Query 010909
Match_columns 497
No_of_seqs 185 out of 1323
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 05:56:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010909.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010909hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 4E-114 1E-118 890.3 38.8 418 25-497 22-450 (454)
2 PLN02209 serine carboxypeptida 100.0 2E-105 5E-110 834.4 43.4 421 20-497 12-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 2E-104 4E-109 827.2 41.4 415 24-497 14-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 7E-100 1E-104 798.2 31.0 402 37-494 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.6E-92 3.5E-97 746.3 38.8 391 35-497 35-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 2.2E-75 4.8E-80 590.7 30.4 314 125-497 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 4.7E-66 1E-70 527.2 21.2 380 43-494 72-490 (498)
8 KOG1283 Serine carboxypeptidas 100.0 3.5E-65 7.5E-70 487.6 16.1 392 47-492 3-411 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.0 3.4E-08 7.4E-13 96.5 20.6 129 48-222 3-132 (288)
10 PRK00870 haloalkane dehalogena 98.9 1.9E-07 4E-12 93.9 22.7 141 29-220 7-149 (302)
11 PLN02824 hydrolase, alpha/beta 98.9 1.4E-07 3E-12 94.3 19.3 122 51-221 12-137 (294)
12 PRK03204 haloalkane dehalogena 98.9 1.6E-07 3.4E-12 93.9 18.9 58 410-492 227-285 (286)
13 PHA02857 monoglyceride lipase; 98.9 2.7E-07 5.9E-12 91.1 20.0 124 58-222 9-133 (276)
14 PLN02298 hydrolase, alpha/beta 98.8 6.2E-07 1.3E-11 91.3 21.7 137 48-222 33-170 (330)
15 TIGR03056 bchO_mg_che_rel puta 98.8 7.7E-07 1.7E-11 87.2 20.6 59 410-493 220-278 (278)
16 PLN02385 hydrolase; alpha/beta 98.8 6.5E-07 1.4E-11 92.1 20.5 129 58-222 70-198 (349)
17 TIGR03611 RutD pyrimidine util 98.8 1.1E-07 2.5E-12 91.4 13.3 59 410-493 198-256 (257)
18 PRK10673 acyl-CoA esterase; Pr 98.7 2.7E-07 5.9E-12 89.6 15.4 104 71-219 11-114 (255)
19 TIGR03343 biphenyl_bphD 2-hydr 98.7 2.3E-06 5.1E-11 84.4 22.0 61 408-493 221-281 (282)
20 TIGR02427 protocat_pcaD 3-oxoa 98.7 1.3E-06 2.8E-11 83.1 17.7 60 409-493 192-251 (251)
21 PLN02679 hydrolase, alpha/beta 98.6 2.2E-06 4.8E-11 88.6 20.0 65 410-495 292-357 (360)
22 PRK03592 haloalkane dehalogena 98.6 2.9E-06 6.2E-11 84.8 19.3 115 59-223 16-130 (295)
23 PF12697 Abhydrolase_6: Alpha/ 98.5 2.1E-07 4.6E-12 86.9 8.2 104 79-224 1-104 (228)
24 PLN02578 hydrolase 98.5 3.8E-06 8.3E-11 86.6 17.6 60 409-494 295-354 (354)
25 PRK06489 hypothetical protein; 98.5 2.6E-05 5.6E-10 80.6 23.2 60 410-495 292-357 (360)
26 PLN03084 alpha/beta hydrolase 98.5 5.8E-06 1.3E-10 86.1 17.6 130 45-221 102-232 (383)
27 TIGR02240 PHA_depoly_arom poly 98.4 1.1E-05 2.3E-10 79.9 17.8 117 59-222 11-127 (276)
28 PLN02652 hydrolase; alpha/beta 98.4 4.1E-05 9E-10 80.1 22.3 128 58-222 119-246 (395)
29 KOG4178 Soluble epoxide hydrol 98.4 3.4E-05 7.3E-10 76.8 19.8 139 45-226 20-158 (322)
30 PLN02894 hydrolase, alpha/beta 98.4 3E-05 6.6E-10 81.4 20.4 108 74-221 103-211 (402)
31 PRK10349 carboxylesterase BioH 98.4 3E-06 6.5E-11 82.7 12.0 61 408-493 194-254 (256)
32 KOG4409 Predicted hydrolase/ac 98.3 3.7E-05 8.1E-10 77.0 16.9 85 123-224 114-198 (365)
33 PRK10749 lysophospholipase L2; 98.3 0.00012 2.6E-09 74.7 21.2 125 59-222 40-167 (330)
34 TIGR01738 bioH putative pimelo 98.3 3.1E-05 6.8E-10 73.3 15.8 60 408-492 186-245 (245)
35 PRK14875 acetoin dehydrogenase 98.2 5.8E-05 1.3E-09 77.7 18.3 59 408-494 312-370 (371)
36 TIGR03695 menH_SHCHC 2-succiny 98.2 6.3E-05 1.4E-09 71.1 16.0 105 76-221 1-105 (251)
37 TIGR01607 PST-A Plasmodium sub 98.2 6.4E-05 1.4E-09 76.9 16.3 62 410-494 270-332 (332)
38 COG1506 DAP2 Dipeptidyl aminop 98.2 3E-05 6.4E-10 86.0 14.8 139 52-223 368-509 (620)
39 PLN03087 BODYGUARD 1 domain co 98.1 0.0003 6.5E-09 75.2 21.4 60 410-494 418-478 (481)
40 PRK07581 hypothetical protein; 98.0 0.00096 2.1E-08 68.1 20.7 60 409-493 274-334 (339)
41 PLN02980 2-oxoglutarate decarb 98.0 0.00017 3.7E-09 88.0 17.5 108 72-220 1367-1479(1655)
42 PLN02965 Probable pheophorbida 97.9 0.00019 4.1E-09 70.2 13.5 60 409-493 192-251 (255)
43 PLN02511 hydrolase 97.8 0.00045 9.7E-09 72.3 15.9 135 49-222 73-211 (388)
44 TIGR01249 pro_imino_pep_1 prol 97.7 0.0003 6.4E-09 70.9 10.9 126 49-222 6-131 (306)
45 PF10340 DUF2424: Protein of u 97.7 0.00017 3.7E-09 73.9 8.9 132 62-225 106-239 (374)
46 KOG1455 Lysophospholipase [Lip 97.6 0.0044 9.6E-08 61.2 17.8 129 58-221 36-164 (313)
47 TIGR03100 hydr1_PEP hydrolase, 97.6 0.0043 9.3E-08 61.6 17.6 78 126-222 58-135 (274)
48 PRK00175 metX homoserine O-ace 97.5 0.006 1.3E-07 63.5 18.5 64 410-494 309-373 (379)
49 PRK11126 2-succinyl-6-hydroxy- 97.4 0.00077 1.7E-08 64.8 9.1 100 76-220 2-101 (242)
50 PLN02872 triacylglycerol lipas 97.3 0.0029 6.2E-08 66.3 13.4 61 410-494 325-388 (395)
51 TIGR01840 esterase_phb esteras 96.9 0.0049 1.1E-07 58.6 9.1 54 157-221 77-130 (212)
52 TIGR02821 fghA_ester_D S-formy 96.8 0.019 4.2E-07 56.9 13.0 52 161-223 123-175 (275)
53 PRK05077 frsA fermentation/res 96.8 0.014 3.1E-07 61.6 12.7 79 126-222 223-301 (414)
54 TIGR03101 hydr2_PEP hydrolase, 96.8 0.017 3.7E-07 57.2 12.0 128 59-224 9-137 (266)
55 COG2267 PldB Lysophospholipase 96.7 0.023 5E-07 57.3 12.6 138 46-224 8-145 (298)
56 PLN02211 methyl indole-3-aceta 96.5 0.016 3.4E-07 57.6 9.9 59 410-494 211-269 (273)
57 PLN02442 S-formylglutathione h 96.4 0.04 8.6E-07 55.0 12.3 57 155-224 125-181 (283)
58 COG0596 MhpC Predicted hydrola 96.2 0.043 9.3E-07 51.2 10.8 63 406-492 217-279 (282)
59 PRK10566 esterase; Provisional 96.2 0.053 1.2E-06 52.4 11.5 61 410-493 186-246 (249)
60 PF00561 Abhydrolase_1: alpha/ 95.8 0.019 4.1E-07 54.0 6.4 59 406-489 171-229 (230)
61 COG3509 LpqC Poly(3-hydroxybut 95.8 0.22 4.7E-06 49.4 13.3 125 59-221 44-179 (312)
62 PRK08775 homoserine O-acetyltr 95.7 0.058 1.2E-06 55.3 9.9 62 410-495 277-339 (343)
63 PRK10985 putative hydrolase; P 95.7 0.16 3.4E-06 51.7 12.8 46 410-480 255-300 (324)
64 PRK05855 short chain dehydroge 95.5 0.061 1.3E-06 58.7 9.7 95 59-188 12-106 (582)
65 KOG1515 Arylacetamide deacetyl 95.4 0.13 2.7E-06 52.7 10.8 145 48-224 62-210 (336)
66 TIGR00976 /NonD putative hydro 95.4 0.08 1.7E-06 58.0 9.9 130 58-224 5-135 (550)
67 PRK08775 homoserine O-acetyltr 95.1 0.025 5.4E-07 58.0 4.7 76 124-221 98-173 (343)
68 cd00707 Pancreat_lipase_like P 95.1 0.024 5.2E-07 56.4 4.3 81 125-220 66-146 (275)
69 KOG2564 Predicted acetyltransf 94.9 0.059 1.3E-06 52.8 6.3 107 74-218 72-179 (343)
70 KOG2100 Dipeptidyl aminopeptid 94.8 0.087 1.9E-06 59.8 8.4 145 47-224 498-647 (755)
71 PF00326 Peptidase_S9: Prolyl 94.8 0.027 5.8E-07 53.3 3.7 90 125-225 14-103 (213)
72 KOG1454 Predicted hydrolase/ac 94.6 0.062 1.3E-06 54.8 6.1 60 410-494 264-323 (326)
73 PF10230 DUF2305: Uncharacteri 94.6 0.29 6.3E-06 48.4 10.6 118 76-223 2-124 (266)
74 PRK10115 protease 2; Provision 94.5 0.098 2.1E-06 58.9 7.8 142 52-225 419-563 (686)
75 TIGR03230 lipo_lipase lipoprot 93.7 0.24 5.2E-06 52.4 8.3 81 125-220 73-153 (442)
76 PRK10162 acetyl esterase; Prov 93.6 0.2 4.3E-06 50.9 7.4 63 156-223 135-197 (318)
77 PF00975 Thioesterase: Thioest 93.5 0.31 6.7E-06 46.3 8.1 77 126-221 28-104 (229)
78 TIGR01392 homoserO_Ac_trn homo 93.5 0.16 3.6E-06 52.1 6.6 63 410-493 288-351 (351)
79 PRK06765 homoserine O-acetyltr 93.0 0.25 5.4E-06 51.7 7.1 66 408-494 321-387 (389)
80 PLN00021 chlorophyllase 92.8 0.33 7.1E-06 49.3 7.4 116 73-223 49-168 (313)
81 TIGR01838 PHA_synth_I poly(R)- 92.6 2.5 5.5E-05 46.0 14.3 84 126-224 221-305 (532)
82 PRK11126 2-succinyl-6-hydroxy- 92.3 0.2 4.4E-06 47.8 4.9 54 409-493 187-240 (242)
83 TIGR01392 homoserO_Ac_trn homo 92.3 1.3 2.8E-05 45.5 11.1 134 59-221 15-162 (351)
84 KOG1838 Alpha/beta hydrolase [ 92.1 1.2 2.6E-05 46.4 10.5 123 59-221 104-236 (409)
85 PF10503 Esterase_phd: Esteras 91.0 1.3 2.9E-05 42.5 8.9 26 410-435 169-194 (220)
86 PF06500 DUF1100: Alpha/beta h 90.9 0.14 3.1E-06 53.3 2.3 79 126-222 219-297 (411)
87 PF08386 Abhydrolase_4: TAP-li 90.9 0.81 1.7E-05 38.3 6.5 60 410-494 34-93 (103)
88 PRK11460 putative hydrolase; P 90.7 2.2 4.7E-05 41.2 10.3 34 158-192 86-119 (232)
89 PF12695 Abhydrolase_5: Alpha/ 90.4 0.64 1.4E-05 40.3 5.8 94 78-220 1-94 (145)
90 KOG2281 Dipeptidyl aminopeptid 90.2 1.5 3.2E-05 47.8 9.1 108 74-225 640-766 (867)
91 PLN02454 triacylglycerol lipas 89.4 1 2.2E-05 47.2 7.1 68 152-222 205-272 (414)
92 cd00312 Esterase_lipase Estera 89.1 1.9 4.2E-05 46.3 9.4 34 156-190 157-190 (493)
93 KOG4391 Predicted alpha/beta h 89.0 1.9 4.1E-05 41.0 7.8 131 51-223 56-186 (300)
94 PRK11071 esterase YqiA; Provis 88.0 1.9 4.2E-05 40.2 7.5 55 409-493 135-189 (190)
95 PF00561 Abhydrolase_1: alpha/ 86.7 0.99 2.1E-05 42.1 4.8 78 127-221 2-79 (230)
96 COG0657 Aes Esterase/lipase [L 86.7 5.1 0.00011 40.2 10.3 46 174-225 150-195 (312)
97 PRK11460 putative hydrolase; P 86.4 0.9 2E-05 43.8 4.4 62 410-492 148-209 (232)
98 PF01764 Lipase_3: Lipase (cla 86.0 1.9 4.1E-05 37.5 5.9 62 154-221 45-106 (140)
99 PF07859 Abhydrolase_3: alpha/ 85.2 1.2 2.5E-05 41.7 4.5 63 154-223 47-112 (211)
100 PF00326 Peptidase_S9: Prolyl 84.9 1.7 3.8E-05 40.8 5.5 63 409-492 143-206 (213)
101 PRK10566 esterase; Provisional 84.7 1.2 2.6E-05 42.8 4.4 107 63-193 14-124 (249)
102 PF02230 Abhydrolase_2: Phosph 84.4 4.4 9.6E-05 38.3 8.1 56 156-223 87-142 (216)
103 PRK05855 short chain dehydroge 84.2 1.2 2.5E-05 48.6 4.5 59 410-494 233-291 (582)
104 PLN02571 triacylglycerol lipas 83.2 3.6 7.9E-05 43.1 7.3 69 153-222 204-276 (413)
105 PF11144 DUF2920: Protein of u 82.9 2.4 5.2E-05 44.2 5.7 60 155-224 162-222 (403)
106 cd00741 Lipase Lipase. Lipase 82.8 3.8 8.3E-05 36.4 6.5 44 154-200 9-52 (153)
107 cd00519 Lipase_3 Lipase (class 82.7 3 6.5E-05 39.9 6.2 60 155-222 110-169 (229)
108 PRK05371 x-prolyl-dipeptidyl a 82.2 2.6 5.5E-05 48.2 6.3 87 124-223 278-375 (767)
109 PF05577 Peptidase_S28: Serine 81.2 5 0.00011 42.5 7.8 67 150-226 87-153 (434)
110 PF02129 Peptidase_S15: X-Pro 81.2 3.1 6.6E-05 41.0 5.8 83 126-225 58-140 (272)
111 PF05677 DUF818: Chlamydia CHL 81.0 4.8 0.0001 41.0 6.9 64 124-199 170-234 (365)
112 PF03583 LIP: Secretory lipase 80.3 2.1 4.6E-05 42.9 4.3 66 410-496 219-286 (290)
113 PLN02211 methyl indole-3-aceta 80.2 3.6 7.9E-05 40.6 5.9 107 74-221 16-122 (273)
114 KOG3975 Uncharacterized conser 80.0 14 0.00031 36.0 9.4 56 151-219 90-145 (301)
115 KOG2382 Predicted alpha/beta h 78.6 1.5 3.3E-05 44.1 2.6 53 127-187 82-134 (315)
116 PF12695 Abhydrolase_5: Alpha/ 78.5 3.5 7.7E-05 35.5 4.7 47 405-475 99-145 (145)
117 PF11288 DUF3089: Protein of u 77.2 4 8.6E-05 38.8 4.8 40 155-200 76-115 (207)
118 COG0596 MhpC Predicted hydrola 76.9 6.4 0.00014 36.2 6.3 105 76-223 21-125 (282)
119 PRK10439 enterobactin/ferric e 76.4 20 0.00043 37.9 10.3 36 176-221 288-323 (411)
120 PLN02753 triacylglycerol lipas 76.3 7.4 0.00016 41.9 7.0 72 151-222 285-360 (531)
121 TIGR01249 pro_imino_pep_1 prol 75.8 6.8 0.00015 39.1 6.5 43 410-477 248-290 (306)
122 TIGR01836 PHA_synth_III_C poly 75.7 5.1 0.00011 41.0 5.7 62 409-494 285-349 (350)
123 PF02230 Abhydrolase_2: Phosph 75.7 2.5 5.4E-05 40.1 3.1 59 410-493 155-213 (216)
124 PLN02719 triacylglycerol lipas 75.3 8.2 0.00018 41.5 7.0 72 151-222 271-346 (518)
125 KOG3101 Esterase D [General fu 75.2 37 0.0008 32.4 10.4 157 46-224 8-179 (283)
126 PF08237 PE-PPE: PE-PPE domain 72.8 14 0.0003 35.6 7.5 86 127-220 4-89 (225)
127 TIGR03502 lipase_Pla1_cef extr 72.3 14 0.00031 42.1 8.4 44 151-194 521-573 (792)
128 COG0400 Predicted esterase [Ge 72.0 22 0.00047 33.8 8.4 78 154-242 78-158 (207)
129 PRK13604 luxD acyl transferase 71.5 7.2 0.00016 39.4 5.3 46 410-478 202-247 (307)
130 PF06057 VirJ: Bacterial virul 71.5 6.8 0.00015 36.7 4.7 65 150-223 45-109 (192)
131 COG0400 Predicted esterase [Ge 71.2 4.3 9.4E-05 38.6 3.5 60 409-494 145-204 (207)
132 PLN02324 triacylglycerol lipas 70.8 13 0.00028 39.1 7.1 49 151-200 191-239 (415)
133 PF03283 PAE: Pectinacetyleste 70.5 44 0.00095 34.6 11.0 153 59-222 34-198 (361)
134 KOG1552 Predicted alpha/beta h 70.5 14 0.00031 36.1 6.9 75 127-223 90-165 (258)
135 PF05728 UPF0227: Uncharacteri 69.8 7.5 0.00016 36.3 4.7 50 161-226 47-96 (187)
136 PLN02761 lipase class 3 family 69.7 14 0.00031 39.8 7.3 72 151-222 266-343 (527)
137 COG4099 Predicted peptidase [G 69.6 44 0.00096 33.6 10.0 33 159-191 252-284 (387)
138 PF06342 DUF1057: Alpha/beta h 69.4 35 0.00075 34.1 9.3 90 399-491 201-295 (297)
139 PF05990 DUF900: Alpha/beta hy 69.1 8.6 0.00019 37.2 5.2 67 154-224 74-140 (233)
140 KOG1454 Predicted hydrolase/ac 68.9 11 0.00023 38.5 6.1 62 126-196 87-148 (326)
141 PRK10252 entF enterobactin syn 68.5 29 0.00064 42.0 10.7 102 76-219 1068-1169(1296)
142 smart00824 PKS_TE Thioesterase 67.9 24 0.00051 32.1 7.8 76 125-219 25-100 (212)
143 PLN02733 phosphatidylcholine-s 67.0 14 0.00031 39.3 6.7 48 136-191 130-177 (440)
144 COG2267 PldB Lysophospholipase 66.5 11 0.00023 37.9 5.5 64 408-494 226-293 (298)
145 PRK06765 homoserine O-acetyltr 66.4 11 0.00024 39.5 5.7 53 151-220 142-195 (389)
146 KOG4627 Kynurenine formamidase 66.4 5 0.00011 38.0 2.7 89 136-241 102-190 (270)
147 PRK10985 putative hydrolase; P 66.0 17 0.00037 36.7 6.9 98 59-189 41-144 (324)
148 KOG2183 Prolylcarboxypeptidase 65.7 12 0.00025 39.2 5.4 65 126-197 112-184 (492)
149 PF00151 Lipase: Lipase; Inte 63.6 2.6 5.6E-05 43.2 0.3 71 124-199 103-173 (331)
150 PRK13604 luxD acyl transferase 63.1 55 0.0012 33.1 9.7 125 58-223 18-143 (307)
151 COG2272 PnbA Carboxylesterase 62.3 55 0.0012 35.1 9.8 31 159-190 164-194 (491)
152 PLN02310 triacylglycerol lipas 61.5 18 0.0004 37.9 6.1 65 153-222 185-250 (405)
153 KOG2551 Phospholipase/carboxyh 61.5 18 0.0004 34.6 5.6 58 410-493 163-222 (230)
154 PLN02408 phospholipase A1 58.8 25 0.00055 36.4 6.5 46 154-200 179-224 (365)
155 KOG1552 Predicted alpha/beta h 57.3 14 0.0003 36.1 4.1 59 410-493 192-250 (258)
156 PF11187 DUF2974: Protein of u 56.7 21 0.00045 34.4 5.3 39 157-199 69-107 (224)
157 COG0429 Predicted hydrolase of 55.6 28 0.0006 35.5 6.0 121 58-220 59-185 (345)
158 KOG3724 Negative regulator of 55.2 1.7E+02 0.0037 33.4 12.3 90 76-187 90-193 (973)
159 PLN02802 triacylglycerol lipas 54.9 29 0.00062 37.4 6.3 63 154-221 309-371 (509)
160 PRK04940 hypothetical protein; 53.8 27 0.00058 32.4 5.2 37 176-225 60-96 (180)
161 PF05057 DUF676: Putative seri 53.2 23 0.00051 33.6 5.0 48 152-200 55-102 (217)
162 PLN02847 triacylglycerol lipas 52.4 29 0.00064 38.1 5.9 61 155-223 233-294 (633)
163 KOG2182 Hydrolytic enzymes of 52.3 28 0.00061 37.2 5.7 45 151-199 147-191 (514)
164 PLN00413 triacylglycerol lipas 50.7 22 0.00048 38.0 4.6 39 158-199 269-307 (479)
165 PLN03037 lipase class 3 family 50.5 37 0.00081 36.7 6.3 46 154-199 295-341 (525)
166 PF07819 PGAP1: PGAP1-like pro 50.4 45 0.00097 32.0 6.5 63 154-223 61-126 (225)
167 PF12146 Hydrolase_4: Putative 49.9 89 0.0019 24.6 7.0 78 60-164 2-79 (79)
168 KOG4569 Predicted lipase [Lipi 49.6 34 0.00073 35.1 5.8 59 157-221 155-213 (336)
169 COG4757 Predicted alpha/beta h 49.2 33 0.00072 33.2 5.1 60 127-190 59-119 (281)
170 PLN02934 triacylglycerol lipas 48.9 46 0.001 35.9 6.7 40 157-199 305-344 (515)
171 PF00756 Esterase: Putative es 48.4 44 0.00094 31.9 6.2 37 178-224 117-153 (251)
172 KOG1553 Predicted alpha/beta h 47.2 42 0.00092 34.3 5.7 61 147-222 286-346 (517)
173 PRK05077 frsA fermentation/res 47.1 41 0.00089 35.5 6.1 57 410-494 355-411 (414)
174 PF06259 Abhydrolase_8: Alpha/ 47.0 36 0.00078 31.5 5.0 64 124-194 62-127 (177)
175 PF10081 Abhydrolase_9: Alpha/ 47.0 23 0.00051 35.2 3.9 35 153-187 86-120 (289)
176 PF07519 Tannase: Tannase and 46.8 33 0.00072 36.9 5.4 81 401-494 344-426 (474)
177 COG2945 Predicted hydrolase of 45.8 24 0.00051 33.2 3.5 54 136-200 70-123 (210)
178 PRK11071 esterase YqiA; Provis 45.6 39 0.00084 31.3 5.1 33 160-195 48-80 (190)
179 PF05448 AXE1: Acetyl xylan es 44.1 1.2E+02 0.0026 30.8 8.8 117 58-190 65-189 (320)
180 PLN02162 triacylglycerol lipas 43.9 31 0.00067 36.8 4.5 39 157-198 262-300 (475)
181 KOG3079 Uridylate kinase/adeny 42.7 13 0.00028 34.6 1.3 16 74-89 5-20 (195)
182 PF03959 FSH1: Serine hydrolas 41.4 20 0.00043 33.9 2.4 48 410-482 161-208 (212)
183 PF03583 LIP: Secretory lipase 40.5 88 0.0019 31.2 7.1 66 154-224 46-116 (290)
184 PF03403 PAF-AH_p_II: Platelet 40.4 19 0.0004 37.6 2.2 37 177-224 229-265 (379)
185 PF08840 BAAT_C: BAAT / Acyl-C 40.0 34 0.00073 32.5 3.8 46 164-220 10-55 (213)
186 TIGR01836 PHA_synth_III_C poly 39.9 54 0.0012 33.4 5.6 79 126-224 95-174 (350)
187 COG3208 GrsT Predicted thioest 39.7 54 0.0012 31.9 5.0 59 410-493 176-234 (244)
188 PF09292 Neil1-DNA_bind: Endon 39.1 18 0.00039 24.2 1.2 12 76-87 24-35 (39)
189 PF12740 Chlorophyllase2: Chlo 38.1 66 0.0014 31.7 5.5 66 151-221 62-131 (259)
190 PF08840 BAAT_C: BAAT / Acyl-C 37.3 29 0.00063 32.9 2.9 49 409-476 114-163 (213)
191 PLN02442 S-formylglutathione h 37.2 47 0.001 32.9 4.5 49 408-477 215-264 (283)
192 PF07389 DUF1500: Protein of u 36.4 51 0.0011 26.6 3.5 35 157-199 7-41 (100)
193 PF06821 Ser_hydrolase: Serine 35.7 42 0.0009 30.7 3.5 43 411-479 115-157 (171)
194 PF02450 LCAT: Lecithin:choles 35.2 31 0.00067 36.1 2.9 16 415-430 340-355 (389)
195 PRK14567 triosephosphate isome 34.8 80 0.0017 31.0 5.5 60 154-224 179-238 (253)
196 COG0627 Predicted esterase [Ge 33.9 99 0.0021 31.4 6.2 132 75-224 52-190 (316)
197 PF01083 Cutinase: Cutinase; 33.3 50 0.0011 30.5 3.7 83 128-223 42-125 (179)
198 PRK14566 triosephosphate isome 32.5 84 0.0018 31.0 5.2 60 154-224 189-248 (260)
199 COG1073 Hydrolases of the alph 31.4 1.1E+02 0.0024 29.2 6.1 60 411-493 233-295 (299)
200 KOG1516 Carboxylesterase and r 31.3 2.9E+02 0.0062 30.0 9.8 33 160-193 180-212 (545)
201 KOG2984 Predicted hydrolase [G 30.3 68 0.0015 30.5 3.9 101 51-190 25-128 (277)
202 PF06821 Ser_hydrolase: Serine 29.4 83 0.0018 28.7 4.4 51 162-222 42-92 (171)
203 PF00681 Plectin: Plectin repe 29.2 35 0.00077 23.8 1.5 33 218-250 11-43 (45)
204 COG4425 Predicted membrane pro 27.0 83 0.0018 33.4 4.2 36 152-187 373-408 (588)
205 COG3571 Predicted hydrolase of 26.7 80 0.0017 29.0 3.6 27 172-198 85-111 (213)
206 PF15613 WHIM2: WSTF, HB1, Itc 25.7 1.2E+02 0.0026 20.6 3.4 28 60-87 11-38 (38)
207 KOG2382 Predicted alpha/beta h 24.7 1.4E+02 0.0031 30.2 5.4 61 409-494 252-312 (315)
208 COG3319 Thioesterase domains o 24.4 2.4E+02 0.0051 27.8 6.8 46 150-201 45-90 (257)
209 PF13956 Ibs_toxin: Toxin Ibs, 24.0 25 0.00054 19.6 -0.1 9 12-20 5-13 (19)
210 PF03096 Ndr: Ndr family; Int 23.5 26 0.00056 35.0 -0.1 62 410-496 219-280 (283)
211 PF10503 Esterase_phd: Esteras 22.6 73 0.0016 30.5 2.8 43 169-221 90-132 (220)
212 PF05049 IIGP: Interferon-indu 22.3 45 0.00097 34.7 1.4 62 75-138 33-97 (376)
213 PF08538 DUF1749: Protein of u 22.3 1.6E+02 0.0035 29.7 5.2 70 151-225 82-152 (303)
214 PF07849 DUF1641: Protein of u 22.0 35 0.00076 23.6 0.3 18 358-375 15-32 (42)
215 PRK07868 acyl-CoA synthetase; 21.9 1.4E+02 0.003 35.4 5.5 59 410-493 297-359 (994)
216 KOG2682 NAD-dependent histone 21.3 37 0.00081 32.7 0.5 68 125-199 36-113 (314)
217 KOG2369 Lecithin:cholesterol a 20.1 83 0.0018 33.6 2.7 73 411-494 374-451 (473)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-114 Score=890.31 Aligned_cols=418 Identities=51% Similarity=0.961 Sum_probs=375.2
Q ss_pred cCCCCCCccccCCCCCCCCCCceEEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeee
Q 010909 25 HSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFE 104 (497)
Q Consensus 25 ~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~ 104 (497)
.++++.++|+.|||..+++++++|||||+|+++.+++|||||+||+++|++|||||||||||||||+.|+|.|+|||+++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVK 101 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEc
Confidence 47788899999999987899999999999998889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeec
Q 010909 105 APTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGES 184 (497)
Q Consensus 105 ~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GES 184 (497)
.++ .+|..||||||+.||||||||||||||||+++..++..+|+.+|+|++.||++||++||||++|+|||+|||
T Consensus 102 ~~G-----~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GES 176 (454)
T KOG1282|consen 102 YNG-----KTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGES 176 (454)
T ss_pred CCC-----CcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccc
Confidence 543 589999999999999999999999999999998888889999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCccccccCchhhhccCCCCCHHHHHHHHHHccc---CCCC--C
Q 010909 185 YAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQG---NFYN--P 259 (497)
Q Consensus 185 YgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~q~~~~~~f~~~~gli~~~~~~~~~~~c~~---~~~~--~ 259 (497)
|||||||+||++|+++|+....+.|||||++||||++|+..|..++.+|+|.||+|++++++.+++.|.. ++.+ .
T Consensus 177 YAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~ 256 (454)
T KOG1282|consen 177 YAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDP 256 (454)
T ss_pred ccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCC
Confidence 9999999999999999976556789999999999999999999999999999999999999999999987 3333 4
Q ss_pred CChHHHHHHHHHH-HHhcCCCCcccccc-ccCCCchhHHHhhhccCCccccccCCCCCCchhhhhccccCCCCCCCCCCC
Q 010909 260 LSEACDSKLSEVE-KDIAGLNMYDILEP-CYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDG 337 (497)
Q Consensus 260 ~~~~C~~~~~~~~-~~~~~in~y~i~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (497)
....|.++++.+. ++...++.|+++.+ |.... ... ..+. .+
T Consensus 257 ~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~-------------~~~------~~~~---------------~~--- 299 (454)
T KOG1282|consen 257 SNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTS-------------YEL------KKPT---------------DC--- 299 (454)
T ss_pred chhHHHHHHHHHHHHHhccCchhhhcchhhcccc-------------ccc------cccc---------------cc---
Confidence 4678999999988 77788998888866 86421 000 0000 00
Q ss_pred CCCCccccccCCCCCCCChhhHhhccCcHHHHHhhCCCCCccccccccccccc--cccccCcchHHHHHHHhhcC-ceEE
Q 010909 338 IVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDAGSMIKYHKNLTLRG-YRAL 414 (497)
Q Consensus 338 ~~~~~~~~~~~~~~~c~~~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~c~~~v--~~~~d~~~~~~~~~~Ll~~~-irVL 414 (497)
....+|.+... ++|||+++||+||||+.... ..|+.|++.+ .+..+..++++.+.+++.++ +|||
T Consensus 300 ----------~~~~~c~~~~~-~~ylN~~~VrkALh~~~~~~-~~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvl 367 (454)
T KOG1282|consen 300 ----------YGYDPCLSDYA-EKYLNRPEVRKALHANKTSI-GKWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVL 367 (454)
T ss_pred ----------cccCCchhhhH-HHhcCCHHHHHHhCCCCCCC-CcccccChhhhcccccCccchHHHHHHHhhcCceEEE
Confidence 11367876555 78999999999999998753 2799999998 57788899999999998865 9999
Q ss_pred EEecCCccccCchhHHHHHhhcCCCCCccceeeEeC-CeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHHHHHc
Q 010909 415 IFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSN-GQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLA 493 (497)
Q Consensus 415 iy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~-~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~~fl~ 493 (497)
||+||.|++||++||++||++|+++..++||||+++ +|++||+++|++ |||+||+|||||||.|||++|+.||++||.
T Consensus 368 iysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~-ltf~tVrGaGH~VP~~~p~~al~m~~~fl~ 446 (454)
T KOG1282|consen 368 IYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGG-LTFATVRGAGHMVPYDKPESALIMFQRFLN 446 (454)
T ss_pred EEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecC-EEEEEEeCCcccCCCCCcHHHHHHHHHHHc
Confidence 999999999999999999999999999999999995 899999999997 999999999999999999999999999999
Q ss_pred CCCC
Q 010909 494 GKPL 497 (497)
Q Consensus 494 g~~~ 497 (497)
|+++
T Consensus 447 g~~l 450 (454)
T KOG1282|consen 447 GQPL 450 (454)
T ss_pred CCCC
Confidence 9875
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2.2e-105 Score=834.36 Aligned_cols=421 Identities=41% Similarity=0.853 Sum_probs=364.4
Q ss_pred HHhhhcCCCCCCccccCCCCCCCCCCceEEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcC
Q 010909 20 FSVLTHSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHG 99 (497)
Q Consensus 20 ~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~G 99 (497)
+++++.++++.++|+.|||+.+++++++||||++|+++.+++||||||||+++|+++||+|||||||||||+.|+|.|+|
T Consensus 12 ~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~G 91 (437)
T PLN02209 12 LLVSSHHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENG 91 (437)
T ss_pred HHHhcccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcC
Confidence 34456788888999999999778999999999999877789999999999999999999999999999999999999999
Q ss_pred CeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEE
Q 010909 100 PFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFF 179 (497)
Q Consensus 100 P~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~y 179 (497)
||+++.++..+...++++||+||++.||||||||||||||||+...... .++++.|+++++||+.||++||+++++|||
T Consensus 92 P~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~y 170 (437)
T PLN02209 92 PLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFY 170 (437)
T ss_pred CceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEE
Confidence 9999865322222479999999999999999999999999998766544 355677899999999999999999999999
Q ss_pred EEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCccccccCchhhhccCCCCCHHHHHHHHHHcccCCC--
Q 010909 180 IAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFY-- 257 (497)
Q Consensus 180 i~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~q~~~~~~f~~~~gli~~~~~~~~~~~c~~~~~-- 257 (497)
|+||||||||||.||++|+++++...+++||||||+||||++||..|..++.+|+|.+|+|++++++++++.|.....
