Query 010913
Match_columns 497
No_of_seqs 486 out of 3036
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 16:54:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hc4_A Protein arginine N-meth 100.0 1.3E-36 4.6E-41 312.2 9.9 210 256-484 42-258 (376)
2 1wir_A Protein arginine N-meth 100.0 2.5E-31 8.6E-36 226.5 4.5 93 44-156 13-106 (121)
3 3q7e_A Protein arginine N-meth 100.0 2.2E-28 7.6E-33 250.2 12.6 204 258-483 27-233 (349)
4 2fyt_A Protein arginine N-meth 99.9 1.3E-27 4.6E-32 243.6 15.7 207 256-484 23-232 (340)
5 1g6q_1 HnRNP arginine N-methyl 99.9 1.5E-27 5.2E-32 242.0 10.9 202 260-483 1-205 (328)
6 3r0q_C Probable protein argini 99.9 1E-26 3.5E-31 240.3 14.9 208 258-484 24-251 (376)
7 2y1w_A Histone-arginine methyl 99.9 1.4E-23 4.8E-28 214.6 15.8 194 259-472 12-213 (348)
8 4gqb_A Protein arginine N-meth 99.9 1.1E-21 3.7E-26 212.4 11.0 184 270-483 322-521 (637)
9 3b3j_A Histone-arginine methyl 99.8 4.9E-21 1.7E-25 203.4 14.8 199 259-477 120-326 (480)
10 3ua3_A Protein arginine N-meth 99.8 1.4E-21 4.8E-26 210.6 6.7 192 270-484 377-617 (745)
11 3kkz_A Uncharacterized protein 99.6 1.5E-15 5.1E-20 148.5 15.1 155 286-463 34-191 (267)
12 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.1E-15 3.7E-20 149.8 13.5 107 295-421 68-177 (261)
13 3g5l_A Putative S-adenosylmeth 99.6 1.1E-15 3.9E-20 147.9 13.1 114 285-422 32-145 (253)
14 3f4k_A Putative methyltransfer 99.6 1.6E-15 5.6E-20 146.9 14.0 152 287-461 35-189 (257)
15 1nkv_A Hypothetical protein YJ 99.6 1.7E-15 5.9E-20 146.6 13.1 117 284-422 23-140 (256)
16 3thr_A Glycine N-methyltransfe 99.6 7.9E-16 2.7E-20 152.3 10.9 153 260-424 20-177 (293)
17 1vl5_A Unknown conserved prote 99.6 1.2E-15 4.1E-20 148.4 11.7 106 294-421 34-139 (260)
18 3mti_A RRNA methylase; SAM-dep 99.6 1.8E-15 6E-20 139.5 11.9 108 295-421 20-134 (185)
19 3jwg_A HEN1, methyltransferase 99.6 8.5E-16 2.9E-20 145.5 9.9 173 296-484 28-208 (219)
20 3bus_A REBM, methyltransferase 99.6 3.4E-15 1.2E-19 146.0 14.3 119 284-422 48-166 (273)
21 3jwh_A HEN1; methyltransferase 99.6 7.4E-16 2.5E-20 145.8 9.1 112 296-421 28-140 (217)
22 3p9n_A Possible methyltransfer 99.6 1.6E-15 5.4E-20 140.6 11.1 108 296-422 43-153 (189)
23 1pjz_A Thiopurine S-methyltran 99.6 6.6E-16 2.3E-20 145.3 7.9 118 294-419 19-137 (203)
24 3dlc_A Putative S-adenosyl-L-m 99.6 3.3E-15 1.1E-19 140.4 11.2 116 285-421 32-147 (219)
25 2gb4_A Thiopurine S-methyltran 99.6 2.8E-15 9.4E-20 146.2 10.8 112 296-420 67-189 (252)
26 2o57_A Putative sarcosine dime 99.6 4.2E-15 1.4E-19 147.5 12.2 108 294-422 79-187 (297)
27 3vc1_A Geranyl diphosphate 2-C 99.6 7.9E-15 2.7E-19 146.9 14.4 114 287-422 106-221 (312)
28 1wzn_A SAM-dependent methyltra 99.6 1.4E-14 4.9E-19 139.9 15.7 117 287-424 31-147 (252)
29 4htf_A S-adenosylmethionine-de 99.6 6E-15 2E-19 145.6 13.1 107 297-423 68-174 (285)
30 3ofk_A Nodulation protein S; N 99.6 3.5E-15 1.2E-19 140.8 10.9 117 284-422 38-154 (216)
31 3hem_A Cyclopropane-fatty-acyl 99.6 1.5E-14 5E-19 144.2 15.9 119 284-423 59-184 (302)
32 1xxl_A YCGJ protein; structura 99.6 4.2E-15 1.4E-19 143.1 11.3 111 289-421 13-123 (239)
33 3orh_A Guanidinoacetate N-meth 99.6 3.4E-15 1.1E-19 143.9 10.5 109 296-421 59-169 (236)
34 3dh0_A SAM dependent methyltra 99.6 3.8E-15 1.3E-19 140.8 10.4 112 289-421 29-142 (219)
35 3mgg_A Methyltransferase; NYSG 99.6 1.1E-14 3.7E-19 142.8 13.3 118 284-422 24-142 (276)
36 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.6E-14 5.6E-19 139.4 13.9 116 284-422 80-197 (254)
37 4hg2_A Methyltransferase type 99.6 2.8E-15 9.7E-20 146.5 8.5 105 285-420 29-133 (257)
38 2xvm_A Tellurite resistance pr 99.6 1.5E-14 5.1E-19 134.1 12.8 107 293-420 28-134 (199)
39 1y8c_A S-adenosylmethionine-de 99.6 1E-14 3.4E-19 139.8 11.8 106 296-422 36-142 (246)
40 2a14_A Indolethylamine N-methy 99.6 1.9E-15 6.4E-20 147.9 6.8 163 294-467 52-237 (263)
41 1kpg_A CFA synthase;, cyclopro 99.6 3E-14 1E-18 140.6 15.2 117 284-424 51-170 (287)
42 1ri5_A MRNA capping enzyme; me 99.6 1.4E-14 4.8E-19 143.1 12.8 113 295-424 62-176 (298)
43 1zx0_A Guanidinoacetate N-meth 99.6 8.6E-15 2.9E-19 140.6 10.9 110 296-422 59-170 (236)
44 1ve3_A Hypothetical protein PH 99.6 2.7E-14 9.4E-19 135.3 14.2 120 281-423 24-143 (227)
45 3h2b_A SAM-dependent methyltra 99.6 1.8E-14 6.3E-19 134.5 12.8 139 298-469 42-183 (203)
46 3ujc_A Phosphoethanolamine N-m 99.6 1.2E-14 4.1E-19 141.0 11.9 113 286-422 44-159 (266)
47 2ift_A Putative methylase HI07 99.6 7.2E-15 2.5E-19 138.0 9.7 111 297-425 53-166 (201)
48 2pxx_A Uncharacterized protein 99.6 6E-15 2E-19 138.4 9.1 118 284-423 31-160 (215)
49 3njr_A Precorrin-6Y methylase; 99.6 3E-14 1E-18 134.2 13.8 113 285-423 43-155 (204)
50 2fhp_A Methylase, putative; al 99.6 8E-15 2.7E-19 134.7 9.7 112 295-423 42-155 (187)
51 2vdw_A Vaccinia virus capping 99.6 9.6E-15 3.3E-19 146.1 11.0 119 296-424 47-171 (302)
52 3e05_A Precorrin-6Y C5,15-meth 99.5 3.7E-14 1.3E-18 132.9 13.8 115 284-422 27-142 (204)
53 2yqz_A Hypothetical protein TT 99.5 3.8E-14 1.3E-18 137.4 14.1 114 285-421 26-140 (263)
54 2fpo_A Methylase YHHF; structu 99.5 1.2E-14 4.2E-19 136.5 10.3 106 297-423 54-161 (202)
55 2fk8_A Methoxy mycolic acid sy 99.5 5.7E-14 2E-18 140.8 15.2 116 284-423 77-195 (318)
56 2esr_A Methyltransferase; stru 99.5 9.2E-15 3.1E-19 133.6 8.6 108 295-422 29-138 (177)
57 2ex4_A Adrenal gland protein A 99.5 1.6E-14 5.4E-19 139.0 10.5 106 296-422 78-185 (241)
58 3sm3_A SAM-dependent methyltra 99.5 3.9E-14 1.3E-18 134.7 13.1 113 296-422 29-141 (235)
59 3bkw_A MLL3908 protein, S-aden 99.5 1.8E-14 6E-19 138.1 10.7 112 288-423 34-145 (243)
60 1dus_A MJ0882; hypothetical pr 99.5 5.1E-14 1.8E-18 129.5 13.4 116 285-421 40-156 (194)
61 2p7i_A Hypothetical protein; p 99.5 1.4E-14 4.7E-19 138.9 9.7 101 296-423 41-142 (250)
62 3lcc_A Putative methyl chlorid 99.5 3E-14 1E-18 136.3 11.9 142 297-468 66-207 (235)
63 3eey_A Putative rRNA methylase 99.5 4.2E-14 1.4E-18 131.5 12.4 110 295-421 20-138 (197)
64 3dtn_A Putative methyltransfer 99.5 5.3E-14 1.8E-18 134.3 13.2 112 287-422 33-148 (234)
65 2kw5_A SLR1183 protein; struct 99.5 3.8E-14 1.3E-18 132.3 11.8 103 296-422 29-131 (202)
66 2p8j_A S-adenosylmethionine-de 99.5 1.8E-14 6.1E-19 135.0 9.6 108 295-423 21-129 (209)
67 3gu3_A Methyltransferase; alph 99.5 4.7E-14 1.6E-18 139.4 13.1 117 285-424 9-128 (284)
68 3lpm_A Putative methyltransfer 99.5 4.9E-14 1.7E-18 137.4 12.9 113 293-420 44-174 (259)
69 3d2l_A SAM-dependent methyltra 99.5 7.3E-14 2.5E-18 133.8 13.8 116 283-422 21-137 (243)
70 3g2m_A PCZA361.24; SAM-depende 99.5 2.6E-14 8.9E-19 142.1 10.9 122 285-424 71-192 (299)
71 3e23_A Uncharacterized protein 99.5 5.3E-14 1.8E-18 132.3 12.4 137 295-466 41-180 (211)
72 3m70_A Tellurite resistance pr 99.5 4.4E-14 1.5E-18 139.4 12.3 103 296-420 119-221 (286)
73 3hm2_A Precorrin-6Y C5,15-meth 99.5 3.8E-14 1.3E-18 129.2 10.9 115 284-422 12-127 (178)
74 3g5t_A Trans-aconitate 3-methy 99.5 6.3E-14 2.1E-18 139.4 13.3 114 285-420 25-147 (299)
75 3l8d_A Methyltransferase; stru 99.5 2E-14 6.9E-19 137.7 9.2 111 285-422 43-153 (242)
76 3ocj_A Putative exported prote 99.5 3.1E-14 1E-18 142.2 10.1 122 281-422 104-227 (305)
77 2gs9_A Hypothetical protein TT 99.5 5.7E-14 2E-18 131.9 11.3 97 297-422 36-132 (211)
78 3fpf_A Mtnas, putative unchara 99.5 9.3E-14 3.2E-18 137.5 13.2 104 292-422 117-222 (298)
79 3ou2_A SAM-dependent methyltra 99.5 5.5E-14 1.9E-18 132.2 11.0 102 295-423 44-147 (218)
80 3evz_A Methyltransferase; NYSG 99.5 1E-13 3.4E-18 132.2 12.8 108 295-420 53-177 (230)
81 2i62_A Nicotinamide N-methyltr 99.5 2.3E-14 7.9E-19 139.1 8.1 126 294-422 53-198 (265)
82 3pfg_A N-methyltransferase; N, 99.5 7.9E-14 2.7E-18 135.7 11.8 101 296-421 49-150 (263)
83 1nt2_A Fibrillarin-like PRE-rR 99.5 1.3E-13 4.5E-18 130.5 12.9 107 293-421 53-160 (210)
84 2p35_A Trans-aconitate 2-methy 99.5 8.8E-14 3E-18 134.6 11.9 108 288-422 24-132 (259)
85 3hnr_A Probable methyltransfer 99.5 3.3E-14 1.1E-18 134.3 8.5 100 296-422 44-145 (220)
86 3g07_A 7SK snRNA methylphospha 99.5 3.8E-14 1.3E-18 140.8 9.3 127 296-422 45-220 (292)
87 3dxy_A TRNA (guanine-N(7)-)-me 99.5 7.3E-14 2.5E-18 133.0 10.3 111 297-423 34-151 (218)
88 1xdz_A Methyltransferase GIDB; 99.5 9.3E-14 3.2E-18 133.8 11.1 100 296-420 69-172 (240)
89 2frn_A Hypothetical protein PH 99.5 9.4E-14 3.2E-18 137.2 11.1 103 296-423 124-226 (278)
90 3iv6_A Putative Zn-dependent a 99.5 1.6E-13 5.6E-18 134.0 12.7 113 286-421 34-147 (261)
91 3lbf_A Protein-L-isoaspartate 99.5 2.2E-13 7.7E-18 127.9 12.8 111 285-423 65-175 (210)
92 3ege_A Putative methyltransfer 99.5 3.7E-14 1.3E-18 138.3 7.4 108 284-420 21-128 (261)
93 4df3_A Fibrillarin-like rRNA/T 99.5 4E-13 1.4E-17 128.9 14.4 114 285-420 62-180 (233)
94 3uwp_A Histone-lysine N-methyl 99.5 1.1E-13 3.7E-18 142.0 11.0 116 286-421 162-287 (438)
95 4fsd_A Arsenic methyltransfera 99.5 3.3E-14 1.1E-18 146.8 7.3 113 295-422 81-203 (383)
96 3e8s_A Putative SAM dependent 99.5 4.5E-14 1.5E-18 133.4 7.4 110 289-423 44-153 (227)
97 3ccf_A Cyclopropane-fatty-acyl 99.5 7.3E-14 2.5E-18 137.4 9.2 100 294-421 54-153 (279)
98 3bxo_A N,N-dimethyltransferase 99.5 2.7E-13 9.1E-18 129.5 12.7 112 284-422 29-141 (239)
99 1ws6_A Methyltransferase; stru 99.5 6.7E-14 2.3E-18 126.5 8.0 106 297-423 41-148 (171)
100 3u81_A Catechol O-methyltransf 99.5 1.7E-13 5.8E-18 130.2 10.9 112 296-424 57-172 (221)
101 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.3E-13 7.9E-18 128.6 11.6 110 296-421 40-155 (214)
102 2yxd_A Probable cobalt-precorr 99.5 3.7E-13 1.3E-17 122.6 12.5 109 285-422 23-131 (183)
103 3g89_A Ribosomal RNA small sub 99.5 2.5E-13 8.5E-18 132.0 12.0 104 295-420 78-182 (249)
104 2fca_A TRNA (guanine-N(7)-)-me 99.5 2.3E-13 7.8E-18 129.0 11.4 110 297-422 38-153 (213)
105 1l3i_A Precorrin-6Y methyltran 99.5 3.7E-13 1.3E-17 123.5 12.5 114 284-422 20-134 (192)
106 3grz_A L11 mtase, ribosomal pr 99.5 2.4E-13 8.4E-18 127.2 11.3 99 296-420 59-157 (205)
107 3gdh_A Trimethylguanosine synt 99.5 2.7E-14 9.2E-19 137.2 4.6 105 296-422 77-181 (241)
108 3dr5_A Putative O-methyltransf 99.4 4.2E-13 1.4E-17 128.1 12.6 121 284-424 43-165 (221)
109 3dli_A Methyltransferase; PSI- 99.4 1.7E-13 5.8E-18 131.6 9.9 144 295-469 39-185 (240)
110 2avn_A Ubiquinone/menaquinone 99.4 2.8E-13 9.7E-18 131.8 11.3 111 285-424 44-154 (260)
111 3i9f_A Putative type 11 methyl 99.4 9.2E-14 3.1E-18 126.0 7.2 97 295-421 15-111 (170)
112 1fbn_A MJ fibrillarin homologu 99.4 5.9E-13 2E-17 127.3 13.2 110 290-421 67-177 (230)
113 3ntv_A MW1564 protein; rossman 99.4 2.4E-13 8.2E-18 130.4 10.4 105 296-422 70-176 (232)
114 2nxc_A L11 mtase, ribosomal pr 99.4 2.6E-13 8.8E-18 132.2 10.7 108 284-420 109-216 (254)
115 3dmg_A Probable ribosomal RNA 99.4 4.1E-13 1.4E-17 138.4 12.7 119 283-421 217-339 (381)
116 1jsx_A Glucose-inhibited divis 99.4 2.4E-13 8.2E-18 127.3 10.0 99 297-421 65-164 (207)
117 3bgv_A MRNA CAP guanine-N7 met 99.4 4.6E-13 1.6E-17 134.0 12.6 121 296-423 33-156 (313)
118 3ggd_A SAM-dependent methyltra 99.4 7.3E-14 2.5E-18 134.4 6.4 108 294-420 53-161 (245)
119 2ozv_A Hypothetical protein AT 99.4 3E-13 1E-17 132.2 10.9 117 291-420 30-168 (260)
120 3kr9_A SAM-dependent methyltra 99.4 5E-13 1.7E-17 127.5 12.0 103 296-421 14-118 (225)
121 3cgg_A SAM-dependent methyltra 99.4 5E-13 1.7E-17 122.9 11.5 103 295-421 44-146 (195)
122 2b3t_A Protein methyltransfera 99.4 8.4E-13 2.9E-17 129.9 13.7 120 282-421 95-237 (276)
123 2b78_A Hypothetical protein SM 99.4 4.3E-13 1.5E-17 138.6 12.0 115 296-423 211-332 (385)
124 3mb5_A SAM-dependent methyltra 99.4 4E-13 1.4E-17 130.1 11.1 109 287-421 83-193 (255)
125 3bkx_A SAM-dependent methyltra 99.4 3.2E-13 1.1E-17 132.1 10.5 119 285-421 31-158 (275)
126 4dcm_A Ribosomal RNA large sub 99.4 6E-13 2.1E-17 137.0 12.9 121 284-420 209-332 (375)
127 3lec_A NADB-rossmann superfami 99.4 5.4E-13 1.8E-17 127.6 11.6 104 296-421 20-124 (230)
128 3tfw_A Putative O-methyltransf 99.4 5.8E-13 2E-17 129.1 11.9 108 296-423 62-171 (248)
129 3bzb_A Uncharacterized protein 99.4 5.4E-13 1.8E-17 131.9 11.8 126 283-420 65-203 (281)
130 2igt_A SAM dependent methyltra 99.4 2.4E-13 8.1E-18 137.7 9.3 111 296-419 152-269 (332)
131 2aot_A HMT, histamine N-methyl 99.4 2.4E-13 8.3E-18 134.8 8.9 109 296-421 51-171 (292)
132 4dzr_A Protein-(glutamine-N5) 99.4 8.3E-14 2.8E-18 130.4 5.2 119 282-420 14-163 (215)
133 1u2z_A Histone-lysine N-methyl 99.4 7.5E-13 2.6E-17 138.0 12.8 121 285-421 230-358 (433)
134 3duw_A OMT, O-methyltransferas 99.4 5.8E-13 2E-17 126.3 10.6 109 296-423 57-168 (223)
135 3gnl_A Uncharacterized protein 99.4 7E-13 2.4E-17 127.8 11.3 103 296-421 20-124 (244)
136 2g72_A Phenylethanolamine N-me 99.4 3.8E-13 1.3E-17 133.0 9.6 126 296-421 70-214 (289)
137 3fzg_A 16S rRNA methylase; met 99.4 2.8E-13 9.5E-18 125.0 7.9 100 296-419 48-149 (200)
138 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.6E-12 5.5E-17 124.4 13.4 109 291-421 71-181 (233)
139 3ckk_A TRNA (guanine-N(7)-)-me 99.4 7.3E-13 2.5E-17 127.6 10.9 109 296-423 45-169 (235)
140 3tr6_A O-methyltransferase; ce 99.4 4.8E-13 1.6E-17 127.0 9.4 109 296-423 63-175 (225)
141 3cc8_A Putative methyltransfer 99.4 8.7E-13 3E-17 124.7 10.9 107 289-423 25-131 (230)
142 1yb2_A Hypothetical protein TA 99.4 6.7E-13 2.3E-17 130.6 10.2 109 288-423 101-212 (275)
143 1dl5_A Protein-L-isoaspartate 99.4 1.2E-12 4.1E-17 131.6 11.8 112 284-422 62-175 (317)
144 1vbf_A 231AA long hypothetical 99.4 1.7E-12 5.9E-17 123.6 12.0 109 284-422 57-165 (231)
145 4e2x_A TCAB9; kijanose, tetron 99.4 3.5E-13 1.2E-17 140.3 7.6 117 283-423 93-209 (416)
146 3m33_A Uncharacterized protein 99.4 3E-13 1E-17 129.0 6.4 92 296-419 47-139 (226)
147 3mq2_A 16S rRNA methyltransfer 99.4 1.6E-13 5.6E-18 129.7 4.4 107 295-420 25-138 (218)
148 1o9g_A RRNA methyltransferase; 99.4 9.9E-13 3.4E-17 127.3 9.8 118 287-420 41-212 (250)
149 3tma_A Methyltransferase; thum 99.4 2.4E-12 8.2E-17 131.3 13.0 124 283-424 189-319 (354)
150 2yxe_A Protein-L-isoaspartate 99.4 2.3E-12 7.8E-17 121.4 11.8 111 285-422 65-177 (215)
151 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.9E-12 6.4E-17 125.3 11.4 110 287-422 86-198 (258)
152 3ajd_A Putative methyltransfer 99.4 1.1E-12 3.8E-17 129.1 9.8 118 294-425 80-214 (274)
153 2gpy_A O-methyltransferase; st 99.4 1.2E-12 4.3E-17 125.1 9.7 106 296-423 53-161 (233)
154 3k6r_A Putative transferase PH 99.4 1.8E-12 6.3E-17 127.6 10.9 99 296-419 124-222 (278)
155 2pjd_A Ribosomal RNA small sub 99.4 1.3E-12 4.4E-17 132.8 10.1 116 284-420 183-301 (343)
156 1g8a_A Fibrillarin-like PRE-rR 99.4 4.6E-12 1.6E-16 120.5 13.2 109 291-421 67-177 (227)
157 1ixk_A Methyltransferase; open 99.4 1.6E-12 5.6E-17 130.6 10.7 114 294-425 115-249 (315)
158 1nv8_A HEMK protein; class I a 99.4 1.4E-12 4.8E-17 129.2 9.8 121 282-421 108-248 (284)
159 3htx_A HEN1; HEN1, small RNA m 99.4 1.8E-12 6.2E-17 142.2 11.3 114 295-424 719-836 (950)
160 3v97_A Ribosomal RNA large sub 99.4 1.8E-12 6.3E-17 143.5 11.5 113 296-423 538-658 (703)
161 2vdv_E TRNA (guanine-N(7)-)-me 99.4 2.3E-12 8E-17 124.5 10.9 107 295-420 47-171 (246)
162 3a27_A TYW2, uncharacterized p 99.4 1.9E-12 6.4E-17 127.4 10.2 100 295-420 117-217 (272)
163 1o54_A SAM-dependent O-methylt 99.3 2.2E-12 7.4E-17 126.9 10.6 111 287-423 102-214 (277)
164 3r3h_A O-methyltransferase, SA 99.3 4.4E-13 1.5E-17 129.7 5.4 109 296-423 59-171 (242)
165 2as0_A Hypothetical protein PH 99.3 2.2E-12 7.5E-17 133.7 11.0 116 296-424 216-337 (396)
166 3c3p_A Methyltransferase; NP_9 99.3 2.4E-12 8.3E-17 121.0 10.2 105 296-423 55-161 (210)
167 4azs_A Methyltransferase WBDD; 99.3 1.5E-12 5E-17 141.3 9.7 104 296-419 65-170 (569)
168 2yvl_A TRMI protein, hypotheti 99.3 4.4E-12 1.5E-16 121.9 11.7 110 288-423 82-191 (248)
169 3id6_C Fibrillarin-like rRNA/T 99.3 1.3E-11 4.5E-16 118.4 14.8 107 293-421 72-180 (232)
170 1vlm_A SAM-dependent methyltra 99.3 2.8E-12 9.4E-17 121.5 9.9 131 298-461 48-181 (219)
171 2h00_A Methyltransferase 10 do 99.3 1.5E-12 5.3E-17 126.1 8.3 123 283-420 49-190 (254)
172 3c0k_A UPF0064 protein YCCW; P 99.3 2.9E-12 9.8E-17 132.8 10.7 115 296-423 219-340 (396)
173 1i9g_A Hypothetical protein RV 99.3 3.3E-12 1.1E-16 125.4 10.6 112 287-423 89-204 (280)
174 3p2e_A 16S rRNA methylase; met 99.3 5.1E-13 1.8E-17 127.8 4.5 108 296-420 23-137 (225)
175 1sui_A Caffeoyl-COA O-methyltr 99.3 1.8E-12 6.3E-17 125.7 8.4 108 296-422 78-190 (247)
176 4dmg_A Putative uncharacterize 99.3 5.7E-12 1.9E-16 130.3 11.9 110 296-424 213-328 (393)
177 1af7_A Chemotaxis receptor met 99.3 8.8E-12 3E-16 122.7 12.5 131 283-421 94-251 (274)
178 3c3y_A Pfomt, O-methyltransfer 99.3 4E-12 1.4E-16 122.4 9.8 109 296-423 69-182 (237)
179 2avd_A Catechol-O-methyltransf 99.3 3.5E-12 1.2E-16 121.3 9.2 108 296-422 68-179 (229)
180 3cbg_A O-methyltransferase; cy 99.3 3.4E-12 1.2E-16 122.4 9.1 109 296-423 71-183 (232)
181 2hnk_A SAM-dependent O-methylt 99.3 4.5E-12 1.6E-16 121.8 9.4 108 296-422 59-181 (239)
182 1jg1_A PIMT;, protein-L-isoasp 99.3 6.4E-12 2.2E-16 120.4 10.4 109 286-422 80-189 (235)
183 2qe6_A Uncharacterized protein 99.3 8.7E-12 3E-16 122.8 11.5 110 297-423 77-197 (274)
184 3adn_A Spermidine synthase; am 99.3 2.5E-12 8.5E-17 128.0 7.6 114 296-422 82-198 (294)
185 1wxx_A TT1595, hypothetical pr 99.3 4.8E-12 1.6E-16 130.5 9.6 113 297-424 209-327 (382)
186 1i1n_A Protein-L-isoaspartate 99.3 1.4E-11 4.9E-16 116.9 12.2 107 295-423 75-183 (226)
187 1wy7_A Hypothetical protein PH 99.3 4.4E-11 1.5E-15 111.8 15.1 101 294-419 46-146 (207)
188 3gwz_A MMCR; methyltransferase 99.3 2.5E-11 8.5E-16 124.5 14.6 113 286-421 191-306 (369)
189 1inl_A Spermidine synthase; be 99.3 5.1E-12 1.7E-16 125.9 9.1 114 296-424 89-207 (296)
190 2p41_A Type II methyltransfera 99.3 8.5E-13 2.9E-17 132.0 3.4 146 252-421 23-190 (305)
191 1qzz_A RDMB, aclacinomycin-10- 99.3 1.9E-11 6.6E-16 125.1 13.5 113 287-422 172-287 (374)
192 1x19_A CRTF-related protein; m 99.3 2.2E-11 7.5E-16 124.3 13.6 111 287-420 180-293 (359)
193 3i53_A O-methyltransferase; CO 99.3 1.3E-11 4.6E-16 124.4 11.8 110 289-421 161-273 (332)
194 1mjf_A Spermidine synthase; sp 99.3 4E-12 1.4E-16 125.7 7.8 116 296-422 74-193 (281)
195 3mcz_A O-methyltransferase; ad 99.3 1.2E-11 3.9E-16 125.8 11.2 113 288-420 169-285 (352)
196 3hp7_A Hemolysin, putative; st 99.3 7.2E-12 2.5E-16 124.0 9.3 99 296-420 84-183 (291)
197 2b25_A Hypothetical protein; s 99.3 9E-12 3.1E-16 126.0 10.2 114 288-421 96-218 (336)
198 2pbf_A Protein-L-isoaspartate 99.3 1.1E-11 3.7E-16 117.8 10.0 111 294-422 77-193 (227)
199 2r3s_A Uncharacterized protein 99.3 1.4E-11 4.9E-16 124.0 11.3 111 288-420 154-269 (335)
200 1iy9_A Spermidine synthase; ro 99.3 9.2E-12 3.1E-16 122.7 9.6 113 296-423 74-190 (275)
201 1r18_A Protein-L-isoaspartate( 99.3 1E-11 3.5E-16 118.3 9.5 101 294-422 81-194 (227)
202 3dp7_A SAM-dependent methyltra 99.3 2E-11 7E-16 124.9 12.3 105 296-420 178-285 (363)
203 1xj5_A Spermidine synthase 1; 99.3 9.7E-12 3.3E-16 125.9 9.7 113 296-423 119-236 (334)
204 2yx1_A Hypothetical protein MJ 99.3 1.2E-11 4.1E-16 125.4 10.2 99 296-423 194-292 (336)
205 3m4x_A NOL1/NOP2/SUN family pr 99.3 9.3E-12 3.2E-16 130.7 9.6 115 294-425 102-237 (456)
206 3m6w_A RRNA methylase; rRNA me 99.3 8.4E-12 2.9E-16 131.3 8.9 114 294-425 98-232 (464)
207 1p91_A Ribosomal RNA large sub 99.3 9.3E-12 3.2E-16 121.4 8.6 93 296-421 84-177 (269)
208 2pt6_A Spermidine synthase; tr 99.2 7.4E-12 2.5E-16 126.1 8.1 111 296-422 115-230 (321)
209 2wa2_A Non-structural protein 99.2 1.3E-12 4.4E-17 128.8 2.3 112 287-420 72-191 (276)
210 2i7c_A Spermidine synthase; tr 99.2 1.7E-11 5.7E-16 121.3 10.3 114 296-423 77-193 (283)
211 2o07_A Spermidine synthase; st 99.2 9.5E-12 3.3E-16 124.4 8.4 112 296-422 94-209 (304)
212 3q87_B N6 adenine specific DNA 99.2 7E-12 2.4E-16 114.3 6.8 94 296-420 22-121 (170)
213 2b2c_A Spermidine synthase; be 99.2 7.2E-12 2.5E-16 125.8 7.5 111 296-422 107-222 (314)
214 2oxt_A Nucleoside-2'-O-methylt 99.2 8.9E-13 3E-17 129.3 0.7 112 287-420 64-183 (265)
215 3gjy_A Spermidine synthase; AP 99.2 1.2E-11 4E-16 123.8 8.6 108 299-422 91-200 (317)
216 1zq9_A Probable dimethyladenos 99.2 1.7E-11 5.8E-16 121.4 9.4 87 284-390 15-101 (285)
217 2qm3_A Predicted methyltransfe 99.2 3.3E-11 1.1E-15 123.9 11.6 99 296-417 171-272 (373)
218 1uir_A Polyamine aminopropyltr 99.2 1.8E-11 6E-16 123.0 9.4 113 296-423 76-196 (314)
219 3bwc_A Spermidine synthase; SA 99.2 1.8E-11 6E-16 122.4 9.3 111 296-421 94-209 (304)
220 1tw3_A COMT, carminomycin 4-O- 99.2 4.3E-11 1.5E-15 122.0 12.1 111 288-421 174-287 (360)
221 2yxl_A PH0851 protein, 450AA l 99.2 5.5E-11 1.9E-15 125.2 12.7 117 294-426 256-393 (450)
222 2frx_A Hypothetical protein YE 99.2 2.9E-11 9.9E-16 128.1 10.3 113 296-425 116-249 (479)
223 3opn_A Putative hemolysin; str 99.2 3.2E-11 1.1E-15 115.9 9.1 107 288-420 28-135 (232)
224 2ip2_A Probable phenazine-spec 99.2 3.1E-11 1E-15 121.8 9.3 111 287-421 158-271 (334)
225 3tm4_A TRNA (guanine N2-)-meth 99.2 5.7E-11 1.9E-15 122.1 11.2 115 285-418 206-326 (373)
226 1uwv_A 23S rRNA (uracil-5-)-me 99.2 9.6E-11 3.3E-15 122.8 12.9 117 282-420 271-387 (433)
227 2bm8_A Cephalosporin hydroxyla 99.2 9.9E-12 3.4E-16 119.7 4.5 101 297-423 81-188 (236)
228 1ej0_A FTSJ; methyltransferase 99.2 4.3E-11 1.5E-15 107.8 8.0 102 294-420 19-134 (180)
229 2jjq_A Uncharacterized RNA met 99.2 1.5E-10 5.2E-15 120.8 12.9 99 295-421 288-386 (425)
230 1sqg_A SUN protein, FMU protei 99.2 7.5E-11 2.6E-15 123.5 10.4 116 294-426 243-378 (429)
231 2plw_A Ribosomal RNA methyltra 99.2 1.1E-10 3.8E-15 108.4 10.3 101 295-420 20-152 (201)
232 3sso_A Methyltransferase; macr 99.1 7.6E-11 2.6E-15 120.7 9.3 95 296-421 215-323 (419)
233 1ne2_A Hypothetical protein TA 99.1 1.8E-10 6.2E-15 107.2 11.2 91 295-412 49-139 (200)
234 3dou_A Ribosomal RNA large sub 99.1 7E-11 2.4E-15 110.0 8.2 99 295-419 23-136 (191)
235 3frh_A 16S rRNA methylase; met 99.1 1.9E-10 6.5E-15 109.8 11.2 100 296-419 104-203 (253)
236 2nyu_A Putative ribosomal RNA 99.1 1.1E-10 3.9E-15 107.8 9.3 101 295-420 20-143 (196)
237 3giw_A Protein of unknown func 99.1 9.8E-11 3.4E-15 114.5 9.1 111 298-422 79-200 (277)
238 2h1r_A Dimethyladenosine trans 99.1 1.4E-10 4.9E-15 115.5 10.4 112 285-419 30-156 (299)
239 3lcv_B Sisomicin-gentamicin re 99.1 1E-10 3.5E-15 112.7 8.1 112 284-419 121-233 (281)
240 2cmg_A Spermidine synthase; tr 99.1 2.6E-11 9E-16 118.6 3.9 98 296-421 71-170 (262)
241 3ldu_A Putative methylase; str 99.1 2.5E-10 8.6E-15 117.7 11.1 119 283-419 181-341 (385)
242 3lst_A CALO1 methyltransferase 99.1 8.5E-11 2.9E-15 119.5 7.4 108 288-421 175-285 (348)
243 3k0b_A Predicted N6-adenine-sp 99.1 4.1E-10 1.4E-14 116.4 11.4 120 283-420 187-348 (393)
244 3ldg_A Putative uncharacterize 99.1 7.5E-10 2.6E-14 114.0 13.2 120 283-420 180-341 (384)
245 3bt7_A TRNA (uracil-5-)-methyl 99.1 3.1E-10 1.1E-14 116.4 10.4 116 284-424 201-328 (369)
246 1qam_A ERMC' methyltransferase 99.1 8.6E-10 2.9E-14 106.6 12.2 85 284-390 17-102 (244)
247 3axs_A Probable N(2),N(2)-dime 99.0 2.6E-10 9E-15 117.5 8.5 104 296-421 51-157 (392)
248 1fp1_D Isoliquiritigenin 2'-O- 99.0 2.8E-10 9.6E-15 116.7 8.5 104 287-421 198-305 (372)
249 2dul_A N(2),N(2)-dimethylguano 99.0 5.3E-10 1.8E-14 115.0 9.9 100 297-420 47-162 (378)
250 3reo_A (ISO)eugenol O-methyltr 99.0 6.8E-10 2.3E-14 113.8 10.5 105 286-421 191-299 (368)
251 4a6d_A Hydroxyindole O-methylt 99.0 1.2E-09 4.1E-14 111.4 12.2 112 285-420 167-281 (353)
252 2qfm_A Spermine synthase; sper 99.0 6.7E-10 2.3E-14 112.5 10.0 133 284-425 174-317 (364)
253 2b9e_A NOL1/NOP2/SUN domain fa 99.0 2.2E-09 7.5E-14 107.4 13.7 117 294-426 99-238 (309)
254 2zfu_A Nucleomethylin, cerebra 99.0 2.8E-10 9.7E-15 106.9 6.5 85 296-421 66-150 (215)
255 3gru_A Dimethyladenosine trans 99.0 1E-09 3.5E-14 109.0 10.3 86 284-390 37-122 (295)
256 3p9c_A Caffeic acid O-methyltr 99.0 8.7E-10 3E-14 112.8 9.8 103 288-421 191-297 (364)
257 2ld4_A Anamorsin; methyltransf 99.0 2E-10 6.8E-15 104.7 4.5 91 293-420 8-99 (176)
258 2f8l_A Hypothetical protein LM 99.0 5.8E-10 2E-14 113.2 8.3 107 296-422 129-256 (344)
