BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010911
(497 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86K80|U420_DICDI UPF0420 protein OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3
SV=1
Length = 527
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 13/259 (5%)
Query: 109 NVVKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTAA 168
NV+ + LP G+P SV+ DY GY + I + T ++LK G+ S T A+
Sbjct: 57 NVLCELFLPNGYPDSVTTDYFGYQFWDSIQALCSTITGTLATRAILKGYGVGDSSATVAS 116
Query: 169 ASAAAIKWISKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPA 228
A+ +W+ +DG+G +GR+ R G D + K+WR AD + + G F++ + ++ +
Sbjct: 117 ATT---QWLIRDGMGMIGRIVFAWRKGTDLDCNSKKWRYTADILNNIGMAFEMISPLFSS 173
Query: 229 -YFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLGEVAAKEEVWEVSAQLFGLALG 287
FLPL+ +G ++K++ + + HFA NL +V+AK+ E + L G+ L
Sbjct: 174 QLFLPLSCIGLIAKSICGVAGGCTKASLTQHFAKRDNLADVSAKDGSQETAVNLVGMLLS 233
Query: 288 ILILDTPGLVRLYPVLSLTWLSIRL---VHLWLRYQSLSVLQFNTINLKRARILVKSHVL 344
+++ + L +TWL +HL+ Y+++S +Q +IN RA L+ + +
Sbjct: 234 VIV---SSFINDNTSLIVTWLVFLFFTSLHLFCNYRAVSAVQLKSINRYRAY-LIYDYFI 289
Query: 345 HT--SVPGCVDCNKEENIL 361
H S+P + +K ENIL
Sbjct: 290 HNQGSIPSPSEISKLENIL 308
>sp|Q5R8F6|CP058_PONAB UPF0420 protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1
Length = 468
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 184/396 (46%), Gaps = 38/396 (9%)
Query: 111 VKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTAAAS 170
++ LP GFP SVS DYL Y L + ++ T ++L +G+ + T +AA+
Sbjct: 73 LQAVFLPQGFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAAT 132
Query: 171 AAAIKWISKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYF 230
A W+ KD G +GR+ G+ D + KQWR++AD + ++ VYP F
Sbjct: 133 AT---WLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICF 189
Query: 231 LPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLGEVAAKEEVWEVSAQLFGLALGILI 290
S NL+K + + + H A N+ +V+AK+ E L GL + +L+
Sbjct: 190 TMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLVGLLVSLLM 249
Query: 291 LDTPGLVRLYPVLSL-TWLSIRLVHLWLRYQSLSVLQFNTINLKRARILVKSHVLHTSVP 349
L V P SL + + +H++ Y+++ L T+N R R+++K ++ V
Sbjct: 250 LPL---VSGCPGFSLGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVL 306
Query: 350 GCVDCNKEENILTWEKFMK-PQIIFGVPLEDMVGGDTSVFKVKKLIRIYAKEKYILMVNQ 408
N+ E + W F P + GVPL +V +SVF++++L+ + +E Y+L +Q
Sbjct: 307 NPTAANRMEPL--WTGFWPAPSLSLGVPLHRLV---SSVFELQQLVEGH-QEPYLLCWDQ 360
Query: 409 SAGDFEVFVSFKVGATSLSVLRSVW----------------QVYWLHENRESFDNLSDWL 452
S +V ++ K G ++LR+ ++ L ++ W+
Sbjct: 361 SRNQVQVVLNQKAGPK--TILRAATHGLMLGALQGDGPLPAELEELRNRVQAGPKKESWV 418
Query: 453 ----SHSLLVMEDRFDDFIQQLKGAGWNTHQLNLKV 484
+H +L M F F++ L+ AGW T + L+V
Sbjct: 419 IVKETHEVLDM--LFPKFLKGLQDAGWKTEKHQLEV 452
>sp|Q96GQ5|CP058_HUMAN UPF0420 protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2
Length = 468
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 182/396 (45%), Gaps = 38/396 (9%)
Query: 111 VKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTAAAS 170
++ LP GFP SVS DYL Y L + ++ T ++L +G+ + T +AA+
Sbjct: 73 LQAVFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAAT 132
Query: 171 AAAIKWISKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYF 230
A W+ KD G +GR+ G+ D + KQWR++AD + ++ VYP F
Sbjct: 133 AT---WLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICF 189
Query: 231 LPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLGEVAAKEEVWEVSAQLFGLALGILI 290
S NL+K + + + H A N+ +V+AK+ E L LA ++
Sbjct: 190 TMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQET---LVNLAGLLVS 246
Query: 291 LDTPGLVRLYPVLSL-TWLSIRLVHLWLRYQSLSVLQFNTINLKRARILVKSHVLHTSVP 349
L LV P SL + + +H++ Y+++ L T+N R R+++K ++ V
Sbjct: 247 LLMLPLVSGCPGFSLGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVL 306
Query: 350 GCVDCNKEENILTWEKFMK-PQIIFGVPLEDMVGGDTSVFKVKKLIRIYAKEKYILMVNQ 408
N+ E + W F P + GVPL +V +SVF++++L+ + +E Y+L +Q
Sbjct: 307 DPTAANRMEPL--WTGFWPAPSLSLGVPLHRLV---SSVFELQQLVEGH-QESYLLCWDQ 360