T Consensus 171 i~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~ 250 (437)
T PLN02209 171 VVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSV 250 (437)
T ss_pred EEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccC
Confidence 999999999999999999998765455689999999999999999999999999999999999999999999976332
Q ss_pred CCCChHHHHHHHHHHHHhcCCCCcccc-ccccCCCchhHHHhhhccCCccccccCCCCCCchhhhhccccCCCCCCCCCC
Q 010909 258 NPLSEACDSKLSEVEKDIAGLNMYDIL-EPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRD 336 (497)
Q Consensus 258 ~~~~~~C~~~~~~~~~~~~~in~y~i~-~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (497)
.+....|.+++++...|...+|.|++. ..|.... .++.
T Consensus 251 ~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~------------------------~~~~----------------- 289 (437)
T PLN02209 251 DPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDSN------------------------TQHI----------------- 289 (437)
T ss_pred CCChHHHHHHHHHHHHHhhcCCccccccccccccc------------------------cccC-----------------
Confidence 244568999999888888888877643 4464310 0000
Q ss_pred CCCCCccccccCCCCCCCC--hhhHhhccCcHHHHHhhCCCCCccccccccccccccccccCcchHHHHHHHhhcCceEE
Q 010909 337 GIVPSWPQLLNSNSVPCTD--DRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRAL 414 (497)
Q Consensus 337 ~~~~~~~~~~~~~~~~c~~--~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~Ll~~~irVL 414 (497)
...|.+ ...++.|||+++||+||||+.... ..|..|+..+.+..|..++++.+.+++.+|+|||
T Consensus 290 -------------~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~~~~~~~~~~d~~~~~~~~~~~l~~girVL 355 (437)
T PLN02209 290 -------------SPDCYYYPYHLVECWANNESVREALHVDKGSI-GEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSL 355 (437)
T ss_pred -------------CCCcccccHHHHHHHhCCHHHHHHhCCCCCCC-CCCccccchhhcccchhhhHHHHHHHHhcCceEE
Confidence 123532 345788999999999999985433 5899999877777787777777777777899999
Q ss_pred EEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHHHHHcC
Q 010909 415 IFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAG 494 (497)
Q Consensus 415 iy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~~fl~g 494 (497)
||+||.|+|||+.|+++|+++|+|++.++|++|+++++++||+|+|+++|||++|++|||||| |||++|++||++||.|
T Consensus 356 iY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~ 434 (437)
T PLN02209 356 IFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISG 434 (437)
T ss_pred EEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999985699999999999998 7999999999999999
Q ss_pred CCC
Q 010909 495 KPL 497 (497)
Q Consensus 495 ~~~ 497 (497)
+++
T Consensus 435 ~~l 437 (437)
T PLN02209 435 QPL 437 (437)
T ss_pred CCC
Confidence 885
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2e-104 Score=827.16 Aligned_cols=415 Identities=43% Similarity=0.885 Sum_probs=362.5
Q ss_pred hcCCCCCCccccCCCCCCCCCCceEEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeee
Q 010909 24 THSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNF 103 (497)
Q Consensus 24 ~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~ 103 (497)
+.++++.+.|++|||+.+.+++++||||++|+++.+++||||||||+++|+++||||||||||||||+.|+|.|+|||++
T Consensus 14 ~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~ 93 (433)
T PLN03016 14 YHHVDSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGL 93 (433)
T ss_pred HhcccccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCcee
Confidence 34556778999999997789999999999998777899999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEee
Q 010909 104 EAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGE 183 (497)
Q Consensus 104 ~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GE 183 (497)
+.+...+...+++.|++||++.||||||||||||||||++..... .++++.|+++++||++||++||+|+++||||+||
T Consensus 94 ~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GE 172 (433)
T PLN03016 94 KFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGD 172 (433)
T ss_pred eccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEcc
Confidence 854222223579999999999999999999999999998766544 4555667999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCccccccCchhhhccCCCCCHHHHHHHHHHcccCCCC--CCC
Q 010909 184 SYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLS 261 (497)
Q Consensus 184 SYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~q~~~~~~f~~~~gli~~~~~~~~~~~c~~~~~~--~~~ 261 (497)
||||||||++|++|+++|+...+++||||||+||||++||..|..++.+|+|.+|+|++++++++++.|...+.. +..
T Consensus 173 SYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~ 252 (433)
T PLN03016 173 SYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSN 252 (433)
T ss_pred CccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCch
Confidence 999999999999999988655556899999999999999999999999999999999999999999999764432 345
Q ss_pred hHHHHHHHHHHHHhcCCCCcccccc-ccCCCchhHHHhhhccCCccccccCCCCCCchhhhhccccCCCCCCCCCCCCCC
Q 010909 262 EACDSKLSEVEKDIAGLNMYDILEP-CYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVP 340 (497)
Q Consensus 262 ~~C~~~~~~~~~~~~~in~y~i~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (497)
..|.++++.+..+.+.+|.|+++.+ |.... .+
T Consensus 253 ~~C~~~~~~~~~~~~~~n~yni~~~~~~~~~---------------------------~~-------------------- 285 (433)
T PLN03016 253 TQCLKLTEEYHKCTAKINIHHILTPDCDVTN---------------------------VT-------------------- 285 (433)
T ss_pred HHHHHHHHHHHHHhcCCChhhccCCcccccc---------------------------cC--------------------
Confidence 6899999988889999999999865 52210 00
Q ss_pred CccccccCCCCCCCC--hhhHhhccCcHHHHHhhCCCCCccccccccccccccccccCcchHHHHHHHhhcCceEEEEec
Q 010909 341 SWPQLLNSNSVPCTD--DRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSG 418 (497)
Q Consensus 341 ~~~~~~~~~~~~c~~--~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~Ll~~~irVLiy~G 418 (497)
...|+. ...++.|||+++||+||||+.... .+|+.|+..+.+..|..++++.+.+++.+++|||||+|
T Consensus 286 ---------~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~cn~~v~~~~d~~~~~~~~~~~l~~~irVLiY~G 355 (433)
T PLN03016 286 ---------SPDCYYYPYHLIECWANDESVREALHIEKGSK-GKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSG 355 (433)
T ss_pred ---------CCcccccchHHHHHHhCCHHHHHHhCCCCCCC-CCCccCCcccccccccchhhHHHHHHHhcCceEEEEEC
Confidence 023543 345688999999999999986421 47999999887777777777777777778999999999
Q ss_pred CCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHHHHHcCCCC
Q 010909 419 DHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 497 (497)
Q Consensus 419 d~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~~fl~g~~~ 497 (497)
|.|+|||++|+++|+++|+|++.++|++|+++++++||+|+|+++|||++|++|||||| |||++|++||++||.|+++
T Consensus 356 d~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 356 DHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred CccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999976699999999999998 7999999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=6.6e-100 Score=798.18 Aligned_cols=402 Identities=40% Similarity=0.768 Sum_probs=330.3
Q ss_pred CCCCCCCCCceEEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCccc
Q 010909 37 PGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLH 116 (497)
Q Consensus 37 pg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~ 116 (497)
||++.++++++|||||+|+++.+++||||||||+++|+++|||||||||||||||.|+|+|+|||+++.+ +..+++
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~----~~~~l~ 76 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPD----GPYTLE 76 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETT----STSEEE
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeec----cccccc
Confidence 8888889999999999999778899999999999999999999999999999999999999999999943 236899
Q ss_pred ccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHH
Q 010909 117 VNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (497)
Q Consensus 117 ~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (497)
.||+||++.+|||||||||||||||+.....+..+++++|+++++||++|+++||+++++||||+||||||||||.+|.+
T Consensus 77 ~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 77 DNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp E-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 99999999999999999999999999888777789999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCeeeeeeeeccCCCCCccccccCchhhhccCCCCCHHHHHHHHHHcccC-CCCCCChHHHHHHHHHHH--
Q 010909 197 VMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGN-FYNPLSEACDSKLSEVEK-- 273 (497)
Q Consensus 197 i~~~~~~~~~~~inLkGi~iGng~~dp~~q~~~~~~f~~~~gli~~~~~~~~~~~c~~~-~~~~~~~~C~~~~~~~~~-- 273 (497)
|+++++.+..+.||||||+||||++||..|..++.+|+|.+|+|++++++.+.+.|... ........|.+..+.+..
T Consensus 157 i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 236 (415)
T PF00450_consen 157 ILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQY 236 (415)
T ss_dssp HHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHC
T ss_pred hhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhc
Confidence 99999765557899999999999999999999999999999999999999999999653 122345689988888765
Q ss_pred ----HhcCCCCccccccccCCCchhHHHhhhccCCccccccCCCCCCchhhhhccccCCCCCCCCCCCCCCCccccccCC
Q 010909 274 ----DIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSN 349 (497)
Q Consensus 274 ----~~~~in~y~i~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (497)
+..++|+|+++.+|.... . ... .. ..
T Consensus 237 ~~~~~~~~~n~Ydi~~~~~~~~----------------~------~~~---------------~~-------------~~ 266 (415)
T PF00450_consen 237 AISQCNGGINPYDIRQPCYNPS----------------R------SSY---------------DN-------------SP 266 (415)
T ss_dssp HHHHHHTTSETTSTTSEETT-S----------------H------CTT---------------CC-------------CC
T ss_pred ccccccCCcceeeeeccccccc----------------c------ccc---------------cc-------------cc
Confidence 347899999999874310 0 000 00 00
Q ss_pred CCCCCChhhHhhccCcHHHHHhhCCCCCcccccccccccccc---cccc-CcchHHHHHHHhhcCceEEEEecCCccccC
Q 010909 350 SVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL---FEHD-AGSMIKYHKNLTLRGYRALIFSGDHDMCVP 425 (497)
Q Consensus 350 ~~~c~~~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~c~~~v~---~~~d-~~~~~~~~~~Ll~~~irVLiy~Gd~D~i~n 425 (497)
...|.....+..|||+++||+||||+.... ..|+.|++.|. ...+ ..++++.+++||++++|||||+||.|++||
T Consensus 267 ~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~-~~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n 345 (415)
T PF00450_consen 267 SNDPPDDDYLEAYLNRPDVREALHVPVDSN-VNWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICN 345 (415)
T ss_dssp TTTTTCHHHHHHHHTSHHHHHHTT-STTTS-SS--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-
T ss_pred cccccchhhHHHHhccHHHHHhhCCCcccC-CcccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEE
Confidence 144566777889999999999999973212 58999999772 2234 467788999999999999999999999999
Q ss_pred chhHHHHHhhcCCCCCccceeeEe--CCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHHHHHcC
Q 010909 426 FTGSEAWTRSVGYKIVDKWRPWTS--NGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAG 494 (497)
Q Consensus 426 ~~G~~~~i~~L~w~~~~~~~~w~~--~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~~fl~g 494 (497)
+.|+++|+++|+|++.++|++|.. +++++||+|++++ |||++|++||||||+|||++|++||++||+|
T Consensus 346 ~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~-ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 346 FLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGN-LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETT-EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred eccchhhhhccccCcccccccccccccccccceeEEecc-EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 999999999999999999999987 8999999999986 9999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.6e-92 Score=746.32 Aligned_cols=391 Identities=29% Similarity=0.579 Sum_probs=328.4
Q ss_pred cCCCCCCCCCCceEEEEEEecC-CCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCC
Q 010909 35 QIPGFSGNLPSKHYSGYVTVDE-SHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLP 113 (497)
Q Consensus 35 ~lpg~~~~~~~~~~sGy~~v~~-~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~ 113 (497)
++..-..+.++++|||||+|+. ..+.+||||||||+++|+++||+||||||||||||.|+|.|+|||+++.++ .
T Consensus 35 ~~~~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~-----~ 109 (462)
T PTZ00472 35 GSGWAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETT-----G 109 (462)
T ss_pred CCCccccCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCC-----C
Confidence 4443334456789999999975 457899999999999999999999999999999999999999999999653 4
Q ss_pred cccccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHH
Q 010909 114 KLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTL 193 (497)
Q Consensus 114 ~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~l 193 (497)
+++.|++||++.+||||||||+||||||+... .+..+++++|+|+++||+.|+++||+++++|+||+||||||+|+|.+
T Consensus 110 ~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~ 188 (462)
T PTZ00472 110 DIYNNTYSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPAT 188 (462)
T ss_pred ceeECCcccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHH
Confidence 78999999999999999999999999998654 45677889999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCCeeeeeeeeccCCCCCccccccCchhhhcc-------CCCCCHHHHHHHHHH---cccCCC-----C
Q 010909 194 AYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHG-------MGLISDDLYEEVQNL---CQGNFY-----N 258 (497)
Q Consensus 194 a~~i~~~~~~~~~~~inLkGi~iGng~~dp~~q~~~~~~f~~~-------~gli~~~~~~~~~~~---c~~~~~-----~ 258 (497)
|.+|+++|+.+...+||||||+||||++||..|..++.+|+|. +|+|++++++++.+. |..... .
T Consensus 189 a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~ 268 (462)
T PTZ00472 189 AYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNP 268 (462)
T ss_pred HHHHHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccC
Confidence 9999999876656789999999999999999999999999995 589999999887753 321110 0
Q ss_pred -CCChHHHHHHHHHHHH-----hcCCCCccccccccCCCchhHHHhhhccCCccccccCCCCCCchhhhhccccCCCCCC
Q 010909 259 -PLSEACDSKLSEVEKD-----IAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRA 332 (497)
Q Consensus 259 -~~~~~C~~~~~~~~~~-----~~~in~y~i~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (497)
.....|..+...|.+. ..++|+||++.+|..
T Consensus 269 ~~~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~c~~------------------------------------------- 305 (462)
T PTZ00472 269 DDADSSCSVARALCNEYIAVYSATGLNNYDIRKPCIG------------------------------------------- 305 (462)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcCCChhheeccCCC-------------------------------------------
Confidence 1223454443333221 134455555544411
Q ss_pred CCCCCCCCCccccccCCCCCCCChhhHhhccCcHHHHHhhCCCCCccccccccccccc--cccccC-cchHHHHHHHhhc
Q 010909 333 PVRDGIVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDA-GSMIKYHKNLTLR 409 (497)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~c~~~v--~~~~d~-~~~~~~~~~Ll~~ 409 (497)
+.|++...++.|||+++||+||||+. ..|+.|++.| .+..|. .++.+.++.||++
T Consensus 306 ------------------~~c~~~~~~~~yLN~~~Vq~AL~v~~----~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~ 363 (462)
T PTZ00472 306 ------------------PLCYNMDNTIAFMNREDVQSSLGVKP----ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLED 363 (462)
T ss_pred ------------------CCccCHHHHHHHhCCHHHHHHhCCCC----CCceeCCHHHHHHhhhccccchHHHHHHHHhc
Confidence 35776667889999999999999984 4799999987 455565 3466788999999
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCcc-----ceeeE-eCCeeceEEEEec-----CceEEEEEcCceecCCC
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDK-----WRPWT-SNGQVAGYTQGYE-----NNLTFLTIKGAGHTVPE 478 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~-----~~~w~-~~~~~aGyvk~~~-----~~Ltfv~V~~AGHmVP~ 478 (497)
|+|||||+||.|++||+.|+++|+++|+|++.++ +++|+ ++++++||+|+++ + |+|++|++||||||+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~-l~~~~V~~AGH~vp~ 442 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSG-FSFVQVYNAGHMVPM 442 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCC-eEEEEECCCCccChh
Confidence 9999999999999999999999999999998755 47994 6899999999997 5 999999999999999
Q ss_pred CCcHHHHHHHHHHHcCCCC
Q 010909 479 YKPREALDFYSRFLAGKPL 497 (497)
Q Consensus 479 DqP~~a~~m~~~fl~g~~~ 497 (497)
|||+++++|+++|+.|+++
T Consensus 443 d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 443 DQPAVALTMINRFLRNRPL 461 (462)
T ss_pred hHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999875
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=2.2e-75 Score=590.70 Aligned_cols=314 Identities=43% Similarity=0.856 Sum_probs=271.8
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
.||||||||||||||||++++..+ .++++.|+|++.||+.||++||+|+++||||+||||||||||+||++|+++|+.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998766544 4555666999999999999999999999999999999999999999999988655
Q ss_pred CCCeeeeeeeeccCCCCCccccccCchhhhccCCCCCHHHHHHHHHHcccCCCC--CCChHHHHHHHHHHHHhcCCCCcc
Q 010909 205 EKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSEACDSKLSEVEKDIAGLNMYD 282 (497)
Q Consensus 205 ~~~~inLkGi~iGng~~dp~~q~~~~~~f~~~~gli~~~~~~~~~~~c~~~~~~--~~~~~C~~~~~~~~~~~~~in~y~ 282 (497)
..++||||||+|||||++|..|..++.+|+|.+|+|++++++.+.+.|...... +....|.+++..+..+.+.+|.|+
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 159 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHH 159 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhh
Confidence 556899999999999999999999999999999999999999999999764432 345689999998888888999999
Q ss_pred cccc-ccCCCchhHHHhhhccCCccccccCCCCCCchhhhhccccCCCCCCCCCCCCCCCccccccCCCCCCCC--hhhH
Q 010909 283 ILEP-CYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTD--DRVA 359 (497)
Q Consensus 283 i~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~--~~~~ 359 (497)
++.+ |... +.+ ...|++ ...+
T Consensus 160 ~~~~~~~~~---------------------------~~~-----------------------------~~~c~~~~~~~~ 183 (319)
T PLN02213 160 ILTPDCDVT---------------------------NVT-----------------------------SPDCYYYPYHLI 183 (319)
T ss_pred cccCcccCc---------------------------cCC-----------------------------CCCcccchhHHH
Confidence 8855 5221 000 023543 3457
Q ss_pred hhccCcHHHHHhhCCCCCccccccccccccccccccCcchHHHHHHHhhcCceEEEEecCCccccCchhHHHHHhhcCCC
Q 010909 360 TLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYK 439 (497)
Q Consensus 360 ~~ylN~~~Vr~aL~v~~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~Ll~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~ 439 (497)
..|||+++||+||||+.... .+|+.|+..+.+..|..++++.+.+++.+++|||||+||.|++||++|+++|+++|+|+
T Consensus 184 ~~ylN~~~V~~aL~v~~~~~-~~w~~c~~~v~~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~ 262 (319)
T PLN02213 184 ECWANDESVREALHIEKGSK-GKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYS 262 (319)
T ss_pred HHHhCCHHHHHHhCcCCCCC-CCCccCCcccccccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCC
Confidence 89999999999999985321 47999999887777777777776667778999999999999999999999999999999
Q ss_pred CCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHHHHHcCCCC
Q 010909 440 IVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 497 (497)
Q Consensus 440 ~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~~fl~g~~~ 497 (497)
+.++|++|+++++++||+|+|+++|||++|++|||||| |||++|++||++||.++++
T Consensus 263 ~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 263 PIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred CCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999986699999999999998 7999999999999999875
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-66 Score=527.16 Aligned_cols=380 Identities=28% Similarity=0.501 Sum_probs=293.0
Q ss_pred CCCceEEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCc
Q 010909 43 LPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSW 122 (497)
Q Consensus 43 ~~~~~~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW 122 (497)
+|.++|+||.+.. ..+|||+|+++++|.++|+||||||||||||+.|+|+|+||++|+.+. + +.--.||+||
T Consensus 72 lpv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~---~-P~~~~NP~SW 143 (498)
T COG2939 72 LPVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGT---S-PSYPDNPGSW 143 (498)
T ss_pred cchhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCC---C-CCCCCCcccc
Confidence 3444555552222 238899999999999999999999999999999999999999999752 1 2112799999
Q ss_pred ccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCC--CEEEEeeccccccHHHHHHHHHhc
Q 010909 123 TKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLAN--PFFIAGESYAGIYVPTLAYEVMKG 200 (497)
Q Consensus 123 ~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~--~~yi~GESYgG~yvP~la~~i~~~ 200 (497)
+.++||||||||||||||++ .......+-..+.+|++.|++.|++.||++.+. |+||+||||||+|+|.||.+|+++
T Consensus 144 ~~~adLvFiDqPvGTGfS~a-~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~ 222 (498)
T COG2939 144 LDFADLVFIDQPVGTGFSRA-LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLED 222 (498)
T ss_pred ccCCceEEEecCcccCcccc-cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHh
Confidence 99999999999999999997 333445677788999999999999999999887 999999999999999999999998
Q ss_pred ccCCCCCeeeeeeeeccCC-CCCccccccCchhhhccC----CCCCHHHHHHHHHHcccCCCC---------CCChHHHH
Q 010909 201 IDAGEKPVLNFKGYLVGNG-VTDEEIDGNALVPFVHGM----GLISDDLYEEVQNLCQGNFYN---------PLSEACDS 266 (497)
Q Consensus 201 ~~~~~~~~inLkGi~iGng-~~dp~~q~~~~~~f~~~~----gli~~~~~~~~~~~c~~~~~~---------~~~~~C~~ 266 (497)
+.. .+..+||++++|||| +|||..|...|.+++... +..+.+..+++.+.|.+++.. ..-..|..
T Consensus 223 ~~~-~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~ 301 (498)
T COG2939 223 NIA-LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCEN 301 (498)
T ss_pred ccc-cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHH
Confidence 632 233699999999999 999999999999998744 455566777788877654321 11234655
Q ss_pred HHHHHHHHh---------cCCCCccccccccCCCchhHHHhhhccCCccccccCCCCCCchhhhhccccCCCCCCCCCCC
Q 010909 267 KLSEVEKDI---------AGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDG 337 (497)
Q Consensus 267 ~~~~~~~~~---------~~in~y~i~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (497)
+...+.... +..|.|++.+.|.... +
T Consensus 302 ~~~~~~~~~~~~~~r~~~~~~n~y~~r~~~~d~g------------------------------------------~--- 336 (498)
T COG2939 302 ASAYLTGLMREYVGRAGGRLLNVYDIREECRDPG------------------------------------------L--- 336 (498)
T ss_pred HHHHHHhcchhhhccccccccccccchhhcCCCC------------------------------------------c---
Confidence 555443321 1234455544443210 0
Q ss_pred CCCCccccccCCCCCCCC-hhhHhhccCcHHHHHhhCCCCCccccccccccccc--cc---cccCc-chHHHHHHHhhcC
Q 010909 338 IVPSWPQLLNSNSVPCTD-DRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LF---EHDAG-SMIKYHKNLTLRG 410 (497)
Q Consensus 338 ~~~~~~~~~~~~~~~c~~-~~~~~~ylN~~~Vr~aL~v~~~~~~~~w~~c~~~v--~~---~~d~~-~~~~~~~~Ll~~~ 410 (497)
.-.|++ .....+|++...++++++... ..|..|+..+ .| ..+.. .....+..++.++
T Consensus 337 ------------~~~~y~~~~~~ld~~~~~~~~~~~~~~~----d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~ 400 (498)
T COG2939 337 ------------GGSCYDTLSTSLDYFNFDPEQEVNDPEV----DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNN 400 (498)
T ss_pred ------------ccccccceeeccccccccchhccccccc----cchhccchHHHHhhhhhcCCcccccHHHHhhhhhcC
Confidence 022443 234567888888899888765 4799999875 44 34433 3345567788899
Q ss_pred ceEEEEecCCccccCchhHHHHHhhcCCCCCccc-----eeeEe--CCeeceEEEEecCceEEEEEcCceecCCCCCcHH
Q 010909 411 YRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKW-----RPWTS--NGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPRE 483 (497)
Q Consensus 411 irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~-----~~w~~--~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~ 483 (497)
+.+++|.||.|.+||+.|+++|..+|+|-+...| ++|.. ..+..|-++++. +++|+.++.||||||.|+|+.
T Consensus 401 ~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~-n~~~~r~y~aGHMvp~d~P~~ 479 (498)
T COG2939 401 VWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYR-NLTFLRIYEAGHMVPYDRPES 479 (498)
T ss_pred CceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccccC-CceEEEEecCcceeecCChHH
Confidence 9999999999999999999999999999987765 24543 566777777787 599999999999999999999
Q ss_pred HHHHHHHHHcC
Q 010909 484 ALDFYSRFLAG 494 (497)
Q Consensus 484 a~~m~~~fl~g 494 (497)
+++|++.|+++
T Consensus 480 ~~~~~~~~~~~ 490 (498)
T COG2939 480 SLEMVNLWING 490 (498)
T ss_pred HHHHHHHHHhh
Confidence 99999999987
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.5e-65 Score=487.56 Aligned_cols=392 Identities=25% Similarity=0.431 Sum_probs=306.3
Q ss_pred eEEEEEEecCCCCeeEEEEEEecCCC-CCCCCEEEEeCCCCchhhH-hhHhhhcCCeeeeCCCCCCCCCcccccCCCccc
Q 010909 47 HYSGYVTVDESHGRNLFYYFVESEGN-PSKDPVVLWLNGGPGCSSF-DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (497)
Q Consensus 47 ~~sGy~~v~~~~~~~lfy~f~~s~~~-~~~~PlvlWlnGGPG~SS~-~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (497)
.-+||++++. ++|+|||++.+..+ ...+|+.|||+||||.||. +|+|.|+||+..+ +.+|+.+|.+
T Consensus 3 ~~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~----------~~~r~~TWlk 70 (414)
T KOG1283|consen 3 EDWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD----------GSPRDWTWLK 70 (414)
T ss_pred ccccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC----------CCcCCchhhh
Confidence 3589999986 89999999887643 4789999999999999985 8999999999876 5789999999
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
.|||||||+|||+||||.+..+.|..+++++|.|+.+.|+.||..||+|+..||||+-|||||++.+.+|..|.+..+.+
T Consensus 71 ~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G 150 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG 150 (414)
T ss_pred hccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887665
Q ss_pred CCCeeeeeeeeccCCCCCccccccCchhhhccCCCCCHHHHHHHHHH---cccCCCC---CCChHHH-HHHHHHHHHhcC
Q 010909 205 EKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNL---CQGNFYN---PLSEACD-SKLSEVEKDIAG 277 (497)
Q Consensus 205 ~~~~inLkGi~iGng~~dp~~q~~~~~~f~~~~gli~~~~~~~~~~~---c~~~~~~---~~~~~C~-~~~~~~~~~~~~ 277 (497)
+.+.|+.|+++|++||+|..-..+..||++.++++|+...++..+. |.....+ ...+.|- ..-.-+.+...+
T Consensus 151 -~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~ 229 (414)
T KOG1283|consen 151 -EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNG 229 (414)
T ss_pred -ceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccC
Confidence 3579999999999999999888999999999999999887665543 3321111 0111122 222234455678
Q ss_pred CCCccccccccCCCchhHHHhhhccCCccccccCCCCCCchhhhhccccCCCCCCCCCCCCCCCccccccCCCCCCCChh
Q 010909 278 LNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTDDR 357 (497)
Q Consensus 278 in~y~i~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 357 (497)
+|.|||+.+..... |+. ... ....+-.+..+.+. +.. .-.+.+
T Consensus 230 VdfYNil~~t~~d~--~~~-----------ss~-~~~~~~~~~rrl~~-----~~~------------------~~~~~D 272 (414)
T KOG1283|consen 230 VDFYNILTKTLGDQ--YSL-----------SSR-AAMTPEEVMRRLLV-----RFV------------------GDEDRD 272 (414)
T ss_pred cceeeeeccCCCcc--hhh-----------hhh-hhcchHHHHHHHHh-----ccC------------------cchhHH
Confidence 89999987643220 111 000 00000000000000 000 001123
Q ss_pred hHhhccCcHHHHHhhCCCCCccccccccccccc--cccccC-cchHHHHHHHhhcCceEEEEecCCccccCchhHHHHHh
Q 010909 358 VATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDA-GSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTR 434 (497)
Q Consensus 358 ~~~~ylN~~~Vr~aL~v~~~~~~~~w~~c~~~v--~~~~d~-~~~~~~~~~Ll~~~irVLiy~Gd~D~i~n~~G~~~~i~ 434 (497)
.+++++|- -||++|++.++- ..|-..+..+ .++.|. .+.+..+.+||.+|++|.||+|++|.||++.|+++|++
T Consensus 273 ~L~~lM~g-~vrkkLgIip~~--~~wGgqsg~vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~ 349 (414)
T KOG1283|consen 273 KLSDLMNG-PVRKKLGIIPGG--VKWGGQSGDVFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVE 349 (414)
T ss_pred HHHHHhcc-cccccccccCCC--CcccCcCCchHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhh
Confidence 45666665 599999998765 4788777665 455554 46678889999999999999999999999999999999
Q ss_pred hcCCCCCccce--eeE---eCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHHHHH
Q 010909 435 SVGYKIVDKWR--PWT---SNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFL 492 (497)
Q Consensus 435 ~L~w~~~~~~~--~w~---~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~~fl 492 (497)
+|.|+....|+ +|+ ++-..+||.|+|.| |.|.+|..||||||.|+|+.|.+|++.+.
T Consensus 350 ~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktykn-l~f~wilraghmvp~Dnp~~a~hmlr~vt 411 (414)
T KOG1283|consen 350 KLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKN-LSFFWILRAGHMVPADNPAAASHMLRHVT 411 (414)
T ss_pred heecCCCCccccceeeeccceeecchhhhhhcc-ceeEEeecccCcccCCCHHHHhhheeecc
Confidence 99999988764 454 35578999999986 99999999999999999999999998765
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.02 E-value=3.4e-08 Score=96.46 Aligned_cols=129 Identities=22% Similarity=0.303 Sum_probs=76.1
Q ss_pred EEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHh-hHhhhcCCeeeeCCCCCCCCCcccccCCCccccc
Q 010909 48 YSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS 126 (497)
Q Consensus 48 ~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~-g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 126 (497)
..+++.++ +..+.|.-+. .+...|.||++.||||+++.. ..+.+ .+.. +-.
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~----------------~l~~------~g~ 54 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLRE----------------LLKE------EGR 54 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHH----------------HHHh------cCC
Confidence 35566654 3344443332 223357889999999998643 22211 1111 136
Q ss_pred ceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCC
Q 010909 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (497)
Q Consensus 127 nllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 206 (497)
+++-+|.| |.|.|..........+-++.++++.+++.. +...+++|+|+|+||..+..+|.. .
T Consensus 55 ~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~----~----- 117 (288)
T TIGR01250 55 EVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALK----Y----- 117 (288)
T ss_pred EEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHh----C-----
Confidence 89999999 999986432211012344555655554432 233569999999999665555542 2
Q ss_pred CeeeeeeeeccCCCCC
Q 010909 207 PVLNFKGYLVGNGVTD 222 (497)
Q Consensus 207 ~~inLkGi~iGng~~d 222 (497)
+-.++++++.++...
T Consensus 118 -p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 118 -GQHLKGLIISSMLDS 132 (288)
T ss_pred -ccccceeeEeccccc
Confidence 245788888887653
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.94 E-value=1.9e-07 Score=93.87 Aligned_cols=141 Identities=21% Similarity=0.249 Sum_probs=84.1
Q ss_pred CCCccccCCCCCCCCCCceEEEEEEecCCCC--eeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCC
Q 010909 29 ETALIAQIPGFSGNLPSKHYSGYVTVDESHG--RNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAP 106 (497)
Q Consensus 29 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~--~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~ 106 (497)
.+.++.+||.+. + .-.|+.+....| ..++|.- ..++ +.|.||.+.|.|+.++.+..+. |
T Consensus 7 ~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~w~~~~---~------ 67 (302)
T PRK00870 7 PDSRFENLPDYP----F--APHYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYLYRKMI---P------ 67 (302)
T ss_pred CcccccCCcCCC----C--CceeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhhHHHHH---H------
Confidence 346677888652 2 345688864223 3566543 2333 4678999999987776653322 1
Q ss_pred CCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccc
Q 010909 107 TTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYA 186 (497)
Q Consensus 107 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYg 186 (497)
.|.. +-.+++.+|.| |.|.|-.... ....+.++.++++.++|.+ +...++.|.|+|+|
T Consensus 68 -------~L~~------~gy~vi~~Dl~-G~G~S~~~~~-~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~G 125 (302)
T PRK00870 68 -------ILAA------AGHRVIAPDLI-GFGRSDKPTR-REDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWG 125 (302)
T ss_pred -------HHHh------CCCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChH
Confidence 1111 23589999999 9999843211 1112344556666555543 23458999999999
Q ss_pred cccHHHHHHHHHhcccCCCCCeeeeeeeeccCCC
Q 010909 187 GIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (497)
Q Consensus 187 G~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~ 220 (497)
|..+-.+| ... +-.++++++.++.
T Consensus 126 g~ia~~~a----~~~------p~~v~~lvl~~~~ 149 (302)
T PRK00870 126 GLIGLRLA----AEH------PDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHH----HhC------hhheeEEEEeCCC
Confidence 95544444 322 1258888877764
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.88 E-value=1.4e-07 Score=94.30 Aligned_cols=122 Identities=17% Similarity=0.143 Sum_probs=79.0
Q ss_pred EEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEe
Q 010909 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (497)
Q Consensus 51 y~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (497)
|+++. +.+++|.-. .+ ..|.||.|.|.++.|.++-.+.+ .| .+..+++.