259 1yub_A Ermam, rRNA methyltrans 99.0 3.8E-11 1.3E-15 116.0 -1.2 113 286-422 18-145 (245)
260 1fp2_A Isoflavone O-methyltran 99.0 8E-10 2.7E-14 112.4 8.0 96 295-421 186-287 (352)
261 2ih2_A Modification methylase 98.9 1.5E-09 5.2E-14 112.7 8.7 108 286-421 28-163 (421)
262 3tqs_A Ribosomal RNA small sub 98.9 3.7E-09 1.3E-13 102.9 10.0 89 284-390 16-104 (255)
263 2okc_A Type I restriction enzy 98.9 1.5E-09 5.1E-14 114.1 7.8 119 285-420 159-305 (445)
264 3fut_A Dimethyladenosine trans 98.8 3.9E-09 1.3E-13 103.5 7.9 84 284-390 34-118 (271)
265 2r6z_A UPF0341 protein in RSP 98.8 1.1E-09 3.6E-14 106.9 3.2 83 294-392 80-171 (258)
266 2xyq_A Putative 2'-O-methyl tr 98.8 6.9E-09 2.4E-13 102.6 8.8 95 292-420 58-169 (290)
267 3v97_A Ribosomal RNA large sub 98.8 1.7E-08 5.7E-13 111.8 12.2 123 283-420 176-345 (703)
268 1zg3_A Isoflavanone 4'-O-methy 98.8 4.7E-09 1.6E-13 106.9 6.8 95 296-421 192-292 (358)
269 3ll7_A Putative methyltransfer 98.8 7.3E-09 2.5E-13 107.0 6.9 78 297-391 93-172 (410)
270 1m6y_A S-adenosyl-methyltransf 98.7 1.5E-08 5.3E-13 100.8 7.8 85 291-390 20-106 (301)
271 3ftd_A Dimethyladenosine trans 98.7 2.5E-08 8.7E-13 96.6 7.8 84 284-390 18-103 (249)
272 2ar0_A M.ecoki, type I restric 98.7 3.2E-08 1.1E-12 106.4 8.4 122 286-419 158-309 (541)
273 3o4f_A Spermidine synthase; am 98.6 5.4E-08 1.9E-12 96.0 8.8 114 296-423 82-199 (294)
274 3uzu_A Ribosomal RNA small sub 98.6 6.9E-08 2.4E-12 95.1 9.6 70 285-373 30-103 (279)
275 3cvo_A Methyltransferase-like 98.6 2.4E-07 8.4E-12 86.5 12.0 103 297-422 30-154 (202)
276 2oyr_A UPF0341 protein YHIQ; a 98.6 2.4E-08 8.2E-13 97.1 5.3 96 288-392 77-174 (258)
277 1qyr_A KSGA, high level kasuga 98.6 3E-08 1E-12 96.2 4.5 83 285-390 9-98 (252)
278 3khk_A Type I restriction-modi 98.5 1.1E-07 3.6E-12 102.3 7.5 118 285-419 233-392 (544)
279 3lkd_A Type I restriction-modi 98.4 1.1E-06 3.6E-11 94.3 12.9 112 295-419 219-355 (542)
280 3evf_A RNA-directed RNA polyme 98.4 1E-07 3.5E-12 92.4 3.9 116 289-424 66-186 (277)
281 3c6k_A Spermine synthase; sper 98.4 8.4E-07 2.9E-11 90.2 9.5 132 283-420 190-329 (381)
282 4fzv_A Putative methyltransfer 98.4 8E-07 2.7E-11 90.4 8.9 122 294-426 145-288 (359)
283 3s1s_A Restriction endonucleas 98.3 1.8E-06 6.1E-11 95.1 10.4 115 295-422 319-465 (878)
284 3gcz_A Polyprotein; flavivirus 98.2 2.7E-07 9.2E-12 89.6 1.9 113 289-421 82-200 (282)
285 2qy6_A UPF0209 protein YFCK; s 98.2 1.6E-06 5.6E-11 84.2 7.3 119 296-419 59-210 (257)
286 2wk1_A NOVP; transferase, O-me 98.2 7.4E-06 2.5E-10 80.5 11.5 109 296-423 105-245 (282)
287 4auk_A Ribosomal RNA large sub 98.2 4.5E-06 1.5E-10 84.5 10.0 70 295-390 209-278 (375)
288 3p8z_A Mtase, non-structural p 98.1 3.4E-06 1.2E-10 79.5 6.7 109 288-419 69-183 (267)
289 1wg8_A Predicted S-adenosylmet 98.0 6.1E-06 2.1E-10 80.4 7.1 82 289-389 14-96 (285)
290 3b5i_A S-adenosyl-L-methionine 98.0 3.7E-05 1.3E-09 78.4 12.4 118 298-422 53-225 (374)
291 3lkz_A Non-structural protein 97.9 3.5E-05 1.2E-09 75.0 10.1 112 287-420 84-202 (321)
292 2px2_A Genome polyprotein [con 97.9 1E-05 3.5E-10 77.4 5.6 110 287-419 63-180 (269)
293 3eld_A Methyltransferase; flav 97.8 7.9E-06 2.7E-10 79.8 3.7 105 295-421 79-190 (300)
294 2efj_A 3,7-dimethylxanthine me 97.8 4.7E-05 1.6E-09 77.8 8.9 107 298-421 53-224 (384)
295 3ufb_A Type I restriction-modi 97.7 8.5E-05 2.9E-09 79.5 10.3 94 284-391 204-311 (530)
296 2k4m_A TR8_protein, UPF0146 pr 97.7 5.2E-05 1.8E-09 66.5 6.8 47 284-333 24-72 (153)
297 2zig_A TTHA0409, putative modi 97.6 8.3E-05 2.8E-09 73.5 7.4 47 296-343 234-280 (297)
298 1m6e_X S-adenosyl-L-methionnin 97.6 6.7E-05 2.3E-09 76.0 5.8 112 296-421 50-208 (359)
299 3tka_A Ribosomal RNA small sub 97.2 0.00041 1.4E-08 69.1 6.8 85 287-389 47-135 (347)
300 1g60_A Adenine-specific methyl 97.2 0.00052 1.8E-08 66.4 7.3 49 296-345 211-259 (260)
301 2oo3_A Protein involved in cat 97.2 0.00021 7.3E-09 69.6 4.4 103 297-419 91-195 (283)
302 1i4w_A Mitochondrial replicati 97.0 0.0012 3.9E-08 66.8 7.4 60 297-373 58-118 (353)
303 3r24_A NSP16, 2'-O-methyl tran 96.8 0.0021 7.3E-08 62.4 7.6 94 293-419 105-214 (344)
304 1f8f_A Benzyl alcohol dehydrog 96.7 0.0038 1.3E-07 63.3 9.1 97 291-419 184-286 (371)
305 3g7u_A Cytosine-specific methy 96.4 0.0057 2E-07 62.4 7.6 73 299-390 3-79 (376)
306 1g55_A DNA cytosine methyltran 96.2 0.0034 1.2E-07 63.2 4.8 73 298-390 2-76 (343)
307 2c7p_A Modification methylase 96.2 0.011 3.8E-07 59.0 8.4 71 296-390 9-79 (327)
308 3s2e_A Zinc-containing alcohol 96.2 0.0078 2.7E-07 60.1 7.1 100 291-420 160-261 (340)
309 2dph_A Formaldehyde dismutase; 96.2 0.0068 2.3E-07 62.0 6.8 105 293-420 181-297 (398)
310 4ej6_A Putative zinc-binding d 96.1 0.01 3.5E-07 60.2 7.7 100 292-420 177-282 (370)
311 1pl8_A Human sorbitol dehydrog 96.0 0.012 4.1E-07 59.2 7.8 98 294-420 168-271 (356)
312 1rjd_A PPM1P, carboxy methyl t 96.0 0.041 1.4E-06 55.1 11.2 136 280-419 80-229 (334)
313 3uko_A Alcohol dehydrogenase c 95.9 0.013 4.5E-07 59.4 7.6 99 289-419 185-292 (378)
314 2py6_A Methyltransferase FKBM; 95.8 0.024 8.1E-07 58.4 9.0 65 295-371 224-293 (409)
315 3m6i_A L-arabinitol 4-dehydrog 95.8 0.021 7.1E-07 57.5 8.3 100 292-420 174-281 (363)
316 3fpc_A NADP-dependent alcohol 95.8 0.015 5E-07 58.4 7.0 98 291-419 160-263 (352)
317 3uk3_C Zinc finger protein 217 95.7 0.0097 3.3E-07 42.3 4.2 52 45-123 3-54 (57)
318 1p0f_A NADP-dependent alcohol 95.6 0.028 9.5E-07 56.8 8.7 97 291-419 185-290 (373)
319 2fzw_A Alcohol dehydrogenase c 95.6 0.033 1.1E-06 56.2 9.2 99 290-420 183-290 (373)
320 1kol_A Formaldehyde dehydrogen 95.6 0.018 6.1E-07 58.8 7.0 103 293-419 181-297 (398)
321 3ip1_A Alcohol dehydrogenase, 95.5 0.056 1.9E-06 55.3 10.6 46 294-339 210-257 (404)
322 4dvj_A Putative zinc-dependent 95.5 0.051 1.7E-06 54.8 9.9 101 290-420 159-268 (363)
323 3two_A Mannitol dehydrogenase; 95.4 0.012 4.2E-07 58.9 5.2 89 294-420 173-263 (348)
324 3tos_A CALS11; methyltransfera 95.4 0.12 4.1E-06 49.6 11.8 110 297-423 69-218 (257)
325 3uog_A Alcohol dehydrogenase; 95.4 0.027 9.3E-07 56.7 7.7 98 291-419 183-284 (363)
326 1uuf_A YAHK, zinc-type alcohol 95.4 0.017 5.8E-07 58.5 6.1 95 293-420 190-286 (369)
327 1cdo_A Alcohol dehydrogenase; 95.4 0.032 1.1E-06 56.4 8.1 98 291-420 186-292 (374)
328 1vj0_A Alcohol dehydrogenase, 95.4 0.035 1.2E-06 56.3 8.3 99 292-419 189-295 (380)
329 1e3i_A Alcohol dehydrogenase, 95.3 0.034 1.1E-06 56.3 7.9 99 290-420 188-295 (376)
330 2jhf_A Alcohol dehydrogenase E 95.3 0.039 1.3E-06 55.7 8.4 98 291-420 185-291 (374)
331 1bbo_A Human enhancer-binding 95.3 0.022 7.5E-07 40.3 4.8 52 46-124 1-52 (57)
332 2drp_A Protein (tramtrack DNA- 95.2 0.014 4.6E-07 42.9 3.3 55 45-124 9-63 (66)
333 3fbg_A Putative arginate lyase 95.1 0.059 2E-06 53.8 9.0 100 289-419 136-245 (346)
334 2ct1_A Transcriptional repress 95.1 0.018 6.2E-07 43.8 4.1 55 45-124 14-68 (77)
335 3gms_A Putative NADPH:quinone 95.1 0.07 2.4E-06 53.1 9.5 49 289-338 136-187 (340)
336 2qrv_A DNA (cytosine-5)-methyl 95.0 0.044 1.5E-06 53.8 7.6 75 296-390 14-91 (295)
337 2d8a_A PH0655, probable L-thre 95.0 0.046 1.6E-06 54.6 7.6 98 291-420 162-265 (348)
338 1x6e_A Zinc finger protein 24; 94.9 0.024 8.3E-07 42.5 4.2 53 45-124 13-65 (72)
339 3ubt_Y Modification methylase 94.9 0.045 1.5E-06 54.3 7.4 68 300-390 2-69 (331)
340 2dmd_A Zinc finger protein 64, 94.9 0.024 8.2E-07 44.8 4.4 78 45-123 7-86 (96)
341 1pqw_A Polyketide synthase; ro 94.9 0.085 2.9E-06 47.9 8.7 97 291-419 32-134 (198)
342 1boo_A Protein (N-4 cytosine-s 94.9 0.0083 2.8E-07 59.8 1.8 49 296-345 251-299 (323)
343 2uyo_A Hypothetical protein ML 94.8 0.18 6.3E-06 49.7 11.4 130 279-423 85-219 (310)
344 4b7c_A Probable oxidoreductase 94.8 0.052 1.8E-06 53.8 7.5 102 289-420 141-246 (336)
345 1piw_A Hypothetical zinc-type 94.8 0.024 8.3E-07 57.0 5.1 97 293-420 175-274 (360)
346 1e3j_A NADP(H)-dependent ketos 94.8 0.065 2.2E-06 53.6 8.2 96 294-420 165-269 (352)
347 2lce_A B-cell lymphoma 6 prote 94.7 0.047 1.6E-06 41.0 5.5 53 44-123 15-67 (74)
348 2yt9_A Zinc finger-containing 94.7 0.023 7.8E-07 44.9 3.8 79 45-124 6-88 (95)
349 3goh_A Alcohol dehydrogenase, 94.7 0.061 2.1E-06 52.9 7.7 90 291-420 136-227 (315)
350 2adr_A ADR1; transcription reg 94.7 0.035 1.2E-06 39.8 4.4 51 46-123 2-52 (60)
351 2kmk_A Zinc finger protein GFI 94.7 0.015 5E-07 44.5 2.5 76 47-123 2-79 (82)
352 3jv7_A ADH-A; dehydrogenase, n 94.7 0.039 1.3E-06 55.0 6.3 98 294-420 168-268 (345)
353 1x5w_A Zinc finger protein 64, 94.7 0.031 1.1E-06 41.5 4.2 54 44-124 7-60 (70)
354 2ee8_A Protein ODD-skipped-rel 94.5 0.051 1.7E-06 43.8 5.4 80 44-124 15-96 (106)
355 2vz8_A Fatty acid synthase; tr 94.4 0.0067 2.3E-07 75.8 -0.1 113 285-421 1229-1347(2512)
356 3jyn_A Quinone oxidoreductase; 94.3 0.1 3.6E-06 51.5 8.3 101 289-420 132-237 (325)
357 1v3u_A Leukotriene B4 12- hydr 94.3 0.11 3.9E-06 51.3 8.6 98 290-420 138-242 (333)
358 4h0n_A DNMT2; SAH binding, tra 94.2 0.041 1.4E-06 55.1 5.0 72 299-390 4-77 (333)
359 2d9h_A Zinc finger protein 692 94.2 0.037 1.3E-06 42.1 3.7 56 45-124 6-61 (78)
360 2eih_A Alcohol dehydrogenase; 94.0 0.1 3.5E-06 51.9 7.7 95 293-420 162-263 (343)
361 4a2c_A Galactitol-1-phosphate 94.0 0.11 3.7E-06 51.6 7.8 102 292-420 155-258 (346)
362 1rjw_A ADH-HT, alcohol dehydro 93.9 0.064 2.2E-06 53.4 5.8 93 294-420 161-259 (339)
363 2cot_A Zinc finger protein 435 93.9 0.058 2E-06 40.9 4.3 52 44-122 16-67 (77)
364 4eye_A Probable oxidoreductase 93.9 0.067 2.3E-06 53.3 5.9 100 289-420 151-255 (342)
365 1iz0_A Quinone oxidoreductase; 93.9 0.071 2.4E-06 52.0 6.0 89 295-419 123-215 (302)
366 3vyw_A MNMC2; tRNA wobble urid 93.8 0.29 1E-05 48.1 10.3 111 298-420 97-224 (308)
367 3qwb_A Probable quinone oxidor 93.8 0.12 3.9E-06 51.3 7.5 100 290-420 141-245 (334)
368 2h6e_A ADH-4, D-arabinose 1-de 93.8 0.1 3.5E-06 52.0 7.2 95 294-420 168-267 (344)
369 3qv2_A 5-cytosine DNA methyltr 93.8 0.069 2.4E-06 53.2 5.8 72 298-390 10-84 (327)
370 1a1h_A QGSR zinc finger peptid 93.7 0.04 1.4E-06 42.8 3.3 77 46-123 4-84 (90)
371 3krt_A Crotonyl COA reductase; 93.7 0.17 5.8E-06 52.6 8.9 45 293-338 224-271 (456)
372 2hcy_A Alcohol dehydrogenase 1 93.6 0.14 4.9E-06 51.0 7.8 96 293-420 165-267 (347)
373 1jvb_A NAD(H)-dependent alcoho 93.6 0.11 3.9E-06 51.7 7.0 96 293-420 166-269 (347)
374 2dmi_A Teashirt homolog 3; zin 93.5 0.072 2.5E-06 43.6 4.6 81 45-126 18-105 (115)
375 2csh_A Zinc finger protein 297 93.5 0.053 1.8E-06 44.1 3.7 78 45-124 9-88 (110)
376 1eg2_A Modification methylase 93.4 0.076 2.6E-06 52.7 5.4 48 296-344 241-291 (319)
377 2gqj_A Zinc finger protein KIA 93.4 0.074 2.5E-06 42.6 4.4 54 45-124 23-77 (98)
378 2dlq_A GLI-kruppel family memb 93.4 0.093 3.2E-06 43.2 5.2 78 45-123 6-88 (124)
379 2lv2_A Insulinoma-associated p 93.4 0.06 2E-06 42.5 3.6 52 45-123 27-78 (85)
380 1qor_A Quinone oxidoreductase; 93.4 0.16 5.5E-06 50.0 7.7 97 291-419 134-236 (327)
381 2c0c_A Zinc binding alcohol de 93.3 0.17 5.7E-06 50.9 7.9 96 293-419 159-258 (362)
382 1x6h_A Transcriptional repress 93.3 0.066 2.3E-06 41.1 3.8 57 45-124 14-70 (86)
383 2dlq_A GLI-kruppel family memb 93.3 0.079 2.7E-06 43.7 4.6 80 45-124 34-117 (124)
384 2j3h_A NADP-dependent oxidored 93.3 0.12 4.2E-06 51.2 6.7 97 291-419 149-252 (345)
385 2rpc_A Zinc finger protein ZIC 93.2 0.13 4.6E-06 44.3 6.1 79 44-122 23-113 (155)
386 3tqh_A Quinone oxidoreductase; 93.2 0.23 8E-06 48.8 8.6 93 291-419 146-242 (321)
387 2dq4_A L-threonine 3-dehydroge 93.1 0.027 9.1E-07 56.2 1.6 95 292-420 160-260 (343)
388 2b5w_A Glucose dehydrogenase; 93.0 0.12 4E-06 51.9 6.1 90 299-419 174-270 (357)
389 2ebt_A Krueppel-like factor 5; 93.0 0.1 3.6E-06 41.2 4.6 80 44-123 13-97 (100)
390 4dup_A Quinone oxidoreductase; 92.9 0.15 5.2E-06 51.0 6.8 99 291-420 161-263 (353)
391 1yb5_A Quinone oxidoreductase; 92.8 0.17 5.7E-06 50.7 7.0 97 291-420 164-267 (351)
392 2wbs_A Krueppel-like factor 4; 92.6 0.074 2.5E-06 41.1 3.1 78 45-122 4-86 (89)
393 3nx4_A Putative oxidoreductase 92.5 0.25 8.7E-06 48.5 7.7 88 300-420 149-239 (324)
394 1wly_A CAAR, 2-haloacrylate re 92.5 0.31 1.1E-05 48.1 8.4 96 291-419 139-241 (333)
395 2zig_A TTHA0409, putative modi 92.5 0.1 3.4E-06 51.1 4.6 62 360-423 20-98 (297)
396 2vn8_A Reticulon-4-interacting 92.4 0.25 8.5E-06 49.8 7.6 95 295-420 181-278 (375)
397 4eez_A Alcohol dehydrogenase 1 92.3 0.38 1.3E-05 47.6 8.8 99 294-420 160-261 (348)
398 1llm_C Chimera of ZIF23-GCN4; 92.2 0.092 3.1E-06 40.8 3.3 51 46-123 3-53 (88)
399 3fwz_A Inner membrane protein 92.2 0.48 1.6E-05 40.4 8.2 94 298-419 7-102 (140)
400 2j8z_A Quinone oxidoreductase; 92.1 0.36 1.2E-05 48.2 8.3 97 291-419 156-258 (354)
401 4gzn_C ZFP-57, zinc finger pro 92.0 0.079 2.7E-06 38.8 2.4 51 45-122 3-53 (60)
402 1f2i_G Fusion of N-terminal 17 91.9 0.11 3.7E-06 38.7 3.3 52 44-122 17-70 (73)
403 2zb4_A Prostaglandin reductase 91.8 0.25 8.5E-06 49.3 6.8 97 291-419 152-257 (357)
404 3pvc_A TRNA 5-methylaminomethy 91.8 0.26 9E-06 53.9 7.5 123 297-421 58-210 (689)
405 3pxx_A Carveol dehydrogenase; 91.7 0.94 3.2E-05 43.2 10.6 108 296-420 8-151 (287)
406 2cf5_A Atccad5, CAD, cinnamyl 91.7 0.1 3.5E-06 52.3 3.8 94 294-419 176-272 (357)
407 2ej4_A Zinc finger protein ZIC 91.7 0.35 1.2E-05 37.8 6.3 62 45-124 24-85 (95)
408 3ps9_A TRNA 5-methylaminomethy 91.7 0.31 1.1E-05 53.2 7.8 122 297-421 66-218 (676)
409 1wjp_A Zinc finger protein 295 91.6 0.18 6E-06 40.7 4.5 76 45-123 15-91 (107)
410 2elu_A Zinc finger protein 406 91.6 0.074 2.5E-06 33.3 1.6 27 46-72 9-35 (37)
411 2lt7_A Transcriptional regulat 91.3 0.077 2.6E-06 45.5 2.1 79 45-124 21-101 (133)
412 3me5_A Cytosine-specific methy 91.3 0.22 7.7E-06 52.1 5.9 60 298-373 88-147 (482)
413 2dlk_A Novel protein; ZF-C2H2 91.1 0.21 7.1E-06 37.6 4.1 54 45-124 6-63 (79)
414 2cdc_A Glucose dehydrogenase g 91.1 0.29 1E-05 49.0 6.4 90 298-420 181-276 (366)
415 1yqd_A Sinapyl alcohol dehydro 91.0 0.14 4.7E-06 51.6 3.9 43 294-337 183-228 (366)
416 1a1h_A QGSR zinc finger peptid 90.9 0.17 5.7E-06 39.1 3.5 22 103-124 36-57 (90)
417 3oig_A Enoyl-[acyl-carrier-pro 90.6 0.87 3E-05 43.0 9.0 109 296-419 5-144 (266)
418 1tt7_A YHFP; alcohol dehydroge 90.6 0.36 1.2E-05 47.5 6.5 96 294-420 146-245 (330)
419 4a0s_A Octenoyl-COA reductase/ 90.5 0.47 1.6E-05 49.0 7.5 45 293-338 216-263 (447)
420 3gaz_A Alcohol dehydrogenase s 90.4 0.32 1.1E-05 48.3 5.9 96 291-420 144-244 (343)
421 2jp9_A Wilms tumor 1; DNA bind 90.0 0.33 1.1E-05 39.5 4.8 80 45-124 5-89 (119)
422 1boo_A Protein (N-4 cytosine-s 89.9 0.25 8.5E-06 49.0 4.5 61 360-422 13-84 (323)
423 4dcm_A Ribosomal RNA large sub 89.7 2.6 9E-05 42.4 12.1 96 297-419 38-133 (375)
424 4fn4_A Short chain dehydrogena 89.6 1.1 3.7E-05 42.8 8.7 79 296-390 5-92 (254)
425 1gu7_A Enoyl-[acyl-carrier-pro 89.6 0.66 2.2E-05 46.3 7.5 39 291-330 160-202 (364)
426 2ctd_A Zinc finger protein 512 89.4 0.41 1.4E-05 38.2 4.7 51 45-123 33-85 (96)
427 1xa0_A Putative NADPH dependen 89.1 0.29 1E-05 48.1 4.4 95 293-420 144-244 (328)
428 3c85_A Putative glutathione-re 88.8 1.2 4.1E-05 39.6 8.0 95 297-419 38-136 (183)
429 1wma_A Carbonyl reductase [NAD 88.7 0.82 2.8E-05 43.0 7.1 78 297-390 3-90 (276)
430 1llm_C Chimera of ZIF23-GCN4; 88.6 0.059 2E-06 42.0 -0.9 54 45-126 30-83 (88)
431 3llv_A Exopolyphosphatase-rela 88.6 1.6 5.4E-05 36.9 8.2 70 298-389 6-77 (141)
432 2vhw_A Alanine dehydrogenase; 88.5 0.41 1.4E-05 48.4 5.1 42 296-338 166-209 (377)
433 2wbt_A B-129; zinc finger; 2.7 88.5 0.38 1.3E-05 40.0 4.1 51 45-124 73-123 (129)
434 3swr_A DNA (cytosine-5)-methyl 88.5 0.86 2.9E-05 51.9 8.1 75 297-390 539-626 (1002)
435 1lss_A TRK system potassium up 88.2 2.7 9.4E-05 34.8 9.5 94 298-418 4-99 (140)
436 1pjc_A Protein (L-alanine dehy 88.2 0.47 1.6E-05 47.7 5.2 42 297-339 166-209 (361)
437 1ubd_C Protein (YY1 zinc finge 87.9 0.4 1.4E-05 39.4 3.8 77 45-123 4-86 (124)
438 3ggo_A Prephenate dehydrogenas 87.8 1.8 6E-05 42.6 9.0 89 298-419 33-125 (314)
439 2eps_A POZ-, at HOOK-, and zin 87.7 0.44 1.5E-05 33.2 3.4 28 44-71 10-37 (54)
440 2ghf_A ZHX1, zinc fingers and 87.4 0.33 1.1E-05 39.5 2.9 55 44-121 16-70 (102)
441 2j7j_A Transcription factor II 87.3 0.29 1E-05 37.1 2.4 24 47-70 2-27 (85)
442 3ucx_A Short chain dehydrogena 87.2 2.6 8.9E-05 39.8 9.7 80 295-390 8-96 (264)
443 2eez_A Alanine dehydrogenase; 87.0 0.82 2.8E-05 46.0 6.3 98 296-419 164-263 (369)
444 3v8b_A Putative dehydrogenase, 87.0 1.6 5.6E-05 41.8 8.2 79 296-390 26-113 (283)
445 2i13_A AART; DNA binding, zinc 87.0 0.33 1.1E-05 43.4 3.0 78 45-123 76-155 (190)
446 2i13_A AART; DNA binding, zinc 86.9 0.36 1.2E-05 43.1 3.2 79 45-124 48-128 (190)
447 2g1u_A Hypothetical protein TM 86.9 0.6 2E-05 40.5 4.5 38 295-333 16-55 (155)
448 2gli_A Protein (five-finger GL 86.8 0.83 2.9E-05 39.0 5.4 78 46-123 3-91 (155)
449 3ado_A Lambda-crystallin; L-gu 86.8 2.5 8.4E-05 41.7 9.4 118 298-431 6-132 (319)
450 4g81_D Putative hexonate dehyd 86.7 1.1 3.7E-05 42.9 6.5 79 296-390 7-94 (255)
451 1id1_A Putative potassium chan 86.5 2.4 8.2E-05 36.4 8.2 97 298-419 3-102 (153)
452 3rkr_A Short chain oxidoreduct 86.3 2.1 7.3E-05 40.3 8.5 80 295-390 26-114 (262)
453 3o38_A Short chain dehydrogena 86.3 2.9 9.8E-05 39.4 9.4 80 296-390 20-109 (266)
454 2jp9_A Wilms tumor 1; DNA bind 86.2 0.46 1.6E-05 38.6 3.2 77 45-122 35-117 (119)
455 2jsp_A Transcriptional regulat 86.1 0.32 1.1E-05 38.3 2.0 50 45-97 20-69 (87)
456 3qiv_A Short-chain dehydrogena 86.1 2.4 8.3E-05 39.5 8.7 79 296-390 7-94 (253)
457 3sju_A Keto reductase; short-c 86.1 2 7E-05 41.0 8.3 79 296-390 22-109 (279)
458 3zwc_A Peroxisomal bifunctiona 86.0 1.6 5.6E-05 48.1 8.4 120 299-432 317-439 (742)
459 3gqv_A Enoyl reductase; medium 86.0 0.93 3.2E-05 45.5 6.0 94 296-420 163-261 (371)
460 3tjr_A Short chain dehydrogena 86.0 2.3 8E-05 41.1 8.8 79 296-390 29-116 (301)
461 3h7a_A Short chain dehydrogena 85.6 1.6 5.6E-05 41.0 7.2 78 296-390 5-91 (252)
462 1zsy_A Mitochondrial 2-enoyl t 85.6 2.3 8E-05 42.2 8.8 42 289-330 159-203 (357)
463 3l9w_A Glutathione-regulated p 85.2 1.2 4.2E-05 45.6 6.5 94 298-419 4-99 (413)
464 4da9_A Short-chain dehydrogena 85.2 3.2 0.00011 39.6 9.3 79 296-390 27-115 (280)
465 2eod_A TNF receptor-associated 85.1 0.3 1E-05 35.6 1.4 54 44-128 8-62 (66)
466 3gaf_A 7-alpha-hydroxysteroid 85.0 2.5 8.6E-05 39.7 8.2 79 296-390 10-97 (256)
467 3ce6_A Adenosylhomocysteinase; 85.0 2.2 7.4E-05 44.8 8.4 42 295-337 271-314 (494)
468 4a27_A Synaptic vesicle membra 84.9 0.71 2.4E-05 45.8 4.5 98 289-419 134-235 (349)
469 2dpo_A L-gulonate 3-dehydrogen 84.5 5.6 0.00019 39.1 10.8 111 299-425 7-126 (319)
470 4hp8_A 2-deoxy-D-gluconate 3-d 84.5 3.5 0.00012 39.1 8.9 78 295-390 6-87 (247)
471 3tfo_A Putative 3-oxoacyl-(acy 84.4 2.8 9.6E-05 39.8 8.3 78 297-390 3-89 (264)
472 1yb1_A 17-beta-hydroxysteroid 84.3 4 0.00014 38.6 9.4 80 295-390 28-116 (272)
473 3lyl_A 3-oxoacyl-(acyl-carrier 84.2 2.9 9.9E-05 38.8 8.2 79 296-390 3-90 (247)
474 1zcj_A Peroxisomal bifunctiona 84.2 5.3 0.00018 41.4 11.0 106 299-425 38-153 (463)
475 3o26_A Salutaridine reductase; 84.1 2.6 9E-05 40.2 8.1 80 296-390 10-99 (311)
476 3imf_A Short chain dehydrogena 84.0 2.4 8.2E-05 39.9 7.6 79 296-390 4-91 (257)
477 2gli_A Protein (five-finger GL 83.8 1.4 4.9E-05 37.5 5.5 25 46-70 67-93 (155)
478 1znf_A 31ST zinc finger from X 83.8 0.77 2.6E-05 26.1 2.6 25 46-70 1-25 (27)
479 3p2y_A Alanine dehydrogenase/p 83.7 0.37 1.3E-05 48.8 1.8 42 296-338 182-225 (381)
480 1eg2_A Modification methylase 83.3 0.99 3.4E-05 44.6 4.6 60 360-422 37-106 (319)
481 4iin_A 3-ketoacyl-acyl carrier 82.6 4 0.00014 38.6 8.6 80 295-390 26-115 (271)
482 3t7c_A Carveol dehydrogenase; 82.5 4.1 0.00014 39.2 8.8 79 296-390 26-125 (299)
483 3pk0_A Short-chain dehydrogena 82.3 3.5 0.00012 38.8 8.1 80 296-390 8-96 (262)
484 3ioy_A Short-chain dehydrogena 82.3 3.6 0.00012 40.2 8.3 81 296-390 6-95 (319)
485 2epa_A Krueppel-like factor 10 82.2 0.95 3.2E-05 33.3 3.2 52 44-122 15-70 (72)
486 3uve_A Carveol dehydrogenase ( 82.0 4.3 0.00015 38.6 8.7 79 296-390 9-112 (286)
487 1tf6_A Protein (transcription 82.0 1.5 5.1E-05 39.0 5.0 50 43-122 131-185 (190)
488 3pgx_A Carveol dehydrogenase; 81.9 4.4 0.00015 38.5 8.7 80 295-390 12-113 (280)
489 3l77_A Short-chain alcohol deh 81.8 3.5 0.00012 37.9 7.7 77 298-390 2-88 (235)
490 2f1k_A Prephenate dehydrogenas 81.6 6.4 0.00022 37.3 9.7 85 300-419 2-88 (279)
491 1ubd_C Protein (YY1 zinc finge 81.4 0.76 2.6E-05 37.7 2.6 80 45-124 33-117 (124)
492 4fgs_A Probable dehydrogenase 81.4 4 0.00014 39.2 8.1 76 296-390 27-111 (273)
493 1klr_A Zinc finger Y-chromosom 81.2 0.93 3.2E-05 26.3 2.3 26 46-71 2-27 (30)
494 3awd_A GOX2181, putative polyo 81.2 5.3 0.00018 37.1 8.8 79 296-390 11-98 (260)
495 3lf2_A Short chain oxidoreduct 81.1 5.4 0.00018 37.5 8.9 80 296-390 6-95 (265)
496 2jah_A Clavulanic acid dehydro 81.0 5.4 0.00018 37.1 8.8 79 296-390 5-92 (247)
497 4e12_A Diketoreductase; oxidor 80.9 8 0.00027 36.9 10.2 108 299-424 5-123 (283)
498 3svt_A Short-chain type dehydr 80.9 5 0.00017 38.1 8.7 82 296-390 9-99 (281)
499 3sx2_A Putative 3-ketoacyl-(ac 80.8 4.2 0.00014 38.5 8.1 79 296-390 11-110 (278)
500 3i1j_A Oxidoreductase, short c 80.7 5.4 0.00018 36.8 8.6 81 295-390 11-102 (247)
No 1
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=312.24 Aligned_cols=210 Identities=42% Similarity=0.703 Sum_probs=183.5
Q ss_pred hhhccccccccccchhHHhhhcchhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHH
Q 010913 256 KKVNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAV 335 (497)
Q Consensus 256 ~~~~~~Yf~~y~~~~ih~~ml~d~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~ 335 (497)
+..+..||++|++++||++|++|.+|+.+|+++|.++...++|++|||||||||++++++|++|+++|+|||.|+ |+..
T Consensus 42 ~~~d~~Yf~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~ 120 (376)
T 4hc4_A 42 RERDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQ 120 (376)
T ss_dssp -------CCCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHH
T ss_pred ccchhhhhhhccCcHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHH
Confidence 345778999999999999999999999999999999988889999999999999999999999999999999997 8899
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCC
Q 010913 336 ATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG 415 (497)
Q Consensus 336 A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg 415 (497)
|+++++.||+ .++|++++++++++. + +++||+|||+||+++++++.++..++.++.|+||||
T Consensus 121 a~~~~~~n~~-------------~~~i~~i~~~~~~~~----l-pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~ 182 (376)
T 4hc4_A 121 AREVVRFNGL-------------EDRVHVLPGPVETVE----L-PEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEG 182 (376)
T ss_dssp HHHHHHHTTC-------------TTTEEEEESCTTTCC----C-SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEE
T ss_pred HHHHHHHcCC-------------CceEEEEeeeeeeec----C-CccccEEEeecccccccccchhhhHHHHHHhhCCCC
Confidence 9999999998 368999999999984 3 478999999999999999999999999999999999
Q ss_pred cEEeccCceeEEeeecCCC--CCCCccccc---cCccccccchHHHhhhc--CCCeEeeeCCCcccccchhhhHhh
Q 010913 416 GAILPDTATMFVAGFGRGG--TSLPFWENV---YGFTMSCVGREVVQDAA--GIPIVDVVDDHDLVTDSVVLQVSV 484 (497)
Q Consensus 416 G~li~~~~~~~~~~~~~~~--~~~~fw~~v---~g~~~~~~~~~~~~~~~--~~p~v~~v~~~~l~t~~~~i~~~~ 484 (497)
|+++|+.++++++++.... ..+.||.++ |||+|+++........+ ..|.++.+++..++++|..+..|.
T Consensus 183 G~~iP~~atly~apie~~~l~~~i~~w~~v~~~yGfd~s~~~~~~~~~~~~~~e~~v~~~~~~~~Ls~p~~i~~~D 258 (376)
T 4hc4_A 183 GLLLPASAELFIVPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLE 258 (376)
T ss_dssp EEEESCEEEEEEEEECCHHHHHHHHGGGGHHHHHSCCCGGGHHHHHHHHHSSCEEEEECCCGGGBCSCCEEEEEEE
T ss_pred ceECCccceEEEEEeccchhhhhhcchhccccccCcCchhhhhhhhhhhcccCceEEEeecccccccCCEEEEEEE
Confidence 9999999999999997642 345689887 99999999877655433 467889999999999998876653
No 2
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=99.96 E-value=2.5e-31 Score=226.45 Aligned_cols=93 Identities=35% Similarity=0.757 Sum_probs=79.6
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHH
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
..+++||||+++|++++.+++||+++|+|||..++++++||||++||||||||+++.. ..||..
