVGDKRRRSGRE-DTEKRRRTRTDDER-YSRGRHERSTSPSDRS---HRSSRRSPERAI 119
Query: 228 TERERENDHSRASDKDIHRERVS 250
R E ++R ++ + E S
Sbjct: 120 ASRHDEGSNARGGSEEPNVEEDS 142
Score = 102 (41.0 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 208 PVSRSPSPHTKRLRRA--DAKV-TEREREND-------HSRASDKDIHRERVSERE 253
P SRSPSP TKRLRRA + ++ RERE+D +SR D+DI R+R ER+
Sbjct: 3 PSSRSPSPRTKRLRRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERK 58
Score = 63 (27.2 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 30/112 (26%), Positives = 43/112 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKV-TE-R 98
RS R RE+E+ +SR + R R G+ TE R
Sbjct: 26 RSRER-EDDGREREKRNSRERD--RDIGRDRDRERKGEGERDREVGDKRRRSGREDTEKR 82
Query: 99 EQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGR 150
+ R + RG H +S+SPS R+ R +R E + R E +N R
Sbjct: 83 RRTRTDDERYSRGRH-ERSTSPSDRSHRSSRRSPE---RAIASRHDEGSNAR 130
>UNIPROTKB|F1P3G6 [details] [associations]
symbol:SNIP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007249 "I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0035196 "production of miRNAs involved
in gene silencing by miRNA" evidence=IEA] InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 SMART:SM00240
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0007249 GO:GO:0035196 OMA:GQEHRRA
GeneTree:ENSGT00670000098011 EMBL:AADN02043895 IPI:IPI00589850
Ensembl:ENSGALT00000003131 Uniprot:F1P3G6
Length = 373
Score = 319 (117.4 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 61/95 (64%), Positives = 70/95 (73%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYL 412
PSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E L +YIHRQS YL
Sbjct: 201 PSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEFLPV-MYIHRQSAYL 259
Query: 413 FGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPD 447
GR RR+ADIP DHPSCSKQHAV Q+R VE + D
Sbjct: 260 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEHTRAD 294
Score = 92 (37.4 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 37/164 (22%), Positives = 69/164 (42%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
ER +V + ++R+ R R G S SP RR +R R + R +R +
Sbjct: 15 ERRRWEVAVKAEKRSPRRSGSRSAR-G-SQSPPAEERRGSRGR----SSRSPKRKSKSGR 68
Query: 149 GRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLP 208
++ +G+ RR + E+ +E+EH R+ R+ D++ H
Sbjct: 69 RSKSPRGRRSRSPHHGAVRVKQERDDHPRRGNEERKQRHTSEQEHRRD--RSGDRDRHRD 126
Query: 209 VS-RSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSE 251
S R +P + R + ER+ +N + ++++ + ER E
Sbjct: 127 HSDRRKNPSERPGGRGHER--ERDVQNIREQQAEREFYNERRRE 168
Score = 70 (29.7 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 32/124 (25%), Positives = 50/124 (40%)
Query: 42 SSHRGSSPAREKERHSSRAKSPK--RAQXXXXXXXXXXXXXXXX-XXXXDERELGKVTER 98
S R S + K + R+KSP+ R++ +ER+ +E+
Sbjct: 52 SRGRSSRSPKRKSKSGRRSKSPRGRRSRSPHHGAVRVKQERDDHPRRGNEERKQRHTSEQ 111
Query: 99 EQERNHSRKSDRGT-HIGKSSSPSPRT--RRLARARD-EGDAERVTERD---HERNNGRE 151
E R+ S DR H + +PS R R R RD + E+ ER+ R R+
Sbjct: 112 EHRRDRSGDRDRHRDHSDRRKNPSERPGGRGHERERDVQNIREQQAEREFYNERRREHRQ 171
Query: 152 NGKG 155
N +G
Sbjct: 172 NNEG 175
Score = 66 (28.3 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 33/150 (22%), Positives = 57/150 (38%)
Query: 106 RKSDR--GTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXX 163
++S R G+ + S P R G + R +R + ++ +G+
Sbjct: 27 KRSPRRSGSRSARGSQSPPAEERRG---SRGRSSRSPKRKSKSGRRSKSPRGRRSRSPHH 83
Query: 164 XXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRA 223
RR + E+ +E+EH R+ R+ D++ H R H+ R +
Sbjct: 84 GAVRVKQERDDHPRRGNEERKQRHTSEQEHRRD--RSGDRDRH----RD---HSDRRKNP 134
Query: 224 DAKVTERERENDHSRASDKDIHRERVSERE 253
+ER H R D RE+ +ERE
Sbjct: 135 ----SERPGGRGHERERDVQNIREQQAERE 160
Score = 60 (26.2 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 34/167 (20%), Positives = 56/167 (33%)
Query: 43 SHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQER 102
S RGS +ER SR +S + + G V +++
Sbjct: 37 SARGSQSPPAEERRGSRGRSSRSPKRKSKSGRRSKSPRGRRSRSPHH---GAVRVKQERD 93
Query: 103 NHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXX 162
+H R RG K S + R R+ GD +R + R N E G+ E
Sbjct: 94 DHPR---RGNEERKQRHTSEQEHRRDRS---GDRDRHRDHSDRRKNPSERPGGRGHERER 147
Query: 163 XXXXXXXXXXXKRL----RRAHAEKDADKLTEK--EHERNHSRTSDK 203
+ RR H + + ++ EH ++ ++ DK
Sbjct: 148 DVQNIREQQAEREFYNERRREHRQNNEGSGVDQNPEHRQSDNKPKDK 194
Score = 54 (24.1 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 19/82 (23%), Positives = 31/82 (37%)
Query: 175 RLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTEREREN 234
R R+ K K SR+ A + V + H +R + E+E+
Sbjct: 55 RSSRSPKRKSKSGRRSKSPRGRRSRSPHHGA-VRVKQERDDHPRRGNEERKQRHTSEQEH 113
Query: 235 DHSRASDKDIHRERVSERETGS 256
R+ D+D HR+ R+ S
Sbjct: 114 RRDRSGDRDRHRDHSDRRKNPS 135
Score = 46 (21.3 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 218 KRLRRADAKVTERERENDHSRASDKDIHRERVSERETG 255
++ R + R+R D R D R+ SER G
Sbjct: 103 RKQRHTSEQEHRRDRSGDRDRHRDHSDRRKNPSERPGG 140
Score = 39 (18.8 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 18/67 (26%), Positives = 23/67 (34%)
Query: 190 EKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERV 249
E ER R + A RSP R R ER R+S + R+
Sbjct: 7 EAAAERRRERRRWEVAVKAEKRSPRRSGSRSARGSQSPPAEERRGSRGRSS-RSPKRKSK 65
Query: 250 SERETGS 256
S R + S
Sbjct: 66 SGRRSKS 72
>UNIPROTKB|Q8TAD8 [details] [associations]
symbol:SNIP1 "Smad nuclear-interacting protein 1"
species:9606 "Homo sapiens" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 PROSITE:PS50006 SMART:SM00240 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 Gene3D:2.60.200.20 SUPFAM:SSF49879
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007249
GO:GO:0035196 eggNOG:NOG271234 HOGENOM:HOG000264922 KO:K13108
EMBL:AY081909 EMBL:AK022615 EMBL:AK027622 EMBL:BC027040
IPI:IPI00154515 RefSeq:NP_078976.2 UniGene:Hs.47232
ProteinModelPortal:Q8TAD8 SMR:Q8TAD8 DIP:DIP-38956N IntAct:Q8TAD8
MINT:MINT-1181692 STRING:Q8TAD8 PhosphoSite:Q8TAD8 DMDM:48428655
PaxDb:Q8TAD8 PRIDE:Q8TAD8 DNASU:79753 Ensembl:ENST00000296215
GeneID:79753 KEGG:hsa:79753 UCSC:uc001cbi.3 CTD:79753
GeneCards:GC01M038002 HGNC:HGNC:30587 HPA:HPA036896 MIM:608241
MIM:614501 neXtProt:NX_Q8TAD8 PharmGKB:PA142670893
HOVERGEN:HBG056615 InParanoid:Q8TAD8 OMA:GQEHRRA OrthoDB:EOG451DRR
PhylomeDB:Q8TAD8 ChiTaRS:SNIP1 GenomeRNAi:79753 NextBio:69203
ArrayExpress:Q8TAD8 Bgee:Q8TAD8 CleanEx:HS_SNIP1
Genevestigator:Q8TAD8 GermOnline:ENSG00000163877 Uniprot:Q8TAD8
Length = 396
Score = 319 (117.4 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 61/95 (64%), Positives = 71/95 (74%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYL 412
PSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS YL
Sbjct: 224 PSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV-MYIHRQSAYL 282
Query: 413 FGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPD 447
GR RR+ADIP DHPSCSKQHAV Q+R VE + D
Sbjct: 283 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRAD 317
Score = 87 (35.7 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 31/146 (21%), Positives = 53/146 (36%)
Query: 110 RGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGK-GKLGEXXXXXXXXX 168
R H G SPSP T AR+ G+ R R + + +G+ K
Sbjct: 45 RPDHSG--GSPSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHH 102
Query: 169 XXXXXKRLRRAHAEK---DADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADA 225
K+ R H + D E E +R SD++ H S +R
Sbjct: 103 STVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQG 162
Query: 226 KVTERERENDHSRASDKDIHRERVSE 251
+ +R+ +N ++ +++ + R E
Sbjct: 163 QGRDRDTQNLQAQEEEREFYNARRRE 188
Score = 75 (31.5 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 31/118 (26%), Positives = 46/118 (38%)
Query: 41 RSSHRGS-------SPAREKERHSSR-AKSPKRAQXXXXXXXXXXXXXXXXXXXXDEREL 92
RS HRG+ SP ++K + S R +KSP+ + RE
Sbjct: 62 RSGHRGNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPRRGRED 121
Query: 93 GKVTE-REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEG---DAERVTERDHER 146
+ E EQE +R SDR H G S R + +G D + + ++ ER
Sbjct: 122 RQHREPSEQEHRRARNSDRDRHRGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEER 179
Score = 60 (26.2 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 195 RNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTE-RERENDHSRASDKDIHRERVSERE 253
R+ S + + V + H +R R D + E E+E+ +R SD+D HR +R
Sbjct: 93 RSKRNRSPHHSTVKVKQEREDHPRR-GREDRQHREPSEQEHRRARNSDRDRHRGHSHQRR 151
Query: 254 TGS 256
T +
Sbjct: 152 TSN 154
Score = 57 (25.1 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 23/110 (20%), Positives = 36/110 (32%)
Query: 42 SSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQE 101
S R SP R K S + K Q E + ++R++
Sbjct: 85 SGRRSKSP-RSKRNRSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRH 143
Query: 102 RNHS---RKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
R HS R S+ G+ T+ L +E + R+H + N
Sbjct: 144 RGHSHQRRTSNERPGSGQGQGRDRDTQNLQAQEEEREFYNARRREHRQRN 193
Score = 53 (23.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 40/182 (21%), Positives = 63/182 (34%)
Query: 47 SSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHSR 106
S PAR R +RA+ R+ V +++ +H R
Sbjct: 58 SEPARSGHR-GNRARGVSRSPPKKKNKASGRRSKSPRSKRNRSPHHSTVKVKQEREDHPR 116
Query: 107 KSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGREN-GKGKLGEXXXXXX 165
RG + PS + R RAR+ D +R H+R E G G+ G+
Sbjct: 117 ---RGREDRQHREPSEQEHR--RARNS-DRDRHRGHSHQRRTSNERPGSGQ-GQGRDRDT 169
Query: 166 XXXXXXXXKRLRRAHAEKDADKLTEKEH-ERNHSRTSDKEAHLPVSRSPSPHTKRLRRAD 224
+ L+ E++ +EH +RN E+ V R P + K +
Sbjct: 170 --------QNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPR-PGGNNKE-KEVP 219
Query: 225 AK 226
AK
Sbjct: 220 AK 221
Score = 52 (23.4 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 22/117 (18%), Positives = 42/117 (35%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R S + PA + HS + SP ++ ++ K + R
Sbjct: 33 RLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHRGNRARGVSRS---PPKKKNKASGRRS 89
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER--NNGRENGKG 155
+ S+++ R H R R R++ +E++H R N+ R+ +G
Sbjct: 90 KSPRSKRN-RSPHHSTVKVKQEREDHPRRGREDRQHREPSEQEHRRARNSDRDRHRG 145
>MGI|MGI:2156003 [details] [associations]
symbol:Snip1 "Smad nuclear interacting protein 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IDA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=ISO] InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498
PROSITE:PS50006 SMART:SM00240 MGI:MGI:2156003 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0007249 GO:GO:0035196 eggNOG:NOG271234 HOGENOM:HOG000264922
KO:K13108 CTD:79753 HOVERGEN:HBG056615 OMA:GQEHRRA
OrthoDB:EOG451DRR EMBL:AK040571 EMBL:AK049254 EMBL:AK049318
EMBL:AK132768 EMBL:AK143801 EMBL:BC064067 IPI:IPI00308559
RefSeq:NP_780455.2 UniGene:Mm.22548 ProteinModelPortal:Q8BIZ6
SMR:Q8BIZ6 STRING:Q8BIZ6 PhosphoSite:Q8BIZ6 PRIDE:Q8BIZ6
Ensembl:ENSMUST00000052183 GeneID:76793 KEGG:mmu:76793
GeneTree:ENSGT00670000098011 InParanoid:Q8BIZ6 NextBio:345823
Bgee:Q8BIZ6 CleanEx:MM_SNIP1 Genevestigator:Q8BIZ6
GermOnline:ENSMUSG00000050213 Uniprot:Q8BIZ6
Length = 383
Score = 319 (117.4 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 61/95 (64%), Positives = 71/95 (74%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYL 412
PSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS YL
Sbjct: 211 PSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV-MYIHRQSAYL 269
Query: 413 FGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPD 447
GR RR+ADIP DHPSCSKQHAV Q+R VE + D
Sbjct: 270 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRAD 304
Score = 85 (35.0 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 42 SSHRGS---SPAREKERHSSR-AKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTE 97
S HRGS SPA++K + S R +KSP+ + RE + E
Sbjct: 59 SGHRGSRARSPAKKKSKSSGRRSKSPRTKRSQSPHYPMVKVKQEREDHPRRGREDRQHRE 118
Query: 98 -REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERN 147
EQE +R S+R H G S R +D + D++ + ++ ER+
Sbjct: 119 PSEQEHRRARNSERDRHRGHSRQGRSSDERPVSGQDRDRDSQNLQAQEEERD 170
Score = 67 (28.6 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 26/137 (18%), Positives = 55/137 (40%)
Query: 117 SSSPSPRTRRLARARDEGDAERVTERDHERNNGR--ENGKGKLGEXXXXXXXXXXXXXXK 174
++S SP + G R + +++GR ++ + K +
Sbjct: 46 AASLSPPAAEPGHSGHRGSRARSPAKKKSKSSGRRSKSPRTKRSQSPHYPMVKVKQERED 105
Query: 175 RLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTEREREN 234
RR ++ + +E+EH R +R S+++ H SR +R + +R+ +N
Sbjct: 106 HPRRGREDRQHREPSEQEHRR--ARNSERDRHRGHSRQGRSSDER--PVSGQDRDRDSQN 161
Query: 235 DHSRASDKDIHRERVSE 251
++ ++D H R E
Sbjct: 162 LQAQEEERDFHNARRRE 178
Score = 61 (26.5 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 193 HERNHSRT-SDKEAHLPVSRSPSPHTKRLRRADAKVTE--RERENDHSRASDKDIHRERV 249
H + +R+ + K++ RS SP TKR + + + +ERE DH R +D
Sbjct: 61 HRGSRARSPAKKKSKSSGRRSKSPRTKRSQSPHYPMVKVKQERE-DHPRRGREDRQHREP 119
Query: 250 SERE 253
SE+E
Sbjct: 120 SEQE 123
Score = 58 (25.5 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 195 RNHSRTSDKEAHLP-VSRSPSPHTKRLR----RADAKVTERERENDHSRASDKDIHRERV 249
+ S++S + + P RS SPH ++ R D RE + H S+++ R R
Sbjct: 71 KKKSKSSGRRSKSPRTKRSQSPHYPMVKVKQEREDHPRRGRE-DRQHREPSEQEHRRARN 129
Query: 250 SERE 253
SER+
Sbjct: 130 SERD 133
Score = 55 (24.4 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 32/162 (19%), Positives = 54/162 (33%)
Query: 48 SPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHSRK 107
SP + HS S R+ V +++ +H R
Sbjct: 50 SPPAAEPGHSGHRGSRARSPAKKKSKSSGRRSKSPRTKRSQSPHYPMVKVKQEREDHPR- 108
Query: 108 SDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXXXXXX 167
RG + PS + R AR ++ER R H R GR + + +
Sbjct: 109 --RGREDRQHREPSEQEHRRAR-----NSERDRHRGHSRQ-GRSSDERPVS-------GQ 153
Query: 168 XXXXXXKRLRRAHAEKDADKLTEKEH-ERNHSRTSDKEAHLP 208
+ L+ E+D +EH ++N S S+ + +P
Sbjct: 154 DRDRDSQNLQAQEEERDFHNARRREHRQQNESAGSEAQEVIP 195
>UNIPROTKB|E2R797 [details] [associations]
symbol:SNIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035196 "production of miRNAs involved in
gene silencing by miRNA" evidence=IEA] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0007249 GO:GO:0035196
KO:K13108 CTD:79753 OMA:GQEHRRA GeneTree:ENSGT00670000098011
EMBL:AAEX03009605 RefSeq:XP_532557.3 Ensembl:ENSCAFT00000005285
GeneID:475330 KEGG:cfa:475330 NextBio:20851182 Uniprot:E2R797
Length = 397
Score = 320 (117.7 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 65/113 (57%), Positives = 79/113 (69%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYL 412
PSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS YL
Sbjct: 225 PSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV-MYIHRQSAYL 283
Query: 413 FGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPDAASMYYCMRTRMIDWHQG 465
GR RR+ADIP DHPSCSKQHAV Q+R VE + D ++ +R +ID G
Sbjct: 284 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADG-TVGRRVRPYIIDLGSG 335
Score = 77 (32.2 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 35/117 (29%), Positives = 49/117 (41%)
Query: 40 HRSSH-RGSS--PAREKERHSSR-AKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKV 95
HR S RG S PA+ K + S R +KSP+ + RE
Sbjct: 66 HRGSRARGGSRSPAKRKNKSSGRRSKSPRSKRSRSPHHSTVKVKQEREDHPRRGREERPH 125
Query: 96 TERE-QERNHSRKSDRGTHIG-----KSSSPSPRTRRLARARDEGDAERVTERDHER 146
E QE +R SDR H G +SS+ P + + A+ RD D + + +D ER
Sbjct: 126 REPSGQEHRRARNSDRDRHRGHSHQRRSSNERPGSGQ-AQGRDR-DIQNLQAQDAER 180
Score = 64 (27.6 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 30/150 (20%), Positives = 59/150 (39%)
Query: 104 HSR-KSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENG-KGKLGEXX 161
H R +S G+ + P R +RAR G + +R ++ + R + K
Sbjct: 44 HRRPESSGGSASPPAGDPGRPGHRGSRAR--GGSRSPAKRKNKSSGRRSKSPRSKRSRSP 101
Query: 162 XXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLR 221
RR E+ + + +EH R +R SD++ H S +R
Sbjct: 102 HHSTVKVKQEREDHPRRGREERPHREPSGQEHRR--ARNSDRDRHRGHSHQRRSSNERPG 159
Query: 222 RADAKVTERERENDHSRASDKDIHRERVSE 251
A+ +R+ +N ++ ++++ + R E
Sbjct: 160 SGQAQGRDRDIQNLQAQDAEREFYDARRRE 189
Score = 51 (23.0 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 195 RNHSRTSDKEAHLPVS-RSPSPH--TKRLR--RADAKVTERE----RE---NDHSRA--S 240
+ +++S + + P S RS SPH T +++ R D RE RE +H RA S
Sbjct: 80 KRKNKSSGRRSKSPRSKRSRSPHHSTVKVKQEREDHPRRGREERPHREPSGQEHRRARNS 139
Query: 241 DKDIHRERVSERETGS 256
D+D HR +R + +
Sbjct: 140 DRDRHRGHSHQRRSSN 155
Score = 50 (22.7 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 12/59 (20%), Positives = 29/59 (49%)
Query: 98 REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGK 156
+ + ++ R+S + +S SP T ++ + R++ ER H +G+E+ + +
Sbjct: 80 KRKNKSSGRRS-KSPRSKRSRSPHHSTVKVKQEREDHPRRGREERPHREPSGQEHRRAR 137
>RGD|1359268 [details] [associations]
symbol:Snip1 "Smad nuclear interacting protein 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=ISO;ISS]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 SMART:SM00240
RGD:1359268 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0007249 GO:GO:0035196
eggNOG:NOG271234 HOGENOM:HOG000264922 KO:K13108 CTD:79753
HOVERGEN:HBG056615 OMA:GQEHRRA OrthoDB:EOG451DRR
GeneTree:ENSGT00670000098011 EMBL:BC087118 IPI:IPI00359319
RefSeq:NP_001014091.1 RefSeq:XP_003751496.1 UniGene:Rn.8811
ProteinModelPortal:Q5M9G6 STRING:Q5M9G6 Ensembl:ENSRNOT00000037510
GeneID:100912429 GeneID:313588 KEGG:rno:100912429 KEGG:rno:313588
UCSC:RGD:1359268 InParanoid:Q5M9G6 NextBio:666488
Genevestigator:Q5M9G6 Uniprot:Q5M9G6
Length = 389
Score = 319 (117.4 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 61/95 (64%), Positives = 71/95 (74%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYL 412
PSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS YL
Sbjct: 215 PSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV-MYIHRQSAYL 273
Query: 413 FGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPD 447
GR RR+ADIP DHPSCSKQHAV Q+R VE + D
Sbjct: 274 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRAD 308
Score = 78 (32.5 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 34/120 (28%), Positives = 51/120 (42%)
Query: 40 HRSSH-RGSS--PAREKERHSSR-AKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKV 95
HR S RG+S PA++K + S R +KSP+ + RE +
Sbjct: 61 HRGSRARGASRSPAKKKSKSSGRRSKSPRTKRSRSPHYSTVKVKQEREDHPRRGREDRQH 120
Query: 96 TE-REQERNHSRKSDRGTHIGKSSSPSPRTRR--LARARDEGDAERVTERDHER--NNGR 150
E EQE +R S+R H G + R + RD D++ + ++ ER NN R
Sbjct: 121 RELSEQEHRRARNSERDRHRGHARQRRSSDERPVSGQGRDR-DSQILQAQEEERDFNNAR 179
Score = 73 (30.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 30/142 (21%), Positives = 56/142 (39%)
Query: 117 SSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGK-GKLGEXXXXXXXXXXXXXXKR 175
++SP P A G R R + + +G+ K K+
Sbjct: 46 AASPPPPAAESGSAGHRGSRARGASRSPAKKKSKSSGRRSKSPRTKRSRSPHYSTVKVKQ 105
Query: 176 LRRAHAEKDAD-----KLTEKEHERNHSRTSDKE-AHLPVSRSPS--PHTKRLRRADAKV 227
R H + + +L+E+EH R + D+ H RS P + + R D+++
Sbjct: 106 EREDHPRRGREDRQHRELSEQEHRRARNSERDRHRGHARQRRSSDERPVSGQGRDRDSQI 165
Query: 228 TE-RERENDHSRASDKDIHRER 248
+ +E E D + A ++ HR++
Sbjct: 166 LQAQEEERDFNNARRRE-HRQQ 186
Score = 68 (29.0 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 33/124 (26%), Positives = 51/124 (41%)
Query: 42 SSHRGSS--PAREKERHSSR-AKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTE- 97
S RG+S PA++K + S R +KSP+ + RE + E
Sbjct: 64 SRARGASRSPAKKKSKSSGRRSKSPRTKRSRSPHYSTVKVKQEREDHPRRGREDRQHREL 123
Query: 98 REQERNHSRKSDRGTHIG-----KSSSPSP-------RTRRLARARDEG-DAERVTERDH 144
EQE +R S+R H G +SS P R ++ +A++E D R+H
Sbjct: 124 SEQEHRRARNSERDRHRGHARQRRSSDERPVSGQGRDRDSQILQAQEEERDFNNARRREH 183
Query: 145 ERNN 148
+ N
Sbjct: 184 RQQN 187
Score = 60 (26.2 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 23/126 (18%), Positives = 50/126 (39%)
Query: 90 RELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER--N 147
++ K + R + +++S R H R R R++ ++E++H R N
Sbjct: 75 KKKSKSSGRRSKSPRTKRS-RSPHYSTVKVKQEREDHPRRGREDRQHRELSEQEHRRARN 133
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKR----LRRAHAEKDADKLTEKEH-ERNHSRTSD 202
+ R+ +G + R L+ E+D + +EH ++N S ++
Sbjct: 134 SERDRHRGHARQRRSSDERPVSGQGRDRDSQILQAQEEERDFNNARRREHRQQNESAGAE 193
Query: 203 KEAHLP 208
+ +P
Sbjct: 194 AQEVIP 199
Score = 55 (24.4 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 178 RAHAEKDADKLTEKEHERNHS-RTS-DKEAH---LPVSRSPSPHTKRLRRADAKVTE-RE 231
R + A K ++ R+ S RT + H + V + H +R R D + E E
Sbjct: 67 RGASRSPAKKKSKSSGRRSKSPRTKRSRSPHYSTVKVKQEREDHPRR-GREDRQHRELSE 125
Query: 232 RENDHSRASDKDIHRERVSERET 254
+E+ +R S++D HR +R +
Sbjct: 126 QEHRRARNSERDRHRGHARQRRS 148
>UNIPROTKB|E1BNB3 [details] [associations]
symbol:SNIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=IEA] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0007249 GO:GO:0035196
KO:K13108 CTD:79753 OMA:GQEHRRA GeneTree:ENSGT00670000098011
EMBL:DAAA02009171 IPI:IPI00692816 RefSeq:NP_001192853.1
UniGene:Bt.83478 ProteinModelPortal:E1BNB3
Ensembl:ENSBTAT00000022416 GeneID:525944 KEGG:bta:525944
NextBio:20874271 Uniprot:E1BNB3
Length = 399
Score = 319 (117.4 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 61/95 (64%), Positives = 71/95 (74%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYL 412
PSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS YL
Sbjct: 227 PSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV-MYIHRQSAYL 285
Query: 413 FGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPD 447
GR RR+ADIP DHPSCSKQHAV Q+R VE + D
Sbjct: 286 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRAD 320
Score = 76 (31.8 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 26/137 (18%), Positives = 49/137 (35%)
Query: 119 SPSPRTRRLARARDEGDAERVTERDHERNNGRENGK-GKLGEXXXXXXXXXXXXXXKRLR 177
SPSP R G+ R R + + +G+ K K+ R
Sbjct: 53 SPSPPAGESGRPSHRGNRARGGSRSPAKKKNKSSGRRSKSPRSKRSRSPHHSAIKVKQER 112
Query: 178 RAHAEKDADKLTEKE---HERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTEREREN 234
H + + +E E +R SD++ H S +R + +R+ +N
Sbjct: 113 EDHPRRGREDRPHREPSGQEHKRARNSDRDRHRGHSHQRRSSGERPGSGQPQGRDRDAQN 172
Query: 235 DHSRASDKDIHRERVSE 251
++ ++++ H R E
Sbjct: 173 LQAQEAEREFHNTRRRE 189
Score = 73 (30.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 32/118 (27%), Positives = 46/118 (38%)
Query: 41 RSSHRGS-------SPAREKERHSSR-AKSPKRAQXXXXXXXXXXXXXXXXXXXXDEREL 92
R SHRG+ SPA++K + S R +KSP+ + RE
Sbjct: 63 RPSHRGNRARGGSRSPAKKKNKSSGRRSKSPRSKRSRSPHHSAIKVKQEREDHPRRGRED 122
