Query 010911
Match_columns 497
No_of_seqs 191 out of 280
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 05:57:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010911.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010911hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4249 Uncharacterized conser 100.0 9.6E-94 2.1E-98 731.1 26.4 378 107-496 14-408 (408)
2 PF04884 DUF647: Vitamin B6 ph 100.0 5.2E-86 1.1E-90 651.4 19.2 238 107-349 13-250 (250)
3 KOG4249 Uncharacterized conser 77.5 0.98 2.1E-05 48.4 0.9 72 110-188 126-198 (408)
4 PF05977 MFS_3: Transmembrane 36.0 1.1E+02 0.0025 34.0 7.6 109 183-291 54-163 (524)
5 PRK08633 2-acyl-glycerophospho 30.4 4.1E+02 0.0089 31.6 11.4 104 186-291 59-163 (1146)
6 COG3736 VirB8 Type IV secretor 21.1 2.8E+02 0.0062 28.2 6.7 51 390-440 61-113 (239)
7 PRK06814 acylglycerophosphoeth 20.5 8.7E+02 0.019 29.1 11.7 109 182-292 60-169 (1140)
8 PRK02047 hypothetical protein; 18.0 4.4E+02 0.0096 22.6 6.3 49 389-437 32-82 (91)
9 PF06757 Ins_allergen_rp: Inse 16.0 1.1E+02 0.0023 29.2 2.3 22 459-480 154-175 (179)
10 KOG0718 Molecular chaperone (D 15.6 2.1E+02 0.0044 32.2 4.5 71 418-489 16-100 (546)
No 1
>KOG4249 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=9.6e-94 Score=731.11 Aligned_cols=378 Identities=39% Similarity=0.572 Sum_probs=341.9
Q ss_pred hhHHHHHhhcCCCCCCCcCcccccccccccchhHHHHHHHHHHHHHHHhHhcccCCCCcchhhHHHHHHHHHHhhhhhhh
Q 010911 107 LPNVVKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTAAASAAAIKWISKDGIGAVG 186 (497)
Q Consensus 107 l~~~l~~~FLP~GYP~SVs~dYl~Y~~w~~~q~~~s~~~~vLstqalL~~vGVG~~~~~~A~~~AAal~WVLKDg~G~lg 186 (497)
+...+..++.|.|||+||++||++|+.|+.+|+|+|.++++|+|||+|.++|+| +|+++|||++||+|||+|++|
T Consensus 14 ~~~l~~~~~~p~gfP~Svn~~yl~y~~wr~vq~f~s~~~gvl~tqSll~~~g~~-----~a~~sAaai~WvlKDg~G~lg 88 (408)
T KOG4249|consen 14 PGKLLSTFLPPEGFPKSVNSSYLPYLLWRAVQHFASALSGVLATQSLLAAVGAG-----IAAASAAAIRWVLKDGIGDLG 88 (408)
T ss_pred hhhhhhhhcCCcCCCCcCCccccchhhhHHHHHHHhhhhhhhhhHHHHhhhccc-----ccchhhhHhhhhhhcccchhh
Confidence 445567788888999999999999999999999999999999999999999999 356889999999999999999
Q ss_pred hhhhccccCCccCCCCCceehhHHHHhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHhhhcccchhhHHHhhhcccCccc
Q 010911 187 RLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLG 266 (497)
Q Consensus 187 ~ilfa~~~G~~~D~d~K~wRl~AD~lnd~a~~lElltP~~P~~Fl~la~lan~~K~vA~g~~~aS~aai~~hFA~~~Nla 266 (497)
+|+|+++ |++||+|||+||++||+|+|+|+++|++||+||++||+++|.+|++|+||.++..|+|++|++|||+++|+|
T Consensus 89 kll~~~~-G~~fD~~pKqwR~~aD~l~~lg~g~elatp~~P~~Fl~~a~t~N~ak~va~v~~~atrs~i~~~fA~~~N~~ 167 (408)
T KOG4249|consen 89 KLLCADE-GSKFDDDPKQWRLLADLLWDLGRGLELATPLYPHFFLPLASTGNLAKYVAAVALHATRSPIYQHFAKQGNFG 167 (408)
T ss_pred hhhhccc-ccccCCCHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhhhhhhhHHHHHHHHHccchHhHHHHHHHhhccHH