T Consensus 13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~i~~~~~LDfY~~IKLINyIR~~~~~----------------~~~l~~ 76 (121)
T 1wir_A 13 RQHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIRLKNPT----------------VEYMNS 76 (121)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHHHTCCC----------------HHHHHS
T ss_pred CCceeEecCCCcccCHHHHHHHHHHhcCCCHHHHHHhcCCCceEEEEEEEeeecccCC----------------hhhhcc
Confidence 4689999999999999999999999999999999999999999999999999998532 235542
Q ss_pred hccCcccCCCCCCCCcccccccCcccc-ccccCC
Q 010913 124 AYNLKETKLRWDKEKYLKPFMQDDKLL-YSFGED 156 (497)
Q Consensus 124 ~~~~~~~~~~w~~d~yl~Pv~e~D~lL-~~~d~~ 156 (497)
... +..|++|+||+||||||+|| +++|+.
T Consensus 77 ---~~~-~~~Wddd~yL~PvledD~LL~~dledl 106 (121)
T 1wir_A 77 ---IYN-PVPWEKDEYLKPVLEDDLLLQFDVEDL 106 (121)
T ss_dssp ---CCS-SCTTCCHHHHSCSSSSCHHHHSCGGGG
T ss_pred ---ccC-CCCCCCCccccccCCCCceeeeecccc
Confidence 222 35899999999999999999 455543
No 3
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.95 E-value=2.2e-28 Score=250.24 Aligned_cols=204 Identities=46% Similarity=0.881 Sum_probs=175.1
Q ss_pred hccccccccccchhHHhhhcchhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHH
Q 010913 258 VNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVAT 337 (497)
Q Consensus 258 ~~~~Yf~~y~~~~ih~~ml~d~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~ 337 (497)
..+.||++|+.+++|..|++|..|+..|+++|..+..+.++++|||||||+|.+++.++++|+.+|+|||+|+ +++.|+
T Consensus 27 ~~~~yf~~y~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~ 105 (349)
T 3q7e_A 27 SKDYYFDSYAHFGIHEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV 105 (349)
T ss_dssp ----------CCHHHHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH
T ss_pred hHHHHHHhhhhhHHHHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH
Confidence 4567999999999999999999999999999998877789999999999999999999999888999999995 999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcE
Q 010913 338 QIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGA 417 (497)
Q Consensus 338 ~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~ 417 (497)
++++.+++ .+++++++++++++ +++.++||+|+++++++++.++.++..++.++.++|||||+
T Consensus 106 ~~~~~~~~-------------~~~v~~~~~d~~~~----~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~ 168 (349)
T 3q7e_A 106 KIVKANKL-------------DHVVTIIKGKVEEV----ELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGL 168 (349)
T ss_dssp HHHHHTTC-------------TTTEEEEESCTTTC----CCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEE
T ss_pred HHHHHcCC-------------CCcEEEEECcHHHc----cCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCE
Confidence 99999988 35799999999987 36778999999999999999999999999999999999999
Q ss_pred EeccCceeEEeeecCC---CCCCCccccccCccccccchHHHhhhcCCCeEeeeCCCcccccchhhhHh
Q 010913 418 ILPDTATMFVAGFGRG---GTSLPFWENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQVS 483 (497)
Q Consensus 418 li~~~~~~~~~~~~~~---~~~~~fw~~v~g~~~~~~~~~~~~~~~~~p~v~~v~~~~l~t~~~~i~~~ 483 (497)
++|+..+++..++... .....||.++|||+|+++.... +..|.++.+++..++++++.+..+
T Consensus 169 li~~~~~~~~~~~~~~~~~~~~~~~w~~~~G~d~~~~~~~~----~~~p~v~~~~~~~~~~~~~~~~~~ 233 (349)
T 3q7e_A 169 IFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVA----IKEPLVDVVDPKQLVTNACLIKEV 233 (349)
T ss_dssp EESCEEEEEEEEECCHHHHHHHTGGGGCBTTBCCGGGHHHH----HTSCEEECCCGGGEEEEEEEEEEE
T ss_pred EccccceEEEeeecChhhhhhhhcccccccCcchHHHhHhh----hcCcEEEEEChhhEecccEEEEEE
Confidence 9999999998887654 2356799999999999987664 455899999999999999877654
No 4
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.95 E-value=1.3e-27 Score=243.62 Aligned_cols=207 Identities=42% Similarity=0.818 Sum_probs=179.2
Q ss_pred hhhccccccccccchhHHhhhcchhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHH
Q 010913 256 KKVNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAV 335 (497)
Q Consensus 256 ~~~~~~Yf~~y~~~~ih~~ml~d~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~ 335 (497)
...+..||++|+.+++|..|++|..|+..|+++|.......++.+|||||||+|.+++.++++|+.+|+|+|+|+ +++.
T Consensus 23 ~~~d~~Y~~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~ 101 (340)
T 2fyt_A 23 EDEDGVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQ 101 (340)
T ss_dssp -------CCGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHH
T ss_pred ccchhhHHHhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHH
Confidence 345667999999999999999999999999999999988889999999999999999999999888999999997 9999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCC
Q 010913 336 ATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG 415 (497)
Q Consensus 336 A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg 415 (497)
|+++++.+++ .++++++.+|+.++ +++.++||+|++++|++++.++.++..++.++.++||||
T Consensus 102 a~~~~~~~~~-------------~~~i~~~~~d~~~~----~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~Lkpg 164 (340)
T 2fyt_A 102 AMDIIRLNKL-------------EDTITLIKGKIEEV----HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG 164 (340)
T ss_dssp HHHHHHHTTC-------------TTTEEEEESCTTTS----CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHcCC-------------CCcEEEEEeeHHHh----cCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCC
Confidence 9999999987 35899999999987 366789999999999999999999999999999999999
Q ss_pred cEEeccCceeEEeeecCC---CCCCCccccccCccccccchHHHhhhcCCCeEeeeCCCcccccchhhhHhh
Q 010913 416 GAILPDTATMFVAGFGRG---GTSLPFWENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQVSV 484 (497)
Q Consensus 416 G~li~~~~~~~~~~~~~~---~~~~~fw~~v~g~~~~~~~~~~~~~~~~~p~v~~v~~~~l~t~~~~i~~~~ 484 (497)
|.++|+.++++..++... .....||.+++||+++.+.+.. +..|.++.+++..++++|..+..+.
T Consensus 165 G~lip~~~~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~~~~----~~~~~v~~~~~~~~ls~p~~~~~~d 232 (340)
T 2fyt_A 165 GSVYPDICTISLVAVSDVNKHADRIAFWDDVYGFKMSCMKKAV----IPEAVVEVLDPKTLISEPCGIKHID 232 (340)
T ss_dssp EEEESCEEEEEEEEECCHHHHHHHTGGGGCBTTBCCGGGHHHH----TTBCEEECCCGGGBCBCCEEEEEEE
T ss_pred cEEEcccceEEEEEecchhHhhhhhcccccccCcChHHHHHhh----hcCcEEEEechhhcccCCEEEEEEE
Confidence 999999999988887643 2446789999999999887654 4567899999999999998887665
No 5
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.94 E-value=1.5e-27 Score=242.03 Aligned_cols=202 Identities=44% Similarity=0.798 Sum_probs=178.5
Q ss_pred cccccccccchhHHhhhcchhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Q 010913 260 ESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQI 339 (497)
Q Consensus 260 ~~Yf~~y~~~~ih~~ml~d~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~ 339 (497)
+.||++|+.+++|..|++|..|+..|+++|.......++.+|||||||+|.+++.++++|+.+|+|+|+| .+++.|+++
T Consensus 1 d~Yf~~y~~~~~~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~ 79 (328)
T 1g6q_1 1 DYYFDSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKEL 79 (328)
T ss_dssp CCCCCCCCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHH
T ss_pred CchhhhhcCchHHHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHH
Confidence 3699999999999999999999999999998877778899999999999999999999988899999999 599999999
Q ss_pred HHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 340 AKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 340 ~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
++.+++ .++|+++.+++.++. ++.++||+|+++++++++.++.++..++.++.++|||||.++
T Consensus 80 ~~~~~~-------------~~~i~~~~~d~~~~~----~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 80 VELNGF-------------SDKITLLRGKLEDVH----LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp HHHTTC-------------TTTEEEEESCTTTSC----CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred HHHcCC-------------CCCEEEEECchhhcc----CCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 999987 358999999999873 566899999999999999999999999999999999999999
Q ss_pred ccCceeEEeeecCC---CCCCCccccccCccccccchHHHhhhcCCCeEeeeCCCcccccchhhhHh
Q 010913 420 PDTATMFVAGFGRG---GTSLPFWENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQVS 483 (497)
Q Consensus 420 ~~~~~~~~~~~~~~---~~~~~fw~~v~g~~~~~~~~~~~~~~~~~p~v~~v~~~~l~t~~~~i~~~ 483 (497)
|+.++++...+... ...+.+|.+++||+++.+.+.. ...|.++.+++..++++|..+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~gf~~~~~~~~~----~~~~~v~~~~~~~~ls~~~~~~~~ 205 (328)
T 1g6q_1 143 PDKCSIHLAGLEDSQYKDEKLNYWQDVYGFDYSPFVPLV----LHEPIVDTVERNNVNTTSDKLIEF 205 (328)
T ss_dssp SCEEEEEEEEECCHHHHHHHHHHTTCBTTBCCTTHHHHH----TTSCEEECCCGGGBCBCCEEEEEE
T ss_pred EeeceEEEEEecCchhhhhhhcccccccCcChHHHhhhh----hcCCeEEEeccceeecCCEEEEEE
Confidence 99999888877643 2334689999999999887665 355799999999999999877655
No 6
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.94 E-value=1e-26 Score=240.29 Aligned_cols=208 Identities=36% Similarity=0.633 Sum_probs=182.1
Q ss_pred hccccccccccchhHHhhhcchhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHH
Q 010913 258 VNESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVAT 337 (497)
Q Consensus 258 ~~~~Yf~~y~~~~ih~~ml~d~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~ 337 (497)
..+.||++|+.+..|..|++|..|+..|.++|..+....++++|||||||+|.+++.++++|+.+|+|||+| .|++.|+
T Consensus 24 ~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~ 102 (376)
T 3r0q_C 24 DYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR 102 (376)
T ss_dssp ----CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH
T ss_pred cHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH
Confidence 457899999999999999999999999999999998889999999999999999999999998899999999 8999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcE
Q 010913 338 QIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGA 417 (497)
Q Consensus 338 ~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~ 417 (497)
++++.+++ .++++++++|++++. ++ ++||+|+++++++++.++.++..++.++.++|||||+
T Consensus 103 ~~~~~~~~-------------~~~v~~~~~d~~~~~----~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~ 164 (376)
T 3r0q_C 103 ALVKANNL-------------DHIVEVIEGSVEDIS----LP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGV 164 (376)
T ss_dssp HHHHHTTC-------------TTTEEEEESCGGGCC----CS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEE
T ss_pred HHHHHcCC-------------CCeEEEEECchhhcC----cC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeE
Confidence 99999988 357999999999874 44 8999999999999999999999999999999999999
Q ss_pred EeccCceeEEeeecCCCC---CC----------Ccc---ccccCccccccchHHHhh----hcCCCeEeeeCCCcccccc
Q 010913 418 ILPDTATMFVAGFGRGGT---SL----------PFW---ENVYGFTMSCVGREVVQD----AAGIPIVDVVDDHDLVTDS 477 (497)
Q Consensus 418 li~~~~~~~~~~~~~~~~---~~----------~fw---~~v~g~~~~~~~~~~~~~----~~~~p~v~~v~~~~l~t~~ 477 (497)
++++..+.+..+...... .. .|| .++||++++.+...+..+ ....|.++++.+..++++|
T Consensus 165 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~fw~~~~~~~G~d~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~lt~~ 244 (376)
T 3r0q_C 165 MYPSHARMWLAPIKSNIADRKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTP 244 (376)
T ss_dssp EESSEEEEEEEEECCTHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCGGGHHHHHHHHHHHHTSBCEEECCCGGGBCBCC
T ss_pred EEEecCeEEEEeecchHHhhhhhhhhhhhhhhhhhhhccCccccCChHHHHhhhhhhhhhhcccCceEEEEChHHccCCC
Confidence 999999999888765421 11 578 789999999998875433 4588999999999999999
Q ss_pred hhhhHhh
Q 010913 478 VVLQVSV 484 (497)
Q Consensus 478 ~~i~~~~ 484 (497)
+.+..+.
T Consensus 245 ~~~~~~d 251 (376)
T 3r0q_C 245 TIVKEMD 251 (376)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 8876554
No 7
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.90 E-value=1.4e-23 Score=214.55 Aligned_cols=194 Identities=38% Similarity=0.647 Sum_probs=165.2
Q ss_pred ccccccccccchhHHhhhcchhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHH
Q 010913 259 NESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQ 338 (497)
Q Consensus 259 ~~~Yf~~y~~~~ih~~ml~d~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~ 338 (497)
.+.||+.|..+.+|..|++|..|+..|.++|+......++.+|||||||+|.+++.++++|+.+|+|||+|+ +++.|++
T Consensus 12 ~~~y~~~y~~~~~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~ 90 (348)
T 2y1w_A 12 AVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEV 90 (348)
T ss_dssp HHHHHHHHTCHHHHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHH
Confidence 456999999999999999999999999999999988889999999999999999999999888999999997 8899999
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEE
Q 010913 339 IAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAI 418 (497)
Q Consensus 339 ~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~l 418 (497)
+++.+++ .++++++.++++++. + +++||+|+|+++++++..+.. ...+..+.++|||||.+
T Consensus 91 ~~~~~~l-------------~~~v~~~~~d~~~~~----~-~~~~D~Ivs~~~~~~~~~~~~-~~~l~~~~~~LkpgG~l 151 (348)
T 2y1w_A 91 LVKSNNL-------------TDRIVVIPGKVEEVS----L-PEQVDIIISEPMGYMLFNERM-LESYLHAKKYLKPSGNM 151 (348)
T ss_dssp HHHHTTC-------------TTTEEEEESCTTTCC----C-SSCEEEEEECCCBTTBTTTSH-HHHHHHGGGGEEEEEEE
T ss_pred HHHHcCC-------------CCcEEEEEcchhhCC----C-CCceeEEEEeCchhcCChHHH-HHHHHHHHhhcCCCeEE
Confidence 9999987 358999999999863 3 368999999988777665544 44666788999999999
Q ss_pred eccCceeEEeeecCCC------CCCCcc--ccccCccccccchHHHhhhcCCCeEeeeCCCc
Q 010913 419 LPDTATMFVAGFGRGG------TSLPFW--ENVYGFTMSCVGREVVQDAAGIPIVDVVDDHD 472 (497)
Q Consensus 419 i~~~~~~~~~~~~~~~------~~~~fw--~~v~g~~~~~~~~~~~~~~~~~p~v~~v~~~~ 472 (497)
++..++.+..++.... ....|| ..++|++++.+......++|..|++++++...
T Consensus 152 i~~~~~~~~~~i~~~~~~~~~~~~~~~w~~~~~~g~d~~~l~~~~~~~~f~~p~~d~~~~~~ 213 (348)
T 2y1w_A 152 FPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRI 213 (348)
T ss_dssp ESCEEEEEEEEECCHHHHHHHHHHHGGGCCSCBTTBCCGGGHHHHHHHHHTSCEEECCCGGG
T ss_pred EEecCcEEEEEecchHHhhhhccccCcccccccCcccHHHhhhHHHhhhccCCeEEeECCee
Confidence 9999998887765431 123567 46789999999999888899999999877543
No 8
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.85 E-value=1.1e-21 Score=212.35 Aligned_cols=184 Identities=21% Similarity=0.217 Sum_probs=148.9
Q ss_pred hhHHhhhcchhhhHHHHHHHHhC--------CCCCCCCEEEEEcCCCCHhHHHHHHcCCC-----EEEEEeCCHHHHHHH
Q 010913 270 GIHREMISDKVRTDSYRQAILEN--------PSLMKGAVVMDIGCGTGILSLFAAQAGAS-----RVIAVEASEKMAAVA 336 (497)
Q Consensus 270 ~ih~~ml~d~~r~~~y~~~i~~~--------~~~~~~~~VLDvGCGtG~ls~~la~~G~~-----~V~gvD~S~~~i~~A 336 (497)
..++-+-+|++|++.|.++|.+. ....++.+|||||||+|.++++++++|+. +|+|||.|+ ++..|
T Consensus 322 ~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a 400 (637)
T 4gqb_A 322 QTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVT 400 (637)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHH
T ss_pred hhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHH
Confidence 46777889999999999999752 22345679999999999997777766442 789999998 66689
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCc
Q 010913 337 TQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGG 416 (497)
Q Consensus 337 ~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG 416 (497)
++..+.|++ .++|++++|+++++. .++++|+|||+|||+++.++.++ ++|.++.|+|||||
T Consensus 401 ~~~v~~N~~-------------~dkVtVI~gd~eev~-----LPEKVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgG 461 (637)
T 4gqb_A 401 LENWQFEEW-------------GSQVTVVSSDMREWV-----APEKADIIVSELLGSFADNELSP-ECLDGAQHFLKDDG 461 (637)
T ss_dssp HHHHHHHTT-------------GGGEEEEESCTTTCC-----CSSCEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEE
T ss_pred HHHHHhccC-------------CCeEEEEeCcceecc-----CCcccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCc
Confidence 999999998 469999999999985 35799999999999999999988 69999999999999
Q ss_pred EEeccCceeEEeeecCCC---CCCCccccccCccccccchHHHhhhcCCCeEeeeCCCcccccchhhhHh
Q 010913 417 AILPDTATMFVAGFGRGG---TSLPFWENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDSVVLQVS 483 (497)
Q Consensus 417 ~li~~~~~~~~~~~~~~~---~~~~fw~~v~g~~~~~~~~~~~~~~~~~p~v~~v~~~~l~t~~~~i~~~ 483 (497)
+++|+.++++++++.... ....+|...+++.+ .+..|.+..+.+..++++|..+..|
T Consensus 462 imiPs~atlyiapi~~~~l~~e~~~~~~~~~~~~~----------~~~~p~Vv~~~~~~~Ls~p~~~~~f 521 (637)
T 4gqb_A 462 VSIPGEYTSFLAPISSSKLYNEVRACREKDRDPEA----------QFEMPYVVRLHNFHQLSAPQPCFTF 521 (637)
T ss_dssp EEESCEEEEEEEEEECHHHHHHHHTTCCTTSCTTG----------GGGSCEECBCCSCEECSCCEEEEEE
T ss_pred EEccccceEEEEEecCHHHHHHHHhcccccccchh----------hcCCcEEEEecCccccCCCEEEEEE
Confidence 999999999999987642 22345665555533 3455778778888888888766544
No 9
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.85 E-value=4.9e-21 Score=203.36 Aligned_cols=199 Identities=38% Similarity=0.649 Sum_probs=165.0
Q ss_pred ccccccccccchhHHhhhcchhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHH
Q 010913 259 NESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQ 338 (497)
Q Consensus 259 ~~~Yf~~y~~~~ih~~ml~d~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~ 338 (497)
...|+..|+....+..|+.+..+++.|.+.++......++.+|||||||+|.+++.+++.|+.+|+|+|+|+ +++.|++
T Consensus 120 ~~~~~~~y~~~~~~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~ 198 (480)
T 3b3j_A 120 AVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEV 198 (480)
T ss_dssp CCEEEEGGGCSCHHHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHH
T ss_pred hhhHHHHHhhhccchhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHH
Confidence 346777788777799999999999999999999887778999999999999999999999888999999999 9999999
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEE
Q 010913 339 IAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAI 418 (497)
Q Consensus 339 ~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~l 418 (497)
+++.+|+ .++|+++.+|+.++. + +++||+|+|+++++++..+..+. .+..+.++|||||.+
T Consensus 199 ~~~~~gl-------------~~~v~~~~~d~~~~~----~-~~~fD~Ivs~~~~~~~~~e~~~~-~l~~~~~~LkpgG~l 259 (480)
T 3b3j_A 199 LVKSNNL-------------TDRIVVIPGKVEEVS----L-PEQVDIIISEPMGYMLFNERMLE-SYLHAKKYLKPSGNM 259 (480)
T ss_dssp HHHHTTC-------------TTTEEEEESCTTTCC----C-SSCEEEEECCCCHHHHTCHHHHH-HHHHGGGGEEEEEEE
T ss_pred HHHHcCC-------------CCcEEEEECchhhCc----c-CCCeEEEEEeCchHhcCcHHHHH-HHHHHHHhcCCCCEE
Confidence 9999987 358999999998863 3 36899999998888776665555 555788999999999
Q ss_pred eccCceeEEeeecCCCC------CCCcc--ccccCccccccchHHHhhhcCCCeEeeeCCCcccccc
Q 010913 419 LPDTATMFVAGFGRGGT------SLPFW--ENVYGFTMSCVGREVVQDAAGIPIVDVVDDHDLVTDS 477 (497)
Q Consensus 419 i~~~~~~~~~~~~~~~~------~~~fw--~~v~g~~~~~~~~~~~~~~~~~p~v~~v~~~~l~t~~ 477 (497)
++...+.+..++..... ...|| ..++|++++.+......++|..|++++++.....+.+
T Consensus 260 i~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~~~~~~~f~~pvvd~~~~~~~y~~t 326 (480)
T 3b3j_A 260 FPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKS 326 (480)
T ss_dssp ESCEEEEEEEEECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHHHHHHHHTTSCEECCCCSTTBCSCC
T ss_pred EEEeceeeeeccCchHHHHHHhhccCccccccCCCcChhhhhhHHHHhccCCcEEEEeecccccchh
Confidence 99998888777653311 12467 3678999999998888888999999987766555443
No 10
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=99.83 E-value=1.4e-21 Score=210.61 Aligned_cols=192 Identities=15% Similarity=0.175 Sum_probs=150.0
Q ss_pred hhHHhhhcchhhhHHHHHHHHhCCC-CC----CCCEEEEEcCCCCHhHHHHHHcC--C------------CEEEEEeCCH
Q 010913 270 GIHREMISDKVRTDSYRQAILENPS-LM----KGAVVMDIGCGTGILSLFAAQAG--A------------SRVIAVEASE 330 (497)
Q Consensus 270 ~ih~~ml~d~~r~~~y~~~i~~~~~-~~----~~~~VLDvGCGtG~ls~~la~~G--~------------~~V~gvD~S~ 330 (497)
..++.|.+|.+|+..|+++|..+.. .. ++++|||||||+|++++++++++ + .+|+|||.|+
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH
T ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh
Confidence 4789999999999999999988742 22 35799999999999987654442 2 3999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCC-----CCceeEEEeccccccccChhhHHHHH
Q 010913 331 KMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQ-----PHSVDVLVSEWMGYCLLYESMLSSVL 405 (497)
Q Consensus 331 ~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~-----~~~fDvIvs~~~~~~l~~~~~l~~vL 405 (497)
.++..++.+. .||+ .++|++++++++++. ++ ++++|+|||+|||+++.++-+ ..+|
T Consensus 457 ~A~~~l~~~~-~Ng~-------------~d~VtVI~gd~eev~----lp~~~~~~ekVDIIVSElmGsfl~nEL~-pe~L 517 (745)
T 3ua3_A 457 NAIVTLKYMN-VRTW-------------KRRVTIIESDMRSLP----GIAKDRGFEQPDIIVSELLGSFGDNELS-PECL 517 (745)
T ss_dssp HHHHHHHHHH-HHTT-------------TTCSEEEESCGGGHH----HHHHHTTCCCCSEEEECCCBTTBGGGSH-HHHH
T ss_pred HHHHHHHHHH-hcCC-------------CCeEEEEeCchhhcc----cccccCCCCcccEEEEeccccccchhcc-HHHH
Confidence 7775445444 4777 468999999999985 33 689999999999999877744 4477
Q ss_pred HHHhccccCCcEEeccCceeEEeeecCCCCCCCccccccCccccccc------------------------hHHHhhhcC
Q 010913 406 FARDQWLKPGGAILPDTATMFVAGFGRGGTSLPFWENVYGFTMSCVG------------------------REVVQDAAG 461 (497)
Q Consensus 406 ~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~fw~~v~g~~~~~~~------------------------~~~~~~~~~ 461 (497)
..+.++|||||+++|+.++.+++++..+. +|.++++++++.+. ......++.
T Consensus 518 d~v~r~Lkp~Gi~iP~~~t~ylaPi~~~~----l~~~v~~~~~~~~~~G~p~~g~~~P~~~~~g~~i~~~~~~~~~~a~e 593 (745)
T 3ua3_A 518 DGVTGFLKPTTISIPQKYTSYVKPIMSTH----IHQTIKAQSIPYLSRAIPSHGRGEPELDEDEMWIQKYPQGHVRNNMD 593 (745)
T ss_dssp HTTGGGSCTTCEEESCEEEEEEEEEECHH----HHHHHHTCCCCGGGTTSCCSSSCCCEECTTSCEECCCTTCHHHHHHS
T ss_pred HHHHHhCCCCcEEECCccEEEEEEecCHH----HHHHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 78899999999999999999999997653 57777766543110 012445678
Q ss_pred CCeEeeeCCCccccc-chhhhHhh
Q 010913 462 IPIVDVVDDHDLVTD-SVVLQVSV 484 (497)
Q Consensus 462 ~p~v~~v~~~~l~t~-~~~i~~~~ 484 (497)
.|.|..+.+..++++ |..+.+|.
T Consensus 594 ~PyVv~l~~~~~Ls~~pq~vftFd 617 (745)
T 3ua3_A 594 QIYVVYLSKYIPLAETTKPVFTFE 617 (745)
T ss_dssp SCEEECCCSCEESSSSCEEEEEEE
T ss_pred ccEEEeeccceecCCCCceEEEEE
Confidence 999999999999999 77766554
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.64 E-value=1.5e-15 Score=148.49 Aligned_cols=155 Identities=18% Similarity=0.249 Sum_probs=112.8
Q ss_pred HHHHHhCCC-CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 286 RQAILENPS-LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 286 ~~~i~~~~~-~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
...++.... +.++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++...++ .+++++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~v~~ 100 (267)
T 3kkz_A 34 TLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL-------------QNRVTG 100 (267)
T ss_dssp HHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC-------------TTTEEE
T ss_pred HHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC-------------CcCcEE
Confidence 334444444 678999999999999999999999666999999999999999999999887 357999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCceeEEeeecCCCCCCCcccccc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATMFVAGFGRGGTSLPFWENVY 444 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~fw~~v~ 444 (497)
+.+|+.++ +++.++||+|++..+. .+. ++..++..+.++|||||.+++...+.... ........+|...+
T Consensus 101 ~~~d~~~~----~~~~~~fD~i~~~~~~---~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~ 170 (267)
T 3kkz_A 101 IVGSMDDL----PFRNEELDLIWSEGAI---YNI-GFERGLNEWRKYLKKGGYLAVSECSWFTD--ERPAEINDFWMDAY 170 (267)
T ss_dssp EECCTTSC----CCCTTCEEEEEESSCG---GGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSS--CCCHHHHHHHHHHC
T ss_pred EEcChhhC----CCCCCCEEEEEEcCCc---eec-CHHHHHHHHHHHcCCCCEEEEEEeeecCC--CChHHHHHHHHHhC
Confidence 99999886 4678899999987643 333 67889999999999999999665432110 01111122453333
Q ss_pred C--ccccccchHHHhhhcCCC
Q 010913 445 G--FTMSCVGREVVQDAAGIP 463 (497)
Q Consensus 445 g--~~~~~~~~~~~~~~~~~p 463 (497)
. .....+...+...+|...
T Consensus 171 ~~~~~~~~~~~~l~~aGf~~v 191 (267)
T 3kkz_A 171 PEIDTIPNQVAKIHKAGYLPV 191 (267)
T ss_dssp TTCEEHHHHHHHHHHTTEEEE
T ss_pred CCCCCHHHHHHHHHHCCCEEE
Confidence 2 234456666666665533
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.64 E-value=1.1e-15 Score=149.83 Aligned_cols=107 Identities=21% Similarity=0.333 Sum_probs=87.8
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-C--CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-G--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G--~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
+.+|.+|||||||||.++..+++. + ..+|+|||+|+.|++.|++++...+. ..+|+++++|+.+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-------------~~~v~~~~~D~~~ 134 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-------------PTPVDVIEGDIRD 134 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-------------SSCEEEEESCTTT
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-------------CceEEEeeccccc
Confidence 468999999999999999999986 1 13899999999999999999988776 3589999999988
Q ss_pred cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+ +.++||+|++....+++ ...+...+|.+++++|||||.+++.
T Consensus 135 ~------~~~~~d~v~~~~~l~~~-~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 135 I------AIENASMVVLNFTLQFL-EPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp C------CCCSEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c------cccccccceeeeeeeec-CchhHhHHHHHHHHHcCCCcEEEEE
Confidence 6 23569999976533322 3445678999999999999999854
No 13
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.64 E-value=1.1e-15 Score=147.91 Aligned_cols=114 Identities=23% Similarity=0.369 Sum_probs=96.9
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
....+.......++.+|||||||+|.++..+++.|..+|+|+|+|+.+++.|+++.. ..++.+
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-----------------~~~~~~ 94 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-----------------SPVVCY 94 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-----------------CTTEEE
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-----------------cCCeEE
Confidence 344566666667899999999999999999999987799999999999999998753 147999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.+|+.++ +++.++||+|++.. ++.+..++..+|.++.++|||||.+++..
T Consensus 95 ~~~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 95 EQKAIEDI----AIEPDAYNVVLSSL---ALHYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EECCGGGC----CCCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhC----CCCCCCeEEEEEch---hhhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 99999886 46789999999765 55555788999999999999999999754
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.64 E-value=1.6e-15 Score=146.89 Aligned_cols=152 Identities=20% Similarity=0.314 Sum_probs=111.1
Q ss_pred HHHHhCC-CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 287 QAILENP-SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 287 ~~i~~~~-~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
..++... .+.++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++..+++ .++++++
T Consensus 35 ~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------------~~~~~~~ 101 (257)
T 3f4k_A 35 RKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC-------------ADRVKGI 101 (257)
T ss_dssp HHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC-------------TTTEEEE
T ss_pred HHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC-------------CCceEEE
Confidence 3344443 5678899999999999999999999545999999999999999999999887 3579999
Q ss_pred ecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCceeEEeeecCCCCCCCccccccC
Q 010913 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATMFVAGFGRGGTSLPFWENVYG 445 (497)
Q Consensus 366 ~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~fw~~v~g 445 (497)
++|+.++ +++.++||+|++.. ++.+. ++..++..+.++|||||.+++...+.... ........+|...+.
T Consensus 102 ~~d~~~~----~~~~~~fD~v~~~~---~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~ 171 (257)
T 3f4k_A 102 TGSMDNL----PFQNEELDLIWSEG---AIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTS--ERPAEIEDFWMDAYP 171 (257)
T ss_dssp ECCTTSC----SSCTTCEEEEEEES---CSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSS--CCCHHHHHHHHHHCT
T ss_pred ECChhhC----CCCCCCEEEEEecC---hHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCC--CChHHHHHHHHHhCC
Confidence 9999876 47788999999875 34444 67889999999999999999665432110 011111234544332
Q ss_pred --ccccccchHHHhhhcC
Q 010913 446 --FTMSCVGREVVQDAAG 461 (497)
Q Consensus 446 --~~~~~~~~~~~~~~~~ 461 (497)
.....+...+..++|.
T Consensus 172 ~~~~~~~~~~~l~~aGf~ 189 (257)
T 3f4k_A 172 EISVIPTCIDKMERAGYT 189 (257)
T ss_dssp TCCBHHHHHHHHHHTTEE
T ss_pred CCCCHHHHHHHHHHCCCe
Confidence 2344556666666654
No 15
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.63 E-value=1.7e-15 Score=146.62 Aligned_cols=117 Identities=17% Similarity=0.181 Sum_probs=98.2
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
.....++....+.++.+|||||||+|.++..+++. |. +|+|+|+|+.+++.|++++...|+ .+++
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~-------------~~~v 88 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGV-------------SERV 88 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTC-------------TTTE
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCC-------------Ccce
Confidence 34455566667788999999999999999999987 55 999999999999999999988887 2589
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.++++|+.++. + .++||+|++.. ++.+..++..+|.++.++|||||.+++..
T Consensus 89 ~~~~~d~~~~~----~-~~~fD~V~~~~---~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 89 HFIHNDAAGYV----A-NEKCDVAACVG---ATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEEESCCTTCC----C-SSCEEEEEEES---CGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEEECChHhCC----c-CCCCCEEEECC---ChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 99999998863 4 78999999754 44455678899999999999999998644
No 16
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.63 E-value=7.9e-16 Score=152.27 Aligned_cols=153 Identities=20% Similarity=0.177 Sum_probs=110.3
Q ss_pred cccccccccchhHHhhhcchhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Q 010913 260 ESYFGSYSSFGIHREMISDKVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQI 339 (497)
Q Consensus 260 ~~Yf~~y~~~~ih~~ml~d~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~ 339 (497)
..||+.+..--+...+.....++..+++.+...+...++.+|||||||+|.++..+++.|+ +|+|+|+|+.|++.|+++
T Consensus 20 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~ 98 (293)
T 3thr_A 20 DQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKE 98 (293)
T ss_dssp CTTTTCHHHHHHHHHHTCCSCBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHH
T ss_pred hhhcCchHHHHHHHHHhcCcchHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHh
Confidence 3455443332233333334567778888887776667889999999999999999999988 999999999999999988
Q ss_pred HHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEec-cccccccC----hhhHHHHHHHHhccccC
Q 010913 340 AKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSE-WMGYCLLY----ESMLSSVLFARDQWLKP 414 (497)
Q Consensus 340 ~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~-~~~~~l~~----~~~l~~vL~~~~r~Lkp 414 (497)
+...+.. ....++.+..+++..+...+ ++.++||+|++. .+...+.. ...+..++.++.++|||
T Consensus 99 ~~~~~~~----------~~~~~~~~~~~d~~~~~~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp 167 (293)
T 3thr_A 99 RWNRRKE----------PAFDKWVIEEANWLTLDKDV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP 167 (293)
T ss_dssp HHHTTTS----------HHHHTCEEEECCGGGHHHHS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE
T ss_pred hhhcccc----------cccceeeEeecChhhCcccc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC
Confidence 7544321 00136789999988763211 567899999985 32222222 24489999999999999
Q ss_pred CcEEeccCce
Q 010913 415 GGAILPDTAT 424 (497)
Q Consensus 415 gG~li~~~~~ 424 (497)
||.+++...+
T Consensus 168 gG~l~~~~~~ 177 (293)
T 3thr_A 168 GGLLVIDHRN 177 (293)
T ss_dssp EEEEEEEEEC
T ss_pred CeEEEEEeCC
Confidence 9999966543
No 17
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.62 E-value=1.2e-15 Score=148.42 Aligned_cols=106 Identities=22% Similarity=0.254 Sum_probs=92.6
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++...++ .++.++.+|++++
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--------------~~v~~~~~d~~~l- 97 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGH--------------QQVEYVQGDAEQM- 97 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEEECCC-CC-
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC--------------CceEEEEecHHhC-
Confidence 456889999999999999999999876 999999999999999999988876 5799999999886
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
++++++||+|++.. ++.+..++..+|.++.++|||||.+++.
T Consensus 98 ---~~~~~~fD~V~~~~---~l~~~~d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 98 ---PFTDERFHIVTCRI---AAHHFPNPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ---CSCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCCCEEEEEEhh---hhHhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 47789999999765 5556678889999999999999999853
No 18
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.62 E-value=1.8e-15 Score=139.46 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=88.1
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++++.+++ +++++++++...+.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~~~-~v~~vD~s~~~l~~a~~~~~~~~~--------------~~v~~~~~~~~~l~- 83 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGLSK-KVYAFDVQEQALGKTSQRLSDLGI--------------ENTELILDGHENLD- 83 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHHTC--------------CCEEEEESCGGGGG-
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC--------------CcEEEEeCcHHHHH-
Confidence 46789999999999999999999854 999999999999999999988876 58999998888764
Q ss_pred ccCCCCCceeEEEecccccccc-------ChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLL-------YESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~-------~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.+.+++||+|+++. ++... .......++.++.++|||||.+++.
T Consensus 84 --~~~~~~fD~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 84 --HYVREPIRAAIFNL-GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp --GTCCSCEEEEEEEE-C-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --hhccCCcCEEEEeC-CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 24577899999763 32221 3355667889999999999999843
No 19
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.62 E-value=8.5e-16 Score=145.51 Aligned_cols=173 Identities=12% Similarity=0.114 Sum_probs=110.1
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.+++.|++++..+++.. ....+++++.+|+...