Query: 93 GKVTERE-QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEG---DAERVTERDHER 146
E QE +R SDR H G S R + +G DA+ + ++ ER
Sbjct: 123 RPHREPSGQEHKRARNSDRDRHRGHSHQRRSSGERPGSGQPQGRDRDAQNLQAQEAER 180
Score = 59 (25.8 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 24/133 (18%), Positives = 46/133 (34%)
Query: 90 RELGKVTEREQERNHSRKSDRGTH----IGKSSSPSPRTRRLARARDEGDAE---RVTER 142
++ K + R + S++S H + + PR R R E + R
Sbjct: 80 KKKNKSSGRRSKSPRSKRSRSPHHSAIKVKQEREDHPRRGREDRPHREPSGQEHKRARNS 139
Query: 143 DHERNNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSD 202
D +R+ G + + GE + L+ AE++ +EH + + ++
Sbjct: 140 DRDRHRGHSHQRRSSGERPGSGQPQGRDRDAQNLQAQEAEREFHNTRRREHRQKNEVSAG 199
Query: 203 KEAHLPVSRSPSP 215
A P P
Sbjct: 200 SNASQDALPRPGP 212
Score = 56 (24.8 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 25/113 (22%), Positives = 39/113 (34%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
++SS R S R K S + K Q E + + ++R+
Sbjct: 83 NKSSGRRSKSPRSKRSRSPHHSAIKVKQEREDHPRRGREDRPHREPSGQEHKRARNSDRD 142
Query: 100 QERNHS-RKSDRGTHIGKSSSPSPRTR---RLARARDEGDAERVTERDHERNN 148
+ R HS ++ G G S P R R L E + R+H + N
Sbjct: 143 RHRGHSHQRRSSGERPG-SGQPQGRDRDAQNLQAQEAEREFHNTRRREHRQKN 194
Score = 52 (23.4 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 178 RAHAEKDADKLTEKEHERNHSRTSDKEAH--LPVSRSPSPHTKRLRRADAKVTEREREND 235
R+ A+K +K + + + S+ S H + V + H +R R +E+
Sbjct: 76 RSPAKKK-NKSSGRRSKSPRSKRSRSPHHSAIKVKQEREDHPRRGREDRPHREPSGQEHK 134
Query: 236 HSRASDKDIHRERVSERET 254
+R SD+D HR +R +
Sbjct: 135 RARNSDRDRHRGHSHQRRS 153
>FB|FBgn0039943 [details] [associations]
symbol:CG17168 species:7227 "Drosophila melanogaster"
[GO:0004864 "protein phosphatase inhibitor activity" evidence=ISS]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 Gene3D:2.60.200.20 SUPFAM:SSF49879 EMBL:CM000460
eggNOG:NOG271234 KO:K13108 GeneTree:ENSGT00670000098011 OMA:RENNDIH
EMBL:AY070586 RefSeq:NP_001015254.1 UniGene:Dm.6367 SMR:Q9W5Q1
DIP:DIP-22590N MINT:MINT-282836 EnsemblMetazoa:FBtr0113730
GeneID:3354996 KEGG:dme:Dmel_CG17168 UCSC:CG17168-RA
FlyBase:FBgn0039943 InParanoid:Q9W5Q1 OrthoDB:EOG4ZS7K9
GenomeRNAi:3354996 NextBio:850027 Uniprot:Q9W5Q1
Length = 421
Score = 297 (109.6 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 60/119 (50%), Positives = 79/119 (66%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYL 412
P+F LSG L +TN+ GV + ++EPP+ARKP RWRLY FK GE L+IHRQSC+L
Sbjct: 246 PNFGLSGALTEDTNKLNGVVVKYSEPPEARKPKRRWRLYPFK-GETALPTLHIHRQSCFL 304
Query: 413 FGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPDAASMYYCMRTRM----IDWHQGTF 467
GR+R+V D+ DHPSCSKQHA +Q+R V E+ D + + R R+ +D GTF
Sbjct: 305 VGRDRKVVDLAVDHPSCSKQHAALQYRLVPFEREDGS---HGKRVRLYLIDLDSANGTF 360
Score = 83 (34.3 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 50/203 (24%), Positives = 74/203 (36%)
Query: 42 SSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQE 101
SS SS +K HSS SP R Q E+ ++T ++
Sbjct: 44 SSSSDSSNESKKSNHSSL--SPNRKQRTAGKRQRDSSQS-------QEKRHKQLTHPSED 94
Query: 102 RNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXX 161
+ R S S R RR R+R +ER +RD ERN R+ E
Sbjct: 95 VHEQRSKWDSPERSNSHRNSTRQRRNTRSRSRERSERERDRDCERNKERDYNMQSSKE-- 152
Query: 162 XXXXXXXXXXXXKRLRRAHAEKDADKLTE-KEHERNHSRTSDKEAHLPVSRSPSPHTKRL 220
R +R+ A + + +E K ER+ R + PV RS SP +
Sbjct: 153 -------------RWQRSPALRHRSRSSERKNRERDRQRRPTERR--PVRRSQSPRDRCH 197
Query: 221 --RRADAKVTERERENDHSRASD 241
R D + +R N+ ++ D
Sbjct: 198 GGRDLDQRRQRNQRHNNSNKNED 220
Score = 69 (29.3 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 24/155 (15%), Positives = 54/155 (34%)
Query: 98 REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKL 157
+++ + H + R H G + + + + A+ + D + + N
Sbjct: 3 KQRNKEHELEQQRTGHEGDTKMSDRNLSKTKKIKQRATADSSSSSDSSNESKKSNHSSLS 62
Query: 158 GEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHT 217
+ + H K +E HE+ S + ++ R+ +
Sbjct: 63 PNRKQRTAGKRQRDSSQSQEKRH--KQLTHPSEDVHEQRSKWDSPERSNS--HRNSTRQR 118
Query: 218 KRLRRADAKVTERERENDHSRASDKDIHRERVSER 252
+ R + +ERER+ D R ++D + + ER
Sbjct: 119 RNTRSRSRERSERERDRDCERNKERDYNMQSSKER 153
Score = 49 (22.3 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 35/183 (19%), Positives = 65/183 (35%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+S+H SP R++ R + ++Q ++R ER
Sbjct: 55 KSNHSSLSPNRKQRTAGKRQRDSSQSQEKRHKQLTHPSEDVH-----EQRSKWDSPERSN 109
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENG------- 153
+S + R T +S S R R RD D ER ERD+ + +E
Sbjct: 110 SHRNSTRQRRNT---RSRS----RERSERERDR-DCERNKERDYNMQSSKERWQRSPALR 161
Query: 154 -KGKLGEXXXXXXXXXXXXXXKR-LRRA-------HAEKDADKLTEKEHERNHSRTSDKE 204
+ + E +R +RR+ H +D D+ ++ N+S ++ +
Sbjct: 162 HRSRSSERKNRERDRQRRPTERRPVRRSQSPRDRCHGGRDLDQRRQRNQRHNNSNKNEDD 221
Query: 205 AHL 207
++
Sbjct: 222 HYV 224
>WB|WBGene00016323 [details] [associations]
symbol:C32E8.5 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 SMART:SM00240
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:NOG271234
HOGENOM:HOG000264922 KO:K13108 OMA:YINESPI EMBL:FO080749
GeneTree:ENSGT00670000098011 PIR:T25596 RefSeq:NP_491217.1
ProteinModelPortal:P91125 SMR:P91125 STRING:P91125 PaxDb:P91125
EnsemblMetazoa:C32E8.5.1 EnsemblMetazoa:C32E8.5.2 GeneID:171946
KEGG:cel:CELE_C32E8.5 UCSC:C32E8.5.2 CTD:171946 WormBase:C32E8.5
InParanoid:P91125 NextBio:873359 Uniprot:P91125
Length = 299
Score = 305 (112.4 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 64/125 (51%), Positives = 82/125 (65%)
Query: 358 SGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRER 417
SG L +TN FRGV + +NEPP+A+KP+ RWRLY FK E L + LYIHRQS YL GR+
Sbjct: 136 SGALTEDTNTFRGVVIKYNEPPEAKKPNARWRLYPFKGEESL-QVLYIHRQSAYLIGRDH 194
Query: 418 RVADIPTDHPSCSKQHAVIQFRQVEKEQPDAASMYYCMRTRMIDWHQG--TFCM-KEV-P 473
++ADIP DHPSCSKQHAV+QFR + + D M +ID G TF K++ P
Sbjct: 195 KIADIPVDHPSCSKQHAVLQFRSMPFTRDDGTKARRIM-PYIIDLGSGNGTFLNEKKIEP 253
Query: 474 DFFLE 478
++E
Sbjct: 254 QRYIE 258
Score = 60 (26.2 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 88 DERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
D R + ER + R+ SR DR T SP+ +R + D + R +R
Sbjct: 8 DRRHRDRSPERRR-RSRSRSRDRQTRRDTRRDDSPKIKREVKEEQFSDNDSPRRRRDDRG 66
Query: 148 NGREN 152
R++
Sbjct: 67 GRRDD 71
Score = 59 (25.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 22/64 (34%), Positives = 29/64 (45%)
Query: 90 RELGKVTEREQERNHSRKSDRGTHIGK-SSSPSPRTRRLARA--RDEG-DAERVTERDHE 145
R + T R+ R+ S K R + S + SPR RR R RD+ D R RDH
Sbjct: 25 RSRDRQTRRDTRRDDSPKIKREVKEEQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRRDHR 84
Query: 146 RNNG 149
+ G
Sbjct: 85 DDRG 88
Score = 56 (24.8 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 190 EKEHERNHSRTSDKEAHLPVSRSPSPHTKR-LRRADAKVTERERENDHSRASDKDIHRER 248
+ +R H S + SRS T+R RR D+ +RE + + + SD D R R
Sbjct: 4 DSPRDRRHRDRSPERRRRSRSRSRDRQTRRDTRRDDSPKIKREVKEE--QFSDNDSPRRR 61
Query: 249 VSER 252
+R
Sbjct: 62 RDDR 65
Score = 47 (21.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 211 RSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERET 254
RSP + R+ + T R+ D S +++ E+ S+ ++
Sbjct: 14 RSPERRRRSRSRSRDRQTRRDTRRDDSPKIKREVKEEQFSDNDS 57
Score = 43 (20.2 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
++R H +S +S S +TRR R D +R + + +N
Sbjct: 7 RDRRHRDRSPERRRRSRSRSRDRQTRRDTRRDDSPKIKREVKEEQFSDN 55
>UNIPROTKB|I3LQU1 [details] [associations]
symbol:SNIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=IEA] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0007249 GO:GO:0035196
GeneTree:ENSGT00670000098011 Ensembl:ENSSSCT00000025221 OMA:VELLHIQ
Uniprot:I3LQU1
Length = 261
Score = 319 (117.4 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 61/95 (64%), Positives = 71/95 (74%)
Query: 353 PSFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYL 412
PSFELSG L +TN FRGV + ++EPP+AR P RWRLY FK E+L +YIHRQS YL
Sbjct: 89 PSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV-MYIHRQSAYL 147
Query: 413 FGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPD 447
GR RR+ADIP DHPSCSKQHAV Q+R VE + D
Sbjct: 148 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRAD 182
Score = 44 (20.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
H +R R +E+ +R SD+D HR +R GS
Sbjct: 7 HPRRGREDRPHREPSGQEHKRARNSDRDRHRSHSHQRR-GS 46
Score = 41 (19.5 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 14/54 (25%), Positives = 20/54 (37%)
Query: 202 DKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETG 255
++E H R PH R + +R R +D R R +ER G
Sbjct: 3 EREDHPRRGREDRPH----REPSGQEHKRARNSDRDRHRSHSHQRRGSNERPGG 52
Score = 41 (19.5 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 15/59 (25%), Positives = 19/59 (32%)
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLA----RARDEGDAERVTERDHERNNGRENGK 154
QE +R SDR H S R + RD A ++ R G K
Sbjct: 23 QEHKRARNSDRDRHRSHSHQRRGSNERPGGGQPQGRDRASAGNTSQDSLARPGGNNKDK 81
Score = 38 (18.4 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARA 130
E + + ++R++ R+HS + RG++ + P+ R A A
Sbjct: 24 EHKRARNSDRDRHRSHSHQR-RGSN-ERPGGGQPQGRDRASA 63
>ASPGD|ASPL0000037677 [details] [associations]
symbol:fhdA species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498
PROSITE:PS50006 SMART:SM00240 EMBL:BN001306 Gene3D:2.60.200.20
SUPFAM:SSF49879 EMBL:AACD01000051 eggNOG:NOG271234 KO:K13108
OrthoDB:EOG4D567C RefSeq:XP_660497.1 ProteinModelPortal:Q5B987
EnsemblFungi:CADANIAT00010196 GeneID:2874037 KEGG:ani:AN2893.2
HOGENOM:HOG000197771 OMA:RENNDIH Uniprot:Q5B987
Length = 351
Score = 259 (96.2 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 56/97 (57%), Positives = 69/97 (71%)
Query: 353 PSFELSGKLAAETNRF--RG--VTLLFNEPPDARKPSVR--WRLYVFKAGEMLKEPLYIH 406
P+F +G+LAAE+N G V L ++EPP+ARKP + WRLYVFK GE L E + ++
Sbjct: 193 PNFANTGRLAAESNAVTVNGDTVVLKYHEPPEARKPPPKESWRLYVFK-GEDLLEMVELN 251
Query: 407 RQSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVEK 443
+SC+L GRER V D P DHPSCSKQHA IQFR VEK
Sbjct: 252 ERSCWLIGRERLVVDFPLDHPSCSKQHAAIQFRFVEK 288
Score = 74 (31.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 32/154 (20%), Positives = 51/154 (33%)
Query: 3 RNLSNHSESPVRDQGGXXXXXXXXXXXXXXXXXXXVLHRSSHRGSSPAREKERHSSRAKS 62
R S++S+SP RD+ H+SSH+G R SSR
Sbjct: 14 RRRSSNSQSPDRDRDRDSRRRRHRHDDYDYDNSSRRHHQSSHKGGPRRRSSRSPSSRISH 73
Query: 63 PKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHSRKSDRGTHIGKSSSPSP 122
K + +L R+++++ R+ DR + S
Sbjct: 74 RKEYERRDPERSGRTDADEDRRRLHHSPDLPDRRHRDRDQDRDRERDRARERDRYREHSH 133
Query: 123 RTRRLARARDEGDAERVTERDHERNNGRENGKGK 156
R R R R + + R +R H R R +
Sbjct: 134 RHSRQHRIRSKSRS-RSPKR-HSRTPSRSRAPAR 165
Score = 73 (30.8 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 31/144 (21%), Positives = 61/144 (42%)
Query: 89 ERELGKVTEREQERNHSRKSDRGT--HIGKSSSPSPRTRRLARARDEGDAERVTER-DHE 145
+R+ + + R + R+ D + H S PR RR +R+ + R++ R ++E
Sbjct: 24 DRDRDRDSRRRRHRHDDYDYDNSSRRHHQSSHKGGPR-RRSSRS----PSSRISHRKEYE 78
Query: 146 RNNGRENGKGKLGEXXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKEHERNHSRTSDKE 204
R + +G+ E + R R +++ D+ E++ R HS ++
Sbjct: 79 RRDPERSGRTDADEDRRRLHHSPDLPDRRHRDRDQDRDRERDRARERDRYREHSHRHSRQ 138
Query: 205 AHLPV---SRSPSPHTKRLRRADA 225
+ SRSP H++ R+ A
Sbjct: 139 HRIRSKSRSRSPKRHSRTPSRSRA 162
Score = 64 (27.6 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 29/136 (21%), Positives = 49/136 (36%)
Query: 120 PSPRTR-RLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXXXXXXXXXXXXKRLRR 178
P+PR L R R + +RD +R++ R + + RR
Sbjct: 2 PTPREDDNLDRRRRRSSNSQSPDRDRDRDSRRRRHRHDDYDYDNSSRRHHQSSHKGGPRR 61
Query: 179 AHAEKDADKLTE-KEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHS 237
+ + +++ KE+ER S + +RL + R R+ D
Sbjct: 62 RSSRSPSSRISHRKEYERRDPERSGRT-------DADEDRRRLHHSPDLPDRRHRDRDQD 114
Query: 238 RASDKDIHRERVSERE 253
R ++D RER RE
Sbjct: 115 RDRERDRARERDRYRE 130
Score = 63 (27.2 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 37/158 (23%), Positives = 56/158 (35%)
Query: 96 TEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARAR-DEGDAERVTERDHERNNGRENGK 154
T RE + N R+ R ++ R R R R D+ D + + R H+ ++ + G
Sbjct: 3 TPREDD-NLDRRRRRSSNSQSPDRDRDRDSRRRRHRHDDYDYDNSSRRHHQSSH--KGGP 59
Query: 155 GKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPS 214
+ +R DAD+ + H HS LP R
Sbjct: 60 RRRSSRSPSSRISHRKEYERRDPERSGRTDADEDRRRLH---HS------PDLPDRRHRD 110
Query: 215 PHTKRLRRADAKVTERERENDHSRASDKDIHRERVSER 252
R R D + ER+R +HS + HR R R
Sbjct: 111 RDQDRDRERD-RARERDRYREHSHRHSRQ-HRIRSKSR 146
>UNIPROTKB|G4NE11 [details] [associations]
symbol:MGG_00849 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 EMBL:CM001235 Gene3D:2.60.200.20 SUPFAM:SSF49879
KO:K13108 RefSeq:XP_003718130.1 ProteinModelPortal:G4NE11
EnsemblFungi:MGG_00849T0 GeneID:2674370 KEGG:mgr:MGG_00849
Uniprot:G4NE11
Length = 341
Score = 223 (83.6 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 49/98 (50%), Positives = 68/98 (69%)
Query: 353 PSFELSGKLAAETNRFR---G--VTLLFNEPPDARKPSVR--WRLYVFKAGEMLKEPLYI 405
P++ +G LAA +N + G +TL ++EPP+ARKP R WRL+VFK G+ L + + +
Sbjct: 183 PNYGATGVLAAASNSVQQADGTTITLKYHEPPEARKPPARDDWRLFVFK-GDDLVDTIPL 241
Query: 406 HRQSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVEK 443
+SC+L GR+ VAD+ +HPS SKQHAVIQFR VEK
Sbjct: 242 ASRSCWLVGRDAAVADLLAEHPSVSKQHAVIQFRHVEK 279
Score = 65 (27.9 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 29/115 (25%), Positives = 42/115 (36%)
Query: 45 RGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNH 104
RG S R++ H R++SP+ D R ER R
Sbjct: 46 RGGSRERKRHDHHRRSRSPE------------DRGHRRRSRDRDSRRTYDDKERRSRRRR 93
Query: 105 SRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
D GK +TRR R+R GD R ++RD +R R+ + + E
Sbjct: 94 DDSDDDDFSNGKRKDR--KTRR--RSRSRGDTARSSKRDSDRKK-RDGSRSRRKE 143
Score = 60 (26.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 185 ADKLTEKE-HERNHSRTSDKEAHLPVSR-SPSPHTKRLRRADAKVTERERE-NDH---SR 238
+D+ E++ H R D E SR + H R D + RER+ +DH SR
Sbjct: 3 SDEAAERQSHRRRRDDHDDHERDRHRSRRQKTRHDDSDREIDRRGGSRERKRHDHHRRSR 62
Query: 239 ASDKDIHRERVSERET 254
+ + HR R +R++
Sbjct: 63 SPEDRGHRRRSRDRDS 78
Score = 57 (25.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 31/151 (20%), Positives = 54/151 (35%)
Query: 99 EQERNHSRKSDRGTHI-GKSSSPSPRTRR--LARARDEGDAERVTER-DHERNNGRENGK 154
E++ + R+ D H + S +TR R D R +R DH R + +
Sbjct: 8 ERQSHRRRRDDHDDHERDRHRSRRQKTRHDDSDREIDRRGGSRERKRHDHHRRSRSPEDR 67
Query: 155 GKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPS 214
G +R RR + D D + + + +R + SR +
Sbjct: 68 GHRRRSRDRDSRRTYDDKERRSRRRRDDSDDDDFSNGKRKDRKTRRRSR------SRGDT 121
Query: 215 PHTKRLRRADAKVTERERENDHSRASDKDIH 245
+ + R +D K +R+ SR + D H
Sbjct: 122 ARSSK-RDSDRK----KRDGSRSRRKEDDEH 147
>TAIR|locus:2061052 [details] [associations]
symbol:AT2G24410 "AT2G24410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:NOG271234 EMBL:AC006403 IPI:IPI00527635 PIR:C84636
RefSeq:NP_180017.1 UniGene:At.66240 ProteinModelPortal:Q9ZQ27
SMR:Q9ZQ27 DNASU:816977 EnsemblPlants:AT2G24410.1 GeneID:816977
KEGG:ath:AT2G24410 TAIR:At2g24410 InParanoid:Q9ZQ27
PhylomeDB:Q9ZQ27 ProtClustDB:CLSN2683036 ArrayExpress:Q9ZQ27
Genevestigator:Q9ZQ27 Uniprot:Q9ZQ27
Length = 78
Score = 232 (86.7 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 45/65 (69%), Positives = 50/65 (76%)
Query: 355 FELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFG 414
FELS KLA ETN ++G+TLLFN P D RKP RWRLY FK GE LKE L IH Q CYLFG
Sbjct: 10 FELSRKLAEETNIYKGITLLFNNPVDNRKPKERWRLYHFKDGEPLKETLCIHYQICYLFG 69
Query: 415 RERRV 419
RER++
Sbjct: 70 RERKI 74
>DICTYBASE|DDB_G0280133 [details] [associations]
symbol:DDB_G0280133 "CAMKL family protein kinase
DDB_G0280133" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR000014
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR008984 InterPro:IPR011009 InterPro:IPR013767
InterPro:IPR017441 Pfam:PF00069 Pfam:PF00498 Pfam:PF00989
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50006 PROSITE:PS50011
PROSITE:PS50112 SMART:SM00091 SMART:SM00220 SMART:SM00240
InterPro:IPR001610 dictyBase:DDB_G0280133 GO:GO:0005524
GO:GO:0006355 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
HSSP:P06782 Gene3D:2.60.200.20 SUPFAM:SSF49879 EMBL:AAFI02000035
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 KO:K13108
RefSeq:XP_641261.1 ProteinModelPortal:Q54VU4
EnsemblProtists:DDB0231454 GeneID:8622393 KEGG:ddi:DDB_G0280133
InParanoid:Q54VU4 Uniprot:Q54VU4
Length = 1505
Score = 227 (85.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 46/103 (44%), Positives = 65/103 (63%)
Query: 371 VTLLFNEPPDARKPSVRWRLYVFKAGEMLKEPLYIHRQSCYLFGRERRVADIPTDHPSCS 430
+ L ++EP +A+ P+ +W LY FK + L + +Y+HR+ +LFGR R +ADIP DHPSCS
Sbjct: 1360 IKLKWHEPAEAKLPTEKWMLYPFKGKDQL-DTIYLHRKKSFLFGRNRDIADIPIDHPSCS 1418
Query: 431 KQHAVIQFRQVEKEQPDAASMYYCMRTRMIDWHQ--GTFCMKE 471
QHAVI FR +KE P+ S+ + +ID GTF E
Sbjct: 1419 SQHAVIVFRIRKKENPNTGSIKTFILPYIIDLESTNGTFLKGE 1461
Score = 57 (25.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 21/105 (20%), Positives = 37/105 (35%)
Query: 116 KSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXXXXXXXXXXXXKR 175
K S ++ + RD + ++ NN + + + K+
Sbjct: 429 KEHRHSKEKKKRKKDRDHNNNNNNNNNNNNNNNEQTSDSSDSSDSDSESRSKKKRSSKKK 488
Query: 176 LRRAHAEKDA-DKLTEKE---HERNHSRTSDKEAHLPVSRSPSPH 216
RR + D+ D TE H++N S S + S S +PH
Sbjct: 489 SRRDDSSSDSSDSETESSSSPHKKNRSSNSSSNS----SHSNAPH 529
Score = 55 (24.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 23/110 (20%), Positives = 43/110 (39%)
Query: 138 RVTERDHERNNG----RENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEH 193
RV +D ++N G EN GK + K+ ++ + + +
Sbjct: 398 RVYGKDKDKNGGGGGTTENKDGKQLDTIKESKEHRHSKEKKKRKKDRDHNNNNNNNNNNN 457
Query: 194 ERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKD 243
N+ +TSD S S S + +R+ K + R++ S +SD +
Sbjct: 458 NNNNEQTSDSSDS---SDSDSESRSKKKRSSKK--KSRRDDSSSDSSDSE 502
Score = 48 (22.0 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 97 EREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGREN 152
E+ + + S SD + K S ++RR + D D+E + + N N
Sbjct: 462 EQTSDSSDSSDSDSESRSKKKRSSKKKSRRDDSSSDSSDSETESSSSPHKKNRSSN 517
Score = 42 (19.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 94 KVTEREQERNHSRKSDRGTHIGKSSSPS-------PRTRRLARAR--DEGDAERVTERDH 144
K+++R+ N RKS+ G K + S +RL + EGD R
Sbjct: 1200 KMSKRDNSYN-KRKSEDGDSYKKRDNQSYDDILKDEGNKRLRELQTYSEGDKSRQHYNRD 1258
Query: 145 ERNNGRENGK 154
+N R+N +
Sbjct: 1259 SNDNSRDNNR 1268
Score = 41 (19.5 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 17/103 (16%), Positives = 40/103 (38%)
Query: 138 RVTERDHERNNGR-ENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERN 196
++++RD+ N + E+G KRLR + DK + + +
Sbjct: 1200 KMSKRDNSYNKRKSEDGDSYKKRDNQSYDDILKDEGNKRLRELQTYSEGDKSRQHYNRDS 1259
Query: 197 HSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTEREREN-DHSR 238
+ + D + + + ++ R D + + + EN D+ +
Sbjct: 1260 NDNSRDNNRYNNRDNNNNNNSNNNRERD-RYKKNKNENFDYGK 1301
Score = 39 (18.8 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 135 DAERVTERDHERNNGRENGK 154
D R RD+ NN N +
Sbjct: 1265 DNNRYNNRDNNNNNNSNNNR 1284
Score = 38 (18.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 131 RDEGDAERVTERDHERNNGREN 152
RD D R R + R+N N
Sbjct: 1257 RDSNDNSRDNNRYNNRDNNNNN 1278
Score = 37 (18.1 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 6/57 (10%), Positives = 21/57 (36%)
Query: 192 EHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRER 248
+H H + ++ H P + H ++ + +++ + H+++
Sbjct: 975 QHSPQHQQHQHQQQHSPQQQQHQQHQHHQQQQQQLQQQHHQQHHQQHQQHQQQHQQQ 1031
Score = 37 (18.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 183 KDADKLTEKEHERNHSRTSDKEAH 206
K+ L H ++HS +K H
Sbjct: 153 KNVSALMPSPHAKSHSEYIEKNYH 176
>GENEDB_PFALCIPARUM|PF13_0042 [details] [associations]
symbol:PF13_0042 "fork head domain protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 PROSITE:PS50006 SMART:SM00240 GO:GO:0005634
Gene3D:2.60.200.20 SUPFAM:SSF49879 EMBL:AL844509 KO:K13108
RefSeq:XP_001349805.1 ProteinModelPortal:Q8IEN7 IntAct:Q8IEN7
MINT:MINT-1751032 EnsemblProtists:PF13_0042:mRNA GeneID:814021
KEGG:pfa:PF13_0042 EuPathDB:PlasmoDB:PF3D7_1307800 OMA:DKHNKYD
Uniprot:Q8IEN7
Length = 561
Score = 177 (67.4 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 41/94 (43%), Positives = 56/94 (59%)
Query: 354 SFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEP---LYIHRQSC 410
+F SG LA E G+ + + E DA KP +WRLY+FK EP L+IH +S
Sbjct: 415 NFNPSGLLAQEKIYKNGIEMKYTESIDAEKPDKKWRLYMFKDSNN-NEPQKILHIHDKSY 473
Query: 411 YLFGRERRVADIPTDHPSCSKQHAVIQFRQVEKE 444
YL G+E+ DI ++ S SKQHAVIQF++ E +
Sbjct: 474 YLIGKEQLAVDIQLNNISISKQHAVIQFKKHESK 507
Score = 56 (24.8 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 182 EKDADKLTEKEHERNHSRTS---DKEAHLPVSR-SPSPHTKR-----LRRADAKVTERER 232
+K+ + + EKE+++N S S +K+ + + H R ++R K E+E
Sbjct: 322 KKNDNNINEKEYDKNRSSISHYHNKDKYNKYDKYGKQNHNIRYNEQDIKRKSTKHYEKEN 381
Query: 233 ENDHSRASDKDIHRERVSERE 253
N+ + +K+ E SE E
Sbjct: 382 FNNTHKGKNKNEKDEEQSEEE 402
Score = 41 (19.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 95 VTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARAR-DEGDAERVTERDHERNNGRENG 153
+ E+E ++N S S K + ++ R +E D +R + + +E+ N
Sbjct: 328 INEKEYDKNRSSISHYHNK-DKYNKYDKYGKQNHNIRYNEQDIKRKSTKHYEKENFNNTH 386
Query: 154 KGK 156
KGK
Sbjct: 387 KGK 389
Score = 40 (19.1 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 103 NHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGK 156
NH K +I + S T R ++++ E D+ D +RNN + + + K
Sbjct: 56 NHVNKKSIKENINEIS-----TNR-SQSKKEKDSNEDMYNDKKRNNYKSSSESK 103
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 17/79 (21%), Positives = 31/79 (39%)
Query: 174 KRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERE 233
K R +K DK+ + H+RTS ++ +KR R +T + E
Sbjct: 222 KHDRHDKYDKQMDKIYILKKSSEHTRTSKDNSYYD--------SKRKYR---NITSEDEE 270
Query: 234 NDHSRASDKDIHRERVSER 252
H + D + ++ S +
Sbjct: 271 MKHHKTVDHNARKKSKSSK 289
Score = 38 (18.4 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 42 SSHRGSSPAREKERHSSRAKSPKRAQ 67
++H+G + + E S K K Q
Sbjct: 384 NTHKGKNKNEKDEEQSEEEKEKKNVQ 409
Score = 37 (18.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 8/52 (15%), Positives = 27/52 (51%)
Query: 97 EREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
+R+ +++ +++ TH GK+ + + + +E + + V +++ + N
Sbjct: 370 KRKSTKHYEKENFNNTHKGKNKNEKDEEQ----SEEEKEKKNVQKKETQNFN 417
Score = 37 (18.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 12/59 (20%), Positives = 25/59 (42%)