T Consensus 12 ~~~~~---~~~i~y~~~---G~--~~~~vlllHG~~~~~~~w~~~~~----------------~L-------~~~~~vi~ 60 (294)
T PLN02824 12 TWRWK---GYNIRYQRA---GT--SGPALVLVHGFGGNADHWRKNTP----------------VL-------AKSHRVYA 60 (294)
T ss_pred eEEEc---CeEEEEEEc---CC--CCCeEEEECCCCCChhHHHHHHH----------------HH-------HhCCeEEE
Confidence 66664 566665332 21 23789999999998887644331 12 23358999
Q ss_pred ecCCCccccccccCCCC----cccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCC
Q 010909 131 LDSPAGVGLSYSENKTD----YVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (497)
Q Consensus 131 iDqPvGtGfS~~~~~~~----~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 206 (497)
+|.| |.|.|...+... ...+.++.|+++.++|.+. ...+++|+|+|.|| .+|..+....
T Consensus 61 ~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg----~va~~~a~~~----- 123 (294)
T PLN02824 61 IDLL-GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGG----VVGLQAAVDA----- 123 (294)
T ss_pred EcCC-CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHH----HHHHHHHHhC-----
Confidence 9999 999997543221 1234556677777777643 23689999999999 4454444322
Q ss_pred CeeeeeeeeccCCCC
Q 010909 207 PVLNFKGYLVGNGVT 221 (497)
Q Consensus 207 ~~inLkGi~iGng~~ 221 (497)
+-.++++++.|+..
T Consensus 124 -p~~v~~lili~~~~ 137 (294)
T PLN02824 124 -PELVRGVMLINISL 137 (294)
T ss_pred -hhheeEEEEECCCc
Confidence 23589999988764
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.86 E-value=1.6e-07 Score=93.88 Aligned_cols=58 Identities=12% Similarity=0.120 Sum_probs=47.4
Q ss_pred CceEEEEecCCccccCchhHHH-HHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEA-WTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~-~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
.++|||..|+.|.+++.....+ +.+. ..+ .++..|.+|||+++.++|+...+++
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~------------------------ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i 281 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRAT------------------------FPD-HVLVELPNAKHFIQEDAPDRIAAAI 281 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHh------------------------cCC-CeEEEcCCCcccccccCHHHHHHHH
Confidence 6999999999999886554333 2233 233 7889999999999999999999999
Q ss_pred HHHH
Q 010909 489 SRFL 492 (497)
Q Consensus 489 ~~fl 492 (497)
.+|+
T Consensus 282 ~~~~ 285 (286)
T PRK03204 282 IERF 285 (286)
T ss_pred HHhc
Confidence 9997
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=98.85 E-value=2.7e-07 Score=91.13 Aligned_cols=124 Identities=12% Similarity=0.085 Sum_probs=79.1
Q ss_pred CCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCccc-ccceEeecCCCc
Q 010909 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK-VSSIIYLDSPAG 136 (497)
Q Consensus 58 ~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiDqPvG 136 (497)
.|..|+|.+++.. +..+|+||.+.|..++|..+-.+. + . +.+ -..++-+|.| |
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~---~-------------~-------l~~~g~~via~D~~-G 62 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELA---E-------------N-------ISSLGILVFSHDHI-G 62 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHH---H-------------H-------HHhCCCEEEEccCC-C
Confidence 4778999877765 244699999999977665542221 1 1 122 2478999988 9
Q ss_pred cccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeec
Q 010909 137 VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLV 216 (497)
Q Consensus 137 tGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~i 216 (497)
.|.|-.... ...+-....+|+.+++..+.+.+ ...+++|+|+|.||. +|..+.... +-+++|+++
T Consensus 63 ~G~S~~~~~--~~~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~----ia~~~a~~~------p~~i~~lil 127 (276)
T PHA02857 63 HGRSNGEKM--MIDDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGAT----ISILAAYKN------PNLFTAMIL 127 (276)
T ss_pred CCCCCCccC--CcCCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHH----HHHHHHHhC------ccccceEEE
Confidence 999854211 11222344566777776554444 346899999999995 444433322 225899999
Q ss_pred cCCCCC
Q 010909 217 GNGVTD 222 (497)
Q Consensus 217 Gng~~d 222 (497)
.+|.++
T Consensus 128 ~~p~~~ 133 (276)
T PHA02857 128 MSPLVN 133 (276)
T ss_pred eccccc
Confidence 998765
No 14
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.82 E-value=6.2e-07 Score=91.31 Aligned_cols=137 Identities=18% Similarity=0.168 Sum_probs=82.7
Q ss_pred EEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCccc-cc
Q 010909 48 YSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK-VS 126 (497)
Q Consensus 48 ~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~-~a 126 (497)
..+++... .|..++|+.+........+|+||++.|..+.++-. +.+ + ...+++ -.
T Consensus 33 ~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~--~~~-----------------~---~~~L~~~Gy 88 (330)
T PLN02298 33 SKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWT--FQS-----------------T---AIFLAQMGF 88 (330)
T ss_pred ccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCccee--hhH-----------------H---HHHHHhCCC
Confidence 46666664 37788885543322224578999999994332210 000 0 001222 36
Q ss_pred ceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCC
Q 010909 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (497)
Q Consensus 127 nllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 206 (497)
+++-+|.| |.|.|-.. .....+-+..++|+.++++..... .++...+++|+|+|.||..+ ..+....
T Consensus 89 ~V~~~D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia----~~~a~~~----- 155 (330)
T PLN02298 89 ACFALDLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAIC----LLIHLAN----- 155 (330)
T ss_pred EEEEecCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHH----HHHHhcC-----
Confidence 99999999 99998532 222234456688888888754432 22334589999999999544 3333222
Q ss_pred CeeeeeeeeccCCCCC
Q 010909 207 PVLNFKGYLVGNGVTD 222 (497)
Q Consensus 207 ~~inLkGi~iGng~~d 222 (497)
+-.++|+++.+++.+
T Consensus 156 -p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 156 -PEGFDGAVLVAPMCK 170 (330)
T ss_pred -cccceeEEEeccccc
Confidence 125899999988764
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.79 E-value=7.7e-07 Score=87.22 Aligned_cols=59 Identities=20% Similarity=0.262 Sum_probs=49.6
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
.++||+.+|+.|.+++....+.+.+.+. + ..++.+.++||+++.++|+...+.+.
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~e~p~~~~~~i~ 274 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRVP------------------------T-ATLHVVPGGGHLVHEEQADGVVGLIL 274 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhcc------------------------C-CeEEEECCCCCcccccCHHHHHHHHH
Confidence 6899999999999999876666655431 2 45677899999999999999999999
Q ss_pred HHHc
Q 010909 490 RFLA 493 (497)
Q Consensus 490 ~fl~ 493 (497)
+|+.
T Consensus 275 ~f~~ 278 (278)
T TIGR03056 275 QAAE 278 (278)
T ss_pred HHhC
Confidence 9984
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.78 E-value=6.5e-07 Score=92.08 Aligned_cols=129 Identities=21% Similarity=0.241 Sum_probs=78.9
Q ss_pred CCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCcc
Q 010909 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (497)
Q Consensus 58 ~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 137 (497)
.|..+|+..+...+ .+.+|+||.+.|..+.++.. +.+..+ .|.. +-.+++-+|.| |.
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~--~~~~~~-------------~l~~------~g~~v~~~D~~-G~ 126 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFF--FEGIAR-------------KIAS------SGYGVFAMDYP-GF 126 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchH--HHHHHH-------------HHHh------CCCEEEEecCC-CC
Confidence 46788876554322 24569999999986554431 111111 0110 12589999999 99
Q ss_pred ccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeecc
Q 010909 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (497)
Q Consensus 138 GfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iG 217 (497)
|.|-.. .++..+-++.++|+.++++.. ...+++...+++|+|+|+|| .+|..+.... +-.++|+++.
T Consensus 127 G~S~~~--~~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG----~val~~a~~~------p~~v~glVLi 193 (349)
T PLN02385 127 GLSEGL--HGYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGG----AVALKVHLKQ------PNAWDGAILV 193 (349)
T ss_pred CCCCCC--CCCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccch----HHHHHHHHhC------cchhhheeEe
Confidence 998542 222234456677887777653 33334555689999999999 4455444332 2357999998
Q ss_pred CCCCC
Q 010909 218 NGVTD 222 (497)
Q Consensus 218 ng~~d 222 (497)
+|...
T Consensus 194 ~p~~~ 198 (349)
T PLN02385 194 APMCK 198 (349)
T ss_pred ccccc
Confidence 87653
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.75 E-value=1.1e-07 Score=91.35 Aligned_cols=59 Identities=22% Similarity=0.268 Sum_probs=49.9
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
.++|++.+|+.|.+|+....+.+.+.+ .+ ..++.+.++||+.+.++|+...+.+.
T Consensus 198 ~~P~l~i~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 252 (257)
T TIGR03611 198 QHPVLLIANRDDMLVPYTQSLRLAAAL------------------------PN-AQLKLLPYGGHASNVTDPETFNRALL 252 (257)
T ss_pred CccEEEEecCcCcccCHHHHHHHHHhc------------------------CC-ceEEEECCCCCCccccCHHHHHHHHH
Confidence 689999999999999987776655543 12 56778899999999999999999999
Q ss_pred HHHc
Q 010909 490 RFLA 493 (497)
Q Consensus 490 ~fl~ 493 (497)
+||.
T Consensus 253 ~fl~ 256 (257)
T TIGR03611 253 DFLK 256 (257)
T ss_pred HHhc
Confidence 9984
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.74 E-value=2.7e-07 Score=89.65 Aligned_cols=104 Identities=19% Similarity=0.109 Sum_probs=71.2
Q ss_pred CCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCccc
Q 010909 71 GNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVT 150 (497)
Q Consensus 71 ~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~ 150 (497)
+++.+.|.||++.|.+|.+.....+.+ .| .+..+++.+|.| |.|.|.... . .
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~D~~-G~G~s~~~~--~--~ 62 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNLGVLAR----------------DL-------VNDHDIIQVDMR-NHGLSPRDP--V--M 62 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHHHHHHH----------------HH-------hhCCeEEEECCC-CCCCCCCCC--C--C
Confidence 556678999999999888766533321 11 234699999999 999885422 2 3
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCC
Q 010909 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng 219 (497)
+-.+.++|+.++|..+ ...+++|.|+|.||..+..+|.+ . +-.++++++.++
T Consensus 63 ~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~----~------~~~v~~lvli~~ 114 (255)
T PRK10673 63 NYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTAL----A------PDRIDKLVAIDI 114 (255)
T ss_pred CHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHh----C------HhhcceEEEEec
Confidence 4556788888888652 33579999999999666555543 2 234788887753
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.73 E-value=2.3e-06 Score=84.42 Aligned_cols=61 Identities=15% Similarity=0.114 Sum_probs=50.8
Q ss_pred hcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHH
Q 010909 408 LRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDF 487 (497)
Q Consensus 408 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m 487 (497)
+-.++||+..|..|.+++..-.+.+.+.+ .+ ..++.|.+|||+++.++|+...++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~------------------------~~-~~~~~i~~agH~~~~e~p~~~~~~ 275 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNM------------------------PD-AQLHVFSRCGHWAQWEHADAFNRL 275 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhC------------------------CC-CEEEEeCCCCcCCcccCHHHHHHH
Confidence 34689999999999999976565554443 23 778889999999999999999999
Q ss_pred HHHHHc
Q 010909 488 YSRFLA 493 (497)
Q Consensus 488 ~~~fl~ 493 (497)
+.+|+.
T Consensus 276 i~~fl~ 281 (282)
T TIGR03343 276 VIDFLR 281 (282)
T ss_pred HHHHhh
Confidence 999985
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.67 E-value=1.3e-06 Score=83.15 Aligned_cols=60 Identities=25% Similarity=0.268 Sum_probs=49.8
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
-.++|++.+|+.|.+++....+.+.+.+ .+ .+++.+.++||+++.++|+...+.+
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLV------------------------PG-ARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhC------------------------CC-ceEEEECCCCCcccccChHHHHHHH
Confidence 3689999999999999987665554442 23 5778899999999999999999999
Q ss_pred HHHHc
Q 010909 489 SRFLA 493 (497)
Q Consensus 489 ~~fl~ 493 (497)
+.|+.
T Consensus 247 ~~fl~ 251 (251)
T TIGR02427 247 RDFLR 251 (251)
T ss_pred HHHhC
Confidence 99973
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.65 E-value=2.2e-06 Score=88.61 Aligned_cols=65 Identities=23% Similarity=0.387 Sum_probs=51.1
Q ss_pred CceEEEEecCCccccCchhH-HHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGS-EAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~-~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
.++|||..|+.|.+++..+. ..+++.|. +...+ .++++|.+|||+++.++|++..+.+
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~--------------------~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I 350 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLP--------------------SQLPN-VTLYVLEGVGHCPHDDRPDLVHEKL 350 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhh--------------------ccCCc-eEEEEcCCCCCCccccCHHHHHHHH
Confidence 69999999999999997653 23444431 11233 7888999999999999999999999
Q ss_pred HHHHcCC
Q 010909 489 SRFLAGK 495 (497)
Q Consensus 489 ~~fl~g~ 495 (497)
.+|+...
T Consensus 351 ~~FL~~~ 357 (360)
T PLN02679 351 LPWLAQL 357 (360)
T ss_pred HHHHHhc
Confidence 9999753
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.62 E-value=2.9e-06 Score=84.83 Aligned_cols=115 Identities=15% Similarity=0.164 Sum_probs=74.1
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccc
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtG 138 (497)
+..++|.-. . +.|.||.+.|.|+.+..+-.+. ..| .+...++-+|.| |.|
T Consensus 16 g~~i~y~~~--G----~g~~vvllHG~~~~~~~w~~~~----------------~~L-------~~~~~via~D~~-G~G 65 (295)
T PRK03592 16 GSRMAYIET--G----EGDPIVFLHGNPTSSYLWRNII----------------PHL-------AGLGRCLAPDLI-GMG 65 (295)
T ss_pred CEEEEEEEe--C----CCCEEEEECCCCCCHHHHHHHH----------------HHH-------hhCCEEEEEcCC-CCC
Confidence 566666432 1 2478999999998887653322 112 223489999999 999
Q ss_pred cccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccC
Q 010909 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (497)
Q Consensus 139 fS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGn 218 (497)
.|..... . .+-...++++.++|+. +...+++|.|+|.||..+- .+.... +-.++++++.|
T Consensus 66 ~S~~~~~-~--~~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~----~~a~~~------p~~v~~lil~~ 125 (295)
T PRK03592 66 ASDKPDI-D--YTFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGF----DWAARH------PDRVRGIAFME 125 (295)
T ss_pred CCCCCCC-C--CCHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHH----HHHHhC------hhheeEEEEEC
Confidence 9954321 2 3445566777666654 2336899999999995444 443332 23589999999
Q ss_pred CCCCc
Q 010909 219 GVTDE 223 (497)
Q Consensus 219 g~~dp 223 (497)
+...+
T Consensus 126 ~~~~~ 130 (295)
T PRK03592 126 AIVRP 130 (295)
T ss_pred CCCCC
Confidence 86544
No 23
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.55 E-value=2.1e-07 Score=86.92 Aligned_cols=104 Identities=22% Similarity=0.153 Sum_probs=67.3
Q ss_pred EEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHHH
Q 010909 79 VLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASD 158 (497)
Q Consensus 79 vlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d 158 (497)
||.+.|.++.+..+..+.+ .|. +-.+++.+|.| |.|.|-.... ....+-++.+++
T Consensus 1 vv~~hG~~~~~~~~~~~~~----------------~l~-------~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~ 55 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE----------------ALA-------RGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAED 55 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH----------------HHH-------TTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHH----------------HHh-------CCCEEEEEecC-Cccccccccc-cCCcchhhhhhh
Confidence 6899999888865533321 121 34589999999 9999865432 112344455666
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 159 ~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
+.++|++ . ...+++|+|+|+||..+-.++ ... +-.++|+++.++.....
T Consensus 56 l~~~l~~----~---~~~~~~lvG~S~Gg~~a~~~a----~~~------p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 56 LAELLDA----L---GIKKVILVGHSMGGMIALRLA----ARY------PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHHH----T---TTSSEEEEEETHHHHHHHHHH----HHS------GGGEEEEEEESESSSHH
T ss_pred hhhcccc----c---ccccccccccccccccccccc----ccc------ccccccceeeccccccc
Confidence 6665543 3 226899999999995554444 332 22799999999888654
No 24
>PLN02578 hydrolase
Probab=98.53 E-value=3.8e-06 Score=86.61 Aligned_cols=60 Identities=20% Similarity=0.217 Sum_probs=48.0
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
-.++||+.+|+.|.+|+....+++.+.+ .+ -.++.+ ++||+.+.++|++..+.+
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~------------------------p~-a~l~~i-~~GH~~~~e~p~~~~~~I 348 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFY------------------------PD-TTLVNL-QAGHCPHDEVPEQVNKAL 348 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC------------------------CC-CEEEEe-CCCCCccccCHHHHHHHH
Confidence 3699999999999998877665544432 23 456667 799999999999999999
Q ss_pred HHHHcC
Q 010909 489 SRFLAG 494 (497)
Q Consensus 489 ~~fl~g 494 (497)
.+|+.+
T Consensus 349 ~~fl~~ 354 (354)
T PLN02578 349 LEWLSS 354 (354)
T ss_pred HHHHhC
Confidence 999853
No 25
>PRK06489 hypothetical protein; Provisional
Probab=98.51 E-value=2.6e-05 Score=80.63 Aligned_cols=60 Identities=20% Similarity=0.186 Sum_probs=46.9
Q ss_pred CceEEEEecCCccccCchhH--HHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCc----eecCCCCCcHH
Q 010909 410 GYRALIFSGDHDMCVPFTGS--EAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGA----GHTVPEYKPRE 483 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~--~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~A----GHmVP~DqP~~ 483 (497)
..+|||..|+.|.+++.... ++..+.+ .+ -.+++|.+| ||++. ++|+.
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~i------------------------p~-a~l~~i~~a~~~~GH~~~-e~P~~ 345 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRV------------------------KH-GRLVLIPASPETRGHGTT-GSAKF 345 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhC------------------------cC-CeEEEECCCCCCCCcccc-cCHHH
Confidence 69999999999999987644 3332322 22 578889986 99985 89999
Q ss_pred HHHHHHHHHcCC
Q 010909 484 ALDFYSRFLAGK 495 (497)
Q Consensus 484 a~~m~~~fl~g~ 495 (497)
....+.+|+...
T Consensus 346 ~~~~i~~FL~~~ 357 (360)
T PRK06489 346 WKAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHHhc
Confidence 999999999754
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.48 E-value=5.8e-06 Score=86.12 Aligned_cols=130 Identities=15% Similarity=0.052 Sum_probs=79.8
Q ss_pred CceEEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCccc
Q 010909 45 SKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (497)
Q Consensus 45 ~~~~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (497)
.++-+|+.... .+..+||.- .. +...|.||.+.|.|+.+..+-.+.+ .| .+
T Consensus 102 ~~~~~~~~~~~--~~~~~~y~~--~G--~~~~~~ivllHG~~~~~~~w~~~~~----------------~L-------~~ 152 (383)
T PLN03084 102 LKMGAQSQASS--DLFRWFCVE--SG--SNNNPPVLLIHGFPSQAYSYRKVLP----------------VL-------SK 152 (383)
T ss_pred ccccceeEEcC--CceEEEEEe--cC--CCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------hc
Confidence 34555665532 355565443 22 2346899999999887765432221 12 22
Q ss_pred ccceEeecCCCccccccccCCC-CcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKT-DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 203 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~-~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~ 203 (497)
..+++-+|.| |.|+|...... ....+-++.++++.++|++. ...+++|+|+|+|| .+|..+....
T Consensus 153 ~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG----~ia~~~a~~~-- 218 (383)
T PLN03084 153 NYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFS----PPVVKYASAH-- 218 (383)
T ss_pred CCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHH----HHHHHHHHhC--
Confidence 3689999999 99999643221 11234455666666666542 33579999999999 4455554432
Q ss_pred CCCCeeeeeeeeccCCCC
Q 010909 204 GEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 204 ~~~~~inLkGi~iGng~~ 221 (497)
+-.++++++.|+..
T Consensus 219 ----P~~v~~lILi~~~~ 232 (383)
T PLN03084 219 ----PDKIKKLILLNPPL 232 (383)
T ss_pred ----hHhhcEEEEECCCC
Confidence 23589999998764
No 27
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.44 E-value=1.1e-05 Score=79.89 Aligned_cols=117 Identities=18% Similarity=0.078 Sum_probs=73.3
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccc
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtG 138 (497)
+..+.|+..+.. ...|.||+++|-++.+..+..+.+ .| .+..+++-+|.| |.|
T Consensus 11 ~~~~~~~~~~~~---~~~~plvllHG~~~~~~~w~~~~~----------------~L-------~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 11 GQSIRTAVRPGK---EGLTPLLIFNGIGANLELVFPFIE----------------AL-------DPDLEVIAFDVP-GVG 63 (276)
T ss_pred CcEEEEEEecCC---CCCCcEEEEeCCCcchHHHHHHHH----------------Hh-------ccCceEEEECCC-CCC
Confidence 566878775321 234678999987666555422211 11 234699999999 999
Q ss_pred cccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccC
Q 010909 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (497)
Q Consensus 139 fS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGn 218 (497)
.|-... . ..+-+..++++.++|... .-.+++|+|+|+|| .+|.++.... .-.++++++.|
T Consensus 64 ~S~~~~-~--~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG----~va~~~a~~~------p~~v~~lvl~~ 123 (276)
T TIGR02240 64 GSSTPR-H--PYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGG----ALAQQFAHDY------PERCKKLILAA 123 (276)
T ss_pred CCCCCC-C--cCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHH----HHHHHHHHHC------HHHhhheEEec
Confidence 995321 1 123445566666665542 23579999999999 4555555433 23589999998
Q ss_pred CCCC
Q 010909 219 GVTD 222 (497)
Q Consensus 219 g~~d 222 (497)
+...
T Consensus 124 ~~~~ 127 (276)
T TIGR02240 124 TAAG 127 (276)
T ss_pred cCCc
Confidence 8764
No 28
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.42 E-value=4.1e-05 Score=80.13 Aligned_cols=128 Identities=19% Similarity=0.112 Sum_probs=81.1
Q ss_pred CCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCcc
Q 010909 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (497)
Q Consensus 58 ~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 137 (497)
.+..+|++.+.... .+.+|+||++.|.++.+..+-.+. + .+. .+-.+++-+|.| |.
T Consensus 119 ~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~~~a---~-------------~L~------~~Gy~V~~~D~r-Gh 174 (395)
T PLN02652 119 RRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFA---K-------------QLT------SCGFGVYAMDWI-GH 174 (395)
T ss_pred CCCEEEEEEecCCC-CCCceEEEEECCchHHHHHHHHHH---H-------------HHH------HCCCEEEEeCCC-CC
Confidence 35677777665532 334789999999977655432211 1 111 112489999999 99
Q ss_pred ccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeecc
Q 010909 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (497)
Q Consensus 138 GfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iG 217 (497)
|.|-.. ..+..+.+..++|+.++++..-..+|. .+++|+|+|+||..+.. .....+ ..-.++|+++.
T Consensus 175 G~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~~---~~i~lvGhSmGG~ial~----~a~~p~----~~~~v~glVL~ 241 (395)
T PLN02652 175 GGSDGL--HGYVPSLDYVVEDTEAFLEKIRSENPG---VPCFLFGHSTGGAVVLK----AASYPS----IEDKLEGIVLT 241 (395)
T ss_pred CCCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECHHHHHHHH----HHhccC----cccccceEEEE
Confidence 988542 223334556677888888777666653 48999999999954433 322211 11358999998
Q ss_pred CCCCC
Q 010909 218 NGVTD 222 (497)
Q Consensus 218 ng~~d 222 (497)
+|+++
T Consensus 242 sP~l~ 246 (395)
T PLN02652 242 SPALR 246 (395)
T ss_pred Ccccc
Confidence 88764
No 29
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.41 E-value=3.4e-05 Score=76.84 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=83.7
Q ss_pred CceEEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCccc
Q 010909 45 SKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (497)
Q Consensus 45 ~~~~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (497)
....-+|+.++ + +++++.+. -++..|+|+.|.|=|=.+=.. |... ..|. .+
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wysw---------r~q~-------~~la------~~ 70 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSW---------RHQI-------PGLA------SR 70 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhh---------hhhh-------hhhh------hc
Confidence 35567888875 3 88888776 577899999999988665221 0000 0111 11
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
-..++.+|.+ |-|+|-.-.. ....+-...+.|+..+|.. +.....++.|++||+ .+|-++...-...
T Consensus 71 ~~rviA~Dlr-GyG~Sd~P~~-~~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGa----ivaw~la~~~Per 137 (322)
T KOG4178|consen 71 GYRVIAPDLR-GYGFSDAPPH-ISEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGA----IVAWRLALFYPER 137 (322)
T ss_pred ceEEEecCCC-CCCCCCCCCC-cceeeHHHHHHHHHHHHHH-------hccceeEEEeccchh----HHHHHHHHhChhh
Confidence 1578999998 9999965332 1223455566676666653 445689999999999 4555444322111
Q ss_pred CCCeeeeeeeeccCCCCCcccc
Q 010909 205 EKPVLNFKGYLVGNGVTDEEID 226 (497)
Q Consensus 205 ~~~~inLkGi~iGng~~dp~~q 226 (497)
.+..+++.+... |+..+|...
T Consensus 138 v~~lv~~nv~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 138 VDGLVTLNVPFP-NPKLKPLDS 158 (322)
T ss_pred cceEEEecCCCC-Ccccchhhh
Confidence 111345555555 666666543
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.39 E-value=3e-05 Score=81.43 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=67.1
Q ss_pred CCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcc-cCc
Q 010909 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYV-TGD 152 (497)
Q Consensus 74 ~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~-~~~ 152 (497)
...|.||.|.|.++.+..+.... ..| .+..+++-+|.| |.|.|-... +. .+.
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~----------------~~L-------~~~~~vi~~D~r-G~G~S~~~~---~~~~~~ 155 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNF----------------DAL-------ASRFRVIAIDQL-GWGGSSRPD---FTCKST 155 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHH----------------HHH-------HhCCEEEEECCC-CCCCCCCCC---cccccH
Confidence 35799999999977655432110 012 123689999999 999884321 11 122
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 153 ~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
++..+.+.+.+.+|.+.. ...+++|.|+|+|| .+|..+.... +-.++++++.++..
T Consensus 156 ~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG----~la~~~a~~~------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 156 EETEAWFIDSFEEWRKAK---NLSNFILLGHSFGG----YVAAKYALKH------PEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHH----HHHHHHHHhC------chhhcEEEEECCcc
Confidence 344445566666666543 23589999999999 4555444332 24588888887764
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.39 E-value=3e-06 Score=82.70 Aligned_cols=61 Identities=15% Similarity=-0.015 Sum_probs=49.3
Q ss_pred hcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHH
Q 010909 408 LRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDF 487 (497)
Q Consensus 408 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m 487 (497)
.-.++|||..|..|.+++....+...+.+ .+ ..++.+.++||+++.++|+...+.
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i------------------------~~-~~~~~i~~~gH~~~~e~p~~f~~~ 248 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLW------------------------PH-SESYIFAKAAHAPFISHPAEFCHL 248 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhC------------------------CC-CeEEEeCCCCCCccccCHHHHHHH
Confidence 34699999999999999876554333332 23 778999999999999999999999
Q ss_pred HHHHHc
Q 010909 488 YSRFLA 493 (497)
Q Consensus 488 ~~~fl~ 493 (497)
+.+|-.
T Consensus 249 l~~~~~ 254 (256)
T PRK10349 249 LVALKQ 254 (256)
T ss_pred HHHHhc
Confidence 998854
No 32
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.28 E-value=3.7e-05 Score=76.96 Aligned_cols=85 Identities=14% Similarity=0.194 Sum_probs=61.3
Q ss_pred ccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhccc
Q 010909 123 TKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGID 202 (497)
Q Consensus 123 ~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~ 202 (497)
.+.-||-.||+| |-|.|-. ..+..+.+.+-+.+.+-+.+|..+.. + .+.+|.|||+|| +||..-....
T Consensus 114 a~~~~vyaiDll-G~G~SSR---P~F~~d~~~~e~~fvesiE~WR~~~~-L--~KmilvGHSfGG----YLaa~YAlKy- 181 (365)
T KOG4409|consen 114 AKIRNVYAIDLL-GFGRSSR---PKFSIDPTTAEKEFVESIEQWRKKMG-L--EKMILVGHSFGG----YLAAKYALKY- 181 (365)
T ss_pred hhcCceEEeccc-CCCCCCC---CCCCCCcccchHHHHHHHHHHHHHcC-C--cceeEeeccchH----HHHHHHHHhC-
Confidence 346799999999 9999854 23444444555688999999998773 3 489999999999 5555433322
Q ss_pred CCCCCeeeeeeeeccCCCCCcc
Q 010909 203 AGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 203 ~~~~~~inLkGi~iGng~~dp~ 224 (497)
+=.++-++|.+||--|.
T Consensus 182 -----PerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 182 -----PERVEKLILVSPWGFPE 198 (365)
T ss_pred -----hHhhceEEEeccccccc
Confidence 23488899999997665
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=98.27 E-value=0.00012 Score=74.71 Aligned_cols=125 Identities=13% Similarity=0.017 Sum_probs=76.4
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccc
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtG 138 (497)
+..++|..+... ..+|+||.+.|-.+.+..+.-+ .+. +. .+-.+++-+|.| |.|
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y~~~---~~~-------------l~------~~g~~v~~~D~~-G~G 93 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVKYAEL---AYD-------------LF------HLGYDVLIIDHR-GQG 93 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHHHHHH---HHH-------------HH------HCCCeEEEEcCC-CCC
Confidence 667888776532 3468899999985544333221 111 11 122488999988 999
Q ss_pred cccccCCC---CcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeee
Q 010909 139 LSYSENKT---DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYL 215 (497)
Q Consensus 139 fS~~~~~~---~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ 215 (497)
.|...... +...+-+..++|+..+++...+.++ ..++++.|+|+|| .+|....... +-.++|++
T Consensus 94 ~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG----~ia~~~a~~~------p~~v~~lv 160 (330)
T PRK10749 94 RSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGG----AILTLFLQRH------PGVFDAIA 160 (330)
T ss_pred CCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHH----HHHHHHHHhC------CCCcceEE
Confidence 98532111 1112445667777777776554433 4689999999999 4444433322 12478999
Q ss_pred ccCCCCC
Q 010909 216 VGNGVTD 222 (497)
Q Consensus 216 iGng~~d 222 (497)
+.+|...
T Consensus 161 l~~p~~~ 167 (330)
T PRK10749 161 LCAPMFG 167 (330)
T ss_pred EECchhc
Confidence 9888754
No 34
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.27 E-value=3.1e-05 Score=73.35 Aligned_cols=60 Identities=13% Similarity=-0.015 Sum_probs=49.1
Q ss_pred hcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHH
Q 010909 408 LRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDF 487 (497)
Q Consensus 408 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m 487 (497)
+-..+||+.+|..|.+++....+.+.+.+ .+ -++..+.++||+++.++|+...+.
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~e~p~~~~~~ 240 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLA------------------------PH-SELYIFAKAAHAPFLSHAEAFCAL 240 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhC------------------------CC-CeEEEeCCCCCCccccCHHHHHHH
Confidence 33689999999999999987665544432 12 567789999999999999999999
Q ss_pred HHHHH
Q 010909 488 YSRFL 492 (497)
Q Consensus 488 ~~~fl 492 (497)
+.+||
T Consensus 241 i~~fi 245 (245)
T TIGR01738 241 LVAFK 245 (245)
T ss_pred HHhhC
Confidence 99986
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.24 E-value=5.8e-05 Score=77.69 Aligned_cols=59 Identities=17% Similarity=0.308 Sum_probs=47.4
Q ss_pred hcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHH
Q 010909 408 LRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDF 487 (497)
Q Consensus 408 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m 487 (497)
.-.++||+.+|+.|.+|+....+ .+ +++ .++..+.++||+...++|+...+.
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~~----~l-----------------------~~~-~~~~~~~~~gH~~~~e~p~~~~~~ 363 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHAQ----GL-----------------------PDG-VAVHVLPGAGHMPQMEAAADVNRL 363 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHHh----hc-----------------------cCC-CeEEEeCCCCCChhhhCHHHHHHH
Confidence 34689999999999999854221 11 123 778889999999999999999999
Q ss_pred HHHHHcC
Q 010909 488 YSRFLAG 494 (497)
Q Consensus 488 ~~~fl~g 494 (497)
+.+|+.+
T Consensus 364 i~~fl~~ 370 (371)
T PRK14875 364 LAEFLGK 370 (371)
T ss_pred HHHHhcc
Confidence 9999965
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.19 E-value=6.3e-05 Score=71.14 Aligned_cols=105 Identities=23% Similarity=0.261 Sum_probs=62.9
Q ss_pred CCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHH
Q 010909 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (497)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~ 155 (497)
+|.||.+.|.+|.+..+-.+. ..|. +-.+++-+|.| |.|.|..... ....+.++.
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~----------------~~L~-------~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~ 55 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALI----------------ELLG-------PHFRCLAIDLP-GHGSSQSPDE-IERYDFEEA 55 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHH----------------HHhc-------ccCeEEEEcCC-CCCCCCCCCc-cChhhHHHH
Confidence 478999999988776542211 1121 23589999988 9998854211 111233344
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 156 a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
++++ +..+.+.. ...+++|.|+|+||..+..+|.+ . .-.++++++.++..