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~---------~~~~~v~~~~~d~~~~-- 96 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPE---------MQRKRISLFQSSLVYR-- 96 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCH---------HHHTTEEEEECCSSSC--
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhcccc---------ccCcceEEEeCccccc--
Confidence 4678999999999999999999853 599999999999999999987766510 0002799999998665
Q ss_pred ccCCCCCceeEEEeccccccccChh--hHHHHHHHHhccccCCcEEeccCceeEEeeecC-CCCCCCccccccCcccccc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYES--MLSSVLFARDQWLKPGGAILPDTATMFVAGFGR-GGTSLPFWENVYGFTMSCV 451 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~--~l~~vL~~~~r~LkpgG~li~~~~~~~~~~~~~-~~~~~~fw~~v~g~~~~~~ 451 (497)
+.+.++||+|++.. ++.+.. .+..++..+.++|||||+++......+...+.. ...........+++....+
T Consensus 97 --~~~~~~fD~V~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (219)
T 3jwg_A 97 --DKRFSGYDAATVIE---VIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEF 171 (219)
T ss_dssp --CGGGTTCSEEEEES---CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHH
T ss_pred --ccccCCCCEEEEHH---HHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHH
Confidence 35568999999765 344434 457899999999999997763322221111110 0001111223333444445
Q ss_pred c----hHHHhhhcCCCeEeeeCCCcccccchhhhHhh
Q 010913 452 G----REVVQDAAGIPIVDVVDDHDLVTDSVVLQVSV 484 (497)
Q Consensus 452 ~----~~~~~~~~~~p~v~~v~~~~l~t~~~~i~~~~ 484 (497)
. ..+...++......+-+....+..+..+..|.
T Consensus 172 ~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~ 208 (219)
T 3jwg_A 172 QTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFT 208 (219)
T ss_dssp HHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEE
T ss_pred HHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEe
Confidence 4 44445555444444444444455555544443
No 20
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.62 E-value=3.4e-15 Score=146.03 Aligned_cols=119 Identities=20% Similarity=0.246 Sum_probs=101.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.++....+.++.+|||||||+|.++..+++....+|+|+|+|+.+++.|++++...++ .+++.
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~~~ 114 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL-------------ANRVT 114 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC-------------TTTEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC-------------CcceE
Confidence 45566667777788999999999999999999986334999999999999999999988887 35799
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.+|+.++ +++.++||+|++.. ++.+..++..+|.++.++|||||.+++..
T Consensus 115 ~~~~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 115 FSYADAMDL----PFEDASFDAVWALE---SLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEECCTTSC----CSCTTCEEEEEEES---CTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEECccccC----CCCCCCccEEEEec---hhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 999999886 47788999999765 55566778999999999999999998654
No 21
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.62 E-value=7.4e-16 Score=145.82 Aligned_cols=112 Identities=18% Similarity=0.173 Sum_probs=88.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+++.. ....++.++.+|+...
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~---------~~~~~v~~~~~d~~~~-- 96 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPR---------NQWERLQLIQGALTYQ-- 96 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCH---------HHHTTEEEEECCTTSC--
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCc---------ccCcceEEEeCCcccc--
Confidence 567899999999999999999984 3699999999999999999988777610 0012799999998655
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+.+.++||+|++..+.+.+ ....+..++..+.++|||||+++..
T Consensus 97 --~~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 97 --DKRFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp --CGGGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred --cccCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 3456799999976533332 3335589999999999999987743
No 22
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.62 E-value=1.6e-15 Score=140.63 Aligned_cols=108 Identities=22% Similarity=0.333 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||+|||+|.+++.+++.|+.+|+|+|+|+.+++.|++++..+++ ++++++++|+.++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~v~~~~~d~~~~~~- 107 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL--------------SGATLRRGAVAAVVA- 107 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC--------------SCEEEEESCHHHHHH-
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC--------------CceEEEEccHHHHHh-
Confidence 57899999999999999988888888999999999999999999998876 589999999988741
Q ss_pred cCCCCCceeEEEeccccccccC-hhhHHHHHHHHhc--cccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLY-ESMLSSVLFARDQ--WLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~-~~~l~~vL~~~~r--~LkpgG~li~~~ 422 (497)
.++.++||+|++++. +.+ ...+..++..+.+ +|+|||++++..
T Consensus 108 -~~~~~~fD~i~~~~p---~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 108 -AGTTSPVDLVLADPP---YNVDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp -HCCSSCCSEEEECCC---TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred -hccCCCccEEEECCC---CCcchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 134689999998763 222 3677889999988 999999999644
No 23
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.61 E-value=6.6e-16 Score=145.34 Aligned_cols=118 Identities=15% Similarity=0.080 Sum_probs=85.6
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.+.++.+|||+|||+|..+..+++.|. +|+|||+|+.|++.|+++........ ...........+++++++|+.++.
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHIT--SQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEE--EETTEEEEECSSSEEEEECCSSST
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccc--cccccccccCCccEEEECccccCC
Confidence 456789999999999999999999988 99999999999999998754210000 000000000247999999998863
Q ss_pred cccCCCC-CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 374 ESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 374 ~~l~~~~-~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
++. ++||+|++....+. .+..+...++.++.++|||||.++
T Consensus 96 ----~~~~~~fD~v~~~~~l~~-l~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 96 ----ARDIGHCAAFYDRAAMIA-LPADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp ----HHHHHSEEEEEEESCGGG-SCHHHHHHHHHHHHHHSCSEEEEE
T ss_pred ----cccCCCEEEEEECcchhh-CCHHHHHHHHHHHHHHcCCCcEEE
Confidence 333 68999998643322 345567789999999999999844
No 24
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.59 E-value=3.3e-15 Score=140.41 Aligned_cols=116 Identities=23% Similarity=0.383 Sum_probs=95.8
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
..+.++......++ +|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++...++ .+++++
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-------------~~~~~~ 97 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL-------------NDRIQI 97 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC-------------TTTEEE
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc-------------cCceEE
Confidence 33444444444455 9999999999999999998334999999999999999999998887 358999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+++|+.++ +++.++||+|++.. ++.+..++..++.++.++|||||.+++.
T Consensus 98 ~~~d~~~~----~~~~~~~D~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 98 VQGDVHNI----PIEDNYADLIVSRG---SVFFWEDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EECBTTBC----SSCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCHHHC----CCCcccccEEEECc---hHhhccCHHHHHHHHHHhCCCCCEEEEE
Confidence 99999886 47788999999765 4555578899999999999999999854
No 25
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.59 E-value=2.8e-15 Score=146.17 Aligned_cols=112 Identities=15% Similarity=-0.022 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHh----------CCCCCCCCCCCCCCCCCCceEEE
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKD----------NDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~----------~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
.++.+|||+|||+|..+..+|+.|. +|+|||+|+.|++.|++.... +++. .+ .....+|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~i~~~ 138 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAK----VF---KSSSGSISLY 138 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCE----EE---EETTSSEEEE
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhccccccccccccccccc----cc---ccCCCceEEE
Confidence 5788999999999999999999998 999999999999999766421 0000 00 0012579999
Q ss_pred ecchhhcccccCCC-CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 366 QGMVEELGESMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 366 ~gd~~~l~~~l~~~-~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++|+.++. .+ .++||+|++......+ +..+...++..+.++|||||++++
T Consensus 139 ~~D~~~l~----~~~~~~FD~V~~~~~l~~l-~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 139 CCSIFDLP----RANIGKFDRIWDRGALVAI-NPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp ESCTTTGG----GGCCCCEEEEEESSSTTTS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred ECccccCC----cccCCCEEEEEEhhhhhhC-CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 99999874 33 3799999986533333 456778899999999999999863
No 26
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.59 E-value=4.2e-15 Score=147.48 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=94.4
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.+.++.+|||||||+|.++..+++. |+ +|+|+|+|+.+++.|++++...++ .++++++.+|+.++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGL-------------ADNITVKYGSFLEI 144 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTC-------------TTTEEEEECCTTSC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC-------------CcceEEEEcCcccC
Confidence 6678899999999999999999988 77 999999999999999999988776 35899999999886
Q ss_pred ccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+++.++||+|++.. ++.+..++..+|.++.++|||||.+++..
T Consensus 145 ----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 145 ----PCEDNSYDFIWSQD---AFLHSPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp ----SSCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCCCCEeEEEecc---hhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 47788999999765 45555678999999999999999998554
No 27
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.59 E-value=7.9e-15 Score=146.94 Aligned_cols=114 Identities=18% Similarity=0.256 Sum_probs=97.5
Q ss_pred HHHHhCCC-CCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 287 QAILENPS-LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 287 ~~i~~~~~-~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
+.++..+. +.++.+|||||||+|.++..+++. |+ +|+|+|+|+.+++.|++++..+++ .+++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~v~~ 171 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRI-------------DDHVRS 171 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTC-------------TTTEEE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCC-------------CCceEE
Confidence 45666665 788999999999999999999998 76 899999999999999999999987 358999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.+|+.++ +++.++||+|++.. ++.+. ++..+|.++.++|||||.+++.+
T Consensus 172 ~~~d~~~~----~~~~~~fD~V~~~~---~l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 172 RVCNMLDT----PFDKGAVTASWNNE---STMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EECCTTSC----CCCTTCEEEEEEES---CGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECChhcC----CCCCCCEeEEEECC---chhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 99999886 47788999999765 33344 38899999999999999998543
No 28
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.59 E-value=1.4e-14 Score=139.91 Aligned_cols=117 Identities=28% Similarity=0.431 Sum_probs=94.6
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
..++......++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.|++++...++ ++.+++
T Consensus 31 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~---------------~v~~~~ 94 (252)
T 1wzn_A 31 EEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL---------------KIEFLQ 94 (252)
T ss_dssp HHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC---------------CCEEEE
T ss_pred HHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC---------------ceEEEE
Confidence 3344444446778999999999999999999987 999999999999999999887764 689999
Q ss_pred cchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 367 gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
+|+.++. + +++||+|++............+..++..+.++|||||.++++..+
T Consensus 95 ~d~~~~~----~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 95 GDVLEIA----F-KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCGGGCC----C-CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CChhhcc----c-CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 9998863 3 468999997532233345567889999999999999999976543
No 29
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.59 E-value=6e-15 Score=145.57 Aligned_cols=107 Identities=23% Similarity=0.283 Sum_probs=92.3
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++...++ ..+++++.+|+.++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~--- 130 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGV-------------SDNMQFIHCAAQDVA--- 130 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CC-------------GGGEEEEESCGGGTG---
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-------------CcceEEEEcCHHHhh---
Confidence 478999999999999999999977 999999999999999999988876 258999999999874
Q ss_pred CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+++.++||+|++.. ++.+..++..+|.++.++|||||.+++...
T Consensus 131 ~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 131 SHLETPVDLILFHA---VLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GGCSSCEEEEEEES---CGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhcCCCceEEEECc---hhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 35678999999765 555567788999999999999999986543
No 30
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.59 E-value=3.5e-15 Score=140.84 Aligned_cols=117 Identities=16% Similarity=0.168 Sum_probs=95.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+...+.......++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++... ++++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~----------------~~~~ 100 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRW----------------SHIS 100 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTC----------------SSEE
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccC----------------CCeE
Confidence 4455555555667789999999999999999999986 9999999999999999886543 3799
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++++|+.++. +.++||+|++..+.+.+.....+..++.++.++|||||.+++.+
T Consensus 101 ~~~~d~~~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 101 WAATDILQFS-----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEECCTTTCC-----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEcchhhCC-----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999998872 57899999987654444444555788999999999999998543
No 31
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.59 E-value=1.5e-14 Score=144.17 Aligned_cols=119 Identities=24% Similarity=0.195 Sum_probs=98.5
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
...+.++....+.++.+|||||||+|.++..+++. |+ +|+|+|+|+.+++.|++++...++ .+++
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~v 124 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDS-------------PRRK 124 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCC-------------SSCE
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCC-------------CCce
Confidence 34456677777889999999999999999999998 85 999999999999999999999887 3589
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccC------hhhHHHHHHHHhccccCCcEEeccCc
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLY------ESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~------~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+++.+|+.++ .++||+|++..+...+.. ......++.++.++|||||.+++...
T Consensus 125 ~~~~~d~~~~-------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 125 EVRIQGWEEF-------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp EEEECCGGGC-------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred EEEECCHHHc-------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 9999999763 578999998764433322 15568999999999999999995443
No 32
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.59 E-value=4.2e-15 Score=143.08 Aligned_cols=111 Identities=23% Similarity=0.306 Sum_probs=95.3
Q ss_pred HHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
++....+.++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++..+++ .++.++.+|
T Consensus 13 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v~~~~~d 77 (239)
T 1xxl_A 13 MIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGV--------------ENVRFQQGT 77 (239)
T ss_dssp HHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTC--------------CSEEEEECB
T ss_pred HHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC--------------CCeEEEecc
Confidence 33444567899999999999999999999876 999999999999999999988776 579999999
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
++.+ +++.++||+|++.. ++.+..++..++.++.++|||||.+++.
T Consensus 78 ~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 78 AESL----PFPDDSFDIITCRY---AAHHFSDVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp TTBC----CSCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccC----CCCCCcEEEEEECC---chhhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 9886 47788999999764 4555567889999999999999999853
No 33
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=3.4e-15 Score=143.95 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=92.3
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.+|.+|||||||+|..+..+++.+..+|+|||+|+.+++.|+++....+. ++.++.+++..+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~---------------~~~~~~~~a~~~~-- 121 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTH---------------KVIPLKGLWEDVA-- 121 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSS---------------EEEEEESCHHHHG--
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCC---------------ceEEEeehHHhhc--
Confidence 57899999999999999999988555899999999999999999877764 7899999998764
Q ss_pred cCCCCCceeEEEeccc--cccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 376 MQIQPHSVDVLVSEWM--GYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~--~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.+++.++||.|+...+ .+.+.+..++..++.++.|+|||||+|++.
T Consensus 122 ~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 122 PTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 2467889999986532 345667778899999999999999999854
No 34
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.58 E-value=3.8e-15 Score=140.77 Aligned_cols=112 Identities=19% Similarity=0.255 Sum_probs=94.9
Q ss_pred HHhCCCCCCCCEEEEEcCCCCHhHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAG--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G--~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
++....+.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+++ .++.++.
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~~~~~~ 94 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL--------------KNVEVLK 94 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC--------------TTEEEEE
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC--------------CcEEEEe
Confidence 3333456788999999999999999999985 34999999999999999999988876 4799999
Q ss_pred cchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 367 gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+|+.++ +++.++||+|++.. ++.+..++..++.++.++|||||.+++.
T Consensus 95 ~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 95 SEENKI----PLPDNTVDFIFMAF---TFHELSEPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp CBTTBC----SSCSSCEEEEEEES---CGGGCSSHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccC----CCCCCCeeEEEeeh---hhhhcCCHHHHHHHHHHHhCCCeEEEEE
Confidence 999886 46788999999765 4555567889999999999999999854
No 35
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.58 E-value=1.1e-14 Score=142.81 Aligned_cols=118 Identities=19% Similarity=0.298 Sum_probs=100.9
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
.+.+.+.....+.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+++ .++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~~ 89 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI--------------KNV 89 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC--------------CSE
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CCc
Confidence 455666666777889999999999999999999983 45999999999999999999988886 579
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.++.+|+.++ +++.++||+|++.. ++.+..++..++..+.++|||||.+++..
T Consensus 90 ~~~~~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 90 KFLQANIFSL----PFEDSSFDHIFVCF---VLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEEECCGGGC----CSCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcccccC----CCCCCCeeEEEEec---hhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999999986 47788999999765 55566777899999999999999998543
No 36
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.57 E-value=1.6e-14 Score=139.40 Aligned_cols=116 Identities=16% Similarity=0.185 Sum_probs=95.6
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+...++......++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++... .++.
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------~~~~ 143 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM----------------PVGK 143 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS----------------SEEE
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC----------------CceE
Confidence 344556666666788999999999999999999887668999999999999999886432 3799
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEeccC
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.+++.++ +++.++||+|++.. ++.+. .++..+|..+.++|||||.+++..
T Consensus 144 ~~~~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 144 FILASMETA----TLPPNTYDLIVIQW---TAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEESCGGGC----CCCSSCEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEccHHHC----CCCCCCeEEEEEcc---hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 999999886 46778999999765 44444 568899999999999999999654
No 37
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.57 E-value=2.8e-15 Score=146.50 Aligned_cols=105 Identities=23% Similarity=0.238 Sum_probs=85.1
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
+.+.|.... ..+.+|||||||+|.++..+++.|. +|+|||+|+.|++.|++. .+|.+
T Consensus 29 l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~--------------------~~v~~ 85 (257)
T 4hg2_A 29 LFRWLGEVA--PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH--------------------PRVTY 85 (257)
T ss_dssp HHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC--------------------TTEEE
T ss_pred HHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc--------------------CCcee
Confidence 334444433 3467999999999999999999986 999999999999866532 47999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++++++++ ++++++||+|++.. ++++. ++..++.++.|+|||||+|++
T Consensus 86 ~~~~~e~~----~~~~~sfD~v~~~~---~~h~~-~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 86 AVAPAEDT----GLPPASVDVAIAAQ---AMHWF-DLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp EECCTTCC----CCCSSCEEEEEECS---CCTTC-CHHHHHHHHHHHEEEEEEEEE
T ss_pred ehhhhhhh----cccCCcccEEEEee---ehhHh-hHHHHHHHHHHHcCCCCEEEE
Confidence 99999987 58899999999754 44333 577899999999999999874
No 38
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.57 E-value=1.5e-14 Score=134.14 Aligned_cols=107 Identities=21% Similarity=0.287 Sum_probs=89.9
Q ss_pred CCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 293 PSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
....++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.|++++..+++ .++.++.+|+.++
T Consensus 28 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--------------~~~~~~~~d~~~~ 92 (199)
T 2xvm_A 28 VKVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENL--------------DNLHTRVVDLNNL 92 (199)
T ss_dssp TTTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC--------------TTEEEEECCGGGC
T ss_pred hhccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCC--------------CCcEEEEcchhhC
Confidence 3445778999999999999999999977 999999999999999999887775 4799999999886
Q ss_pred ccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
. + .++||+|++..+.+.+ ....+..++..+.++|||||.+++
T Consensus 93 ~----~-~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 93 T----F-DRQYDFILSTVVLMFL-EAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp C----C-CCCEEEEEEESCGGGS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred C----C-CCCceEEEEcchhhhC-CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3 5 7899999987533322 234788999999999999999763
No 39
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.57 E-value=1e-14 Score=139.77 Aligned_cols=106 Identities=21% Similarity=0.243 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++...++ ++.++++|+.++.
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~-- 97 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL---------------KPRLACQDISNLN-- 97 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC---------------CCEEECCCGGGCC--
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC---------------CeEEEecccccCC--
Confidence 3788999999999999999999986 899999999999999999877654 6899999998863
Q ss_pred cCCCCCceeEEEecc-ccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs~~-~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++ ++||+|++.. ....+....++..+|..+.++|||||.++++.
T Consensus 98 --~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 98 --IN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp --CS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --cc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 44 8899999764 43333344788999999999999999999644
No 40
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.57 E-value=1.9e-15 Score=147.93 Aligned_cols=163 Identities=15% Similarity=0.179 Sum_probs=103.5
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCC--------CCCCCCCC-------CC
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWD--------RPQSEGNI-------NN 358 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~--------~~~~~~~~-------~~ 358 (497)
...+|.+|||||||+|+++..+++.|+.+|+|+|+|+.|++.|+++++.+..... .......+ ..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4567899999999999999888888887899999999999999998765421000 00000000 00
Q ss_pred CCceE-EEecchhhcccccCC---CCCceeEEEeccccccc-cChhhHHHHHHHHhccccCCcEEeccCc---eeEEeee
Q 010913 359 AGKME-VVQGMVEELGESMQI---QPHSVDVLVSEWMGYCL-LYESMLSSVLFARDQWLKPGGAILPDTA---TMFVAGF 430 (497)
Q Consensus 359 ~~~i~-~i~gd~~~l~~~l~~---~~~~fDvIvs~~~~~~l-~~~~~l~~vL~~~~r~LkpgG~li~~~~---~~~~~~~ 430 (497)
..++. ++++|+.+.. ++ ..++||+|++..+.+++ .+..++..++.++.++|||||.|++... +.+. .
T Consensus 132 ~~~i~~~~~~D~~~~~---~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~--~ 206 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGN---PLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM--V 206 (263)
T ss_dssp HHHEEEEEECCTTSSS---TTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE--E
T ss_pred HhhhheEEeccccCCC---CCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce--e
Confidence 11344 8899988742 22 25689999987643322 3346778899999999999999996531 1110 0
Q ss_pred cCCCCCCCccccccCccccccchHHHhhhcCCCeEee
Q 010913 431 GRGGTSLPFWENVYGFTMSCVGREVVQDAAGIPIVDV 467 (497)
Q Consensus 431 ~~~~~~~~fw~~v~g~~~~~~~~~~~~~~~~~p~v~~ 467 (497)
+. .. | ..+.+....+...+...+|....+..
T Consensus 207 g~----~~-~-~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 207 GK----RE-F-SCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp TT----EE-E-ECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CC----eE-e-eccccCHHHHHHHHHHCCCEEEEEee
Confidence 00 00 1 12234555677777777765433333
No 41
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.56 E-value=3e-14 Score=140.59 Aligned_cols=117 Identities=21% Similarity=0.254 Sum_probs=97.7
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
...+.++....+.++.+|||||||+|.++..+++. |. +|+|+|+|+.+++.|++++...++ ..++
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~-------------~~~~ 116 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSEN-------------LRSK 116 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCC-------------CSCE
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCC-------------CCCe
Confidence 45566777777888999999999999999999954 77 999999999999999999988776 3589
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEeccCce
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
.++.+|+.++ + ++||+|++.. ++.+. .++..++.++.++|||||.+++....
T Consensus 117 ~~~~~d~~~~------~-~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 117 RVLLAGWEQF------D-EPVDRIVSIG---AFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp EEEESCGGGC------C-CCCSEEEEES---CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEEECChhhC------C-CCeeEEEEeC---chhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9999999764 3 7899999765 44444 57889999999999999999965443
No 42
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.56 E-value=1.4e-14 Score=143.08 Aligned_cols=113 Identities=21% Similarity=0.216 Sum_probs=94.5
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||||||+|.++..+++.|..+|+|+|+|+.+++.|++++...++ ..++.++++|+.++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~- 127 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR-------------RFKVFFRAQDSYGRH- 127 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC-------------SSEEEEEESCTTTSC-
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC-------------CccEEEEECCccccc-
Confidence 467899999999999999999988877999999999999999999987765 257999999998863
Q ss_pred ccCC-CCCceeEEEecccc-ccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 375 SMQI-QPHSVDVLVSEWMG-YCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 375 ~l~~-~~~~fDvIvs~~~~-~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
+ +.++||+|++.... +.+.+..++..+|.++.++|||||.+++..++
T Consensus 128 ---~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 128 ---MDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp ---CCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ---cCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5 57899999986532 22245678899999999999999999965543
No 43
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.56 E-value=8.6e-15 Score=140.58 Aligned_cols=110 Identities=16% Similarity=0.188 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.|+++....+ .++.++++++.++.
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---------------~~v~~~~~d~~~~~-- 121 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT---------------HKVIPLKGLWEDVA-- 121 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS---------------SEEEEEESCHHHHG--
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC---------------CCeEEEecCHHHhh--
Confidence 5788999999999999999988766699999999999999999887665 37999999999872
Q ss_pred cCCCCCceeEEEe-ccc-cccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVS-EWM-GYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs-~~~-~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.+++.++||+|++ .+. .....+...+..++.++.++|||||++++..
T Consensus 122 ~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 122 PTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1367889999998 322 1222334556688999999999999998543
No 44
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.56 E-value=2.7e-14 Score=135.30 Aligned_cols=120 Identities=23% Similarity=0.333 Sum_probs=98.7
Q ss_pred hhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 010913 281 RTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (497)
Q Consensus 281 r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~ 360 (497)
+...+.+.+.... .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..++ .
T Consensus 24 ~~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---------------~ 85 (227)
T 1ve3_A 24 RIETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE---------------S 85 (227)
T ss_dssp HHHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------C
T ss_pred HHHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC---------------C
Confidence 3456666776655 3488999999999999999999987 99999999999999999987765 3
Q ss_pred ceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 361 ~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+++++.+|+.++ +++.++||+|++... ..+.+..++..++..+.++|||||.+++...
T Consensus 86 ~~~~~~~d~~~~----~~~~~~~D~v~~~~~-~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 86 NVEFIVGDARKL----SFEDKTFDYVIFIDS-IVHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CCEEEECCTTSC----CSCTTCEEEEEEESC-GGGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceEEECchhcC----CCCCCcEEEEEEcCc-hHhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 789999999886 366789999998753 1245667788999999999999999985433
No 45
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.56 E-value=1.8e-14 Score=134.50 Aligned_cols=139 Identities=17% Similarity=0.223 Sum_probs=101.8
Q ss_pred CCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccC
Q 010913 298 GAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (497)
Q Consensus 298 ~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~ 377 (497)
+.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|+++. .++.++.+|+.++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~~---- 97 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-------------------PSVTFHHGTITDLS---- 97 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-------------------TTSEEECCCGGGGG----
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-------------------CCCeEEeCcccccc----
Confidence 78999999999999999999987 8999999999999998772 47899999998873
Q ss_pred CCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEeccCceeEE-eeecCCCCCCCccccccCccccccchH
Q 010913 378 IQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILPDTATMFV-AGFGRGGTSLPFWENVYGFTMSCVGRE 454 (497)
Q Consensus 378 ~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~~~~~~~~-~~~~~~~~~~~fw~~v~g~~~~~~~~~ 454 (497)
++.++||+|++.. ++.+. .++..+|.++.++|||||.+++....... ..+.. .+...+.+....+...
T Consensus 98 ~~~~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 168 (203)
T 3h2b_A 98 DSPKRWAGLLAWY---SLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYH------PVATAYRWPLPELAQA 168 (203)
T ss_dssp GSCCCEEEEEEES---SSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECC------SSSCEEECCHHHHHHH
T ss_pred cCCCCeEEEEehh---hHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhc------hhhhhccCCHHHHHHH
Confidence 6788999999765 44444 47899999999999999999854322110 01100 1112223456667777
Q ss_pred HHhhhcCCCeEeeeC
Q 010913 455 VVQDAAGIPIVDVVD 469 (497)
Q Consensus 455 ~~~~~~~~p~v~~v~ 469 (497)
+...+|....+....
T Consensus 169 l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 169 LETAGFQVTSSHWDP 183 (203)
T ss_dssp HHHTTEEEEEEEECT
T ss_pred HHHCCCcEEEEEecC
Confidence 777776544444333
No 46
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.56 E-value=1.2e-14 Score=141.05 Aligned_cols=113 Identities=20% Similarity=0.330 Sum_probs=95.4
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 286 ~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
.+.++....+.++.+|||||||+|.++..+++. |. +|+|+|+|+.+++.|++++... .++++
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~----------------~~~~~ 106 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN----------------NKIIF 106 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC----------------TTEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC----------------CCeEE
Confidence 455666777788999999999999999999998 66 9999999999999998775332 47999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEeccC
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.+|+.++ +++.++||+|++.. ++.+. .++..++.++.++|||||.+++..
T Consensus 107 ~~~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 107 EANDILTK----EFPENNFDLIYSRD---AILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EECCTTTC----CCCTTCEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECccccC----CCCCCcEEEEeHHH---HHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999886 47789999999765 45555 788999999999999999998554
No 47
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.56 E-value=7.2e-15 Score=138.02 Aligned_cols=111 Identities=19% Similarity=0.201 Sum_probs=89.7
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
++.+|||+|||+|.+++.+++.|+.+|+|+|+|+.+++.|++++..+++. .++++++.+|+.++..
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~------------~~~v~~~~~d~~~~~~-- 118 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS------------SEQAEVINQSSLDFLK-- 118 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC------------TTTEEEECSCHHHHTT--
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC------------ccceEEEECCHHHHHH--
Confidence 67899999999999999988888779999999999999999999988862 1479999999988631
Q ss_pred CCCCCc-eeEEEeccccccccChhhHHHHHHHH--hccccCCcEEeccCcee
Q 010913 377 QIQPHS-VDVLVSEWMGYCLLYESMLSSVLFAR--DQWLKPGGAILPDTATM 425 (497)
Q Consensus 377 ~~~~~~-fDvIvs~~~~~~l~~~~~l~~vL~~~--~r~LkpgG~li~~~~~~ 425 (497)
.++.++ ||+|++++. | +......++..+ .++|||||.+++.....
T Consensus 119 ~~~~~~~fD~I~~~~~-~---~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 119 QPQNQPHFDVVFLDPP-F---HFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp SCCSSCCEEEEEECCC-S---SSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred hhccCCCCCEEEECCC-C---CCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 123578 999998764 2 235667788888 77899999998655433
No 48
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.56 E-value=6e-15 Score=138.41 Aligned_cols=118 Identities=23% Similarity=0.253 Sum_probs=93.7
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.+... +.++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.|+++.... .++.
T Consensus 31 ~~~~~l~~~--~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~----------------~~i~ 92 (215)
T 2pxx_A 31 SFRALLEPE--LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV----------------PQLR 92 (215)
T ss_dssp HHHHHHGGG--CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC----------------TTCE
T ss_pred HHHHHHHHh--cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC----------------CCcE
Confidence 345555443 3678899999999999999999998768999999999999999886431 4789
Q ss_pred EEecchhhcccccCCCCCceeEEEecccccccc------------ChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLL------------YESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~------------~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
++.+|+.++ +++.++||+|++..+...+. +...+..++.++.++|||||.+++...
T Consensus 93 ~~~~d~~~~----~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 93 WETMDVRKL----DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp EEECCTTSC----CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEcchhcC----CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 999999886 46778999999875433332 245678999999999999999985443
No 49
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.56 E-value=3e-14 Score=134.18 Aligned_cols=113 Identities=20% Similarity=0.244 Sum_probs=91.8
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
.+..++....+.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++++.+++ .+++++
T Consensus 43 ~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~g~-------------~~~v~~ 108 (204)
T 3njr_A 43 MRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIENIQKNIDTYGL-------------SPRMRA 108 (204)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-------------TTTEEE
T ss_pred HHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCC-------------CCCEEE
Confidence 344455555677899999999999999999999955 999999999999999999999987 238999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+.+|+.+.. ....+||+|++.. .+ .+. ++..+.++|||||.+++...
T Consensus 109 ~~~d~~~~~----~~~~~~D~v~~~~---~~----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 109 VQGTAPAAL----ADLPLPEAVFIGG---GG----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp EESCTTGGG----TTSCCCSEEEECS---CC----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred EeCchhhhc----ccCCCCCEEEECC---cc----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 999998842 1235799999654 22 345 89999999999999985543
No 50
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.56 E-value=8e-15 Score=134.74 Aligned_cols=112 Identities=20% Similarity=0.195 Sum_probs=88.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
..++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.|++++..+++ .++++++++|+.+...
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE-------------PEKFEVRKMDANRALE 108 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-------------GGGEEEEESCHHHHHH
T ss_pred hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC-------------CcceEEEECcHHHHHH
Confidence 357889999999999999999988877999999999999999999988876 2479999999988532
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHH--hccccCCcEEeccCc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFAR--DQWLKPGGAILPDTA 423 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~--~r~LkpgG~li~~~~ 423 (497)
.++...++||+|++++. |. ......++..+ .++|+|||.+++..+
T Consensus 109 ~~~~~~~~fD~i~~~~~-~~---~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 109 QFYEEKLQFDLVLLDPP-YA---KQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp HHHHTTCCEEEEEECCC-GG---GCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHhcCCCCCEEEECCC-CC---chhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 11223678999998764 22 23345566666 899999999985543
No 51
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.56 E-value=9.6e-15 Score=146.10 Aligned_cols=119 Identities=12% Similarity=0.065 Sum_probs=85.1
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch------
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV------ 369 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~------ 369 (497)
.++.+|||||||+|..+..+++.|..+|+|||+|+.|++.|+++....+.... ...-++.+.++++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~--------~~~~~~~f~~~d~~~d~~~ 118 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIK--------TKYYKFDYIQETIRSDTFV 118 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC------------CCCEEEEEECCTTSSSHH
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhcccccc--------ccccccchhhhhcccchhh
Confidence 35789999999999877767777655999999999999999998866543100 0000367878877
Q ss_pred hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 370 ~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
+++.. +++.++||+|+|..+.+.+........+|.++.++|||||.+++.+.+
T Consensus 119 ~~l~~--~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 119 SSVRE--VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHT--TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhc--cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 44321 245689999998653332223335689999999999999999966543
No 52
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.55 E-value=3.7e-14 Score=132.88 Aligned_cols=115 Identities=22% Similarity=0.205 Sum_probs=94.8
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
..+..++....+.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+++++.+++ +++
T Consensus 27 ~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v 92 (204)
T 3e05_A 27 EVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA--------------RNV 92 (204)
T ss_dssp HHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC--------------TTE
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC--------------CcE
Confidence 344556666677889999999999999999999985 46999999999999999999988876 589
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+++.+|+.+.. ....+||+|++... + ..+..++..+.++|||||.+++..
T Consensus 93 ~~~~~d~~~~~----~~~~~~D~i~~~~~---~---~~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 93 TLVEAFAPEGL----DDLPDPDRVFIGGS---G---GMLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp EEEECCTTTTC----TTSCCCSEEEESCC---T---TCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEeCChhhhh----hcCCCCCEEEECCC---C---cCHHHHHHHHHHhcCCCeEEEEEe
Confidence 99999997652 22367999997642 2 267789999999999999998543
No 53
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.55 E-value=3.8e-14 Score=137.44 Aligned_cols=114 Identities=26% Similarity=0.280 Sum_probs=93.3
Q ss_pred HHHHHHh-CCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 285 YRQAILE-NPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 285 y~~~i~~-~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
..+.+.. ...+.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++ ..+. .++.
T Consensus 26 ~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-~~~~--------------~~~~ 89 (263)
T 2yqz_A 26 IATAMASAVHPKGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI-AGVD--------------RKVQ 89 (263)
T ss_dssp HHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT-TTSC--------------TTEE
T ss_pred HHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-hccC--------------CceE
Confidence 3444433 34557789999999999999999999876 9999999999999999887 2222 5899
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
++.+|+.++ +++.++||+|++.. ++.+..++..++.++.++|||||.+++.
T Consensus 90 ~~~~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 90 VVQADARAI----PLPDESVHGVIVVH---LWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCTTSC----CSCTTCEEEEEEES---CGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcccccC----CCCCCCeeEEEECC---chhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 999999876 46788999999765 5555567889999999999999999865
No 54
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.55 E-value=1.2e-14 Score=136.49 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=87.3
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
++.+|||+|||+|.+++.+++.|+.+|+|+|+|+.+++.|++++..+++ .+++++++|+.++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~--------------~~v~~~~~D~~~~~--- 116 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA--------------GNARVVNSNAMSFL--- 116 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC--------------CSEEEECSCHHHHH---
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CcEEEEECCHHHHH---
Confidence 6789999999999999998888877999999999999999999998886 58999999998852
Q ss_pred CCCCCceeEEEeccccccccChhhHHHHHHHHh--ccccCCcEEeccCc
Q 010913 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARD--QWLKPGGAILPDTA 423 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~--r~LkpgG~li~~~~ 423 (497)
+...++||+|++.+. |. ......++..+. ++|+|||++++...
T Consensus 117 ~~~~~~fD~V~~~~p-~~---~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 117 AQKGTPHNIVFVDPP-FR---RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp SSCCCCEEEEEECCS-SS---TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred hhcCCCCCEEEECCC-CC---CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 345678999998764 22 345566777775 46999999986544
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.54 E-value=5.7e-14 Score=140.80 Aligned_cols=116 Identities=20% Similarity=0.192 Sum_probs=98.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
...+.++....+.++.+|||||||+|.++..+++. |+ +|+|+|+|+.+++.|++++...++ .+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~v 142 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDT-------------NRSR 142 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCC-------------SSCE
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-------------CCce
Confidence 45566777777888999999999999999999988 87 999999999999999999988877 2579
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEeccCc
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
.++.+|+.++ + ++||+|++.. ++.+. .++..++.++.++|||||.+++...