Query: 185 ADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKD 243
AD ++ + ++ S KE +S + S K + +++R N S + K+
Sbjct: 46 ADSSNSYRYDNHVNKKSIKENINEISTNRSQSKKEKDSNEDMYNDKKRNNYKSSSESKE 104
>UNIPROTKB|Q8IEN7 [details] [associations]
symbol:PF13_0042 "Fork head domain protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498
PROSITE:PS50006 SMART:SM00240 GO:GO:0005634 Gene3D:2.60.200.20
SUPFAM:SSF49879 EMBL:AL844509 KO:K13108 RefSeq:XP_001349805.1
ProteinModelPortal:Q8IEN7 IntAct:Q8IEN7 MINT:MINT-1751032
EnsemblProtists:PF13_0042:mRNA GeneID:814021 KEGG:pfa:PF13_0042
EuPathDB:PlasmoDB:PF3D7_1307800 OMA:DKHNKYD Uniprot:Q8IEN7
Length = 561
Score = 177 (67.4 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 41/94 (43%), Positives = 56/94 (59%)
Query: 354 SFELSGKLAAETNRFRGVTLLFNEPPDARKPSVRWRLYVFKAGEMLKEP---LYIHRQSC 410
+F SG LA E G+ + + E DA KP +WRLY+FK EP L+IH +S
Sbjct: 415 NFNPSGLLAQEKIYKNGIEMKYTESIDAEKPDKKWRLYMFKDSNN-NEPQKILHIHDKSY 473
Query: 411 YLFGRERRVADIPTDHPSCSKQHAVIQFRQVEKE 444
YL G+E+ DI ++ S SKQHAVIQF++ E +
Sbjct: 474 YLIGKEQLAVDIQLNNISISKQHAVIQFKKHESK 507
Score = 56 (24.8 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 182 EKDADKLTEKEHERNHSRTS---DKEAHLPVSR-SPSPHTKR-----LRRADAKVTERER 232
+K+ + + EKE+++N S S +K+ + + H R ++R K E+E
Sbjct: 322 KKNDNNINEKEYDKNRSSISHYHNKDKYNKYDKYGKQNHNIRYNEQDIKRKSTKHYEKEN 381
Query: 233 ENDHSRASDKDIHRERVSERE 253
N+ + +K+ E SE E
Sbjct: 382 FNNTHKGKNKNEKDEEQSEEE 402
Score = 41 (19.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 95 VTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARAR-DEGDAERVTERDHERNNGRENG 153
+ E+E ++N S S K + ++ R +E D +R + + +E+ N
Sbjct: 328 INEKEYDKNRSSISHYHNK-DKYNKYDKYGKQNHNIRYNEQDIKRKSTKHYEKENFNNTH 386
Query: 154 KGK 156
KGK
Sbjct: 387 KGK 389
Score = 40 (19.1 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 103 NHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGK 156
NH K +I + S T R ++++ E D+ D +RNN + + + K
Sbjct: 56 NHVNKKSIKENINEIS-----TNR-SQSKKEKDSNEDMYNDKKRNNYKSSSESK 103
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 17/79 (21%), Positives = 31/79 (39%)
Query: 174 KRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERE 233
K R +K DK+ + H+RTS ++ +KR R +T + E
Sbjct: 222 KHDRHDKYDKQMDKIYILKKSSEHTRTSKDNSYYD--------SKRKYR---NITSEDEE 270
Query: 234 NDHSRASDKDIHRERVSER 252
H + D + ++ S +
Sbjct: 271 MKHHKTVDHNARKKSKSSK 289
Score = 38 (18.4 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 42 SSHRGSSPAREKERHSSRAKSPKRAQ 67
++H+G + + E S K K Q
Sbjct: 384 NTHKGKNKNEKDEEQSEEEKEKKNVQ 409
Score = 37 (18.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 8/52 (15%), Positives = 27/52 (51%)
Query: 97 EREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
+R+ +++ +++ TH GK+ + + + +E + + V +++ + N
Sbjct: 370 KRKSTKHYEKENFNNTHKGKNKNEKDEEQ----SEEEKEKKNVQKKETQNFN 417
Score = 37 (18.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 12/59 (20%), Positives = 25/59 (42%)
Query: 185 ADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKD 243
AD ++ + ++ S KE +S + S K + +++R N S + K+
Sbjct: 46 ADSSNSYRYDNHVNKKSIKENINEISTNRSQSKKEKDSNEDMYNDKKRNNYKSSSESKE 104
>UNIPROTKB|Q8WXA9 [details] [associations]
symbol:SREK1 "Splicing regulatory glutamine/lysine-rich
protein 1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005739 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003676 eggNOG:NOG277302 KO:K13165
EMBL:AF459094 EMBL:BC047322 EMBL:BC067770 EMBL:BC112343
IPI:IPI00103497 IPI:IPI00375462 RefSeq:NP_001070667.1
RefSeq:NP_001257421.1 RefSeq:NP_631907.1 UniGene:Hs.49367
UniGene:Hs.519347 ProteinModelPortal:Q8WXA9 SMR:Q8WXA9
IntAct:Q8WXA9 STRING:Q8WXA9 PhosphoSite:Q8WXA9 DMDM:37537968
PaxDb:Q8WXA9 PeptideAtlas:Q8WXA9 PRIDE:Q8WXA9
Ensembl:ENST00000334121 Ensembl:ENST00000380918 GeneID:140890
KEGG:hsa:140890 UCSC:uc003jun.3 UCSC:uc003juo.3 CTD:140890
GeneCards:GC05P065435 HGNC:HGNC:17882 HPA:HPA037674 MIM:609268
neXtProt:NX_Q8WXA9 PharmGKB:PA38255 HOVERGEN:HBG079174
InParanoid:Q8WXA9 OMA:EKEQDKD OrthoDB:EOG4K3KWS ChiTaRS:SREK1
GenomeRNAi:140890 NextBio:84548 ArrayExpress:Q8WXA9 Bgee:Q8WXA9
CleanEx:HS_SFRS12 Genevestigator:Q8WXA9 GermOnline:ENSG00000153914
Uniprot:Q8WXA9
Length = 508
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/168 (26%), Positives = 73/168 (43%)
Query: 89 ERELGKVTERE--QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER 146
E E GK ER+ + R+H+R R + KS S R++ R+R + R ++D R
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSS--SKSHSRRKRSQSKHRSRSH-NRSRSRQKDRRR 234
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ + K E K R EK+ K ++E ER + +KE
Sbjct: 235 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKE 294
Query: 207 LPVSRSPSPHTKRLRRADA-KVTERERENDHSRASDKDIHRERVSERE 253
++ ++ R D K ERERE +H + DK+ +E+ E+E
Sbjct: 295 RGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKE 342
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 61/233 (26%), Positives = 97/233 (41%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXX----DERELGKV 95
HRS S +R+K+R S++ KR++ E+E K
Sbjct: 217 HRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKE 276
Query: 96 TEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGREN-- 152
+RE+ER ++ ++ GK+ + R R +D E D ER E++HE++ +E
Sbjct: 277 KDREKEREREKEREKEKERGKNKDRD-KEREKDREKDKEKDREREREKEHEKDRDKEKEK 335
Query: 153 --GKGKLGEXXXXXXXXXXXXXXKRLR---RAHAEKDADKLTEKEHERNHSRTSDKEAHL 207
K K E K+ R R++ + + +E R SR+S +
Sbjct: 336 EQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRT 395
Query: 208 PV------SRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERET 254
SRSPSP ++ + D K RE+E DH S++ RER ER T
Sbjct: 396 SKTIKRKSSRSPSPRSRN--KKDKK---REKERDH--ISER---RER--ERST 436
Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 45/210 (21%), Positives = 74/210 (35%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+S+ R +R R SR+ S ++ +R K +++
Sbjct: 183 KSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKR 242
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARAR-DEGDAERVTERDHERNNGRENGKGK-LG 158
++ R+ R + R + + R E D E+ ER+ ER +E GK K
Sbjct: 243 SKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRD 302
Query: 159 EXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTK 218
+ +R R EKD DK EKE ++ R D+ + R K
Sbjct: 303 KEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD---K 359
Query: 219 RLRRADAKVTERERENDHSRASDKDIHRER 248
+ R R SR+S ++ R R
Sbjct: 360 KSRTPPRSYNASRR----SRSSSRERRRRR 385
>UNIPROTKB|E2R749 [details] [associations]
symbol:SREK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104035
EMBL:AAEX03001478 Ensembl:ENSCAFT00000012107 Uniprot:E2R749
Length = 510
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/170 (27%), Positives = 73/170 (42%)
Query: 89 ERELGKVTERE--QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER 146
E E GK ER+ + R+H+R R + KS S R++ R+R + R ++D R
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSS--SKSHSRRKRSQSKHRSRSH-NRSRSRQKDRRR 234
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ + K E K R EK+ K ++E ER R +KE
Sbjct: 235 SKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDREKERE 294
Query: 207 LPVSRSPSPHTKRLRRADA---KVTERERENDHSRASDKDIHRERVSERE 253
R + +R + D K ERER+ +H + DK+ +E+ E+E
Sbjct: 295 KEKERGKNKDKEREKDRDKDKEKDRERERDKEHDKERDKEKEKEQDKEKE 344
Score = 134 (52.2 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 45/220 (20%), Positives = 82/220 (37%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R R S R K R SS++ S ++ + K + +
Sbjct: 187 RKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSR 246
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGE 159
ER SR R K + + + + +D E + E+ +R+ ER +E GK K E
Sbjct: 247 ERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDKE 306
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKR 219
+ + H +K+ DK EKE ++ R D+ + R ++
Sbjct: 307 REKDRDKDKEKDRERERDKEH-DKERDKEKEKEQDKEKERDKDRSKEIDEKRKKDKKSRT 365
Query: 220 LRRA-----DAKVTERERENDHSRASDKDIHRERVSERET 254
R+ ++ + RER SR+S + + +R++
Sbjct: 366 PPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKS 405
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 52/223 (23%), Positives = 89/223 (39%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+ R SP +++ + R KS R++ +RE + ER++
Sbjct: 230 KDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDR 289
Query: 101 ERNHSRKSDRGTHIGKSSSPS---PRTRRLARARD-EGDAERVTERDHERNNGRENGKGK 156
E+ ++ +RG + K + + R RD E D ER E++ E++ +E K +
Sbjct: 290 EKEREKEKERGKNKDKEREKDRDKDKEKDRERERDKEHDKERDKEKEKEQDKEKERDKDR 349
Query: 157 LGEXXXXXXXXXXXXXXKRLRRA-HAEKDADKLTEKEHERNHSRT--SDKEAHLPVSRSP 213
E R A + + + + R+ SR+ + K SRSP
Sbjct: 350 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSP 409
Query: 214 SPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
SP ++ + D K RE+E DH S++ RER S S
Sbjct: 410 SPRSRN--KKDKK---REKERDH--ISERR-ERERSSSTRKSS 444
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 54/227 (23%), Positives = 87/227 (38%)
Query: 40 HRSSHRGSSPAREKER------HSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDER--E 91
HRS S +R+K+R H R+KS +R + ER E
Sbjct: 217 HRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKE 276
Query: 92 LGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGR 150
+ ERE+ER+ ++ ++ GK+ + R R +D E D ER +++H++ +
Sbjct: 277 KDREKEREKERDREKEREKEKERGKNKD---KEREKDRDKDKEKDRERERDKEHDKERDK 333
Query: 151 ENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVS 210
E K + E KR + + R+ SR + S
Sbjct: 334 EKEKEQDKEKERDKDRSKEIDE-KRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSS 392
Query: 211 RSPSPHTKRLRRADAKVTERER-ENDHSRASDKDIHRERVSERETGS 256
RSP R++ + R R + D R ++D ER ERE S
Sbjct: 393 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISER-RERERSS 438
>UNIPROTKB|J9P0H2 [details] [associations]
symbol:SREK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104035 KO:K13165 CTD:140890 OMA:EKEQDKD
EMBL:AAEX03001478 RefSeq:XP_544361.3 Ensembl:ENSCAFT00000044884
GeneID:487233 KEGG:cfa:487233 Uniprot:J9P0H2
Length = 626
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 46/170 (27%), Positives = 73/170 (42%)
Query: 89 ERELGKVTERE--QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER 146
E E GK ER+ + R+H+R R + KS S R++ R+R + R ++D R
Sbjct: 294 EPESGKSNERKGGRSRSHTRSKSRSS--SKSHSRRKRSQSKHRSRSH-NRSRSRQKDRRR 350
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ + K E K R EK+ K ++E ER R +KE
Sbjct: 351 SKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDREKERE 410
Query: 207 LPVSRSPSPHTKRLRRADA---KVTERERENDHSRASDKDIHRERVSERE 253
R + +R + D K ERER+ +H + DK+ +E+ E+E
Sbjct: 411 KEKERGKNKDKEREKDRDKDKEKDRERERDKEHDKERDKEKEKEQDKEKE 460
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/220 (20%), Positives = 82/220 (37%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R R S R K R SS++ S ++ + K + +
Sbjct: 303 RKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSR 362
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGE 159
ER SR R K + + + + +D E + E+ +R+ ER +E GK K E
Sbjct: 363 ERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDKE 422
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKR 219
+ + H +K+ DK EKE ++ R D+ + R ++
Sbjct: 423 REKDRDKDKEKDRERERDKEH-DKERDKEKEKEQDKEKERDKDRSKEIDEKRKKDKKSRT 481
Query: 220 LRRA-----DAKVTERERENDHSRASDKDIHRERVSERET 254
R+ ++ + RER SR+S + + +R++
Sbjct: 482 PPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKS 521
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 52/223 (23%), Positives = 89/223 (39%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+ R SP +++ + R KS R++ +RE + ER++
Sbjct: 346 KDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREKERDR 405
Query: 101 ERNHSRKSDRGTHIGKSSSPS---PRTRRLARARD-EGDAERVTERDHERNNGRENGKGK 156
E+ ++ +RG + K + + R RD E D ER E++ E++ +E K +
Sbjct: 406 EKEREKEKERGKNKDKEREKDRDKDKEKDRERERDKEHDKERDKEKEKEQDKEKERDKDR 465
Query: 157 LGEXXXXXXXXXXXXXXKRLRRA-HAEKDADKLTEKEHERNHSRT--SDKEAHLPVSRSP 213
E R A + + + + R+ SR+ + K SRSP
Sbjct: 466 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSP 525
Query: 214 SPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
SP ++ + D K RE+E DH S++ RER S S
Sbjct: 526 SPRSRN--KKDKK---REKERDH--ISERR-ERERSSSTRKSS 560
Score = 129 (50.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 54/227 (23%), Positives = 87/227 (38%)
Query: 40 HRSSHRGSSPAREKER------HSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDER--E 91
HRS S +R+K+R H R+KS +R + ER E
Sbjct: 333 HRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKIKEKERVKE 392
Query: 92 LGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGR 150
+ ERE+ER+ ++ ++ GK+ + R R +D E D ER +++H++ +
Sbjct: 393 KDREKEREKERDREKEREKEKERGKNKD---KEREKDRDKDKEKDRERERDKEHDKERDK 449
Query: 151 ENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVS 210
E K + E KR + + R+ SR + S
Sbjct: 450 EKEKEQDKEKERDKDRSKEIDE-KRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSS 508
Query: 211 RSPSPHTKRLRRADAKVTERER-ENDHSRASDKDIHRERVSERETGS 256
RSP R++ + R R + D R ++D ER ERE S
Sbjct: 509 RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISER-RERERSS 554
>ZFIN|ZDB-GENE-030131-6117 [details] [associations]
symbol:dido1 "death inducer-obliterator 1"
species:7955 "Danio rerio" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003618 InterPro:IPR017890 InterPro:IPR019787
Pfam:PF00628 Pfam:PF07500 PROSITE:PS50016 PROSITE:PS51321
SMART:SM00249 SMART:SM00510 ZFIN:ZDB-GENE-030131-6117 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.472.30
InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942
GeneTree:ENSGT00530000063844 EMBL:BX296530 EMBL:BX005175
IPI:IPI00971682 Ensembl:ENSDART00000110882 ArrayExpress:F1QQA3
Bgee:F1QQA3 Uniprot:F1QQA3
Length = 2779
Score = 155 (59.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 59/225 (26%), Positives = 91/225 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXD---ERELGKVTE 97
+ S RG R KE S R K +R + D E E GK +E
Sbjct: 2536 KESERGKESERGKE--SERGKESERGKEFDRGKESDRGKESDRGKESDRGKESERGKESE 2593
Query: 98 REQERNHSRKSDRGTHI--GKSSS---PSPRTRRLARARDEGDAERVTERDHERNNGREN 152
R +E + ++SDRG GK S S R + R + E D + ++R E + G+E+
Sbjct: 2594 RGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGK-ESDRGKESDRGKESDRGKES 2652
Query: 153 GKGKLGEXXXXXXXXXXXXXXK---RLRRAHAEKDADKLTEKEHERNHSRTSDKEAH-LP 208
+GK + + R R KD D+ K ER R D+++
Sbjct: 2653 DRGKESDKYGDGDKRRDRDRDRERERGREREDRKDHDRDRAKNREREKDRDRDRDSRDRR 2712
Query: 209 VSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
RS S R + D + +RER+ D + ++D R+R +E
Sbjct: 2713 RERSRSRERDRGKDRDRRDRDRERDKDRGKEKERD-RRDRSRSKE 2756
Score = 149 (57.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/213 (23%), Positives = 83/213 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R R S R++E+ SR K + ++ E E GK +ER +
Sbjct: 2490 RDRERDRSRERDREQGHSREKEREHSKERDRSRGRESDRGKESDRGK-ESERGKESERGK 2548
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
E ++S+RG + S R + R + E D + +ER E G+E+ +GK +
Sbjct: 2549 ESERGKESERGKEFDRGKE-SDRGKESDRGK-ESDRGKESERGKESERGKESDRGKESDR 2606
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRL 220
K R E D K +++ E + + SD+ + +
Sbjct: 2607 GKESDRGKESDRGKESDRGK-ESDRGKESDRGKESDRGKESDRGKESDRGKESDKYGDGD 2665
Query: 221 RRADAKVTERERENDHSRASDKDIHRERVSERE 253
+R D + +RERE R KD R+R RE
Sbjct: 2666 KRRD-RDRDRERERGREREDRKDHDRDRAKNRE 2697
Score = 145 (56.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 48/215 (22%), Positives = 89/215 (41%)
Query: 42 SSHRGSSPAREKER--HSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXD---ERELGKVT 96
S R S RE +R S R K +R + D E + GK +
Sbjct: 2515 SKERDRSRGRESDRGKESDRGKESERGKESERGKESERGKESERGKEFDRGKESDRGKES 2574
Query: 97 EREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGK 156
+R +E + ++S+RG + S R + R + E D + ++R E + G+E+ +GK
Sbjct: 2575 DRGKESDRGKESERGKE-SERGKESDRGKESDRGK-ESDRGKESDRGKESDRGKESDRGK 2632
Query: 157 LGEXXXXXXXXXXXXXXKRLRRA-HAEK--DADKLTEKEHERNHSRTSDKEAHLPVSRSP 213
+ K R ++K D DK +++ +R R ++E R
Sbjct: 2633 ESDRGKESDRGKESDRGKESDRGKESDKYGDGDKRRDRDRDRERERGREREDRKDHDRDR 2692
Query: 214 SPHTKRLRRADAKVTERERENDHSRASDKDIHRER 248
+ + +R + D R+R + SR+ ++D ++R
Sbjct: 2693 AKNREREKDRDRDRDSRDRRRERSRSRERDRGKDR 2727
Score = 145 (56.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 54/220 (24%), Positives = 87/220 (39%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXD---ERELGKVTE 97
R R +REKER S+ + R + + E E GK +E
Sbjct: 2498 RERDREQGHSREKEREHSKERDRSRGRESDRGKESDRGKESERGKESERGKESERGKESE 2557
Query: 98 REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKL 157
R +E + ++SDRG + S R + R + E + + ++R E + G+E+ +GK
Sbjct: 2558 RGKEFDRGKESDRGKESDRGKE-SDRGKESERGK-ESERGKESDRGKESDRGKESDRGKE 2615
Query: 158 GEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHT 217
+ K R E D K +++ E + + SDK R
Sbjct: 2616 SDRGKESDRGKESDRGKESDRGK-ESDRGKESDRGKESDRGKESDKYGDGDKRRDRDRDR 2674
Query: 218 KRLR---RADAKVTERERENDHSRASDKDIHRE-RVSERE 253
+R R R D K +R+R + R D+D R+ R RE
Sbjct: 2675 ERERGREREDRKDHDRDRAKNREREKDRDRDRDSRDRRRE 2714
Score = 142 (55.0 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 51/212 (24%), Positives = 85/212 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXD---ERELGKVTE 97
R S RG R KE S R K +R + D E + GK ++
Sbjct: 2524 RESDRGKESDRGKE--SERGKESERGKESERGKESERGKEFDRGKESDRGKESDRGKESD 2581
Query: 98 REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKL 157
R +E ++S+RG + S R + R + E D + ++R E + G+E+ +GK
Sbjct: 2582 RGKESERGKESERGKESDRGKE-SDRGKESDRGK-ESDRGKESDRGKESDRGKESDRGKE 2639
Query: 158 GEXXXXXXXXXXXXXXKRLRR-AHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPH 216
+ K + +K D+ ++E ER R D++ H R+ +
Sbjct: 2640 SDRGKESDRGKESDRGKESDKYGDGDKRRDRDRDRERERGRER-EDRKDH-DRDRAKNRE 2697
Query: 217 TKRLRRADAKVTERERENDHSRASDKDIHRER 248
++ R D +R RE SR D+ R+R
Sbjct: 2698 REKDRDRDRDSRDRRRERSRSRERDRGKDRDR 2729
Score = 136 (52.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 45/171 (26%), Positives = 73/171 (42%)
Query: 89 ERELGKVTEREQERNHSRKSDRGT-HIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
E E + ER++ER+ SR+ DR H + + R +R R E D + ++R E
Sbjct: 2481 EHEYDRSKERDRERDRSRERDREQGHSREKEREHSKERDRSRGR-ESDRGKESDRGKESE 2539
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTE--KEHERNHSRTSDKEA 205
G+E+ +GK E K R E D K ++ KE ER KE+
Sbjct: 2540 RGKESERGKESERGKESERGKEFDRGKESDRGK-ESDRGKESDRGKESERGKESERGKES 2598
Query: 206 HLPVSRSPSPHTKRLRRAD-AKVTERERENDHSRASDKDIHRERVSERETG 255
+ R + +D K ++R +E+D + SD+ +R E + G
Sbjct: 2599 DRGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRG 2649
Score = 124 (48.7 bits), Expect = 0.00090, P = 0.00089
Identities = 51/199 (25%), Positives = 76/199 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXD---ERELGKVTE 97
+ S RG R KE S R K R + D E + GK ++
Sbjct: 2584 KESERGKESERGKE--SDRGKESDRGKESDRGKESDRGKESDRGKESDRGKESDRGKESD 2641
Query: 98 REQERNHSRKSDRGTHIGK-SSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGK 156
R +E + ++SDRG K R R R R+ G ER +DH+R+ + + K
Sbjct: 2642 RGKESDRGKESDRGKESDKYGDGDKRRDRDRDRERERG-REREDRKDHDRDRAKNREREK 2700
Query: 157 LGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEA-HLPVSRSPSP 215
+ R R KD D+ +++ ER+ R +KE SRS
Sbjct: 2701 --DRDRDRDSRDRRRERSRSRERDRGKDRDR-RDRDRERDKDRGKEKERDRRDRSRSKER 2757
Query: 216 HTKRLRRAD---AKVTERE 231
R R++ AK T+ E
Sbjct: 2758 KDNRKERSESSRAKSTDSE 2776
>DICTYBASE|DDB_G0276577 [details] [associations]
symbol:fray2 "FRAY subfamily protein kinase"
species:44689 "Dictyostelium discoideum" [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
dictyBase:DDB_G0276577 GO:GO:0005524 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 GenomeReviews:CM000151_GR
EMBL:AAFI02000015 HSSP:Q13153 RefSeq:XP_643160.1
ProteinModelPortal:Q551H4 STRING:Q551H4 EnsemblProtists:DDB0229911
GeneID:8620567 KEGG:ddi:DDB_G0276577 KO:K08835 OMA:ATHISYL
Uniprot:Q551H4
Length = 1028
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 51/212 (24%), Positives = 84/212 (39%)
Query: 43 SHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQER 102
S +S + HSSR +S +++ D K + + R
Sbjct: 692 SSDSTSHTSSSDEHSSRYESDRKSYKKKKSSSSSSNSKRDRERERDRDRSNKTYKNSRSR 751
Query: 103 NHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGEXX 161
N SR +R S R R R RD E D +R +R +R+ RE + +
Sbjct: 752 NVSRDRERERDRHNRSRDRDRERERERDRDRERDRDRSRDRSRDRSRDRERDRSR----- 806
Query: 162 XXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSD-KEAHLPVSRSPSPHTKRL 220
R R E+D D+ ++ +R+ SR SD ++ SRS S + +R
Sbjct: 807 --DRSRDRDRSRDRSRDRSRERDRDRSRDRSRDRSRSRDSDSRDRSRDRSRSHS-NRRRS 863
Query: 221 RRADAKVTERERENDHSRASDKDIHRERVSER 252
R D++ R+R +D R+ D+ R+ S +
Sbjct: 864 RSRDSRNKSRDRSSDSDRSRDRSRDRDYKSSK 895
Score = 130 (50.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 48/216 (22%), Positives = 84/216 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R S R SS + + S + S + + +R+ ERE+
Sbjct: 681 RQSSRASSLSESSDSTSHTSSSDEHSSRYESDRKSYKKKKSSSSSSNSKRD----RERER 736
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTR-RLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
+R+ S K+ + + S R R R R+RD D ER ERD +R R+ + + +
Sbjct: 737 DRDRSNKTYKNSRSRNVSRDRERERDRHNRSRDR-DRERERERDRDRERDRDRSRDRSRD 795
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPV-SRSPSPHTK 218
+ R+ ++ D+ E++ +R+ R+ D+ SR S
Sbjct: 796 RSRDRERDRSRDRSRDRDRSR-DRSRDRSRERDRDRSRDRSRDRSRSRDSDSRDRSRDRS 854
Query: 219 RLRRADAKVTEREREN-DHSRASDKDIHRERVSERE 253
R + R+ N R+SD D R+R +R+
Sbjct: 855 RSHSNRRRSRSRDSRNKSRDRSSDSDRSRDRSRDRD 890
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 49/221 (22%), Positives = 88/221 (39%)
Query: 48 SPAREKERHS-SRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQER---- 102
SP+ +KE +S S++ K Q DE ++R+ +
Sbjct: 662 SPSSDKENNSTSKSNKSKSRQSSRASSLSESSDSTSHTSSSDEHSSRYESDRKSYKKKKS 721
Query: 103 -NHSRKSDRGTHIGKSSSPSPRTRRLARARDEG-DAERVTERD-HERNNGRENGKGKLGE 159
+ S S R + S +T + +R+R+ D ER ERD H R+ R+ + + +
Sbjct: 722 SSSSSNSKRDRERERDRDRSNKTYKNSRSRNVSRDRER--ERDRHNRSRDRDRERERERD 779
Query: 160 XXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTK 218
+ R R ++ D+ +++ R+ SR +E SR S
Sbjct: 780 RDRERDRDRSRDRSRDRSRDRERDRSRDRSRDRDRSRDRSRDRSRERDRDRSRDRSRDRS 839
Query: 219 RLRRADAKVTERERENDHS---RASDKDIHRERVSERETGS 256
R R +D++ R+R HS R+ +D R + +R + S
Sbjct: 840 RSRDSDSRDRSRDRSRSHSNRRRSRSRD-SRNKSRDRSSDS 879