Confidence 9999888 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhcCCccccchhHHHHHHHHHHHHHHHHhhhhccccccccccHHHHHHHHHHHHhcC
Q 010911 267 EVAAKEEVWEVSAQLFGLALGILILDTPGLVRLYPVLSLTWLSIRLVHLWLRYQSLSVLQFNTINLKRARILVKSHVLHT 346 (497)
Q Consensus 267 DVsAK~~SQet~~~LlG~~~Gi~l~~~~~~~~s~~~~~~~~~~l~~lHl~~nY~avr~v~l~TLN~~R~~iv~~~~~~~g 346 (497)
||.||+|||+|+++++|+++||.+++.++... +..+.+|.+++.+|||+||++||+|+|+|||++|++||+++|+++|
T Consensus 168 dV~Akges~~~~~~laG~g~gili~~~i~~~~--~~~l~~f~ils~~hly~~yq~~r~i~l~TLN~~R~~live~~l~~g 245 (408)
T KOG4249|consen 168 DVGAKGESQSTASNLAGLGFGILILGRIGACK--PLPLVTFGILSTVHLYSNYQSLRHIQLNTLNPDRLRLIVESYLKTG 245 (408)
T ss_pred HHhhhhhHHHHHHHHHHhHHHHHhcCcccCCC--CcceeeehhhHHHHHHHHHHhhheeeeeccCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998765444 4445667889999999999999999999999999999999999999
Q ss_pred CCCCcccccccCccc-cccccCCCceEeccchhhhhcC-CCCHHHHHHHHHhcCCCCEEEEEeccCCceEEEEEecCCCC
Q 010911 347 SVPGCVDCNKEENIL-TWEKFMKPQIIFGVPLEDMVGG-DTSVFKVKKLIRIYAKEKYILMVNQSAGDFEVFVSFKVGAT 424 (497)
Q Consensus 347 ~Vpsp~~vn~~E~il-~~~~~~~~~i~lG~sl~~~~~~-~~s~~~l~~Ll~~f~~E~YlL~~~~~~~~~~v~VvLk~~At 424 (497)
+||+|.|+|++|+|+ .|.+...++|++|++++++... ..+.++...+.+.|.+|+|++...+ .+++|+||++||
T Consensus 246 ~VPsp~e~n~~E~i~~~~~~~~~~~I~~G~~l~~a~~~~~~~~~~~~~l~~~~~~e~~~lt~~K----~~~~v~Lk~~At 321 (408)
T KOG4249|consen 246 QVPSPAEVNEEEPIFGSRPSADAWPIRLGVLLHKAVSDTLSSMSMQQLLFGYFETEKLILTGFK----GGFVVVLKEGAT 321 (408)
T ss_pred CCCChhhhhhhcccccccccccCcCeeeccchhhhhccccccHHHHHHHHHHHHHhheeeccCC----CcEEEEEecCCC
Confidence 999999999999999 6777777889999999999873 2345666778889999999987653 379999999999
Q ss_pred hHHHHHHHHHHHHHhhhccC--------------ccchHHHHHHHHHHHHHhHHHHHHHHHhCCcccCcccccCCCc-cc
Q 010911 425 SLSVLRSVWQVYWLHENRES--------------FDNLSDWLSHSLLVMEDRFDDFIQQLKGAGWNTHQLNLKVPKE-IS 489 (497)
Q Consensus 425 ~~D~LkA~~hA~~L~~~~~~--------------~~~~~~~l~eS~~~~~~~f~~Fl~~L~~~GW~td~~~L~~~~~-~~ 489 (497)
|+|+||+.||++||.+++.. .+++..+++||+++|++.|.+|+++++++||.|++.+|+++.+ +.
T Consensus 322 s~DvLr~l~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~esld~~~~~f~~fl~~~~~~GW~t~~~ll~~~~~~~~ 401 (408)
T KOG4249|consen 322 SVDVLRSLFQACYLYKLMGASRTKRSYLPASKKTLDDVTLRLHESLDMMRDKFIAFLSQMQEQGWITEESLLSPGEQRRY 401 (408)
T ss_pred hHHHHHHHHHHHHHHHHhcCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhccceeehhhcCCcceEEE
Confidence 99999999999999886432 2345678999999999999999999999999999999997777 44
Q ss_pred cccCCCC
Q 010911 490 IDEVGPL 496 (497)
Q Consensus 490 ~~~~~~~ 496 (497)
+-+.+|+
T Consensus 402 ~~~~~~~ 408 (408)
T KOG4249|consen 402 IFDKNPL 408 (408)
T ss_pred eecccCC
Confidence 5554553
No 2
>PF04884 DUF647: Vitamin B6 photo-protection and homoeostasis; InterPro: IPR006968 This is a family of proteins of unknown function, restricted to eukaryotes.