T Consensus 143 ~~~~~d~~~~------~-~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 143 QVLLQGWEDF------A-EPVDRIVSIE---AFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EEEESCGGGC------C-CCCSEEEEES---CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEECChHHC------C-CCcCEEEEeC---hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999998764 2 7899999765 34443 6788999999999999999996543
No 56
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.54 E-value=9.2e-15 Score=133.64 Aligned_cols=108 Identities=17% Similarity=0.159 Sum_probs=87.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
..++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.|+++++.+++ .+++.++.+|+.+..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~~~~~~~d~~~~~- 94 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-------------ENRFTLLKMEAERAI- 94 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-------------GGGEEEECSCHHHHH-
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCceEEEECcHHHhH-
Confidence 467889999999999999999998777999999999999999999998887 247999999998842
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHh--ccccCCcEEeccC
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARD--QWLKPGGAILPDT 422 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~--r~LkpgG~li~~~ 422 (497)
+...++||+|++++.. +......++..+. ++|+|||.+++..
T Consensus 95 --~~~~~~fD~i~~~~~~----~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 95 --DCLTGRFDLVFLDPPY----AKETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp --HHBCSCEEEEEECCSS----HHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred --HhhcCCCCEEEECCCC----CcchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 2234679999987531 1234556666666 9999999998544
No 57
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.54 E-value=1.6e-14 Score=138.97 Aligned_cols=106 Identities=18% Similarity=0.192 Sum_probs=87.6
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++...+. .++.++.+++.++.
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~~~~~~~d~~~~~-- 141 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK--------------RVRNYFCCGLQDFT-- 141 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG--------------GEEEEEECCGGGCC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC--------------ceEEEEEcChhhcC--
Confidence 36899999999999999999988766999999999999999998765532 47899999998863
Q ss_pred cCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.++||+|++.. ++.+..+ +..+|.++.++|||||.+++..
T Consensus 142 --~~~~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 142 --PEPDSYDVIWIQW---VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp --CCSSCEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CCCCCEEEEEEcc---hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 5667899999765 4444444 5689999999999999998543
No 58
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.54 E-value=3.9e-14 Score=134.65 Aligned_cols=113 Identities=22% Similarity=0.264 Sum_probs=91.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.|++++...++. .....++.++.+++..+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~---------~~~~~~~~~~~~d~~~~--- 95 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLN---------QKTGGKAEFKVENASSL--- 95 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCC---------SSSSCEEEEEECCTTSC---
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCc---------cccCcceEEEEeccccc---
Confidence 4788999999999999999999977 9999999999999999998776652 12234789999999886
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+++.++||+|++....+.+........++..+.++|||||.+++..
T Consensus 96 -~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 96 -SFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp -CSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 4678899999986644444333444589999999999999998543
No 59
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.54 E-value=1.8e-14 Score=138.10 Aligned_cols=112 Identities=28% Similarity=0.401 Sum_probs=92.2
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
.+.......++.+|||||||+|.++..+++.|..+|+|+|+|+.+++.|+++... .++.++.+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----------------~~~~~~~~ 96 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-----------------TGITYERA 96 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-----------------SSEEEEEC
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-----------------CCceEEEc
Confidence 3444455568899999999999999999999777999999999999998876421 36899999
Q ss_pred chhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 368 d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
|+..+ +++.++||+|++.. ++.+..++..+|..+.++|||||.+++...
T Consensus 97 d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 97 DLDKL----HLPQDSFDLAYSSL---ALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp CGGGC----CCCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Chhhc----cCCCCCceEEEEec---cccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 99886 36678999999754 555556788999999999999999996543
No 60
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.54 E-value=5.1e-14 Score=129.49 Aligned_cols=116 Identities=17% Similarity=0.246 Sum_probs=94.0
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
..+.++......++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..+++.+ .++++
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~------------~~~~~ 106 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADEVK-STTMADINRRAIKLAKENIKLNNLDN------------YDIRV 106 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCTT------------SCEEE
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHcCCCc------------cceEE
Confidence 344455555666889999999999999999999854 99999999999999999998887620 14999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccC-hhhHHHHHHHHhccccCCcEEecc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLY-ESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~-~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+.+|+.+. ++.++||+|++..+ +.+ ...+..++..+.++|+|||.+++.
T Consensus 107 ~~~d~~~~-----~~~~~~D~v~~~~~---~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 107 VHSDLYEN-----VKDRKYNKIITNPP---IRAGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp EECSTTTT-----CTTSCEEEEEECCC---STTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECchhcc-----cccCCceEEEECCC---cccchhHHHHHHHHHHHHcCCCCEEEEE
Confidence 99998874 45678999998652 223 466788999999999999999844
No 61
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.54 E-value=1.4e-14 Score=138.87 Aligned_cols=101 Identities=19% Similarity=0.221 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|+++.. .++.++++++.++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------------------~~v~~~~~d~~~~--- 98 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLK------------------DGITYIHSRFEDA--- 98 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSC------------------SCEEEEESCGGGC---
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhh------------------CCeEEEEccHHHc---
Confidence 4678999999999999999999887 89999999999999988741 2689999999886
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHh-ccccCCcEEeccCc
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARD-QWLKPGGAILPDTA 423 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~-r~LkpgG~li~~~~ 423 (497)
.++++||+|++.. ++.|..++..+|.++. ++|||||.+++...
T Consensus 99 --~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 99 --QLPRRYDNIVLTH---VLEHIDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp --CCSSCEEEEEEES---CGGGCSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred --CcCCcccEEEEhh---HHHhhcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 3578999999755 5666678899999999 99999999996543
No 62
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.53 E-value=3e-14 Score=136.34 Aligned_cols=142 Identities=16% Similarity=0.080 Sum_probs=102.0
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++...+. ..++.++.+|+.++.
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~--- 128 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPK-------------AEYFSFVKEDVFTWR--- 128 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGG-------------GGGEEEECCCTTTCC---
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCC-------------CcceEEEECchhcCC---
Confidence 446999999999999999988776 899999999999999999876543 257999999998863
Q ss_pred CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCceeEEeeecCCCCCCCccccccCccccccchHHH
Q 010913 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATMFVAGFGRGGTSLPFWENVYGFTMSCVGREVV 456 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~fw~~v~g~~~~~~~~~~~ 456 (497)
+..+||+|++..+.+.+ ...++..++..+.++|||||.+++...... .... ...+.+....+...+.
T Consensus 129 --~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~l~ 195 (235)
T 3lcc_A 129 --PTELFDLIFDYVFFCAI-EPEMRPAWAKSMYELLKPDGELITLMYPIT-----DHVG-----GPPYKVDVSTFEEVLV 195 (235)
T ss_dssp --CSSCEEEEEEESSTTTS-CGGGHHHHHHHHHHHEEEEEEEEEEECCCS-----CCCS-----CSSCCCCHHHHHHHHG
T ss_pred --CCCCeeEEEEChhhhcC-CHHHHHHHHHHHHHHCCCCcEEEEEEeccc-----ccCC-----CCCccCCHHHHHHHHH
Confidence 45699999976533222 234888999999999999999985322111 1000 1123355666777776
Q ss_pred hhhcCCCeEeee
Q 010913 457 QDAAGIPIVDVV 468 (497)
Q Consensus 457 ~~~~~~p~v~~v 468 (497)
..+|....+..+
T Consensus 196 ~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 196 PIGFKAVSVEEN 207 (235)
T ss_dssp GGTEEEEEEEEC
T ss_pred HcCCeEEEEEec
Confidence 666654333333
No 63
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=4.2e-14 Score=131.52 Aligned_cols=110 Identities=20% Similarity=0.281 Sum_probs=90.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++..+++ .++++++++|+.++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~ 86 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-------------IDRVTLIKDGHQNM 86 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-------------GGGEEEECSCGGGG
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCCeEEEECCHHHH
Confidence 467899999999999999999987 345999999999999999999999886 25899999999887
Q ss_pred ccccCCCCCceeEEEeccccc-------cccChhhHHHHHHHHhccccCCcEEecc
Q 010913 373 GESMQIQPHSVDVLVSEWMGY-------CLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~-------~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
. .+.+++||+|+++. .+ .+........++..+.++|||||.+++.
T Consensus 87 ~---~~~~~~fD~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 87 D---KYIDCPVKAVMFNL-GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp G---GTCCSCEEEEEEEE-SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred h---hhccCCceEEEEcC-CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 4 24568999999874 22 1222345667999999999999999843
No 64
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.53 E-value=5.3e-14 Score=134.34 Aligned_cols=112 Identities=21% Similarity=0.249 Sum_probs=88.6
Q ss_pred HHHHhCCC-CCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 287 QAILENPS-LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 287 ~~i~~~~~-~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
+.+..... ..++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++... .++.+
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------~~~~~ 96 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN----------------LKVKY 96 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC----------------TTEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC----------------CCEEE
Confidence 44444443 5678999999999999999999982 349999999999999999886433 37999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEeccC
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.+|+.++. ++ ++||+|++.. ++.+..+ ...++.++.++|||||.+++..
T Consensus 97 ~~~d~~~~~----~~-~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 97 IEADYSKYD----FE-EKYDMVVSAL---SIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp EESCTTTCC----CC-SCEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCchhccC----CC-CCceEEEEeC---ccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999998873 44 8999999865 3333333 3469999999999999998543
No 65
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.53 E-value=3.8e-14 Score=132.25 Aligned_cols=103 Identities=28% Similarity=0.370 Sum_probs=88.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++ +|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++...++ ++.++.+|+.++
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~--- 88 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV---------------KITTVQSNLADF--- 88 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC---------------CEEEECCBTTTB---
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC---------------ceEEEEcChhhc---
Confidence 456 999999999999999999987 999999999999999999877654 789999999886
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+++.++||+|++.. ...+..++..++..+.++|||||.+++..
T Consensus 89 -~~~~~~fD~v~~~~---~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 89 -DIVADAWEGIVSIF---CHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp -SCCTTTCSEEEEEC---CCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred -CCCcCCccEEEEEh---hcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 36678999999743 33355778999999999999999998544
No 66
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.53 E-value=1.8e-14 Score=134.96 Aligned_cols=108 Identities=18% Similarity=0.248 Sum_probs=86.7
Q ss_pred CCCCCEEEEEcCCCCHhH-HHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 295 LMKGAVVMDIGCGTGILS-LFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls-~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
..++.+|||+|||+|.++ ..+++.|. +|+|+|+|+.+++.|++++..++ .++.++.+|+.++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---------------~~~~~~~~d~~~~- 83 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENN---------------FKLNISKGDIRKL- 83 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHT---------------CCCCEEECCTTSC-
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcC---------------CceEEEECchhhC-
Confidence 356889999999999984 44555566 99999999999999999987654 3688999999886
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+++.++||+|++....+.+ ...++..++.++.++|||||.+++...
T Consensus 84 ---~~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 84 ---PFKDESMSFVYSYGTIFHM-RKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp ---CSCTTCEEEEEECSCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCCceeEEEEcChHHhC-CHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 4678899999976533222 237788999999999999999996543
No 67
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.53 E-value=4.7e-14 Score=139.36 Aligned_cols=117 Identities=21% Similarity=0.308 Sum_probs=95.3
Q ss_pred HHHHHHhC-CCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 010913 285 YRQAILEN-PSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 285 y~~~i~~~-~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~ 361 (497)
+...+... ..+.++.+|||||||+|.++..+++. + ..+|+|+|+|+.+++.|++++...+. +
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---------------~ 73 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY---------------D 73 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS---------------E
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC---------------c
Confidence 33444433 35678899999999999999999987 3 25999999999999999999876653 8
Q ss_pred eEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
++++++|+.++. + +++||+|++.. ++.+..++..++.++.++|||||.+++..+.
T Consensus 74 v~~~~~d~~~~~----~-~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 74 SEFLEGDATEIE----L-NDKYDIAICHA---FLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCTTTCC----C-SSCEEEEEEES---CGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEEcchhhcC----c-CCCeeEEEECC---hhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999999999863 4 56999999765 4556677889999999999999999965544
No 68
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.53 E-value=4.9e-14 Score=137.43 Aligned_cols=113 Identities=18% Similarity=0.307 Sum_probs=91.9
Q ss_pred CCCC-CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 293 PSLM-KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 293 ~~~~-~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
.... ++.+|||+|||+|.+++.+++.+..+|+|+|+++.+++.|++++..+++ .++++++++|+.+
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~-------------~~~v~~~~~D~~~ 110 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL-------------EDQIEIIEYDLKK 110 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC-------------TTTEEEECSCGGG
T ss_pred hcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC-------------cccEEEEECcHHH
Confidence 3456 7899999999999999999999666999999999999999999999988 3579999999998
Q ss_pred cccccCCCCCceeEEEeccccccc-----cC------------hhhHHHHHHHHhccccCCcEEec
Q 010913 372 LGESMQIQPHSVDVLVSEWMGYCL-----LY------------ESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~~~~l-----~~------------~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+.. .++.++||+|++++..+.. .. ...+..++..+.++|||||.+++
T Consensus 111 ~~~--~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 111 ITD--LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp GGG--TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhh--hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 742 2457899999998642221 00 13456799999999999999985
No 69
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.52 E-value=7.3e-14 Score=133.76 Aligned_cols=116 Identities=26% Similarity=0.351 Sum_probs=93.6
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
..+.+.+.... .++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|++++..++ .++
T Consensus 21 ~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~---------------~~~ 81 (243)
T 3d2l_A 21 PEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN---------------RHV 81 (243)
T ss_dssp HHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT---------------CCC
T ss_pred HHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC---------------Cce
Confidence 34555565543 45789999999999999999987 499999999999999999987765 378
Q ss_pred EEEecchhhcccccCCCCCceeEEEecc-ccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~-~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.++.+|+.++. ++ ++||+|++.. ....+.....+..++..+.++|||||.++++.
T Consensus 82 ~~~~~d~~~~~----~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 82 DFWVQDMRELE----LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp EEEECCGGGCC----CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcChhhcC----CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 99999998863 43 7899999753 33334455778899999999999999999654
No 70
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.52 E-value=2.6e-14 Score=142.15 Aligned_cols=122 Identities=18% Similarity=0.171 Sum_probs=93.2
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
....++.... .++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++...++.. ..++++
T Consensus 71 ~~~~~~~~~~-~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~-----------~~~v~~ 137 (299)
T 3g2m_A 71 EAREFATRTG-PVSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADV-----------RDRCTL 137 (299)
T ss_dssp HHHHHHHHHC-CCCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHH-----------HTTEEE
T ss_pred HHHHHHHhhC-CCCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhccccc-----------ccceEE
Confidence 3344444333 3345999999999999999999986 89999999999999999987765200 037999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
+++|+.++. + +++||+|++...........++..+|.++.++|||||.|++...+
T Consensus 138 ~~~d~~~~~----~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 138 VQGDMSAFA----L-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp EECBTTBCC----C-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCchhcCC----c-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 999999873 4 689999986433233334456789999999999999999965543
No 71
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.52 E-value=5.3e-14 Score=132.29 Aligned_cols=137 Identities=23% Similarity=0.227 Sum_probs=99.6
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++ ++.++.+++..+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~--------------------~~~~~~~d~~~~-- 97 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL--------------------GRPVRTMLFHQL-- 97 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH--------------------TSCCEECCGGGC--
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc--------------------CCceEEeeeccC--
Confidence 35788999999999999999999987 9999999999999999886 346778888876
Q ss_pred ccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEeccCceeEEeeecCCCCCCCccccccCccccccc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILPDTATMFVAGFGRGGTSLPFWENVYGFTMSCVG 452 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~fw~~v~g~~~~~~~ 452 (497)
+ +.++||+|++.. ++.+. .++..+|.++.++|||||.+++..... .......+......+....+.
T Consensus 98 --~-~~~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 165 (211)
T 3e23_A 98 --D-AIDAYDAVWAHA---CLLHVPRDELADVLKLIWRALKPGGLFYASYKSG------EGEGRDKLARYYNYPSEEWLR 165 (211)
T ss_dssp --C-CCSCEEEEEECS---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC------SSCEECTTSCEECCCCHHHHH
T ss_pred --C-CCCcEEEEEecC---chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC------CcccccccchhccCCCHHHHH
Confidence 3 678999999865 33333 478899999999999999998643211 111111111222235666777
Q ss_pred hHHHhhh-cCCCeEe
Q 010913 453 REVVQDA-AGIPIVD 466 (497)
Q Consensus 453 ~~~~~~~-~~~p~v~ 466 (497)
..+...+ |....+.
T Consensus 166 ~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 166 ARYAEAGTWASVAVE 180 (211)
T ss_dssp HHHHHHCCCSEEEEE
T ss_pred HHHHhCCCcEEEEEE
Confidence 7777776 6544333
No 72
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.52 E-value=4.4e-14 Score=139.36 Aligned_cols=103 Identities=20% Similarity=0.295 Sum_probs=89.3
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.|++++..+++ +++++.+|+.++.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~-- 180 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL---------------NISTALYDINAAN-- 180 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC---------------CEEEEECCGGGCC--
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC---------------ceEEEEecccccc--
Confidence 3788999999999999999999988 999999999999999999988875 7999999998863
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+ .++||+|++..+.+.+ .......++..+.++|||||.+++
T Consensus 181 --~-~~~fD~i~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 181 --I-QENYDFIVSTVVFMFL-NRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp --C-CSCEEEEEECSSGGGS-CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred --c-cCCccEEEEccchhhC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3 7899999987644332 446678999999999999999773
No 73
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.52 E-value=3.8e-14 Score=129.15 Aligned_cols=115 Identities=18% Similarity=0.190 Sum_probs=90.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
.++..++......++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++..+++ ..++
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~~ 78 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV-------------SDRI 78 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC-------------TTSE
T ss_pred HHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC-------------CCCE
Confidence 34455555556678899999999999999999988 445999999999999999999998887 2378
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.+++.+. ++...++||+|++.. .+.+ ..++..+.++|||||.+++..
T Consensus 79 -~~~~d~~~~---~~~~~~~~D~i~~~~---~~~~----~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 79 -AVQQGAPRA---FDDVPDNPDVIFIGG---GLTA----PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp -EEECCTTGG---GGGCCSCCSEEEECC----TTC----TTHHHHHHHTCCTTCEEEEEE
T ss_pred -EEecchHhh---hhccCCCCCEEEECC---cccH----HHHHHHHHHhcCCCCEEEEEe
Confidence 888887543 123337899999754 3333 568889999999999998543
No 74
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.52 E-value=6.3e-14 Score=139.36 Aligned_cols=114 Identities=18% Similarity=0.249 Sum_probs=92.0
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHH--cCCCEEEEEeCCHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCc
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQ--AGASRVIAVEASEKMAAVATQIAKDN-DFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~--~G~~~V~gvD~S~~~i~~A~~~~~~~-gl~~~~~~~~~~~~~~~~ 361 (497)
+.+.|.... ..++.+|||||||+|.++..+++ .+..+|+|+|+|+.+++.|++++... +. ..+
T Consensus 25 ~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------------~~~ 90 (299)
T 3g5t_A 25 FYKMIDEYH-DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-------------YKN 90 (299)
T ss_dssp HHHHHHHHC-CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-------------CTT
T ss_pred HHHHHHHHh-cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-------------CCc
Confidence 334444432 25789999999999999999996 34569999999999999999998876 32 258
Q ss_pred eEEEecchhhcccccCCCC------CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 362 MEVVQGMVEELGESMQIQP------HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~------~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++++++|++++. ++. ++||+|++.. ++.+. ++..++..+.++|||||.|++
T Consensus 91 v~~~~~d~~~~~----~~~~~~~~~~~fD~V~~~~---~l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 91 VSFKISSSDDFK----FLGADSVDKQKIDMITAVE---CAHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEECCTTCCG----GGCTTTTTSSCEEEEEEES---CGGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEcCHHhCC----ccccccccCCCeeEEeHhh---HHHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 999999999874 444 7999999765 44444 889999999999999999986
No 75
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.52 E-value=2e-14 Score=137.75 Aligned_cols=111 Identities=18% Similarity=0.243 Sum_probs=91.7
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
+.+.+.... .++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|+++. . ..++.+
T Consensus 43 ~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~--~---------------~~~~~~ 102 (242)
T 3l8d_A 43 IIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG--E---------------GPDLSF 102 (242)
T ss_dssp HHHHHHHHS--CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT--C---------------BTTEEE
T ss_pred HHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc--c---------------cCCceE
Confidence 344444433 4788999999999999999999987 9999999999999888763 1 257999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.+|+.++ +++.++||+|++.. ++.+..++..++.++.++|+|||.+++..
T Consensus 103 ~~~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 103 IKGDLSSL----PFENEQFEAIMAIN---SLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EECBTTBC----SSCTTCEEEEEEES---CTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhcC----CCCCCCccEEEEcC---hHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 99999986 47789999999754 56666788899999999999999998554
No 76
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.51 E-value=3.1e-14 Score=142.19 Aligned_cols=122 Identities=21% Similarity=0.285 Sum_probs=95.8
Q ss_pred hhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHH--HcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 010913 281 RTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAA--QAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINN 358 (497)
Q Consensus 281 r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la--~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~ 358 (497)
|...++..+.. .+.++.+|||||||+|.++..++ ..+..+|+|+|+|+.+++.|++++...++
T Consensus 104 ~~~~~~~~l~~--~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~------------- 168 (305)
T 3ocj_A 104 RHGHFRRALQR--HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL------------- 168 (305)
T ss_dssp HHHHHHHHHHH--HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT-------------
T ss_pred HHHHHHHHHHh--hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC-------------
Confidence 33345555533 34678999999999999999985 33445999999999999999999988877
Q ss_pred CCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 359 AGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 359 ~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.++++++++|+.++ +++ ++||+|++..+.+.+........++.++.++|||||.+++..
T Consensus 169 ~~~v~~~~~d~~~~----~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 169 AGQITLHRQDAWKL----DTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp GGGEEEEECCGGGC----CCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCceEEEECchhcC----Ccc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 24799999999987 355 899999987644444444445568999999999999999644
No 77
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.51 E-value=5.7e-14 Score=131.93 Aligned_cols=97 Identities=28% Similarity=0.357 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
++.+|||||||+|.++..+ |..+|+|+|+|+.+++.|+++. .++.++.+++.++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~---- 89 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-------------------PEATWVRAWGEAL---- 89 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-------------------TTSEEECCCTTSC----
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-------------------CCcEEEEcccccC----
Confidence 8899999999999998877 5558999999999999998874 2678999999876
Q ss_pred CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+++.++||+|++.. ++.+..++..++.++.++|||||.+++..
T Consensus 90 ~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 90 PFPGESFDVVLLFT---TLEFVEDVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp CSCSSCEEEEEEES---CTTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCcEEEEEEcC---hhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 46788999999654 66666788999999999999999998654
No 78
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.51 E-value=9.3e-14 Score=137.47 Aligned_cols=104 Identities=18% Similarity=0.239 Sum_probs=87.0
Q ss_pred CCCCCCCCEEEEEcCCCCHhH-HHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 292 NPSLMKGAVVMDIGCGTGILS-LFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 292 ~~~~~~~~~VLDvGCGtG~ls-~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
...+.+|.+|||||||+|.++ +.+|+. |+ +|+|||+|+.|++.|+++++..|+ ++++++++|+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl--------------~~v~~v~gDa 181 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGV--------------DGVNVITGDE 181 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTC--------------CSEEEEESCG
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCC--------------CCeEEEECch
Confidence 356789999999999998765 556665 65 999999999999999999988876 5899999999
Q ss_pred hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 370 ~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.++ +.++||+|++... ..+...++.++.++|||||+|+...
T Consensus 182 ~~l------~d~~FDvV~~~a~------~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 182 TVI------DGLEFDVLMVAAL------AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp GGG------GGCCCSEEEECTT------CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred hhC------CCCCcCEEEECCC------ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 885 2578999996432 2567889999999999999999543
No 79
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.50 E-value=5.5e-14 Score=132.19 Aligned_cols=102 Identities=18% Similarity=0.159 Sum_probs=85.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++ .+. .++.++.+|+.++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~--------------~~~~~~~~d~~~~-- 102 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGL--------------DNVEFRQQDLFDW-- 102 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCC--------------TTEEEEECCTTSC--
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCC--------------CCeEEEecccccC--
Confidence 56778999999999999999999977 99999999999998887 333 4799999999875
Q ss_pred ccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEeccCc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
++.++||+|++.. ++.+... ...+|.++.++|||||.+++...
T Consensus 103 ---~~~~~~D~v~~~~---~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 103 ---TPDRQWDAVFFAH---WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp ---CCSSCEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCceeEEEEec---hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 4678999999765 4444334 58899999999999999986543
No 80
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.50 E-value=1e-13 Score=132.16 Aligned_cols=108 Identities=24% Similarity=0.283 Sum_probs=87.3
Q ss_pred CCCCCEEEEEcCC-CCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 295 LMKGAVVMDIGCG-TGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 295 ~~~~~~VLDvGCG-tG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
+.++.+|||+||| +|.++..+++.+..+|+|+|+|+.+++.|++++..+++ +++++++|+..+.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---------------~v~~~~~d~~~~~ 117 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS---------------NVRLVKSNGGIIK 117 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC---------------CCEEEECSSCSST
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC---------------CcEEEeCCchhhh
Confidence 4688999999999 99999999998334999999999999999999998875 7899999976543
Q ss_pred cccCCCCCceeEEEeccccccc----------------cChhhHHHHHHHHhccccCCcEEec
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCL----------------LYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l----------------~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+++.++||+|++++..+.. .....+..++..+.++|||||.+++
T Consensus 118 ---~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 118 ---GVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp ---TTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ---hcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 3556899999988532211 1112247899999999999999984
No 81
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.50 E-value=2.3e-14 Score=139.09 Aligned_cols=126 Identities=18% Similarity=0.196 Sum_probs=89.3
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCC--------CCCCCCCCC-------C
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWD--------RPQSEGNIN-------N 358 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~--------~~~~~~~~~-------~ 358 (497)
...++.+|||||||+|.++..+++.|..+|+|+|+|+.+++.|++++..++.... ....+.... .
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4567899999999999999999988777899999999999999988754421000 000000000 0
Q ss_pred CCce-EEEecchhhcccccCCCC---CceeEEEeccccccc-cChhhHHHHHHHHhccccCCcEEeccC
Q 010913 359 AGKM-EVVQGMVEELGESMQIQP---HSVDVLVSEWMGYCL-LYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 359 ~~~i-~~i~gd~~~l~~~l~~~~---~~fDvIvs~~~~~~l-~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
..++ .++.+|+.+.. ++++ ++||+|++....+.+ .+..++..++.++.++|||||.+++..
T Consensus 133 ~~~v~~~~~~d~~~~~---~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQ---PLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHHEEEEEECCTTSSS---TTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhheeEEEeeeccCC---CCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 0127 89999998764 2344 899999976522211 156688999999999999999998543
No 82
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=7.9e-14 Score=135.74 Aligned_cols=101 Identities=20% Similarity=0.258 Sum_probs=85.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++ .++.++.+|+.++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~~-- 106 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRN-------------------PDAVLHHGDMRDFS-- 106 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHC-------------------TTSEEEECCTTTCC--
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhC-------------------CCCEEEECChHHCC--
Confidence 4678999999999999999999987 8999999999999998873 36899999998863
Q ss_pred cCCCCCceeEEEecc-ccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 376 MQIQPHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 376 l~~~~~~fDvIvs~~-~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+ +++||+|++.. ....+....++..+|..+.++|||||.++++
T Consensus 107 --~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 --L-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp --C-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred --c-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4 78999999864 4333444467889999999999999999976
No 83
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.50 E-value=1.3e-13 Score=130.51 Aligned_cols=107 Identities=15% Similarity=0.126 Sum_probs=81.7
Q ss_pred CCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 293 PSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
..+.+|.+|||+|||+|.++..+++. |..+|+|+|+|+.|++.+.+.++.. .++.++.+|+..
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~----------------~~v~~~~~d~~~ 116 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER----------------NNIIPLLFDASK 116 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC----------------SSEEEECSCTTC
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC----------------CCeEEEEcCCCC
Confidence 34568899999999999999999987 4459999999999887776665543 368888998876
Q ss_pred cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.....+++ ++||+|++.. ........++.++.++|||||.+++.
T Consensus 117 ~~~~~~~~-~~fD~V~~~~-----~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 117 PWKYSGIV-EKVDLIYQDI-----AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp GGGTTTTC-CCEEEEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcccc-cceeEEEEec-----cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 42111333 7899999862 22334556689999999999999854
No 84
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=8.8e-14 Score=134.62 Aligned_cols=108 Identities=16% Similarity=0.237 Sum_probs=90.6
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
.++......++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+++. .++.++.
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-------------------~~~~~~~ 84 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-------------------PNTNFGK 84 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-------------------TTSEEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-------------------CCcEEEE
Confidence 4566666778899999999999999999988 2348999999999999998771 4789999
Q ss_pred cchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 367 gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+|+.++ + +.++||+|++.. ++.+..++..+|.++.++|||||.+++..
T Consensus 85 ~d~~~~----~-~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 85 ADLATW----K-PAQKADLLYANA---VFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp CCTTTC----C-CSSCEEEEEEES---CGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CChhhc----C-ccCCcCEEEEeC---chhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 999886 3 577899999765 55555788999999999999999998654
No 85
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.49 E-value=3.3e-14 Score=134.34 Aligned_cols=100 Identities=23% Similarity=0.298 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|++++. .++.++.+|+.++.
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~------------------~~~~~~~~d~~~~~-- 102 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP------------------KEFSITEGDFLSFE-- 102 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC------------------TTCCEESCCSSSCC--
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC------------------CceEEEeCChhhcC--
Confidence 4788999999999999999999977 99999999999999988752 26899999998873
Q ss_pred cCCCCCceeEEEeccccccccChhhHHH--HHHHHhccccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSS--VLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~--vL~~~~r~LkpgG~li~~~ 422 (497)
++ ++||+|++.. ++.+..+... +|.++.++|||||.+++..
T Consensus 103 --~~-~~fD~v~~~~---~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 103 --VP-TSIDTIVSTY---AFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp --CC-SCCSEEEEES---CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred --CC-CCeEEEEECc---chhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 55 8999999765 4555555555 9999999999999999653
No 86
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.49 E-value=3.8e-14 Score=140.83 Aligned_cols=127 Identities=20% Similarity=0.236 Sum_probs=88.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCC------------------------
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRP------------------------ 350 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~------------------------ 350 (497)
.++++|||||||+|.++..+++. +..+|+|||+|+.+++.|++++...+......
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 57899999999999999999998 55699999999999999998876544210000
Q ss_pred --------------------CCCCCCCCCCceEEEecchhhccc-ccCCCCCceeEEEecccccccc---ChhhHHHHHH
Q 010913 351 --------------------QSEGNINNAGKMEVVQGMVEELGE-SMQIQPHSVDVLVSEWMGYCLL---YESMLSSVLF 406 (497)
Q Consensus 351 --------------------~~~~~~~~~~~i~~i~gd~~~l~~-~l~~~~~~fDvIvs~~~~~~l~---~~~~l~~vL~ 406 (497)
........+.+|+++++|+..... .+++..++||+|+|..+...++ ....+..++.
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 000011123589999999875321 1134678999999865432222 3447889999
Q ss_pred HHhccccCCcEEeccC
Q 010913 407 ARDQWLKPGGAILPDT 422 (497)
Q Consensus 407 ~~~r~LkpgG~li~~~ 422 (497)
.+.++|||||+|++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999999643
No 87
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.49 E-value=7.3e-14 Score=133.05 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=86.4
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
++.+|||||||+|.++..+|+.+ ...|+|||+|+.+++.|++++..+++ .++.++++|+.++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l--------------~nv~~~~~Da~~~l~- 98 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL--------------SNLRVMCHDAVEVLH- 98 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC--------------SSEEEECSCHHHHHH-
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC--------------CcEEEEECCHHHHHH-
Confidence 56799999999999999999873 45899999999999999999998887 579999999988520
Q ss_pred cCCCCCceeEEEeccccccccChhh------HHHHHHHHhccccCCcEEeccCc
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESM------LSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~------l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..+++++||.|++..... ...... ...++..+.++|||||.+++.+.
T Consensus 99 ~~~~~~~~d~v~~~~~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 99 KMIPDNSLRMVQLFFPDP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HHSCTTCEEEEEEESCCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHcCCCChheEEEeCCCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 015788999999652111 111111 13589999999999999986543
No 88
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.49 E-value=9.3e-14 Score=133.84 Aligned_cols=100 Identities=17% Similarity=0.207 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||||||+|.+++.+++. +..+|+|||+|+.+++.|+++++.+++ .+++++++++.++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v~~~~~d~~~~~- 133 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL--------------ENTTFCHDRAETFG- 133 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC--------------SSEEEEESCHHHHT-
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCEEEEeccHHHhc-
Confidence 47889999999999999999965 345999999999999999999988887 46999999998873
Q ss_pred ccCCC---CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 375 SMQIQ---PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 375 ~l~~~---~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++ .++||+|++..+ ..+..++..+.++|||||.+++
T Consensus 134 ---~~~~~~~~fD~V~~~~~-------~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 134 ---QRKDVRESYDIVTARAV-------ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp ---TCTTTTTCEEEEEEECC-------SCHHHHHHHHGGGEEEEEEEEE
T ss_pred ---ccccccCCccEEEEecc-------CCHHHHHHHHHHhcCCCCEEEE
Confidence 32 578999997541 4578899999999999999984
No 89
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.48 E-value=9.4e-14 Score=137.17 Aligned_cols=103 Identities=18% Similarity=0.136 Sum_probs=87.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.+|.+|||+|||+|.+++.+++.|+.+|+|+|+|+.+++.|+++++.+++. ++++++++|+.++.
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~-------------~~v~~~~~D~~~~~-- 188 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE-------------DRMSAYNMDNRDFP-- 188 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT-------------TTEEEECSCTTTCC--
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------ceEEEEECCHHHhc--
Confidence 568999999999999999999998768999999999999999999999982 46999999999873
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..++||+|+++++. ....++..+.++|||||.+++.++
T Consensus 189 ---~~~~fD~Vi~~~p~-------~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 189 ---GENIADRILMGYVV-------RTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp ---CCSCEEEEEECCCS-------SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ---ccCCccEEEECCch-------hHHHHHHHHHHHCCCCeEEEEEEe
Confidence 37789999976531 224577888999999999985444
No 90
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.48 E-value=1.6e-13 Score=134.01 Aligned_cols=113 Identities=15% Similarity=0.151 Sum_probs=83.7
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 286 ~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
.+.++....+.++.+|||||||+|.++..+++.|+ +|+|||+|+.|++.|++++..+ ++
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~--------------------~v 92 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR--------------------CV 92 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS--------------------CC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc--------------------cc
Confidence 34566677788899999999999999999999987 9999999999999999886432 12
Q ss_pred ecchhhccccc-CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 366 QGMVEELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 366 ~gd~~~l~~~l-~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.+++.++.... ....++||+|++..+.+.+ ....+..++..+.++| |||+++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~-~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 93 TIDLLDITAEIPKELAGHFDFVLNDRLINRF-TTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp EEEECCTTSCCCGGGTTCCSEEEEESCGGGS-CHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred eeeeeecccccccccCCCccEEEEhhhhHhC-CHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 23333332000 0125689999987533222 3456788999999999 99999854
No 91
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.48 E-value=2.2e-13 Score=127.87 Aligned_cols=111 Identities=18% Similarity=0.111 Sum_probs=89.1
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
....++......++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++..+++ .++++
T Consensus 65 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--------------~~v~~ 129 (210)
T 3lbf_A 65 MVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ-HVCSVERIKGLQWQARRRLKNLDL--------------HNVST 129 (210)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHHHHHHHTTC--------------CSEEE
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEecCHHHHHHHHHHHHHcCC--------------CceEE
Confidence 344455556678899999999999999999999965 999999999999999999998886 47999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+.+|+.+.. .+.++||+|++... +.+.. ..+.++|||||++++...
T Consensus 130 ~~~d~~~~~----~~~~~~D~i~~~~~---~~~~~------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 130 RHGDGWQGW----QARAPFDAIIVTAA---PPEIP------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp EESCGGGCC----GGGCCEEEEEESSB---CSSCC------THHHHTEEEEEEEEEEEC
T ss_pred EECCcccCC----ccCCCccEEEEccc---hhhhh------HHHHHhcccCcEEEEEEc
Confidence 999998753 34678999998652 22222 246789999999996544
No 92
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=3.7e-14 Score=138.28 Aligned_cols=108 Identities=31% Similarity=0.341 Sum_probs=89.1
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.+.......++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|+++ .++.