>WB|WBGene00004704 [details] [associations]
symbol:rsp-7 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0040010
GO:GO:0002119 GO:GO:0016246 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0040011 GO:GO:0040017 GO:GO:0003723 GO:GO:0019915
GO:GO:0000398 EMBL:Z36948 GeneTree:ENSGT00700000104035 EMBL:Z49911
PIR:T20382 RefSeq:NP_741039.1 RefSeq:NP_741040.1
ProteinModelPortal:O01159 SMR:O01159 STRING:O01159 PaxDb:O01159
PRIDE:O01159 EnsemblMetazoa:D2089.1a GeneID:174646
KEGG:cel:CELE_D2089.1 UCSC:D2089.1b.1 CTD:174646 WormBase:D2089.1a
WormBase:D2089.1b eggNOG:NOG277302 InParanoid:O01159 KO:K13165
OMA:CAYAYVE NextBio:884894 Uniprot:O01159
Length = 452
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 45/158 (28%), Positives = 73/158 (46%)
Query: 88 DERELGKVTER-EQERN-HSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDH 144
DE+ LG++ E RN R R + SPSPR RR +R RD + D +R RD
Sbjct: 250 DEQALGEIEEAIRMGRNGDDRDRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDR 309
Query: 145 -----ERNNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSR 199
+R+ R+ + + + ++ R+ + K +++ ER+ SR
Sbjct: 310 RSRSRDRDRDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRSRDRRRRSKSRDRKRERSRSR 369
Query: 200 TSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHS 237
+ D++ SRS SP KR + D K ++E EN+ S
Sbjct: 370 SKDRKRDKKRSRSRSPE-KRRDKEDRKTEKKENENESS 406
>UNIPROTKB|E1C591 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0005634
GO:GO:0005737 GO:GO:0006457 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00550000074595 OMA:NKKFDHE
EMBL:AADN02020271 IPI:IPI00602148 Ensembl:ENSGALT00000015996
Uniprot:E1C591
Length = 747
Score = 146 (56.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 54/227 (23%), Positives = 85/227 (37%)
Query: 40 HRSSHRGSSPAR--EKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTE 97
H+SS + R EK+ +R+K+ KR + + K
Sbjct: 425 HKSSSKDRETRRNLEKDDKHNRSKTKKRGKSRSHSKSREKSRSKERDSKHSRHD-EKRRS 483
Query: 98 REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKL 157
R +ER+ + ++ H R+R R+R G R ERDH ++ RE K +
Sbjct: 484 RSKERDREKDREKEKHYDSRGRDKERSRSKERSRRAGS--RSNERDHRKSKDREKHKSRS 541
Query: 158 -------GEXXXXXXXXXXXXXXKRLRRAHAE-KDADKLTEKEHERNHSRTSDKEAHLPV 209
G+ R RR + +D D+ KE+ RN R S +
Sbjct: 542 REREHARGKHSSSSRTRERSKSRDRGRRGRSRSRDRDRSRSKEYSRNRDRESRRRRSRSR 601
Query: 210 SRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
R +P R R + R E + S++ + RER S RE+ S
Sbjct: 602 ERRGTPDRYRGRENRRRRNSRSSEREESQSRN----RERYSNRESRS 644
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 55/221 (24%), Positives = 95/221 (42%)
Query: 41 RSSHRGSSPAREKERH-SSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
RS R REKE+H SR + +R++ +ER+ K +RE
Sbjct: 484 RSKERDREKDREKEKHYDSRGRDKERSRSKERSRRAGSRS--------NERDHRKSKDRE 535
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
+ ++ SR+ + GK SS S RTR +++RD G R RD +R+ +E + + E
Sbjct: 536 KHKSRSREREHAR--GKHSSSS-RTRERSKSRDRGRRGRSRSRDRDRSRSKEYSRNRDRE 592
Query: 160 XXXXXXXXXXXXXXK-RLR-RAHAEKDADKLTEKEHE--RNHSRTSDKEAHLPVSRSPSP 215
R R R + + + +E+E RN R S++E+ R+ S
Sbjct: 593 SRRRRSRSRERRGTPDRYRGRENRRRRNSRSSEREESQSRNRERYSNRESRSSYKRNDS- 651
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
++R R + + + E+ + S +D R S++ S
Sbjct: 652 ESQRKRHSKSHESSSP-ESSKGKKSSRDQDRSPDSKKRPSS 691
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/216 (20%), Positives = 81/216 (37%)
Query: 41 RSSHRGSSPAREKERHS-SRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
R R +P+R + R R+++P + D+ E+ ++ +
Sbjct: 332 RGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSEINEIRKDN 391
Query: 100 QER-NHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDA-ERVTERDHERNNGRENGKGKL 157
Q+ R+ H S SPS R + + + + +R T R+ E+++ K K
Sbjct: 392 QKSPGRGRERKASDHRQVSESPSRRGEKEKKKDHKSSSKDRETRRNLEKDDKHNRSKTKK 451
Query: 158 GEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHT 217
K H+ D +K + ER+ + +KE H SR
Sbjct: 452 RGKSRSHSKSREKSRSKERDSKHSRHD-EKRRSRSKERDREKDREKEKHYD-SRGRDKER 509
Query: 218 KRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R + + R E DH ++ D++ H+ R ERE
Sbjct: 510 SRSKERSRRAGSRSNERDHRKSKDREKHKSRSRERE 545
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 47/223 (21%), Positives = 89/223 (39%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS+ R ++++E+H SR++ + A+ R + +R +
Sbjct: 522 RSNERDHRKSKDREKHKSRSREREHARGKHSSSSRTRERSKSRDRGRRGRSRSRDRDRSR 581
Query: 101 ERNHSRKSDRGTHIGKSSSPSPR-TRRLARARDEGDAE--RVTERDHERNNGRENGKGKL 157
+ +SR DR + +S S R T R R+ R +ER+ ++ RE +
Sbjct: 582 SKEYSRNRDRESRRRRSRSRERRGTPDRYRGRENRRRRNSRSSEREESQSRNRERYSNR- 640
Query: 158 GEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVS--RSPSP 215
E KR ++H + K+ R+ R+ D + P S R
Sbjct: 641 -ESRSSYKRNDSESQRKRHSKSHESSSPESSKGKKSSRDQDRSPDSKKR-PSSKERESKS 698
Query: 216 HTKRLRRADAKVTERERE-NDHSRASDKDIH---RERVSERET 254
++ R + + E+E N S + ++D H +++ S+RET
Sbjct: 699 YSHRSNEKEKTRSSAEKEINQKSESQERD-HAPSKDKKSDRET 740
>MGI|MGI:1914171 [details] [associations]
symbol:Prpf38b "PRP38 pre-mRNA processing factor 38 (yeast)
domain containing B" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] MGI:MGI:1914171
Pfam:PF03371 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
EMBL:AL671894 GeneTree:ENSGT00700000104061 InterPro:IPR005037
PANTHER:PTHR23142 CTD:55119 eggNOG:NOG266713 HOGENOM:HOG000115682
KO:K12850 OrthoDB:EOG4NKBWJ OMA:SIEPESQ ChiTaRS:PRPF38B
EMBL:AK003895 EMBL:AK015938 EMBL:AK018126 EMBL:BC050900
EMBL:BC052077 IPI:IPI00320636 RefSeq:NP_080121.1 UniGene:Mm.51049
ProteinModelPortal:Q80SY5 STRING:Q80SY5 PhosphoSite:Q80SY5
PaxDb:Q80SY5 PRIDE:Q80SY5 Ensembl:ENSMUST00000029480 GeneID:66921
KEGG:mmu:66921 UCSC:uc008qzx.1 InParanoid:Q80SY5 NextBio:323021
Bgee:Q80SY5 Genevestigator:Q80SY5 Uniprot:Q80SY5
Length = 542
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 65/221 (29%), Positives = 92/221 (41%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS R SP R R SR++S R ERE ERE+
Sbjct: 262 RSPRRSLSPRRSPRR--SRSRSHHREGHGSSSFDRELEREKERQRL--ERE---AKEREK 314
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDA-ERVTERDHERNNGRENGKGKLG 158
ER SR DRG +S S R R +R+RD +GD +R ER+ E GR +
Sbjct: 315 ERRRSRSIDRGLDRRRSRSRE-RHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDK 373
Query: 159 EXXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHT 217
E + + +R+ + + K E + +R H R KE+ SRS S
Sbjct: 374 ERGSDRERDRERSRERSKEQRSRGDGEEKKHKEDKEDRRH-RDDKKESKKKHSRSRSRER 432
Query: 218 K-RLRRADAKVTERERENDHSRASDKDIHRERVSERE-TGS 256
K R R +A R R D S + K+ +E+ ++R +GS
Sbjct: 433 KHRSRSRNAGKRSRSRSKDKS-SRHKNESKEKANKRSRSGS 472
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 50/215 (23%), Positives = 70/215 (32%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
HR H SS RE ER R + + A+ R + R
Sbjct: 283 HREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLDR---RRSRSRERHRS 339
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
+ R+ RK DR + + R RR R RD D ER ++R+ +R RE K +
Sbjct: 340 RSRSRDRKGDRRDRDREREKENERGRR--RDRDY-DKERGSDRERDRERSRERSKEQRSR 396
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKR 219
+R R E + ER H S SRS ++
Sbjct: 397 GDGEEKKHKEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRNAGKRSRSRSKDKSSRH 456
Query: 220 LRRADAKVTERERENDHSRASDKDIH-RERVSERE 253
+ K +R R R + RE RE
Sbjct: 457 KNESKEKANKRSRSGSQGRTGSVEKRKREHSPSRE 491
>RGD|621696 [details] [associations]
symbol:Srek1 "splicing regulatory glutamine/lysine-rich protein
1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:621696 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003676 KO:K13165 CTD:140890
HOVERGEN:HBG079174 OrthoDB:EOG4K3KWS EMBL:AF234765 IPI:IPI00202759
RefSeq:NP_064477.1 UniGene:Rn.161755 ProteinModelPortal:Q9JKL7
STRING:Q9JKL7 PRIDE:Q9JKL7 GeneID:56763 KEGG:rno:56763
UCSC:RGD:621696 eggNOG:NOG310672 InParanoid:Q9JKL7 NextBio:611146
Genevestigator:Q9JKL7 GermOnline:ENSRNOG00000032735 Uniprot:Q9JKL7
Length = 494
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 56/220 (25%), Positives = 88/220 (40%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
HRS S +R+K+R +R+KSP + + D RE KV ER
Sbjct: 220 HRSRSHNRSRSRQKDR--ARSKSPHKKRSKSRERRKSRSRSRSRDKRKDTRE--KVKERV 275
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
+ER ++ +R K + + + ER E++ E++ +E K + E
Sbjct: 276 KEREREKEKEREKEREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRSKE 335
Query: 160 XXXXXXXXXXXXXXKR-LRRAHAEKDADKLTEKEHERNHSRT--SDKEAHLPVSRSPSPH 216
R + + A + + R+ SR+ + K SRSPSP
Sbjct: 336 ADEKRKKEKKSRTPPRSYNSSRRSRSASRERRRRRSRSSSRSPRTSKTIKRKSSRSPSP- 394
Query: 217 TKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
R + K +RE+E DH SD+ RER ER T +
Sbjct: 395 ----RGRNKKEKKREKERDH--ISDR---RER--ERSTST 423
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 45/167 (26%), Positives = 69/167 (41%)
Query: 89 ERELGKVTERE--QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER 146
E E GK ER+ + R+H+R R + KS S R++ R+R + R ++D R
Sbjct: 181 EPESGKSNERKGGRSRSHTRSKSRSS--SKSHSRRKRSQSKHRSRSH-NRSRSRQKDRAR 237
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ + K E K R E+ ++ EKE ER R DKE
Sbjct: 238 SKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKVKERVKEREREKEKEREKEREKDKE-- 295
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R + R + D E+ER+ + + DKD RE+ +E
Sbjct: 296 ----RGKNKDKDREKEKDH---EKERDKEKEKEQDKDKEREKDRSKE 335
Score = 126 (49.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 46/215 (21%), Positives = 83/215 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+S+ R +R R SR+ S ++ +R K +++
Sbjct: 186 KSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRARSKSPHKKR 245
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
++ R+ R + R + R + E + E+ ER+ ER +E GK K
Sbjct: 246 SKSRERRKSRSRSRSRDKRKDTREKVKERVK-EREREKEKEREKEREKDKERGKNK---- 300
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSD-KEAHLPVSRSPSPHTKR 219
++ R EK+ DK +KE E++ S+ +D K SR+P
Sbjct: 301 ---DKDREKEKDHEKERDKEKEKEQDK--DKEREKDRSKEADEKRKKEKKSRTPPRSYNS 355
Query: 220 LRRADAKVTERERENDHSRASDKDIHRERVSERET 254
RR+ + RER SR+S + + +R++
Sbjct: 356 SRRS--RSASRERRRRRSRSSSRSPRTSKTIKRKS 388
>UNIPROTKB|Q9JKL7 [details] [associations]
symbol:Srek1 "Splicing regulatory glutamine/lysine-rich
protein 1" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:621696 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003676 KO:K13165 CTD:140890 HOVERGEN:HBG079174
OrthoDB:EOG4K3KWS EMBL:AF234765 IPI:IPI00202759 RefSeq:NP_064477.1
UniGene:Rn.161755 ProteinModelPortal:Q9JKL7 STRING:Q9JKL7
PRIDE:Q9JKL7 GeneID:56763 KEGG:rno:56763 UCSC:RGD:621696
eggNOG:NOG310672 InParanoid:Q9JKL7 NextBio:611146
Genevestigator:Q9JKL7 GermOnline:ENSRNOG00000032735 Uniprot:Q9JKL7
Length = 494
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 56/220 (25%), Positives = 88/220 (40%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
HRS S +R+K+R +R+KSP + + D RE KV ER
Sbjct: 220 HRSRSHNRSRSRQKDR--ARSKSPHKKRSKSRERRKSRSRSRSRDKRKDTRE--KVKERV 275
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
+ER ++ +R K + + + ER E++ E++ +E K + E
Sbjct: 276 KEREREKEKEREKEREKDKERGKNKDKDREKEKDHEKERDKEKEKEQDKDKEREKDRSKE 335
Query: 160 XXXXXXXXXXXXXXKR-LRRAHAEKDADKLTEKEHERNHSRT--SDKEAHLPVSRSPSPH 216
R + + A + + R+ SR+ + K SRSPSP
Sbjct: 336 ADEKRKKEKKSRTPPRSYNSSRRSRSASRERRRRRSRSSSRSPRTSKTIKRKSSRSPSP- 394
Query: 217 TKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
R + K +RE+E DH SD+ RER ER T +
Sbjct: 395 ----RGRNKKEKKREKERDH--ISDR---RER--ERSTST 423
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 45/167 (26%), Positives = 69/167 (41%)
Query: 89 ERELGKVTERE--QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER 146
E E GK ER+ + R+H+R R + KS S R++ R+R + R ++D R
Sbjct: 181 EPESGKSNERKGGRSRSHTRSKSRSS--SKSHSRRKRSQSKHRSRSH-NRSRSRQKDRAR 237
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ + K E K R E+ ++ EKE ER R DKE
Sbjct: 238 SKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKVKERVKEREREKEKEREKEREKDKE-- 295
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R + R + D E+ER+ + + DKD RE+ +E
Sbjct: 296 ----RGKNKDKDREKEKDH---EKERDKEKEKEQDKDKEREKDRSKE 335
Score = 126 (49.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 46/215 (21%), Positives = 83/215 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+S+ R +R R SR+ S ++ +R K +++
Sbjct: 186 KSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRARSKSPHKKR 245
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
++ R+ R + R + R + E + E+ ER+ ER +E GK K
Sbjct: 246 SKSRERRKSRSRSRSRDKRKDTREKVKERVK-EREREKEKEREKEREKDKERGKNK---- 300
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSD-KEAHLPVSRSPSPHTKR 219
++ R EK+ DK +KE E++ S+ +D K SR+P
Sbjct: 301 ---DKDREKEKDHEKERDKEKEKEQDK--DKEREKDRSKEADEKRKKEKKSRTPPRSYNS 355
Query: 220 LRRADAKVTERERENDHSRASDKDIHRERVSERET 254
RR+ + RER SR+S + + +R++
Sbjct: 356 SRRS--RSASRERRRRRSRSSSRSPRTSKTIKRKS 388
>UNIPROTKB|Q5T200 [details] [associations]
symbol:ZC3H13 "Zinc finger CCCH domain-containing protein
13" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:AL157758 EMBL:AY283618
EMBL:AL445232 EMBL:AL831833 EMBL:AL136745 EMBL:AB020660
IPI:IPI00016472 IPI:IPI00329547 RefSeq:NP_055885.3
UniGene:Hs.136102 ProteinModelPortal:Q5T200 IntAct:Q5T200
MINT:MINT-3306871 PhosphoSite:Q5T200 DMDM:68052314 PaxDb:Q5T200
PRIDE:Q5T200 Ensembl:ENST00000242848 Ensembl:ENST00000282007
GeneID:23091 KEGG:hsa:23091 UCSC:uc001vas.1 UCSC:uc001vat.1
CTD:23091 GeneCards:GC13M046528 H-InvDB:HIX0000705
H-InvDB:HIX0011294 H-InvDB:HIX0039579 HGNC:HGNC:20368
neXtProt:NX_Q5T200 PharmGKB:PA134907656 eggNOG:NOG301709
HOVERGEN:HBG107115 InParanoid:Q5T200 OMA:RSNRSHT OrthoDB:EOG4KSPJC
ChiTaRS:ZC3H13 GenomeRNAi:23091 NextBio:44243 PMAP-CutDB:Q5T200
ArrayExpress:Q5T200 Bgee:Q5T200 CleanEx:HS_ZC3H13
Genevestigator:Q5T200 GermOnline:ENSG00000123200 Uniprot:Q5T200
Length = 1668
Score = 145 (56.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 48/169 (28%), Positives = 69/169 (40%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDA---ERVTERDHE 145
ER G+ R+ R S H G++ RR R D D ER ERD E
Sbjct: 623 ERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRE 682
Query: 146 RNNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHA-EKDADKLTEKEHERNHSRTSDKE 204
R RE + + E + L R A E++ ++ E++ ER+ R D+E
Sbjct: 683 RERDRERERERERERDREREKE------RELERERAREREREREKERDRERDRDRDHDRE 736
Query: 205 AHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R + ERERE + R +++ RER ERE
Sbjct: 737 RERERERDREKEREREREERERERERERERERERERERERARERDKERE 785
Score = 131 (51.2 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/204 (22%), Positives = 74/204 (36%)
Query: 46 GSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHS 105
G R+ R SP R Q D+R + ER++ER
Sbjct: 627 GERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERD 686
Query: 106 RKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGEXXXXX 164
R+ +R + + R L R R E + ER ERD ER+ R++ + + E
Sbjct: 687 RERERERERERDRERE-KERELERERAREREREREKERDRERDRDRDHDRERERERERDR 745
Query: 165 XXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLP-VSRSPSPHTKRLRRA 223
+R R E++ ++ E+E ER R ++E + +R +R
Sbjct: 746 EKEREREREERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKRE 805
Query: 224 DAKVTERERENDHSRASDKDIHRE 247
+ + R+ R S K E
Sbjct: 806 EIREDRNPRDGHDERKSKKRYRNE 829
>RGD|620315 [details] [associations]
symbol:Ppig "peptidylprolyl isomerase G" species:10116 "Rattus
norvegicus" [GO:0000413 "protein peptidyl-prolyl isomerization"
evidence=IDA] [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006457 "protein
folding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016363 "nuclear matrix" evidence=IDA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160 PRINTS:PR00153
PROSITE:PS00170 PROSITE:PS50072 EMBL:AF043642 RGD:620315
GO:GO:0006457 GO:GO:0016607 GO:GO:0016363 eggNOG:COG0652
GO:GO:0003755 SUPFAM:SSF50891 KO:K09566 CTD:9360 HOVERGEN:HBG048162
OrthoDB:EOG43FGWT HOGENOM:HOG000115659 EMBL:BC085723
IPI:IPI00194996 RefSeq:NP_113981.1 UniGene:Rn.10898
ProteinModelPortal:O55035 SMR:O55035 STRING:O55035
PhosphoSite:O55035 GeneID:83624 KEGG:rno:83624 UCSC:RGD:620315
InParanoid:O55035 NextBio:616195 Genevestigator:O55035
GermOnline:ENSRNOG00000007673 Uniprot:O55035
Length = 752
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/218 (20%), Positives = 87/218 (39%)
Query: 41 RSSHRGSSPAREKERHS-SRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
R R +P+R + R R+++P + D+ EL ++ E +
Sbjct: 334 RGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQ 393
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGREN--GKGKL 157
+ ++ H S SP+ + + + +D + ERD RN+ +++ K K+
Sbjct: 394 RSPVRVKEKKITDHRHMSESPNRKIEKEKKVKDHKSESK--ERDIRRNSEKDDKYNKNKV 451
Query: 158 GEXXXXXXXXXXXXXXKRLRR--AHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSP 215
+ K R H+ + ++ + ER+H T +KE L S+
Sbjct: 452 KKRGKSKSRSKSKERSKSKERDSKHSRHEDKRVRSRSKERDHETTKEKEKQLD-SKGKDQ 510
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R + +V + E+DHS++ +KD R + RE
Sbjct: 511 ERSRSKENSKQVESKSNEHDHSKSKEKD-RRAQSRSRE 547
>UNIPROTKB|O55035 [details] [associations]
symbol:Ppig "Peptidyl-prolyl cis-trans isomerase G"
species:10116 "Rattus norvegicus" [GO:0006457 "protein folding"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 EMBL:AF043642
RGD:620315 GO:GO:0006457 GO:GO:0016607 GO:GO:0016363 eggNOG:COG0652
GO:GO:0003755 SUPFAM:SSF50891 KO:K09566 CTD:9360 HOVERGEN:HBG048162
OrthoDB:EOG43FGWT HOGENOM:HOG000115659 EMBL:BC085723
IPI:IPI00194996 RefSeq:NP_113981.1 UniGene:Rn.10898
ProteinModelPortal:O55035 SMR:O55035 STRING:O55035
PhosphoSite:O55035 GeneID:83624 KEGG:rno:83624 UCSC:RGD:620315
InParanoid:O55035 NextBio:616195 Genevestigator:O55035
GermOnline:ENSRNOG00000007673 Uniprot:O55035
Length = 752
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/218 (20%), Positives = 87/218 (39%)
Query: 41 RSSHRGSSPAREKERHS-SRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
R R +P+R + R R+++P + D+ EL ++ E +
Sbjct: 334 RGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQ 393
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGREN--GKGKL 157
+ ++ H S SP+ + + + +D + ERD RN+ +++ K K+
Sbjct: 394 RSPVRVKEKKITDHRHMSESPNRKIEKEKKVKDHKSESK--ERDIRRNSEKDDKYNKNKV 451
Query: 158 GEXXXXXXXXXXXXXXKRLRR--AHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSP 215
+ K R H+ + ++ + ER+H T +KE L S+
Sbjct: 452 KKRGKSKSRSKSKERSKSKERDSKHSRHEDKRVRSRSKERDHETTKEKEKQLD-SKGKDQ 510
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R + +V + E+DHS++ +KD R + RE
Sbjct: 511 ERSRSKENSKQVESKSNEHDHSKSKEKD-RRAQSRSRE 547
>MGI|MGI:2145245 [details] [associations]
symbol:Srek1 "splicing regulatory glutamine/lysine-rich
protein 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:2145245 GO:GO:0005739
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003676 GeneTree:ENSGT00700000104035
eggNOG:NOG277302 KO:K13165 CTD:140890 HOVERGEN:HBG079174
OMA:EKEQDKD OrthoDB:EOG4K3KWS EMBL:AK033354 EMBL:AK037115
EMBL:AK039311 EMBL:AK044086 EMBL:AK052265 EMBL:BC070460
IPI:IPI00227738 IPI:IPI00379480 RefSeq:NP_766180.1
UniGene:Mm.458176 ProteinModelPortal:Q8BZX4 SMR:Q8BZX4
STRING:Q8BZX4 PhosphoSite:Q8BZX4 PaxDb:Q8BZX4 PRIDE:Q8BZX4
Ensembl:ENSMUST00000074616 GeneID:218543 KEGG:mmu:218543
UCSC:uc007rsh.1 InParanoid:Q8BZX4 NextBio:376337 Bgee:Q8BZX4
CleanEx:MM_SFRS12 Genevestigator:Q8BZX4
GermOnline:ENSMUSG00000032621 Uniprot:Q8BZX4
Length = 494
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 47/168 (27%), Positives = 70/168 (41%)
Query: 89 ERELGKVTERE--QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER 146
E E GK ER+ + R+H+R R + KS S R++ R+R + R ++D R
Sbjct: 181 EPESGKSNERKGGRSRSHTRSKSRSS--SKSHSRRKRSQSKHRSRSH-NRSRSRQKDRRR 237
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ + K E K R E+ +K EKE ER R DKE
Sbjct: 238 SKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKVKERVKEKEREKEREREKDREKDKE-- 295
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERET 254
R + R + D E+ER+ + + DKD RE+ +ET
Sbjct: 296 ----RGKNKDKDREKEKDH---EKERDKEKEKEQDKDKEREKDRSKET 336
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 62/227 (27%), Positives = 92/227 (40%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
HRS S +R+K+R S++ KR++ E+ +V E+E
Sbjct: 220 HRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTREKVKERVKEKE 279
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLG 158
+E+ R+ DR R + + R+ E D E+ ERD E+ +E K K
Sbjct: 280 REKEREREKDR-------EKDKERGKNKDKDREKEKDHEK--ERDKEKE--KEQDKDKER 328
Query: 159 EXXXXXXXXXXXXXXKRLR---RAHAEKDADKLTEKEHERNHSRTSD------KEAHLPV 209
E K+ R R++ + T +E R SR+S K
Sbjct: 329 EKDRSKETDEKRKKEKKSRTPPRSYNASRRSRSTSRERRRRRSRSSSRSPRTSKTVKRKS 388
Query: 210 SRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
SRSPSP R + K +RE+E DH SD+ RER ER T +
Sbjct: 389 SRSPSP-----RGRNKKEKKREKERDH--ISDR---RER--ERSTST 423
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 45/215 (20%), Positives = 85/215 (39%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+S+ R +R R SR+ S ++ +R K +++
Sbjct: 186 KSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKR 245
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
++ R+ R + R + R +++ + E+ ER+ +R +E GK K
Sbjct: 246 SKSRERRKSRSRSRSRDKRKDTREKVKERVKEK-EREKEREREKDREKDKERGKNK---- 300
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSR-TSDKEAHLPVSRSPSPHTKR 219
++ R EK+ DK +KE E++ S+ T +K SR+P
Sbjct: 301 ---DKDREKEKDHEKERDKEKEKEQDK--DKEREKDRSKETDEKRKKEKKSRTPPRSYNA 355
Query: 220 LRRADAKVTERERENDHSRASDKDIHRERVSERET 254
RR+ + T RER SR+S + + +R++
Sbjct: 356 SRRS--RSTSRERRRRRSRSSSRSPRTSKTVKRKS 388
>UNIPROTKB|E2RN56 [details] [associations]
symbol:ZC3H13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00700000104144 CTD:23091 OMA:RSNRSHT
EMBL:AAEX03013137 RefSeq:XP_542572.2 Ensembl:ENSCAFT00000007276
GeneID:485453 KEGG:cfa:485453 Uniprot:E2RN56
Length = 1656
Score = 147 (56.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 46/170 (27%), Positives = 69/170 (40%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSS----PSPRTRRLARARDEGDAERVTERDH 144
ER G+ R+ R S H G++ RR+ R D D ER ERD
Sbjct: 624 ERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVEDRRD-ERARERDR 682
Query: 145 ERNNGRENGKGKLGEXXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKEHERNHSRTSDK 203