Probab=100.00 E-value=5.2e-86 Score=651.37 Aligned_cols=238 Identities=37% Similarity=0.669 Sum_probs=228.3
Q ss_pred hhHHHHHhhcCCCCCCCcCcccccccccccchhHHHHHHHHHHHHHHHhHhcccCCCCcchhhHHHHHHHHHHhhhhhhh
Q 010911 107 LPNVVKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTAAASAAAIKWISKDGIGAVG 186 (497)
Q Consensus 107 l~~~l~~~FLP~GYP~SVs~dYl~Y~~w~~~q~~~s~~~~vLstqalL~~vGVG~~~~~~A~~~AAal~WVLKDg~G~lg 186 (497)
+.+.++++|||+|||+||||||++||+||++|+|+|+++++|+|||||+|+|||++ +|+|+|||++||||||+||+|
T Consensus 13 ~~~~l~~~fLP~GyP~SVs~dY~~y~~w~~~q~~~s~~~~vlstqalL~~vGvG~~---~a~~~aAa~~wvlKDg~G~lg 89 (250)
T PF04884_consen 13 LQQRLRDVFLPAGYPDSVSPDYLRYQIWDFLQAFASSISGVLSTQALLKAVGVGDA---SASPLAAALNWVLKDGLGMLG 89 (250)
T ss_pred HHHHHHHHhCCCCCCCCcCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCC---CCCHHHHHHHHHHHHhHHHHH
Confidence 67889999999999999999999999999999999999999999999999999985 577999999999999999999
Q ss_pred hhhhccccCCccCCCCCceehhHHHHhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHhhhcccchhhHHHhhhcccCccc
Q 010911 187 RLFIGGRFGNLFDDDPKQWRMYADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGNLG 266 (497)
Q Consensus 187 ~ilfa~~~G~~~D~d~K~wRl~AD~lnd~a~~lElltP~~P~~Fl~la~lan~~K~vA~g~~~aS~aai~~hFA~~~Nla 266 (497)
+|+||+++|++||+|||+|||+||++||+|+++|++||+||++|++++|++|++|+|++.+..++|++|++|||++||+|
T Consensus 90 ~ilfa~~~g~~~D~d~K~wRl~ad~l~d~a~~lEl~tP~~P~~fl~la~~a~~~k~v~~va~gaTraai~~hfA~~~Nla 169 (250)
T PF04884_consen 90 RILFAWRFGSSFDSDPKRWRLVADVLNDAAMILELLTPLFPQYFLPLACLANVAKAVCGVAGGATRAAITQHFARRNNLA 169 (250)
T ss_pred HHHhhhcccccccccchhHhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhhCcHH
Confidence 99999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhcCCccccchhHHHHHHHHHHHHHHHHhhhhccccccccccHHHHHHHHHHHHhcC
Q 010911 267 EVAAKEEVWEVSAQLFGLALGILILDTPGLVRLYPVLSLTWLSIRLVHLWLRYQSLSVLQFNTINLKRARILVKSHVLHT 346 (497)
Q Consensus 267 DVsAK~~SQet~~~LlG~~~Gi~l~~~~~~~~s~~~~~~~~~~l~~lHl~~nY~avr~v~l~TLN~~R~~iv~~~~~~~g 346 (497)
||+|||+||||+++|+||++|+++++..+ .+....+.+|++++++|||+||++||+|+|+|||+||++|++++|+++|
T Consensus 170 Dv~AK~~sQet~~~LlG~~~Gi~l~~~~~--~~~~~~~~~f~~l~~~Hl~~ny~avr~v~l~TLN~~R~~i~~~~~l~~g 247 (250)
T PF04884_consen 170 DVTAKDGSQETAANLLGMLLGIFLSSLVS--GSPSAVWIAFIILSALHLYCNYKAVRAVQLRTLNRQRLEILLEEFLRTG 247 (250)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhc--cCchHHHHHHHHHHHHHHHHHHHHhhcccccCcCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999987532 3566677888999999999999999999999999999999999999999
Q ss_pred CCC
Q 010911 347 SVP 349 (497)
Q Consensus 347 ~Vp 349 (497)
+||
T Consensus 248 ~V~ 250 (250)
T PF04884_consen 248 RVP 250 (250)
T ss_pred CCC
Confidence 997
No 3
>KOG4249 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.48 E-value=0.98 Score=48.38 Aligned_cols=72 Identities=17% Similarity=0.136 Sum_probs=60.5
Q ss_pred HHHHhhcCCCCCCCcCcccccccccccchhHHHHHHHHHHHHHHHhHhc-ccCCCCcchhhHHHHHHHHHHhhhhhhhhh
Q 010911 110 VVKDFLLPAGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVG-IDSFSGTTAAASAAAIKWISKDGIGAVGRL 188 (497)