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------------------~~~~ 79 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVH--------------------PQVE 79 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCC--------------------TTEE
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhc--------------------cCCE
Confidence 3455566655667889999999999999999999776 999999999998766543 2789
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++.+|++++ +++.++||+|++.. ++.+..++..++.++.++|| ||.+++
T Consensus 80 ~~~~d~~~~----~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~Lk-gG~~~~ 128 (261)
T 3ege_A 80 WFTGYAENL----ALPDKSVDGVISIL---AIHHFSHLEKSFQEMQRIIR-DGTIVL 128 (261)
T ss_dssp EECCCTTSC----CSCTTCBSEEEEES---CGGGCSSHHHHHHHHHHHBC-SSCEEE
T ss_pred EEECchhhC----CCCCCCEeEEEEcc---hHhhccCHHHHHHHHHHHhC-CcEEEE
Confidence 999999886 47789999999765 45555788999999999999 997663
No 93
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.47 E-value=4e-13 Score=128.89 Aligned_cols=114 Identities=17% Similarity=0.234 Sum_probs=91.1
Q ss_pred HHHHHHh---CCCCCCCCEEEEEcCCCCHhHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 010913 285 YRQAILE---NPSLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (497)
Q Consensus 285 y~~~i~~---~~~~~~~~~VLDvGCGtG~ls~~la~~-G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~ 359 (497)
...+|+. .+.+.||.+|||+|||+|.++..+|+. |. ++|+|+|+|+.|++.|++++...
T Consensus 62 laa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---------------- 125 (233)
T 4df3_A 62 LAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---------------- 125 (233)
T ss_dssp HHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC----------------
T ss_pred HHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh----------------
Confidence 3444543 456889999999999999999999998 54 69999999999999998876543
Q ss_pred CceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 360 GKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 360 ~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.++..+.++...... .+....++|+|++.. .+..+...++.++.++|||||.+++
T Consensus 126 ~ni~~V~~d~~~p~~-~~~~~~~vDvVf~d~-----~~~~~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 126 RNIFPILGDARFPEK-YRHLVEGVDGLYADV-----AQPEQAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp TTEEEEESCTTCGGG-GTTTCCCEEEEEECC-----CCTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCeeEEEEeccCccc-cccccceEEEEEEec-----cCChhHHHHHHHHHHhccCCCEEEE
Confidence 478889888876542 245678999999643 3445677899999999999999884
No 94
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.47 E-value=1.1e-13 Score=142.03 Aligned_cols=116 Identities=17% Similarity=0.205 Sum_probs=91.4
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHH-------HhCCCCCCCCCCCCCCC
Q 010913 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIA-------KDNDFWWDRPQSEGNIN 357 (497)
Q Consensus 286 ~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~-------~~~gl~~~~~~~~~~~~ 357 (497)
...++..+.+.++.+|||||||+|.+++.+|+. |+.+|+|||+|+.+++.|++++ +.+|+.
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~----------- 230 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK----------- 230 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-----------
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-----------
Confidence 344555567789999999999999999999865 7777999999999999998754 334441
Q ss_pred CCCceEEEecchhhcccccCCCC--CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 358 NAGKMEVVQGMVEELGESMQIQP--HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 358 ~~~~i~~i~gd~~~l~~~l~~~~--~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
..+|++++||+.++. +.. ..||+|+++.+ + +.+++...|.++.+.|||||+|+..
T Consensus 231 -~~rVefi~GD~~~lp----~~d~~~~aDVVf~Nn~---~-F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 231 -HAEYTLERGDFLSEE----WRERIANTSVIFVNNF---A-FGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp -CCEEEEEECCTTSHH----HHHHHHTCSEEEECCT---T-CCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred -CCCeEEEECcccCCc----cccccCCccEEEEccc---c-cCchHHHHHHHHHHcCCCCcEEEEe
Confidence 158999999998864 322 47999998652 2 3467888899999999999999943
No 95
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.47 E-value=3.3e-14 Score=146.76 Aligned_cols=113 Identities=22% Similarity=0.369 Sum_probs=91.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhC-----C-CCCCCCCCCCCCCCCCceEEEe
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDN-----D-FWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~-----g-l~~~~~~~~~~~~~~~~i~~i~ 366 (497)
+.++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|++++..+ | +. ..++.+++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~------------~~~v~~~~ 148 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPS------------RSNVRFLK 148 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTT------------CCCEEEEE
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccC------------CCceEEEE
Confidence 457899999999999999999986 2349999999999999999987654 3 21 25899999
Q ss_pred cchhhcccc--cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 367 GMVEELGES--MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 367 gd~~~l~~~--l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+|+.++... .+++.++||+|++.. ++.+..++..+|.++.++|||||.|++..
T Consensus 149 ~d~~~l~~~~~~~~~~~~fD~V~~~~---~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 149 GFIENLATAEPEGVPDSSVDIVISNC---VCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp SCTTCGGGCBSCCCCTTCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccHHHhhhcccCCCCCCCEEEEEEcc---chhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999886210 146788999999876 44555678999999999999999998543
No 96
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.47 E-value=4.5e-14 Score=133.37 Aligned_cols=110 Identities=26% Similarity=0.354 Sum_probs=85.5
Q ss_pred HHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
++......++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|+++ .++.++.++
T Consensus 44 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~--------------------~~~~~~~~~ 102 (227)
T 3e8s_A 44 ILLAILGRQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA--------------------GAGEVHLAS 102 (227)
T ss_dssp HHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT--------------------CSSCEEECC
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh--------------------cccccchhh
Confidence 33333335679999999999999999999987 999999999999988876 256788888
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+.++......+..+||+|++.. ++. ..++..++..+.++|||||.+++...
T Consensus 103 ~~~~~~~~~~~~~~fD~v~~~~---~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 103 YAQLAEAKVPVGKDYDLICANF---ALL-HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp HHHHHTTCSCCCCCEEEEEEES---CCC-SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHhhcccccccCCCccEEEECc---hhh-hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 8877321122345699999765 444 56778999999999999999996544
No 97
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=7.3e-14 Score=137.39 Aligned_cols=100 Identities=24% Similarity=0.367 Sum_probs=85.1
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
...++.+|||||||+|.++..+++.|. +|+|+|+|+.|++.|+++. .++.++.+|+..+.
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~~ 113 (279)
T 3ccf_A 54 NPQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-------------------PHLHFDVADARNFR 113 (279)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-------------------TTSCEEECCTTTCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-------------------CCCEEEECChhhCC
Confidence 456789999999999999999999765 9999999999999998763 36789999998863
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+ +++||+|++.. ++.+..++..+|.++.++|||||.+++.
T Consensus 114 ----~-~~~fD~v~~~~---~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 114 ----V-DKPLDAVFSNA---MLHWVKEPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ----C-SSCEEEEEEES---CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----c-CCCcCEEEEcc---hhhhCcCHHHHHHHHHHhcCCCcEEEEE
Confidence 4 57999999765 5555567889999999999999999854
No 98
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.47 E-value=2.7e-13 Score=129.48 Aligned_cols=112 Identities=18% Similarity=0.255 Sum_probs=89.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.+.... .++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++. .++.
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~-------------------~~~~ 86 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL-------------------PDAT 86 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC-------------------TTCE
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC-------------------CCCE
Confidence 3444444433 5778999999999999999999876 9999999999999998763 3689
Q ss_pred EEecchhhcccccCCCCCceeEEEecc-ccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEW-MGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~-~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.+|+.++. + .++||+|+|.. ....+....++..+|..+.++|||||.+++..
T Consensus 87 ~~~~d~~~~~----~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 87 LHQGDMRDFR----L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EEECCTTTCC----C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEECCHHHcc----c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9999998863 4 67899999632 33333344678899999999999999999764
No 99
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.47 E-value=6.7e-14 Score=126.48 Aligned_cols=106 Identities=17% Similarity=0.113 Sum_probs=81.8
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
++.+|||+|||+|.++..+++.|. .|+|+|+|+.+++.|++++..+++ +++++++|+.+.....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~~~~ 104 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL---------------GARVVALPVEVFLPEA 104 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC---------------CCEEECSCHHHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC---------------ceEEEeccHHHHHHhh
Confidence 678999999999999999999987 599999999999999999987764 6899999998742111
Q ss_pred CCCCCceeEEEeccccccccChhhHHHHHHHHh--ccccCCcEEeccCc
Q 010913 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARD--QWLKPGGAILPDTA 423 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~--r~LkpgG~li~~~~ 423 (497)
+...++||+|++.+... .....++..+. ++|||||.+++...
T Consensus 105 ~~~~~~~D~i~~~~~~~-----~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 105 KAQGERFTVAFMAPPYA-----MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp HHTTCCEEEEEECCCTT-----SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred hccCCceEEEEECCCCc-----hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 11234899999875322 23344555555 99999999985433
No 100
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.46 E-value=1.7e-13 Score=130.24 Aligned_cols=112 Identities=16% Similarity=0.232 Sum_probs=85.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..++.++++ + ..+|+|||+++.+++.|+++++.+++. ++|+++.+|+.+..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------~~v~~~~~d~~~~l 123 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ-------------DKVTILNGASQDLI 123 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-------------GGEEEEESCHHHHG
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC-------------CceEEEECCHHHHH
Confidence 46789999999999999999985 2 459999999999999999999988872 47999999987742
Q ss_pred cccC--CCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 374 ESMQ--IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 374 ~~l~--~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
..++ +..++||+|++.. ...+......++..+ ++|||||+|+++...
T Consensus 124 ~~~~~~~~~~~fD~V~~d~---~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 124 PQLKKKYDVDTLDMVFLDH---WKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp GGTTTTSCCCCCSEEEECS---CGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHHHhcCCCceEEEEEcC---CcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 1111 1126899999754 222233344567777 999999999976554
No 101
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.46 E-value=2.3e-13 Score=128.57 Aligned_cols=110 Identities=13% Similarity=0.125 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||||||+|.++..+++. +..+|+|||+|+.+++.|++++..+++ .++.++++|+.++..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~--------------~~v~~~~~d~~~~~~ 105 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV--------------PNIKLLWVDGSDLTD 105 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--------------SSEEEEECCSSCGGG
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC--------------CCEEEEeCCHHHHHh
Confidence 35789999999999999999988 345999999999999999999988876 589999999987631
Q ss_pred ccCCCCCceeEEEecccccccc--Chh---hHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLL--YES---MLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~--~~~---~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.++.++||+|++........ +.. ....++..+.++|+|||.+++.
T Consensus 106 --~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 106 --YFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp --TSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred --hcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 15678899999764211000 000 2357899999999999999854
No 102
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=3.7e-13 Score=122.64 Aligned_cols=109 Identities=18% Similarity=0.268 Sum_probs=89.8
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
....++......++.+|||+|||+|.++..+++ +..+|+|+|+|+.+++.|++++..+++ .++++
T Consensus 23 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~~~~ 87 (183)
T 2yxd_A 23 IRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI--------------KNCQI 87 (183)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC--------------CSEEE
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC--------------CcEEE
Confidence 444455555667889999999999999999998 455999999999999999999998886 57999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.+|+.+. ++.++||+|++... ..+..++..+.++ |||.+++..
T Consensus 88 ~~~d~~~~-----~~~~~~D~i~~~~~-------~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 88 IKGRAEDV-----LDKLEFNKAFIGGT-------KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp EESCHHHH-----GGGCCCSEEEECSC-------SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred EECCcccc-----ccCCCCcEEEECCc-------ccHHHHHHHHhhC--CCCEEEEEe
Confidence 99999873 44578999997653 4567888888888 999998544
No 103
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.46 E-value=2.5e-13 Score=132.02 Aligned_cols=104 Identities=18% Similarity=0.169 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
..++.+|||||||+|..++.+|.. +..+|+|||+|+.+++.|+++++.+++ .+|++++++++++.
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l--------------~~v~~~~~d~~~~~ 143 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL--------------KGARALWGRAEVLA 143 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC--------------SSEEEEECCHHHHT
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--------------CceEEEECcHHHhh
Confidence 357889999999999999999987 556999999999999999999999887 46999999999874
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.. +...++||+|+|..+ ..+..++..+.++|||||.++.
T Consensus 144 ~~-~~~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 144 RE-AGHREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TS-TTTTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred cc-cccCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEE
Confidence 10 012478999998642 3457889999999999999873
No 104
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.46 E-value=2.3e-13 Score=128.95 Aligned_cols=110 Identities=18% Similarity=0.218 Sum_probs=85.8
Q ss_pred CCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
++.+|||||||+|.++..+|+. +..+|+|||+|+.+++.|++++..+++ .++.++++|+.++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~--------------~nv~~~~~d~~~l~~- 102 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA--------------QNVKLLNIDADTLTD- 102 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC--------------SSEEEECCCGGGHHH-
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC--------------CCEEEEeCCHHHHHh-
Confidence 5679999999999999999987 345999999999999999999998887 579999999988631
Q ss_pred cCCCCCceeEEEeccccccc--cCh-h--hHHHHHHHHhccccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVSEWMGYCL--LYE-S--MLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l--~~~-~--~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.++.++||.|++....... .+. . ....++..+.++|||||.|++.+
T Consensus 103 -~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 103 -VFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp -HCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred -hcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 1567889999864211000 000 0 13678999999999999998544
No 105
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.46 E-value=3.7e-13 Score=123.47 Aligned_cols=114 Identities=24% Similarity=0.315 Sum_probs=92.5
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
..+..++......++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++..+++ ..++.
T Consensus 20 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~-------------~~~~~ 85 (192)
T 1l3i_A 20 EVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGL-------------GDNVT 85 (192)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTC-------------CTTEE
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCC-------------CcceE
Confidence 344455555566788999999999999999999988 5999999999999999999988876 25899
Q ss_pred EEecchhhcccccCCCC-CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 364 VVQGMVEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~-~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.+++.+. ++. ++||+|++.. .+ ..+..++..+.++|+|||.+++..
T Consensus 86 ~~~~d~~~~-----~~~~~~~D~v~~~~---~~---~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 86 LMEGDAPEA-----LCKIPDIDIAVVGG---SG---GELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EEESCHHHH-----HTTSCCEEEEEESC---CT---TCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEecCHHHh-----cccCCCCCEEEECC---ch---HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999998873 222 5899999764 22 245789999999999999998543
No 106
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.46 E-value=2.4e-13 Score=127.23 Aligned_cols=99 Identities=23% Similarity=0.337 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.|++++..+++ .+++++.+|+.+.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v~~~~~d~~~~--- 121 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI--------------YDIALQKTSLLAD--- 121 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC--------------CCCEEEESSTTTT---
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CceEEEecccccc---
Confidence 57889999999999999999998888999999999999999999998887 3499999998764
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
..++||+|++.... ..+..++..+.++|+|||.+++
T Consensus 122 ---~~~~fD~i~~~~~~------~~~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 122 ---VDGKFDLIVANILA------EILLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp ---CCSCEEEEEEESCH------HHHHHHGGGSGGGEEEEEEEEE
T ss_pred ---CCCCceEEEECCcH------HHHHHHHHHHHHhcCCCCEEEE
Confidence 35899999976422 3357889999999999999985
No 107
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.45 E-value=2.7e-14 Score=137.25 Aligned_cols=105 Identities=25% Similarity=0.211 Sum_probs=88.0
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.|++++..+++ .+++.++++|+.++.
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-------------~~~~~~~~~d~~~~~-- 140 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTGM-RVIAIDIDPVKIALARNNAEVYGI-------------ADKIEFICGDFLLLA-- 140 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-------------GGGEEEEESCHHHHG--
T ss_pred cCCCEEEECccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC-------------CcCeEEEECChHHhc--
Confidence 3789999999999999999999985 999999999999999999999887 248999999999873
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.++||+|+++.+ +.+.......+..+.++|+|||.+++..
T Consensus 141 ---~~~~~D~v~~~~~---~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 141 ---SFLKADVVFLSPP---WGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp ---GGCCCSEEEECCC---CSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred ---ccCCCCEEEECCC---cCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 4679999998763 3333444446677899999999988654
No 108
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.45 E-value=4.2e-13 Score=128.07 Aligned_cols=121 Identities=10% Similarity=0.151 Sum_probs=93.4
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~ 361 (497)
.+...+.......++.+|||||||+|..++.++++ + ..+|++||+|+.+++.|+++++..|+.. ++
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~------------~~ 110 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSP------------SR 110 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCG------------GG
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc------------Cc
Confidence 34444444444344569999999999999999986 2 4599999999999999999999988720 48
Q ss_pred eEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
|+++.+|+.++.. .++.++||+|++.. .......++..+.++|||||+|+++...
T Consensus 111 i~~~~gda~~~l~--~~~~~~fD~V~~d~------~~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 111 VRFLLSRPLDVMS--RLANDSYQLVFGQV------SPMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp EEEECSCHHHHGG--GSCTTCEEEEEECC------CTTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred EEEEEcCHHHHHH--HhcCCCcCeEEEcC------cHHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 9999999987631 13368999999753 1234567899999999999999976553
No 109
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.45 E-value=1.7e-13 Score=131.62 Aligned_cols=144 Identities=15% Similarity=0.113 Sum_probs=101.0
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|+++ +.++.+++.++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~----------------------~~~~~~d~~~~~- 94 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK----------------------FNVVKSDAIEYL- 94 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT----------------------SEEECSCHHHHH-
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh----------------------cceeeccHHHHh-
Confidence 45779999999999999999999987 799999999999887743 578899988752
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCceeEEeeecCCCCCCCcc---ccccCcccccc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATMFVAGFGRGGTSLPFW---ENVYGFTMSCV 451 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~~~~~~~~~~~~~~fw---~~v~g~~~~~~ 451 (497)
.+++.++||+|++..+...+ ...++..++.++.++|||||.+++.+.+..... ....+| .....+....+
T Consensus 95 -~~~~~~~fD~i~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l 167 (240)
T 3dli_A 95 -KSLPDKYLDGVMISHFVEHL-DPERLFELLSLCYSKMKYSSYIVIESPNPTSLY-----SLINFYIDPTHKKPVHPETL 167 (240)
T ss_dssp -HTSCTTCBSEEEEESCGGGS-CGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHH-----HHHHHTTSTTCCSCCCHHHH
T ss_pred -hhcCCCCeeEEEECCchhhC-CcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhH-----HHHHHhcCccccccCCHHHH
Confidence 14678999999986533332 233678999999999999999986543211000 000011 22233455667
Q ss_pred chHHHhhhcCCCeEeeeC
Q 010913 452 GREVVQDAAGIPIVDVVD 469 (497)
Q Consensus 452 ~~~~~~~~~~~p~v~~v~ 469 (497)
...+...+|....+....
T Consensus 168 ~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 168 KFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHCCCeEEEEEEec
Confidence 777777777644444444
No 110
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.44 E-value=2.8e-13 Score=131.85 Aligned_cols=111 Identities=23% Similarity=0.291 Sum_probs=86.1
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
..+.+..... ++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|+++.. .+ +
T Consensus 44 ~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~------------------~~--~ 100 (260)
T 2avn_A 44 IGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV------------------KN--V 100 (260)
T ss_dssp HHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC------------------SC--E
T ss_pred HHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC------------------CC--E
Confidence 3444444332 788999999999999999999877 89999999999999987731 12 7
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
+.+++.++ +++.++||+|++..... ....++..+|.++.++|||||.+++...+
T Consensus 101 ~~~d~~~~----~~~~~~fD~v~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 101 VEAKAEDL----PFPSGAFEAVLALGDVL--SYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp EECCTTSC----CSCTTCEEEEEECSSHH--HHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred EECcHHHC----CCCCCCEEEEEEcchhh--hccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 88888876 46788999999753211 11245889999999999999999965543
No 111
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.44 E-value=9.2e-14 Score=125.98 Aligned_cols=97 Identities=16% Similarity=0.232 Sum_probs=83.8
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++ . ++++++.++ +
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~--------------~~v~~~~~d---~-- 69 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----F--------------DSVITLSDP---K-- 69 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----C--------------TTSEEESSG---G--
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----C--------------CCcEEEeCC---C--
Confidence 46788999999999999999999976 999999999999999887 1 478999998 3
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+++.++||+|++.. ++.+..++..++.++.++|||||.+++.
T Consensus 70 --~~~~~~~D~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 70 --EIPDNSVDFILFAN---SFHDMDDKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp --GSCTTCEEEEEEES---CSTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCCCceEEEEEcc---chhcccCHHHHHHHHHHhcCCCCEEEEE
Confidence 36788999999765 5556678899999999999999999854
No 112
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.44 E-value=5.9e-13 Score=127.33 Aligned_cols=110 Identities=15% Similarity=0.194 Sum_probs=86.1
Q ss_pred HhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 290 LENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 290 ~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
+....+.++.+|||+|||+|.++..+++. |..+|+|+|+|+.+++.|+++++.+ .++.++.+|
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------~~v~~~~~d 130 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----------------ENIIPILGD 130 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC----------------TTEEEEECC
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC----------------CCeEEEECC
Confidence 44455678899999999999999999988 6569999999999999999886443 479999999
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+......++++ .+||+|+... ........++..+.++|||||.+++.
T Consensus 131 ~~~~~~~~~~~-~~~D~v~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 131 ANKPQEYANIV-EKVDVIYEDV-----AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TTCGGGGTTTS-CCEEEEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccccccC-ccEEEEEEec-----CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 98732112344 7899999432 23334477899999999999999853
No 113
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.44 E-value=2.4e-13 Score=130.39 Aligned_cols=105 Identities=18% Similarity=0.232 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||||||+|..+..+++. +..+|+|+|+++.+++.|+++++..++ .++++++.+|+.+..
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~- 135 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF-------------ENQVRIIEGNALEQF- 135 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC-------------TTTEEEEESCGGGCH-
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCcEEEEECCHHHHH-
Confidence 46789999999999999999985 245999999999999999999999887 358999999998752
Q ss_pred ccC-CCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 375 SMQ-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 375 ~l~-~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+ ...++||+|++.. .......++..+.++|||||+|+++.
T Consensus 136 --~~~~~~~fD~V~~~~------~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 136 --ENVNDKVYDMIFIDA------AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp --HHHTTSCEEEEEEET------TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred --HhhccCCccEEEEcC------cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 2 2267899999643 23456779999999999999998643
No 114
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.44 E-value=2.6e-13 Score=132.18 Aligned_cols=108 Identities=24% Similarity=0.372 Sum_probs=89.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.+... +.++.+|||+|||+|.+++.+++.|+ +|+|+|+++.+++.|++++..+++ . ++
T Consensus 109 ~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~--------------~-v~ 170 (254)
T 2nxc_A 109 LALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGV--------------R-PR 170 (254)
T ss_dssp HHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTC--------------C-CE
T ss_pred HHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCC--------------c-EE
Confidence 344444433 36789999999999999999999998 999999999999999999998886 3 89
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++.+++.+. ++.++||+|+++.+. ..+..++..+.++|||||.+++
T Consensus 171 ~~~~d~~~~-----~~~~~fD~Vv~n~~~------~~~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 171 FLEGSLEAA-----LPFGPFDLLVANLYA------ELHAALAPRYREALVPGGRALL 216 (254)
T ss_dssp EEESCHHHH-----GGGCCEEEEEEECCH------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECChhhc-----CcCCCCCEEEECCcH------HHHHHHHHHHHHHcCCCCEEEE
Confidence 999998874 345789999976421 2457889999999999999985
No 115
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.44 E-value=4.1e-13 Score=138.40 Aligned_cols=119 Identities=22% Similarity=0.248 Sum_probs=94.8
Q ss_pred HHHHHHHHhCC--CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 010913 283 DSYRQAILENP--SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (497)
Q Consensus 283 ~~y~~~i~~~~--~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~ 360 (497)
..+.+.+.... ...++.+|||+|||+|.++..+++.|+ +|+|||+|+.+++.|++++..+++
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~--------------- 280 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL--------------- 280 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC---------------
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC---------------
Confidence 34444444322 235788999999999999999999987 999999999999999999999886
Q ss_pred ceEEEecchhhcccccCCCCCceeEEEeccccccc--cChhhHHHHHHHHhccccCCcEEecc
Q 010913 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCL--LYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 361 ~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l--~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.++++.+|+.+.. .+.++||+|++++..+.. ........++..+.++|||||.+++.
T Consensus 281 ~v~~~~~D~~~~~----~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 281 KAQALHSDVDEAL----TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CCEEEECSTTTTS----CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEEEcchhhcc----ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 4899999998863 345899999998643221 11456788999999999999999843
No 116
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.44 E-value=2.4e-13 Score=127.27 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++..+++ .+++++.+++.++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--------------~~v~~~~~d~~~~~-- 128 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL--------------ENIEPVQSRVEEFP-- 128 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC--------------SSEEEEECCTTTSC--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCeEEEecchhhCC--
Confidence 5789999999999999999987 445999999999999999999998886 45999999998762
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+.++||+|++..+ ..+..++..+.++|+|||.+++.
T Consensus 129 ---~~~~~D~i~~~~~-------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 129 ---SEPPFDGVISRAF-------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ---CCSCEEEEECSCS-------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ---ccCCcCEEEEecc-------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 4578999997531 34678999999999999999854
No 117
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.44 E-value=4.6e-13 Score=134.02 Aligned_cols=121 Identities=14% Similarity=0.123 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|+++....+... ......++.++++|+..+...
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRR-------DSEYIFSAEFITADSSKELLI 105 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSS-------CC-CCCEEEEEECCTTTSCST
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcc-------cccccceEEEEEecccccchh
Confidence 4678999999999999999998766699999999999999999876532000 000024799999999886311
Q ss_pred cCC--CCCceeEEEeccccccc-cChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 376 MQI--QPHSVDVLVSEWMGYCL-LYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 376 l~~--~~~~fDvIvs~~~~~~l-~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
.++ +.++||+|+|....+.+ .+...+..+|.++.++|||||.+++.+.
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 113 34589999986533222 4556778999999999999999996544
No 118
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=7.3e-14 Score=134.43 Aligned_cols=108 Identities=16% Similarity=0.053 Sum_probs=84.3
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.+.++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++. ..+++++++|+.++.
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~-----------------~~~~~~~~~d~~~~~ 114 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT-----------------AANISYRLLDGLVPE 114 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC-----------------CTTEEEEECCTTCHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc-----------------ccCceEEECcccccc
Confidence 356789999999999999999999987 89999999999999998751 147999999998864
Q ss_pred cccCCC-CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 374 ESMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 374 ~~l~~~-~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
...++. ...||+|++..+.+.+ ...++..++.++.++|||||.+++
T Consensus 115 ~~~~~~~~~~~d~v~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i 161 (245)
T 3ggd_A 115 QAAQIHSEIGDANIYMRTGFHHI-PVEKRELLGQSLRILLGKQGAMYL 161 (245)
T ss_dssp HHHHHHHHHCSCEEEEESSSTTS-CGGGHHHHHHHHHHHHTTTCEEEE
T ss_pred cccccccccCccEEEEcchhhcC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 111111 1248999987533322 333788999999999999998763
No 119
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=3e-13 Score=132.20 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=90.3
Q ss_pred hCCCCCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHh---CCCCCCCCCCCCCCCCCCceEEEe
Q 010913 291 ENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKD---NDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~---~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
......++.+|||+|||+|.+++.+++.+ ..+|+|||+++.+++.|++++.. +++ .+++.+++
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l-------------~~~v~~~~ 96 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF-------------SARIEVLE 96 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT-------------GGGEEEEE
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC-------------cceEEEEe
Confidence 34455678899999999999999999884 45999999999999999999887 776 24799999
Q ss_pred cchhhcccc---cCCCCCceeEEEeccccccc---------------cChhhHHHHHHHHhccccCCcEEec
Q 010913 367 GMVEELGES---MQIQPHSVDVLVSEWMGYCL---------------LYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 367 gd~~~l~~~---l~~~~~~fDvIvs~~~~~~l---------------~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+|+.++... .+++.++||+|++++..+.. .....+..++..+.++|||||.+++
T Consensus 97 ~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 97 ADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp CCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 999876210 02457899999998532211 0112367899999999999999984
No 120
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.44 E-value=5e-13 Score=127.52 Aligned_cols=103 Identities=18% Similarity=0.187 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.+|.+|||||||+|.+++.+++.| +.+|+|+|+++.+++.|+++++.+|+. ++|+++.+|+.+.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-------------~~i~~~~~d~l~~-- 78 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK-------------EKIQVRLANGLAA-- 78 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-------------TTEEEEECSGGGG--
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------ceEEEEECchhhh--
Confidence 578899999999999999999986 568999999999999999999999983 5899999998653
Q ss_pred ccCCCCC-ceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPH-SVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~-~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
++++ +||+|+...|+- ..+..+|......|+|+|.++.+
T Consensus 79 ---l~~~~~~D~IviaG~Gg-----~~i~~Il~~~~~~L~~~~~lVlq 118 (225)
T 3kr9_A 79 ---FEETDQVSVITIAGMGG-----RLIARILEEGLGKLANVERLILQ 118 (225)
T ss_dssp ---CCGGGCCCEEEEEEECH-----HHHHHHHHHTGGGCTTCCEEEEE
T ss_pred ---cccCcCCCEEEEcCCCh-----HHHHHHHHHHHHHhCCCCEEEEE
Confidence 3434 699998765543 23577899999999999999843
No 121
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=5e-13 Score=122.94 Aligned_cols=103 Identities=22% Similarity=0.253 Sum_probs=84.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.|+++. .++.++.+|+.++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~-------------------~~~~~~~~d~~~~-- 101 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF-------------------PEARWVVGDLSVD-- 101 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-------------------TTSEEEECCTTTS--
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC-------------------CCCcEEEcccccC--
Confidence 35788999999999999999999976 9999999999999998774 3578999999886
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+++.++||+|++............+..++..+.++|+|||.+++.
T Consensus 102 --~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 102 --QISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp --CCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEE
Confidence 366789999998621111223456788999999999999999853
No 122
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.43 E-value=8.4e-13 Score=129.89 Aligned_cols=120 Identities=18% Similarity=0.243 Sum_probs=94.2
Q ss_pred hHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 010913 282 TDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (497)
Q Consensus 282 ~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~ 360 (497)
++.+...++.... .++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++..+++ .
T Consensus 95 te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~--------------~ 159 (276)
T 2b3t_A 95 TECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI--------------K 159 (276)
T ss_dssp HHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC--------------C
T ss_pred HHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------C
Confidence 4555566665544 56789999999999999999976 455999999999999999999988876 4
Q ss_pred ceEEEecchhhcccccCCCCCceeEEEeccccc----------cccCh------------hhHHHHHHHHhccccCCcEE
Q 010913 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGY----------CLLYE------------SMLSSVLFARDQWLKPGGAI 418 (497)
Q Consensus 361 ~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~----------~l~~~------------~~l~~vL~~~~r~LkpgG~l 418 (497)
+++++++|+.+. ++.++||+|++++... .+.++ .....++..+.++|||||.+
T Consensus 160 ~v~~~~~d~~~~-----~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l 234 (276)
T 2b3t_A 160 NIHILQSDWFSA-----LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFL 234 (276)
T ss_dssp SEEEECCSTTGG-----GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred ceEEEEcchhhh-----cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEE
Confidence 799999999774 3467899999975311 11111 34578899999999999999
Q ss_pred ecc
Q 010913 419 LPD 421 (497)
Q Consensus 419 i~~ 421 (497)
++.
T Consensus 235 ~~~ 237 (276)
T 2b3t_A 235 LLE 237 (276)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
No 123
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.43 E-value=4.3e-13 Score=138.56 Aligned_cols=115 Identities=16% Similarity=0.149 Sum_probs=90.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-ceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG-KMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~-~i~~i~gd~~~l~~ 374 (497)
.++.+|||+|||+|.+++.+|+.|+.+|+|||+|+.+++.|+++++.|++. + +++++++|+.++..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~-------------~~~v~~~~~D~~~~l~ 277 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLD-------------MANHQLVVMDVFDYFK 277 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCC-------------CTTEEEEESCHHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------ccceEEEECCHHHHHH
Confidence 578899999999999999999988889999999999999999999999872 3 79999999987521
Q ss_pred ccCCCCCceeEEEecccccc-----cc-ChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 375 SMQIQPHSVDVLVSEWMGYC-----LL-YESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~-----l~-~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
.+.....+||+|++.+..+. .. .......++..+.++|+|||+|+++.+
T Consensus 278 ~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 278 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 11112458999998764321 11 123456678888999999999986544
No 124
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.43 E-value=4e-13 Score=130.09 Aligned_cols=109 Identities=26% Similarity=0.384 Sum_probs=91.8
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
..++....+.++.+|||+|||+|.++..+++. | ..+|+|+|+|+.+++.|+++++.+++ .+++++
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-------------~~~v~~ 149 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-------------DDRVTI 149 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-------------TTTEEE
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-------------CCceEE
Confidence 45666667788999999999999999999998 4 46999999999999999999998887 246999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+.+|+.+. ++.++||+|++.+ ..+..++..+.++|+|||.+++.
T Consensus 150 ~~~d~~~~-----~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 150 KLKDIYEG-----IEEENVDHVILDL--------PQPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp ECSCGGGC-----CCCCSEEEEEECS--------SCGGGGHHHHHHHEEEEEEEEEE
T ss_pred EECchhhc-----cCCCCcCEEEECC--------CCHHHHHHHHHHHcCCCCEEEEE
Confidence 99999864 5678899999753 23456888999999999999843
No 125
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.43 E-value=3.2e-13 Score=132.06 Aligned_cols=119 Identities=18% Similarity=0.199 Sum_probs=92.0
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CC-CEEEEEeCCHH------HHHHHHHHHHhCCCCCCCCCCCCCC
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEK------MAAVATQIAKDNDFWWDRPQSEGNI 356 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~-~~V~gvD~S~~------~i~~A~~~~~~~gl~~~~~~~~~~~ 356 (497)
....++....+.++.+|||||||+|.++..+++. |. .+|+|+|+|+. +++.|++++..+++
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~----------- 99 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL----------- 99 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----------
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----------
Confidence 3344555556678999999999999999999988 53 59999999997 89999999988776
Q ss_pred CCCCceEEEecc-hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 357 NNAGKMEVVQGM-VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 357 ~~~~~i~~i~gd-~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.++++++.+| ..... ++++.++||+|++.. ++.+..++..++..+.++++|||.+++.
T Consensus 100 --~~~v~~~~~d~~~~~~--~~~~~~~fD~v~~~~---~l~~~~~~~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 100 --GDRLTVHFNTNLSDDL--GPIADQHFDRVVLAH---SLWYFASANALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp --GGGEEEECSCCTTTCC--GGGTTCCCSEEEEES---CGGGSSCHHHHHHHHHHHTTTCSEEEEE
T ss_pred --CCceEEEECChhhhcc--CCCCCCCEEEEEEcc---chhhCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 2589999998 32221 346778999999765 4444455566777778888889999854
No 126
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=6e-13 Score=136.95 Aligned_cols=121 Identities=13% Similarity=0.133 Sum_probs=95.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
.-.+.++......++.+|||+|||+|.+++.+++.+ ..+|+|||+|+.+++.|++++..+++.. ..++
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~-----------~~~v 277 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA-----------LDRC 277 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGG-----------GGGE
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCc-----------CceE
Confidence 344566777777778999999999999999999984 4599999999999999999999888621 1258
Q ss_pred EEEecchhhcccccCCCCCceeEEEecccccccc--ChhhHHHHHHHHhccccCCcEEec
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLL--YESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~--~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.++.+|+.+. ++.++||+|++++..+... .......++..+.++|||||.+++
T Consensus 278 ~~~~~D~~~~-----~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 278 EFMINNALSG-----VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp EEEECSTTTT-----CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEechhhcc-----CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 8999999873 5678999999986433211 122345789999999999999984
No 127
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.43 E-value=5.4e-13 Score=127.57 Aligned_cols=104 Identities=19% Similarity=0.190 Sum_probs=87.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.+|.+|||||||+|.+++.+++.| +.+|+|+|+++.+++.|+++++.+|+. ++|+++.+|+.+..
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~-------------~~I~~~~gD~l~~~- 85 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT-------------SKIDVRLANGLSAF- 85 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT-------------TTEEEEECSGGGGC-
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEECchhhcc-
Confidence 578999999999999999999986 568999999999999999999999983 58999999998752
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.+..+||+|+...|+- ..+..+|....+.|+++|.++.+
T Consensus 86 ---~~~~~~D~IviaGmGg-----~lI~~IL~~~~~~l~~~~~lIlq 124 (230)
T 3lec_A 86 ---EEADNIDTITICGMGG-----RLIADILNNDIDKLQHVKTLVLQ 124 (230)
T ss_dssp ---CGGGCCCEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ---ccccccCEEEEeCCch-----HHHHHHHHHHHHHhCcCCEEEEE
Confidence 2223799988766543 34567888889999999998843
No 128
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.43 E-value=5.8e-13 Score=129.14 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=87.9
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..+..+++. + ..+|+|+|+|+.+++.|++++...|+ .++|+++.+|+.+..
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-------------~~~v~~~~~d~~~~l 128 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-------------DQRVTLREGPALQSL 128 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-------------TTTEEEEESCHHHHH
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCcEEEEEcCHHHHH
Confidence 46789999999999999999987 3 46999999999999999999999887 358999999998742
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..+ ...++||+|++.. .......++..+.++|||||+|+++..