ER RE + + + + R R EK+ D+ E+E +R+H R ++
Sbjct: 683 ERERDRERERERERDREREKERELERERAREREREREREKERDR--ERERDRDHDRERER 740
Query: 204 EAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
E + + R + ERERE + RA ++D RER + E
Sbjct: 741 ERERDREKEREREREERERERERERERERERERERARERDKERERQRDWE 790
Score = 127 (49.8 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 45/204 (22%), Positives = 73/204 (35%)
Query: 46 GSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHS 105
G R+ R SP R Q ++R + ER++ER
Sbjct: 628 GERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVEDRRDERARERDRERERD 687
Query: 106 RKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGEXXXXX 164
R+ +R + R RAR+ E + ER ERD ER R++ + + E
Sbjct: 688 RERERERERDREREKERELER-ERAREREREREREKERDRERERDRDHDRERERERERDR 746
Query: 165 XXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLP-VSRSPSPHTKRLRRA 223
+R R E++ ++ E+E ER R ++E + +R +R
Sbjct: 747 EKEREREREERERERERERERER--ERERERARERDKERERQRDWEDKDKGRDDRREKRE 804
Query: 224 DAKVTERERENDHSRASDKDIHRE 247
D + R+ R S K E
Sbjct: 805 DTREDRNPRDGHDERKSKKRYRNE 828
Score = 44 (20.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 41 RSSHRGSSPAREKERHSSRAKSP 63
+SS + SS A +K+R ++ SP
Sbjct: 222 KSSPKSSSSASKKDRKTTAVSSP 244
>UNIPROTKB|E1BXC5 [details] [associations]
symbol:ZC3H13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00700000104144 OMA:RSNRSHT
EMBL:AADN02005441 EMBL:AADN02005442 EMBL:AADN02005443
IPI:IPI00572738 Ensembl:ENSGALT00000027439 Uniprot:E1BXC5
Length = 1588
Score = 143 (55.4 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 55/208 (26%), Positives = 82/208 (39%)
Query: 46 GSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHS 105
G R+ RA SP R Q D+R + ERE+ER
Sbjct: 627 GERDRRDNRERDQRASSPVRHQGRSDDLERDERRDERRVDRSDDRRDERARERERERERD 686
Query: 106 RKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGEXXXXX 164
R+ +R + R RAR+ E + ER +RD ER+ R++ + + E
Sbjct: 687 RERERERDREREREKERELER-DRARERERERERDKDRDRERDRDRDHDREREREREREK 745
Query: 165 XXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRAD 224
+R R E++ D+ E+E ER R DKE R K R D
Sbjct: 746 EREREREERERER----ERERDR--ERERERERGRDRDKERE----RQRDWDDKDKGRED 795
Query: 225 AKVTERERENDHSRASDKDIHRERVSER 252
+ +R RE+ S +D+H ER S++
Sbjct: 796 RR--DR-REDIREERSSRDVHEERKSKK 820
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 49/167 (29%), Positives = 67/167 (40%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
ER G+ R+ R S H G+S RR R D D +R ER ER
Sbjct: 623 ERRHGERDRRDNRERDQRASSPVRHQGRSDDLERDERRDERRVDRSD-DRRDERARERER 681
Query: 149 GRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLP 208
RE + + E +R R E + D+ E+E ER + D+E
Sbjct: 682 ERERDRERERERDR-----------EREREKERELERDRARERERERERDKDRDRERDR- 729
Query: 209 VSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETG 255
R +R R + K ERERE + R +++ RER ERE G
Sbjct: 730 -DRDHDRERERERERE-KERERERE-ERERERERERDRERERERERG 773
>MGI|MGI:2445173 [details] [associations]
symbol:Ppig "peptidyl-prolyl isomerase G (cyclophilin G)"
species:10090 "Mus musculus" [GO:0000413 "protein peptidyl-prolyl
isomerization" evidence=ISO] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0016853 "isomerase
activity" evidence=IEA] InterPro:IPR002130 InterPro:IPR020892
Pfam:PF00160 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
MGI:MGI:2445173 GO:GO:0005737 GO:GO:0006457 GO:GO:0016607
GO:GO:0016363 EMBL:AL845261 eggNOG:COG0652 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00550000074595
KO:K09566 CTD:9360 HOVERGEN:HBG048162 OMA:NKKFDHE OrthoDB:EOG43FGWT
EMBL:U91923 EMBL:AK135713 EMBL:AK164670 IPI:IPI00349306
RefSeq:NP_001074555.1 UniGene:Mm.11815 UniGene:Mm.474951
UniGene:Mm.488936 ProteinModelPortal:A2AR02 SMR:A2AR02
STRING:A2AR02 PhosphoSite:A2AR02 PaxDb:A2AR02 PRIDE:A2AR02
Ensembl:ENSMUST00000040915 Ensembl:ENSMUST00000090858 GeneID:228005
KEGG:mmu:228005 UCSC:uc008jyl.1 HOGENOM:HOG000115659
InParanoid:A2AR02 NextBio:378889 Bgee:A2AR02 CleanEx:MM_PPIG
Genevestigator:A2AR02 Uniprot:A2AR02
Length = 752
Score = 139 (54.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 45/218 (20%), Positives = 87/218 (39%)
Query: 41 RSSHRGSSPAREKERHS-SRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
R R +P+R + R R+++P + D+ EL ++ E +
Sbjct: 334 RGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQ 393
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGREN--GKGKL 157
+ ++ H S SP+ + + +A+D + ERD RN+ +++ K K+
Sbjct: 394 RSPVRVKEKKITDHRHMSESPNRKVEKEKKAKDHKSESK--ERDIRRNSEKDDKYNKNKV 451
Query: 158 GEXXXXXXXXXXXXXXKRLRR--AHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSP 215
+ K R H+ + ++ + ER+H T +KE L +
Sbjct: 452 KKRGKSKSRSKSKERSKSKERDSKHSRHEDKRVRSRSKERDHETTKEKEKPLD-PKGKDQ 510
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R + +V + E+DHS++ +KD R + RE
Sbjct: 511 ERSRSKENSKQVESKSNEHDHSKSKEKD-RRAQSRSRE 547
>RGD|1562940 [details] [associations]
symbol:Prpf38b "PRP38 pre-mRNA processing factor 38 (yeast)
domain containing B" species:10116 "Rattus norvegicus" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] RGD:1562940
Pfam:PF03371 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GeneTree:ENSGT00700000104061 InterPro:IPR005037 PANTHER:PTHR23142
CTD:55119 eggNOG:NOG266713 HOGENOM:HOG000115682 KO:K12850
OrthoDB:EOG4NKBWJ OMA:SIEPESQ EMBL:BC079264 IPI:IPI00389442
RefSeq:NP_001019476.1 UniGene:Rn.7210 ProteinModelPortal:Q6AXY7
PRIDE:Q6AXY7 Ensembl:ENSRNOT00000027738 GeneID:499691
KEGG:rno:499691 UCSC:RGD:1562940 InParanoid:Q6AXY7 NextBio:703698
Genevestigator:Q6AXY7 Uniprot:Q6AXY7
Length = 542
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 64/222 (28%), Positives = 91/222 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS R SP R R SR++S R ERE ERE+
Sbjct: 261 RSPRRSLSPRRSPRR--SRSRSHHRDGHGSSSFDRELEREKERQRL--ERE---AKEREK 313
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDA-ERVTERDHERNNGRENGKGKLG 158
ER SR DRG +S S R R +R+RD +GD +R ER+ E GR +
Sbjct: 314 ERRRSRSLDRGLDRRRSRSRE-RHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDK 372
Query: 159 EXXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHT 217
+ + + +R+ E + K E + +R H R KE+ SRS S
Sbjct: 373 DRGNDRERDRERSRERSKEQRSRGEGEEKKHKEDKEDRRH-RDDKKESKKKHSRSRSRER 431
Query: 218 K-RLRRADAKVTERERENDHSRASD-KDIHRERVSERE-TGS 256
K R R +R R +AS K+ +E+ ++R +GS
Sbjct: 432 KHRSRSRSRNAGKRSRSRSKDKASKHKNESKEKSNKRSRSGS 473
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 54/220 (24%), Positives = 80/220 (36%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
HR H SS RE ER R + + A+ R + R
Sbjct: 282 HRDGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSLDRGLDR---RRSRSRERHRS 338
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARA--RDEG-DAERVTERDHERNNG-RENGKG 155
+ R+ RK DR + + R RR R +D G D ER ER ER+ R G+G
Sbjct: 339 RSRSRDRKGDRRDRDREREKENERGRRRDRDYDKDRGNDRERDRERSRERSKEQRSRGEG 398
Query: 156 KLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHE-RNHSRTSDKEAHLPVSRSPS 214
+ + K ++ H+ + E++H R+ SR + K + SRS
Sbjct: 399 EEKKHKEDKEDRRHRDDKKESKKKHSRS---RSRERKHRSRSRSRNAGKRSR---SRSKD 452
Query: 215 PHTKRLRRADAKVTERERENDHSRASDKDIH-RERVSERE 253
+K + K +R R R + RE RE
Sbjct: 453 KASKHKNESKEKSNKRSRSGSQGRTGSVEKRKREHSPSRE 492
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 47/170 (27%), Positives = 78/170 (45%)
Query: 88 DERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
+E +L K + R+++R++ RK D+G+ K R +R+ + E D +R + + E+
Sbjct: 18 EEADLKK-SRRDRDRSNERKKDKGSE--KRREKDRRKKRVKSSDSEDDYDRDDDEEREKR 74
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKE-AH 206
+E + + + KR D++ E+E ER+ R ++KE H
Sbjct: 75 KEKERERRRRDKDRV-----------KRRSERRKSSDSEDDVEEEDERDKRRVNEKERGH 123
Query: 207 LPVSRSPSPHTKRLR-RADAKVTERERENDHSRASDK--DIHRERVSERE 253
R KR R R + K ERERE D R + + +ERV ERE
Sbjct: 124 REHERDRGKDRKRDREREERKDKEREREKDRERREREREEREKERVKERE 173
>UNIPROTKB|Q5VTL8 [details] [associations]
symbol:PRPF38B "Pre-mRNA-splicing factor 38B" species:9606
"Homo sapiens" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] Pfam:PF03371 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 EMBL:AL591719 EMBL:AL160171 InterPro:IPR005037
PANTHER:PTHR23142 CTD:55119 eggNOG:NOG266713 KO:K12850
OrthoDB:EOG4NKBWJ EMBL:AK001192 EMBL:BC007757 EMBL:BC016296
EMBL:BC024275 EMBL:BC040127 EMBL:BC053838 EMBL:BC107801
EMBL:BC130346 EMBL:BC132963 EMBL:AY211915 IPI:IPI00018098
IPI:IPI00647851 RefSeq:NP_060531.2 UniGene:Hs.342307
ProteinModelPortal:Q5VTL8 IntAct:Q5VTL8 MINT:MINT-1746333
STRING:Q5VTL8 PhosphoSite:Q5VTL8 DMDM:74746965 PaxDb:Q5VTL8
PRIDE:Q5VTL8 Ensembl:ENST00000370021 Ensembl:ENST00000370022
Ensembl:ENST00000370025 GeneID:55119 KEGG:hsa:55119 UCSC:uc001dvv.4
GeneCards:GC01P109234 HGNC:HGNC:25512 neXtProt:NX_Q5VTL8
PharmGKB:PA142671126 HOVERGEN:HBG101033 InParanoid:Q5VTL8
OMA:SIEPESQ ChiTaRS:PRPF38B GenomeRNAi:55119 NextBio:58764
Bgee:Q5VTL8 CleanEx:HS_PRPF38B Genevestigator:Q5VTL8 Uniprot:Q5VTL8
Length = 546
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 57/205 (27%), Positives = 79/205 (38%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
HR H SS RE ER R + + A+ ER + ER
Sbjct: 282 HREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGL-----ERRRSRSRERH 336
Query: 100 QERNHSR--KSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKL 157
+ R+ SR K DR + + R RR R RD D ER ER+ ER RE K
Sbjct: 337 RSRSRSRDRKGDRRDRDREREKENERGRR--RDRDY-DKERGNEREKERERSRERSK--- 390
Query: 158 GEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHT 217
E + R H + D EK+H R+ SR + H SRS S +
Sbjct: 391 -EQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSR---ERKHR--SRSRSRNA 444
Query: 218 KRLRRADAKVTERERENDHSRASDK 242
+ R+ +K + +N+ S+K
Sbjct: 445 GKRSRSRSKEKSSKHKNESKEKSNK 469
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 65/224 (29%), Positives = 91/224 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS R SP R R SR++S R ERE ERE+
Sbjct: 261 RSPRRSLSPRRSPRR--SRSRSHHREGHGSSSFDRELEREKERQRL--ERE---AKEREK 313
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDA-ERVTERDHERNNGRENGKGKLG 158
ER SR DRG +S S R R +R+RD +GD +R ER+ E GR +
Sbjct: 314 ERRRSRSIDRGLERRRSRSRE-RHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDK 372
Query: 159 EXXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKEHERNH---SRTSDKEAHLPVSRSPS 214
E + + +R+ E + K E + +R H R S KE SRS
Sbjct: 373 ERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRE 432
Query: 215 -PHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE-TGS 256
H R R +A R R + S + K+ +E+ ++R +GS
Sbjct: 433 RKHRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGS 475
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/217 (23%), Positives = 86/217 (39%)
Query: 46 GSSPAREKERHSSR--AKSPKRA---QXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
G A E +RH R ++SP+R+ + +REL ERE+
Sbjct: 244 GKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDREL----EREK 299
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
ER + + + + RR +R+ D G ER R ER+ R + + G+
Sbjct: 300 ERQR---------LEREAKEREKERRRSRSIDRG-LERRRSRSRERHRSRSRSRDRKGDR 349
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTK-- 218
R R +K+ EKE ER+ R+ ++ + V K
Sbjct: 350 RDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDD 409
Query: 219 RLRRADAKVTERERENDHSRASDKDIHRERVSERETG 255
R R D + +++E+++ SR+ ++ HR R R G
Sbjct: 410 RRHRDDKRDSKKEKKHSRSRSRERK-HRSRSRSRNAG 445
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 54/219 (24%), Positives = 85/219 (38%)
Query: 41 RSSHRGSSP--AREKERHSSRAKS-PKRAQXXXXXXXXXXXXXXXXXXXXD-ERELGKVT 96
RS RG +R +ERH SR++S ++ D ++E G
Sbjct: 319 RSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNER 378
Query: 97 EREQERNHSRKSD---RGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENG 153
E+E+ER+ R + RG K RR D+ D+++ E+ H R+ RE
Sbjct: 379 EKERERSRERSKEQRSRGEVEEKKHKEDKDDRR--HRDDKRDSKK--EKKHSRSRSRER- 433
Query: 154 KGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSP 213
K + K H + +K ++ + RT E SP
Sbjct: 434 KHR-SRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSP 492
Query: 214 SPHTKRLRRADAKVTERERENDHSRASDK-DIHRERVSE 251
S R +R+ +K ER + DHS + D+ D H R S+
Sbjct: 493 SKEKSR-KRSRSK--ERSHKRDHSDSKDQSDKHDRRRSQ 528
>RGD|1307729 [details] [associations]
symbol:Zc3h13 "zinc finger CCCH type containing 13"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:1307729 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00700000104144 OMA:RSNRSHT IPI:IPI00373079
Ensembl:ENSRNOT00000015467 UCSC:RGD:1307729 Uniprot:E9PSN4
Length = 1727
Score = 141 (54.7 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 48/176 (27%), Positives = 68/176 (38%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDA---ERVTERDHE 145
ER G+ R+ R S H G+S RR R D D ERV +RD E
Sbjct: 680 ERRHGERDRRDNRERDQRPSSPIRHQGRSEELEREERREERRIDRVDERRDERVRDRDRE 739
Query: 146 RNNGRENGKGKLGEXXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKE-------HERNH 197
R RE + + E + R R EK+ ++ E+E H+R
Sbjct: 740 RERERERERDREREREREKERERELERERAREREREREKERERERERERDQRDRDHDRER 799
Query: 198 SRTSDKEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R ++E R + R + ERERE + R +++ RER ERE
Sbjct: 800 EREREREREKEREREERERERERERERERERERERERERERERERERAREREKERE 855
Score = 133 (51.9 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 43/204 (21%), Positives = 77/204 (37%)
Query: 46 GSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHS 105
G R+ R SP R Q DER +V +R++ER
Sbjct: 684 GERDRRDNRERDQRPSSPIRHQGRSEELEREERREERRIDRVDERRDERVRDRDRERERE 743
Query: 106 RKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXXXX 165
R+ +R + R R L R R + ER E++ ER RE + + +
Sbjct: 744 RERERDREREREREKE-RERELERERAR-EREREREKERERERERERDQ-RDRDHDRERE 800
Query: 166 XXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADA 225
K R E++ ++ E+E ER R ++E R+ +R R+ +
Sbjct: 801 REREREREKEREREERERERERERERERERERERERERERERERERAREREKERERQREW 860
Query: 226 KVTERERENDHSRASDKDIHRERV 249
+ ++ R++ + D + +R+
Sbjct: 861 EDKDKGRDDRREKREDVHVREDRI 884
Score = 124 (48.7 bits), Expect = 0.00053, P = 0.00053
Identities = 47/168 (27%), Positives = 70/168 (41%)
Query: 88 DERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
+ER + +V ER ER R +R + R R R R++ + ER ER+ R
Sbjct: 718 EERRIDRVDERRDERVRDRDRER-----ERERERERDREREREREK-ERERELERERARE 771
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHL 207
RE K + E R R E++ +K E+E ER R ++E
Sbjct: 772 REREREKER--ERERERERDQRDRDHDREREREREREREKERERE-ERERERERERERER 828
Query: 208 PVSRSPSPHTKRLRRADAKVTERERENDHSRA-SDKDIHRE-RVSERE 253
R +R R + + ERE+E + R DKD R+ R +RE
Sbjct: 829 ERERERERERERERERE-RAREREKERERQREWEDKDKGRDDRREKRE 875
>UNIPROTKB|F1N0H5 [details] [associations]
symbol:ZC3H13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00700000104144 CTD:23091 OMA:RSNRSHT
EMBL:DAAA02032834 EMBL:DAAA02032829 EMBL:DAAA02032830
EMBL:DAAA02032831 EMBL:DAAA02032832 EMBL:DAAA02032833
IPI:IPI00712570 RefSeq:XP_002691826.1 RefSeq:XP_612879.2
UniGene:Bt.56770 Ensembl:ENSBTAT00000009295 GeneID:540735
KEGG:bta:540735 NextBio:20878804 Uniprot:F1N0H5
Length = 1652
Score = 148 (57.2 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 46/168 (27%), Positives = 68/168 (40%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDA---ERVTERDHE 145
ER G+ R+ R S H G++ RR R D D ER ERD E
Sbjct: 624 ERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRTDDRRDERARERDRE 683
Query: 146 RNNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEA 205
R RE + + + R R E++ ++ E+E +R H R ++E
Sbjct: 684 RERERERERERERDREREKERELERERAAREREREREREKERDRERERDREHDRERERE- 742
Query: 206 HLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R + + ERERE + R +++ RER ERE
Sbjct: 743 -----REREREKEREREREERERERERERERERERERERARERERERE 785
Score = 132 (51.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 49/208 (23%), Positives = 75/208 (36%)
Query: 46 GSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHS 105
G R+ R SP R Q D+R + ER++ER
Sbjct: 628 GERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRTDDRRDERARERDRERERE 687
Query: 106 RKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGEXXXXX 164
R+ +R + R AR+ E + ER ERD ER RE+ + + E
Sbjct: 688 RERERERERDREREKERELERERAAREREREREREKERDRERERDREHDRERERERERER 747
Query: 165 XXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRAD 224
K R E++ ++ E+E ER R +E R K R D
Sbjct: 748 E--------KEREREREERERERERERERERERERERARERERERERQREWEDKEKARED 799
Query: 225 AKVTERERENDHSRASDKDIHRERVSER 252
+ +RE+ + +D H ER S++
Sbjct: 800 RR---EKREDLREDRNPRDGHEERKSKK 824
Score = 122 (48.0 bits), Expect = 0.00084, P = 0.00084
Identities = 45/184 (24%), Positives = 67/184 (36%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R+ R ARE++R R + +R + ERE ERE+
Sbjct: 668 RTDDRRDERARERDRERERERERERERERDREREKERELERERAARERERE----REREK 723
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
ER+ R+ DR H + R R R R+ + ER ER+ ER RE + + E
Sbjct: 724 ERDRERERDR-EHDREREREREREREKEREREREERERERERERERERERERERAR--ER 780
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRL 220
++ R EK D ++ H K+ + SPSP
Sbjct: 781 ERERERQREWEDKEKAREDRREKREDLREDRNPRDGHEERKSKKRYRNEG-SPSPRQSPK 839
Query: 221 RRAD 224
RR +
Sbjct: 840 RRRE 843
Score = 40 (19.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 41 RSSHRGSSPAREKERHSSRAKSP 63
+SS + SS +K+R ++ SP
Sbjct: 222 KSSPKSSSSTSKKDRKTTAVSSP 244
>UNIPROTKB|Q8TF01 [details] [associations]
symbol:PNISR "Arginine/serine-rich protein PNISR"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] GO:GO:0016607 EMBL:CH471051 EMBL:AL513550
EMBL:AF314184 EMBL:AF314185 EMBL:AK027658 EMBL:AK027759
EMBL:AK027898 EMBL:AK074628 EMBL:AK291155 EMBL:BC007791
EMBL:BC019074 EMBL:BC052638 EMBL:BC064413 EMBL:BC064640
EMBL:AF161379 EMBL:AF161424 EMBL:AL080186 IPI:IPI00165995
IPI:IPI00477035 PIR:T12483 RefSeq:NP_056306.1 RefSeq:NP_116259.2
UniGene:Hs.520287 UniGene:Hs.644863 ProteinModelPortal:Q8TF01
IntAct:Q8TF01 STRING:Q8TF01 PhosphoSite:Q8TF01 DMDM:152031686
PaxDb:Q8TF01 PRIDE:Q8TF01 Ensembl:ENST00000369239
Ensembl:ENST00000438806 Ensembl:ENST00000478777 GeneID:25957
KEGG:hsa:25957 UCSC:uc003ppo.4 UCSC:uc003ppr.2 CTD:25957
GeneCards:GC06M099846 H-InvDB:HIX0006088 HGNC:HGNC:21222
HPA:HPA038796 neXtProt:NX_Q8TF01 PharmGKB:PA162402984
eggNOG:NOG129831 HOVERGEN:HBG062408 InParanoid:Q8TF01 KO:K13170
OMA:NEEIYYV OrthoDB:EOG444KM4 PhylomeDB:Q8TF01 ChiTaRS:PNISR
GenomeRNAi:25957 NextBio:47568 ArrayExpress:Q8TF01 Bgee:Q8TF01
CleanEx:HS_SFRS18 Genevestigator:Q8TF01 GermOnline:ENSG00000132424
Uniprot:Q8TF01
Length = 805
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/217 (23%), Positives = 86/217 (39%)
Query: 41 RSSHRGSSPAREKERHSSRAKSP----KRAQXXXXXXXXXXXXXXXXXXXXDERELGKVT 96
R+S R SSP R+K RHS R++SP +R++ D R + +
Sbjct: 544 RTSSRSSSPKRKK-RHS-RSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNS 601
Query: 97 -EREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKG 155
ERE+ RN S +R +S S RT R +R+R D ++ ++ + KG
Sbjct: 602 IERERRRNRSPSRERRR--SRSRSRDRRTNRASRSRSR-DRRKIDDQRGNLSGNSHKHKG 658
Query: 156 KLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKE-HERNHSRTSDKEAHLPVSRSPS 214
+ E ++ + E++ DK EK+ E + S ++ L R
Sbjct: 659 EAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESE 718
Query: 215 PHTKRLRRADAKVTERERENDHSRASDKDIHRERVSE 251
R K+ + D +++ KD + S+
Sbjct: 719 RTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSD 755
>ZFIN|ZDB-GENE-040426-2878 [details] [associations]
symbol:prpf38b "PRP38 pre-mRNA processing factor
38 (yeast) domain containing B" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] Pfam:PF03371 ZFIN:ZDB-GENE-040426-2878
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 InterPro:IPR005037
PANTHER:PTHR23142 EMBL:BC061448 IPI:IPI00734997 RefSeq:NP_998654.1
UniGene:Dr.2143 ProteinModelPortal:Q6P7Y3 GeneID:406810
KEGG:dre:406810 CTD:55119 eggNOG:NOG266713 HOGENOM:HOG000115682
InParanoid:Q6P7Y3 KO:K12850 OrthoDB:EOG4NKBWJ NextBio:20818319
ArrayExpress:Q6P7Y3 Uniprot:Q6P7Y3
Length = 501
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 53/217 (24%), Positives = 84/217 (38%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
HR H G+S E ER R + K + D R + +R
Sbjct: 270 HRERH-GASFDYELERERDRQR--KEREGKDRDRDRDRDRERDRERDRDRRR-SRTPDRN 325
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARD---EGDAERVTERDHERNNGRENGKGK 156
ER SR +R +S+S RT R R +D E + ER ++D E + RE K K
Sbjct: 326 AERRRSRSRERRR--SRSTSRDKRTERKDRDKDREAESERERSRKKDREHHKDRERSKDK 383
Query: 157 LGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNH-SRTSDKEAHLPVSRSPSP 215
+ K+ R EK + + + +R H + S K+ SRS
Sbjct: 384 RSKGEGEERRHKDDKEEKKHRE---EKRSKRSRSRSRDRKHKAERSSKKRSRSGSRSRQE 440
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRERVSER 252
+ R + ++R++ SR+ ++ RE +ER
Sbjct: 441 AGEEKNRKRERSHSKDRQHKRSRSKERSHRRESSNER 477
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 47/170 (27%), Positives = 66/170 (38%)
Query: 98 REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEG-DAERVTERDHERNNGRENGKGK 156
+ Q R+ SR R H R R R EG D +R +RD ER+ R+ + +
Sbjct: 259 KSQNRSRSRSHHRERHGASFDYELERERDRQRKEREGKDRDRDRDRDRERDRERDRDRRR 318
Query: 157 LGEXXXXXXXXXXXXXXKRLRRAHAE------KDADKLTEKEHERNHSRTSDKEAHLPVS 210
+R R+ + KD DK E E ER SR D+E H
Sbjct: 319 SRTPDRNAERRRSRSRERRRSRSTSRDKRTERKDRDKDREAESERERSRKKDREHHKDRE 378
Query: 211 RSPSPHTK----RLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
RS +K R D K ++ RE S+ S + R+R + E S
Sbjct: 379 RSKDKRSKGEGEERRHKDDKEEKKHREEKRSKRS-RSRSRDRKHKAERSS 427
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 57/225 (25%), Positives = 88/225 (39%)
Query: 41 RSSHRGSSPAREKERHSS-------RAKSPKRAQXXXXXXXXXXXXXXXXXXXXD-EREL 92
+S +R S + +ERH + R + +R + D +R
Sbjct: 259 KSQNRSRSRSHHRERHGASFDYELERERDRQRKEREGKDRDRDRDRDRERDRERDRDRRR 318
Query: 93 GKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARD---EGDAERVTERDHERNNG 149
+ +R ER SR +R +S+S RT R R +D E + ER ++D E +
Sbjct: 319 SRTPDRNAERRRSRSRERRR--SRSTSRDKRTERKDRDKDREAESERERSRKKDREHHKD 376
Query: 150 RENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHS--RTSDKEAHL 207
RE K K + K+ R EK + + + +R H R+S K
Sbjct: 377 RERSKDKRSKGEGEERRHKDDKEEKKHRE---EKRSKRSRSRSRDRKHKAERSSKKR--- 430
Query: 208 PVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSER 252
SRS S R R+ + R+RE HS+ D+ R R ER
Sbjct: 431 --SRSGS----RSRQEAGEEKNRKRERSHSK--DRQHKRSRSKER 467