T Consensus 56 ~~~~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~----~------~~~v~~lil~~~~~ 105 (251)
T TIGR03695 56 AQDI---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQ----Y------PERVQGLILESGSP 105 (251)
T ss_pred HHHH---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHh----C------chheeeeEEecCCC
Confidence 4442 33333333 34689999999999655555443 2 13588888877653
No 37
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.16 E-value=6.4e-05 Score=76.92 Aligned_cols=62 Identities=13% Similarity=0.240 Sum_probs=50.7
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCC-cHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYK-PREALDFY 488 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~Dq-P~~a~~m~ 488 (497)
.+++|+.+|+.|.+++..+++.+.+++. ..+ -++..+.+++|++..+. ++.+++-+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~----------------------~~~-~~l~~~~g~~H~i~~E~~~~~v~~~i 326 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLS----------------------ISN-KELHTLEDMDHVITIEPGNEEVLKKI 326 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhcc----------------------CCC-cEEEEECCCCCCCccCCCHHHHHHHH
Confidence 6899999999999999999888777643 112 56677899999999886 67888888
Q ss_pred HHHHcC
Q 010909 489 SRFLAG 494 (497)
Q Consensus 489 ~~fl~g 494 (497)
..||.+
T Consensus 327 ~~wL~~ 332 (332)
T TIGR01607 327 IEWISN 332 (332)
T ss_pred HHHhhC
Confidence 899864
No 38
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.16 E-value=3e-05 Score=86.00 Aligned_cols=139 Identities=18% Similarity=0.219 Sum_probs=86.1
Q ss_pred EEecCCCCeeEEEEEEecCC-CCC-CCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCC-cccccce
Q 010909 52 VTVDESHGRNLFYYFVESEG-NPS-KDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYS-WTKVSSI 128 (497)
Q Consensus 52 ~~v~~~~~~~lfy~f~~s~~-~~~-~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~s-W~~~anl 128 (497)
+.+....|..+..|++.... ++. +-|+|+++.||| +++.+ +.+ ..+... +.+-..|
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~-------~~~------------~~~~q~~~~~G~~V 426 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVG-------YSF------------NPEIQVLASAGYAV 426 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccccc-------ccc------------chhhHHHhcCCeEE
Confidence 33433347788888877543 333 249999999999 44433 011 111112 2345689
Q ss_pred EeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCe
Q 010909 129 IYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPV 208 (497)
Q Consensus 129 lfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~ 208 (497)
|+++..--+||+..=.......--....+|+.+++. |+.+.|..-...+.|+|.|||| +++..++... .
T Consensus 427 ~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~~------~ 495 (620)
T COG1506 427 LAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATKT------P 495 (620)
T ss_pred EEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhcC------c
Confidence 999966556654321110000011134677888888 8999998877889999999999 8888887654 1
Q ss_pred eeeeeeeccCCCCCc
Q 010909 209 LNFKGYLVGNGVTDE 223 (497)
Q Consensus 209 inLkGi~iGng~~dp 223 (497)
.++..+...|.++.
T Consensus 496 -~f~a~~~~~~~~~~ 509 (620)
T COG1506 496 -RFKAAVAVAGGVDW 509 (620)
T ss_pred -hhheEEeccCcchh
Confidence 46666666665554
No 39
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.14 E-value=0.0003 Score=75.23 Aligned_cols=60 Identities=18% Similarity=0.135 Sum_probs=50.2
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCC-CCcHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPE-YKPREALDFY 488 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~-DqP~~a~~m~ 488 (497)
.++|||..|+.|.++|....+...+.+. + -.++.|.+|||+.+. ++|+...+.+
T Consensus 418 ~vPtLII~Ge~D~ivP~~~~~~la~~iP------------------------~-a~l~vI~~aGH~~~v~e~p~~fa~~L 472 (481)
T PLN03087 418 KCDVAIFHGGDDELIPVECSYAVKAKVP------------------------R-ARVKVIDDKDHITIVVGRQKEFAREL 472 (481)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHhCC------------------------C-CEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 6999999999999999887776555532 2 567889999999996 9999999999
Q ss_pred HHHHcC
Q 010909 489 SRFLAG 494 (497)
Q Consensus 489 ~~fl~g 494 (497)
.+|...
T Consensus 473 ~~F~~~ 478 (481)
T PLN03087 473 EEIWRR 478 (481)
T ss_pred HHHhhc
Confidence 999753
No 40
>PRK07581 hypothetical protein; Validated
Probab=97.97 E-value=0.00096 Score=68.15 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=50.7
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcC-ceecCCCCCcHHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKG-AGHTVPEYKPREALDF 487 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~-AGHmVP~DqP~~a~~m 487 (497)
-.++||+..|+.|.+++....+.+.+.+. + ..+++|.+ |||+++.+||+....+
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~-a~l~~i~~~~GH~~~~~~~~~~~~~ 328 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALIP------------------------N-AELRPIESIWGHLAGFGQNPADIAF 328 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------C-CeEEEeCCCCCccccccCcHHHHHH
Confidence 36899999999999999887776655532 2 56788898 9999999999999999
Q ss_pred HHHHHc
Q 010909 488 YSRFLA 493 (497)
Q Consensus 488 ~~~fl~ 493 (497)
+++||.
T Consensus 329 ~~~~~~ 334 (339)
T PRK07581 329 IDAALK 334 (339)
T ss_pred HHHHHH
Confidence 999984
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.97 E-value=0.00017 Score=87.99 Aligned_cols=108 Identities=19% Similarity=0.163 Sum_probs=67.2
Q ss_pred CCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCC-----C
Q 010909 72 NPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENK-----T 146 (497)
Q Consensus 72 ~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~-----~ 146 (497)
+.+..|.||+|+|.+|.+..+-.+.+ .| .+..+++.+|.| |.|.|..... .
T Consensus 1367 ~~~~~~~vVllHG~~~s~~~w~~~~~----------------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~ 1422 (1655)
T PLN02980 1367 QNAEGSVVLFLHGFLGTGEDWIPIMK----------------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQT 1422 (1655)
T ss_pred CCCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------hCCCEEEEEcCC-CCCCCCCccccccccc
Confidence 34457899999999998876432221 11 123589999999 9998854321 0
Q ss_pred CcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCC
Q 010909 147 DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (497)
Q Consensus 147 ~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~ 220 (497)
....+-+..++++.+++.. +...+++|+|+|+|| .+|..+.... +-.++++++.++.
T Consensus 1423 ~~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG----~iAl~~A~~~------P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1423 EPTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGA----RIALYMALRF------SDKIEGAVIISGS 1479 (1655)
T ss_pred cccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHH----HHHHHHHHhC------hHhhCEEEEECCC
Confidence 1112344556666655543 234689999999999 5555544332 2357788777654
No 42
>PLN02965 Probable pheophorbidase
Probab=97.90 E-value=0.00019 Score=70.18 Aligned_cols=60 Identities=5% Similarity=0.032 Sum_probs=49.8
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
-.+++|+..|..|.+++....+...+.+ .+ -.++.+.+|||++..++|++...++
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~------------------------~~-a~~~~i~~~GH~~~~e~p~~v~~~l 246 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENW------------------------PP-AQTYVLEDSDHSAFFSVPTTLFQYL 246 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhC------------------------Cc-ceEEEecCCCCchhhcCHHHHHHHH
Confidence 4699999999999999987665554443 22 5678889999999999999999999
Q ss_pred HHHHc
Q 010909 489 SRFLA 493 (497)
Q Consensus 489 ~~fl~ 493 (497)
.+|+.
T Consensus 247 ~~~~~ 251 (255)
T PLN02965 247 LQAVS 251 (255)
T ss_pred HHHHH
Confidence 99975
No 43
>PLN02511 hydrolase
Probab=97.85 E-value=0.00045 Score=72.27 Aligned_cols=135 Identities=16% Similarity=0.164 Sum_probs=76.4
Q ss_pred EEEEEecCCCCeeEEE-EEEe-cCCCCCCCCEEEEeCCCCchhhH-h-hHhhhcCCeeeeCCCCCCCCCcccccCCCccc
Q 010909 49 SGYVTVDESHGRNLFY-YFVE-SEGNPSKDPVVLWLNGGPGCSSF-D-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (497)
Q Consensus 49 sGy~~v~~~~~~~lfy-~f~~-s~~~~~~~PlvlWlnGGPG~SS~-~-g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (497)
--++...+ |..+.+ |+.. ....+.+.|+||.|.|..|+|.. + -.+. ..+ . .+
T Consensus 73 re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~----------------~~~--~----~~ 128 (388)
T PLN02511 73 RECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML----------------LRA--R----SK 128 (388)
T ss_pred EEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH----------------HHH--H----HC
Confidence 34555543 445554 4322 12334678999999999998742 1 1010 001 0 12
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
-.+++-+|.| |.|-|-......+ ....++|+.++|+..-.++| ..+++++|+|.||. ++...+.+..
T Consensus 129 g~~vv~~d~r-G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~----i~~~yl~~~~-- 195 (388)
T PLN02511 129 GWRVVVFNSR-GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGAN----ILVNYLGEEG-- 195 (388)
T ss_pred CCEEEEEecC-CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHH----HHHHHHHhcC--
Confidence 3488999988 9988854332222 12345677777776666666 35899999999994 4444333221
Q ss_pred CCCeeeeeeeeccCCCCC
Q 010909 205 EKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 205 ~~~~inLkGi~iGng~~d 222 (497)
....|++.++.++-.+
T Consensus 196 --~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 196 --ENCPLSGAVSLCNPFD 211 (388)
T ss_pred --CCCCceEEEEECCCcC
Confidence 1234666554444334
No 44
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.67 E-value=0.0003 Score=70.92 Aligned_cols=126 Identities=22% Similarity=0.325 Sum_probs=73.5
Q ss_pred EEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccce
Q 010909 49 SGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSI 128 (497)
Q Consensus 49 sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 128 (497)
.+|+.+.+ +..++|.-. ..+. .|-||.+.||||.++..... . .+. .+..++
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~~~~--------~---------~~~------~~~~~v 56 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDPGCR--------R---------FFD------PETYRI 56 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCHHHH--------h---------ccC------ccCCEE
Confidence 47888764 677877542 2233 34468899999876531000 0 000 134689
Q ss_pred EeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCe
Q 010909 129 IYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPV 208 (497)
Q Consensus 129 lfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~ 208 (497)
+-+|.| |.|.|..... ....+..+.++++..++ +.. ...+++++|+||||. ++..+.... +
T Consensus 57 i~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~----~~l---~~~~~~lvG~S~GG~----ia~~~a~~~------p 117 (306)
T TIGR01249 57 VLFDQR-GCGKSTPHAC-LEENTTWDLVADIEKLR----EKL---GIKNWLVFGGSWGST----LALAYAQTH------P 117 (306)
T ss_pred EEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHH----HHc---CCCCEEEEEECHHHH----HHHHHHHHC------h
Confidence 999999 9999964321 11123334455544443 333 235799999999995 444443322 2
Q ss_pred eeeeeeeccCCCCC
Q 010909 209 LNFKGYLVGNGVTD 222 (497)
Q Consensus 209 inLkGi~iGng~~d 222 (497)
-.++++++.+..+.
T Consensus 118 ~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 118 EVVTGLVLRGIFLL 131 (306)
T ss_pred HhhhhheeeccccC
Confidence 35788888777654
No 45
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.66 E-value=0.00017 Score=73.89 Aligned_cols=132 Identities=21% Similarity=0.229 Sum_probs=79.7
Q ss_pred EEEEEEec--CCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCcccc
Q 010909 62 LFYYFVES--EGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGL 139 (497)
Q Consensus 62 lfy~f~~s--~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGf 139 (497)
-.||++++ +.+|++||++|++.|| |.+.+.=|..+.. -.+-+...+...+|.+|-.+-.
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~----------L~~i~~~l~~~SILvLDYsLt~-- 166 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIEF----------LLNIYKLLPEVSILVLDYSLTS-- 166 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHHH----------HHHHHHHcCCCeEEEEeccccc--
Confidence 46899985 3468889999999999 5555555655431 1111222223499999944332
Q ss_pred ccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCC
Q 010909 140 SYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (497)
Q Consensus 140 S~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng 219 (497)
| ......+++ .-.++.+..+...+.. ...++.|.|+|-||+-+-.+.+++.+.++. .-=|++++.+|
T Consensus 167 ~-~~~~~~yPt----QL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~-----~~Pk~~iLISP 233 (374)
T PF10340_consen 167 S-DEHGHKYPT----QLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL-----PYPKSAILISP 233 (374)
T ss_pred c-ccCCCcCch----HHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC-----CCCceeEEECC
Confidence 0 001112221 1222333333333222 346899999999999999988887664421 22378999999
Q ss_pred CCCccc
Q 010909 220 VTDEEI 225 (497)
Q Consensus 220 ~~dp~~ 225 (497)
|+++..
T Consensus 234 Wv~l~~ 239 (374)
T PF10340_consen 234 WVNLVP 239 (374)
T ss_pred CcCCcC
Confidence 999974
No 46
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.63 E-value=0.0044 Score=61.24 Aligned_cols=129 Identities=20% Similarity=0.154 Sum_probs=84.7
Q ss_pred CCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCcc
Q 010909 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (497)
Q Consensus 58 ~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 137 (497)
.|..+|.-.......++-+-+|+.+.|.=+-||.. |.+.-. .|..+- .-+.-+|++ |.
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~--~~~~a~-------------~l~~~g------~~v~a~D~~-Gh 93 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWR--YQSTAK-------------RLAKSG------FAVYAIDYE-GH 93 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhh--HHHHHH-------------HHHhCC------CeEEEeecc-CC
Confidence 47789875555555456778888888875555321 111000 111111 136678988 99
Q ss_pred ccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeecc
Q 010909 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (497)
Q Consensus 138 GfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iG 217 (497)
|.|- ....+..+-+.+.+|+..|+..+.. .++++..|.|++|||.|| ++|..+..+. +--..|+++.
T Consensus 94 G~Sd--Gl~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGG----AV~Ll~~~k~------p~~w~G~ilv 160 (313)
T KOG1455|consen 94 GRSD--GLHAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGG----AVALLIALKD------PNFWDGAILV 160 (313)
T ss_pred CcCC--CCcccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcch----HHHHHHHhhC------Ccccccceee
Confidence 9996 4556777888888888888876544 446778899999999999 7777776542 2346777776
Q ss_pred CCCC
Q 010909 218 NGVT 221 (497)
Q Consensus 218 ng~~ 221 (497)
.|..
T Consensus 161 aPmc 164 (313)
T KOG1455|consen 161 APMC 164 (313)
T ss_pred eccc
Confidence 6664
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.58 E-value=0.0043 Score=61.58 Aligned_cols=78 Identities=21% Similarity=0.137 Sum_probs=53.1
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCC
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 205 (497)
.+++-+|.| |.|-|.... .+-.+..+|+.++++.+.+..|.+ .++.++|+|.||. ++.......
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~----~a~~~a~~~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAAS----AALLYAPAD---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHH----HHHHHhhhC----
Confidence 589999998 999885321 133345677777777666666544 4699999999994 333332211
Q ss_pred CCeeeeeeeeccCCCCC
Q 010909 206 KPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 206 ~~~inLkGi~iGng~~d 222 (497)
-.++|+++.||++.
T Consensus 122 ---~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVR 135 (274)
T ss_pred ---CCccEEEEECCccC
Confidence 25899999998854
No 48
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=97.52 E-value=0.006 Score=63.54 Aligned_cols=64 Identities=17% Similarity=0.125 Sum_probs=51.2
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEc-CceecCCCCCcHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIK-GAGHTVPEYKPREALDFY 488 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~-~AGHmVP~DqP~~a~~m~ 488 (497)
.++|||..|+.|.+++....+...+.+. + .+...+++.|. ++||+.+.++|++..+.+
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~-----------------~----a~~~~~l~~i~~~~GH~~~le~p~~~~~~L 367 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALL-----------------A----AGADVSYAEIDSPYGHDAFLLDDPRYGRLV 367 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHH-----------------h----cCCCeEEEEeCCCCCchhHhcCHHHHHHHH
Confidence 6899999999999999887776555532 1 11125778886 999999999999999999
Q ss_pred HHHHcC
Q 010909 489 SRFLAG 494 (497)
Q Consensus 489 ~~fl~g 494 (497)
.+||..
T Consensus 368 ~~FL~~ 373 (379)
T PRK00175 368 RAFLER 373 (379)
T ss_pred HHHHHh
Confidence 999965
No 49
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.39 E-value=0.00077 Score=64.76 Aligned_cols=100 Identities=21% Similarity=0.191 Sum_probs=64.1
Q ss_pred CCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHH
Q 010909 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (497)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~ 155 (497)
.|.||.+.|.||.+..+-.+. | .+ +..+++-+|.| |.|.|..... .+-++.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~---~-------------~l--------~~~~vi~~D~~-G~G~S~~~~~----~~~~~~ 52 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVG---E-------------AL--------PDYPRLYIDLP-GHGGSAAISV----DGFADV 52 (242)
T ss_pred CCEEEEECCCCCChHHHHHHH---H-------------Hc--------CCCCEEEecCC-CCCCCCCccc----cCHHHH
Confidence 588999999988876653222 1 11 13699999988 9999853221 244455
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCC
Q 010909 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (497)
Q Consensus 156 a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~ 220 (497)
++++.++|.. +...+++++|+|+|| .+|..+..... .-.++++++.++.
T Consensus 53 ~~~l~~~l~~-------~~~~~~~lvG~S~Gg----~va~~~a~~~~-----~~~v~~lvl~~~~ 101 (242)
T PRK11126 53 SRLLSQTLQS-------YNILPYWLVGYSLGG----RIAMYYACQGL-----AGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHH-------cCCCCeEEEEECHHH----HHHHHHHHhCC-----cccccEEEEeCCC
Confidence 6666665543 234689999999999 45554443321 1127788887654
No 50
>PLN02872 triacylglycerol lipase
Probab=97.35 E-value=0.0029 Score=66.30 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=48.5
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceec---CCCCCcHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHT---VPEYKPREALD 486 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHm---VP~DqP~~a~~ 486 (497)
.++|+||.|+.|.+++....+++.+.|. +.-.+..+.++||+ ...+.|+..++
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp------------------------~~~~l~~l~~~gH~dfi~~~eape~V~~ 380 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP------------------------SKPELLYLENYGHIDFLLSTSAKEDVYN 380 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC------------------------CccEEEEcCCCCCHHHHhCcchHHHHHH
Confidence 5899999999999999999888888864 00234557899996 45588998888
Q ss_pred HHHHHHcC
Q 010909 487 FYSRFLAG 494 (497)
Q Consensus 487 m~~~fl~g 494 (497)
-+.+|+..
T Consensus 381 ~Il~fL~~ 388 (395)
T PLN02872 381 HMIQFFRS 388 (395)
T ss_pred HHHHHHHH
Confidence 88888853
No 51
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.89 E-value=0.0049 Score=58.61 Aligned_cols=54 Identities=17% Similarity=0.133 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 157 ~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
.++.+++....++++ ....+++|+|+|.||. +|..+.... .-.+.++++..|..
T Consensus 77 ~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~----~a~~~a~~~------p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 77 ESLHQLIDAVKANYS-IDPNRVYVTGLSAGGG----MTAVLGCTY------PDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHhcC-cChhheEEEEECHHHH----HHHHHHHhC------chhheEEEeecCCc
Confidence 344445554444543 4446899999999994 455544332 12366776666653
No 52
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.82 E-value=0.019 Score=56.94 Aligned_cols=52 Identities=17% Similarity=0.061 Sum_probs=33.1
Q ss_pred HHHHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 161 TFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 161 ~fL~~F~~~-~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
+.|..+++. ++ ....+++|+|+|+|| ++|..+.... +-.+++++..+|+.++
T Consensus 123 ~~l~~~~~~~~~-~~~~~~~~~G~S~GG----~~a~~~a~~~------p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 123 QELPALVAAQFP-LDGERQGITGHSMGG----HGALVIALKN------PDRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHhhCC-CCCCceEEEEEChhH----HHHHHHHHhC------cccceEEEEECCccCc
Confidence 333344443 33 445689999999999 4555554332 1236788888888775
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=96.81 E-value=0.014 Score=61.56 Aligned_cols=79 Identities=19% Similarity=0.129 Sum_probs=52.2
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCC
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 205 (497)
.++|-+|.| |+|.|.... ...+ ...+...+..++...|.....++.|+|.|+||..++.+|.. .
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~----~---- 286 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LTQD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYL----E---- 286 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---cccc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHh----C----
Confidence 489999999 999985321 1111 12222344556666776666789999999999776666532 1
Q ss_pred CCeeeeeeeeccCCCCC
Q 010909 206 KPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 206 ~~~inLkGi~iGng~~d 222 (497)
.-.++++++.+|.++
T Consensus 287 --p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 --PPRLKAVACLGPVVH 301 (414)
T ss_pred --CcCceEEEEECCccc
Confidence 125788888877764
No 54
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.76 E-value=0.017 Score=57.20 Aligned_cols=128 Identities=11% Similarity=0.030 Sum_probs=72.3
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhh-HhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCcc
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSS-FDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS-~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 137 (497)
..++|.|+++.... ..+|+||.++|-.+-.. ..-.+..... .|. .+-.+++-+|.| |.
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la~-------------~La------~~Gy~Vl~~Dl~-G~ 67 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQAR-------------AFA------AGGFGVLQIDLY-GC 67 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHHH-------------HHH------HCCCEEEEECCC-CC
Confidence 45578877765432 23799999998532100 0001110000 011 123589999999 99
Q ss_pred ccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeecc
Q 010909 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (497)
Q Consensus 138 GfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iG 217 (497)
|.|...... .+.....+|+..+++ |++.. ...+++|+|+|.||..+..+|.+ . +-.++++++-
T Consensus 68 G~S~g~~~~---~~~~~~~~Dv~~ai~-~L~~~---~~~~v~LvG~SmGG~vAl~~A~~----~------p~~v~~lVL~ 130 (266)
T TIGR03101 68 GDSAGDFAA---ARWDVWKEDVAAAYR-WLIEQ---GHPPVTLWGLRLGALLALDAANP----L------AAKCNRLVLW 130 (266)
T ss_pred CCCCCcccc---CCHHHHHHHHHHHHH-HHHhc---CCCCEEEEEECHHHHHHHHHHHh----C------ccccceEEEe
Confidence 988543221 122334455554433 34433 23589999999999655544422 1 2357889999
Q ss_pred CCCCCcc
Q 010909 218 NGVTDEE 224 (497)
Q Consensus 218 ng~~dp~ 224 (497)
+|.++..
T Consensus 131 ~P~~~g~ 137 (266)
T TIGR03101 131 QPVVSGK 137 (266)
T ss_pred ccccchH
Confidence 8887754
No 55
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.69 E-value=0.023 Score=57.27 Aligned_cols=138 Identities=21% Similarity=0.208 Sum_probs=91.1
Q ss_pred ceEEEEEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccc
Q 010909 46 KHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKV 125 (497)
Q Consensus 46 ~~~sGy~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 125 (497)
...-|+.... .+..++|+-++..+++. .+|++++|.=..+.-+-.+. . .+.. +=
T Consensus 8 ~~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry~~la---~-------------~l~~------~G 61 (298)
T COG2267 8 TRTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRYEELA---D-------------DLAA------RG 61 (298)
T ss_pred ccccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHHHHHHH---H-------------HHHh------CC
Confidence 3445565554 37889999888775544 89999999855554332211 0 1111 11
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCC
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 205 (497)
..++=+|+| |.|.|.. ...+...+-.+.-+|+.+|++..-..+| ..|+||+|+|-|| .||..-+.+.
T Consensus 62 ~~V~~~D~R-GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg----~Ia~~~~~~~---- 128 (298)
T COG2267 62 FDVYALDLR-GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGG----LIALLYLARY---- 128 (298)
T ss_pred CEEEEecCC-CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHH----HHHHHHHHhC----
Confidence 378889999 9999973 2233333445556666666666555444 4699999999999 6666655544
Q ss_pred CCeeeeeeeeccCCCCCcc
Q 010909 206 KPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 206 ~~~inLkGi~iGng~~dp~ 224 (497)
.-+++|++|-+|++...
T Consensus 129 --~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 129 --PPRIDGLVLSSPALGLG 145 (298)
T ss_pred --CccccEEEEECccccCC
Confidence 25799999999998765
No 56
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=96.50 E-value=0.016 Score=57.56 Aligned_cols=59 Identities=14% Similarity=0.029 Sum_probs=47.3
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
.+++++..|..|.++|..-.+++++.+. . -..+++ .+||+.+..+|+...+++.
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~------------------------~-~~~~~l-~~gH~p~ls~P~~~~~~i~ 264 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP------------------------P-SQVYEL-ESDHSPFFSTPFLLFGLLI 264 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC------------------------c-cEEEEE-CCCCCccccCHHHHHHHHH
Confidence 5899999999999999876666666532 1 245666 5999999999999999999
Q ss_pred HHHcC
Q 010909 490 RFLAG 494 (497)
Q Consensus 490 ~fl~g 494 (497)
++...
T Consensus 265 ~~a~~ 269 (273)
T PLN02211 265 KAAAS 269 (273)
T ss_pred HHHHH
Confidence 87654
No 57
>PLN02442 S-formylglutathione hydrolase
Probab=96.43 E-value=0.04 Score=55.03 Aligned_cols=57 Identities=14% Similarity=0.070 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 155 ~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
..+++...+.+++.. +...+++|+|.|+|| ++|..+.... +-.+++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG----~~a~~~a~~~------p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGG----HGALTIYLKN------PDKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhH----HHHHHHHHhC------chhEEEEEEECCccCcc
Confidence 344555555555543 344579999999999 4444444332 12478889899988754
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.23 E-value=0.043 Score=51.23 Aligned_cols=63 Identities=24% Similarity=0.283 Sum_probs=45.3
Q ss_pred HhhcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHH
Q 010909 406 LTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREAL 485 (497)
Q Consensus 406 Ll~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~ 485 (497)
+.....++++..|+.|.+.+....+.+.+.+. + ...++++.++||+...++|+...
T Consensus 217 ~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~-----------------~-------~~~~~~~~~~gH~~~~~~p~~~~ 272 (282)
T COG0596 217 LARITVPTLIIHGEDDPVVPAELARRLAAALP-----------------N-------DARLVVIPGAGHFPHLEAPEAFA 272 (282)
T ss_pred hccCCCCeEEEecCCCCcCCHHHHHHHHhhCC-----------------C-------CceEEEeCCCCCcchhhcHHHHH
Confidence 34457999999999996666544333333322 0 26788899999999999999777
Q ss_pred HHHHHHH
Q 010909 486 DFYSRFL 492 (497)
Q Consensus 486 ~m~~~fl 492 (497)
+.+..|+
T Consensus 273 ~~i~~~~ 279 (282)
T COG0596 273 AALLAFL 279 (282)
T ss_pred HHHHHHH
Confidence 7777654
No 59
>PRK10566 esterase; Provisional
Probab=96.19 E-value=0.053 Score=52.36 Aligned_cols=61 Identities=31% Similarity=0.407 Sum_probs=46.0
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
..++|+.+|+.|.+++...++++.+.++=. | .+.+++++++.++||.+. | ..++-+.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~---------------g----~~~~~~~~~~~~~~H~~~---~-~~~~~~~ 242 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRER---------------G----LDKNLTCLWEPGVRHRIT---P-EALDAGV 242 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc---------------C----CCcceEEEecCCCCCccC---H-HHHHHHH
Confidence 478999999999999999988888776411 1 111388999999999975 3 4566666
Q ss_pred HHHc
Q 010909 490 RFLA 493 (497)
Q Consensus 490 ~fl~ 493 (497)
+||.
T Consensus 243 ~fl~ 246 (249)
T PRK10566 243 AFFR 246 (249)
T ss_pred HHHH
Confidence 6765
No 60
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=95.85 E-value=0.019 Score=53.96 Aligned_cols=59 Identities=27% Similarity=0.307 Sum_probs=48.4
Q ss_pred HhhcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHH
Q 010909 406 LTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREAL 485 (497)
Q Consensus 406 Ll~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~ 485 (497)
+-.-.+++|+++|..|.+++....+...+.+ .+ -.++.+.++||+...+.|+..-
T Consensus 171 l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~------------------------~~-~~~~~~~~~GH~~~~~~~~~~~ 225 (230)
T PF00561_consen 171 LSNIKVPTLIIWGEDDPLVPPESSEQLAKLI------------------------PN-SQLVLIEGSGHFAFLEGPDEFN 225 (230)
T ss_dssp HTTTTSEEEEEEETTCSSSHHHHHHHHHHHS------------------------TT-EEEEEETTCCSTHHHHSHHHHH
T ss_pred ccccCCCeEEEEeCCCCCCCHHHHHHHHHhc------------------------CC-CEEEECCCCChHHHhcCHHhhh
Confidence 3345799999999999999998887744443 23 7788999999999999999988
Q ss_pred HHHH
Q 010909 486 DFYS 489 (497)
Q Consensus 486 ~m~~ 489 (497)
+++.
T Consensus 226 ~~i~ 229 (230)
T PF00561_consen 226 EIII 229 (230)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8875
No 61
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.77 E-value=0.22 Score=49.41 Aligned_cols=125 Identities=18% Similarity=0.291 Sum_probs=68.9
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccc-----eEeecC
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS-----IIYLDS 133 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~an-----llfiDq 133 (497)
+...-||++.....++..||||-|.|+=|..+.. ++-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~------------------------~~~sg~d~lAd~~gFlV~yPdg 99 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ------------------------LHGTGWDALADREGFLVAYPDG 99 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHh------------------------hcccchhhhhcccCcEEECcCc
Confidence 5667788888777788889999999996665432 12223444433 344331
Q ss_pred ------CCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCC
Q 010909 134 ------PAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKP 207 (497)
Q Consensus 134 ------PvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~ 207 (497)
|-+.|-++...+. ....+.+..+.+.+.....+| ......+||+|-|-|| .++.++.-.-
T Consensus 100 ~~~~wn~~~~~~~~~p~~~---~~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG----~Ma~~lac~~------ 165 (312)
T COG3509 100 YDRAWNANGCGNWFGPADR---RRGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGG----RMANRLACEY------ 165 (312)
T ss_pred cccccCCCcccccCCcccc---cCCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHH----HHHHHHHhcC------
Confidence 2233333322211 111122333444444444455 2455689999999999 5555554321
Q ss_pred eeeeeeeeccCCCC
Q 010909 208 VLNFKGYLVGNGVT 221 (497)
Q Consensus 208 ~inLkGi~iGng~~ 221 (497)
.--+.++++..|..
T Consensus 166 p~~faa~A~VAg~~ 179 (312)
T COG3509 166 PDIFAAIAPVAGLL 179 (312)
T ss_pred cccccceeeeeccc
Confidence 11356666666665
No 62
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=95.74 E-value=0.058 Score=55.26 Aligned_cols=62 Identities=11% Similarity=0.134 Sum_probs=51.3
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEc-CceecCCCCCcHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIK-GAGHTVPEYKPREALDFY 488 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~-~AGHmVP~DqP~~a~~m~ 488 (497)
.+++||..|+.|.+++....+...+.+. .+ -.+++|. +|||+++.++|++...++
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p~-a~l~~i~~~aGH~~~lE~Pe~~~~~l 332 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------PR-GSLRVLRSPYGHDAFLKETDRIDAIL 332 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------CC-CeEEEEeCCccHHHHhcCHHHHHHHH
Confidence 5899999999999999887777666542 12 5677887 499999999999999999
Q ss_pred HHHHcCC
Q 010909 489 SRFLAGK 495 (497)
Q Consensus 489 ~~fl~g~ 495 (497)
.+||...
T Consensus 333 ~~FL~~~ 339 (343)
T PRK08775 333 TTALRST 339 (343)
T ss_pred HHHHHhc
Confidence 9999653
No 63
>PRK10985 putative hydrolase; Provisional
Probab=95.70 E-value=0.16 Score=51.69 Aligned_cols=46 Identities=15% Similarity=0.042 Sum_probs=34.7
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCC
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYK 480 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~Dq 480 (497)
.+++|+.+|+.|.+++....+.. .++ .. +.+++.+.++||+...+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~-~~~-----------------------~~-~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKP-ESL-----------------------PP-NVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHH-HHh-----------------------CC-CeEEEECCCCCceeeCCC
Confidence 68999999999999986644432 221 12 388899999999988764
No 64
>PRK05855 short chain dehydrogenase; Validated
Probab=95.51 E-value=0.061 Score=58.71 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=62.3
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccc
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtG 138 (497)
+..+.|+-+. +.+.|.||.+.|.++.+..+.-+.+ .| .+...++-+|.| |.|
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w~~~~~----------------~L-------~~~~~Vi~~D~~-G~G 63 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVWDGVAP----------------LL-------ADRFRVVAYDVR-GAG 63 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHHHHHHH----------------Hh-------hcceEEEEecCC-CCC
Confidence 5667766432 2347899999999877665432221 12 123689999999 999
Q ss_pred cccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccc
Q 010909 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGI 188 (497)
Q Consensus 139 fS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~ 188 (497)
.|....... ..+.++.++|+.++++..- ...|++|+|+|+||.
T Consensus 64 ~S~~~~~~~-~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~ 106 (582)
T PRK05855 64 RSSAPKRTA-AYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSI 106 (582)
T ss_pred CCCCCCccc-ccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHH
Confidence 996433211 2355677888888887521 134799999999993
No 65
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.42 E-value=0.13 Score=52.65 Aligned_cols=145 Identities=17% Similarity=0.168 Sum_probs=84.8
Q ss_pred EEEEEEecCCCCeeEEEEEEecCCCC--CCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcc-c
Q 010909 48 YSGYVTVDESHGRNLFYYFVESEGNP--SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT-K 124 (497)
Q Consensus 48 ~sGy~~v~~~~~~~lfy~f~~s~~~~--~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~-~ 124 (497)
++.=+.+. ....++.+.|.....+ ..+|++||+.||=-|-+.. . .....+-.++. +
T Consensus 62 ~~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~---------~----------~~~y~~~~~~~a~ 120 (336)
T KOG1515|consen 62 TSKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA---------N----------SPAYDSFCTRLAA 120 (336)
T ss_pred eeeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC---------C----------CchhHHHHHHHHH
Confidence 34444444 3567888888765443 5899999999995553310 0 01112222222 4
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHH-HHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLK-WFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 203 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~-F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~ 203 (497)
.+|.+-| .++|--+-. ..++..-++.-+.+..++.+ |.+.+=.. ..++|+|.|-||..+-.+|.++.+..