T Consensus 129 ~~~-~~~~~fD~V~~d~------~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 129 ESL-GECPAFDLIFIDA------DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp HTC-CSCCCCSEEEECS------CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred Hhc-CCCCCeEEEEECC------chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 111 1234899999643 234567789999999999999986544
No 129
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.42 E-value=5.4e-13 Score=131.88 Aligned_cols=126 Identities=18% Similarity=0.237 Sum_probs=91.2
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeC-CHHHHHHHHHHHHhC-----CCCCCCCCCCCCC
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEA-SEKMAAVATQIAKDN-----DFWWDRPQSEGNI 356 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~-S~~~i~~A~~~~~~~-----gl~~~~~~~~~~~ 356 (497)
....+.+.......++.+|||||||+|.+++.+++.|+.+|+|+|+ |+.+++.|++++..| ++. .
T Consensus 65 ~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~---------~ 135 (281)
T 3bzb_A 65 RALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSE---------T 135 (281)
T ss_dssp HHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------------
T ss_pred HHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccc---------c
Confidence 3455666666656788999999999999999999998779999999 899999999999443 330 0
Q ss_pred CCCCceEEEecchhhcccccC--CCCCceeEEEeccccccccChhhHHHHHHHHhcccc---C--CcEEec
Q 010913 357 NNAGKMEVVQGMVEELGESMQ--IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLK---P--GGAILP 420 (497)
Q Consensus 357 ~~~~~i~~i~gd~~~l~~~l~--~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lk---p--gG~li~ 420 (497)
...+++.++..+..+....+. ++.++||+|++. .++.+......++..+.++|+ | ||.+++
T Consensus 136 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~---dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 136 VKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLA---DLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp ---CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEE---SCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred CCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEe---CcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 001367887655433110010 135789999963 356667788999999999999 9 998663
No 130
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.42 E-value=2.4e-13 Score=137.73 Aligned_cols=111 Identities=20% Similarity=0.115 Sum_probs=88.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||+|||+|.+++.+++.|+ +|+|||+|+.+++.|++++..+++.+ .++.++++|+.++...
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~------------~~v~~i~~D~~~~l~~ 218 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQ------------APIRWICEDAMKFIQR 218 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTT------------SCEEEECSCHHHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCc------------cceEEEECcHHHHHHH
Confidence 4678999999999999999999998 99999999999999999999988721 2599999999886311
Q ss_pred cCCCCCceeEEEeccccccc-------cChhhHHHHHHHHhccccCCcEEe
Q 010913 376 MQIQPHSVDVLVSEWMGYCL-------LYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l-------~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
+.....+||+|++++..+.. ........++..+.++|+|||+++
T Consensus 219 ~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~ll 269 (332)
T 2igt_A 219 EERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGL 269 (332)
T ss_dssp HHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEE
T ss_pred HHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEE
Confidence 00014689999997653332 123457789999999999999976
No 131
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.42 E-value=2.4e-13 Score=134.80 Aligned_cols=109 Identities=15% Similarity=0.125 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCCCHhHHHH----HHc-CCCEE--EEEeCCHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCc--eEEE
Q 010913 296 MKGAVVMDIGCGTGILSLFA----AQA-GASRV--IAVEASEKMAAVATQIAKDN-DFWWDRPQSEGNINNAGK--MEVV 365 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~l----a~~-G~~~V--~gvD~S~~~i~~A~~~~~~~-gl~~~~~~~~~~~~~~~~--i~~i 365 (497)
.++.+|||||||+|.++..+ +.. +...| +|+|+|+.|++.|++++... ++ .+ +.+.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~--------------~~v~~~~~ 116 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL--------------ENVKFAWH 116 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC--------------TTEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC--------------CcceEEEE
Confidence 56789999999999766432 222 22344 99999999999999988653 33 23 4556
Q ss_pred ecchhhcccc--cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 366 QGMVEELGES--MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 366 ~gd~~~l~~~--l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.++++++... .++++++||+|++.. ++++..++..+|.++.++|||||.+++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~fD~V~~~~---~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 117 KETSSEYQSRMLEKKELQKWDFIHMIQ---MLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CSCHHHHHHHHHTTTCCCCEEEEEEES---CGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred ecchhhhhhhhccccCCCceeEEEEee---eeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 7777664210 024578999999654 6677788999999999999999999854
No 132
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.42 E-value=8.3e-14 Score=130.39 Aligned_cols=119 Identities=19% Similarity=0.097 Sum_probs=72.3
Q ss_pred hHHHHHHHHhCCCC-CCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 010913 282 TDSYRQAILENPSL-MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (497)
Q Consensus 282 ~~~y~~~i~~~~~~-~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~ 359 (497)
++.+.+.++..... .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+++
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------- 79 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-------------- 79 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------------
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--------------
Confidence 34445555544433 678999999999999999999984 34999999999999999999877653
Q ss_pred CceEEEecchhhcccccCCCC-----CceeEEEeccccccccC-----------------------hhhHHHHHHHHhcc
Q 010913 360 GKMEVVQGMVEELGESMQIQP-----HSVDVLVSEWMGYCLLY-----------------------ESMLSSVLFARDQW 411 (497)
Q Consensus 360 ~~i~~i~gd~~~l~~~l~~~~-----~~fDvIvs~~~~~~l~~-----------------------~~~l~~vL~~~~r~ 411 (497)
+++++++|+.+. ++. ++||+|++++..+.... ......++..+.++
T Consensus 80 -~~~~~~~d~~~~-----~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (215)
T 4dzr_A 80 -VVDWAAADGIEW-----LIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYV 153 (215)
T ss_dssp ----CCHHHHHHH-----HHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGG
T ss_pred -ceEEEEcchHhh-----hhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHH
Confidence 688999998874 333 89999999753211100 00116788889999
Q ss_pred ccCCcE-Eec
Q 010913 412 LKPGGA-ILP 420 (497)
Q Consensus 412 LkpgG~-li~ 420 (497)
|||||+ +++
T Consensus 154 LkpgG~l~~~ 163 (215)
T 4dzr_A 154 LARGRAGVFL 163 (215)
T ss_dssp BCSSSEEEEE
T ss_pred hcCCCeEEEE
Confidence 999999 553
No 133
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.42 E-value=7.5e-13 Score=137.99 Aligned_cols=121 Identities=18% Similarity=0.168 Sum_probs=91.0
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHH-------HHHHHhCCCCCCCCCCCCCC
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVA-------TQIAKDNDFWWDRPQSEGNI 356 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A-------~~~~~~~gl~~~~~~~~~~~ 356 (497)
....++..+.+.++.+|||||||+|.++..+|+. |+.+|+|||+++.+++.| ++++...|+.
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~---------- 299 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR---------- 299 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC----------
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC----------
Confidence 3445556667788999999999999999999996 777899999999999998 8888888741
Q ss_pred CCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 357 NNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 357 ~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
..+++++.++.......++...++||+|+++. .+ +..++..+|.++.++|||||.|++.
T Consensus 300 --~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~---~l-~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 300 --LNNVEFSLKKSFVDNNRVAELIPQCDVILVNN---FL-FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp --CCCEEEEESSCSTTCHHHHHHGGGCSEEEECC---TT-CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred --CCceEEEEcCccccccccccccCCCCEEEEeC---cc-ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 05899998754321000001236899999653 23 3357778899999999999999854
No 134
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.41 E-value=5.8e-13 Score=126.34 Aligned_cols=109 Identities=19% Similarity=0.275 Sum_probs=86.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..+..++++ + ..+|+|+|+++.+++.|++++...|+ .++++++.+|+.+..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~ 123 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-------------NDRVEVRTGLALDSL 123 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-------------TTTEEEEESCHHHHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCcEEEEEcCHHHHH
Confidence 46789999999999999999998 2 34999999999999999999998887 357999999997652
Q ss_pred cccCCC-CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 374 ESMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 374 ~~l~~~-~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..++.. .++||+|++... ......++..+.++|+|||+++++..
T Consensus 124 ~~~~~~~~~~fD~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 124 QQIENEKYEPFDFIFIDAD------KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp HHHHHTTCCCCSEEEECSC------GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred HHHHhcCCCCcCEEEEcCC------cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 111111 267999996532 34567889999999999999986543
No 135
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.41 E-value=7e-13 Score=127.80 Aligned_cols=103 Identities=21% Similarity=0.253 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.+|.+|||||||+|.+++.+++.| +.+|+|+|+++.+++.|+++++.+|+. ++|+++.+|+.+.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-------------~~I~v~~gD~l~~-- 84 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT-------------EQIDVRKGNGLAV-- 84 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-------------TTEEEEECSGGGG--
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------ceEEEEecchhhc--
Confidence 578999999999999999999986 568999999999999999999999983 5799999999875
Q ss_pred ccCCCCC-ceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPH-SVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~-~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+.++ +||+|++..|+- ..+..+|.+....|+++|.|+.+
T Consensus 85 ---~~~~~~~D~IviagmGg-----~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 85 ---IEKKDAIDTIVIAGMGG-----TLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp ---CCGGGCCCEEEEEEECH-----HHHHHHHHHTGGGGTTCCEEEEE
T ss_pred ---cCccccccEEEEeCCch-----HHHHHHHHHHHHHhCCCCEEEEE
Confidence 3334 599998765543 34567889999999999999844
No 136
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.41 E-value=3.8e-13 Score=133.04 Aligned_cols=126 Identities=17% Similarity=0.131 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCC-----CCCCCCCC-----------CC
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDR-----PQSEGNIN-----------NA 359 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~-----~~~~~~~~-----------~~ 359 (497)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.|++++....-.... +....... ..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 478899999999999766666543449999999999999999876432100000 00000000 00
Q ss_pred CceEEEecchhh-ccc-ccCCCCCceeEEEeccccccccC-hhhHHHHHHHHhccccCCcEEecc
Q 010913 360 GKMEVVQGMVEE-LGE-SMQIQPHSVDVLVSEWMGYCLLY-ESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 360 ~~i~~i~gd~~~-l~~-~l~~~~~~fDvIvs~~~~~~l~~-~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
..+.++.+|+.+ +.. ...+++++||+|++....+.+.. ..++..+|.++.++|||||.|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 125677888877 310 00134567999998753222111 568899999999999999999964
No 137
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.41 E-value=2.8e-13 Score=125.02 Aligned_cols=100 Identities=16% Similarity=0.076 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||+|||+|.+++.++.. ++ +|+|+|+|+.|++.|++++..+|+. .++.+ .+....
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~-------------~~v~~--~d~~~~- 110 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTT-------------IKYRF--LNKESD- 110 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCS-------------SEEEE--ECCHHH-
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCC-------------ccEEE--eccccc-
Confidence 55789999999999999999887 55 9999999999999999999999872 36666 444433
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.++++||+|++..+.+++ .+....+..+.+.|+|||++|
T Consensus 111 ----~~~~~~DvVLa~k~LHlL---~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 111 ----VYKGTYDVVFLLKMLPVL---KQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp ----HTTSEEEEEEEETCHHHH---HHTTCCHHHHHHTCEEEEEEE
T ss_pred ----CCCCCcChhhHhhHHHhh---hhhHHHHHHHHHHhCCCCEEE
Confidence 367889999976544333 566677779999999999988
No 138
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.41 E-value=1.6e-12 Score=124.39 Aligned_cols=109 Identities=19% Similarity=0.235 Sum_probs=85.9
Q ss_pred hCCCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 291 ENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
....+.++.+|||+|||+|.++..+++. | ..+|+|+|+|+.+++.+.++++.+ .++.++.+|
T Consensus 71 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----------------~~v~~~~~d 134 (233)
T 2ipx_A 71 DQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----------------TNIIPVIED 134 (233)
T ss_dssp SCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----------------TTEEEECSC
T ss_pred heecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----------------CCeEEEEcc
Confidence 3455678899999999999999999987 3 469999999999988888887765 379999999
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+.+... +++..++||+|++... .......++.++.++|||||.+++.
T Consensus 135 ~~~~~~-~~~~~~~~D~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 135 ARHPHK-YRMLIAMVDVIFADVA-----QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp TTCGGG-GGGGCCCEEEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCChhh-hcccCCcEEEEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 987421 1345678999998642 2334456688899999999999863
No 139
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.40 E-value=7.3e-13 Score=127.58 Aligned_cols=109 Identities=15% Similarity=0.156 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh------CCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD------NDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~------~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
.++.+|||||||+|.++..+|+. +...|+|||+|+.|++.|++++.. .++ .+|.++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~--------------~nv~~~~~d 110 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF--------------QNIACLRSN 110 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC--------------TTEEEEECC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC--------------CeEEEEECc
Confidence 46789999999999999999987 445999999999999999988753 333 579999999
Q ss_pred hhh-cccccCCCCCceeEEEeccccccccChh--------hHHHHHHHHhccccCCcEEeccCc
Q 010913 369 VEE-LGESMQIQPHSVDVLVSEWMGYCLLYES--------MLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 369 ~~~-l~~~l~~~~~~fDvIvs~~~~~~l~~~~--------~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+.+ +.. .++.++||.|++.. ...+.. ....++..+.++|||||.|++.+.
T Consensus 111 ~~~~l~~--~~~~~~~D~v~~~~---~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 111 AMKHLPN--FFYKGQLTKMFFLF---PDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp TTTCHHH--HCCTTCEEEEEEES---CC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHhhhh--hCCCcCeeEEEEeC---CCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 986 321 15678999998532 111110 014689999999999999986543
No 140
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.40 E-value=4.8e-13 Score=127.00 Aligned_cols=109 Identities=19% Similarity=0.206 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..+..+++. + ..+|+|+|+++.+++.|+++++..++ .++++++++++.+..
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~ 129 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-------------SDKIGLRLSPAKDTL 129 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-------------TTTEEEEESCHHHHH
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-------------CCceEEEeCCHHHHH
Confidence 46789999999999999999987 3 46999999999999999999999887 357999999997652
Q ss_pred cccCC--CCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 374 ESMQI--QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 374 ~~l~~--~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..++. ..++||+|++.. .......++..+.++|||||+|+++..
T Consensus 130 ~~~~~~~~~~~fD~v~~~~------~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 130 AELIHAGQAWQYDLIYIDA------DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp HHHHTTTCTTCEEEEEECS------CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHhhhccCCCCccEEEECC------CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 11110 117899999643 234567789999999999999985443
No 141
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.40 E-value=8.7e-13 Score=124.71 Aligned_cols=107 Identities=25% Similarity=0.308 Sum_probs=86.1
Q ss_pred HHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
+..... .++.+|||+|||+|.++..+++.| .+|+|+|+|+.+++.|+++. ..++.+|
T Consensus 25 l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~---------------------~~~~~~d 81 (230)
T 3cc8_A 25 LLKHIK-KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL---------------------DHVVLGD 81 (230)
T ss_dssp HHTTCC-TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS---------------------SEEEESC
T ss_pred HHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC---------------------CcEEEcc
Confidence 444444 678999999999999999999987 59999999999998877541 3678889
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+.+.. .+++.++||+|++.. ++.+..++..++..+.++|+|||.+++...
T Consensus 82 ~~~~~--~~~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 82 IETMD--MPYEEEQFDCVIFGD---VLEHLFDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp TTTCC--CCSCTTCEEEEEEES---CGGGSSCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred hhhcC--CCCCCCccCEEEECC---hhhhcCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 87643 246678999999754 555666778999999999999999996543
No 142
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.39 E-value=6.7e-13 Score=130.58 Aligned_cols=109 Identities=18% Similarity=0.262 Sum_probs=88.2
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCceEE
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDN-DFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~-gl~~~~~~~~~~~~~~~~i~~ 364 (497)
.+.....+.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++..+ |. +++++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~--------------~~v~~ 166 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI--------------GNVRT 166 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC--------------TTEEE
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC--------------CcEEE
Confidence 4556667788999999999999999999987 3459999999999999999999887 75 58999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+.+|+.+. ++.++||+|++.. +.+..++..+.++|||||.+++..+
T Consensus 167 ~~~d~~~~-----~~~~~fD~Vi~~~--------~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 167 SRSDIADF-----ISDQMYDAVIADI--------PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp ECSCTTTC-----CCSCCEEEEEECC--------SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred EECchhcc-----CcCCCccEEEEcC--------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99999873 5567899999742 2445788999999999999986544
No 143
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.39 E-value=1.2e-12 Score=131.55 Aligned_cols=112 Identities=22% Similarity=0.150 Sum_probs=89.4
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCC--CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA--SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~--~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~ 361 (497)
.....++....+.++.+|||||||+|.++..+++.+. .+|+|+|+|+.+++.|++++..+|+ .+
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~--------------~~ 127 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI--------------EN 127 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CS
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CC
Confidence 3444555666678899999999999999999998843 4799999999999999999998887 46
Q ss_pred eEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++++.+|+.+.. .+.++||+|++..+...+ . ..+.++|||||++++..
T Consensus 128 v~~~~~d~~~~~----~~~~~fD~Iv~~~~~~~~---~------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 128 VIFVCGDGYYGV----PEFSPYDVIFVTVGVDEV---P------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEEEESCGGGCC----GGGCCEEEEEECSBBSCC---C------HHHHHHEEEEEEEEEEB
T ss_pred eEEEECChhhcc----ccCCCeEEEEEcCCHHHH---H------HHHHHhcCCCcEEEEEE
Confidence 999999998752 235789999987643322 2 45678999999998653
No 144
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.38 E-value=1.7e-12 Score=123.63 Aligned_cols=109 Identities=22% Similarity=0.233 Sum_probs=85.5
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.....++......++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|++++..++ ++.
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----------------~v~ 119 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN----------------NIK 119 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS----------------SEE
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC----------------CeE
Confidence 444556666667889999999999999999999998 599999999999999999875442 689
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.+|+.+.. ...++||+|++... +.+.. ..+.++|||||.+++..
T Consensus 120 ~~~~d~~~~~----~~~~~fD~v~~~~~---~~~~~------~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 120 LILGDGTLGY----EEEKPYDRVVVWAT---APTLL------CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp EEESCGGGCC----GGGCCEEEEEESSB---BSSCC------HHHHHTEEEEEEEEEEE
T ss_pred EEECCccccc----ccCCCccEEEECCc---HHHHH------HHHHHHcCCCcEEEEEE
Confidence 9999998731 23578999997653 32222 35788999999998554
No 145
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.38 E-value=3.5e-13 Score=140.33 Aligned_cols=117 Identities=20% Similarity=0.250 Sum_probs=91.1
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
..+.+.++....+.++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.|+++ ++.. ...
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~------------~~~ 155 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRV------------RTD 155 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCE------------ECS
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCc------------cee
Confidence 45667777877778899999999999999999999988 999999999999988765 3310 011
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
.+..++...+ +++.++||+|++.. ++.|..++..++.++.++|||||++++...
T Consensus 156 ~~~~~~~~~l----~~~~~~fD~I~~~~---vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 156 FFEKATADDV----RRTEGPANVIYAAN---TLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp CCSHHHHHHH----HHHHCCEEEEEEES---CGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eechhhHhhc----ccCCCCEEEEEECC---hHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 1233444444 35678999999765 666667899999999999999999996543
No 146
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.38 E-value=3e-13 Score=129.01 Aligned_cols=92 Identities=20% Similarity=0.196 Sum_probs=78.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..+++.|+ +|+|+|+|+.+++.|+++. .+++++++|+.+.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~--- 103 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA-------------------PHADVYEWNGKGE--- 103 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC-------------------TTSEEEECCSCSS---
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC-------------------CCceEEEcchhhc---
Confidence 5789999999999999999999977 9999999999999998871 4789999999543
Q ss_pred cCCC-CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 376 MQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 376 l~~~-~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
++++ .++||+|++. .++..++.++.++|||||.++
T Consensus 104 ~~~~~~~~fD~v~~~---------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 104 LPAGLGAPFGLIVSR---------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCTTCCCCEEEEEEE---------SCCSGGGGGHHHHEEEEEEEE
T ss_pred cCCcCCCCEEEEEeC---------CCHHHHHHHHHHHcCCCcEEE
Confidence 2566 7899999975 244567888999999999998
No 147
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.38 E-value=1.6e-13 Score=129.70 Aligned_cols=107 Identities=19% Similarity=0.152 Sum_probs=79.6
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHH----HhCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIA----KDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~----~~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
..++.+|||||||+|.++..+++.+ ..+|+|+|+|+.|++.+.+.+ ...++ +++.++++|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~--------------~~v~~~~~d~ 90 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL--------------PNLLYLWATA 90 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC--------------TTEEEEECCS
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC--------------CceEEEecch
Confidence 4678999999999999999999983 459999999999888543333 23443 5899999999
Q ss_pred hhcccccCCCCCceeEEEecccccccc--ChhhHHHHHHHHhccccCCcEEec
Q 010913 370 EELGESMQIQPHSVDVLVSEWMGYCLL--YESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 370 ~~l~~~l~~~~~~fDvIvs~~~~~~l~--~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.++ +++.++ |.|+.......++ +..++..++.++.++|||||.+++
T Consensus 91 ~~l----~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 91 ERL----PPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp TTC----CSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred hhC----CCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 987 466666 7776321111111 333447899999999999999986
No 148
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.37 E-value=9.9e-13 Score=127.30 Aligned_cols=118 Identities=14% Similarity=0.061 Sum_probs=86.9
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc---CCCEEEEEeCCHHHHHHHHHHHHhC---CCCCCCCCCCCCCCCCC
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA---GASRVIAVEASEKMAAVATQIAKDN---DFWWDRPQSEGNINNAG 360 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~---G~~~V~gvD~S~~~i~~A~~~~~~~---gl~~~~~~~~~~~~~~~ 360 (497)
..++......++.+|||+|||+|.+++.+++. +..+|+|+|+|+.+++.|++++..+ ++. .
T Consensus 41 ~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~-------------~ 107 (250)
T 1o9g_A 41 QRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT-------------A 107 (250)
T ss_dssp HHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH-------------H
T ss_pred HHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc-------------c
Confidence 34444443346789999999999999999886 2348999999999999999988765 431 1
Q ss_pred c-------------------------eE-------------EEecchhhcccccCC----CCCceeEEEeccccccccC-
Q 010913 361 K-------------------------ME-------------VVQGMVEELGESMQI----QPHSVDVLVSEWMGYCLLY- 397 (497)
Q Consensus 361 ~-------------------------i~-------------~i~gd~~~l~~~l~~----~~~~fDvIvs~~~~~~l~~- 397 (497)
+ ++ ++++|+.+.. +. ...+||+|++++.......
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~fD~Iv~npp~~~~~~~ 184 (250)
T 1o9g_A 108 RELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPR---ALSAVLAGSAPDVVLTDLPYGERTHW 184 (250)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGG---GHHHHHTTCCCSEEEEECCGGGSSSS
T ss_pred cchhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeeccccccc---ccccccCCCCceEEEeCCCeeccccc
Confidence 1 55 9999987642 11 3458999999853222221
Q ss_pred -----hhhHHHHHHHHhccccCCcEEec
Q 010913 398 -----ESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 398 -----~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
......++..+.++|+|||++++
T Consensus 185 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 185 EGQVPGQPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp SSCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cccccccHHHHHHHHHHHhcCCCcEEEE
Confidence 24567899999999999999985
No 149
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.37 E-value=2.4e-12 Score=131.31 Aligned_cols=124 Identities=23% Similarity=0.138 Sum_probs=98.0
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAG--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G--~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~ 360 (497)
..+...++......++.+|||+|||+|.+++.++..+ ..+|+|+|+++.+++.|+++++.+|+ .
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~--------------~ 254 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL--------------S 254 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC--------------T
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC--------------C
Confidence 3456666666777889999999999999999999974 35899999999999999999999987 3
Q ss_pred ceEEEecchhhcccccCCCCCceeEEEecccccc-ccC----hhhHHHHHHHHhccccCCcEEeccCce
Q 010913 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYC-LLY----ESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 361 ~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~-l~~----~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
+++++++|+.++. .+...||+|++++.... +.. ......++..+.++|||||.+++.+++
T Consensus 255 ~i~~~~~D~~~~~----~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 255 WIRFLRADARHLP----RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp TCEEEECCGGGGG----GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred ceEEEeCChhhCc----cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 7999999999874 45567999999863211 111 122367889999999999999865543
No 150
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=2.3e-12 Score=121.40 Aligned_cols=111 Identities=19% Similarity=0.132 Sum_probs=86.4
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcC-C-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-A-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G-~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
....++....+.++.+|||||||+|.++..+++.+ . .+|+|+|+|+.+++.|++++...++ .++
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~v 130 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY--------------DNV 130 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC--------------TTE
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCe
Confidence 34455555567789999999999999999999984 2 5999999999999999999887776 469
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.++.+|+.... ...++||+|++... +.+.. ..+.++|||||.+++..
T Consensus 131 ~~~~~d~~~~~----~~~~~fD~v~~~~~---~~~~~------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 131 IVIVGDGTLGY----EPLAPYDRIYTTAA---GPKIP------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp EEEESCGGGCC----GGGCCEEEEEESSB---BSSCC------HHHHHTEEEEEEEEEEE
T ss_pred EEEECCcccCC----CCCCCeeEEEECCc---hHHHH------HHHHHHcCCCcEEEEEE
Confidence 99999985431 12568999997653 32222 36789999999998543
No 151
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=1.9e-12 Score=125.27 Aligned_cols=110 Identities=25% Similarity=0.261 Sum_probs=91.1
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCceE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDN-DFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~-gl~~~~~~~~~~~~~~~~i~ 363 (497)
..++....+.++.+|||+|||+|.++..+++. | ..+|+++|+++.+++.|++++..+ |. +++.
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~--------------~~v~ 151 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV--------------ENVR 151 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC--------------CCEE
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--------------CCEE
Confidence 34555566788999999999999999999998 5 459999999999999999998776 63 5899
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.+|+.+. +++.++||+|++.+ ..+..++..+.++|+|||.+++..
T Consensus 152 ~~~~d~~~~----~~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 152 FHLGKLEEA----ELEEAAYDGVALDL--------MEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp EEESCGGGC----CCCTTCEEEEEEES--------SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEECchhhc----CCCCCCcCEEEECC--------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 999999876 36678899999743 234568899999999999998544
No 152
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.37 E-value=1.1e-12 Score=129.11 Aligned_cols=118 Identities=12% Similarity=0.069 Sum_probs=91.9
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
...+|.+|||+|||+|..+..+++. |..+|+|+|+|+.+++.++++++.+|+ .++.++.+|+.+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~--------------~~v~~~~~D~~~ 145 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV--------------LNTIIINADMRK 145 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEEESCHHH
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC--------------CcEEEEeCChHh
Confidence 3568899999999999999999985 546999999999999999999999887 489999999988
Q ss_pred cccccCCCCCceeEEEeccccccc--c-------------ChhhHHHHHHHHhccccCCcEEeccCcee
Q 010913 372 LGESMQIQPHSVDVLVSEWMGYCL--L-------------YESMLSSVLFARDQWLKPGGAILPDTATM 425 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~~~~l--~-------------~~~~l~~vL~~~~r~LkpgG~li~~~~~~ 425 (497)
+........++||+|++...-..+ . .......+|..+.++|||||.++.++|++
T Consensus 146 ~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 146 YKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 741000025689999986421111 0 11344788999999999999999887766
No 153
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.37 E-value=1.2e-12 Score=125.06 Aligned_cols=106 Identities=23% Similarity=0.313 Sum_probs=87.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++...++ .+++.++.+|+.+..
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~- 118 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL-------------ESRIELLFGDALQLG- 118 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC-------------TTTEEEECSCGGGSH-
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCcEEEEECCHHHHH-
Confidence 46789999999999999999988 345999999999999999999998887 247999999998742
Q ss_pred ccCCC--CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 375 SMQIQ--PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 375 ~l~~~--~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+.. .++||+|++.. .. .....++..+.++|+|||+++++..
T Consensus 119 --~~~~~~~~fD~I~~~~---~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 119 --EKLELYPLFDVLFIDA---AK---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp --HHHTTSCCEEEEEEEG---GG---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred --HhcccCCCccEEEECC---CH---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 112 57899999754 22 3567899999999999999997643
No 154
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.36 E-value=1.8e-12 Score=127.58 Aligned_cols=99 Identities=19% Similarity=0.146 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.+|.+|||+|||+|.+++.+|+.|+.+|+|+|+++.+++.++++++.|++. ++++++++|+.++
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~-------------~~v~~~~~D~~~~--- 187 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE-------------DRMSAYNMDNRDF--- 187 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT-------------TTEEEECSCTTTC---
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEeCcHHHh---
Confidence 679999999999999999999999889999999999999999999999983 6899999999887
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.+.+.||.|+++.+... ..++..+.++|||||.|.
T Consensus 188 --~~~~~~D~Vi~~~p~~~-------~~~l~~a~~~lk~gG~ih 222 (278)
T 3k6r_A 188 --PGENIADRILMGYVVRT-------HEFIPKALSIAKDGAIIH 222 (278)
T ss_dssp --CCCSCEEEEEECCCSSG-------GGGHHHHHHHEEEEEEEE
T ss_pred --ccccCCCEEEECCCCcH-------HHHHHHHHHHcCCCCEEE
Confidence 34678999996643222 235566678999999875
No 155
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.36 E-value=1.3e-12 Score=132.82 Aligned_cols=116 Identities=19% Similarity=0.178 Sum_probs=91.9
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
...+.++......++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|++++..+++ .+
T Consensus 183 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~---------------~~ 247 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV---------------EG 247 (343)
T ss_dssp HHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC---------------CC
T ss_pred HHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---------------CC
Confidence 3455566655445678999999999999999999864 4999999999999999999998876 46
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccc--cChhhHHHHHHHHhccccCCcEEec
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCL--LYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l--~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.++.+|+... ..++||+|+++++.+.. .+......++..+.++|||||.+++
T Consensus 248 ~~~~~d~~~~------~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 248 EVFASNVFSE------VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp EEEECSTTTT------CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEcccccc------ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 7788888653 36789999998642211 1235678899999999999999984
No 156
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.36 E-value=4.6e-12 Score=120.54 Aligned_cols=109 Identities=17% Similarity=0.237 Sum_probs=84.1
Q ss_pred hCCCCCCCCEEEEEcCCCCHhHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 291 ENPSLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
....+.++.+|||+|||+|.++..+++. |. .+|+|+|+|+.+++.++++++.+ .+++++.+|
T Consensus 67 ~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----------------~~v~~~~~d 130 (227)
T 1g8a_A 67 KNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----------------RNIVPILGD 130 (227)
T ss_dssp CCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----------------TTEEEEECC
T ss_pred HhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----------------CCCEEEEcc
Confidence 3344678899999999999999999987 53 69999999999999999887543 379999999
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+.+.... ....++||+|++... .......++..+.++|||||.+++.
T Consensus 131 ~~~~~~~-~~~~~~~D~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 131 ATKPEEY-RALVPKVDVIFEDVA-----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp TTCGGGG-TTTCCCEEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcchh-hcccCCceEEEECCC-----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 9874210 112458999997642 2233445699999999999999843
No 157
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.36 E-value=1.6e-12 Score=130.58 Aligned_cols=114 Identities=16% Similarity=0.164 Sum_probs=90.6
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
.+.+|.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.++++++.+|+ .++.++++|+..
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~--------------~~v~~~~~D~~~ 180 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV--------------LNVILFHSSSLH 180 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC--------------CSEEEESSCGGG
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC--------------CeEEEEECChhh
Confidence 4578899999999999999999986 335999999999999999999998887 479999999988
Q ss_pred cccccCCCCCceeEEEeccc--ccc-ccChh----------------hHHHHHHHHhccccCCcEEeccCcee
Q 010913 372 LGESMQIQPHSVDVLVSEWM--GYC-LLYES----------------MLSSVLFARDQWLKPGGAILPDTATM 425 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~--~~~-l~~~~----------------~l~~vL~~~~r~LkpgG~li~~~~~~ 425 (497)
+. ...++||+|++... +.. +...+ ....+|..+.++|||||+++.++|++
T Consensus 181 ~~----~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 181 IG----ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp GG----GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cc----cccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 74 23568999998532 111 11111 12578999999999999999887765
No 158
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.36 E-value=1.4e-12 Score=129.17 Aligned_cols=121 Identities=20% Similarity=0.186 Sum_probs=90.2
Q ss_pred hHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 010913 282 TDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 282 ~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~ 361 (497)
++.+.+.++......++.+|||+|||+|.+++.+++.+..+|+|+|+|+.+++.|++++..+++. ++
T Consensus 108 te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~-------------~~ 174 (284)
T 1nv8_A 108 TEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVS-------------DR 174 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCT-------------TS
T ss_pred HHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------Cc
Confidence 44455555443322366799999999999999999884349999999999999999999999872 46
Q ss_pred eEEEecchhhcccccCCCCCce---eEEEecccccc--------ccChhh--------HHHHHHHHh-ccccCCcEEecc
Q 010913 362 MEVVQGMVEELGESMQIQPHSV---DVLVSEWMGYC--------LLYESM--------LSSVLFARD-QWLKPGGAILPD 421 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~~~f---DvIvs~~~~~~--------l~~~~~--------l~~vL~~~~-r~LkpgG~li~~ 421 (497)
++++++|+.+. ++ ++| |+|+|++.... +.|++. ...++..+. +.|+|||.+++.
T Consensus 175 v~~~~~D~~~~-----~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 175 FFVRKGEFLEP-----FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp EEEEESSTTGG-----GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred eEEEECcchhh-----cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99999999874 22 478 99999842110 002221 126888999 999999999854
No 159
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.35 E-value=1.8e-12 Score=142.16 Aligned_cols=114 Identities=18% Similarity=0.136 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCC--CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGA--SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~--~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..++.+|||||||+|.++..+++.|. .+|+|||+|+.|++.|++++...... ......+++++++|+.++
T Consensus 719 ~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnA--------kr~gl~nVefiqGDa~dL 790 (950)
T 3htx_A 719 ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNK--------EACNVKSATLYDGSILEF 790 (950)
T ss_dssp HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTT--------TCSSCSEEEEEESCTTSC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccch--------hhcCCCceEEEECchHhC
Confidence 34789999999999999999999862 59999999999999999876532100 000115899999999987
Q ss_pred ccccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEeccCce
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
. ++.++||+|++.. ++.|..+ ...++.++.++|||| .+++.+++
T Consensus 791 p----~~d~sFDlVV~~e---VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 791 D----SRLHDVDIGTCLE---VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp C----TTSCSCCEEEEES---CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred C----cccCCeeEEEEeC---chhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 4 6778999999754 4444333 456899999999999 66655443
No 160
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.35 E-value=1.8e-12 Score=143.46 Aligned_cols=113 Identities=15% Similarity=0.139 Sum_probs=93.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.+|++|||+|||||.+++.+++.|+.+|++||+|+.+++.|++++..||+. .++++++++|+.++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~------------~~~v~~i~~D~~~~l-- 603 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT------------GRAHRLIQADCLAWL-- 603 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC------------STTEEEEESCHHHHH--
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC------------ccceEEEecCHHHHH--
Confidence 468999999999999999999999988999999999999999999999982 147999999998852
Q ss_pred cCCCCCceeEEEecccccc--------ccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 376 MQIQPHSVDVLVSEWMGYC--------LLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~--------l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+...++||+|++++..+. +........++..+.++|+|||+|+++++
T Consensus 604 -~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 604 -REANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp -HHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -HhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 234578999999864322 22235667889999999999999996554
No 161
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.35 E-value=2.3e-12 Score=124.51 Aligned_cols=107 Identities=18% Similarity=0.239 Sum_probs=83.0
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHhC--------CCCCCCCCCCCCCCCCCceEEE
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDN--------DFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~-~~V~gvD~S~~~i~~A~~~~~~~--------gl~~~~~~~~~~~~~~~~i~~i 365 (497)
+.++.+|||||||+|.+++.+++.+. .+|+|||+|+.+++.|++++..+ ++ .++.++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~--------------~nv~~~ 112 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF--------------QNINVL 112 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT--------------TTEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC--------------CcEEEE
Confidence 35678999999999999999999864 48999999999999999988765 54 579999
Q ss_pred ecchhh-cccccCCCCCceeEEEeccccccccChh--------hHHHHHHHHhccccCCcEEec
Q 010913 366 QGMVEE-LGESMQIQPHSVDVLVSEWMGYCLLYES--------MLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 366 ~gd~~~-l~~~l~~~~~~fDvIvs~~~~~~l~~~~--------~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+|+.+ +.. .++.+++|.|+..... .... ....++..+.++|+|||.|++
T Consensus 113 ~~D~~~~l~~--~~~~~~~d~v~~~~p~---p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 113 RGNAMKFLPN--FFEKGQLSKMFFCFPD---PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp ECCTTSCGGG--TSCTTCEEEEEEESCC---CC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred eccHHHHHHH--hccccccCEEEEECCC---cccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 999987 321 1567889999843211 1000 014789999999999999985
No 162
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=1.9e-12 Score=127.44 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=85.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
+.++.+|||+|||+|.+++.+|+. +..+|+|+|+|+.+++.|+++++.|++ .++.++.+|+.++.