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 41/189 (21%), Positives = 70/189 (37%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R R +P R ER SR++ +R++ ERE + +RE
Sbjct: 314 RDRRRSRTPDRNAERRRSRSRERRRSRSTSRDKRTERKDRDKDREAESERERSRKKDREH 373
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRT-RRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
++ R D+ + G+ + + + R+E ++R R +R + E K
Sbjct: 374 HKDRERSKDKRSK-GEGEERRHKDDKEEKKHREEKRSKRSRSRSRDRKHKAERSSKKRSR 432
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEA-HLPVSRSPSPHTK 218
++ R+H+ KD + ER+H R S E H R S +
Sbjct: 433 SGSRSRQEAGEEKNRKRERSHS-KDRQHKRSRSKERSHRRESSNERIHARQERPSSESGE 491
Query: 219 RLR--RADA 225
R RAD+
Sbjct: 492 RTNSVRADS 500
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 44/195 (22%), Positives = 75/195 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKR-AQXXXXXXXXXXXXXXXXXXXXDER-ELGKVTER 98
R R RE++R R+++P R A+ ER + K E
Sbjct: 300 RDRDRDRERDRERDRDRRRSRTPDRNAERRRSRSRERRRSRSTSRDKRTERKDRDKDREA 359
Query: 99 EQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLG 158
E ER SRK DR H + S R++ R D + + E+ + R + +
Sbjct: 360 ESERERSRKKDREHHKDRERSKDKRSKGEGEERRHKDDKEEKKHREEKRSKRSRSRSRDR 419
Query: 159 EXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEH--ERNHSRTSDKE-AHLPVSRSPSP 215
+ R R+ A ++ ++ E+ H +R H R+ KE +H S +
Sbjct: 420 KHKAERSSKKRSRSGSRSRQ-EAGEEKNRKRERSHSKDRQHKRSRSKERSHRRESSNERI 478
Query: 216 HTKRLRRADAKVTER 230
H ++ R ++ ER
Sbjct: 479 HARQ-ERPSSESGER 492
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 49/211 (23%), Positives = 82/211 (38%)
Query: 51 REKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHSRKSDR 110
+ + R R+ SP+++Q ERE + + + ++ R DR
Sbjct: 245 KRRSRTPRRSPSPRKSQNRSRSRSHHRERHGASFDYELERERDRQRKEREGKDRDRDRDR 304
Query: 111 GTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXXXXXXXXX 170
+ R RR +R D +AER R ER R + K E
Sbjct: 305 DRERDRERD---RDRRRSRTPDR-NAERRRSRSRERRRSRSTSRDKRTERKDRDKDREAE 360
Query: 171 XXXKRLR---RAH---AEKDADKLTEKE-HERNHSRTSDKEAHLPVSRSPSPHTK-RLRR 222
+R R R H E+ DK ++ E ER H +++ H RS ++ R R+
Sbjct: 361 SERERSRKKDREHHKDRERSKDKRSKGEGEERRHKDDKEEKKHREEKRSKRSRSRSRDRK 420
Query: 223 ADAKVTERERENDHSRASDKDIHRERVSERE 253
A+ + ++R SR S ++ E+ +RE
Sbjct: 421 HKAERSSKKRSRSGSR-SRQEAGEEKNRKRE 450
>DICTYBASE|DDB_G0291063 [details] [associations]
symbol:thoc2 "putative THO2 protein" species:44689
"Dictyostelium discoideum" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0291063
GenomeReviews:CM000154_GR EMBL:AAFI02000174 eggNOG:NOG270898
KO:K12879 InterPro:IPR021418 InterPro:IPR021726 Pfam:PF11262
Pfam:PF11732 OMA:SFYTKFI RefSeq:XP_635459.2
ProteinModelPortal:Q54F78 STRING:Q54F78 EnsemblProtists:DDB0233558
GeneID:8627959 KEGG:ddi:DDB_G0291063 ProtClustDB:CLSZ2848575
Uniprot:Q54F78
Length = 2110
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 47/213 (22%), Positives = 84/213 (39%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R R REKER R K +R + ERE + ERE+
Sbjct: 1460 REREREREREREKERDREREKERER-EREREREREREREREKEKEKEKERERERERERER 1518
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
ER R+ +R K R + R + E + +R ++R+ ++NN + G G
Sbjct: 1519 EREREREREREREKEKERDREQREKEREREQREKERDR-SDRNSDKNNNNDGG----GSG 1573
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRL 220
+ + K+ +K +E+ R+ SR++D L SR K L
Sbjct: 1574 SSRSDKSSSKDSGSKKDQQTPRKEIEKSESRENIRD-SRSNDNNQSLSSSREIRERDKEL 1632
Query: 221 RRADAKVTE-RERENDHSRASDKDIHRERVSER 252
+ + + E R+++ ++ ++D+ R +R
Sbjct: 1633 KEKEQREKEQRDKDRENRERDNRDVRDSRNDQR 1665
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 45/158 (28%), Positives = 62/158 (39%)
Query: 96 TEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKG 155
T Q + D GT SSS +P T + DA+ + D E NN K
Sbjct: 1366 TSSTQTTTTTSSKDSGTTTTTSSS-TPTTTSSSNRDSIKDADMIDIND-ENNNNNNKSKE 1423
Query: 156 KLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSP 215
K E K R EK+ +K EKE ER R ++E R
Sbjct: 1424 KEKEREREKEREKEKEREKE-REREREKEREKEKEKEREREREREREREKERDREREKER 1482
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
+R R + + ERERE + + +++ RER ERE
Sbjct: 1483 ERERERERERE-REREREKEKEKEKERERERERERERE 1519
Score = 123 (48.4 bits), Expect = 0.00086, P = 0.00086
Identities = 46/157 (29%), Positives = 66/157 (42%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
E+E + E+E+E+ R+ +R K R R R E + ER ERD ER
Sbjct: 1423 EKEKEREREKEREKEKEREKEREREREKEREKEKEKER-ERER-EREREREKERDREREK 1480
Query: 149 GRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLP 208
RE + + E +R R EK+ +K E+E ER R ++E
Sbjct: 1481 ERERERERERER-------------EREREREKEKEKEKERERERERERERERERERERE 1527
Query: 209 VSRSPSPHTKRLRRADAKVTE-RERENDHS-RASDKD 243
R R +R + E RE+E D S R SDK+
Sbjct: 1528 REREKEKERDREQREKEREREQREKERDRSDRNSDKN 1564
Score = 123 (48.4 bits), Expect = 0.00086, P = 0.00086
Identities = 41/170 (24%), Positives = 68/170 (40%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPS-PRTRRLARARD-EGDAERVTERDHER 146
ERE K E+E+ER R+ +R K R R R R+ E D ER ER+ ER
Sbjct: 1427 EREREKEREKEKEREKEREREREKEREKEKEKEREREREREREREKERDREREKERERER 1486
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
RE + + E ++ R E++ ++ E+E ER R +KE
Sbjct: 1487 EREREREREREREKEKEK---------EKEREREREREREREREREREREREREKEKERD 1537
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
+R + D ++ N++ ++ S +++GS
Sbjct: 1538 REQREKEREREQREKERDRSDRNSDKNNNNDGGGSGSSRSDKSSSKDSGS 1587
>DICTYBASE|DDB_G0267796 [details] [associations]
symbol:DDB_G0267796 "initiation factor eIF-4 gamma,
MA3 domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
dictyBase:DDB_G0267796 SUPFAM:SSF48371 GO:GO:0003677
EMBL:AAFI02000003 GO:GO:0005681 GO:GO:0003743 GO:GO:0000398
Gene3D:1.25.40.180 eggNOG:NOG293831 KO:K13100 InterPro:IPR003891
Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 OMA:VENEERY
RefSeq:XP_647313.1 ProteinModelPortal:Q55G70 STRING:Q55G70
EnsemblProtists:DDB0233565 GeneID:8616124 KEGG:ddi:DDB_G0267796
InParanoid:Q55G70 Uniprot:Q55G70
Length = 925
Score = 141 (54.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 48/160 (30%), Positives = 74/160 (46%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
ER+L K ERE++R+H R DR ++ R R R RD +R +RDH+R+
Sbjct: 62 ERDLEK--ERERDRDHDRNRDRDRDRDRNRD---RDRDHDRNRDR---DRNRDRDHDRDR 113
Query: 149 GRENGKGKLGEXXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKEHERNHSRTSDKEAHL 207
RE K + + + R R E+D ++ EKE ER R D+
Sbjct: 114 DREREKDRERDRDRDRYGNKERDRDRDRERDRDRERDREREREKERERERERDRDRYG-- 171
Query: 208 PVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRE 247
RS T R R+ TE +++ND++ DKD +++
Sbjct: 172 --DRS----TSRDRKDTPTKTENDQDNDNTNKEDKDKNKD 205
Score = 132 (51.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 42/155 (27%), Positives = 66/155 (42%)
Query: 97 EREQERNHSRKS-DRGTHIGKSSSPSPRTRRLARARDEG-DAERVTERDHERNNGRENGK 154
ER+ + ++ KS DR +S S R R R+ + ER +RDH+RN R+ +
Sbjct: 26 ERDYKDSYDNKSKDRERSKSRSRSRDRDRNRYDRDRERDLEKERERDRDHDRNRDRDRDR 85
Query: 155 GKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPS 214
+ R R ++D ++ ++E +R+ R +KE R
Sbjct: 86 DR-NRDRDRDHDRNRDRDRNRDRDHDRDRDREREKDRERDRDRDRYGNKERDRDRDRERD 144
Query: 215 PHTKRLR-RADAKVTERERENDHSRASDKDIHRER 248
+R R R K ERERE D R D+ R+R
Sbjct: 145 RDRERDREREREKERERERERDRDRYGDRSTSRDR 179
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 364 ETNRFRGVTLLF 375
ETNRFR + ++
Sbjct: 755 ETNRFRNIAKMY 766
>UNIPROTKB|F1RK00 [details] [associations]
symbol:ZC3H13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00700000104144 OMA:RSNRSHT
EMBL:CU367850 Ensembl:ENSSSCT00000010315 Uniprot:F1RK00
Length = 1544
Score = 139 (54.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 46/170 (27%), Positives = 73/170 (42%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSS----PSPRTRRLARARDEGDAERVTERDH 144
ER G+ R+ R S H G++ RR+ RA D D ER ERD
Sbjct: 624 ERRHGERERRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRAEDRRD-ERARERDR 682
Query: 145 ERNNGRENGKGKLGEXXXXXXXXXXXXXXK-RLRRAHAEKDADKLTEKEHERNHSRTSDK 203
ER+ RE + + + + R R EK+ D+ ++E +R+H R ++
Sbjct: 683 ERDRERERERERERDREREKERELERERAREREREREREKERDR--DRERDRDHDRERER 740
Query: 204 EAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
E R +R R + ERERE + RA +++ R+R +R+
Sbjct: 741 ERER--DREKEREREREREERERERERERERERERAREREKERDR--QRD 786
Score = 131 (51.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/167 (28%), Positives = 69/167 (41%)
Query: 88 DERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHER 146
D+R + R Q RN + D + R AR RD E D ER ER+ ER
Sbjct: 639 DQRPSSPI--RHQGRNDELERDERREERRVDRAEDRRDERARERDRERDRERERERERER 696
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ RE + +L +R R ++D D+ E+E ER+ + ++E
Sbjct: 697 DREREKER-ELERERAREREREREREKERDRDRERDRDHDRERERERERDREKERERERE 755
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRA-SDKDIHRERVSER 252
R +R R + + ERE+E D R DKD RE E+
Sbjct: 756 RE-ERERERERERERERE-RAREREKERDRQRDWEDKDKGREERREK 800
Score = 44 (20.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 41 RSSHRGSSPAREKERHSSRAKSP 63
+SS + SS A +K+R ++ SP
Sbjct: 222 KSSPKSSSSASKKDRKTTAVSSP 244
>UNIPROTKB|I3LLA0 [details] [associations]
symbol:RBM25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0006915 GO:GO:0000166
GO:GO:0016607 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000381
GeneTree:ENSGT00700000104356 EMBL:CU633699
Ensembl:ENSSSCT00000032106 Uniprot:I3LLA0
Length = 513
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 45/169 (26%), Positives = 67/169 (39%)
Query: 90 RELGKV--TEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
RE+ K T ++ E +K I K R R R R E + ER ER+ E+
Sbjct: 279 REISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKE 338
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHL 207
RE + + +R R E+D D+ E+ +RN R+ +E
Sbjct: 339 KERERERER---------DRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSR 389
Query: 208 PVSRSPSPHTKRLR---RADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R R + ERERE + R +KD R+R + E
Sbjct: 390 DREREREREREREREREREREREREREREREREREREKDKKRDREEDEE 438
Score = 129 (50.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 44/167 (26%), Positives = 67/167 (40%)
Query: 89 ERELGKVTEREQE-RNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHER 146
E E GK + QE R+ +R + R R R R+ E + ER ERD +R
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDR 351
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ +E + + E K R+ EK D+ E+E ER R ++E
Sbjct: 352 DRTKERDRDRDRERDRDRDRERSSDRNKDRSRSR-EKSRDRERERERERERERERERERE 410
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R D K R+RE D A ++ ++ E+E
Sbjct: 411 REREREREREREREREKDKK---RDREEDEEDAYERRKLERKLREKE 454
>UNIPROTKB|E1BSR5 [details] [associations]
symbol:RBM25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000504
InterPro:IPR002483 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01480
PROSITE:PS50102 PROSITE:PS51025 SMART:SM00311 SMART:SM00360
GO:GO:0005737 GO:GO:0006915 GO:GO:0000166 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 Gene3D:1.20.1390.10
GO:GO:0000381 OMA:EDINAME SUPFAM:SSF101233
GeneTree:ENSGT00700000104356 EMBL:AADN02033574 EMBL:AADN02033573
IPI:IPI00591819 Ensembl:ENSGALT00000015198 Uniprot:E1BSR5
Length = 782
Score = 130 (50.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/212 (23%), Positives = 80/212 (37%)
Query: 47 SSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDE---RELGKV--TEREQE 101
++P++E + H + K K+ + RE+ K T ++ E
Sbjct: 180 NAPSQESDSHPRKKKKEKKEDYETSLSIEEDINAIEMEEDKRDLISREISKFRDTHKKLE 239
Query: 102 RNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXX 161
+K I K R R R R E + ER ER+ E+ RE + +
Sbjct: 240 EEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERER----- 294
Query: 162 XXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLR 221
R R ++D D+ E+ +RN R+ +E SR +R R
Sbjct: 295 ----DRDRDRTKDRDRDRERDRDRDRDRERSSDRNKDRSRSREK----SRDRERERERER 346
Query: 222 RADAKVTERERENDHSRASDKDIHRERVSERE 253
+ + ERERE + R +KD R+R + E
Sbjct: 347 ERERE-REREREREREREREKDKKRDREEDEE 377
>UNIPROTKB|E2RSE4 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0006457
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00550000074595 EMBL:AAEX03017743
Ensembl:ENSCAFT00000019654 Uniprot:E2RSE4
Length = 738
Score = 129 (50.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 49/210 (23%), Positives = 84/210 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS R +EKE+ S+ K +R++ +E + K E+++
Sbjct: 474 RSKERDHEIIKEKEKSDSKGKDQERSRSKEKSKQLESKS--------NEHDHNKSKEKDR 525
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
R SR +R T GK S S RTR +R+RD + RV R H+R+ R + E
Sbjct: 526 -RAQSRSRERDTTKGKHSYNS-RTRERSRSRDR--SRRVRSRSHDRDRSRSKDYHRYREQ 581
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTE--KEHERNHSRTSDKEAHLPVSRSPSPHTK 218
+ KD + + ER S++ +KE + S S H K
Sbjct: 582 EYRRRGRSRSRERRATPGRSRSKDRRRRRRDSRSSEREESQSRNKEKYRN-QESKSSHRK 640
Query: 219 RLRRADAKVTERERENDHSRASDKDIHRER 248
+ ++ + R+++ S +K R++
Sbjct: 641 ENSEGEKRMYSKNRDHNSSNNREKKAERDQ 670
Score = 120 (47.3 bits), Expect = 0.00054, P = 0.00054
Identities = 42/220 (19%), Positives = 85/220 (38%)
Query: 41 RSSHRGSSPAREKERHS-SRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
R R +P+R + R R+++P + D+ EL ++ E +
Sbjct: 321 RGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQ 380
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGREN--GKGKL 157
+ ++ H S SP+ + + + +D + ERD RN+ ++ K K+
Sbjct: 381 RSPVRIKEKKVIDHRHVSESPNRKNEKEKKVKDHKSNSK--ERDIRRNSEKDEKYNKNKV 438
Query: 158 GEXXXXXXXXXXXXXXKRLRR--AHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSP 215
+ K R H + ++ + ER+H +KE S+
Sbjct: 439 KKRAKSKSRSKSKEKSKSKERDTKHNRHEEKRMRSRSKERDHEIIKEKEKS--DSKGKDQ 496
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRE-RVSERET 254
R + ++ + E+DH+++ +KD + R ER+T
Sbjct: 497 ERSRSKEKSKQLESKSNEHDHNKSKEKDRRAQSRSRERDT 536
>UNIPROTKB|J9PAE8 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0006457
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00550000074595 KO:K09566 CTD:9360 OMA:NKKFDHE
EMBL:AAEX03017743 RefSeq:XP_849611.1 Ensembl:ENSCAFT00000044329
GeneID:607519 KEGG:cfa:607519 Uniprot:J9PAE8
Length = 753
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 49/210 (23%), Positives = 84/210 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS R +EKE+ S+ K +R++ +E + K E+++
Sbjct: 489 RSKERDHEIIKEKEKSDSKGKDQERSRSKEKSKQLESKS--------NEHDHNKSKEKDR 540
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
R SR +R T GK S S RTR +R+RD + RV R H+R+ R + E
Sbjct: 541 -RAQSRSRERDTTKGKHSYNS-RTRERSRSRDR--SRRVRSRSHDRDRSRSKDYHRYREQ 596
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTE--KEHERNHSRTSDKEAHLPVSRSPSPHTK 218
+ KD + + ER S++ +KE + S S H K
Sbjct: 597 EYRRRGRSRSRERRATPGRSRSKDRRRRRRDSRSSEREESQSRNKEKYRN-QESKSSHRK 655
Query: 219 RLRRADAKVTERERENDHSRASDKDIHRER 248
+ ++ + R+++ S +K R++
Sbjct: 656 ENSEGEKRMYSKNRDHNSSNNREKKAERDQ 685
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 42/220 (19%), Positives = 85/220 (38%)
Query: 41 RSSHRGSSPAREKERHS-SRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
R R +P+R + R R+++P + D+ EL ++ E +
Sbjct: 336 RGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQ 395
Query: 100 QERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGREN--GKGKL 157
+ ++ H S SP+ + + + +D + ERD RN+ ++ K K+
Sbjct: 396 RSPVRIKEKKVIDHRHVSESPNRKNEKEKKVKDHKSNSK--ERDIRRNSEKDEKYNKNKV 453
Query: 158 GEXXXXXXXXXXXXXXKRLRR--AHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSP 215
+ K R H + ++ + ER+H +KE S+
Sbjct: 454 KKRAKSKSRSKSKEKSKSKERDTKHNRHEEKRMRSRSKERDHEIIKEKEKS--DSKGKDQ 511
Query: 216 HTKRLRRADAKVTERERENDHSRASDKDIHRE-RVSERET 254
R + ++ + E+DH+++ +KD + R ER+T
Sbjct: 512 ERSRSKEKSKQLESKSNEHDHNKSKEKDRRAQSRSRERDT 551
>CGD|CAL0000980 [details] [associations]
symbol:orf19.4330 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000980 EMBL:AACQ01000022 RefSeq:XP_720635.1 GeneID:3637822
KEGG:cal:CaO19.4330 eggNOG:NOG256789 Uniprot:Q5AG50
Length = 690
Score = 128 (50.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/213 (23%), Positives = 79/213 (37%)
Query: 45 RGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNH 104
+GS + E HS K + + DE E KV +++++ +H
Sbjct: 314 KGSWKVKRGENHSDGNKHDGQHKGNKEDNHRDSDCECGYSSSDDEHEKPKVIDKKKQ-DH 372
Query: 105 SRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXXX 164
RK K ++ + + D ER E DHE +E+ K K E
Sbjct: 373 ERKKQEDHDKKKQEDHEHEKQKEHERKKQEDHEREKE-DHEHEKEKEHEKEK--EHEKEK 429
Query: 165 XXXXXXXXXKRLRRAHA-EKDADKLTEKEHE----RNHSRTSDKEAHLPVSRSPSPHTKR 219
K + H EK+ +K EKE E ++H + D E + H K
Sbjct: 430 EHEKEKEHEKEKEKDHGKEKEKEKEHEKEKEHGKGKDHGKEKDHEKEKDHEKEKD-HEKE 488
Query: 220 LRRADAKVTERERENDHSRASDKDIHRERVSER 252
K E+E+E DH + KD +++ +R
Sbjct: 489 KDHEKEKDHEKEKEKDHEKEKPKDHGKKKEHDR 521
>UNIPROTKB|Q5AG50 [details] [associations]
symbol:CaO19.4330 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000980 EMBL:AACQ01000022 RefSeq:XP_720635.1 GeneID:3637822
KEGG:cal:CaO19.4330 eggNOG:NOG256789 Uniprot:Q5AG50
Length = 690
Score = 128 (50.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 49/213 (23%), Positives = 79/213 (37%)
Query: 45 RGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNH 104
+GS + E HS K + + DE E KV +++++ +H
Sbjct: 314 KGSWKVKRGENHSDGNKHDGQHKGNKEDNHRDSDCECGYSSSDDEHEKPKVIDKKKQ-DH 372
Query: 105 SRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXXX 164
RK K ++ + + D ER E DHE +E+ K K E
Sbjct: 373 ERKKQEDHDKKKQEDHEHEKQKEHERKKQEDHEREKE-DHEHEKEKEHEKEK--EHEKEK 429
Query: 165 XXXXXXXXXKRLRRAHA-EKDADKLTEKEHE----RNHSRTSDKEAHLPVSRSPSPHTKR 219
K + H EK+ +K EKE E ++H + D E + H K
Sbjct: 430 EHEKEKEHEKEKEKDHGKEKEKEKEHEKEKEHGKGKDHGKEKDHEKEKDHEKEKD-HEKE 488
Query: 220 LRRADAKVTERERENDHSRASDKDIHRERVSER 252
K E+E+E DH + KD +++ +R
Sbjct: 489 KDHEKEKDHEKEKEKDHEKEKPKDHGKKKEHDR 521
>UNIPROTKB|E1BHM5 [details] [associations]
symbol:RBM25 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002483 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01480
PROSITE:PS50102 PROSITE:PS51025 SMART:SM00311 SMART:SM00360
GO:GO:0005737 GO:GO:0006915 GO:GO:0000166 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 Gene3D:1.20.1390.10
GO:GO:0000381 CTD:58517 KO:K12822 OMA:EDINAME SUPFAM:SSF101233
GeneTree:ENSGT00700000104356 EMBL:DAAA02029591 EMBL:DAAA02029588
EMBL:DAAA02029589 EMBL:DAAA02029590 IPI:IPI00692901
RefSeq:XP_002691044.2 RefSeq:XP_884737.3 UniGene:Bt.109575
Ensembl:ENSBTAT00000022826 GeneID:540258 KEGG:bta:540258
ArrayExpress:E1BHM5 Uniprot:E1BHM5
Length = 843
Score = 129 (50.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 45/169 (26%), Positives = 67/169 (39%)
Query: 90 RELGKV--TEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
RE+ K T ++ E +K I K R R R R E + ER ER+ E+
Sbjct: 279 REISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKE 338
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHL 207
RE + + +R R E+D D+ E+ +RN R+ +E
Sbjct: 339 KERERERER---------DRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSR 389
Query: 208 PVSRSPSPHTKRLR---RADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R R + ERERE + R +KD R+R + E
Sbjct: 390 DREREREREREREREREREREREREREREREREREREKDKKRDREEDEE 438
Score = 129 (50.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 44/167 (26%), Positives = 67/167 (40%)
Query: 89 ERELGKVTEREQE-RNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHER 146
E E GK + QE R+ +R + R R R R+ E + ER ERD +R
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDR 351
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ +E + + E K R+ EK D+ E+E ER R ++E
Sbjct: 352 DRTKERDRDRDRERDRDRDRERSSDRNKDRSRSR-EKSRDRERERERERERERERERERE 410
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R D K R+RE D A ++ ++ E+E
Sbjct: 411 REREREREREREREREKDKK---RDREEDEEDAYERRKLERKLREKE 454
>UNIPROTKB|P49756 [details] [associations]
symbol:RBM25 "RNA-binding protein 25" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=IDA] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0006915
"apoptotic process" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR002483
InterPro:IPR012677 Pfam:PF00076 Pfam:PF01480 PROSITE:PS50102
PROSITE:PS51025 SMART:SM00311 SMART:SM00360 GO:GO:0005737
GO:GO:0006915 EMBL:CH471061 GO:GO:0008380 GO:GO:0000166
GO:GO:0016607 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
Gene3D:1.20.1390.10 GO:GO:0000381 EMBL:AL442663 EMBL:AF109907
EMBL:AC004858 EMBL:AK026107 EMBL:AK094697 EMBL:BC062440
EMBL:BC083496 EMBL:BC111066 EMBL:BC113389 EMBL:BC113391
EMBL:BC136775 EMBL:BC136776 EMBL:BC144407 EMBL:L40392
IPI:IPI00004273 IPI:IPI00924634 IPI:IPI00925670 IPI:IPI00926163
RefSeq:NP_067062.1 UniGene:Hs.531106 PDB:3V53 PDBsum:3V53
ProteinModelPortal:P49756 SMR:P49756 IntAct:P49756
MINT:MINT-4545359 STRING:P49756 PhosphoSite:P49756 DMDM:226693631
PaxDb:P49756 PRIDE:P49756 DNASU:58517 Ensembl:ENST00000261973
Ensembl:ENST00000525321 Ensembl:ENST00000526754
Ensembl:ENST00000527432 Ensembl:ENST00000528081
Ensembl:ENST00000540173 GeneID:58517 KEGG:hsa:58517 UCSC:uc001xnn.4
UCSC:uc001xno.3 CTD:58517 GeneCards:GC14P073525 HGNC:HGNC:23244
HPA:HPA003025 MIM:612427 neXtProt:NX_P49756 PharmGKB:PA134912024
eggNOG:NOG250187 HOVERGEN:HBG068941 InParanoid:P49756 KO:K12822
OMA:EDINAME OrthoDB:EOG498V0R PhylomeDB:P49756 ChiTaRS:RBM25
GenomeRNAi:58517 NextBio:65066 ArrayExpress:P49756 Bgee:P49756
CleanEx:HS_RBM25 Genevestigator:P49756 GermOnline:ENSG00000119707
SUPFAM:SSF101233 Uniprot:P49756
Length = 843
Score = 129 (50.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 45/169 (26%), Positives = 67/169 (39%)
Query: 90 RELGKV--TEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
RE+ K T ++ E +K I K R R R R E + ER ER+ E+
Sbjct: 279 REISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKE 338
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHL 207
RE + + +R R E+D D+ E+ +RN R+ +E
Sbjct: 339 KERERERER---------DRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSR 389
Query: 208 PVSRSPSPHTKRLR---RADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R R + ERERE + R +KD R+R + E
Sbjct: 390 DREREREREREREREREREREREREREREREREREREKDKKRDREEDEE 438
Score = 129 (50.5 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 44/167 (26%), Positives = 67/167 (40%)
Query: 89 ERELGKVTEREQE-RNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHER 146