T Consensus 121 ~~~~vvv----SVdYRLAPE-h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~--~rv~l~GDSaGGNia~~va~r~~~~~-- 191 (336)
T KOG1515|consen 121 ELNCVVV----SVDYRLAPE-HPFPAAYDDGWAALKWVLKNSWLKLGADP--SRVFLAGDSAGGNIAHVVAQRAADEK-- 191 (336)
T ss_pred HcCeEEE----ecCcccCCC-CCCCccchHHHHHHHHHHHhHHHHhCCCc--ccEEEEccCccHHHHHHHHHHHhhcc--
Confidence 4454443 344433321 22332222232334444444 66665443 34999999999999999999888753
Q ss_pred CCCCeeeeeeeeccCCCCCcc
Q 010909 204 GEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 204 ~~~~~inLkGi~iGng~~dp~ 224 (497)
...+.|+|.++.-|++...
T Consensus 192 --~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 192 --LSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred --CCCcceEEEEEEecccCCC
Confidence 1257899999998887654
No 66
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.38 E-value=0.08 Score=58.04 Aligned_cols=130 Identities=18% Similarity=0.142 Sum_probs=75.4
Q ss_pred CCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcc-cccceEeecCCCc
Q 010909 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT-KVSSIIYLDSPAG 136 (497)
Q Consensus 58 ~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~-~~anllfiDqPvG 136 (497)
.|..|+..++.... ....|+||.++|--..+.... +... ....-|. +-..++-+|.+ |
T Consensus 5 DG~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~-----~~~~--------------~~~~~l~~~Gy~vv~~D~R-G 63 (550)
T TIGR00976 5 DGTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRW-----GLDK--------------TEPAWFVAQGYAVVIQDTR-G 63 (550)
T ss_pred CCCEEEEEEEecCC-CCCCCEEEEecCCCCchhhcc-----cccc--------------ccHHHHHhCCcEEEEEecc-c
Confidence 36778766554332 346899999986432211100 0000 0001122 24679999988 9
Q ss_pred cccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeec
Q 010909 137 VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLV 216 (497)
Q Consensus 137 tGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~i 216 (497)
+|.|-+.... .+ .+.++|+.++|+ |+.+.|. .+.++.++|.||||.. +..+.... .-.|++++.
T Consensus 64 ~g~S~g~~~~---~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~----a~~~a~~~------~~~l~aiv~ 127 (550)
T TIGR00976 64 RGASEGEFDL---LG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVT----QLLAAVLQ------PPALRAIAP 127 (550)
T ss_pred cccCCCceEe---cC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHH----HHHHhccC------CCceeEEee
Confidence 9999653211 11 345566666665 5566653 4468999999999943 33333322 236999999
Q ss_pred cCCCCCcc
Q 010909 217 GNGVTDEE 224 (497)
Q Consensus 217 Gng~~dp~ 224 (497)
.+++.|..
T Consensus 128 ~~~~~d~~ 135 (550)
T TIGR00976 128 QEGVWDLY 135 (550)
T ss_pred cCcccchh
Confidence 99987754
No 67
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=95.12 E-value=0.025 Score=57.97 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=48.5
Q ss_pred cccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccC
Q 010909 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 203 (497)
Q Consensus 124 ~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~ 203 (497)
+...+|.+|.| |.|-|. . .. .+..+.|+++.++|... .+ .+.+.|+|+|+|| .+|..+..+.
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~--~-~~--~~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG----~vA~~~A~~~-- 159 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL--D-VP--IDTADQADAIALLLDAL-----GI-ARLHAFVGYSYGA----LVGLQFASRH-- 159 (343)
T ss_pred cccEEEEEeCC-CCCCCC--C-CC--CCHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHH----HHHHHHHHHC--
Confidence 45789999999 766552 1 11 23345677777776642 11 2346799999999 5555554432
Q ss_pred CCCCeeeeeeeeccCCCC
Q 010909 204 GEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 204 ~~~~~inLkGi~iGng~~ 221 (497)
+-.++++++.++..
T Consensus 160 ----P~~V~~LvLi~s~~ 173 (343)
T PRK08775 160 ----PARVRTLVVVSGAH 173 (343)
T ss_pred ----hHhhheEEEECccc
Confidence 23588899888754
No 68
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.07 E-value=0.024 Score=56.40 Aligned_cols=81 Identities=11% Similarity=0.034 Sum_probs=50.0
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
..|++.||-+.+..-.|.. ...+...+++++.++|+...+.. .+...+++|+|+|.||+.+-.+|.++-
T Consensus 66 ~~nVi~vD~~~~~~~~y~~----a~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~------ 134 (275)
T cd00707 66 DYNVIVVDWGRGANPNYPQ----AVNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLN------ 134 (275)
T ss_pred CCEEEEEECccccccChHH----HHHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhc------
Confidence 4799999987431111110 01233455677777777766543 233458999999999987777766431
Q ss_pred CCCeeeeeeeeccCCC
Q 010909 205 EKPVLNFKGYLVGNGV 220 (497)
Q Consensus 205 ~~~~inLkGi~iGng~ 220 (497)
-+++.|+..+|.
T Consensus 135 ----~~v~~iv~LDPa 146 (275)
T cd00707 135 ----GKLGRITGLDPA 146 (275)
T ss_pred ----CccceeEEecCC
Confidence 146777776654
No 69
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=94.91 E-value=0.059 Score=52.79 Aligned_cols=107 Identities=22% Similarity=0.366 Sum_probs=68.4
Q ss_pred CCCCEEEEeCCCCchhhHh-hHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCc
Q 010909 74 SKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGD 152 (497)
Q Consensus 74 ~~~PlvlWlnGGPG~SS~~-g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~ 152 (497)
..-|+++.+.|| |.|.|. ..|. ..+..+- .--++=+|-- |.|=+...+..+ -+.
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a----------------~el~s~~-----~~r~~a~DlR-gHGeTk~~~e~d--lS~ 126 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFA----------------SELKSKI-----RCRCLALDLR-GHGETKVENEDD--LSL 126 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHH----------------HHHHhhc-----ceeEEEeecc-ccCccccCChhh--cCH
Confidence 346999999998 888763 4432 1111111 0123668866 999887766554 356
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccC
Q 010909 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (497)
Q Consensus 153 ~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGn 218 (497)
+..++|+...++++|..-| .++.|+|||.|| +||.+-...+. --+|.|+.+.+
T Consensus 127 eT~~KD~~~~i~~~fge~~----~~iilVGHSmGG----aIav~~a~~k~-----lpsl~Gl~viD 179 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGELP----PQIILVGHSMGG----AIAVHTAASKT-----LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHHHHhccCC----CceEEEeccccc----hhhhhhhhhhh-----chhhhceEEEE
Confidence 6779999999998875443 369999999999 55543332221 23477777653
No 70
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.85 E-value=0.087 Score=59.76 Aligned_cols=145 Identities=20% Similarity=0.165 Sum_probs=85.0
Q ss_pred eEEEEEEecCCCCeeEEEEEEecCC--CCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCccc
Q 010909 47 HYSGYVTVDESHGRNLFYYFVESEG--NPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (497)
Q Consensus 47 ~~sGy~~v~~~~~~~lfy~f~~s~~--~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (497)
...+-+.+ .+...++++.-..+ +.+.-||+++.-|||+.-+..+ ...+.-|.+.+..
T Consensus 498 ~~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~------------------~~~~~~~~~~~s~ 556 (755)
T KOG2100|consen 498 VEFGKIEI---DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTS------------------KFSVDWNEVVVSS 556 (755)
T ss_pred ceeEEEEe---ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeee------------------eEEecHHHHhhcc
Confidence 34455554 25566666665442 2345699999999999332211 0223334444443
Q ss_pred c-cceEeecCCCccccccccCCCCcc--cCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcc
Q 010909 125 V-SSIIYLDSPAGVGLSYSENKTDYV--TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (497)
Q Consensus 125 ~-anllfiDqPvGtGfS~~~~~~~~~--~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~ 201 (497)
. +=++.|| +-|+|+.=..-..... -++. ..+|.....+.+.+.+ ..-...+.|+|-|||| +++..++...
T Consensus 557 ~g~~v~~vd-~RGs~~~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGG----y~t~~~l~~~ 629 (755)
T KOG2100|consen 557 RGFAVLQVD-GRGSGGYGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGG----YLTLKLLESD 629 (755)
T ss_pred CCeEEEEEc-CCCcCCcchhHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHH----HHHHHHhhhC
Confidence 2 4578888 6688875322111111 1222 2455666666666655 3333579999999999 8888888764
Q ss_pred cCCCCCeeeeeeeeccCCCCCcc
Q 010909 202 DAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 202 ~~~~~~~inLkGi~iGng~~dp~ 224 (497)
. .--+|.-+.-+|++|..
T Consensus 630 ~-----~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 630 P-----GDVFKCGVAVAPVTDWL 647 (755)
T ss_pred c-----CceEEEEEEecceeeee
Confidence 2 13466667778888765
No 71
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.82 E-value=0.027 Score=53.33 Aligned_cols=90 Identities=16% Similarity=0.103 Sum_probs=56.9
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
=..++.+|.+.+.||+..-........-....+|+.++++...++. ......+.|+|.||||+.+ ..+..+.
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a----~~~~~~~--- 85 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLA----LLAATQH--- 85 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHH----HHHHHHT---
T ss_pred CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEccccccccc----chhhccc---
Confidence 3578999999888877642222211223355777777776665544 5556789999999999544 4444322
Q ss_pred CCCeeeeeeeeccCCCCCccc
Q 010909 205 EKPVLNFKGYLVGNGVTDEEI 225 (497)
Q Consensus 205 ~~~~inLkGi~iGng~~dp~~ 225 (497)
.-.++.++.++|.+|+..
T Consensus 86 ---~~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 86 ---PDRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp ---CCGSSEEEEESE-SSTTC
T ss_pred ---ceeeeeeeccceecchhc
Confidence 124789999999998763
No 72
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.65 E-value=0.062 Score=54.84 Aligned_cols=60 Identities=30% Similarity=0.445 Sum_probs=51.2
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
+.+|||..|+.|.+++....+...++ ..| ..+..|.+|||.+..++|++....+.
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~------------------------~pn-~~~~~I~~~gH~~h~e~Pe~~~~~i~ 318 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK------------------------LPN-AELVEIPGAGHLPHLERPEEVAALLR 318 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh------------------------CCC-ceEEEeCCCCcccccCCHHHHHHHHH
Confidence 37899999999999998855554444 234 89999999999999999999999999
Q ss_pred HHHcC
Q 010909 490 RFLAG 494 (497)
Q Consensus 490 ~fl~g 494 (497)
.|+..
T Consensus 319 ~Fi~~ 323 (326)
T KOG1454|consen 319 SFIAR 323 (326)
T ss_pred HHHHH
Confidence 99865
No 73
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.61 E-value=0.29 Score=48.41 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=77.9
Q ss_pred CCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCC-----CCccc
Q 010909 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENK-----TDYVT 150 (497)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~-----~~~~~ 150 (497)
+++++|+-|=||....+--|.+ .|..+- +....++=|. =.|+|..... +.-..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~----------------~L~~~l---~~~~~i~~is---h~Gh~~~~~~~~~~~~~~~~ 59 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLS----------------ALYEKL---NPQFEILGIS---HAGHSTSPSNSKFSPNGRLF 59 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHH----------------HHHHhC---CCCCeeEEec---CCCCcCCcccccccCCCCcc
Confidence 6899999999999987655541 122221 3334444444 2344443332 12234
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
+-++.-+.-.+||+++....+ ..+.+++|.|+|=|. +++.+|+++.. ....+++++++.=|.+.-
T Consensus 60 sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~---~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 60 SLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP---DLKFRVKKVILLFPTIED 124 (266)
T ss_pred CHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc---ccCCceeEEEEeCCcccc
Confidence 666777888999999888764 235689999999999 99999998763 124677777766666543
No 74
>PRK10115 protease 2; Provisional
Probab=94.53 E-value=0.098 Score=58.87 Aligned_cols=142 Identities=13% Similarity=0.043 Sum_probs=76.2
Q ss_pred EEecCCCCeeEEEEEEecC--CCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCccccc-ce
Q 010909 52 VTVDESHGRNLFYYFVESE--GNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS-SI 128 (497)
Q Consensus 52 ~~v~~~~~~~lfy~f~~s~--~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~a-nl 128 (497)
+.+....|..+-.|++-.. ......|++|+..||||.|...++..+. .+|.... -+
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~---------------------~~l~~rG~~v 477 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSR---------------------LSLLDRGFVY 477 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHH---------------------HHHHHCCcEE
Confidence 3343344666665544322 1234569999999999998432221111 1222221 22
Q ss_pred EeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCe
Q 010909 129 IYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPV 208 (497)
Q Consensus 129 lfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~ 208 (497)
++..--=|+||-..=...+....-...-+|+.+..+... ...--....+.|.|-|||| .++..++.+. +
T Consensus 478 ~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG----~l~~~~~~~~------P 546 (686)
T PRK10115 478 AIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGG----MLMGVAINQR------P 546 (686)
T ss_pred EEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHH----HHHHHHHhcC------h
Confidence 333323344444311110000111134566666665443 3333344689999999999 6666665432 1
Q ss_pred eeeeeeeccCCCCCccc
Q 010909 209 LNFKGYLVGNGVTDEEI 225 (497)
Q Consensus 209 inLkGi~iGng~~dp~~ 225 (497)
=.++.++.+.|++|...
T Consensus 547 dlf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 547 ELFHGVIAQVPFVDVVT 563 (686)
T ss_pred hheeEEEecCCchhHhh
Confidence 25999999999999763
No 75
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=93.69 E-value=0.24 Score=52.44 Aligned_cols=81 Identities=9% Similarity=-0.036 Sum_probs=50.7
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
..|+|-+|-| |-|-|.-... ..+...+|+++.++|+...+.. .+.-.+++|.|+|.||+.+-.+|.+.
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a---~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~------- 140 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTS---AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT------- 140 (442)
T ss_pred CCEEEEEECC-CcCCCCCccc---cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC-------
Confidence 3699999998 5453321111 1233567788888877654443 24446899999999998766665432
Q ss_pred CCCeeeeeeeeccCCC
Q 010909 205 EKPVLNFKGYLVGNGV 220 (497)
Q Consensus 205 ~~~~inLkGi~iGng~ 220 (497)
+-.|..|++.+|.
T Consensus 141 ---p~rV~rItgLDPA 153 (442)
T TIGR03230 141 ---KHKVNRITGLDPA 153 (442)
T ss_pred ---CcceeEEEEEcCC
Confidence 1236667766663
No 76
>PRK10162 acetyl esterase; Provisional
Probab=93.60 E-value=0.2 Score=50.86 Aligned_cols=63 Identities=14% Similarity=0.045 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 156 a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
+.+.+++|.+..+++. ....++.|+|+|.||+.+-.++..+.+... ....++++++..|++|.
T Consensus 135 ~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 135 IVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 3444555554444431 234689999999999888888776654321 12457888888888764
No 77
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=93.49 E-value=0.31 Score=46.32 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=51.9
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCC
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 205 (497)
.++..|+.| |-+ .......+-++.|+...+.|++ ..|+ -|++|+|.|+||..+=.+|++|.++.
T Consensus 28 ~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~I~~---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G---- 91 (229)
T PF00975_consen 28 IGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEAIRA---RQPE---GPYVLAGWSFGGILAFEMARQLEEAG---- 91 (229)
T ss_dssp EEEEEECST-TSC-----TTSHEESSHHHHHHHHHHHHHH---HTSS---SSEEEEEETHHHHHHHHHHHHHHHTT----
T ss_pred EEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHHhhh---hCCC---CCeeehccCccHHHHHHHHHHHHHhh----
Confidence 468888877 554 1122234566777776666653 4442 39999999999988888887777653
Q ss_pred CCeeeeeeeeccCCCC
Q 010909 206 KPVLNFKGYLVGNGVT 221 (497)
Q Consensus 206 ~~~inLkGi~iGng~~ 221 (497)
.....+++.++..
T Consensus 92 ---~~v~~l~liD~~~ 104 (229)
T PF00975_consen 92 ---EEVSRLILIDSPP 104 (229)
T ss_dssp ----SESEEEEESCSS
T ss_pred ---hccCceEEecCCC
Confidence 4678888888653
No 78
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=93.46 E-value=0.16 Score=52.06 Aligned_cols=63 Identities=17% Similarity=0.193 Sum_probs=49.9
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEc-CceecCCCCCcHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIK-GAGHTVPEYKPREALDFY 488 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~-~AGHmVP~DqP~~a~~m~ 488 (497)
.++||+..|+.|.+++....+...+.+. ...-..+|+.|. +|||+++.++|+...+.+
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~---------------------~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP---------------------AAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh---------------------hcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 6899999999999999988777666542 011114566664 899999999999999999
Q ss_pred HHHHc
Q 010909 489 SRFLA 493 (497)
Q Consensus 489 ~~fl~ 493 (497)
.+||.
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99984
No 79
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=93.00 E-value=0.25 Score=51.71 Aligned_cols=66 Identities=12% Similarity=0.043 Sum_probs=52.6
Q ss_pred hcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcC-ceecCCCCCcHHHHH
Q 010909 408 LRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKG-AGHTVPEYKPREALD 486 (497)
Q Consensus 408 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~-AGHmVP~DqP~~a~~ 486 (497)
.-..+||+..|+.|.+++..-.+...+.+. ..+.+.+++.|.+ +||+.+.++|+....
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp---------------------~~~~~a~l~~I~s~~GH~~~le~p~~~~~ 379 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQ---------------------KQGKYAEVYEIESINGHMAGVFDIHLFEK 379 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhh---------------------hcCCCeEEEEECCCCCcchhhcCHHHHHH
Confidence 337899999999999999876666555542 0112378889985 999999999999999
Q ss_pred HHHHHHcC
Q 010909 487 FYSRFLAG 494 (497)
Q Consensus 487 m~~~fl~g 494 (497)
.+.+|+..
T Consensus 380 ~I~~FL~~ 387 (389)
T PRK06765 380 KIYEFLNR 387 (389)
T ss_pred HHHHHHcc
Confidence 99999965
No 80
>PLN00021 chlorophyllase
Probab=92.75 E-value=0.33 Score=49.27 Aligned_cols=116 Identities=20% Similarity=0.167 Sum_probs=62.0
Q ss_pred CCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCc
Q 010909 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGD 152 (497)
Q Consensus 73 ~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~ 152 (497)
..+.|+||++.|+.+....+..+.+ .+. +| -..++.+|-+ | ++.... ..+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~----------------~La----s~--G~~VvapD~~-g--~~~~~~-----~~~ 98 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQ----------------HIA----SH--GFIVVAPQLY-T--LAGPDG-----TDE 98 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHH----------------HHH----hC--CCEEEEecCC-C--cCCCCc-----hhh
Confidence 3568999999999766543321110 010 11 1245555644 2 221110 122
Q ss_pred HHHHHHHHHHHHHHHHH-CC---CCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 153 LKTASDTHTFLLKWFEL-YP---EFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 153 ~~~a~d~~~fL~~F~~~-~p---~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
.+.+.++.+++.+-++. .| +....+++|+|+|.||..+-.+|.+..+.. ....+++++..+++...
T Consensus 99 i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 99 IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeecccccc
Confidence 23455666666654432 12 233357999999999966555554332111 13568888888887543
No 81
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=92.61 E-value=2.5 Score=46.04 Aligned_cols=84 Identities=10% Similarity=-0.090 Sum_probs=50.1
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHH-HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKT-ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~-a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
..++=||-+ |.|.|.... +.++. .+.+.++|..+.+.. ...++.++|+|.||..+...+..+.....
T Consensus 221 f~V~~iDwr-gpg~s~~~~------~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~-- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADK------TFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD-- 288 (532)
T ss_pred cEEEEEECC-CCCcccccC------ChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC--
Confidence 467778866 777764321 12223 344666676666544 34689999999999765442222222110
Q ss_pred CCCeeeeeeeeccCCCCCcc
Q 010909 205 EKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 205 ~~~~inLkGi~iGng~~dp~ 224 (497)
.-.++++++.+..+|..
T Consensus 289 ---~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 ---DKRIKSATFFTTLLDFS 305 (532)
T ss_pred ---CCccceEEEEecCcCCC
Confidence 12478888888888764
No 82
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=92.26 E-value=0.2 Score=47.81 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=42.7
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
-.++|+++.|+.|.++... .+ .. + .+++.|.++||+++.++|++..+.+
T Consensus 187 i~~P~lii~G~~D~~~~~~-----~~------------------------~~-~-~~~~~i~~~gH~~~~e~p~~~~~~i 235 (242)
T PRK11126 187 LTFPFYYLCGERDSKFQAL-----AQ------------------------QL-A-LPLHVIPNAGHNAHRENPAAFAASL 235 (242)
T ss_pred cCCCeEEEEeCCcchHHHH-----HH------------------------Hh-c-CeEEEeCCCCCchhhhChHHHHHHH
Confidence 3689999999999754210 00 01 2 6788899999999999999999999
Q ss_pred HHHHc
Q 010909 489 SRFLA 493 (497)
Q Consensus 489 ~~fl~ 493 (497)
..|+.
T Consensus 236 ~~fl~ 240 (242)
T PRK11126 236 AQILR 240 (242)
T ss_pred HHHHh
Confidence 99984
No 83
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=92.26 E-value=1.3 Score=45.48 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=66.4
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhh-cCCeeeeCCCCCCCCCcccccCCCc-ccccceEeecCCCc
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYE-HGPFNFEAPTTKGSLPKLHVNPYSW-TKVSSIIYLDSPAG 136 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E-~GP~~~~~~~~~~~~~~l~~n~~sW-~~~anllfiDqPvG 136 (497)
+..++|.-+...+ ....|.||.++|=.|.+....- .+ ..|=.+.. +..-.... .+...||-+|.| |
T Consensus 15 ~~~~~y~~~g~~~-~~~~~~vll~Hg~~~~~~~~~~-~~~~~~~~w~~---------~~~~~~~l~~~~~~vi~~D~~-G 82 (351)
T TIGR01392 15 DVRVAYETYGTLN-AERSNAVLVCHALTGDAHVAGY-HDDGDPGWWDD---------LIGPGRAIDTDRYFVVCSNVL-G 82 (351)
T ss_pred CceEEEEeccccC-CCCCCEEEEcCCcCcchhhccc-CCCCCCCchhh---------ccCCCCCcCCCceEEEEecCC-C
Confidence 5678876553211 1345889999988775533100 00 00000000 00000001 234589999999 7
Q ss_pred --cccccccC--CCC--c-----ccCcHHHHHHHHHHHHHHHHHCCCCCCCC-EEEEeeccccccHHHHHHHHHhcccCC
Q 010909 137 --VGLSYSEN--KTD--Y-----VTGDLKTASDTHTFLLKWFELYPEFLANP-FFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 137 --tGfS~~~~--~~~--~-----~~~~~~~a~d~~~fL~~F~~~~p~~~~~~-~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
.|-|-..+ +.+ + ..+-++.++++.++++ .. .-.+ +.|+|+|+|| .+|..+....
T Consensus 83 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l---~~~~~~~l~G~S~Gg----~ia~~~a~~~--- 148 (351)
T TIGR01392 83 GCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLD----HL---GIEQIAAVVGGSMGG----MQALEWAIDY--- 148 (351)
T ss_pred CCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH----Hc---CCCCceEEEEECHHH----HHHHHHHHHC---
Confidence 45432111 011 0 1233344555555554 32 2235 9999999999 4444443332
Q ss_pred CCCeeeeeeeeccCCCC
Q 010909 205 EKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 205 ~~~~inLkGi~iGng~~ 221 (497)
+-.++++++.++..
T Consensus 149 ---p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 149 ---PERVRAIVVLATSA 162 (351)
T ss_pred ---hHhhheEEEEccCC
Confidence 23588888887654
No 84
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.13 E-value=1.2 Score=46.44 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=78.5
Q ss_pred CeeEEEEEEecCC----CCCCCCEEEEeCCCCchhhH------hhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccce
Q 010909 59 GRNLFYYFVESEG----NPSKDPVVLWLNGGPGCSSF------DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSI 128 (497)
Q Consensus 59 ~~~lfy~f~~s~~----~~~~~PlvlWlnGGPG~SS~------~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 128 (497)
|.-..=|+..... +..++|+++.|-|=.|.|.- .....+.| ++.- +.
T Consensus 104 G~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~V-----------Vf----------- 160 (409)
T KOG1838|consen 104 GTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRVV-----------VF----------- 160 (409)
T ss_pred CEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEEE-----------EE-----------
Confidence 3334446654332 24578999999999999853 33455566 4322 11
Q ss_pred EeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCe
Q 010909 129 IYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPV 208 (497)
Q Consensus 129 lfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~ 208 (497)
.+-|-|-|--+++.-+.....+. +-++++---++||+ .++|.+|.|+||. .+.+++-+..++ .
T Consensus 161 ----N~RG~~g~~LtTpr~f~ag~t~D---l~~~v~~i~~~~P~---a~l~avG~S~Gg~---iL~nYLGE~g~~----~ 223 (409)
T KOG1838|consen 161 ----NHRGLGGSKLTTPRLFTAGWTED---LREVVNHIKKRYPQ---APLFAVGFSMGGN---ILTNYLGEEGDN----T 223 (409)
T ss_pred ----CCCCCCCCccCCCceeecCCHHH---HHHHHHHHHHhCCC---CceEEEEecchHH---HHHHHhhhccCC----C
Confidence 14488888777777666555444 44444444467885 5999999999995 567777665432 1
Q ss_pred eeeeeeeccCCCC
Q 010909 209 LNFKGYLVGNGVT 221 (497)
Q Consensus 209 inLkGi~iGng~~ 221 (497)
--..|++|-|||-
T Consensus 224 ~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 224 PLIAAVAVCNPWD 236 (409)
T ss_pred CceeEEEEeccch
Confidence 2367888888883
No 85
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=90.99 E-value=1.3 Score=42.49 Aligned_cols=26 Identities=23% Similarity=0.470 Sum_probs=21.4
Q ss_pred CceEEEEecCCccccCchhHHHHHhh
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRS 435 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~ 435 (497)
+++++|++|+.|..|+....++.++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 46788999999999999887776654
No 86
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=90.88 E-value=0.14 Score=53.33 Aligned_cols=79 Identities=20% Similarity=0.188 Sum_probs=50.7
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCC
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 205 (497)
-+||=||-| |||+|.... +. +....+...+-.++...|+.-...+.++|-|+||.|++.+|.- +
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~----~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l--e------ 282 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LT----QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL--E------ 282 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S-----S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH--T------
T ss_pred CEEEEEccC-CCcccccCC---CC----cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh--c------
Confidence 378999999 999985321 11 1123456667777888999888899999999999888777642 1
Q ss_pred CCeeeeeeeeccCCCCC
Q 010909 206 KPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 206 ~~~inLkGi~iGng~~d 222 (497)
.-.||+++.-.|.++
T Consensus 283 --~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 283 --DPRLKAVVALGAPVH 297 (411)
T ss_dssp --TTT-SEEEEES---S
T ss_pred --ccceeeEeeeCchHh
Confidence 135888766666554
No 87
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=90.88 E-value=0.81 Score=38.31 Aligned_cols=60 Identities=23% Similarity=0.356 Sum_probs=49.2
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
..+||+.++..|.++|+.+.++..+.|. + =..|++.++||-+-...-.-+.+++.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~------------------------~-s~lvt~~g~gHg~~~~~s~C~~~~v~ 88 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP------------------------G-SRLVTVDGAGHGVYAGGSPCVDKAVD 88 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC------------------------C-ceEEEEeccCcceecCCChHHHHHHH
Confidence 3899999999999999999999988864 2 45799999999998644456677887
Q ss_pred HHHcC
Q 010909 490 RFLAG 494 (497)
Q Consensus 490 ~fl~g 494 (497)
+||..
T Consensus 89 ~yl~~ 93 (103)
T PF08386_consen 89 DYLLD 93 (103)
T ss_pred HHHHc
Confidence 77753
No 88
>PRK11460 putative hydrolase; Provisional
Probab=90.75 E-value=2.2 Score=41.18 Aligned_cols=34 Identities=15% Similarity=0.025 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHH
Q 010909 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPT 192 (497)
Q Consensus 158 d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~ 192 (497)
.+.++++.+.++. .....+++|.|.|.||..+-.
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~ 119 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALE 119 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHH
Confidence 3444554444333 344568999999999954433
No 89
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=90.38 E-value=0.64 Score=40.31 Aligned_cols=94 Identities=20% Similarity=0.192 Sum_probs=54.9
Q ss_pred EEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHH
Q 010909 78 VVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTAS 157 (497)
Q Consensus 78 lvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~ 157 (497)
+||+++|+-|.+..+..+.+ .+ .. +-.+++.+|.| +.|-+.. ...++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~----~l------------~~------~G~~v~~~~~~-~~~~~~~----------~~~~~ 47 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAE----AL------------AE------QGYAVVAFDYP-GHGDSDG----------ADAVE 47 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHH----HH------------HH------TTEEEEEESCT-TSTTSHH----------SHHHH
T ss_pred CEEEECCCCCCHHHHHHHHH----HH------------HH------CCCEEEEEecC-CCCccch----------hHHHH
Confidence 58999999776555433322 11 11 12467778877 6665411 12333
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCC
Q 010909 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (497)
Q Consensus 158 d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~ 220 (497)
++++.+. +..+ ..++++|+|.|.||..+..++. .+ ..++++++-+|+
T Consensus 48 ~~~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~----~~-------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 48 RVLADIR---AGYP--DPDRIILIGHSMGGAIAANLAA----RN-------PRVKAVVLLSPY 94 (145)
T ss_dssp HHHHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHH----HS-------TTESEEEEESES
T ss_pred HHHHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhh----hc-------cceeEEEEecCc
Confidence 3333332 3333 4579999999999965555444 22 357888888885
No 90
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.20 E-value=1.5 Score=47.82 Aligned_cols=108 Identities=26% Similarity=0.389 Sum_probs=69.0
Q ss_pred CCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCccccc----------ceEeecCCCcccccccc
Q 010909 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS----------SIIYLDSPAGVGLSYSE 143 (497)
Q Consensus 74 ~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~a----------nllfiDqPvGtGfS~~~ 143 (497)
+.-|+++.+-||||. .++.|.++|.+.. =|++||.- |+
T Consensus 640 kkYptvl~VYGGP~V-------------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS------ 687 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV-------------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GS------ 687 (867)
T ss_pred CCCceEEEEcCCCce-------------------------EEeeccccceehhhhhhhhhcceEEEEEcCC-Cc------
Confidence 357999999999986 3677777777642 25899955 32
Q ss_pred CCCCcc--------cCcHHHHHHHHHHHHHHHHHCCCCCC-CCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeee
Q 010909 144 NKTDYV--------TGDLKTASDTHTFLLKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGY 214 (497)
Q Consensus 144 ~~~~~~--------~~~~~~a~d~~~fL~~F~~~~p~~~~-~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi 214 (497)
-..+.. .+..+ ++|=.+.||-..++.- |.+ ..+-|-|-|||| +|+...+.+- |+| ++-.
T Consensus 688 ~hRGlkFE~~ik~kmGqVE-~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGG----YLSlm~L~~~-----P~I-frvA 755 (867)
T KOG2281|consen 688 AHRGLKFESHIKKKMGQVE-VEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGG----YLSLMGLAQY-----PNI-FRVA 755 (867)
T ss_pred cccchhhHHHHhhccCeee-ehhhHHHHHHHHHhcC-cccchheeEecccccc----HHHHHHhhcC-----cce-eeEE
Confidence 111111 12222 2333455554444443 333 369999999999 8887777653 233 7777
Q ss_pred eccCCCCCccc
Q 010909 215 LVGNGVTDEEI 225 (497)
Q Consensus 215 ~iGng~~dp~~ 225 (497)
+-|.|+++...
T Consensus 756 IAGapVT~W~~ 766 (867)
T KOG2281|consen 756 IAGAPVTDWRL 766 (867)
T ss_pred eccCcceeeee
Confidence 88999998864
No 91
>PLN02454 triacylglycerol lipase
Probab=89.39 E-value=1 Score=47.16 Aligned_cols=68 Identities=12% Similarity=0.164 Sum_probs=50.0
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCC
Q 010909 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 152 ~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~d 222 (497)
...+.+++...|++..+++|..+ ..++++|||-||-.+-..|..|...... ...+++..+..|.|-+.
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVG 272 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCccc
Confidence 34678889999999999998753 3699999999997777777777654211 12345677888877764
No 92
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=89.05 E-value=1.9 Score=46.28 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccH
Q 010909 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYV 190 (497)
Q Consensus 156 a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yv 190 (497)
....++++++-...|. -..+++.|+|+|.||+-+
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~ 190 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASV 190 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHh
Confidence 4445677777777774 345689999999999544
No 93
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=88.99 E-value=1.9 Score=41.04 Aligned_cols=131 Identities=18% Similarity=0.198 Sum_probs=78.9
Q ss_pred EEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEe
Q 010909 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (497)
Q Consensus 51 y~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (497)
-|.+.......+.=|...+++ .+|.+|+|.|--|- +|.+. .... .... +=.-||+-
T Consensus 56 ~i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh~NAGN---mGhr~------~i~~-------~fy~-----~l~mnv~i 111 (300)
T KOG4391|consen 56 RIELRTRDKVTLDAYLMLSES---SRPTLLYFHANAGN---MGHRL------PIAR-------VFYV-----NLKMNVLI 111 (300)
T ss_pred EEEEEcCcceeEeeeeecccC---CCceEEEEccCCCc---ccchh------hHHH-------HHHH-----HcCceEEE
Confidence 344544345566544444443 79999999977554 22222 1100 0011 22358899
Q ss_pred ecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeee
Q 010909 131 LDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN 210 (497)
Q Consensus 131 iDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~in 210 (497)
+|-- |-|-|.+.....--.-|.+++ ..++-.+|.+.+.++.++|.|-||--+-.+| ..+ .-.