Q Consensus 110 ~l~~~FLP~GYP~SVs~dYl~Y~~w~~~q~~~s~~~~vLstqalL~~vG-VG~~~~~~A~~~AAal~WVLKDg~G~lg~i 188 (497)
+...+|||-+ ++.+|.+|..|-+..+..+.+-..+++|..+..|| .|.+ ..++.-++-+|+.+++++++|..
T Consensus 126 ~~P~~Fl~~a----~t~N~ak~va~v~~~atrs~i~~~fA~~~N~~dV~Akges---~~~~~~laG~g~gili~~~i~~~ 198 (408)
T KOG4249|consen 126 LYPHFFLPLA----STGNLAKYVAAVALHATRSPIYQHFAKQGNFGDVGAKGES---QSTASNLAGLGFGILILGRIGAC 198 (408)
T ss_pred hcchhhhhhh----hhhhHHHHHHHHHccchHhHHHHHHHhhccHHHHhhhhhH---HHHHHHHHHhHHHHHhcCcccCC
Confidence 3456788776 99999999999999999999999999999999999 6654 34466777889999998888865
No 4
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=35.98 E-value=1.1e+02 Score=33.99 Aligned_cols=109 Identities=14% Similarity=0.166 Sum_probs=61.3
Q ss_pred hhhhhhhhccccCCccCC-CCCceehhHHHHhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHhhhcccchhhHHHhhhcc
Q 010911 183 GAVGRLFIGGRFGNLFDD-DPKQWRMYADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFAI 261 (497)
Q Consensus 183 G~lg~ilfa~~~G~~~D~-d~K~wRl~AD~lnd~a~~lElltP~~P~~Fl~la~lan~~K~vA~g~~~aS~aai~~hFA~ 261 (497)
..+-.++|+--.|.--|- |.|+.=+.+|++.-+..++=.+.-.+...-..+..+..+.-+++.....++..++..+.-.
T Consensus 54 ~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~ 133 (524)
T PF05977_consen 54 STLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVP 133 (524)
T ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344445554444554443 3667777788877554332222112221111112222233333333344555667777777
Q ss_pred cCccccccccchhhHHHHHHHHHHHHHHHh
Q 010911 262 SGNLGEVAAKEEVWEVSAQLFGLALGILIL 291 (497)
Q Consensus 262 ~~NlaDVsAK~~SQet~~~LlG~~~Gi~l~ 291 (497)
++.+..-+|..+.-..++.++|-++|-+++
T Consensus 134 ~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 134 KEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 888999999999889999999966665544
No 5
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=30.44 E-value=4.1e+02 Score=31.56 Aligned_cols=104 Identities=16% Similarity=0.118 Sum_probs=47.0
Q ss_pred hhhhhccccCCccCCCCCceehh-HHHHhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHhhhcccchhhHHHhhhcccCc
Q 010911 186 GRLFIGGRFGNLFDDDPKQWRMY-ADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFAISGN 264 (497)
Q Consensus 186 g~ilfa~~~G~~~D~d~K~wRl~-AD~lnd~a~~lElltP~~P~~Fl~la~lan~~K~vA~g~~~aS~aai~~hFA~~~N 264 (497)
+.++++--.|.--|--.+|+-+. +.++.-++.++=++....+.+.. ..+.-+.-+++.|...++..++.......++
T Consensus 59 ~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 136 (1146)
T PRK08633 59 PFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWL--AFAVTFLLGAQSAIYSPAKYGIIPELVGKEN 136 (1146)
T ss_pred HHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHH--HHHHHHHHHHHHHhhchHHHhhhHHhcCccc
Confidence 33444333455455555555444 34443444443333322333211 1222222334333333333334444445566
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHh
Q 010911 265 LGEVAAKEEVWEVSAQLFGLALGILIL 291 (497)
Q Consensus 265 laDVsAK~~SQet~~~LlG~~~Gi~l~ 291 (497)
.+...+--..-..+..++|.++|.++.