E E GK + QE R+ +R + R R R R+ E + ER ERD +R
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDR 351
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ +E + + E K R+ EK D+ E+E ER R ++E
Sbjct: 352 DRTKERDRDRDRERDRDRDRERSSDRNKDRSRSR-EKSRDRERERERERERERERERERE 410
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R D K R+RE D A ++ ++ E+E
Sbjct: 411 REREREREREREREREKDKK---RDREEDEEDAYERRKLERKLREKE 454
>ZFIN|ZDB-GENE-050626-88 [details] [associations]
symbol:rbmx2 "RNA binding motif protein, X-linked 2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050626-88 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00600000084414 EMBL:AL935199
IPI:IPI00505218 Ensembl:ENSDART00000143373 Bgee:F1RAH8
Uniprot:F1RAH8
Length = 450
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 47/169 (27%), Positives = 74/169 (43%)
Query: 88 DERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHER 146
DE+E ++ E+E+ER +K+DR H + R R R D E + +R +RD ER
Sbjct: 225 DEQE--QLKEKEREREEGKKTDR-RHA--ETQQRERDREGEREGDKERERDRGRQRDGER 279
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
R+ G+ + GE R R +++ D +++ ER+ R D
Sbjct: 280 QRERDGGRQRDGERDRERERDGG-----RQRDGERQRERDGGRQRDGERDRERERDGGRQ 334
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETG 255
R R+ D + +RERE D R D D R++ ER+ G
Sbjct: 335 RDGDRDREQERDGGRQRDVE-RDRERERDGGRQRDGD--RDQEQERDGG 380
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 54/217 (24%), Positives = 80/217 (36%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS SSP R K+ A + ERE GK T+R
Sbjct: 188 RSESSASSPIRVKKEKEDVAYEKYSVKGPAANRRDRADEQEQLKEKEREREEGKKTDRRH 247
Query: 101 ERNHSRKSDR-GTHIGKSSSPSPRTRRL--ARARD-EGDAERVTERDHERNNGRENGKGK 156
R+ DR G G R R+ R R+ +G +R ERD ER R+ G+ +
Sbjct: 248 AETQQRERDREGEREGDKERERDRGRQRDGERQRERDGGRQRDGERDRERE--RDGGRQR 305
Query: 157 LGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPH 216
GE + R E+D + + + +R R ++ + R
Sbjct: 306 DGERQRERDGGRQRDGERDRER---ERDGGRQRDGDRDREQERDGGRQRDVERDRERERD 362
Query: 217 TKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R R D ++E+E D R +D+ E+V ERE
Sbjct: 363 GGRQRDGDR---DQEQERDGGR--QRDV--EKVKERE 392
>ZFIN|ZDB-GENE-030131-605 [details] [associations]
symbol:srsf11 "serine/arginine-rich splicing factor
11" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 SMART:SM00360
ZFIN:ZDB-GENE-030131-605 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:NOG277302 CTD:9295 HOGENOM:HOG000121772
KO:K12899 OrthoDB:EOG4J9N10 EMBL:BC044186 IPI:IPI00491204
RefSeq:NP_955870.1 UniGene:Dr.20792 STRING:Q803U8 PRIDE:Q803U8
GeneID:321886 KEGG:dre:321886 InParanoid:Q803U8 NextBio:20807571
ArrayExpress:Q803U8 Bgee:Q803U8 Uniprot:Q803U8
Length = 461
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 45/163 (27%), Positives = 72/163 (44%)
Query: 98 REQERNHSRKS-DRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGREN-GKG 155
R + R+ R+S R H S R+R +R R + R R H R+ R + +
Sbjct: 225 RSRSRSRRRRSRSRSRHRRSKSHSRRRSRSRSRRRSKSPRRR---RSHSRDRSRRSRSRD 281
Query: 156 KLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRT-SDKEAHLP---VSR 211
+ + RR+ + + K H R+ S + S K++ P +SR
Sbjct: 282 RRKDEKYRKRSKTPPKSYSSARRSRST------SRKRHRRSRSMSRSPKKSRSPKRKLSR 335
Query: 212 SPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERET 254
SPSP +R ++ K +RER+ D R D+D +RE+ ER T
Sbjct: 336 SPSP--RRHKKEKKKDKDRERDRDRDRKEDRDRNREK-RERST 375
Score = 116 (45.9 bits), Expect = 0.00077, P = 0.00077
Identities = 52/211 (24%), Positives = 77/211 (36%)
Query: 41 RSSHRGSSPAREKER---HSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTE 97
RS R SP R + S R++S R + K
Sbjct: 255 RSRRRSKSPRRRRSHSRDRSRRSRSRDRRKDEKYRKRSKTPPKSYSSARRSRSTSRKRHR 314
Query: 98 REQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKL 157
R + + S K R S SPSPR + + +D+ D ER +RD +R R+ + K
Sbjct: 315 RSRSMSRSPKKSRSPKRKLSRSPSPRRHKKEKKKDK-DRER--DRDRDRKEDRDRNREK- 370
Query: 158 GEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVS-RSPSPH 216
R R++ +EK K+T E S+ E H S + SPH
Sbjct: 371 --RERSTSKKSKDKDKDRDRKSDSEKGDVKVTRDYDEEEQGYDSEHEEHERNSDAASSPH 428
Query: 217 TKR-LRRA--DAKVTERERENDHSRASDKDI 244
K L + DA E + ++ R D D+
Sbjct: 429 AKEPLADSADDAGRGESDGNSEDQRDEDMDM 459
>ZFIN|ZDB-GENE-040426-1619 [details] [associations]
symbol:zc3h13 "zinc finger CCCH-type containing
13" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 ZFIN:ZDB-GENE-040426-1619
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00700000104144 CTD:23091
HOVERGEN:HBG107115 EMBL:BX005426 EMBL:BX088652 IPI:IPI00609889
RefSeq:NP_956816.2 UniGene:Dr.76587 Ensembl:ENSDART00000054064
GeneID:560041 KEGG:dre:560041 HOGENOM:HOG000039963 OMA:CCKALCA
NextBio:20883262 ArrayExpress:B0S5D8 Bgee:B0S5D8 Uniprot:B0S5D8
Length = 1759
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 41/166 (24%), Positives = 69/166 (41%)
Query: 88 DERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
D+R G+ E+ H+ + R + +PSP R+ R D ER +R ++R
Sbjct: 708 DDRPRGEQPRDERRGAHNERDRRDNREREQRAPSP-VRQQNRGEDLEREERRDDRRNDRG 766
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHL 207
+ R + + + E +R R E++ +K E+E ER RT ++E
Sbjct: 767 DDRRDDRTREREKERDRER-------EREREREKEREREKEREREAERERERTRERERER 819
Query: 208 PVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
R + R + + ERERE + + RER +RE
Sbjct: 820 EREREEREREREEREREREERERERERERKEREREREQRERERQRE 865
>UNIPROTKB|F1PEZ0 [details] [associations]
symbol:SRSF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104103 EMBL:AAEX03001696
Ensembl:ENSCAFT00000018513 OMA:WESKTHI Uniprot:F1PEZ0
Length = 479
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 48/216 (22%), Positives = 75/216 (34%)
Query: 39 LHRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELG--KVT 96
+ S + G S +R RH S++KS R+Q +E G K
Sbjct: 259 IQNSDNTGKSKSRSPSRHKSKSKSRSRSQERRVEEKRASVSRSRSKEKSRSQEKGPHKSR 318
Query: 97 EREQERNHSRKSDRGTHIGKSSSPS-PRTRRLARARDEGDAERVTERDHERNNGRENGKG 155
R + + SR R K S +R +R+R +ER +R +R++ + K
Sbjct: 319 SRSRSKGGSRSRSRSKDKRKGRKRSREESRSRSRSRSRSKSERSRKRGGKRDSKSGSSKK 378
Query: 156 KLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLT---EKEHERNHSRTSDKEAHLPVSRS 212
K E + R HA+ + + E H T + S+
Sbjct: 379 KKKEDAERSQSRSRSRSASK-EREHAKAEPSQREGRGESADAGTHQETRSRSRSNSKSKP 437
Query: 213 PSPHTKRLRRADAKVTERERENDHSRASDKDIHRER 248
P R R A T R R SR++ + R R
Sbjct: 438 NPPSESRSRSKSASKT-RSRSKSRSRSASRSPSRSR 472
>ZFIN|ZDB-GENE-040426-2822 [details] [associations]
symbol:ppig "peptidyl-prolyl isomerase G
(cyclophilin G)" species:7955 "Danio rerio" [GO:0006457 "protein
folding" evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
ZFIN:ZDB-GENE-040426-2822 GO:GO:0006457 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 KO:K09566 CTD:9360 HOVERGEN:HBG048162
HOGENOM:HOG000115659 HSSP:Q27450 EMBL:BC044189 IPI:IPI00493837
RefSeq:NP_998629.1 UniGene:Dr.18174 ProteinModelPortal:Q7ZYY1
SMR:Q7ZYY1 PRIDE:Q7ZYY1 GeneID:406773 KEGG:dre:406773
InParanoid:Q7ZYY1 NextBio:20818287 ArrayExpress:Q7ZYY1 Bgee:Q7ZYY1
Uniprot:Q7ZYY1
Length = 687
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 43/173 (24%), Positives = 75/173 (43%)
Query: 89 ERELGKVTEREQ--ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEG-DAERVTERDHE 145
E+E K E+++ ER SR ++G + + S R +R ++RD G D + R+ +
Sbjct: 519 EKEKSKEVEKKKNGERERSRSKEKGRDVSRRSRSRGRGQR-GQSRDRGRDRRHSSSRERK 577
Query: 146 ---RNNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSD 202
R+ RE +G+ E R R+ E+ + K +E E R D
Sbjct: 578 TSHRSRSRERARGRDAEDRRKSADNKSRETRGR-DRSSKERSSQKQRSREREDRQKRRKD 636
Query: 203 KEAHLPVSRSPSPHTKRLRRADAKVTE-RERENDHSRASDKDIHRERVSERET 254
K S S + KR +R + + +ER D S++ KD ++ S ++
Sbjct: 637 KS---DTGSSDSDNDKRKKRKTSDSPKSKERAKDKSKSPRKDAKKKDSSSSDS 686
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 51/228 (22%), Positives = 85/228 (37%)
Query: 38 VLHRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXD---ERELGK 94
V R R S R+++R R+KS +R D E+E K
Sbjct: 422 VSKRDKSRSPSKGRDRKRDKHRSKSRERDARKKPDADAEKKKSRSRSKSKDKKREKEKSK 481
Query: 95 VTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGK 154
+ ++ R+ S++ DR K R++ RA+D G+ E+ E + ++N RE +
Sbjct: 482 KPDDKRGRSASKEKDRKEKNDKEVEQKDRSKE--RAKD-GEKEKSKEVEKKKNGERERSR 538
Query: 155 GK-LGEXXXXXXXXXXXXXXKRLR-----RAHAEKDADKLTEKEHERNHSRTSDKEAHLP 208
K G + R R H+ K + + R +R D E
Sbjct: 539 SKEKGRDVSRRSRSRGRGQRGQSRDRGRDRRHSSSRERKTSHRSRSRERARGRDAEDR-- 596
Query: 209 VSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
+S ++ R D ER + SR + D + R + +TGS
Sbjct: 597 -RKSADNKSRETRGRDRSSKERSSQKQRSRERE-DRQKRRKDKSDTGS 642
>MGI|MGI:1914289 [details] [associations]
symbol:Rbm25 "RNA binding motif protein 25" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=ISO] InterPro:IPR000504 InterPro:IPR002483
InterPro:IPR012677 Pfam:PF00076 Pfam:PF01480 PROSITE:PS50102
PROSITE:PS51025 SMART:SM00311 SMART:SM00360 MGI:MGI:1914289
GO:GO:0005737 GO:GO:0006915 GO:GO:0008380 GO:GO:0000166
GO:GO:0016607 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
Gene3D:1.20.1390.10 GO:GO:0000381 CTD:58517 eggNOG:NOG250187
KO:K12822 OMA:EDINAME OrthoDB:EOG498V0R SUPFAM:SSF101233
EMBL:AK011184 EMBL:AK011403 EMBL:AK076553 EMBL:AK142132
EMBL:AK151910 EMBL:AK164367 EMBL:BC158104 EMBL:BC010792
EMBL:BC066150 EMBL:BC067400 IPI:IPI00421119 IPI:IPI00662049
IPI:IPI00928541 RefSeq:NP_081625.3 UniGene:Mm.46005
ProteinModelPortal:B2RY56 SMR:B2RY56 IntAct:B2RY56 STRING:B2RY56
PhosphoSite:B2RY56 PaxDb:B2RY56 PRIDE:B2RY56
Ensembl:ENSMUST00000048155 GeneID:67039 KEGG:mmu:67039
UCSC:uc007odj.1 UCSC:uc007odl.1 GeneTree:ENSGT00700000104356
InParanoid:Q8BVT8 NextBio:323382 Bgee:B2RY56 Genevestigator:B2RY56
Uniprot:B2RY56
Length = 838
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 44/167 (26%), Positives = 67/167 (40%)
Query: 90 RELGKV--TEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERN 147
RE+ K T ++ E +K I K R R R R E + ER ER+ E+
Sbjct: 278 REISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKE 337
Query: 148 NGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHL 207
RE + + + + R E+D D+ E+ +RN R+ +E
Sbjct: 338 KERERERERDRDRDRT-----------KERDRDRERDRDRDRERSSDRNKDRSRSREKSR 386
Query: 208 PVSRSPSPHTKRLR-RADAKVTERERENDHSRASDKDIHRERVSERE 253
R +R R R + ERERE + R +KD R+R + E
Sbjct: 387 DREREREREREREREREREREREREREREREREREKDKKRDREEDEE 433
>UNIPROTKB|F1NJ03 [details] [associations]
symbol:SRSF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0048025 GeneTree:ENSGT00700000104103 OMA:KDRGETR
EMBL:AADN02043941 IPI:IPI00581723 Ensembl:ENSGALT00000002149
Uniprot:F1NJ03
Length = 439
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 44/210 (20%), Positives = 84/210 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS R S +R + SSR+KS R++ ++E + +E
Sbjct: 159 RSRSRHSHKSRSRSASSSRSKS--RSRSRSVSRSRSKSRSRSKSRSRGQKEKSRTPSKED 216
Query: 101 E-RNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
+ R+ SR +++ + KS S T + DE + R ++ R+ +G+ E
Sbjct: 217 KSRSRSRSAEKLRN--KSKDKSEGTLHNS---DEKEKSRSRSKEKSRSRSGSKDRGETRE 271
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDA-DKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTK 218
K R+ + ++ + KE +N R+ D S S S +K
Sbjct: 272 SLRSRSKDREKSISKARSRSKSRNESRSRSHSKEKRKNRKRSRDDSRSRSRSCSKSEKSK 331
Query: 219 RLRRADAKVTERERENDHSRASDKDIHRER 248
R + D+K + +++ D SR + + +E+
Sbjct: 332 RRSKRDSKPSSKKKRKD-SREQSRSVSKEK 360
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 44/209 (21%), Positives = 83/209 (39%)
Query: 40 HRSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXX-XXDERELGKVTER 98
H+S R +S +R K R SR+ S R++ +++ +
Sbjct: 166 HKSRSRSASSSRSKSRSRSRSVSRSRSKSRSRSKSRSRGQKEKSRTPSKEDKSRSRSRSA 225
Query: 99 EQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLG 158
E+ RN S+ GT R+R ++R ++ +R R + R K +
Sbjct: 226 EKLRNKSKDKSEGTLHNSDEKEKSRSRSKEKSRSRSGSK---DRGETRESLRSRSKDR-- 280
Query: 159 EXXXXXXXXXXXXXXKRLRRAHA-EKDADKLTEKEHERNHSRTSDK-EAHLPVSRSPSPH 216
E + R+H+ EK ++ ++ R+ SR+ K E S+ S
Sbjct: 281 EKSISKARSRSKSRNESRSRSHSKEKRKNRKRSRDDSRSRSRSCSKSEKSKRRSKRDSKP 340
Query: 217 TKRLRRADAKVTERE--RENDHSRA-SDK 242
+ + +R D++ R +E +H ++ SDK
Sbjct: 341 SSKKKRKDSREQSRSVSKEKEHLKSESDK 369
Score = 115 (45.5 bits), Expect = 0.00093, P = 0.00093
Identities = 48/203 (23%), Positives = 77/203 (37%)
Query: 41 RSSHRGSSPAREKERHSSRA-KSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTERE 99
RS R S +EK R S+ KS R++ DE+E + +E
Sbjct: 197 RSKSR-SRGQKEKSRTPSKEDKSRSRSRSAEKLRNKSKDKSEGTLHNSDEKEKSRSRSKE 255
Query: 100 QERNHSRKSDRG-THIGKSSSPSPRTRRLARARDEGDAERVTE-RDHERNNGRENGKGKL 157
+ R+ S DRG T S R + +++AR + + R H + R+N K
Sbjct: 256 KSRSRSGSKDRGETRESLRSRSKDREKSISKARSRSKSRNESRSRSHSKEK-RKNRKRSR 314
Query: 158 GEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHT 217
+ KR + ++ + K + E++ S + +KE HL S S
Sbjct: 315 DDSRSRSRSCSKSEKSKRRSKRDSKPSSKKKRKDSREQSRSVSKEKE-HLK-SESDKKEA 372
Query: 218 K-RLRRADAKVTERERENDHSRA 239
K A A V R R S++
Sbjct: 373 KGEGEDAAAHVASRSRSRSISKS 395
>UNIPROTKB|P09406 [details] [associations]
symbol:snrnp70 "U1 small nuclear ribonucleoprotein 70 kDa"
species:8355 "Xenopus laevis" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0043484
"regulation of RNA splicing" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 InterPro:IPR022023
Pfam:PF12220 EMBL:X12430 PIR:S02016 UniGene:Xl.5366
ProteinModelPortal:P09406 Xenbase:XB-GENE-992825 HOVERGEN:HBG012300
Uniprot:P09406
Length = 471
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 49/205 (23%), Positives = 83/205 (40%)
Query: 51 REKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHSRKSDR 110
RE+ER R +S +R + ++ E + E+ ++++ + D
Sbjct: 227 RERER-DRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSKDKDKEKDKDN 285
Query: 111 GTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGEXXXXXXXXXX 169
K S S R R+ R RD E ERV E ++ ++ ++G+
Sbjct: 286 KDRDRKRRSRS-RERKRERDRDREKKEERVEAEVPEADDAPQDD-AQIGDLGIDGIELKQ 343
Query: 170 XXXXKRLRRAHAEKDADKLT-EKEHERNHSRTSDKE-AHLPVSRSPSPHTKRLRRADAKV 227
K R E+D D+ EK+ +++ R D+ +H R R RR D +
Sbjct: 344 EPEEKS-RERDRERDRDREKGEKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRRRD-RD 401
Query: 228 TERERENDHSRASDKDIHRERVSER 252
+RER+ DH R D+ E+ ER
Sbjct: 402 RDRERDKDHKRERDRGDRSEKREER 426
>MGI|MGI:1913875 [details] [associations]
symbol:Sfrs18 "serine/arginine-rich splicing factor 18"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:1913875 GO:GO:0016607
EMBL:AL772187 eggNOG:NOG129831 HOVERGEN:HBG062408 OrthoDB:EOG444KM4
EMBL:AK017507 IPI:IPI00808191 UniGene:Mm.100117
ProteinModelPortal:A2AJT4 STRING:A2AJT4 PhosphoSite:A2AJT4
PaxDb:A2AJT4 PRIDE:A2AJT4 Ensembl:ENSMUST00000098238
GeneTree:ENSGT00700000104061 InParanoid:A2AJT4 Bgee:A2AJT4
CleanEx:MM_SFRS18 Genevestigator:A2AJT4 Uniprot:A2AJT4
Length = 805
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 52/217 (23%), Positives = 84/217 (38%)
Query: 42 SSHRGSSPAREKERHSSRAKSP----KRAQXXXXXXXXXXXXXXXXXXXXDERELGKVT- 96
+S R SSP R K SR++SP +R++ D R + +
Sbjct: 545 TSSRSSSPKRRKR--PSRSRSPPAKARRSRSRSYSRRVKVDSSRTRGKLRDRRRSNRSSI 602
Query: 97 EREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTE-RDHERNNGRENGKG 155
ERE+ RN S DR +S S RT R +R+R D ++ + R + N ++ KG
Sbjct: 603 ERERRRNRSPSRDRRR--SRSRSRDRRTNRSSRSRSR-DRRKIEDPRGNLSGNSHKH-KG 658
Query: 156 KLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKE-HERNHSRTSDKEAHLPVSRSPS 214
+ E +R + +++ DK EK+ E + S ++ L R
Sbjct: 659 EAKEQDRKKERSRSVDKDRRKKDKERDRELDKRKEKQKREEKDFKFSSQDDRLKRKRESE 718
Query: 215 PHTKRLRRADAKVTERERENDHSRASDKDIHRERVSE 251
R KV + D + + KD R S+
Sbjct: 719 RTFCRSGSISVKVIRHDSRQDSKKNATKDSKRHSGSD 755
>UNIPROTKB|A7MB38 [details] [associations]
symbol:SFRS4 "SFRS4 protein" species:9913 "Bos taurus"
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0048025
eggNOG:COG0724 HOVERGEN:HBG002295 GeneTree:ENSGT00700000104103
HOGENOM:HOG000276234 KO:K12893 CTD:6429 OMA:REHAKSE
OrthoDB:EOG41C6X9 EMBL:DAAA02006322 EMBL:BC151318 IPI:IPI00692721
RefSeq:NP_001094701.1 UniGene:Bt.28464 STRING:A7MB38
Ensembl:ENSBTAT00000037984 GeneID:614310 KEGG:bta:614310
InParanoid:A7MB38 NextBio:20899050 Uniprot:A7MB38
Length = 493
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 59/259 (22%), Positives = 94/259 (36%)
Query: 3 RNLSNHSESPVRDQGGXXXXXXXXXXXXXXXXXXXVLHRSSHRGSSPAREKERHSSRAKS 62
R+ S SP +D+ + S G S +R RH S+++S
Sbjct: 241 RSKKEKSRSPSKDKSRSRSRSADKRRSKSKDPAEEKVQNSDRTGKSKSRSPSRHKSKSRS 300
Query: 63 PKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ--ERNHSRKSDRGTHIG-KSSS 119
R+Q E+ L K R Q R+ SR + G K S
Sbjct: 301 --RSQERGAEEARGSASRSRSK----EKSLRKSRSRSQGGSRSRSRSKSKDKRKGRKRSR 354
Query: 120 PSPRTRRLARARDEGDAERVTERDHERNNGRENG---KGKLGEXXXXXXXXXXXXXXKRL 176
R+R +R++ E +R +RD + +G +G K K + K
Sbjct: 355 EESRSRSRSRSKSERSRKRGGKRDSKSGSGGGSGSSKKKKKDDADRSQSRSRSRSGSKER 414
Query: 177 RRAHAEK-------DADKLTEKEHERNHSRTSDK-EAHLPV---SRSPSPHTKRLR---- 221
RA +E + + + R+ SR++ K + +LP SRS S R R
Sbjct: 415 ERAKSESGQREGRGEGEDAGANQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSR 474
Query: 222 -RADAKVTERERENDHSRA 239
R+ ++ R R HSR+
Sbjct: 475 SRSGSRSPSRSRSRSHSRS 493
>ASPGD|ASPL0000005981 [details] [associations]
symbol:AN6342 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 PROSITE:PS50089 GO:GO:0008270
EMBL:AACD01000107 EMBL:BN001301 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG12793 RefSeq:XP_663946.1
ProteinModelPortal:Q5AZD8 EnsemblFungi:CADANIAT00006643
GeneID:2871238 KEGG:ani:AN6342.2 HOGENOM:HOG000166357 OMA:TQDEIPF
OrthoDB:EOG44J5T1 Uniprot:Q5AZD8
Length = 968
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 55/231 (23%), Positives = 86/231 (37%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+SS R S AR + R R++S R++ D + + ER +
Sbjct: 620 QSSSRSISRARSRSRSKPRSRSRSRSRVPSRSSSRRRYRPRSRSVEDDATDYDRPRERRR 679
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERV--TERDHERNNGRENGKG-KL 157
+H + +S SPS + R + E D R + R H R + + G +
Sbjct: 680 RPHHDERDRTAEDERRSRSPSIDSHRSSLRDKERDRRRARRSRRSHRRRSRSRSASGDRN 739
Query: 158 GEXXXXXXXXXXXXXXK-RLRRA-----HAE-KDADKLTEKEHERNH-SRTSDKEAHLPV 209
G+ K R R A H KD E++ ER+ SR D+E
Sbjct: 740 GDSRDTDRFAEERSSSKPRSRNADTLDTHRSGKDRSSRREEDRERDRDSRRRDRERDRDR 799
Query: 210 SRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSER----ETGS 256
R R R + K ER+R+ + R D+D R+R R E+ +
Sbjct: 800 DRDRDRDRDRDRIRE-KERERDRDRERPRERDRDRERDRKRSRRDRSESAA 849
>FB|FBgn0032388 [details] [associations]
symbol:CG6686 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] EMBL:AE014134 GO:GO:0022008
HSSP:P01096 GO:GO:0071011 GO:GO:0000398 KO:K11984
InterPro:IPR005011 PANTHER:PTHR14152 Pfam:PF03343
GeneTree:ENSGT00390000007071 OMA:VAADVIN UniGene:Dm.7251
GeneID:34608 KEGG:dme:Dmel_CG6686 FlyBase:FBgn0032388
ChiTaRS:CG6686 GenomeRNAi:34608 NextBio:789290 EMBL:AY058525
RefSeq:NP_723700.1 IntAct:Q95TU2 MINT:MINT-1619577 STRING:Q95TU2
EnsemblMetazoa:FBtr0089572 UCSC:CG6686-RA InParanoid:Q95TU2
Uniprot:Q95TU2
Length = 970
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 53/212 (25%), Positives = 81/212 (38%)
Query: 42 SSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQE 101
S HR + KE K +R + + V + Q
Sbjct: 45 SRHRHHKHKKHKEHRHKHHKQKERERANEVISLEESDSDSFSFFSGSDCVEVPVQAQVQA 104
Query: 102 RNHSRKSDRGTHIGKSSSPSPRTRRLARARD-EGDAERVTERDHERNNGRENGKGKLGEX 160
+ R + ++ K S R R L R R+ E D ER +RD E+ RE K +L E
Sbjct: 105 QAKLRDARESSNRDKERD-SGRDRELLRERERERDRERERDRDREKEREREREKERLRER 163
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRL 220
+R+R E++ ++L E+E ER R +E P S H +
Sbjct: 164 EEREREREK----ERIR----EREKERLRERERERERERV--RELTAPPPPQISKHAEYE 213
Query: 221 RRADAKVTERERENDHSRASDKDIHRERVSER 252
R + ++ ERE D + S ++ RER ER
Sbjct: 214 SRREREI---ERERDARKRSGRERERERNRER 242
>DICTYBASE|DDB_G0287625 [details] [associations]
symbol:DDB_G0287625 species:44689 "Dictyostelium
discoideum" [GO:0005615 "extracellular space" evidence=IDA]
dictyBase:DDB_G0287625 GO:GO:0005615 EMBL:AAFI02000103
RefSeq:XP_637128.1 EnsemblProtists:DDB0187557 GeneID:8626223
KEGG:ddi:DDB_G0287625 eggNOG:NOG285146 OMA:ESTERNE Uniprot:Q54K36
Length = 981
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 47/184 (25%), Positives = 75/184 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS RG S +R R +S+ ++ R++ R + R
Sbjct: 277 RSDSRGRSRSRSDSRKNSKRQTKSRSRSESRLPDKNYSSKRHQNSRKRNRSYSRSRTRSW 336
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEG-DAERVTERDHERNNGRENGKGKLGE 159
R+ +R R + G++ SPR R+RD+ D R ERD +RN R+ + + E
Sbjct: 337 SRSRTRSRSRRRYGGRTFR-SPR-----RSRDDSRDRGRDRERDRDRNRCRDRDRDRERE 390
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDADKLTEK--EHERNHSRTSDKEA--HLPVSRSPSP 215
R R + E+D + E+ E ERN +R D+E + RS SP
Sbjct: 391 RERRLRDRNRD----RERDGYRERDRGRYRERGGERERNRNRDRDRERDRNRDRDRSQSP 446
Query: 216 HTKR 219
H ++
Sbjct: 447 HNEK 450
>DICTYBASE|DDB_G0270880 [details] [associations]
symbol:gflC "PHD zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
dictyBase:DDB_G0270880 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG243978 RefSeq:XP_001134472.1
ProteinModelPortal:Q1ZXQ2 EnsemblProtists:DDB0231781 GeneID:8616983
KEGG:ddi:DDB_G0270880 InParanoid:Q1ZXQ2 OMA:HECEDEA Uniprot:Q1ZXQ2
Length = 1720
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 42/164 (25%), Positives = 70/164 (42%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
E+E+ K E+E+ER ++ + T K + E + E+ E++ ER
Sbjct: 824 EKEIEKEKEKEREREKEKERETETETEKEKEKEKEKEKEKEKEKEKEKEKEREKERERER 883
Query: 149 GRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLP 208
RE K K E K + E++ +K EKE +R R D+E L
Sbjct: 884 EREREKEKEKEKEKEKE--------KEKEKREKEREREKEREKE-KREKERERDRE-QLE 933
Query: 209 VSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRERVSER 252
+ + +R R + + +ERE D R D+++ RE+ ER
Sbjct: 934 IQQ----REQREREREQREKSQERERDRERERDREL-REKERER 972
>ASPGD|ASPL0000001876 [details] [associations]
symbol:AN5949 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
EMBL:BN001301 EMBL:AACD01000101 InterPro:IPR019339 Pfam:PF10197
SMART:SM01083 InterPro:IPR022209 Pfam:PF12542 RefSeq:XP_663553.1
EnsemblFungi:CADANIAT00007078 GeneID:2871034 KEGG:ani:AN5949.2
eggNOG:NOG296370 HOGENOM:HOG000163249 OMA:VERDSIN OrthoDB:EOG4V46JB
Uniprot:Q5B0I1
Length = 415
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 44/168 (26%), Positives = 72/168 (42%)
Query: 89 ERELGKVT--EREQERNHSRKSDRGTHIGKSSSPSPRTRRLARA-RDEGDAERVTERDHE 145
ERE G+ ERE+ER H + D G +S R+R +R+ R E D R +R+H+