T Consensus 112 vsYR-GYG~S~GspsE~GL~lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAvai~la----sk~------~~r 173 (300)
T KOG4391|consen 112 VSYR-GYGKSEGSPSEEGLKLDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLA----SKN------SDR 173 (300)
T ss_pred EEee-ccccCCCCccccceeccHHHH-------HHHHhcCccCCcceEEEEecccCCeeEEEee----ccc------hhh
Confidence 9977 888887755432112333332 3445678888889999999999994444444 333 347
Q ss_pred eeeeeccCCCCCc
Q 010909 211 FKGYLVGNGVTDE 223 (497)
Q Consensus 211 LkGi~iGng~~dp 223 (497)
+.++++-|-+++=
T Consensus 174 i~~~ivENTF~SI 186 (300)
T KOG4391|consen 174 ISAIIVENTFLSI 186 (300)
T ss_pred eeeeeeechhccc
Confidence 8999999988764
No 94
>PRK11071 esterase YqiA; Provisional
Probab=88.02 E-value=1.9 Score=40.20 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=42.6
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
...+|+|.+|+.|-++|+.-+.+..++ ...+.+.||+|.. ...+..+..+
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~----------------------------~~~~~~~ggdH~f--~~~~~~~~~i 184 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA----------------------------CRQTVEEGGNHAF--VGFERYFNQI 184 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh----------------------------cceEEECCCCcch--hhHHHhHHHH
Confidence 356899999999999999977665542 2345679999998 3348899999
Q ss_pred HHHHc
Q 010909 489 SRFLA 493 (497)
Q Consensus 489 ~~fl~ 493 (497)
..|+.
T Consensus 185 ~~fl~ 189 (190)
T PRK11071 185 VDFLG 189 (190)
T ss_pred HHHhc
Confidence 98874
No 95
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=86.73 E-value=0.99 Score=42.07 Aligned_cols=78 Identities=21% Similarity=0.102 Sum_probs=50.5
Q ss_pred ceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCC
Q 010909 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (497)
Q Consensus 127 nllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 206 (497)
+++-+|+| |.|+|... .......-..+++.+.+..++++.+ ..++++.|+||||. ++.......
T Consensus 2 ~vi~~d~r-G~g~S~~~---~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~----~~~~~a~~~----- 65 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPH---WDPDFPDYTTDDLAADLEALREALG---IKKINLVGHSMGGM----LALEYAAQY----- 65 (230)
T ss_dssp EEEEEECT-TSTTSSSC---CGSGSCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHH----HHHHHHHHS-----
T ss_pred EEEEEeCC-CCCCCCCC---ccCCcccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChH----HHHHHHHHC-----
Confidence 57889988 99999741 0001222335566666667666654 24599999999994 444444433
Q ss_pred CeeeeeeeeccCCCC
Q 010909 207 PVLNFKGYLVGNGVT 221 (497)
Q Consensus 207 ~~inLkGi~iGng~~ 221 (497)
+-.++++++.++..
T Consensus 66 -p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 66 -PERVKKLVLISPPP 79 (230)
T ss_dssp -GGGEEEEEEESESS
T ss_pred -chhhcCcEEEeeec
Confidence 12789998888763
No 96
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=86.68 E-value=5.1 Score=40.20 Aligned_cols=46 Identities=15% Similarity=0.023 Sum_probs=37.6
Q ss_pred CCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCccc
Q 010909 174 LANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (497)
Q Consensus 174 ~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~ 225 (497)
..+++.|+|+|=||+.+..++....+.. ...+++.++..|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 3568999999999999888888877652 356888899999999875
No 97
>PRK11460 putative hydrolase; Provisional
Probab=86.38 E-value=0.9 Score=43.82 Aligned_cols=62 Identities=15% Similarity=0.129 Sum_probs=47.5
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
..+|++.+|..|.+++..-.++..+.|+ -. +...++.++.++||.+..+.-+.+.+.+.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~---------------~~------g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALI---------------SL------GGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHH---------------HC------CCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 6899999999999999998888887764 01 12377888899999997655566666665
Q ss_pred HHH
Q 010909 490 RFL 492 (497)
Q Consensus 490 ~fl 492 (497)
+++
T Consensus 207 ~~l 209 (232)
T PRK11460 207 YTV 209 (232)
T ss_pred HHc
Confidence 555
No 98
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=86.03 E-value=1.9 Score=37.52 Aligned_cols=62 Identities=21% Similarity=0.221 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
...+.+.+.|++..+++| +..+.|+|||-||-.+..++..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccc
Confidence 445677788888888887 35899999999999888888888775421 135677777777665
No 99
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=85.19 E-value=1.2 Score=41.72 Aligned_cols=63 Identities=16% Similarity=0.091 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHH---CCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 154 KTASDTHTFLLKWFEL---YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~---~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
+..+|+.++++-..+. + .+...+++|+|+|=||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccc
Confidence 3444555544433332 2 244568999999999999999998877653 1349999999999876
No 100
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=84.90 E-value=1.7 Score=40.80 Aligned_cols=63 Identities=21% Similarity=0.246 Sum_probs=44.6
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCc-HHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKP-REALDF 487 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP-~~a~~m 487 (497)
...+|||.+|+.|.+|+..-++.+.++|.-. +....++++.++||-...++. ......
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~---------------------g~~~~~~~~p~~gH~~~~~~~~~~~~~~ 201 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA---------------------GKPVELLIFPGEGHGFGNPENRRDWYER 201 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT---------------------TSSEEEEEETT-SSSTTSHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc---------------------CCCEEEEEcCcCCCCCCCchhHHHHHHH
Confidence 4699999999999999999999999998611 123889999999995553332 233334
Q ss_pred HHHHH
Q 010909 488 YSRFL 492 (497)
Q Consensus 488 ~~~fl 492 (497)
+.+|+
T Consensus 202 ~~~f~ 206 (213)
T PF00326_consen 202 ILDFF 206 (213)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 101
>PRK10566 esterase; Provisional
Probab=84.73 E-value=1.2 Score=42.77 Aligned_cols=107 Identities=14% Similarity=0.145 Sum_probs=58.0
Q ss_pred EEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccc
Q 010909 63 FYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYS 142 (497)
Q Consensus 63 fy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~ 142 (497)
++-+++....+...|+||.+.|++|.......+. ..+.. +-.+++.+|.| |.|-|+.
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~----------------~~l~~------~G~~v~~~d~~-g~G~~~~ 70 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFA----------------VALAQ------AGFRVIMPDAP-MHGARFS 70 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHH----------------HHHHh------CCCEEEEecCC-cccccCC
Confidence 4444454333345799999999988764322110 01111 12478889988 7776543
Q ss_pred cCCCCccc---C-cHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHH
Q 010909 143 ENKTDYVT---G-DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTL 193 (497)
Q Consensus 143 ~~~~~~~~---~-~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~l 193 (497)
........ . .....+++.+++ .++...+.....++.|+|+|+||..+-.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~ 124 (249)
T PRK10566 71 GDEARRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGI 124 (249)
T ss_pred CccccchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHH
Confidence 21110000 0 012334444444 34444544556789999999999554433
No 102
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=84.43 E-value=4.4 Score=38.33 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 156 a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
++.+.++|.+..+.. ...++++|.|-|-|| .+|..+.-.. +-.+.|++.-+|++-+
T Consensus 87 ~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa----~~al~~~l~~------p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 87 AERLDELIDEEVAYG--IDPSRIFLGGFSQGA----AMALYLALRY------PEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHHHHTT----GGGEEEEEETHHH----HHHHHHHHCT------SSTSSEEEEES---TT
T ss_pred HHHHHHHHHHHHHcC--CChhheehhhhhhHH----HHHHHHHHHc------CcCcCEEEEeeccccc
Confidence 444555555444332 455789999999999 5665555433 2368899998888743
No 103
>PRK05855 short chain dehydrogenase; Validated
Probab=84.18 E-value=1.2 Score=48.63 Aligned_cols=59 Identities=19% Similarity=0.124 Sum_probs=44.1
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
.+++||.+|+.|.+++....+.+.+. .. +..++.+ ++||+++.+.|++..+.+.
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~------------------------~~-~~~~~~~-~~gH~~~~e~p~~~~~~i~ 286 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRW------------------------VP-RLWRREI-KAGHWLPMSHPQVLAAAVA 286 (582)
T ss_pred cCceEEEEeCCCcccCHHHhcccccc------------------------CC-cceEEEc-cCCCcchhhChhHHHHHHH
Confidence 58999999999999996543322111 11 2455555 5799999999999999999
Q ss_pred HHHcC
Q 010909 490 RFLAG 494 (497)
Q Consensus 490 ~fl~g 494 (497)
+|+..
T Consensus 287 ~fl~~ 291 (582)
T PRK05855 287 EFVDA 291 (582)
T ss_pred HHHHh
Confidence 99864
No 104
>PLN02571 triacylglycerol lipase
Probab=83.23 E-value=3.6 Score=43.12 Aligned_cols=69 Identities=9% Similarity=0.043 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccC----CCCCeeeeeeeeccCCCCC
Q 010909 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA----GEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 153 ~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~----~~~~~inLkGi~iGng~~d 222 (497)
..+.+++++.|+++.+++|.. ..+++++|||-||-.+-..|..|....-. .....+++..+..|.|-+-
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 456788999999999998864 34799999999998887777777653110 0111345667777777664
No 105
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=82.87 E-value=2.4 Score=44.15 Aligned_cols=60 Identities=22% Similarity=0.279 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCC-CCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 155 TASDTHTFLLKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 155 ~a~d~~~fL~~F~~~~p~~~~-~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
.|.|...+|..-.+.+|.... .|+.+.|.|||| |...|+.+|. +-.+.||+=-++++-|.
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccch
Confidence 488899999888889999885 799999999999 4444444442 23466666666666554
No 106
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.78 E-value=3.8 Score=36.44 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhc
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (497)
..++.+...+++..+++|. .+++|+|+|-||..+-.+|..+..+
T Consensus 9 ~~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 3445555666666666664 5899999999998888888887654
No 107
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.72 E-value=3 Score=39.91 Aligned_cols=60 Identities=18% Similarity=0.237 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCC
Q 010909 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 155 ~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~d 222 (497)
..+++...+.+..+++|. .+++++|||-||-.+..+|..|.++. ...+++.+..|.|-+-
T Consensus 110 ~~~~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 110 LYNQVLPELKSALKQYPD---YKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 344555666666666664 47999999999988887777776543 1346888888887763
No 108
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=82.20 E-value=2.6 Score=48.19 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=53.6
Q ss_pred cccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHH----HH-------HCCCCCCCCEEEEeeccccccHHH
Q 010909 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKW----FE-------LYPEFLANPFFIAGESYAGIYVPT 192 (497)
Q Consensus 124 ~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F----~~-------~~p~~~~~~~yi~GESYgG~yvP~ 192 (497)
+=..+|++|.+ |+|-|-+.-.. ....+.+...++.++|..- .. +- .+.+-++-++|.|||| +
T Consensus 278 rGYaVV~~D~R-Gtg~SeG~~~~-~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq-~WsnGkVGm~G~SY~G----~ 350 (767)
T PRK05371 278 RGFAVVYVSGI-GTRGSDGCPTT-GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKA-DWSNGKVAMTGKSYLG----T 350 (767)
T ss_pred CCeEEEEEcCC-CCCCCCCcCcc-CCHHHHHHHHHHHHHHhhCCcccccccccccccc-CCCCCeeEEEEEcHHH----H
Confidence 34789999977 99999775322 1123444455555555421 11 11 1335689999999999 4
Q ss_pred HHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 193 LAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 193 la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
++..+.... .-.||.|+...|+.|.
T Consensus 351 ~~~~aAa~~------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 351 LPNAVATTG------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHhhC------CCcceEEEeeCCCCcH
Confidence 444443322 2469999988888764
No 109
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=81.24 E-value=5 Score=42.46 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=45.1
Q ss_pred cCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcccc
Q 010909 150 TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEID 226 (497)
Q Consensus 150 ~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~q 226 (497)
-+.+|+-.|+..|++.+-.++....+.|+.++|-|||| .||..+-..- |. -+.|..--++.+....+
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G----~Laaw~r~ky-----P~-~~~ga~ASSapv~a~~d 153 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGG----ALAAWFRLKY-----PH-LFDGAWASSAPVQAKVD 153 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHH----HHHHHHHHH------TT-T-SEEEEET--CCHCCT
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchh----HHHHHHHhhC-----CC-eeEEEEeccceeeeecc
Confidence 47779999999999998888866667899999999999 7777664432 11 25566666666665443
No 110
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=81.16 E-value=3.1 Score=41.03 Aligned_cols=83 Identities=20% Similarity=0.191 Sum_probs=51.7
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCC
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 205 (497)
..+|.+|.. |+|-|.+.-... ..+.++|.++.| +|+...| +.+-++-++|-||+|.....+|. .+
T Consensus 58 Y~vV~~D~R-G~g~S~G~~~~~----~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~----~~---- 122 (272)
T PF02129_consen 58 YAVVVQDVR-GTGGSEGEFDPM----SPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAA----RR---- 122 (272)
T ss_dssp -EEEEEE-T-TSTTS-S-B-TT----SHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHT----TT----
T ss_pred CEEEEECCc-ccccCCCccccC----ChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHh----cC----
Confidence 468889966 999998754321 334455555444 4566665 44447999999999966555443 22
Q ss_pred CCeeeeeeeeccCCCCCccc
Q 010909 206 KPVLNFKGYLVGNGVTDEEI 225 (497)
Q Consensus 206 ~~~inLkGi~iGng~~dp~~ 225 (497)
.-.||.|+...+..|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 346999999988887653
No 111
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=81.02 E-value=4.8 Score=41.02 Aligned_cols=64 Identities=19% Similarity=0.260 Sum_probs=40.6
Q ss_pred cccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCC-CCCCCEEEEeeccccccHHHHHHHHHh
Q 010909 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPE-FLANPFFIAGESYAGIYVPTLAYEVMK 199 (497)
Q Consensus 124 ~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~-~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (497)
..+|++..--| |||+|.+... -++..++ ++++-+++..+++ -+.+.+.+.|+|-|| .++..-++
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s------~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG----~Vqa~AL~ 234 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPS------RKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGG----GVQAEALK 234 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCC------HHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccH----HHHHHHHH
Confidence 45799999988 9999976432 1222222 3344445544443 345789999999999 55444444
No 112
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=80.34 E-value=2.1 Score=42.89 Aligned_cols=66 Identities=24% Similarity=0.360 Sum_probs=49.1
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCC--CCCcHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVP--EYKPREALDF 487 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP--~DqP~~a~~m 487 (497)
..+|+||+|..|-++|+..++..++++- +.....++|.++.+++|+.. ...|.+.-.|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c--------------------~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl 278 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWC--------------------AAGGADVEYVRYPGGGHLGAAFASAPDALAWL 278 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHH--------------------HcCCCCEEEEecCCCChhhhhhcCcHHHHHHH
Confidence 5899999999999999999999888853 11112489999999999965 4667555444
Q ss_pred HHHHHcCCC
Q 010909 488 YSRFLAGKP 496 (497)
Q Consensus 488 ~~~fl~g~~ 496 (497)
-.| +.|+|
T Consensus 279 ~~r-f~G~~ 286 (290)
T PF03583_consen 279 DDR-FAGKP 286 (290)
T ss_pred HHH-HCCCC
Confidence 444 55654
No 113
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=80.19 E-value=3.6 Score=40.58 Aligned_cols=107 Identities=16% Similarity=0.091 Sum_probs=63.3
Q ss_pred CCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcH
Q 010909 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDL 153 (497)
Q Consensus 74 ~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~ 153 (497)
.++|.||++.|..+.++.+..+. ..|.. +-.+++-+|.| |.|.|...... ..+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~----------------~~L~~------~g~~vi~~dl~-g~G~s~~~~~~--~~~~~ 70 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIR----------------CLMEN------SGYKVTCIDLK-SAGIDQSDADS--VTTFD 70 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHH----------------HHHHh------CCCEEEEeccc-CCCCCCCCccc--CCCHH
Confidence 55799999999876665542221 11111 12589999999 99977432211 13444
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
+.++++.++|+ ... ...+++|+|+||||..+-.++ ... .-.++++++.++..
T Consensus 71 ~~~~~l~~~i~----~l~--~~~~v~lvGhS~GG~v~~~~a----~~~------p~~v~~lv~~~~~~ 122 (273)
T PLN02211 71 EYNKPLIDFLS----SLP--ENEKVILVGHSAGGLSVTQAI----HRF------PKKICLAVYVAATM 122 (273)
T ss_pred HHHHHHHHHHH----hcC--CCCCEEEEEECchHHHHHHHH----HhC------hhheeEEEEecccc
Confidence 55555555554 322 136899999999996444444 322 12467777776543
No 114
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.04 E-value=14 Score=35.98 Aligned_cols=56 Identities=13% Similarity=0.249 Sum_probs=36.7
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCC
Q 010909 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng 219 (497)
+.++..++=++|++++. | +++++||.|+|=|. ++..+|+..++ ...+++-..+.=|
T Consensus 90 sL~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGa----Ym~Lqil~~~k----~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGA----YMVLQILPSIK----LVFSVQKAVLLFP 145 (301)
T ss_pred chhhHHHHHHHHHHHhC---C--CCCEEEEEecchhH----HHHHHHhhhcc----cccceEEEEEecc
Confidence 33344556667777655 3 56899999999988 88888887653 2355555544333
No 115
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=78.56 E-value=1.5 Score=44.08 Aligned_cols=53 Identities=19% Similarity=0.126 Sum_probs=38.4
Q ss_pred ceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeecccc
Q 010909 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAG 187 (497)
Q Consensus 127 nllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG 187 (497)
.+.=||.- ..|.|..... ++-+..|+|+..||..+-.. +...+..|.|+|.||
T Consensus 82 ~v~~vd~R-nHG~Sp~~~~----h~~~~ma~dv~~Fi~~v~~~---~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 82 DVYAVDVR-NHGSSPKITV----HNYEAMAEDVKLFIDGVGGS---TRLDPVVLLGHSMGG 134 (315)
T ss_pred ceEEEecc-cCCCCccccc----cCHHHHHHHHHHHHHHcccc---cccCCceecccCcch
Confidence 67778876 7888865333 45667888888888765432 345689999999999
No 116
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=78.45 E-value=3.5 Score=35.50 Aligned_cols=47 Identities=23% Similarity=0.294 Sum_probs=35.6
Q ss_pred HHhhcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceec
Q 010909 405 NLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHT 475 (497)
Q Consensus 405 ~Ll~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHm 475 (497)
.+-...++|++..|+.|.+++....+.+.++++ .+ -.++.|.|++|+
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------GP-KELYIIPGAGHF 145 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------SS-EEEEEETTS-TT
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------CC-cEEEEeCCCcCc
Confidence 344567899999999999999888888877764 12 566889999996
No 117
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=77.16 E-value=4 Score=38.75 Aligned_cols=40 Identities=23% Similarity=0.367 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhc
Q 010909 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (497)
Q Consensus 155 ~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (497)
+-.|+.++...|++.++ ++|||.|+|||=|+. +..+|++.
T Consensus 76 ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~----~l~~LL~e 115 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYN--NGRPFILAGHSQGSM----HLLRLLKE 115 (207)
T ss_pred hHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHH----HHHHHHHH
Confidence 35678888889999886 478999999999994 45555543
No 118
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=76.88 E-value=6.4 Score=36.22 Aligned_cols=105 Identities=19% Similarity=0.166 Sum_probs=61.4
Q ss_pred CCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHH
Q 010909 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (497)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~ 155 (497)
.|.+++++|+|+++.......+. +..... + .+++.+|+| |.|.|. .. .......
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~----------------~~~~~~---~-~~~~~~d~~-g~g~s~-~~----~~~~~~~ 74 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKV----------------LPALAA---R-YRVIAPDLR-GHGRSD-PA----GYSLSAY 74 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHH----------------hhcccc---c-eEEEEeccc-CCCCCC-cc----cccHHHH
Confidence 66999999999998765331100 011111 1 799999999 999996 11 0111112
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 156 a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
++++ ..|++.. ...++.+.|+|+|| .++..+.... +-.++++++.++...+
T Consensus 75 ~~~~----~~~~~~~---~~~~~~l~G~S~Gg----~~~~~~~~~~------p~~~~~~v~~~~~~~~ 125 (282)
T COG0596 75 ADDL----AALLDAL---GLEKVVLVGHSMGG----AVALALALRH------PDRVRGLVLIGPAPPP 125 (282)
T ss_pred HHHH----HHHHHHh---CCCceEEEEecccH----HHHHHHHHhc------chhhheeeEecCCCCc
Confidence 3444 4444433 23349999999998 4444444332 1257777777766553
No 119
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=76.43 E-value=20 Score=37.89 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=23.1
Q ss_pred CCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 176 NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 176 ~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
....|+|.|+|| ..|..+.-.. .=.+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GG----l~AL~~al~~------Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGG----LAALYAGLHW------PERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHH----HHHHHHHHhC------cccccEEEEeccce
Confidence 468999999999 5555553322 12466666666654
No 120
>PLN02753 triacylglycerol lipase
Probab=76.34 E-value=7.4 Score=41.92 Aligned_cols=72 Identities=13% Similarity=0.074 Sum_probs=49.0
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCC--CCCCEEEEeeccccccHHHHHHHHHhcc--cCCCCCeeeeeeeeccCCCCC
Q 010909 151 GDLKTASDTHTFLLKWFELYPEF--LANPFFIAGESYAGIYVPTLAYEVMKGI--DAGEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~--~~~~~yi~GESYgG~yvP~la~~i~~~~--~~~~~~~inLkGi~iGng~~d 222 (497)
+...+.+++++.|++..+++|.- ..-.++|+|||-||-.+-..|..|.... .......+++.-+..|.|-+.
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 44567888999999999988742 2457999999999988877777776531 111111345566666666553
No 121
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=75.78 E-value=6.8 Score=39.14 Aligned_cols=43 Identities=21% Similarity=0.387 Sum_probs=34.4
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCC
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVP 477 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP 477 (497)
.+++||.+|+.|.+|+....+.+.+++. + -.++++.++||+..
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP------------------------E-AELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC------------------------C-CEEEEECCCCCCCC
Confidence 5899999999999999987766655532 2 56778899999974
No 122
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=75.73 E-value=5.1 Score=41.01 Aligned_cols=62 Identities=23% Similarity=0.205 Sum_probs=46.5
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCc---HHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKP---REAL 485 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP---~~a~ 485 (497)
-..+|++++|+.|.+++....+.+.+.+. + .+ .+++++ .+||+-+.+.| +.+.
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~-----------------~-----~~-~~~~~~-~~gH~~~~~~~~~~~~v~ 340 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVS-----------------S-----ED-YTELSF-PGGHIGIYVSGKAQKEVP 340 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcC-----------------C-----CC-eEEEEc-CCCCEEEEECchhHhhhh
Confidence 36899999999999999998888777753 0 12 445544 58999998876 5666
Q ss_pred HHHHHHHcC
Q 010909 486 DFYSRFLAG 494 (497)
Q Consensus 486 ~m~~~fl~g 494 (497)
.-+.+|+..
T Consensus 341 ~~i~~wl~~ 349 (350)
T TIGR01836 341 PAIGKWLQA 349 (350)
T ss_pred HHHHHHHHh
Confidence 777778753
No 123
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=75.72 E-value=2.5 Score=40.08 Aligned_cols=59 Identities=32% Similarity=0.445 Sum_probs=40.7
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
+.+|++.+|+.|.++|....+...+.|+ -. +.+++|.+..+.||-++ .+.+..+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~---------------~~------~~~v~~~~~~g~gH~i~----~~~~~~~~ 209 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLK---------------AA------GANVEFHEYPGGGHEIS----PEELRDLR 209 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHH---------------CT------T-GEEEEEETT-SSS------HHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHH---------------hc------CCCEEEEEcCCCCCCCC----HHHHHHHH
Confidence 6889999999999999988887666653 01 11388999999999986 45666677
Q ss_pred HHHc
Q 010909 490 RFLA 493 (497)
Q Consensus 490 ~fl~ 493 (497)
+||.
T Consensus 210 ~~l~ 213 (216)
T PF02230_consen 210 EFLE 213 (216)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7764
No 124
>PLN02719 triacylglycerol lipase
Probab=75.30 E-value=8.2 Score=41.49 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=48.8
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCC--CCCEEEEeeccccccHHHHHHHHHhcc--cCCCCCeeeeeeeeccCCCCC
Q 010909 151 GDLKTASDTHTFLLKWFELYPEFL--ANPFFIAGESYAGIYVPTLAYEVMKGI--DAGEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~~--~~~~yi~GESYgG~yvP~la~~i~~~~--~~~~~~~inLkGi~iGng~~d 222 (497)
+...+.+++++.|++..+++|... ...+.|+|||-||-.+-..|..|.+.. +......+++.-+..|.|-+.
T Consensus 271 ~k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 271 SKFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred cchhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 334677889999999999998642 347999999999988888787786531 111111234555666666553
No 125
>KOG3101 consensus Esterase D [General function prediction only]
Probab=75.19 E-value=37 Score=32.44 Aligned_cols=157 Identities=15% Similarity=0.172 Sum_probs=74.9
Q ss_pred ceEEEEEEec----CCCCeeEEE-EEEe-cCCCCCCCCEEEEeCCCCchhhH-----hh---HhhhcCCeeeeCCCCCCC
Q 010909 46 KHYSGYVTVD----ESHGRNLFY-YFVE-SEGNPSKDPVVLWLNGGPGCSSF-----DG---FIYEHGPFNFEAPTTKGS 111 (497)
Q Consensus 46 ~~~sGy~~v~----~~~~~~lfy-~f~~-s~~~~~~~PlvlWlnGGPG~SS~-----~g---~f~E~GP~~~~~~~~~~~ 111 (497)
+.+-|+..+- .+.+..|=| .|++ +..+.+.-|+++||.|= -|.-. .| .-.++|=-.|.+|....+
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL-TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG 86 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL-TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRG 86 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC-cccchhhHhhhhHHHhHhhcCeEEECCCCCCCc
Confidence 4455555552 122334544 4444 23333456999999975 45421 11 123466666776653322
Q ss_pred CCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHH-HCCCCCCCCEEEEeeccccccH
Q 010909 112 LPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFE-LYPEFLANPFFIAGESYAGIYV 190 (497)
Q Consensus 112 ~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~-~~p~~~~~~~yi~GESYgG~yv 190 (497)
-.+.--+.||. ==.|.|| |.+.........=..-+.+.+-|-+.+. .+-.+-..+.-|+|+|.|||=+
T Consensus 87 -~~v~g~~eswD---------FG~GAGF-YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGA 155 (283)
T KOG3101|consen 87 -VEVAGDDESWD---------FGQGAGF-YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGA 155 (283)
T ss_pred -cccCCCccccc---------ccCCcee-EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCce
Confidence 12333455774 3457787 4433222111111222223322222222 1112333458899999999743
Q ss_pred HHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 191 PTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 191 P~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
-.++.+ | .-..|++-.-.|..+|.
T Consensus 156 l~~~Lk----n------~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 156 LTIYLK----N------PSKYKSVSAFAPICNPI 179 (283)
T ss_pred EEEEEc----C------cccccceeccccccCcc
Confidence 322221 1 12456666666777765
No 126
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=72.80 E-value=14 Score=35.58 Aligned_cols=86 Identities=13% Similarity=0.120 Sum_probs=54.1
Q ss_pred ceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCC
Q 010909 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (497)
Q Consensus 127 nllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 206 (497)
+...|+-|.+.+-=.+-....+..+-.+.++.+.+.|+.+.. ..+++.|+|.|-|+.-+-..++++.+.....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC--
Confidence 445566665433211111122334555667778888877665 5689999999999977666666666533211
Q ss_pred CeeeeeeeeccCCC
Q 010909 207 PVLNFKGYLVGNGV 220 (497)
Q Consensus 207 ~~inLkGi~iGng~ 220 (497)
.-+++-+.+||+-
T Consensus 77 -~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 77 -PDDLSFVLIGNPR 89 (225)
T ss_pred -cCceEEEEecCCC
Confidence 2478899999885
No 127
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=72.29 E-value=14 Score=42.07 Aligned_cols=44 Identities=14% Similarity=0.022 Sum_probs=28.5
Q ss_pred CcHHHHHHHHHHHHHHH------HH---CCCCCCCCEEEEeeccccccHHHHH
Q 010909 151 GDLKTASDTHTFLLKWF------EL---YPEFLANPFFIAGESYAGIYVPTLA 194 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~------~~---~p~~~~~~~yi~GESYgG~yvP~la 194 (497)
+-.+...|+.......- .. +..+...++++.|||.||..+..++
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~ 573 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFI 573 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHH
Confidence 45677777775554432 11 2234567999999999996665555
No 128
>COG0400 Predicted esterase [General function prediction only]
Probab=71.95 E-value=22 Score=33.83 Aligned_cols=78 Identities=18% Similarity=0.143 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcccc---ccCc
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEID---GNAL 230 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~q---~~~~ 230 (497)
..+..+.+||....+.+. ...+++++.|-|-|+.++.++.. .. +-.++|+++-.|..-+..+ ...-
T Consensus 78 ~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l----~~------~~~~~~ail~~g~~~~~~~~~~~~~~ 146 (207)
T COG0400 78 LETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGL----TL------PGLFAGAILFSGMLPLEPELLPDLAG 146 (207)
T ss_pred HHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHH----hC------chhhccchhcCCcCCCCCccccccCC
Confidence 446677888888887774 44578999999999954444433 22 2368888888888755431 2334
Q ss_pred hhhhccCCCCCH
Q 010909 231 VPFVHGMGLISD 242 (497)
Q Consensus 231 ~~f~~~~gli~~ 242 (497)
.+.+..||--|+
T Consensus 147 ~pill~hG~~Dp 158 (207)
T COG0400 147 TPILLSHGTEDP 158 (207)
T ss_pred CeEEEeccCcCC
Confidence 555666765443
No 129
>PRK13604 luxD acyl transferase; Provisional
Probab=71.52 E-value=7.2 Score=39.40 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=38.3
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCC
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPE 478 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~ 478 (497)
..+||+++|+.|.+|+..+.+...++++ .++ -.++.+.||+|....
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~----------------------s~~-kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR----------------------SEQ-CKLYSLIGSSHDLGE 247 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc----------------------cCC-cEEEEeCCCccccCc
Confidence 5999999999999999999999888753 123 678889999998753
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=71.46 E-value=6.8 Score=36.65 Aligned_cols=65 Identities=11% Similarity=0.096 Sum_probs=50.8
Q ss_pred cCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCc
Q 010909 150 TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 150 ~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp 223 (497)
.+-+++|.|+.+.++.+.++. ..+.+.|.|-|+|.--+|.+..+|-... +-.++++++..+-...
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~------r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAAL------RARVAQVVLLSPSTTA 109 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHH------HhheeEEEEeccCCcc
Confidence 356789999999999888754 5678999999999999999999886544 2357777776665443
No 131
>COG0400 Predicted esterase [General function prediction only]
Probab=71.15 E-value=4.3 Score=38.57 Aligned_cols=60 Identities=23% Similarity=0.328 Sum_probs=43.1
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
++.+|++.+|..|.+|+..-+++..+.|.= . +.+..+.++. .||.++.. .++.+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~---------------~------g~~v~~~~~~-~GH~i~~e----~~~~~ 198 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTA---------------S------GADVEVRWHE-GGHEIPPE----ELEAA 198 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHH---------------c------CCCEEEEEec-CCCcCCHH----HHHHH
Confidence 579999999999999999998887777641 1 1125566666 99998754 44445
Q ss_pred HHHHcC
Q 010909 489 SRFLAG 494 (497)
Q Consensus 489 ~~fl~g 494 (497)
++|+.+
T Consensus 199 ~~wl~~ 204 (207)
T COG0400 199 RSWLAN 204 (207)
T ss_pred HHHHHh
Confidence 556543
No 132
>PLN02324 triacylglycerol lipase
Probab=70.79 E-value=13 Score=39.12 Aligned_cols=49 Identities=16% Similarity=0.206 Sum_probs=38.6
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhc
Q 010909 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (497)
+...+.+++.+.|+++++++|.. ...+.|+|||-||-.+-..|..|.+.
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHh
Confidence 34467788999999999998853 23799999999998887777777653
No 133
>PF03283 PAE: Pectinacetylesterase
Probab=70.46 E-value=44 Score=34.65 Aligned_cols=153 Identities=18% Similarity=0.150 Sum_probs=77.0
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhH----hhhcCCeeeeCCCCC-CCC--CcccccCCCcccccceEee
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGF----IYEHGPFNFEAPTTK-GSL--PKLHVNPYSWTKVSSIIYL 131 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~----f~E~GP~~~~~~~~~-~~~--~~l~~n~~sW~~~anllfi 131 (497)
|+--.|++.+.. ....+-++|.|+||=-|-+..-- ..++|-...-.+... .+. ..-..||.=++ .|+|||
T Consensus 34 GS~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~v 110 (361)
T PF03283_consen 34 GSPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFV 110 (361)
T ss_pred CCCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEE
Confidence 455556665542 24468999999999777764322 234443321111111 110 12245662221 467777
Q ss_pred cCCCccccccccCCCCcccCcHH----HHHHHHHHHHHHHHH-CCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCC
Q 010909 132 DSPAGVGLSYSENKTDYVTGDLK----TASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (497)
Q Consensus 132 DqPvGtGfS~~~~~~~~~~~~~~----~a~d~~~fL~~F~~~-~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~ 206 (497)
|--+|=++.-+......+... ....+.+.|...+.+ +++ ...+.|+|.|-||.=+..-+.+|.+.-..
T Consensus 111 --pYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~--- 183 (361)
T PF03283_consen 111 --PYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS--- 183 (361)
T ss_pred --EecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---
Confidence 444444443222111111111 133344455555555 443 25799999999998777777777665321
Q ss_pred CeeeeeeeeccCCCCC
Q 010909 207 PVLNFKGYLVGNGVTD 222 (497)
Q Consensus 207 ~~inLkGi~iGng~~d 222 (497)
..+++++.=..-++|
T Consensus 184 -~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 184 -SVKVKCLSDSGFFLD 198 (361)
T ss_pred -CceEEEecccccccc
Confidence 245555554433343
No 134
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=70.45 E-value=14 Score=36.06 Aligned_cols=75 Identities=12% Similarity=0.223 Sum_probs=51.4
Q ss_pred ceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCC-CCCCEEEEeeccccccHHHHHHHHHhcccCCC
Q 010909 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEF-LANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (497)
Q Consensus 127 nllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~-~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~ 205 (497)
|++=.|-- |-|.|.++... .+.-+..+..+++|++ ++ +..++.|+|.|-|.. | +..+..+.