T Consensus 137 r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 137 LSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 666666655555566666666665554
No 6
>COG3736 VirB8 Type IV secretory pathway, component VirB8 [Intracellular trafficking and secretion]
Probab=21.09 E-value=2.8e+02 Score=28.24 Aligned_cols=51 Identities=18% Similarity=0.305 Sum_probs=35.6
Q ss_pred HHHHHHhcCCCCEEEEEeccCCceEEEEEecCC-CCh-HHHHHHHHHHHHHhh
Q 010911 390 VKKLIRIYAKEKYILMVNQSAGDFEVFVSFKVG-ATS-LSVLRSVWQVYWLHE 440 (497)
Q Consensus 390 l~~Ll~~f~~E~YlL~~~~~~~~~~v~VvLk~~-At~-~D~LkA~~hA~~L~~ 440 (497)
+--++.+-+.|+|++.++..++...|.--++++ .++ +.+.|.+...+...+
T Consensus 61 Ia~llPLK~~epy~v~vd~~tg~~~iv~~~~s~~it~deAv~~~~i~~YV~~R 113 (239)
T COG3736 61 IAILLPLKKTEPYVVRVDNNTGNVAIVQRLDSSPITYDEAVVRYFISKYVRAR 113 (239)
T ss_pred HHhhccccccccEEEEEcCCCceEEEEEeccccccchHHHHHHHHHHHHHHHh
Confidence 445667778999999999988766655555555 333 567777777776654
No 7
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=20.52 E-value=8.7e+02 Score=29.13 Aligned_cols=109 Identities=16% Similarity=0.009 Sum_probs=57.6
Q ss_pred hhhhhhhhhccccCCccCCCCCceeh-hHHHHhhHHHHHHHhhhcCCcchHHHHHHHHHHHHHhhhcccchhhHHHhhhc
Q 010911 182 IGAVGRLFIGGRFGNLFDDDPKQWRM-YADFIGSAGSIFDLATQVYPAYFLPLASLGNLSKAVARGLKDPSFRVIQNHFA 260 (497)
Q Consensus 182 ~G~lg~ilfa~~~G~~~D~d~K~wRl-~AD~lnd~a~~lElltP~~P~~Fl~la~lan~~K~vA~g~~~aS~aai~~hFA 260 (497)
+..++.++++--.|.--|--.|++=+ ..+++.-+.+++=++....+.+...+ +..+.-+++.+...++..++.....
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~--~~~~l~gi~~a~~~p~~~a~l~~~~ 137 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLF--AALFLMGIHSALFGPIKYSILPDHL 137 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH--HHHHHHHHHHHhhchHHHHhhHhhc
Confidence 44566666666667777777777633 22332222222222222224332222 2223333433333333333433333
Q ss_pred ccCccccccccchhhHHHHHHHHHHHHHHHhc
Q 010911 261 ISGNLGEVAAKEEVWEVSAQLFGLALGILILD 292 (497)
Q Consensus 261 ~~~NlaDVsAK~~SQet~~~LlG~~~Gi~l~~ 292 (497)
..++++..++--++-..+..++|.++|-++..