Query: 409 SAGDFEVFVSFKVGATSLSVLRSVW----------------QVYWLHENRESFDNLSDWL 452
S +V ++ K G ++LR+ ++ L + W+
Sbjct: 361 SQNQVQVVLNQKAGPK--TILRAATHGLMLGALQGDGPLPAELEELRNRVRAGPKKESWV 418
Query: 453 ----SHSLLVMEDRFDDFIQQLKGAGWNTHQLNLKV 484
+H +L M F F++ L+ AGW T + L+V
Sbjct: 419 VVKETHEVLDM--LFPKFLKGLQDAGWKTEKHQLEV 452
>sp|Q91W34|CP058_MOUSE UPF0420 protein C16orf58 homolog OS=Mus musculus PE=2 SV=1
Length = 466
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 185/395 (46%), Gaps = 36/395 (9%)
Query: 111 VKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTAAAS 170
++ LLP GFP SVS DYL Y L + ++ T ++L+ +G+ + A+ S
Sbjct: 71 LRSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGN---AKASVS 127
Query: 171 AAAIKWISKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYF 230
AA W+ KD G +GR+ + G+ D + KQWR++AD + ++ +YP +F
Sbjct: 128 AATSTWLVKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFF 187
Query: 231 LPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLGEVAAKEEVWEVSAQLFGLALGILI 290
S NL+K + + + H A N+ +V+AK+ E L GL + +L+
Sbjct: 188 TMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLM 247
Query: 291 LDTPGLVRLYPVLSL-TWLSIRLVHLWLRYQSLSVLQFNTINLKRARILVKSHVLHTSVP 349
L V P LSL ++ + +H++ Y+++ L T+N R +++++ + V
Sbjct: 248 LPL---VSDCPSLSLGCFVLLTALHIYANYRAVRALVLETLNESRLQLVLEHFLQRGEVL 304
Query: 350 GCVDCNKEENILT--WEKFMKPQIIFGVPLEDMVGGDTSVFKVKKLIRIYAKEKYILMVN 407
N+ E + T W + GVPL +V +SV ++K+L+ + E Y+L N
Sbjct: 305 EPASANQMEPLWTGFWPSL---SLSLGVPLHHLV---SSVSELKQLVEGH-HEPYLLCWN 357
Query: 408 QSAGDFEVFVSFKVGATSLSVLRSVW----------------QVYWLHENRESFDNLSDW 451
+S +V +S + G +VLR+ ++ L ++ W
Sbjct: 358 KSRNQVQVALSQEAGPE--TVLRAATHGLILGALQEDGPLPGELAELRHQVQADPKKESW 415
Query: 452 L--SHSLLVMEDRFDDFIQQLKGAGWNTHQLNLKV 484
+ + V++ F F++ L+ AGW T + +L+V
Sbjct: 416 ILVRETHQVLDTLFPKFLKGLQAAGWKTEKHHLEV 450
>sp|Q499P8|CP058_RAT UPF0420 protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 466
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 177/409 (43%), Gaps = 64/409 (15%)
Query: 111 VKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTAAAS 170
++ LLP GFP SVS DYL Y L + ++ T ++L+ +G+ + A+ S
Sbjct: 71 LRSVLLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGN---AKASVS 127
Query: 171 AAAIKWISKDGIGAVGRLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYF 230
AA W+ KD G +GR+ G+ D + KQWR++AD + ++ +YP +F
Sbjct: 128 AATSTWLVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFF 187
Query: 231 LPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLGEVAAKEEVWEVSAQLFG------- 283
S NL+K + + + H A N+ +V+AK+ E L G
Sbjct: 188 TMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLM 247
Query: 284 ---------LALGILILDTPGLVRLYPVLSLTWLSIRLVHLWLRYQSLSVLQFNTINLKR 334
L+LG IL T +H++ Y+++ L T+N R
Sbjct: 248 LPLVSDCLSLSLGCFILLTA------------------LHIYANYRAVRALVLETLNESR 289
Query: 335 ARILVKSHVLHTSVPGCVDCNKEENILTWEKFMKP-QIIFGVPLEDMVGGDTSVFKVKKL 393
++++K + V N+ E + W F + GVPL +V +SV ++K+L
Sbjct: 290 LQLVLKHFLQRGEVLEPASANQMEPL--WTGFWPSLSLSLGVPLHHLV---SSVSELKQL 344
Query: 394 IRIYAKEKYILMVNQSAGDFEVFVSFKVGATSLSVLRSVWQVYWLHENRE------SFDN 447
+ + +E Y+L NQS +V +S G +VLR+ L +E
Sbjct: 345 VEGH-QEPYLLCWNQSQNQVQVALSQVAGPE--TVLRAATHGLILGALQEDGPLPGELAE 401
Query: 448 LSD----------WL--SHSLLVMEDRFDDFIQQLKGAGWNTHQLNLKV 484
L D W+ + V++ F F++ L+ AGW T + +L+V
Sbjct: 402 LRDMVQAGPKNESWILVRETHQVLDTLFPKFLKGLQAAGWKTEKHHLEV 450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,749,460
Number of Sequences: 539616
Number of extensions: 7829902
Number of successful extensions: 17062
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17046
Number of HSP's gapped (non-prelim): 5
length of query: 497
length of database: 191,569,459
effective HSP length: 122
effective length of query: 375
effective length of database: 125,736,307
effective search space: 47151115125
effective search space used: 47151115125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)