T Consensus 90 nv~~~DYS-GyG~S~G~psE---~n~y~Di~avye~Lr~------~~g~~~~Iil~G~SiGt~--~--tv~Lasr~---- 151 (258)
T KOG1552|consen 90 NVVSYDYS-GYGRSSGKPSE---RNLYADIKAVYEWLRN------RYGSPERIILYGQSIGTV--P--TVDLASRY---- 151 (258)
T ss_pred eEEEEecc-cccccCCCccc---ccchhhHHHHHHHHHh------hcCCCceEEEEEecCCch--h--hhhHhhcC----
Confidence 56666755 99999886654 2455556667777775 33 457899999999983 3 33333222
Q ss_pred CCeeeeeeeeccCCCCCc
Q 010909 206 KPVLNFKGYLVGNGVTDE 223 (497)
Q Consensus 206 ~~~inLkGi~iGng~~dp 223 (497)
.+.|+++-+|+++-
T Consensus 152 ----~~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 152 ----PLAAVVLHSPFTSG 165 (258)
T ss_pred ----CcceEEEeccchhh
Confidence 29999999999874
No 135
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=69.78 E-value=7.5 Score=36.30 Aligned_cols=50 Identities=18% Similarity=0.148 Sum_probs=33.8
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcccc
Q 010909 161 TFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEID 226 (497)
Q Consensus 161 ~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~q 226 (497)
+.+.+.++.. ....+.|.|-|-||.|+-.+|.+. +++. ++.||.+.|...
T Consensus 47 ~~l~~~i~~~---~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~ 96 (187)
T PF05728_consen 47 AQLEQLIEEL---KPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYEL 96 (187)
T ss_pred HHHHHHHHhC---CCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHH
Confidence 3444444433 334599999999998877776543 4555 778999998643
No 136
>PLN02761 lipase class 3 family protein
Probab=69.66 E-value=14 Score=39.77 Aligned_cols=72 Identities=8% Similarity=0.049 Sum_probs=47.5
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCC---CCCCEEEEeeccccccHHHHHHHHHhcccC---CCCCeeeeeeeeccCCCCC
Q 010909 151 GDLKTASDTHTFLLKWFELYPEF---LANPFFIAGESYAGIYVPTLAYEVMKGIDA---GEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~---~~~~~yi~GESYgG~yvP~la~~i~~~~~~---~~~~~inLkGi~iGng~~d 222 (497)
+...+.+++++.|++..+.+|.. ..-.++|+|||-||-.+-..|..|....-. .....+++.-+..|.|-+.
T Consensus 266 ~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 266 SSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred cchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 34467788999999999988642 123699999999998777777777642210 0112345666666666553
No 137
>COG4099 Predicted peptidase [General function prediction only]
Probab=69.59 E-value=44 Score=33.60 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccHH
Q 010909 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYVP 191 (497)
Q Consensus 159 ~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP 191 (497)
..+.+.+-+..++..-.+.+|+.|-|-||.-.=
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~ 284 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTW 284 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhH
Confidence 445556556677778788999999999994433
No 138
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=69.41 E-value=35 Score=34.06 Aligned_cols=90 Identities=13% Similarity=0.110 Sum_probs=51.1
Q ss_pred hHHHHHHHhhcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeE--eCC---eeceEEEEecCceEEEEEcCce
Q 010909 399 MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWT--SNG---QVAGYTQGYENNLTFLTIKGAG 473 (497)
Q Consensus 399 ~~~~~~~Ll~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~--~~~---~~aGyvk~~~~~Ltfv~V~~AG 473 (497)
..+.++.|-++.+||++-.|-.|.++--.=.+..+... ++.+.+.-=. .+. ++.--..+. +.-.-|.+..-|
T Consensus 201 q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~~~-~~~~sv~f~~dg 277 (297)
T PF06342_consen 201 QKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFASG-QKGASVFFAKDG 277 (297)
T ss_pred HHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHhcC-CceeEEEEecCC
Confidence 35566777778899999999999887655444444332 3333222100 000 010001111 124456788999
Q ss_pred ecCCCCCcHHHHHHHHHH
Q 010909 474 HTVPEYKPREALDFYSRF 491 (497)
Q Consensus 474 HmVP~DqP~~a~~m~~~f 491 (497)
|+..-.||+-.-+.+...
T Consensus 278 Hf~qK~~A~lIA~~i~~m 295 (297)
T PF06342_consen 278 HFQQKFRADLIAEAIKKM 295 (297)
T ss_pred hHHhHHHHHHHHHHHHHh
Confidence 999999987666666553
No 139
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=69.06 E-value=8.6 Score=37.20 Aligned_cols=67 Identities=9% Similarity=0.017 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
..+.+|.+||+...+.. ...+++|.+||.|+.-+-.....+...... .+..-.|..|++.+|-+|..
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHH
Confidence 44556666666554432 346899999999997666655555544321 01123788999999988864
No 140
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=68.88 E-value=11 Score=38.51 Aligned_cols=62 Identities=21% Similarity=0.304 Sum_probs=37.8
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHH
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (497)
.-++=||-| |-|+|-..+... .=.+.+..+.++.|+..+ ...+++|.|+||||..+=.+|..
T Consensus 87 ~~v~aiDl~-G~g~~s~~~~~~-----~y~~~~~v~~i~~~~~~~---~~~~~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 87 LRVLAIDLP-GHGYSSPLPRGP-----LYTLRELVELIRRFVKEV---FVEPVSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred eEEEEEecC-CCCcCCCCCCCC-----ceehhHHHHHHHHHHHhh---cCcceEEEEeCcHHHHHHHHHHh
Confidence 347889988 877542222211 123455566666666644 34679999999999555444443
No 141
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=68.54 E-value=29 Score=41.98 Aligned_cols=102 Identities=16% Similarity=0.102 Sum_probs=62.0
Q ss_pred CCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCcccCcHHH
Q 010909 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (497)
Q Consensus 76 ~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~ 155 (497)
.|-++.+.|+.|.+..+..+.+ .+ .+...++-+|.| |.|-+. ....+-++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~----------------~l-------~~~~~v~~~~~~-g~~~~~-----~~~~~l~~l 1118 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSR----------------YL-------DPQWSIYGIQSP-RPDGPM-----QTATSLDEV 1118 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHH----------------hc-------CCCCcEEEEECC-CCCCCC-----CCCCCHHHH
Confidence 3567888988887765433321 01 122467778888 665331 112355667
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCC
Q 010909 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (497)
Q Consensus 156 a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng 219 (497)
|+++.+.++. ..| ..|+.|.|+|+||.-+-.+|.++.++. ..+..+++.++
T Consensus 1119 a~~~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~ 1169 (1296)
T PRK10252 1119 CEAHLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDT 1169 (1296)
T ss_pred HHHHHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecC
Confidence 7777766664 122 358999999999977777777665432 24555555554
No 142
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=67.89 E-value=24 Score=32.05 Aligned_cols=76 Identities=14% Similarity=0.155 Sum_probs=45.1
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
...++-+|.| |.|.+... ..+.+..++.....+.. ..+ ..|+.++|+|+||.-+-.++..+.++.
T Consensus 25 ~~~v~~~~~~-g~~~~~~~-----~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~--- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEPL-----PASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG--- 89 (212)
T ss_pred CccEEEecCC-CCCCCCCC-----CCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC---
Confidence 3578888877 66644221 12333444444444432 232 458999999999988877777776532
Q ss_pred CCCeeeeeeeeccCC
Q 010909 205 EKPVLNFKGYLVGNG 219 (497)
Q Consensus 205 ~~~~inLkGi~iGng 219 (497)
..++++++.++
T Consensus 90 ----~~~~~l~~~~~ 100 (212)
T smart00824 90 ----IPPAAVVLLDT 100 (212)
T ss_pred ----CCCcEEEEEcc
Confidence 23555655544
No 143
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=67.01 E-value=14 Score=39.26 Aligned_cols=48 Identities=17% Similarity=0.216 Sum_probs=32.1
Q ss_pred ccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHH
Q 010909 136 GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVP 191 (497)
Q Consensus 136 GtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP 191 (497)
|.||+.... ....+..+++.+.+.+.++..+ .+++.|+|||.||..+-
T Consensus 130 g~gYDwR~~-----~~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 130 GFGYDFRQS-----NRLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVK 177 (440)
T ss_pred cCCCCcccc-----ccHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHH
Confidence 666665421 1123456778888888877654 46899999999994443
No 144
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=66.46 E-value=11 Score=37.94 Aligned_cols=64 Identities=22% Similarity=0.253 Sum_probs=52.6
Q ss_pred hcCceEEEEecCCccccC-chhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCc---HH
Q 010909 408 LRGYRALIFSGDHDMCVP-FTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKP---RE 483 (497)
Q Consensus 408 ~~~irVLiy~Gd~D~i~n-~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP---~~ 483 (497)
...++|||.+|..|.++. ..+..++.++++ ..+ .+++.+.||-|.+-.+.+ +.
T Consensus 226 ~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~----------------------~~~-~~~~~~~g~~He~~~E~~~~r~~ 282 (298)
T COG2267 226 AIALPVLLLQGGDDRVVDNVEGLARFFERAG----------------------SPD-KELKVIPGAYHELLNEPDRAREE 282 (298)
T ss_pred cccCCEEEEecCCCccccCcHHHHHHHHhcC----------------------CCC-ceEEecCCcchhhhcCcchHHHH
Confidence 447999999999999999 588888888865 223 678889999999998775 57
Q ss_pred HHHHHHHHHcC
Q 010909 484 ALDFYSRFLAG 494 (497)
Q Consensus 484 a~~m~~~fl~g 494 (497)
+++-+..|+..
T Consensus 283 ~~~~~~~~l~~ 293 (298)
T COG2267 283 VLKDILAWLAE 293 (298)
T ss_pred HHHHHHHHHHh
Confidence 88888888865
No 145
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=66.45 E-value=11 Score=39.49 Aligned_cols=53 Identities=13% Similarity=-0.011 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCEE-EEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCC
Q 010909 151 GDLKTASDTHTFLLKWFELYPEFLANPFF-IAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~~~~~~y-i~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~ 220 (497)
+-.+.++++.++|++ . .-.++. |.|+|+|| .+|..+..+. +-.++++++.++.
T Consensus 142 t~~d~~~~~~~ll~~----l---gi~~~~~vvG~SmGG----~ial~~a~~~------P~~v~~lv~ia~~ 195 (389)
T PRK06765 142 TILDFVRVQKELIKS----L---GIARLHAVMGPSMGG----MQAQEWAVHY------PHMVERMIGVIGN 195 (389)
T ss_pred cHHHHHHHHHHHHHH----c---CCCCceEEEEECHHH----HHHHHHHHHC------hHhhheEEEEecC
Confidence 444555555555543 2 334665 99999999 5555554433 2347777777654
No 146
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=66.42 E-value=5 Score=37.98 Aligned_cols=89 Identities=12% Similarity=0.034 Sum_probs=59.0
Q ss_pred ccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeee
Q 010909 136 GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYL 215 (497)
Q Consensus 136 GtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~ 215 (497)
-+||-++... ++.++...++.++++--++.+|.- ..+-+.|+|-|.|.+..+..++ . ...+.|++
T Consensus 102 svgY~l~~q~----htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~----r-----~prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQV----HTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQ----R-----SPRIWGLI 166 (270)
T ss_pred EeccCcCccc----ccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHh----c-----CchHHHHH
Confidence 5666666443 466788888899988778888753 3599999999996555444442 1 24688999
Q ss_pred ccCCCCCccccccCchhhhccCCCCC
Q 010909 216 VGNGVTDEEIDGNALVPFVHGMGLIS 241 (497)
Q Consensus 216 iGng~~dp~~q~~~~~~f~~~~gli~ 241 (497)
+-.|+-+-. -.+..++....||-.
T Consensus 167 l~~GvY~l~--EL~~te~g~dlgLt~ 190 (270)
T KOG4627|consen 167 LLCGVYDLR--ELSNTESGNDLGLTE 190 (270)
T ss_pred HHhhHhhHH--HHhCCccccccCccc
Confidence 999987643 233334445556543
No 147
>PRK10985 putative hydrolase; Provisional
Probab=65.97 E-value=17 Score=36.71 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=51.1
Q ss_pred CeeEEEEEEecCCCCCCCCEEEEeCCCCchhhH-hh-----HhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeec
Q 010909 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSF-DG-----FIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLD 132 (497)
Q Consensus 59 ~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~-~g-----~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD 132 (497)
|..+.+++.+....+..+|+||.+.|.+|++.. .. .|.+.| .+++-+|
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G--------------------------~~v~~~d 94 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRG--------------------------WLGVVMH 94 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCC--------------------------CEEEEEe
Confidence 444544433333334568999999999987532 11 111111 2455567
Q ss_pred CCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeecccccc
Q 010909 133 SPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIY 189 (497)
Q Consensus 133 qPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~y 189 (497)
.+ |.|=|-......+.... .+|+..+++...+++| ..+++++|+|.||..
T Consensus 95 ~r-G~g~~~~~~~~~~~~~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i 144 (324)
T PRK10985 95 FR-GCSGEPNRLHRIYHSGE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNM 144 (324)
T ss_pred CC-CCCCCccCCcceECCCc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHH
Confidence 66 65533221112121222 2344444433333444 358999999999943
No 148
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=65.69 E-value=12 Score=39.19 Aligned_cols=65 Identities=23% Similarity=0.368 Sum_probs=39.4
Q ss_pred cceEeec-------CCCccccccccCCC-CcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHH
Q 010909 126 SSIIYLD-------SPAGVGLSYSENKT-DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEV 197 (497)
Q Consensus 126 anllfiD-------qPvGtGfS~~~~~~-~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i 197 (497)
|-|||++ +|.|.- ||.+... +| -+.+|+-.|+.+.|+ ++++...=+..|+..+|-|||| +||..+
T Consensus 112 AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy-LtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGG----MLaAWf 184 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQ-SYKDARHLGY-LTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGG----MLAAWF 184 (492)
T ss_pred ceEEEeehhccccCCCCcch-hccChhhhcc-ccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhh----HHHHHH
Confidence 4677776 566665 4443221 22 355666666665555 4444443356799999999999 555544
No 149
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=63.57 E-value=2.6 Score=43.17 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=45.8
Q ss_pred cccceEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHh
Q 010909 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (497)
Q Consensus 124 ~~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (497)
...|||-||--.+..-.|... ..+...+++.+.+||+...... .+...+++|.|+|-|+|-+-.+++++..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~a----~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQA----VANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHHH----HHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccch----hhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 357999999655544333211 1344566777778877766443 2334689999999999998888888765
No 150
>PRK13604 luxD acyl transferase; Provisional
Probab=63.10 E-value=55 Score=33.12 Aligned_cols=125 Identities=18% Similarity=0.239 Sum_probs=65.6
Q ss_pred CCeeEEEEEEecC-CCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCc
Q 010909 58 HGRNLFYYFVESE-GNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAG 136 (497)
Q Consensus 58 ~~~~lfy~f~~s~-~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvG 136 (497)
.|..|.=|+.+.+ +++...|+||... |.|+.... +... -.+=+.+=.++|-.|.--|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~--~~~~-------------------A~~La~~G~~vLrfD~rg~ 75 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIAS-GFARRMDH--FAGL-------------------AEYLSSNGFHVIRYDSLHH 75 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChHH--HHHH-------------------HHHHHHCCCEEEEecCCCC
Confidence 4677776776664 3455667777644 56665320 1100 0111122347777886645
Q ss_pred cccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeec
Q 010909 137 VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLV 216 (497)
Q Consensus 137 tGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~i 216 (497)
.|=|-++-. ....+. ...|+...+ .|++.. ...+++|.|+|.|| .+|..... ..+++++++
T Consensus 76 ~GeS~G~~~-~~t~s~--g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGg----ava~~~A~--------~~~v~~lI~ 136 (307)
T PRK13604 76 VGLSSGTID-EFTMSI--GKNSLLTVV-DWLNTR---GINNLGLIAASLSA----RIAYEVIN--------EIDLSFLIT 136 (307)
T ss_pred CCCCCCccc-cCcccc--cHHHHHHHH-HHHHhc---CCCceEEEEECHHH----HHHHHHhc--------CCCCCEEEE
Confidence 576633211 111111 133443333 233332 13579999999999 44422211 135889999
Q ss_pred cCCCCCc
Q 010909 217 GNGVTDE 223 (497)
Q Consensus 217 Gng~~dp 223 (497)
..|+.+-
T Consensus 137 ~sp~~~l 143 (307)
T PRK13604 137 AVGVVNL 143 (307)
T ss_pred cCCcccH
Confidence 9999883
No 151
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=62.26 E-value=55 Score=35.12 Aligned_cols=31 Identities=13% Similarity=0.121 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeeccccccH
Q 010909 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYV 190 (497)
Q Consensus 159 ~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yv 190 (497)
.++++++..+.|-. -..++-|+|||=|+.-+
T Consensus 164 ALkWV~~NIe~FGG-Dp~NVTl~GeSAGa~si 194 (491)
T COG2272 164 ALKWVRDNIEAFGG-DPQNVTLFGESAGAASI 194 (491)
T ss_pred HHHHHHHHHHHhCC-CccceEEeeccchHHHH
Confidence 35777888887754 23579999999999433
No 152
>PLN02310 triacylglycerol lipase
Probab=61.50 E-value=18 Score=37.88 Aligned_cols=65 Identities=18% Similarity=0.186 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCC-CCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCC
Q 010909 153 LKTASDTHTFLLKWFELYPEF-LANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 153 ~~~a~d~~~fL~~F~~~~p~~-~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~d 222 (497)
..+.+++.+.+++..+.+++- ....+.|+|||-||-.+-..|..|.... +.+++.-+..|.|-+.
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 345677888888888877632 2347999999999977766665654322 1344555666666553
No 153
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=61.50 E-value=18 Score=34.56 Aligned_cols=58 Identities=28% Similarity=0.411 Sum_probs=42.4
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCc--HHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKP--REALDF 487 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP--~~a~~m 487 (497)
..+.|-+.|+.|.+++..-.+..+++ +.+. .+...-.||+||.-.| +...+.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~------------------------~~~a--~vl~HpggH~VP~~~~~~~~i~~f 216 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAES------------------------FKDA--TVLEHPGGHIVPNKAKYKEKIADF 216 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHh------------------------cCCC--eEEecCCCccCCCchHHHHHHHHH
Confidence 57899999999999998866666555 3332 5667899999998765 455556
Q ss_pred HHHHHc
Q 010909 488 YSRFLA 493 (497)
Q Consensus 488 ~~~fl~ 493 (497)
|+.++.
T Consensus 217 i~~~~~ 222 (230)
T KOG2551|consen 217 IQSFLQ 222 (230)
T ss_pred HHHHHH
Confidence 665553
No 154
>PLN02408 phospholipase A1
Probab=58.79 E-value=25 Score=36.38 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhc
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (497)
.+.+++.+.|+++++++|.. ...++|+|||-||-.+-..|..|...
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 56778889999999999864 34699999999998877777777653
No 155
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=57.31 E-value=14 Score=36.14 Aligned_cols=59 Identities=31% Similarity=0.457 Sum_probs=42.9
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
..+|||++|..|-++|+.=..+..+..+ +..-..+|+||||--..--| .-++.++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k------------------------~~~epl~v~g~gH~~~~~~~-~yi~~l~ 246 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK------------------------EKVEPLWVKGAGHNDIELYP-EYIEHLR 246 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc------------------------ccCCCcEEecCCCcccccCH-HHHHHHH
Confidence 3599999999999999875555444421 22567899999999887666 4566666
Q ss_pred HHHc
Q 010909 490 RFLA 493 (497)
Q Consensus 490 ~fl~ 493 (497)
+|+.
T Consensus 247 ~f~~ 250 (258)
T KOG1552|consen 247 RFIS 250 (258)
T ss_pred HHHH
Confidence 6764
No 156
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=56.67 E-value=21 Score=34.35 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHh
Q 010909 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (497)
Q Consensus 157 ~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (497)
+...+++++..+.+++ +++|+|||=||..+-+.|..+-+
T Consensus 69 ~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 3445677777777764 69999999999777776666433
No 157
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=55.64 E-value=28 Score=35.48 Aligned_cols=121 Identities=19% Similarity=0.216 Sum_probs=69.4
Q ss_pred CCeeEEEEEEecCCCCCCCCEEEEeCCCCchhh------HhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEee
Q 010909 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSS------FDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYL 131 (497)
Q Consensus 58 ~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS------~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfi 131 (497)
.+.-.+.|.-. . .....|++|-+.|==|.|. +...+.+-| + .++-.
T Consensus 59 g~~~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg-~-------------------------~~Vv~ 110 (345)
T COG0429 59 GGFIDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG-W-------------------------LVVVF 110 (345)
T ss_pred CCEEEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC-C-------------------------eEEEE
Confidence 45566667643 1 2234599999999877773 222233333 2 23334
Q ss_pred cCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeee
Q 010909 132 DSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNF 211 (497)
Q Consensus 132 DqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inL 211 (497)
+-- |-|.+-...+.-+...+. +|+..||....+.+| .+|+|.+|-|.||. .+|..+.+..+ +. ...
T Consensus 111 ~~R-gcs~~~n~~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~---d~-~~~ 176 (345)
T COG0429 111 HFR-GCSGEANTSPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGD---DL-PLD 176 (345)
T ss_pred ecc-cccCCcccCcceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhcc---Cc-ccc
Confidence 423 555554444444444554 444555544444565 47999999999995 77888877543 11 225
Q ss_pred eeeeccCCC
Q 010909 212 KGYLVGNGV 220 (497)
Q Consensus 212 kGi~iGng~ 220 (497)
.++++-+|+
T Consensus 177 aa~~vs~P~ 185 (345)
T COG0429 177 AAVAVSAPF 185 (345)
T ss_pred eeeeeeCHH
Confidence 555555554
No 158
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=55.17 E-value=1.7e+02 Score=33.43 Aligned_cols=90 Identities=23% Similarity=0.361 Sum_probs=49.2
Q ss_pred CCEEEEeCCCCchh-------hHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCccccccccCCCCc
Q 010909 76 DPVVLWLNGGPGCS-------SFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDY 148 (497)
Q Consensus 76 ~PlvlWlnGGPG~S-------S~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfS~~~~~~~~ 148 (497)
-| ||++-|--|+- |...+....||++=. .-.+||++. +-.=+| | ..+-...
T Consensus 90 IP-VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t---------~~~d~~~~~----DFFaVD------F--nEe~tAm 147 (973)
T KOG3724|consen 90 IP-VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKT---------EDRDNPFSF----DFFAVD------F--NEEFTAM 147 (973)
T ss_pred ce-EEEecCCCCchHHHHHHHHHHhhhhcCCchhhh---------hcccCcccc----ceEEEc------c--cchhhhh
Confidence 35 45676666642 445556678998833 235677766 222233 1 1111111
Q ss_pred -ccCcHHHHHHHHHHHHH---HHHHCCCCC---CCCEEEEeecccc
Q 010909 149 -VTGDLKTASDTHTFLLK---WFELYPEFL---ANPFFIAGESYAG 187 (497)
Q Consensus 149 -~~~~~~~a~d~~~fL~~---F~~~~p~~~---~~~~yi~GESYgG 187 (497)
-....+.++.+.++++. .++.-+|++ ...+.|.|||+||
T Consensus 148 ~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGG 193 (973)
T KOG3724|consen 148 HGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGG 193 (973)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchh
Confidence 12334455656655554 444445565 3459999999999
No 159
>PLN02802 triacylglycerol lipase
Probab=54.92 E-value=29 Score=37.43 Aligned_cols=63 Identities=13% Similarity=0.084 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
.+.+++.+-|+++++++|.- ...++|+|||-||-.+-..|..|...... .+.+.-+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCc
Confidence 45678888899999888742 24799999999998877777777553211 12344555555544
No 160
>PRK04940 hypothetical protein; Provisional
Probab=53.78 E-value=27 Score=32.42 Aligned_cols=37 Identities=14% Similarity=0.175 Sum_probs=27.7
Q ss_pred CCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCccc
Q 010909 176 NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (497)
Q Consensus 176 ~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~ 225 (497)
.++.|+|-|-||.|+-.||.+ ..++. +|.||.+.|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~------------~g~~a-VLiNPAv~P~~ 96 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFL------------CGIRQ-VIFNPNLFPEE 96 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHH------------HCCCE-EEECCCCChHH
Confidence 478999999999777777764 23444 45699999864
No 161
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=53.23 E-value=23 Score=33.64 Aligned_cols=48 Identities=10% Similarity=-0.014 Sum_probs=34.6
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhc
Q 010909 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (497)
Q Consensus 152 ~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (497)
-+..++.+.+.|.+..+..+.- .+++.+.|+|.||.++=+....+.+.
T Consensus 55 I~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 3456888888888888776543 46899999999997765555444443
No 162
>PLN02847 triacylglycerol lipase
Probab=52.37 E-value=29 Score=38.10 Aligned_cols=61 Identities=21% Similarity=0.229 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccC-CCCCc
Q 010909 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN-GVTDE 223 (497)
Q Consensus 155 ~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGn-g~~dp 223 (497)
..+.+...|++-+..+|.| ++.|+|||.||--+..++..|.++.. ..++..++.|- |+++.
T Consensus 233 I~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgPp~cvS~ 294 (633)
T PLN02847 233 IAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAPAACMTW 294 (633)
T ss_pred HHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecCchhcCH
Confidence 3444445566666778876 69999999999877666554432221 23456666664 34444
No 163
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=52.28 E-value=28 Score=37.21 Aligned_cols=45 Identities=18% Similarity=0.216 Sum_probs=37.0
Q ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHh
Q 010909 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (497)
+.+|+-.|+.+|++..-.+++.-.+.|+..+|-||.| +|+..+-+
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsG----sLsAW~R~ 191 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSG----SLSAWFRE 191 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchh----HHHHHHHH
Confidence 6678888999999998889986666699999999999 67666543
No 164
>PLN00413 triacylglycerol lipase
Probab=50.72 E-value=22 Score=37.96 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHh
Q 010909 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (497)
Q Consensus 158 d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (497)
++.+.|+++++++|. .+++++|||-||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 567788888888875 379999999999877766666543
No 165
>PLN03037 lipase class 3 family protein; Provisional
Probab=50.47 E-value=37 Score=36.69 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHCCCC-CCCCEEEEeeccccccHHHHHHHHHh
Q 010909 154 KTASDTHTFLLKWFELYPEF-LANPFFIAGESYAGIYVPTLAYEVMK 199 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~-~~~~~yi~GESYgG~yvP~la~~i~~ 199 (497)
.+.+++.+.|++..+.+++. ....++|+|||-||-.+-..|..|..
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~ 341 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAAR 341 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHH
Confidence 45567888888888888753 23469999999999777666666654
No 166
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=50.36 E-value=45 Score=31.99 Aligned_cols=63 Identities=16% Similarity=0.124 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHC--CCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeee-eccCCCCCc
Q 010909 154 KTASDTHTFLLKWFELY--PEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGY-LVGNGVTDE 223 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~--p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi-~iGng~~dp 223 (497)
+.++.+.+.++...+.+ ..-..+++.|.|||.|| .+|+.++...... .-++++| .+|.|...+
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGG----lvar~~l~~~~~~---~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGG----LVARSALSLPNYD---PDSVKTIITLGTPHRGS 126 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhh----HHHHHHHhccccc---cccEEEEEEEcCCCCCc
Confidence 34555555666655554 12245789999999999 6666666532111 1234443 456665544
No 167
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=49.93 E-value=89 Score=24.56 Aligned_cols=78 Identities=22% Similarity=0.194 Sum_probs=46.9
Q ss_pred eeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCCCcccc
Q 010909 60 RNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGL 139 (497)
Q Consensus 60 ~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGf 139 (497)
..||+..++..+. .+.+|+.+.|=-..|.- +.+..... .. +-.+++-+|+. |.|.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r---y~~~a~~L-------------~~------~G~~V~~~D~r-GhG~ 56 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR---YAHLAEFL-------------AE------QGYAVFAYDHR-GHGR 56 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH---HHHHHHHH-------------Hh------CCCEEEEECCC-cCCC
Confidence 4577766554433 68899999987433333 33332222 11 11378889988 9999
Q ss_pred ccccCCCCcccCcHHHHHHHHHHHH
Q 010909 140 SYSENKTDYVTGDLKTASDTHTFLL 164 (497)
Q Consensus 140 S~~~~~~~~~~~~~~~a~d~~~fL~ 164 (497)
|-. ......+-++..+|+..|++
T Consensus 57 S~g--~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 57 SEG--KRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCC--cccccCCHHHHHHHHHHHhC
Confidence 964 33344566677777776653
No 168
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=49.58 E-value=34 Score=35.08 Aligned_cols=59 Identities=24% Similarity=0.318 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 157 ~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
..+.+-++....++| +..++++|+|-||-++...|..|...... ....++=+..|-|-+
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCc
Confidence 345556666667777 45899999999999999999999876532 124455555555544
No 169
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=49.22 E-value=33 Score=33.23 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=37.7
Q ss_pred ceEeecCCCccccccccCCCCcccC-cHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccH
Q 010909 127 SIIYLDSPAGVGLSYSENKTDYVTG-DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYV 190 (497)
Q Consensus 127 nllfiDqPvGtGfS~~~~~~~~~~~-~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yv 190 (497)
.+|-.|-- |.|=|.....+..... .+.+..|+-..|...-+.-| ..|.|..|+||||+-.
T Consensus 59 ~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~ 119 (281)
T COG4757 59 EVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQAL 119 (281)
T ss_pred eEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceee
Confidence 56777766 8887765544433222 22345566666655444444 4699999999999644
No 170
>PLN02934 triacylglycerol lipase
Probab=48.94 E-value=46 Score=35.91 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHh
Q 010909 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (497)
Q Consensus 157 ~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (497)
.++...|+++++++|.+ +++++|||-||-.+-..|..|..
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 45778888889988864 79999999999777666655543
No 171
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=48.41 E-value=44 Score=31.93 Aligned_cols=37 Identities=24% Similarity=0.102 Sum_probs=26.6
Q ss_pred EEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 178 FFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 178 ~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
..|+|.|.|| ..|..+.-.. +=.+.+++.-+|.+++.
T Consensus 117 ~~i~G~S~GG----~~Al~~~l~~------Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 117 RAIAGHSMGG----YGALYLALRH------PDLFGAVIAFSGALDPS 153 (251)
T ss_dssp EEEEEETHHH----HHHHHHHHHS------TTTESEEEEESEESETT
T ss_pred eEEeccCCCc----HHHHHHHHhC------ccccccccccCcccccc
Confidence 8999999999 5555544432 12478888888887765
No 172
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=47.25 E-value=42 Score=34.32 Aligned_cols=61 Identities=20% Similarity=0.251 Sum_probs=42.3
Q ss_pred CcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCC
Q 010909 147 DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 147 ~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~d 222 (497)
.++.++..+++.+.+|-.+-+ .|+..++.|.|.|-||.-+...|.- .-++|++++-.-+-|
T Consensus 286 P~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDAtFDD 346 (517)
T KOG1553|consen 286 PYPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDATFDD 346 (517)
T ss_pred CCcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeecchhh
Confidence 455677777777776655433 4566799999999999877666642 467888887554433
No 173
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=47.10 E-value=41 Score=35.49 Aligned_cols=57 Identities=19% Similarity=-0.002 Sum_probs=43.9
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
.++||+.+|..|.+||....+.+.+.. .+ ..++.+.++ |+ +++|+.++..+.
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~------------------------~~-~~l~~i~~~-~~--~e~~~~~~~~i~ 406 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS------------------------AD-GKLLEIPFK-PV--YRNFDKALQEIS 406 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC------------------------CC-CeEEEccCC-Cc--cCCHHHHHHHHH
Confidence 579999999999999999888655442 12 456777776 33 369999999999
Q ss_pred HHHcC
Q 010909 490 RFLAG 494 (497)
Q Consensus 490 ~fl~g 494 (497)
+||..
T Consensus 407 ~wL~~ 411 (414)
T PRK05077 407 DWLED 411 (414)
T ss_pred HHHHH
Confidence 99853
No 174
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=47.00 E-value=36 Score=31.51 Aligned_cols=64 Identities=17% Similarity=0.019 Sum_probs=38.2
Q ss_pred cccceEeecCCCc--cccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHH
Q 010909 124 KVSSIIYLDSPAG--VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 194 (497)
Q Consensus 124 ~~anllfiDqPvG--tGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la 194 (497)
+.|-|.|++-... ...+-. .. .--+..|.+|..|+..+-..+ -....+-++|||||..-+-..+
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~--~~---~~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~ 127 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA--SP---GYARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAA 127 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc--Cc---hHHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHh
Confidence 6778888854433 222211 11 112355777888888776666 1234799999999996544333
No 175
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=46.96 E-value=23 Score=35.16 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCEEEEeecccc
Q 010909 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAG 187 (497)
Q Consensus 153 ~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG 187 (497)
.+++..|++.+..-....|+=..-++||+|||-|.