Sbjct: 165 EREQGRERHQERERERGHRHRRDSGNDSHRSHRHRRRSRSRSRSPRVEKDDRRHRDREHD 224
Query: 146 RNNGRE-NGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKE 204
R + R+ +G+ + +R RA A + A ++ + R D++
Sbjct: 225 RRSHRDRDGERENRVERVYHSSRRDHDRDERYDRA-ARRSASPRPDRRRDDRRDRDQDQD 283
Query: 205 AHLPV-SRSPSPHTKRLRRADAKVTEREREND---HSRASDKDIHRER 248
SRS + R D R+R D HSR + D + ++
Sbjct: 284 YRRDRNSRSSRRDARSSRDRDTDAFGRDRNRDRGSHSRNGNADANADQ 331
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 50/205 (24%), Positives = 82/205 (40%)
Query: 43 SHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTE--REQ 100
SHR R + R SR++SP R + ERE +V
Sbjct: 192 SHRSH---RHRRRSRSRSRSP-RVEKDDRRHRDREHDRRSHRDRDGERE-NRVERVYHSS 246
Query: 101 ERNHSR--KSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLG 158
R+H R + DR +S+SP P RR R RD D ++ RD + R + +
Sbjct: 247 RRDHDRDERYDRAAR--RSASPRPDRRRDDR-RDR-DQDQDYRRDRNSRSSRRDARSSRD 302
Query: 159 EXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTK 218
R +A+ +AD+ ++ E+ R ++ +A+ + T+
Sbjct: 303 RDTDAFGRDRNRDRGSHSRNGNADANADQHAQELEEQRKRRLAEMQANAQDMEA----TR 358
Query: 219 RLRRADAK-VTERERENDHSRASDK 242
R R A+ + E++RE D R SD+
Sbjct: 359 RQRVAEVTALEEKQREEDDKRRSDR 383
>GENEDB_PFALCIPARUM|PFL0625c [details] [associations]
symbol:PFL0625c "eukaryotictranslation
initiation factor 3 subunit 10, putative" species:5833 "Plasmodium
falciparum" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISS] [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
GO:GO:0006446 Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AE014188
GO:GO:0003743 GO:GO:0005852 KO:K03254 RefSeq:XP_001350534.1
ProteinModelPortal:Q8I5S6 IntAct:Q8I5S6 MINT:MINT-1551532
PRIDE:Q8I5S6 EnsemblProtists:PFL0625c:mRNA GeneID:811178
KEGG:pfa:PFL0625c EuPathDB:PlasmoDB:PF3D7_1212700
HOGENOM:HOG000280986 OMA:RENDISK ProtClustDB:CLSZ2500953
Uniprot:Q8I5S6
Length = 1377
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 42/160 (26%), Positives = 68/160 (42%)
Query: 88 DEREL-GKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER 146
D R+ G+ +R++ER+ R DR H R R R RD D +R +RD +R
Sbjct: 1070 DRRDWSGRDRDRDRERDRDRDRDR-EHRRDRDRDRERDRDRDRERDR-DRDRERDRDRDR 1127
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ R+ + + + R R ++D D+ ++ +R+ R D++
Sbjct: 1128 EHRRDRDRDRERDRDRDRERD-------RDRDRERDRDRDREHRRDRDRDRERDRDRDRE 1180
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHR 246
R R R D + +RERE D R D+DI R
Sbjct: 1181 RDRDRDRERDRDRDRERD-RDRDRERERDRDRDRDRDIKR 1219
>UNIPROTKB|Q8I5S6 [details] [associations]
symbol:PFL0625c "Eukaryotic translation initiation factor 3
subunit 10, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006446 "regulation of translational initiation"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 GO:GO:0006446
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AE014188 GO:GO:0003743
GO:GO:0005852 KO:K03254 RefSeq:XP_001350534.1
ProteinModelPortal:Q8I5S6 IntAct:Q8I5S6 MINT:MINT-1551532
PRIDE:Q8I5S6 EnsemblProtists:PFL0625c:mRNA GeneID:811178
KEGG:pfa:PFL0625c EuPathDB:PlasmoDB:PF3D7_1212700
HOGENOM:HOG000280986 OMA:RENDISK ProtClustDB:CLSZ2500953
Uniprot:Q8I5S6
Length = 1377
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 42/160 (26%), Positives = 68/160 (42%)
Query: 88 DEREL-GKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHER 146
D R+ G+ +R++ER+ R DR H R R R RD D +R +RD +R
Sbjct: 1070 DRRDWSGRDRDRDRERDRDRDRDR-EHRRDRDRDRERDRDRDRERDR-DRDRERDRDRDR 1127
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ R+ + + + R R ++D D+ ++ +R+ R D++
Sbjct: 1128 EHRRDRDRDRERDRDRDRERD-------RDRDRERDRDRDREHRRDRDRDRERDRDRDRE 1180
Query: 207 LPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHR 246
R R R D + +RERE D R D+DI R
Sbjct: 1181 RDRDRDRERDRDRDRERD-RDRDRERERDRDRDRDRDIKR 1219
>UNIPROTKB|E9PG73 [details] [associations]
symbol:PPIG "Peptidyl-prolyl cis-trans isomerase G"
species:9606 "Homo sapiens" [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160 PRINTS:PR00153
PROSITE:PS00170 PROSITE:PS50072 GO:GO:0005634 GO:GO:0005737
GO:GO:0006457 EMBL:AC093899 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 EMBL:AC016772 HGNC:HGNC:14650 ChiTaRS:PPIG
IPI:IPI00917908 ProteinModelPortal:E9PG73 SMR:E9PG73
Ensembl:ENST00000409714 UCSC:uc010fpx.3 ArrayExpress:E9PG73
Bgee:E9PG73 Uniprot:E9PG73
Length = 739
Score = 121 (47.7 bits), Expect = 0.00042, P = 0.00042
Identities = 55/216 (25%), Positives = 87/216 (40%)
Query: 53 KERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHSRKSD-RG 111
K + RAKS R++ R K + E + ++SD +G
Sbjct: 434 KNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKG 493
Query: 112 THIGKSSSPSPRTRRLARARDEGDAERVTERDHE-RNNGRENG--KGKLGEXXXXXXXXX 168
+S S ++++L +E D + E+D ++ RE KGK
Sbjct: 494 KDQERSRSKE-KSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSR 552
Query: 169 XXXXXKRLR-RAHAEKDADKLTE----KEHE-RNHSRTSDKEAHLPVSRSPSPHTKRLRR 222
+R+R R H ++D + E +E E R R+ +E P RS S +R RR
Sbjct: 553 SRDRSRRVRSRTH-DRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRR-RR 610
Query: 223 ADAKVTERE----RENDHSRASD-KDIHRERVSERE 253
D++ +ERE R D R + K HR+ SE E
Sbjct: 611 RDSRSSEREESQSRNKDKYRNQESKSSHRKENSESE 646
>UNIPROTKB|Q13427 [details] [associations]
symbol:PPIG "Peptidyl-prolyl cis-trans isomerase G"
species:9606 "Homo sapiens" [GO:0006457 "protein folding"
evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016018 "cyclosporin A binding" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002130 InterPro:IPR020892
Pfam:PF00160 PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
GO:GO:0005737 GO:GO:0006457 GO:GO:0005654 GO:GO:0008380
GO:GO:0016607 EMBL:CH471058 GO:GO:0016363 EMBL:AC093899
eggNOG:COG0652 GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GO:GO:0016018 KO:K09566 DrugBank:DB00172 EMBL:AC016772 EMBL:U40763
EMBL:X99717 EMBL:BC001555 IPI:IPI00006298 IPI:IPI00409624
PIR:JC5314 RefSeq:NP_004783.2 UniGene:Hs.727580 PDB:2GW2 PDB:2WFI
PDB:2WFJ PDBsum:2GW2 PDBsum:2WFI PDBsum:2WFJ
ProteinModelPortal:Q13427 SMR:Q13427 IntAct:Q13427
MINT:MINT-1684213 STRING:Q13427 PhosphoSite:Q13427 DMDM:229462749
PaxDb:Q13427 PRIDE:Q13427 Ensembl:ENST00000260970
Ensembl:ENST00000448752 Ensembl:ENST00000462903 GeneID:9360
KEGG:hsa:9360 UCSC:uc002uez.3 UCSC:uc002ufa.3 CTD:9360
GeneCards:GC02P170404 H-InvDB:HIX0029914 HGNC:HGNC:14650
HPA:HPA021788 MIM:606093 neXtProt:NX_Q13427 PharmGKB:PA33585
HOVERGEN:HBG048162 InParanoid:Q13427 OMA:NKKFDHE OrthoDB:EOG43FGWT
PhylomeDB:Q13427 ChiTaRS:PPIG EvolutionaryTrace:Q13427
GenomeRNAi:9360 NextBio:35051 ArrayExpress:Q13427 Bgee:Q13427
CleanEx:HS_PPIG Genevestigator:Q13427 GermOnline:ENSG00000138398
Uniprot:Q13427
Length = 754
Score = 121 (47.7 bits), Expect = 0.00043, P = 0.00043
Identities = 55/216 (25%), Positives = 87/216 (40%)
Query: 53 KERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQERNHSRKSD-RG 111
K + RAKS R++ R K + E + ++SD +G
Sbjct: 449 KNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKG 508
Query: 112 THIGKSSSPSPRTRRLARARDEGDAERVTERDHE-RNNGRENG--KGKLGEXXXXXXXXX 168
+S S ++++L +E D + E+D ++ RE KGK
Sbjct: 509 KDQERSRSKE-KSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSR 567
Query: 169 XXXXXKRLR-RAHAEKDADKLTE----KEHE-RNHSRTSDKEAHLPVSRSPSPHTKRLRR 222
+R+R R H ++D + E +E E R R+ +E P RS S +R RR
Sbjct: 568 SRDRSRRVRSRTH-DRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRR-RR 625
Query: 223 ADAKVTERE----RENDHSRASD-KDIHRERVSERE 253
D++ +ERE R D R + K HR+ SE E
Sbjct: 626 RDSRSSEREESQSRNKDKYRNQESKSSHRKENSESE 661
>FB|FBgn0035253 [details] [associations]
symbol:CG7971 species:7227 "Drosophila melanogaster"
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] EMBL:AE014296 eggNOG:NOG12793 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 KO:K13172 RefSeq:NP_001097475.2
UniGene:Dm.4138 IntAct:A8JNI2 STRING:A8JNI2 PaxDb:A8JNI2
GeneID:38206 KEGG:dme:Dmel_CG7971 UCSC:CG7971-RE
FlyBase:FBgn0035253 OrthoDB:EOG4NK9BZ PhylomeDB:A8JNI2
GenomeRNAi:38206 NextBio:807514 Bgee:A8JNI2 Uniprot:A8JNI2
Length = 1636
Score = 124 (48.7 bits), Expect = 0.00050, P = 0.00050
Identities = 48/223 (21%), Positives = 86/223 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R + P +E ERH R+K +R++ ER+ + +R +
Sbjct: 592 RERSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLRSRERQRSR---ERQRSRERQRSK 648
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERD--HERNNGRENGKGKLG 158
ER S++ R +S R++ R+R + DA R E+ +E+ RE + K
Sbjct: 649 ERQRSKERQRSIERQRSKERQ-RSKERQRSRSK-DALRCKEKPQCNEKERSRERRRSKSK 706
Query: 159 EXXXXXXXXXXXXXXKRL-RRAHAEKDADKLTEKEHERNHS--RTSDKEAHLPVSRSPSP 215
+ + + +R D K ++ +ER S R KE R S
Sbjct: 707 DRQRSKEKHRPKDEQQSVDKRRDRSTDRSKENQRSNERQRSKERQRSKERERSKDRQRSR 766
Query: 216 HTKRLRRADAK-----VTERERENDHSRASDKDIHRERVSERE 253
+R + + ER+R N+ R+ ++ +E+ RE
Sbjct: 767 ERRRSKEGQLSKDRQGLKERQRSNERKRSKERQPSKEKQRSRE 809
>ZFIN|ZDB-GENE-030131-6070 [details] [associations]
symbol:nipblb "nipped-b homolog b (Drosophila)"
species:7955 "Danio rerio" [GO:0007507 "heart development"
evidence=IGI] [GO:0048565 "digestive tract development"
evidence=IGI] [GO:0003146 "heart jogging" evidence=IGI] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR016024 ZFIN:ZDB-GENE-030131-6070 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0007049 GO:GO:0048565 GO:GO:0003146
InterPro:IPR026003 Pfam:PF12765 InterPro:IPR024986 Pfam:PF12830
KO:K06672 GeneTree:ENSGT00390000010427 EMBL:AB630365 EMBL:AL929053
EMBL:BX548163 EMBL:BC129432 IPI:IPI00897175 RefSeq:NP_001154919.2
UniGene:Dr.78039 Ensembl:ENSDART00000086861
Ensembl:ENSDART00000108484 GeneID:794108 KEGG:dre:794108 CTD:794108
ArrayExpress:F1QBY1 Bgee:F1QBY1 Uniprot:F1QBY1
Length = 2876
Score = 132 (51.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 89 ERELGKVTEREQERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNN 148
E E G+ ER ++R ++ R K R++ L + R++ D ++ E+D E+N
Sbjct: 725 EVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKK-RSKDLEKCREK-DQDKELEKDREKNQ 782
Query: 149 GRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLP 208
+E KG+ + K + +A EKD DK EK E++ + +K
Sbjct: 783 DKELEKGREKDQDKELEKGREKDRDKEMEKAR-EKDQDKELEKGREKDQDKELEKGQEKD 841
Query: 209 VSRSPSPHTKRLRRADA-KVTERER----ENDHSRASDKDIHRERVSERE 253
+ ++R D KV E++R E D + +KD RE++ ER+
Sbjct: 842 RDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKD--REKIRERD 889
Score = 44 (20.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 381 ARKPSVRWRL--YVFKAGEMLKEPLYIHRQSCYLFGRERRVADIPTDHPS 428
AR P+ + L Y + ++ EP+YI + + + V ++P+D S
Sbjct: 1501 ARLPTSKRNLRNYRLNSSDVDGEPMYIQMVTALVLQLIQCVVNLPSDKDS 1550
>UNIPROTKB|F1S1V5 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0005634
GO:GO:0005737 GO:GO:0006457 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00550000074595 KO:K09566 OMA:NKKFDHE
EMBL:CU466304 EMBL:CU467932 RefSeq:XP_001926896.1 UniGene:Ssc.16456
Ensembl:ENSSSCT00000017350 GeneID:100155786 KEGG:ssc:100155786
Uniprot:F1S1V5
Length = 753
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 50/215 (23%), Positives = 87/215 (40%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
RS R +EKE+ S+AK +R++ +E + K ++++
Sbjct: 488 RSKERDHENVKEKEKADSKAKDQERSRSKEKSKQLESKS--------NEHDHNKSKDKDR 539
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
R SR +R GK S S RTR +R+RD + RV R H+R+ R + E
Sbjct: 540 -RAQSRSRERDVTKGKHSYNS-RTRERSRSRDR--SRRVRSRSHDRDRSRSKEYHRYREQ 595
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTE--KEHERNHSRTSDKEAHLPVSRSPSPHTK 218
+ KD + + ER S++ +KE + S H K
Sbjct: 596 EYRRRGRSRSRERRATPGRSRSKDRRRRRRDSRSSEREESQSRNKEKYRN-QEGKSSHRK 654
Query: 219 RLRRADAKVTERERENDHSRASDKDIHRERVSERE 253
+ ++ + R DHS ++ +RE+ ++R+
Sbjct: 655 ENSEGEKRMYSKNR--DHSSSNS---NREKKADRD 684
>UNIPROTKB|F1PJD3 [details] [associations]
symbol:TRAF3IP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR018799 PANTHER:PTHR31363 OMA:RSKNSVE
GeneTree:ENSGT00700000104144 EMBL:AAEX03014498 EMBL:AAEX03014499
EMBL:AAEX03014500 EMBL:AAEX03014501 Ensembl:ENSCAFT00000019760
Uniprot:F1PJD3
Length = 693
Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
Identities = 48/218 (22%), Positives = 79/218 (36%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+S + ARE+E + K KR RE K E+ +
Sbjct: 144 KSQELDNKNAREEEPGVHKDKEDKRNSEINERSTSRDGKQKEVKEESKAREKDKEKEKTK 203
Query: 101 ERNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEX 160
E +H R D + R + RD G+ +R +RD +R+ R N GK E
Sbjct: 204 ESDHDRHKDPERDKHREGERERARSRAKQDRDRGNRDR--DRDPDRDRERRNEGGKEKEK 261
Query: 161 XXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPH--TK 218
+R + ++D K+ + EH R R +E P +S S +K
Sbjct: 262 WKDRERER-----ERDKARDRDRDRRKVKDGEHSREPDREKSREPDKPEKKSSSSGEMSK 316
Query: 219 RLRRADAKVTERERENDHSRASDKDIHRERVSERETGS 256
+L K ++ E E + S + + + + R S
Sbjct: 317 KLSDGSVKDSKVEAETEISARASRSVTTKASKRRSKNS 354
>DICTYBASE|DDB_G0291966 [details] [associations]
symbol:DDB_G0291966 "CCHC-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000504 InterPro:IPR001878
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
PROSITE:PS50158 SMART:SM00343 SMART:SM00360 dictyBase:DDB_G0291966
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000186 Gene3D:4.10.60.10 OMA:SKISVEW
eggNOG:NOG77895 RefSeq:XP_001134500.1 ProteinModelPortal:Q1ZXB1
EnsemblProtists:DDB0233327 GeneID:8628419 KEGG:ddi:DDB_G0291966
InParanoid:Q1ZXB1 ProtClustDB:CLSZ2846728 Uniprot:Q1ZXB1
Length = 312
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 47/201 (23%), Positives = 78/201 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
R S R SP+ ++ R SR +S R++ R+ + RE+
Sbjct: 118 RRSRRYRSPSWDR-RDRSRDRSRDRSRDRSRDRSRDRRDRRRDRRDRS-RDRSRDGRRER 175
Query: 101 ERNHSRKSDRGTHIGKSSSPS-PRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
R+ SR R + +S R R R+RD G+ R T RD RNN R+ + +
Sbjct: 176 SRDRSRDRSRDARRNRDTSRDRSRDRSRDRSRDGGNIIRDTSRDRRRNNSRDRSRDR-SR 234
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKR 219
R R +D + +KE +R+ S + ++ A + + S +
Sbjct: 235 SNGGGSRYSSRRDRSRDRSRDRSRDRSRSLKKEKKRDSSLSKERIAAGDAASADSGNN-- 292
Query: 220 LRRADAKVTERERENDHSRAS 240
A+ RER SR++
Sbjct: 293 ---ANGNGRSRERSRSRSRSN 310
>UNIPROTKB|Q08170 [details] [associations]
symbol:SRSF4 "Serine/arginine-rich splicing factor 4"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 GO:GO:0000166 EMBL:AL357500 GO:GO:0016607
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006406
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0048025 eggNOG:COG0724
GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78 HOVERGEN:HBG002295
EMBL:AL590729 KO:K12893 EMBL:L14076 EMBL:BT007415 EMBL:BC002781
EMBL:AC004236 IPI:IPI00000015 PIR:A48133 RefSeq:NP_005617.2
UniGene:Hs.469970 ProteinModelPortal:Q08170 SMR:Q08170
IntAct:Q08170 MINT:MINT-1410521 STRING:Q08170 PhosphoSite:Q08170
DMDM:20981726 PaxDb:Q08170 PeptideAtlas:Q08170 PRIDE:Q08170
DNASU:6429 Ensembl:ENST00000373795 GeneID:6429 KEGG:hsa:6429
UCSC:uc001bro.3 CTD:6429 GeneCards:GC01M029474 H-InvDB:HIX0160019
HGNC:HGNC:10786 HPA:HPA050975 MIM:601940 neXtProt:NX_Q08170
PharmGKB:PA35702 InParanoid:Q08170 OMA:REHAKSE OrthoDB:EOG41C6X9
PhylomeDB:Q08170 ChiTaRS:SRSF4 GenomeRNAi:6429 NextBio:24969
ArrayExpress:Q08170 Bgee:Q08170 CleanEx:HS_SFRS4
Genevestigator:Q08170 GermOnline:ENSG00000116350 Uniprot:Q08170
Length = 494
Score = 117 (46.2 bits), Expect = 0.00066, P = 0.00066
Identities = 47/220 (21%), Positives = 81/220 (36%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+SSH S +R + SR+KS R+Q GK + +
Sbjct: 212 KSSH-SKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSK 270
Query: 101 ERNHSRKSDRGTHIGKSSSPSP-RTRRLARARDEGDAERVTERDHER-NNGRENGKGKLG 158
++ K ++GK S SP R + +++R RV E + GR K L
Sbjct: 271 DQAEE-KIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKS-LR 328
Query: 159 EXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTK 218
+ R R +K + +E R+ SR+ K RS +K
Sbjct: 329 QSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKS-----ERSRKRGSK 383
Query: 219 RLRRADAKVTERERENDHS--RASDKDIHRERVSERETGS 256
R +A + +++ + D S R+ + + +ER + S
Sbjct: 384 RDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESS 423
>MGI|MGI:1890577 [details] [associations]
symbol:Srsf4 "serine/arginine-rich splicing factor 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1890577 GO:GO:0008380 GO:GO:0000166
GO:GO:0016607 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0048025 eggNOG:COG0724 HOVERGEN:HBG002295 OrthoDB:EOG41C6X9
ChiTaRS:SRSF4 EMBL:BC019437 EMBL:AB041587 IPI:IPI00139364
UniGene:Mm.2478 ProteinModelPortal:Q8VE97 SMR:Q8VE97 STRING:Q8VE97
PhosphoSite:Q8VE97 PaxDb:Q8VE97 PRIDE:Q8VE97 CleanEx:MM_SFRS4
Genevestigator:Q8VE97 GermOnline:ENSMUSG00000028911 Uniprot:Q8VE97
Length = 489
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 46/210 (21%), Positives = 80/210 (38%)
Query: 49 PAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDE-RELGKVTEREQERNHSRK 107
P + R SR++S R++ + R + + ++ SR
Sbjct: 177 PGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSRSRS 236
Query: 108 SDRG-THIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXXXXXXX 166
R + KS SPS + +R+R D R +DH + + N G+
Sbjct: 237 QSRSRSKKEKSRSPSKDNKSRSRSRSP-DKSRSKSKDHAEDKLQNNDSA--GKAKSHSPS 293
Query: 167 XXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLRRADA- 225
R + AE++ + + + SR+ +K L SRS S R R D
Sbjct: 294 RHDSKSRSRSQERRAEEERRRSVSRARSQEKSRSQEKS--LLKSRSRSRSRSRSRSKDKR 351
Query: 226 KVTERERENDHSRASDK-DIHRERVSERET 254
K +R R+ SR+ K + R+ S+R++
Sbjct: 352 KGRKRSRDESRSRSRSKSERSRKHSSKRDS 381
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 47/217 (21%), Positives = 84/217 (38%)
Query: 41 RSSHRGSSPAREKERHSSRAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTEREQ 100
+SSH S +R + SR+KS R+Q R R +
Sbjct: 212 KSSH-SKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDNKSRS-RSRSPDKSRSK 269
Query: 101 ERNHSR-KSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGE 159
++H+ K GK+ S SP +R +++R ER E + R+ R + K
Sbjct: 270 SKDHAEDKLQNNDSAGKAKSHSP-SRHDSKSRSRSQ-ERRAEEERRRSVSRARSQEK--- 324
Query: 160 XXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKR 219
R R KD K ++ + + SR+ K SR S
Sbjct: 325 SRSQEKSLLKSRSRSRSRSRSRSKDKRKGRKRSRDESRSRSRSKSER---SRKHSSKRDS 381
Query: 220 LRRADAKVTERERENDHSRASDKDIHRERV-SERETG 255
+ + ++++++ DHSR+ + + +ER ++ E+G
Sbjct: 382 KVSSSSSSSKKKKDTDHSRSPSRSVSKEREHAKAESG 418
>UNIPROTKB|A8E658 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0005634
GO:GO:0005737 GO:GO:0006457 eggNOG:COG0652 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 GeneTree:ENSGT00550000074595
KO:K09566 CTD:9360 HOVERGEN:HBG048162 OMA:NKKFDHE OrthoDB:EOG43FGWT
HOGENOM:HOG000115659 EMBL:DAAA02004279 EMBL:DAAA02004278
EMBL:BC153852 IPI:IPI00714529 RefSeq:NP_001103277.1
UniGene:Bt.21987 SMR:A8E658 Ensembl:ENSBTAT00000040072
GeneID:783720 KEGG:bta:783720 InParanoid:A8E658 NextBio:20926266
Uniprot:A8E658
Length = 753
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 54/235 (22%), Positives = 93/235 (39%)
Query: 40 HRSSHRGSSPAREKERHSS-RAKSPKRAQXXXXXXXXXXXXXXXXXXXXDERELGKVTER 98
H+S+ + R E+ + K KRA+ + E ++ R
Sbjct: 429 HKSNSKEREIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDTKHNRHEEKRMKSR 488
Query: 99 EQERNHS--RKSDRGTHIGKSSSPS---PRTRRLARARDEGDAERVTERDHE---RNNGR 150
+ER+H ++ ++ GK S ++++L +E D + ++D R+ R
Sbjct: 489 SKERDHENVKEKEKPDSKGKEQERSRSKEKSKQLESKNNEHDHNKSKDKDRRAQSRSRER 548
Query: 151 ENGKGKLGEXXXXXXXXXXXXXXKRLR-RAHAEKDADKLTEKEHE-------RNHSRTSD 202
+ K K +R+R R+H D D+ KEH R R+
Sbjct: 549 DMTKSKHSYNSRTKERSRSRDRSRRVRSRSH---DRDRSRSKEHHKYREQEYRRRGRSRS 605
Query: 203 KEAHLPVSRSPSPHTKRLRRADAKVTERERENDHSRASDKDIHRE-RVSERETGS 256
+E RS S +R RR D++ +ERE SR +K ++E R S R+ S
Sbjct: 606 RERRATPGRSRSKDRRR-RRRDSRSSEREESQ--SRNKEKYRNQESRSSHRKENS 657
>UNIPROTKB|E1BDN8 [details] [associations]
symbol:E1BDN8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005739 GO:GO:0005634
GeneTree:ENSGT00700000104035 EMBL:DAAA02050131 EMBL:DAAA02050132
EMBL:DAAA02050133 IPI:IPI00700301 Ensembl:ENSBTAT00000009630
Uniprot:E1BDN8
Length = 519
Score = 116 (45.9 bits), Expect = 0.00092, P = 0.00092
Identities = 43/170 (25%), Positives = 67/170 (39%)
Query: 94 KVTEREQERNHSRKSDRGTHIGKSSSPSP------RTRRLARARDEGDAERVTERDHE-R 146
KV +R ++ ++ GKS R+R R+R R ++ H+ R
Sbjct: 297 KVNQRSYNISNIHNKNKCQQSGKSKGDQSNNLSFFRSRSHNRSRSRQKDRRRSKSPHKKR 356
Query: 147 NNGRENGKGKLGEXXXXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAH 206
+ RE K + K R EKD +K EKE +R R +KE
Sbjct: 357 SKSRERRKSR-SRSRSRDKRKDTREKIKEKERVK-EKDREKEREKERDREKEREKEKERG 414
Query: 207 LPVSRSPSPHTKRLRRADA---KVTERERENDHSRASDKDIHRERVSERE 253
+ ++ R D K ERER+ DH + DK+ +E+ E+E
Sbjct: 415 KNKDKDRDKEREKDRDKDKDKEKDKERERDKDHEKERDKEKEKEQDKEKE 464
>DICTYBASE|DDB_G0281687 [details] [associations]
symbol:DDB_G0281687 "U2 snRNP-associated SURP
motif-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000061
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805
PROSITE:PS50102 PROSITE:PS50128 SMART:SM00360 SMART:SM00648
dictyBase:DDB_G0281687 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0006396 EMBL:AAFI02000042 InterPro:IPR008942
SUPFAM:SSF48464 InterPro:IPR006569 SMART:SM00582 SUPFAM:SSF109905
PROSITE:PS51391 eggNOG:NOG307351 RefSeq:XP_640578.4
ProteinModelPortal:Q54TL3 EnsemblProtists:DDB0252764 GeneID:8623186
KEGG:ddi:DDB_G0281687 OMA:GINYCAI Uniprot:Q54TL3
Length = 951
Score = 119 (46.9 bits), Expect = 0.00095, P = 0.00095
Identities = 38/155 (24%), Positives = 63/155 (40%)
Query: 102 RNHSRKSDRGTHIGKSSSPSPRTRRLARARDEGDAERVTERDHERNNGRENGKGKLGEXX 161
++H +DR + + S S R R R + D +R D +R+ RE + + E
Sbjct: 154 KDHRCGNDRDRDMDRDSRDSYRDRDRDRDSRDRDRDRDYRGDRDRDRDRERDRDRDRERD 213
Query: 162 XXXXXXXXXXXXKRLRRAHAEKDADKLTEKEHERNHSRTSDKEAHLPVSRSPSPHTKRLR 221
R R E+D D+ E++ +R R D+E R R R
Sbjct: 214 RDRERDRGDRDRDRDRDRERERDRDRDRERDRDRERDRDRDRERERDRDRD-----YRDR 268
Query: 222 RADAKVTERERENDHSRASDKDIHRERVSERETGS 256
D + +R+R+ D R D+D R+R S + +
Sbjct: 269 DRDYRDRDRDRDRDRDRDRDRDRDRDRYSSSSSSA 303
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 497 383 0.00091 117 3 11 23 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 80
No. of states in DFA: 615 (65 KB)
Total size of DFA: 247 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.48u 0.13s 36.61t Elapsed: 00:00:02
Total cpu time: 36.50u 0.13s 36.63t Elapsed: 00:00:02
Start: Tue May 21 02:41:06 2013 End: Tue May 21 02:41:08 2013