T Consensus 138 ~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~ 169 (1140)
T PRK06814 138 NKDELLGANALVEAGTFIAILLGTIIGGLATI 169 (1140)
T ss_pred CccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45788888888777778888888888877764
No 8
>PRK02047 hypothetical protein; Provisional
Probab=18.03 E-value=4.4e+02 Score=22.62 Aligned_cols=49 Identities=18% Similarity=0.157 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCC--CEEEEEeccCCceEEEEEecCCCChHHHHHHHHHHHH
Q 010911 389 KVKKLIRIYAKE--KYILMVNQSAGDFEVFVSFKVGATSLSVLRSVWQVYW 437 (497)
Q Consensus 389 ~l~~Ll~~f~~E--~YlL~~~~~~~~~~v~VvLk~~At~~D~LkA~~hA~~ 437 (497)
.+.++++.+..+ .+-+...++++..-+-+.+.--+++++++.+.++++-
T Consensus 32 ~v~~iv~~~~~~~~~~~i~~k~Ss~GkY~Svtv~v~v~s~eq~~~iY~~L~ 82 (91)
T PRK02047 32 TIFKVVSVHDPEFDLEKIEERPSSGGNYTGLTITVRATSREQLDNIYRALT 82 (91)
T ss_pred HHHHHHHHhCCCCccCceEEccCCCCeEEEEEEEEEECCHHHHHHHHHHHh
Confidence 345566655443 5556666554322233444456899999999887753
No 9
>PF06757 Ins_allergen_rp: Insect allergen related repeat, nitrile-specifier detoxification; InterPro: IPR010629 This entry represents several insect specific allergen repeats. These repeats are commonly found in various proteins from cockroaches, fruit flies and mosquitos. It has been suggested that the repeat sequences have evolved by duplication of an ancestral amino acid domain, which may have arisen from the mitochondrial energy transfer proteins []. This family exemplifies a case of novel gene evolution. The case in point is the arms-race between plants and their infective insective herbivores in the area of the glucosinolate-myrosinase system. Brassicas have developed the glucosinolate-myrosinase system as chemical defence mechanism against the insects, and consequently the insects have adapted to produce a detoxifying molecule, nitrile-specifier protein (NSP). NSP is present in the Pieris rapae (Cabbage white butterfly). NSP is structurally different from and has no amino acid homology to any known detoxifying enzymes, and it appears to have arisen by a process of domain and gene duplication of a sequence of unknown function that is widespread in insect species and referred to as insect-allergen-repeat protein. Thus this family is found either as a single domain or as a multiple repeat-domain [].
Probab=16.01 E-value=1.1e+02 Score=29.20 Aligned_cols=22 Identities=18% Similarity=0.433 Sum_probs=19.0
Q ss_pred HHHhHHHHHHHHHhCCcccCcc
Q 010911 459 MEDRFDDFIQQLKGAGWNTHQL 480 (497)
Q Consensus 459 ~~~~f~~Fl~~L~~~GW~td~~ 480 (497)
....|..+.++|++.||+++..
T Consensus 154 ~~~~~~~~~~~L~~~Gvdv~~l 175 (179)
T PF06757_consen 154 ASPEFQRLLNELRENGVDVDYL 175 (179)
T ss_pred cCHHHHHHHHHHHHcCCCHHHH
Confidence 3578999999999999998864
No 10
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=15.64 E-value=2.1e+02 Score=32.17 Aligned_cols=71 Identities=20% Similarity=0.295 Sum_probs=49.1
Q ss_pred EecCCCChHHHHHHHHHHHHHhhhc--cC------ccchHHHHHHHHHHHH-----HhHHHHHHH-HHhCCcccCccccc
Q 010911 418 SFKVGATSLSVLRSVWQVYWLHENR--ES------FDNLSDWLSHSLLVME-----DRFDDFIQQ-LKGAGWNTHQLNLK 483 (497)
Q Consensus 418 vLk~~At~~D~LkA~~hA~~L~~~~--~~------~~~~~~~l~eS~~~~~-----~~f~~Fl~~-L~~~GW~td~~~L~ 483 (497)
-|..+||.+.+.+||-.-+.+-+-- .+ ....+..++++++.+. ..|+.|=.+ |+-.||.+..- .+
T Consensus 16 NlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~gwEl~~r-~~ 94 (546)
T KOG0718|consen 16 NLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKTEGWELGFR-GK 94 (546)
T ss_pred CCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccccCceeecC-CC
Confidence 4567999999999998777664421 11 1245778888888774 578888655 77799998744 45
Q ss_pred CCCccc
Q 010911 484 VPKEIS 489 (497)
Q Consensus 484 ~~~~~~ 489 (497)
.|.+|+
T Consensus 95 tpeEIr 100 (546)
T KOG0718|consen 95 TPEEIR 100 (546)
T ss_pred CHHHHH
Confidence 566654
Done!