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa 120 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGA 120 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccc
Confidence 46788899999998889988655579999999876
No 176
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=46.75 E-value=33 Score=36.92 Aligned_cols=81 Identities=16% Similarity=0.270 Sum_probs=57.0
Q ss_pred HHHHHHhhcCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCC--C
Q 010909 401 KYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVP--E 478 (497)
Q Consensus 401 ~~~~~Ll~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP--~ 478 (497)
+.+....++|=|+|+|+|..|.+++..++.++-+++.=..... ..+ ++.+ +-|..|.|.||--- -
T Consensus 344 pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~------~~~----v~dF---~RlF~vPGm~HC~gG~g 410 (474)
T PF07519_consen 344 PDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGA------LAD----VDDF---YRLFMVPGMGHCGGGPG 410 (474)
T ss_pred cCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccc------ccc----ccce---eEEEecCCCcccCCCCC
Confidence 4566677889999999999999999999999888864110000 001 2222 44677999999854 3
Q ss_pred CCcHHHHHHHHHHHcC
Q 010909 479 YKPREALDFYSRFLAG 494 (497)
Q Consensus 479 DqP~~a~~m~~~fl~g 494 (497)
..|-.++.-+.+|+.+
T Consensus 411 ~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 411 PDPFDALTALVDWVEN 426 (474)
T ss_pred CCCCCHHHHHHHHHhC
Confidence 4666788888889864
No 177
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=45.82 E-value=24 Score=33.18 Aligned_cols=54 Identities=26% Similarity=0.393 Sum_probs=39.0
Q ss_pred ccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhc
Q 010909 136 GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (497)
Q Consensus 136 GtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (497)
|||-|-++-+.+ .++.+.|....++++ ++||.-+ .+.|.|-|+|+ ++|..+..+
T Consensus 70 gVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa----~Ia~~la~r 123 (210)
T COG2945 70 GVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGA----YIAMQLAMR 123 (210)
T ss_pred ccccccCcccCC--cchHHHHHHHHHHHH---hhCCCch--hhhhcccchHH----HHHHHHHHh
Confidence 999998765554 467777777777776 4788643 37999999999 566665554
No 178
>PRK11071 esterase YqiA; Provisional
Probab=45.64 E-value=39 Score=31.32 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=21.6
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHH
Q 010909 160 HTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (497)
Q Consensus 160 ~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~ 195 (497)
.+++.++.+.. ..++++|.|.|.||.++-.+|.
T Consensus 48 ~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~ 80 (190)
T PRK11071 48 AELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQ 80 (190)
T ss_pred HHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHH
Confidence 34445555543 3458999999999965555554
No 179
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=44.06 E-value=1.2e+02 Score=30.77 Aligned_cols=117 Identities=13% Similarity=0.045 Sum_probs=55.9
Q ss_pred CCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHh---hHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEeecCC
Q 010909 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD---GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSP 134 (497)
Q Consensus 58 ~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~---g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP 134 (497)
.+..++=|+...+.....-|.||-+.|..|.+... ..+...|=..+..+.. +-.......... ..+
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~r--Gqg~~~~d~~~~---------~~~ 133 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVR--GQGGRSPDYRGS---------SGG 133 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--T--TTSSSS-B-SSB---------SSS
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCC--CCCCCCCCcccc---------CCC
Confidence 36677666666554456789999999998775432 2355566655554321 100001111111 112
Q ss_pred CccccccccCCCCccc-CcH----HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccH
Q 010909 135 AGVGLSYSENKTDYVT-GDL----KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYV 190 (497)
Q Consensus 135 vGtGfS~~~~~~~~~~-~~~----~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yv 190 (497)
..-|+-.. +... -++ .+..|.+..+ .|+...|++-...+.++|+|-||...
T Consensus 134 ~~~g~~~~----g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~la 189 (320)
T PF05448_consen 134 TLKGHITR----GIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLA 189 (320)
T ss_dssp -SSSSTTT----TTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHH
T ss_pred CCccHHhc----CccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHH
Confidence 22232211 0100 111 1223333333 36677899988899999999999544
No 180
>PLN02162 triacylglycerol lipase
Probab=43.92 E-value=31 Score=36.80 Aligned_cols=39 Identities=10% Similarity=0.141 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHH
Q 010909 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVM 198 (497)
Q Consensus 157 ~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~ 198 (497)
..+.+.|+.++.++|. .+++++|||-||-.+-..|..|.
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHH
Confidence 3455667777888875 47999999999966655555443
No 181
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=42.66 E-value=13 Score=34.61 Aligned_cols=16 Identities=31% Similarity=0.852 Sum_probs=13.8
Q ss_pred CCCCEEEEeCCCCchh
Q 010909 74 SKDPVVLWLNGGPGCS 89 (497)
Q Consensus 74 ~~~PlvlWlnGGPG~S 89 (497)
.+.|-|||+=|||||.
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 3578899999999995
No 182
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=41.37 E-value=20 Score=33.92 Aligned_cols=48 Identities=27% Similarity=0.388 Sum_probs=30.8
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPR 482 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~ 482 (497)
.+++|.+.|..|.+++-..++...+. +.+. ..+.....||.||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~------------------------~~~~-~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEM------------------------FDPD-ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHH------------------------HHHH-EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHh------------------------ccCC-cEEEEECCCCcCcCChhh
Confidence 58999999999999998777766655 2333 667778999999988764
No 183
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=40.50 E-value=88 Score=31.22 Aligned_cols=66 Identities=21% Similarity=0.149 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHCCC--C-CCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeee--eeeeeccCCCCCcc
Q 010909 154 KTASDTHTFLLKWFELYPE--F-LANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN--FKGYLVGNGVTDEE 224 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~--~-~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~in--LkGi~iGng~~dp~ 224 (497)
..|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|.++...- .+.++ |+|.+.|.+..|..
T Consensus 46 ~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~Y----ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 46 SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPSY----APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHHh----CcccccceeEEeccCCccCHH
Confidence 4566666777665555442 2 35789999999998532 3444443321 24688 99999999988764
No 184
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=40.38 E-value=19 Score=37.64 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=21.7
Q ss_pred CEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 177 PFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 177 ~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
.+-++|||||| +-|...+... ..++..++.+||.-|.
T Consensus 229 ~i~~~GHSFGG----ATa~~~l~~d-------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGG----ATALQALRQD-------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHH----HHHHHHHHH--------TT--EEEEES---TTS
T ss_pred heeeeecCchH----HHHHHHHhhc-------cCcceEEEeCCcccCC
Confidence 59999999999 3333333322 3577888999998875
No 185
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=40.04 E-value=34 Score=32.45 Aligned_cols=46 Identities=17% Similarity=0.169 Sum_probs=30.7
Q ss_pred HHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCC
Q 010909 164 LKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (497)
Q Consensus 164 ~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~ 220 (497)
.+|++.+|+...+.+-|.|-|.||-.+-.+|... -.++.++..+|.
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~-----------~~i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRF-----------PQISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS-----------SSEEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC-----------CCccEEEEeCCc
Confidence 3688899999888999999999995555555432 156666665554
No 186
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=39.89 E-value=54 Score=33.41 Aligned_cols=79 Identities=9% Similarity=-0.117 Sum_probs=44.1
Q ss_pred cceEeecCCCccccccccCCCCcccCcHHHH-HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCC
Q 010909 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTA-SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (497)
Q Consensus 126 anllfiDqPvGtGfS~~~~~~~~~~~~~~~a-~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~ 204 (497)
.+++=+|-. |-|.|.. . .+-++.+ +++.+++....+..+ ..++++.|+|+||..+-..+ ...
T Consensus 95 ~~V~~~D~~-g~g~s~~----~--~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~----~~~--- 157 (350)
T TIGR01836 95 QDVYLIDWG-YPDRADR----Y--LTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYA----ALY--- 157 (350)
T ss_pred CeEEEEeCC-CCCHHHh----c--CCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHH----HhC---
Confidence 366667754 4444321 1 1222333 335555555555553 35899999999995443332 222
Q ss_pred CCCeeeeeeeeccCCCCCcc
Q 010909 205 EKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 205 ~~~~inLkGi~iGng~~dp~ 224 (497)
+-.++++++.++.++..
T Consensus 158 ---~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 158 ---PDKIKNLVTMVTPVDFE 174 (350)
T ss_pred ---chheeeEEEeccccccC
Confidence 11478888888777653
No 187
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=39.74 E-value=54 Score=31.92 Aligned_cols=59 Identities=22% Similarity=0.300 Sum_probs=44.3
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
..+|.++.|+.|.+|...-...|-+.. ...+++-+ ...|||-+.+|.+.....+.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t------------------------~~~f~l~~-fdGgHFfl~~~~~~v~~~i~ 230 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHT------------------------KGDFTLRV-FDGGHFFLNQQREEVLARLE 230 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhh------------------------cCCceEEE-ecCcceehhhhHHHHHHHHH
Confidence 588999999999999987555554431 11255444 47799999999999998888
Q ss_pred HHHc
Q 010909 490 RFLA 493 (497)
Q Consensus 490 ~fl~ 493 (497)
+.+.
T Consensus 231 ~~l~ 234 (244)
T COG3208 231 QHLA 234 (244)
T ss_pred HHhh
Confidence 8774
No 188
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=39.11 E-value=18 Score=24.22 Aligned_cols=12 Identities=33% Similarity=1.088 Sum_probs=6.4
Q ss_pred CCEEEEeCCCCc
Q 010909 76 DPVVLWLNGGPG 87 (497)
Q Consensus 76 ~PlvlWlnGGPG 87 (497)
.-=+||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345799999998
No 189
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=38.06 E-value=66 Score=31.70 Aligned_cols=66 Identities=18% Similarity=0.190 Sum_probs=38.3
Q ss_pred CcHHHHHHHHHHHHHHH-HHCCC---CCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 151 GDLKTASDTHTFLLKWF-ELYPE---FLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~-~~~p~---~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
.+.+.+.++.++|.+=+ ...|. -.-..+.|+|||=||+-+-.++.. +... ...+++++++..+|+-
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~----~~~~-~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALG----NASS-SLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhh----hccc-ccccceeEEEEecccc
Confidence 45566677777765522 12221 011369999999999743333322 2111 1247899999988875
No 190
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=37.28 E-value=29 Score=32.91 Aligned_cols=49 Identities=27% Similarity=0.372 Sum_probs=28.0
Q ss_pred cCceEEEEecCCccccCchhHH-HHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecC
Q 010909 409 RGYRALIFSGDHDMCVPFTGSE-AWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTV 476 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~-~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmV 476 (497)
.+-+||+.+|..|.+-|..-.- ..+++|+= .|+ .+ .++.+...+|||++
T Consensus 114 i~~piLli~g~dD~~WpS~~~a~~i~~rL~~---------------~~~--~~--~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 114 IKGPILLISGEDDQIWPSSEMAEQIEERLKA---------------AGF--PH--NVEHLSYPGAGHLI 163 (213)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHHHHHHC---------------TT---------EEEEETTB-S--
T ss_pred cCCCEEEEEeCCCCccchHHHHHHHHHHHHH---------------hCC--CC--cceEEEcCCCCcee
Confidence 3689999999999998876543 45556641 221 11 37888889999995
No 191
>PLN02442 S-formylglutathione hydrolase
Probab=37.20 E-value=47 Score=32.90 Aligned_cols=49 Identities=18% Similarity=0.086 Sum_probs=35.9
Q ss_pred hcCceEEEEecCCccccCch-hHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCC
Q 010909 408 LRGYRALIFSGDHDMCVPFT-GSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVP 477 (497)
Q Consensus 408 ~~~irVLiy~Gd~D~i~n~~-G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP 477 (497)
..+.+|++.+|+.|.+|+.. .++.+.+.++ -+ +...++....+++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~---------------~~------g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACK---------------EA------GAPVTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHH---------------Hc------CCCeEEEEeCCCCccHH
Confidence 35789999999999999974 4666666653 11 12378888999999755
No 192
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=36.38 E-value=51 Score=26.55 Aligned_cols=35 Identities=11% Similarity=0.231 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHh
Q 010909 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (497)
Q Consensus 157 ~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (497)
-++|++.+.|+..| |-.+.|.+.|+|| .+-+.|.+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyr 41 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYR 41 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHH
Confidence 35788899998877 6677899999999 67777765
No 193
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=35.71 E-value=42 Score=30.74 Aligned_cols=43 Identities=21% Similarity=0.531 Sum_probs=33.5
Q ss_pred ceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCC
Q 010909 411 YRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEY 479 (497)
Q Consensus 411 irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~D 479 (497)
++.+++.++.|.+|++.-++.+.+.|+ -.++.+.++||+-..+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~--------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG--------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT---------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC--------------------------CCeEECCCCCCccccc
Confidence 444899999999999999999888864 5688899999997753
No 194
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=35.24 E-value=31 Score=36.09 Aligned_cols=16 Identities=31% Similarity=0.482 Sum_probs=14.4
Q ss_pred EEecCCccccCchhHH
Q 010909 415 IFSGDHDMCVPFTGSE 430 (497)
Q Consensus 415 iy~Gd~D~i~n~~G~~ 430 (497)
++.||=|-.||..+.+
T Consensus 340 v~~~dGDGTVPl~SL~ 355 (389)
T PF02450_consen 340 VIYGDGDGTVPLRSLG 355 (389)
T ss_pred eEECCCCChhhHHHHH
Confidence 7899999999998877
No 195
>PRK14567 triosephosphate isomerase; Provisional
Probab=34.84 E-value=80 Score=31.01 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
+.+.++..++++++.++-+-....+-|. |||.--|.=+..|++.. ++.|+.||.+.+++.
T Consensus 179 e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 179 EQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 6678889999999876521112233333 89998999999998643 699999999999875
No 196
>COG0627 Predicted esterase [General function prediction only]
Probab=33.93 E-value=99 Score=31.44 Aligned_cols=132 Identities=23% Similarity=0.175 Sum_probs=64.0
Q ss_pred CCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCccccc-CCCcccccceEeecCCCccccccccCCCCcccCcH
Q 010909 75 KDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVN-PYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDL 153 (497)
Q Consensus 75 ~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n-~~sW~~~anllfiDqPvGtGfS~~~~~~~~~~~~~ 153 (497)
++--|+|+.+|..|.. =.+.+.++++=..+. ..-.+.-+ -.-+....++-=|+ |+|.|.|+-.+...-.....
T Consensus 52 ~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~---~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~ 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNE--PNVYLLDGLRRQADE---SGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG 125 (316)
T ss_pred CCCCEEEEeCCCCCCC--CceEeccchhhhhhh---cCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC
Confidence 4455667777888874 122333333322110 00111111 22233444454455 68999998544321110111
Q ss_pred HHHHHHHHHHH-----HHHHHCCCCCC-CCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 154 KTASDTHTFLL-----KWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 154 ~~a~d~~~fL~-----~F~~~~p~~~~-~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
.-+.+.||. .+.+.||...+ ..-.|+|.|.||+=+-.+|.+ + .=.++.++=-+|+++|.
T Consensus 126 --~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~----~------pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 --PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALK----H------PDRFKSASSFSGILSPS 190 (316)
T ss_pred --ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhh----C------cchhceecccccccccc
Confidence 233444443 45556764332 257899999999544444432 2 11355555566666665
No 197
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=33.32 E-value=50 Score=30.46 Aligned_cols=83 Identities=13% Similarity=0.187 Sum_probs=48.9
Q ss_pred eEeecCCCccccccccCCCCcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCC
Q 010909 128 IIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKP 207 (497)
Q Consensus 128 llfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~ 207 (497)
+--|+-|+..+.. .|..+..+.++++...|+++..+-|. .+|.|.|-|=|+ .++...+.+.......
T Consensus 42 ~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA----~V~~~~~~~~~l~~~~ 108 (179)
T PF01083_consen 42 VQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGA----MVVGDALSGDGLPPDV 108 (179)
T ss_dssp EEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHH----HHHHHHHHHTTSSHHH
T ss_pred EEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCCC---CCEEEEeccccc----HHHHHHHHhccCChhh
Confidence 3335667666652 22345557788899999999999884 589999999999 5555555441100011
Q ss_pred eeeeee-eeccCCCCCc
Q 010909 208 VLNFKG-YLVGNGVTDE 223 (497)
Q Consensus 208 ~inLkG-i~iGng~~dp 223 (497)
.-++.+ +.+|||.-.+
T Consensus 109 ~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 109 ADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHEEEEEEES-TTTBT
T ss_pred hhhEEEEEEecCCcccC
Confidence 234666 5788887643
No 198
>PRK14566 triosephosphate isomerase; Provisional
Probab=32.53 E-value=84 Score=30.99 Aligned_cols=60 Identities=22% Similarity=0.400 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCcc
Q 010909 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (497)
Q Consensus 154 ~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~ 224 (497)
+.+.++..||++++.+.-.-....+=|. |||.--|.-+..|+... ++.|+.||..-+|+.
T Consensus 189 e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 189 EQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 5578889999999875411111233343 99999999999998643 699999999999874
No 199
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=31.35 E-value=1.1e+02 Score=29.17 Aligned_cols=60 Identities=28% Similarity=0.430 Sum_probs=45.1
Q ss_pred ceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcH---HHHHH
Q 010909 411 YRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPR---EALDF 487 (497)
Q Consensus 411 irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~---~a~~m 487 (497)
.++|+.+|..|.+++..-.+....... +.....+.+.+++|....+.+. .++.-
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 289 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR-----------------------ERPKKLLFVPGGGHIDLYDNPPAVEQALDK 289 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc-----------------------cCCceEEEecCCccccccCccHHHHHHHHH
Confidence 899999999999999887766655532 1136788889999999986665 56666
Q ss_pred HHHHHc
Q 010909 488 YSRFLA 493 (497)
Q Consensus 488 ~~~fl~ 493 (497)
+.+|+.
T Consensus 290 ~~~f~~ 295 (299)
T COG1073 290 LAEFLE 295 (299)
T ss_pred HHHHHH
Confidence 666664
No 200
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=31.31 E-value=2.9e+02 Score=29.99 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=22.6
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeeccccccHHHH
Q 010909 160 HTFLLKWFELYPEFLANPFFIAGESYAGIYVPTL 193 (497)
Q Consensus 160 ~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~l 193 (497)
++++++....|-. ..+++-|+|+|.||..|-.+
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHH
Confidence 4566666666642 34679999999999655443
No 201
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=30.30 E-value=68 Score=30.52 Aligned_cols=101 Identities=26% Similarity=0.312 Sum_probs=60.0
Q ss_pred EEEecCCCCeeEEEEEEecCCCCCCCCEEEEeCCCCchhhHhhHhhhcCCeeeeCCCCCCCCCcccccCCCcccccceEe
Q 010909 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (497)
Q Consensus 51 y~~v~~~~~~~lfy~f~~s~~~~~~~PlvlWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (497)
-+.|+ +.++.|.-+-+. +--||-+-|--||+-.. .+|-..+ .++ -.+ ..++=
T Consensus 25 kv~vn---g~ql~y~~~G~G-----~~~iLlipGalGs~~tD-----f~pql~~------------l~k--~l~-~Tiva 76 (277)
T KOG2984|consen 25 KVHVN---GTQLGYCKYGHG-----PNYILLIPGALGSYKTD-----FPPQLLS------------LFK--PLQ-VTIVA 76 (277)
T ss_pred eeeec---CceeeeeecCCC-----CceeEeccccccccccc-----CCHHHHh------------cCC--CCc-eEEEE
Confidence 34454 677776543322 34577788887887432 2332211 111 111 68999
Q ss_pred ecCCCccccccccCCC---CcccCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccH
Q 010909 131 LDSPAGVGLSYSENKT---DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYV 190 (497)
Q Consensus 131 iDqPvGtGfS~~~~~~---~~~~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yv 190 (497)
+|.| |-|-|...+.. .+-..|.+.|-|+.++|. -.+|-|.|-|=||.-.
T Consensus 77 wDPp-GYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTa 128 (277)
T KOG2984|consen 77 WDPP-GYGTSRPPERKFEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITA 128 (277)
T ss_pred ECCC-CCCCCCCCcccchHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEE
Confidence 9966 88887653321 111456677777777763 3589999999999644
No 202
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=29.35 E-value=83 Score=28.74 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=30.9
Q ss_pred HHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCC
Q 010909 162 FLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (497)
Q Consensus 162 fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~d 222 (497)
++..+-+..... ..+.+|+|||.|.. ++++.+.... ..+++|+++..|+-.
T Consensus 42 W~~~l~~~i~~~-~~~~ilVaHSLGc~---~~l~~l~~~~------~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 42 WVQALDQAIDAI-DEPTILVAHSLGCL---TALRWLAEQS------QKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHCCHC--TTTEEEEEETHHHH---HHHHHHHHTC------CSSEEEEEEES--SC
T ss_pred HHHHHHHHHhhc-CCCeEEEEeCHHHH---HHHHHHhhcc------cccccEEEEEcCCCc
Confidence 444444444443 45899999999994 3334442222 468999999999954
No 203
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=29.22 E-value=35 Score=23.75 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=23.5
Q ss_pred CCCCCccccccCchhhhccCCCCCHHHHHHHHH
Q 010909 218 NGVTDEEIDGNALVPFVHGMGLISDDLYEEVQN 250 (497)
Q Consensus 218 ng~~dp~~q~~~~~~f~~~~gli~~~~~~~~~~ 250 (497)
.|.+||..-..--.+=|+..|+||.+.+..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 477888765544456688999999998876654
No 204
>COG4425 Predicted membrane protein [Function unknown]
Probab=27.03 E-value=83 Score=33.40 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=30.7
Q ss_pred cHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeecccc
Q 010909 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAG 187 (497)
Q Consensus 152 ~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG 187 (497)
-.++|+.+.+.+-.+....|+-..-++|+.|||-|.
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa 408 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGA 408 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEecccccc
Confidence 346788899999999999998776689999999876
No 205
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=26.72 E-value=80 Score=28.95 Aligned_cols=27 Identities=26% Similarity=0.428 Sum_probs=22.0
Q ss_pred CCCCCCEEEEeeccccccHHHHHHHHH
Q 010909 172 EFLANPFFIAGESYAGIYVPTLAYEVM 198 (497)
Q Consensus 172 ~~~~~~~yi~GESYgG~yvP~la~~i~ 198 (497)
.+..-|+.|-|.||||.....+|..+.
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~ 111 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQ 111 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhc
Confidence 455669999999999988888777664
No 206
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=25.68 E-value=1.2e+02 Score=20.57 Aligned_cols=28 Identities=21% Similarity=0.386 Sum_probs=13.8
Q ss_pred eeEEEEEEecCCCCCCCCEEEEeCCCCc
Q 010909 60 RNLFYYFVESEGNPSKDPVVLWLNGGPG 87 (497)
Q Consensus 60 ~~lfy~f~~s~~~~~~~PlvlWlnGGPG 87 (497)
.+-+|||-.+........--+|+.+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 3456667444433333444455555664
No 207
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=24.74 E-value=1.4e+02 Score=30.20 Aligned_cols=61 Identities=25% Similarity=0.267 Sum_probs=42.5
Q ss_pred cCceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHH
Q 010909 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFY 488 (497)
Q Consensus 409 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~ 488 (497)
...+||+..|-.+--++..-..+.... +.+ ..+..+.+|||+|..|+|+...+.+
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~------------------------fp~-~e~~~ld~aGHwVh~E~P~~~~~~i 306 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKI------------------------FPN-VEVHELDEAGHWVHLEKPEEFIESI 306 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHh------------------------ccc-hheeecccCCceeecCCHHHHHHHH
Confidence 456778877777666654422222211 222 5567788899999999999999999
Q ss_pred HHHHcC
Q 010909 489 SRFLAG 494 (497)
Q Consensus 489 ~~fl~g 494 (497)
..|+..
T Consensus 307 ~~Fl~~ 312 (315)
T KOG2382|consen 307 SEFLEE 312 (315)
T ss_pred HHHhcc
Confidence 998853
No 208
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.45 E-value=2.4e+02 Score=27.78 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=32.5
Q ss_pred cCcHHHHHHHHHHHHHHHHHCCCCCCCCEEEEeeccccccHHHHHHHHHhcc
Q 010909 150 TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (497)
Q Consensus 150 ~~~~~~a~d~~~fL~~F~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~ 201 (497)
.+.++.++.-.+.|+ +..|+ -|.+|.|.|+||.-+=.+|.++..+.
T Consensus 45 ~~l~~~a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 45 ASLDDMAAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred CCHHHHHHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCC
Confidence 355566766666665 46665 39999999999976666777766543
No 209
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=23.95 E-value=25 Score=19.63 Aligned_cols=9 Identities=11% Similarity=0.209 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q 010909 12 LACYTLLSF 20 (497)
Q Consensus 12 ~~~~~~~~~ 20 (497)
+.++++|++
T Consensus 5 vIIlvvLLl 13 (19)
T PF13956_consen 5 VIILVVLLL 13 (19)
T ss_pred hHHHHHHHh
Confidence 333333333
No 210
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=23.49 E-value=26 Score=34.96 Aligned_cols=62 Identities=23% Similarity=0.344 Sum_probs=41.6
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEEEEEcCceecCCCCCcHHHHHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYS 489 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltfv~V~~AGHmVP~DqP~~a~~m~~ 489 (497)
+.+||++.|+.-.-.. .+...-.+|+ ..+=|++.|.++|=||-.+||....+-|+
T Consensus 219 ~c~vLlvvG~~Sp~~~--~vv~~ns~Ld-----------------------p~~ttllkv~dcGglV~eEqP~klaea~~ 273 (283)
T PF03096_consen 219 GCPVLLVVGDNSPHVD--DVVEMNSKLD-----------------------PTKTTLLKVADCGGLVLEEQPGKLAEAFK 273 (283)
T ss_dssp CS-EEEEEETTSTTHH--HHHHHHHHS------------------------CCCEEEEEETT-TT-HHHH-HHHHHHHHH
T ss_pred CCCeEEEEecCCcchh--hHHHHHhhcC-----------------------cccceEEEecccCCcccccCcHHHHHHHH
Confidence 3888999998743322 1223334442 12489999999999999999999999999
Q ss_pred HHHcCCC
Q 010909 490 RFLAGKP 496 (497)
Q Consensus 490 ~fl~g~~ 496 (497)
-|++|..
T Consensus 274 lFlQG~G 280 (283)
T PF03096_consen 274 LFLQGMG 280 (283)
T ss_dssp HHHHHTT
T ss_pred HHHccCC
Confidence 9998753
No 211
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=22.61 E-value=73 Score=30.54 Aligned_cols=43 Identities=19% Similarity=0.151 Sum_probs=27.8
Q ss_pred HCCCCCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCC
Q 010909 169 LYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (497)
Q Consensus 169 ~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~ 221 (497)
.....-.+.+|++|.|-|| .++..|.-.. +=-+.++++.+|..
T Consensus 90 ~~~~iD~~RVyv~G~S~Gg----~ma~~la~~~------pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 90 ARYNIDPSRVYVTGLSNGG----MMANVLACAY------PDLFAAVAVVSGVP 132 (220)
T ss_pred hhcccCCCceeeEEECHHH----HHHHHHHHhC------CccceEEEeecccc
Confidence 3335667899999999999 4454444322 12467777776653
No 212
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=22.34 E-value=45 Score=34.74 Aligned_cols=62 Identities=26% Similarity=0.437 Sum_probs=34.3
Q ss_pred CCCEEEEeCCCCch--hhHhhHhhhcCCeeeeCCCCCCC-CCcccccCCCcccccceEeecCCCccc
Q 010909 75 KDPVVLWLNGGPGC--SSFDGFIYEHGPFNFEAPTTKGS-LPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (497)
Q Consensus 75 ~~PlvlWlnGGPG~--SS~~g~f~E~GP~~~~~~~~~~~-~~~l~~n~~sW~~~anllfiDqPvGtG 138 (497)
+.|+=|=+.|-+|+ ||++-.|-.+|+=.-.... ++. ..+.+..+|.=-+..|+.++|-| |+|
T Consensus 33 ~~~l~IaV~G~sGsGKSSfINalrGl~~~d~~aA~-tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 33 NAPLNIAVTGESGSGKSSFINALRGLGHEDEGAAP-TGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp H--EEEEEEESTTSSHHHHHHHHTT--TTSTTS---SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred cCceEEEEECCCCCCHHHHHHHHhCCCCCCcCcCC-CCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 46788888887765 7888778777773211100 000 12456667777788999999999 887
No 213
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=22.26 E-value=1.6e+02 Score=29.74 Aligned_cols=70 Identities=10% Similarity=-0.001 Sum_probs=39.5
Q ss_pred CcHHHHHHHHHHHHHHHHHCCC-CCCCCEEEEeeccccccHHHHHHHHHhcccCCCCCeeeeeeeeccCCCCCccc
Q 010909 151 GDLKTASDTHTFLLKWFELYPE-FLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (497)
Q Consensus 151 ~~~~~a~d~~~fL~~F~~~~p~-~~~~~~yi~GESYgG~yvP~la~~i~~~~~~~~~~~inLkGi~iGng~~dp~~ 225 (497)
+-++.++++-+.++-+-..... ....++.|+|||=|-. -+.+++...+... ....++|+++-.|+-|.+.
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQ---dvl~Yl~~~~~~~--~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQ---DVLHYLSSPNPSP--SRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHH---HHHHHHHH-TT-----CCCEEEEEEEEE---TTS
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcH---HHHHHHhccCccc--cccceEEEEEeCCCCChhH
Confidence 4456677777777666555432 3446899999999985 3444444433211 1467999999999888653
No 214
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=21.96 E-value=35 Score=23.56 Aligned_cols=18 Identities=17% Similarity=-0.018 Sum_probs=14.1
Q ss_pred hHhhccCcHHHHHhhCCC
Q 010909 358 VATLWLNDAAVRTAIHAE 375 (497)
Q Consensus 358 ~~~~ylN~~~Vr~aL~v~ 375 (497)
.+-.-|++||||++|++=
T Consensus 15 gl~~~l~DpdvqrgL~~l 32 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGFL 32 (42)
T ss_pred HHHHHHcCHHHHHHHHHH
Confidence 344569999999999863
No 215
>PRK07868 acyl-CoA synthetase; Validated
Probab=21.88 E-value=1.4e+02 Score=35.36 Aligned_cols=59 Identities=15% Similarity=0.126 Sum_probs=44.0
Q ss_pred CceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEecCceEE-EEEcCceecCC---CCCcHHHH
Q 010909 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTF-LTIKGAGHTVP---EYKPREAL 485 (497)
Q Consensus 410 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~~~Ltf-v~V~~AGHmVP---~DqP~~a~ 485 (497)
..++|+..|..|.+++....+.+.+.+. + ..+ ..+.++|||.+ ..-|+...
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~------------------------~-a~~~~~~~~~GH~g~~~g~~a~~~~w 351 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP------------------------N-AEVYESLIRAGHFGLVVGSRAAQQTW 351 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------C-CeEEEEeCCCCCEeeeechhhhhhhC
Confidence 5899999999999999988887766532 1 333 45679999954 34566677
Q ss_pred HHHHHHHc
Q 010909 486 DFYSRFLA 493 (497)
Q Consensus 486 ~m~~~fl~ 493 (497)
..+.+||.
T Consensus 352 p~i~~wl~ 359 (994)
T PRK07868 352 PTVADWVK 359 (994)
T ss_pred hHHHHHHH
Confidence 77888876
No 216
>KOG2682 consensus NAD-dependent histone deacetylases and class I sirtuins (SIR2 family) [Chromatin structure and dynamics; Transcription]
Probab=21.34 E-value=37 Score=32.74 Aligned_cols=68 Identities=29% Similarity=0.561 Sum_probs=42.4
Q ss_pred ccceEeecCCCccccccccCCCCcccCcHHHHHHHH---------HHHHHHHHHCCCCCCCCEE-EEeeccccccHHHHH
Q 010909 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTH---------TFLLKWFELYPEFLANPFF-IAGESYAGIYVPTLA 194 (497)
Q Consensus 125 ~anllfiDqPvGtGfS~~~~~~~~~~~~~~~a~d~~---------~fL~~F~~~~p~~~~~~~y-i~GESYgG~yvP~la 194 (497)
..-+++. ||.|-|.+..-.++.+-.+..-+++. -|=..||+++|+ ||| |+-|=|-|+|=|.+.
T Consensus 36 ~~rVi~m---VGAGISTsaGIPDFRSP~tGlY~NLqr~~LPYpEAiFel~yF~~nP~----PF~tLAkELyPgnfkPt~~ 108 (314)
T KOG2682|consen 36 CRRVIVM---VGAGISTSAGIPDFRSPGTGLYDNLQRYHLPYPEAIFELSYFKKNPE----PFFTLAKELYPGNFKPTIT 108 (314)
T ss_pred cceEEEE---ecCccccccCCCCCCCCCchhhhhHHHhcCCChhhhhccHHhhcCCc----hHHHHHHHhCCCCcCchhH
Confidence 3456664 59999987665555433333222221 122345666653 655 778899999999999
Q ss_pred HHHHh
Q 010909 195 YEVMK 199 (497)
Q Consensus 195 ~~i~~ 199 (497)
++++.
T Consensus 109 HYflr 113 (314)
T KOG2682|consen 109 HYFLR 113 (314)
T ss_pred HHHHH
Confidence 98876
No 217
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=20.10 E-value=83 Score=33.58 Aligned_cols=73 Identities=22% Similarity=0.230 Sum_probs=45.3
Q ss_pred ceEEEEecCCccccCchhHHHHHhhcCCCCCccceeeEeCCeeceEEEEec--CceEEEEEcCce---ecCCCCCcHHHH
Q 010909 411 YRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYE--NNLTFLTIKGAG---HTVPEYKPREAL 485 (497)
Q Consensus 411 irVLiy~Gd~D~i~n~~G~~~~i~~L~w~~~~~~~~w~~~~~~aGyvk~~~--~~Ltfv~V~~AG---HmVP~DqP~~a~ 485 (497)
++--++.||=|-.+|..+. .+-. .|++.+.+ .++ + +.+.+. .-+.++...|+- |+--.-.+ +++
T Consensus 374 ~~~~~~~~DGDgTVp~~S~-~~c~--~w~g~~~~-----~~~-~-~~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~-~l~ 442 (473)
T KOG2369|consen 374 LKGGIFYGDGDGTVPLVSA-SMCA--NWQGKQFN-----AGI-A-VTREEDKHQPVNLDESHGSSSAEHVDILGDE-ELL 442 (473)
T ss_pred ccCceeecCCCCccchHHH-Hhhh--hhhccccc-----ccc-c-cccccccCCCccccccCCccchhhhhhccCh-HHH
Confidence 5555889999999999988 4444 78876643 222 2 222221 127777777776 76555555 555
Q ss_pred HHHHHHHcC
Q 010909 486 DFYSRFLAG 494 (497)
Q Consensus 486 ~m~~~fl~g 494 (497)
+.+.+.+.+
T Consensus 443 e~i~k~~~g 451 (473)
T KOG2369|consen 443 EEILKVLLG 451 (473)
T ss_pred HHHHHHhcc
Confidence 666666655
Done!