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l--------------~~~~~~~~d~~~~~ 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL--------------NNVIPILADNRDVE 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC--------------SSEEEEESCGGGCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCEEEEECChHHcC
Confidence 567899999999999999999998 466999999999999999999999987 47889999998862
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
. ..+||+|++.+.. ....++..+.+.|+|||++++
T Consensus 183 ----~-~~~~D~Vi~d~p~-------~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 183 ----L-KDVADRVIMGYVH-------KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp ----C-TTCEEEEEECCCS-------SGGGGHHHHHHHEEEEEEEEE
T ss_pred ----c-cCCceEEEECCcc-------cHHHHHHHHHHHcCCCCEEEE
Confidence 2 5689999977532 345578888899999999983
No 163
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.35 E-value=2.2e-12 Score=126.93 Aligned_cols=111 Identities=21% Similarity=0.224 Sum_probs=91.6
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
..++....+.++.+|||+|||+|.++..+++. | ..+|+++|+|+.+++.|++++..+++ .+++++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------------~~~v~~ 168 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-------------IERVTI 168 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-------------GGGEEE
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-------------CCCEEE
Confidence 34555567788999999999999999999988 5 46999999999999999999988876 247999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+.+|+.+. ++.++||+|++.+ +.+..++..+.++|+|||.+++..+
T Consensus 169 ~~~d~~~~-----~~~~~~D~V~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 169 KVRDISEG-----FDEKDVDALFLDV--------PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp ECCCGGGC-----CSCCSEEEEEECC--------SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred EECCHHHc-----ccCCccCEEEECC--------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99999875 4567899999753 2335688889999999999985443
No 164
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.35 E-value=4.4e-13 Score=129.66 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=87.6
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..++.+|++ + ..+|+|+|+++.+++.|+++++..|+ .++|+++.+|+.+..
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-------------~~~i~~~~gda~~~l 125 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-------------EHKIKLRLGPALDTL 125 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-------------TTTEEEEESCHHHHH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCcEEEEEcCHHHHH
Confidence 46789999999999999999986 2 45999999999999999999999887 358999999997753
Q ss_pred cccCC--CCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 374 ESMQI--QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 374 ~~l~~--~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..+.- ..++||+|++.. .......++..+.++|||||+|+++..
T Consensus 126 ~~~~~~~~~~~fD~V~~d~------~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 126 HSLLNEGGEHQFDFIFIDA------DKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp HHHHHHHCSSCEEEEEEES------CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHhhccCCCCEeEEEEcC------ChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 11000 147899999653 134567789999999999999996544
No 165
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.35 E-value=2.2e-12 Score=133.69 Aligned_cols=116 Identities=26% Similarity=0.271 Sum_probs=92.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||+|||+|.+++.+++.|+.+|+|+|+|+.+++.|++++..|++. ++++++.+|+.++...
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~-------------~~v~~~~~d~~~~~~~ 282 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVE-------------DRMKFIVGSAFEEMEK 282 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEESCHHHHHHH
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-------------ccceEEECCHHHHHHH
Confidence 378999999999999999999998889999999999999999999999872 3899999999876311
Q ss_pred cCCCCCceeEEEeccccccc------cChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 376 MQIQPHSVDVLVSEWMGYCL------LYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l------~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
+.....+||+|++.+..+.. ........++..+.++|+|||.++..+++
T Consensus 283 ~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 283 LQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred HHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 11125689999987643221 11145677889999999999998865553
No 166
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.35 E-value=2.4e-12 Score=121.05 Aligned_cols=105 Identities=21% Similarity=0.242 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..+..+++. + ..+|+++|+|+.+++.|++++...++ .++++++.+|+.+..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~ 121 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-------------IDRVELQVGDPLGIA 121 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-------------GGGEEEEESCHHHHH
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-------------CceEEEEEecHHHHh
Confidence 35689999999999999999987 3 45999999999999999999988776 247999999998752
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+...+ ||+|++.. .......++..+.++|||||+++++..
T Consensus 122 ---~~~~~-fD~v~~~~------~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 122 ---AGQRD-IDILFMDC------DVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ---TTCCS-EEEEEEET------TTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ---ccCCC-CCEEEEcC------ChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 23345 99999653 124567899999999999999996543
No 167
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.34 E-value=1.5e-12 Score=141.30 Aligned_cols=104 Identities=19% Similarity=0.233 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|+++..+|+.|+ .|+|||+|+.+++.|+..+..+|. -+|.+.+++++++..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~--------------~~~~~~~~~~~~~~~- 128 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPD--------------FAAEFRVGRIEEVIA- 128 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTT--------------SEEEEEECCHHHHHH-
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCC--------------CceEEEECCHHHHhh-
Confidence 4678999999999999999999999 899999999999999999988764 379999999998742
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHH--HHHHhccccCCcEEe
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSV--LFARDQWLKPGGAIL 419 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~v--L~~~~r~LkpgG~li 419 (497)
.+.+++||+|+|.. ++.|..++..+ +..+.+.|+++|..+
T Consensus 129 -~~~~~~fD~v~~~e---~~ehv~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 129 -ALEEGEFDLAIGLS---VFHHIVHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp -HCCTTSCSEEEEES---CHHHHHHHHCHHHHHHHHHHHHHHSSEE
T ss_pred -hccCCCccEEEECc---chhcCCCHHHHHHHHHHHHHhcccccee
Confidence 24578999999866 44454554433 344566777777644
No 168
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.34 E-value=4.4e-12 Score=121.90 Aligned_cols=110 Identities=16% Similarity=0.106 Sum_probs=89.8
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
.+.....+.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|+++...+++ ..++.++.+
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~~~~~~~ 147 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNL-------------GKNVKFFNV 147 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTC-------------CTTEEEECS
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC-------------CCcEEEEEc
Confidence 4445556678999999999999999999998 44999999999999999999988876 257999999
Q ss_pred chhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 368 d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
|+.+.. ++..+||+|++.. ..+..++..+.++|+|||.+++...
T Consensus 148 d~~~~~----~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 148 DFKDAE----VPEGIFHAAFVDV--------REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp CTTTSC----CCTTCBSEEEECS--------SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred Chhhcc----cCCCcccEEEECC--------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 998751 2567899999743 2345678888999999999985444
No 169
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.33 E-value=1.3e-11 Score=118.40 Aligned_cols=107 Identities=16% Similarity=0.167 Sum_probs=78.6
Q ss_pred CCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh
Q 010913 293 PSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~ 370 (497)
..+.+|.+|||+|||+|..+..+|+. | ..+|+|+|+|+.|++.+.+.++.. .++.++.+|+.
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----------------~nv~~i~~Da~ 135 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----------------PNIFPLLADAR 135 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----------------TTEEEEECCTT
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----------------CCeEEEEcccc
Confidence 34789999999999999999999987 4 469999999999876555554432 37999999987
Q ss_pred hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 371 ~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
..... ....++||+|+++.. . ......++..+.++|||||.|++.
T Consensus 136 ~~~~~-~~~~~~~D~I~~d~a---~--~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 136 FPQSY-KSVVENVDVLYVDIA---Q--PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CGGGT-TTTCCCEEEEEECCC---C--TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhh-hccccceEEEEecCC---C--hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 65311 112468999998741 1 223334455667799999999855
No 170
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.33 E-value=2.8e-12 Score=121.47 Aligned_cols=131 Identities=21% Similarity=0.235 Sum_probs=91.9
Q ss_pred CCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccC
Q 010913 298 GAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (497)
Q Consensus 298 ~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~ 377 (497)
+.+|||||||+|.++..+++. +|+|+|+.+++.|+++ ++.++.+++.++ +
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~---------------------~~~~~~~d~~~~----~ 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR---------------------GVFVLKGTAENL----P 97 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT---------------------TCEEEECBTTBC----C
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc---------------------CCEEEEcccccC----C
Confidence 889999999999999988654 9999999999988765 368889998876 4
Q ss_pred CCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCceeEEe---eecCCCCCCCccccccCccccccchH
Q 010913 378 IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATMFVA---GFGRGGTSLPFWENVYGFTMSCVGRE 454 (497)
Q Consensus 378 ~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~~~~---~~~~~~~~~~fw~~v~g~~~~~~~~~ 454 (497)
++.++||+|++.. ++.+..++..+|..+.++|+|||.+++...+.... .+........++.....+....+...
T Consensus 98 ~~~~~fD~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 174 (219)
T 1vlm_A 98 LKDESFDFALMVT---TICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDL 174 (219)
T ss_dssp SCTTCEEEEEEES---CGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHH
T ss_pred CCCCCeeEEEEcc---hHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHH
Confidence 6778999999765 55555778899999999999999998653321100 00000011112223333456667777
Q ss_pred HHhhhcC
Q 010913 455 VVQDAAG 461 (497)
Q Consensus 455 ~~~~~~~ 461 (497)
+...+|.
T Consensus 175 l~~~Gf~ 181 (219)
T 1vlm_A 175 MRKAGFE 181 (219)
T ss_dssp HHHTTCE
T ss_pred HHHCCCe
Confidence 7766654
No 171
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.33 E-value=1.5e-12 Score=126.09 Aligned_cols=123 Identities=13% Similarity=0.089 Sum_probs=83.9
Q ss_pred HHHHHHHHhCCCC--CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 010913 283 DSYRQAILENPSL--MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (497)
Q Consensus 283 ~~y~~~i~~~~~~--~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~ 359 (497)
..+...++..... .++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++++..+++ .
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-------------~ 115 (254)
T 2h00_A 49 IHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-------------S 115 (254)
T ss_dssp HHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-------------T
T ss_pred HHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC-------------C
Confidence 3344445544332 26789999999999999988876 234999999999999999999999887 2
Q ss_pred CceEEEecchhh-cccccCCC---CCceeEEEeccccccccCh------------hhHHHHHHHHhccccCCcEEec
Q 010913 360 GKMEVVQGMVEE-LGESMQIQ---PHSVDVLVSEWMGYCLLYE------------SMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 360 ~~i~~i~gd~~~-l~~~l~~~---~~~fDvIvs~~~~~~l~~~------------~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++++++++|+.+ +.. +++ .++||+|++++..+..... .....++..+.++|||||.+.+
T Consensus 116 ~~v~~~~~d~~~~~~~--~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 116 DLIKVVKVPQKTLLMD--ALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp TTEEEEECCTTCSSTT--TSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred ccEEEEEcchhhhhhh--hhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 469999999876 221 233 2689999998643221100 0112456788999999998764
No 172
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.33 E-value=2.9e-12 Score=132.84 Aligned_cols=115 Identities=22% Similarity=0.213 Sum_probs=91.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCC-CCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDF-WWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl-~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||+|||+|.+++.+++.|+.+|+|||+|+.+++.|+++++.|++ . ++++++.+|+.++..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~-------------~~v~~~~~D~~~~~~ 285 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL-------------SKAEFVRDDVFKLLR 285 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG-------------GGEEEEESCHHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-------------cceEEEECCHHHHHH
Confidence 47889999999999999999999888999999999999999999999986 3 379999999988631
Q ss_pred ccCCCCCceeEEEecccccc------ccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 375 SMQIQPHSVDVLVSEWMGYC------LLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~------l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
.+.....+||+|++.+..+. .........++..+.++|+|||+++++++
T Consensus 286 ~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 286 TYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp HHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 11111468999998764321 11124667889999999999999986554
No 173
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.33 E-value=3.3e-12 Score=125.35 Aligned_cols=112 Identities=26% Similarity=0.307 Sum_probs=91.2
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhC-C-CCCCCCCCCCCCCCCCce
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDN-D-FWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~-g-l~~~~~~~~~~~~~~~~i 362 (497)
..++....+.++.+|||+|||+|.++..+++. | ..+|+++|+++.+++.|++++..+ | + ..++
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~-------------~~~v 155 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP-------------PDNW 155 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC-------------CTTE
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-------------CCcE
Confidence 44555566788999999999999999999986 3 469999999999999999998776 4 3 1589
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
.++.+|+.+. +++.++||+|++.. ..+..++..+.++|+|||.+++..+
T Consensus 156 ~~~~~d~~~~----~~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 156 RLVVSDLADS----ELPDGSVDRAVLDM--------LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEECSCGGGC----CCCTTCEEEEEEES--------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred EEEECchHhc----CCCCCceeEEEECC--------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9999999886 35678899999743 2344688999999999999986544
No 174
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.33 E-value=5.1e-13 Score=127.78 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=77.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCC-HHHHHHH---HHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEAS-EKMAAVA---TQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S-~~~i~~A---~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~ 370 (497)
.++.+|||||||+|.++..+++. +..+|+|||+| +.|++.| ++++...++ .++.++.++++
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~--------------~~v~~~~~d~~ 88 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL--------------SNVVFVIAAAE 88 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC--------------SSEEEECCBTT
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC--------------CCeEEEEcCHH
Confidence 46789999999999999999965 33489999999 7777666 777666666 57999999998
Q ss_pred hcccccCCCCCceeEEEeccccccc-cC-hhhHHHHHHHHhccccCCcEEec
Q 010913 371 ELGESMQIQPHSVDVLVSEWMGYCL-LY-ESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 371 ~l~~~l~~~~~~fDvIvs~~~~~~l-~~-~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++.. .+ .+.+|.|++......+ .+ ......+|.++.|+|||||.+++
T Consensus 89 ~l~~--~~-~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 89 SLPF--EL-KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp BCCG--GG-TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred Hhhh--hc-cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 8731 11 2556666643210000 00 01235689999999999999986
No 175
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.33 E-value=1.8e-12 Score=125.68 Aligned_cols=108 Identities=19% Similarity=0.178 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++++|||||||+|..++.++++ + ..+|+++|+++.+++.|+++++..|+ .++|+++.+|+.+..
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-------------~~~i~~~~gda~~~l 144 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-------------DHKIDFREGPALPVL 144 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-------------GGGEEEEESCHHHHH
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCCeEEEECCHHHHH
Confidence 46789999999999999999987 3 35999999999999999999998887 258999999997752
Q ss_pred cccCC---CCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 374 ESMQI---QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 374 ~~l~~---~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
..+.. +.++||+|++.. . ......++..+.++|||||+|+++.
T Consensus 145 ~~l~~~~~~~~~fD~V~~d~---~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 145 DEMIKDEKNHGSYDFIFVDA---D---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHHHHSGGGTTCBSEEEECS---C---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HHHHhccCCCCCEEEEEEcC---c---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 10100 157899999753 1 2356778999999999999998654
No 176
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.32 E-value=5.7e-12 Score=130.34 Aligned_cols=110 Identities=16% Similarity=0.114 Sum_probs=85.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.+|.+|||+|||||.+++.+|+.|+. |+|||+|+.+++.|+++++.|++ ...+.++|+.++..
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~---------------~~~~~~~D~~~~l~- 275 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGL---------------RVDIRHGEALPTLR- 275 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTC---------------CCEEEESCHHHHHH-
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCC---------------CCcEEEccHHHHHH-
Confidence 36899999999999999999999985 99999999999999999999987 23566999987631
Q ss_pred cCCCCCceeEEEecccccccc------ChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 376 MQIQPHSVDVLVSEWMGYCLL------YESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~------~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
...+.||+|++++..+... .......++..+.++|+|||.|+..+++
T Consensus 276 --~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 276 --GLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp --TCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --HhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 2234499999876432110 0234467888899999999999855553
No 177
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.31 E-value=8.8e-12 Score=122.67 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=85.5
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCH----hHHHHHHc-C----CCEEEEEeCCHHHHHHHHHHHHh----CCCCCC-
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGI----LSLFAAQA-G----ASRVIAVEASEKMAAVATQIAKD----NDFWWD- 348 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~----ls~~la~~-G----~~~V~gvD~S~~~i~~A~~~~~~----~gl~~~- 348 (497)
....+.++.. .++.+|||+|||||. +++.+++. | ..+|+|+|+|+.|++.|++.+.. .++...
T Consensus 94 ~~l~~~llp~---~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~ 170 (274)
T 1af7_A 94 PILAEHARRR---HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQ 170 (274)
T ss_dssp HHHHHHHHHS---CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHH
T ss_pred HHHHHHccCC---CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHH
Confidence 3344444433 246799999999998 67777765 4 13899999999999999986421 000000
Q ss_pred --------CC----CCCCCCCCCCceEEEecchhhcccccCCC-CCceeEEEeccccccccChhhHHHHHHHHhccccCC
Q 010913 349 --------RP----QSEGNINNAGKMEVVQGMVEELGESMQIQ-PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG 415 (497)
Q Consensus 349 --------~~----~~~~~~~~~~~i~~i~gd~~~l~~~l~~~-~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg 415 (497)
.. ...+......+|.|.++|+.+. +++ .++||+|+|..+...+ .......++..+.++|+||
T Consensus 171 ~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~----~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pg 245 (274)
T 1af7_A 171 LQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEK----QYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPD 245 (274)
T ss_dssp HHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCS----SCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEE
T ss_pred HHHHhhccccCCCCceeechhhcccCeEEecccCCC----CCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCC
Confidence 00 0000000113699999999874 244 5789999996532222 3445689999999999999
Q ss_pred cEEecc
Q 010913 416 GAILPD 421 (497)
Q Consensus 416 G~li~~ 421 (497)
|.|++.
T Consensus 246 G~L~lg 251 (274)
T 1af7_A 246 GLLFAG 251 (274)
T ss_dssp EEEEEC
T ss_pred cEEEEE
Confidence 999853
No 178
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.31 E-value=4e-12 Score=122.41 Aligned_cols=109 Identities=12% Similarity=0.105 Sum_probs=87.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++++|||||||+|..++.++++ + ..+|+++|+++.+++.|++++...|+. ++|+++.+|+.+..
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-------------~~i~~~~gda~~~l 135 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE-------------HKINFIESDAMLAL 135 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEESCHHHHH
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CcEEEEEcCHHHHH
Confidence 46789999999999999999987 3 459999999999999999999988872 57999999987752
Q ss_pred cccC---CCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 374 ESMQ---IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 374 ~~l~---~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..+. .+.++||+|++.. .......++..+.++|+|||+++.+..
T Consensus 136 ~~l~~~~~~~~~fD~I~~d~------~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 136 DNLLQGQESEGSYDFGFVDA------DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHHHHSTTCTTCEEEEEECS------CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HHHHhccCCCCCcCEEEECC------chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 1110 0257899999653 234567889999999999999996554
No 179
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.31 E-value=3.5e-12 Score=121.32 Aligned_cols=108 Identities=19% Similarity=0.196 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..++.+++. + ..+|+++|+++.+++.|++++..+|+ .++++++.+|+.+..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-------------~~~i~~~~~d~~~~~ 134 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-------------EHKIDLRLKPALETL 134 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-------------TTTEEEEESCHHHHH
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-------------CCeEEEEEcCHHHHH
Confidence 46789999999999999999987 3 46999999999999999999998887 358999999987652
Q ss_pred cccCCC--CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 374 ESMQIQ--PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 374 ~~l~~~--~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
..++.. .++||+|++... ......++..+.++|+|||+++++.
T Consensus 135 ~~~~~~~~~~~~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 135 DELLAAGEAGTFDVAVVDAD------KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp HHHHHTTCTTCEEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHhcCCCCCccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 111111 168999997642 2345678999999999999998654
No 180
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.31 E-value=3.4e-12 Score=122.35 Aligned_cols=109 Identities=17% Similarity=0.179 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..+..+++. + ..+|+++|+++.+++.|++++..+|+ .++++++.+++.+..
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-------------~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-------------AEKISLRLGPALATL 137 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-------------GGGEEEEESCHHHHH
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCcEEEEEcCHHHHH
Confidence 45789999999999999999987 3 35999999999999999999988876 247999999986642
Q ss_pred cccCCCC--CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 374 ESMQIQP--HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 374 ~~l~~~~--~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..++... ++||+|++... ......++..+.++|+|||+|+++..
T Consensus 138 ~~l~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 138 EQLTQGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp HHHHTSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred HHHHhcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 1122223 78999996531 24567789999999999999996544
No 181
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.30 E-value=4.5e-12 Score=121.78 Aligned_cols=108 Identities=23% Similarity=0.271 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|..+..+++. + ..+|+++|+++.+++.|++++..+|+. +++.++.+|+.+..
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-------------~~v~~~~~d~~~~~ 125 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE-------------NKIFLKLGSALETL 125 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEESCHHHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-------------CCEEEEECCHHHHH
Confidence 46789999999999999999988 3 459999999999999999999988872 46999999987642
Q ss_pred ccc-----------CCCC--CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 374 ESM-----------QIQP--HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 374 ~~l-----------~~~~--~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
..+ .++. ++||+|++.. .......++..+.++|+|||+++++.
T Consensus 126 ~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~------~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 126 QVLIDSKSAPSWASDFAFGPSSIDLFFLDA------DKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHHHCSSCCGGGTTTCCSTTCEEEEEECS------CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHhhcccccccccccCCCCCcCEEEEeC------CHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 101 1222 7899999653 23456688999999999999998644
No 182
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.30 E-value=6.4e-12 Score=120.43 Aligned_cols=109 Identities=17% Similarity=0.216 Sum_probs=83.5
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 286 ~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
...++....+.++.+|||||||+|.++..+++.+..+|+|+|+++.+++.|++++...++ .++.++
T Consensus 80 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--------------~~v~~~ 145 (235)
T 1jg1_A 80 VAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV--------------KNVHVI 145 (235)
T ss_dssp HHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEE
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCcEEE
Confidence 334444446678899999999999999999998425999999999999999999988887 469999
Q ss_pred ecchhhcccccCCCC-CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 366 QGMVEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 366 ~gd~~~l~~~l~~~~-~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.+|+.. +++. .+||+|++... +.+. ...+.+.|||||++++..
T Consensus 146 ~~d~~~-----~~~~~~~fD~Ii~~~~---~~~~------~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 146 LGDGSK-----GFPPKAPYDVIIVTAG---APKI------PEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp ESCGGG-----CCGGGCCEEEEEECSB---BSSC------CHHHHHTEEEEEEEEEEE
T ss_pred ECCccc-----CCCCCCCccEEEECCc---HHHH------HHHHHHhcCCCcEEEEEE
Confidence 999832 2333 35999997652 2222 135678999999998544
No 183
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.30 E-value=8.7e-12 Score=122.82 Aligned_cols=110 Identities=15% Similarity=0.110 Sum_probs=82.7
Q ss_pred CCCEEEEEcCCC---CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 297 KGAVVMDIGCGT---GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 297 ~~~~VLDvGCGt---G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
...+|||||||+ |.++..+++. +..+|++||+|+.|++.|++++... ++++++.+|+.+.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~----------------~~v~~~~~D~~~~ 140 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD----------------PNTAVFTADVRDP 140 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC----------------TTEEEEECCTTCH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC----------------CCeEEEEeeCCCc
Confidence 447999999999 9887777665 3349999999999999999987432 4799999999764
Q ss_pred ccc-------cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 373 GES-------MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 373 ~~~-------l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
... -.++..+||+|++..+.+++... .+..+|.++.++|+|||.|++...
T Consensus 141 ~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 141 EYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hhhhccchhhccCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 210 01333589999976644333222 588999999999999999986543
No 184
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.30 E-value=2.5e-12 Score=127.98 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++++|||||||+|.++..+++. +..+|++||+++.+++.|++++...+. ......+++++.+|+....
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~---------~~~~~~rv~~~~~D~~~~l- 151 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA---------GSYDDPRFKLVIDDGVNFV- 151 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS---------SCTTCTTCCEECSCSCC---
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc---------ccccCCceEEEEChHHHHH-
Confidence 35689999999999999999998 567999999999999999998764310 0001258999999987762
Q ss_pred ccCCCCCceeEEEeccccccccChhhH--HHHHHHHhccccCCcEEeccC
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l--~~vL~~~~r~LkpgG~li~~~ 422 (497)
....++||+|++...... .....+ ..++..+.++|||||+++...
T Consensus 152 --~~~~~~fDvIi~D~~~p~-~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 152 --NQTSQTFDVIISDCTDPI-GPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ---CCCCCEEEEEECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred --hhcCCCccEEEECCCCcc-CcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 234678999998653211 111122 678999999999999999654
No 185
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.29 E-value=4.8e-12 Score=130.55 Aligned_cols=113 Identities=19% Similarity=0.229 Sum_probs=89.9
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
++.+|||+|||+|.+++.+++. +.+|+|+|+|+.+++.|++++..|++ .+++++++|+.++...+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~--------------~~~~~~~~d~~~~~~~~ 273 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGL--------------GNVRVLEANAFDLLRRL 273 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTC--------------TTEEEEESCHHHHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC--------------CCceEEECCHHHHHHHH
Confidence 7889999999999999999998 56999999999999999999999997 45999999998863111
Q ss_pred CCCCCceeEEEecccccccc------ChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 377 QIQPHSVDVLVSEWMGYCLL------YESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~------~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
.....+||+|++.+..+... .......++..+.++|+|||++++.+++
T Consensus 274 ~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 274 EKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 11256899999876432211 1144567889999999999999866553
No 186
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.29 E-value=1.4e-11 Score=116.92 Aligned_cols=107 Identities=23% Similarity=0.322 Sum_probs=81.6
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
+.++.+|||||||+|.++..+++. |. .+|+|+|+++.+++.|++++..+++. ....+++.++.+|+...
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---------~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT---------LLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTH---------HHHTSSEEEEESCGGGC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc---------ccCCCcEEEEECCcccC
Confidence 568899999999999999999987 53 49999999999999999998775420 00014799999998764
Q ss_pred ccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
. ...++||+|++... +. .++..+.++|||||++++..+
T Consensus 146 ~----~~~~~fD~i~~~~~---~~------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 146 Y----AEEAPYDAIHVGAA---AP------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp C----GGGCCEEEEEECSB---BS------SCCHHHHHTEEEEEEEEEEES
T ss_pred c----ccCCCcCEEEECCc---hH------HHHHHHHHhcCCCcEEEEEEe
Confidence 2 34568999997642 21 133567899999999986543
No 187
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.29 E-value=4.4e-11 Score=111.84 Aligned_cols=101 Identities=26% Similarity=0.232 Sum_probs=80.2
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
...++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.|++++..+++ +++++++|+.++.
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---------------~~~~~~~d~~~~~ 110 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG---------------KFKVFIGDVSEFN 110 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT---------------SEEEEESCGGGCC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC---------------CEEEEECchHHcC
Confidence 3467899999999999999999999877899999999999999999877764 6899999998752
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.+||+|++++..... .......++..+.++| ||.++
T Consensus 111 -------~~~D~v~~~~p~~~~-~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 111 -------SRVDIVIMNPPFGSQ-RKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp -------CCCSEEEECCCCSSS-STTTTHHHHHHHHHHC--SEEEE
T ss_pred -------CCCCEEEEcCCCccc-cCCchHHHHHHHHHhc--CcEEE
Confidence 489999998643222 2233456778888887 55544
No 188
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.29 E-value=2.5e-11 Score=124.53 Aligned_cols=113 Identities=21% Similarity=0.192 Sum_probs=90.9
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 286 ~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
...+.......++.+|||||||+|.++..+++. +..+++++|+ +.+++.|++++...++ .++|++
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l-------------~~~v~~ 256 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL-------------ADRCEI 256 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-------------TTTEEE
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc-------------CCceEE
Confidence 344555556677899999999999999999988 3449999999 9999999999988877 368999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhH--HHHHHHHhccccCCcEEecc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l--~~vL~~~~r~LkpgG~li~~ 421 (497)
+.+|+.+ +++. +||+|++.. ++++..+. ..+|.++.++|+|||.|++.
T Consensus 257 ~~~d~~~-----~~p~-~~D~v~~~~---vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 257 LPGDFFE-----TIPD-GADVYLIKH---VLHDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp EECCTTT-----CCCS-SCSEEEEES---CGGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred eccCCCC-----CCCC-CceEEEhhh---hhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999973 2444 899999655 44444443 47999999999999999843
No 189
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.29 E-value=5.1e-12 Score=125.91 Aligned_cols=114 Identities=18% Similarity=0.093 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~--~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++.+|||||||+|.++..+++. +..+|++||+++.+++.|++++.. +++. .++++++.+|+.+.
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~------------~~~v~~~~~D~~~~ 156 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD------------DPRAEIVIANGAEY 156 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG------------CTTEEEEESCHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC------------CCceEEEECcHHHH
Confidence 35689999999999999999998 667999999999999999998754 2221 25899999999875
Q ss_pred ccccCCCCCceeEEEeccccccccChh--hHHHHHHHHhccccCCcEEeccCce
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYES--MLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~--~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
. +...++||+|++........... ....++..+.++|||||+++...++
T Consensus 157 l---~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 157 V---RKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp G---GGCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred H---hhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 2 23467899999864221011111 1267889999999999999966543
No 190
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.28 E-value=8.5e-13 Score=132.04 Aligned_cols=146 Identities=18% Similarity=0.213 Sum_probs=91.9
Q ss_pred hHHHhhhccccccccccchhHHh-------hhc------chhhhHHHH-HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHH
Q 010913 252 AKDIKKVNESYFGSYSSFGIHRE-------MIS------DKVRTDSYR-QAILENPSLMKGAVVMDIGCGTGILSLFAAQ 317 (497)
Q Consensus 252 ~~~~~~~~~~Yf~~y~~~~ih~~-------ml~------d~~r~~~y~-~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~ 317 (497)
+.+....+..||.+|...++++. |+. +.+....|. ..+.....+.++.+|||||||+|.++..+++
T Consensus 23 k~~l~~~~~~~f~~y~~~~i~e~~~~~a~~~l~~g~~~~~~~sR~a~KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~ 102 (305)
T 2p41_A 23 KSRLNALGKSEFQIYKKSGIQEVDRTLAKEGIKRGETDHHAVSRGSAKLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGG 102 (305)
T ss_dssp HHHHHHSCHHHHHHHHHTTCEEEECHHHHHHHHTTCCSSCCSSTHHHHHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHT
T ss_pred HHHHhHhhHHHHHHhcccCccccCHHHHHHHHHcCCCcCCccccHHHHHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHh
Confidence 33344445668888887766552 342 222233332 2233444456789999999999999999999
Q ss_pred cCCCEEEEEeC----CHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec-chhhcccccCCCCCceeEEEecccc
Q 010913 318 AGASRVIAVEA----SEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-MVEELGESMQIQPHSVDVLVSEWMG 392 (497)
Q Consensus 318 ~G~~~V~gvD~----S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g-d~~~l~~~l~~~~~~fDvIvs~~~~ 392 (497)
. .+|+|||+ ++.+++.+. ....+ .+++.++++ |+..+ +..+||+|+|.++.
T Consensus 103 ~--~~V~gvD~~~~~~~~~~~~~~--~~~~~--------------~~~v~~~~~~D~~~l------~~~~fD~V~sd~~~ 158 (305)
T 2p41_A 103 L--KNVREVKGLTKGGPGHEEPIP--MSTYG--------------WNLVRLQSGVDVFFI------PPERCDTLLCDIGE 158 (305)
T ss_dssp S--TTEEEEEEECCCSTTSCCCCC--CCSTT--------------GGGEEEECSCCTTTS------CCCCCSEEEECCCC
T ss_pred c--CCEEEEeccccCchhHHHHHH--hhhcC--------------CCCeEEEeccccccC------CcCCCCEEEECCcc
Confidence 8 37999999 553331100 00011 147899999 87764 35689999997643
Q ss_pred ccccChhhH---HHHHHHHhccccCCcEEecc
Q 010913 393 YCLLYESML---SSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 393 ~~l~~~~~l---~~vL~~~~r~LkpgG~li~~ 421 (497)
....+..+. ..+|..+.++|||||.+++.
T Consensus 159 ~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 159 SSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 211111111 15788889999999999854
No 191
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.28 E-value=1.9e-11 Score=125.14 Aligned_cols=113 Identities=24% Similarity=0.211 Sum_probs=89.7
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
+.++....+.++.+|||||||+|.++..+++.. ..+++++|+ +.+++.|++++..+++ .++|+++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-------------~~~v~~~ 237 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL-------------ADRVTVA 237 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-------------TTTEEEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC-------------CCceEEE
Confidence 345555566788999999999999999999883 349999999 9999999999988887 3589999
Q ss_pred ecchhhcccccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEeccC
Q 010913 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 366 ~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.+|+.+. ++. .||+|++.. ++++..+ ...+|..+.++|||||.+++..
T Consensus 238 ~~d~~~~-----~~~-~~D~v~~~~---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 238 EGDFFKP-----LPV-TADVVLLSF---VLLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp ECCTTSC-----CSC-CEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCCCc-----CCC-CCCEEEEec---cccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9998752 333 499999765 4444333 3589999999999999887543
No 192
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.28 E-value=2.2e-11 Score=124.29 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=89.3
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
+.++......++.+|||||||+|.++..+++. +..+|+++|+ +.+++.|++++...++ .++++++
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-------------~~~v~~~ 245 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV-------------ADRMRGI 245 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-------------TTTEEEE
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC-------------CCCEEEE
Confidence 34555555677899999999999999999988 3349999999 9999999999988876 3579999
Q ss_pred ecchhhcccccCCCCCceeEEEeccccccccChh--hHHHHHHHHhccccCCcEEec
Q 010913 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYES--MLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 366 ~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~--~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+|+.+. +++. +|+|++.. ++++.. ....+|.++.++|||||.+++
T Consensus 246 ~~d~~~~----~~~~--~D~v~~~~---vlh~~~d~~~~~~l~~~~~~L~pgG~l~i 293 (359)
T 1x19_A 246 AVDIYKE----SYPE--ADAVLFCR---ILYSANEQLSTIMCKKAFDAMRSGGRLLI 293 (359)
T ss_dssp ECCTTTS----CCCC--CSEEEEES---CGGGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred eCccccC----CCCC--CCEEEEec---hhccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9999875 2433 39999654 444433 378899999999999999974
No 193
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.28 E-value=1.3e-11 Score=124.44 Aligned_cols=110 Identities=19% Similarity=0.130 Sum_probs=88.6
Q ss_pred HHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
+.......++.+|||||||+|.++..+++. +..+++++|+ +.+++.|++++...++ .++|+++.+
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-------------~~~v~~~~~ 226 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL-------------SGRAQVVVG 226 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-------------TTTEEEEEC
T ss_pred HHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc-------------CcCeEEecC
Confidence 334444556789999999999999999887 4458999999 9999999999988877 368999999
Q ss_pred chhhcccccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEecc
Q 010913 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 368 d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~ 421 (497)
|+.+ +++. +||+|++.. ++++..+ ...+|.++.++|+|||.|++.
T Consensus 227 d~~~-----~~p~-~~D~v~~~~---vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 227 SFFD-----PLPA-GAGGYVLSA---VLHDWDDLSAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp CTTS-----CCCC-SCSEEEEES---CGGGSCHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCC-----CCCC-CCcEEEEeh---hhccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9973 2444 899999655 4444444 588999999999999999854
No 194
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.28 E-value=4e-12 Score=125.66 Aligned_cols=116 Identities=17% Similarity=0.080 Sum_probs=83.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhC--CCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN--DFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~--gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++.+|||||||+|.++..++++|..+|++||+++.+++.|++++ .. ++. ....+...++++++.+|+.+..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~-----~~~~~~~~~~v~~~~~D~~~~l 147 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLL-----EAMLNGKHEKAKLTIGDGFEFI 147 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHH-----HHHHTTCCSSEEEEESCHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccc-----cccccCCCCcEEEEECchHHHh
Confidence 457899999999999999999887679999999999999999987 32 210 0000001358999999987752
Q ss_pred cccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEeccC
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+. .++||+|++...... ..... ...++..+.++|+|||+++...
T Consensus 148 ---~~-~~~fD~Ii~d~~~~~-~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 148 ---KN-NRGFDVIIADSTDPV-GPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp ---HH-CCCEEEEEEECCCCC------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cc-cCCeeEEEECCCCCC-CcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 22 578999998653211 11111 2678899999999999999654
No 195
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.27 E-value=1.2e-11 Score=125.81 Aligned_cols=113 Identities=18% Similarity=0.256 Sum_probs=90.9
Q ss_pred HHHhCCCCCC-CCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 288 AILENPSLMK-GAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 288 ~i~~~~~~~~-~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
.++......+ +.+|||||||+|.++..+++. +..+++++|+ +.+++.|++++...++ .++++++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-------------~~~v~~~ 234 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL-------------GGRVEFF 234 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-------------GGGEEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC-------------CCceEEE
Confidence 4555556666 899999999999999999987 4459999999 7799999999988876 3589999
Q ss_pred ecchhhcccccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEec
Q 010913 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 366 ~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+|+.+.. ++.++.||+|++.. ++++. .....+|..+.++|||||.+++
T Consensus 235 ~~d~~~~~---~~~~~~~D~v~~~~---vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 235 EKNLLDAR---NFEGGAADVVMLND---CLHYFDAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp ECCTTCGG---GGTTCCEEEEEEES---CGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred eCCcccCc---ccCCCCccEEEEec---ccccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 99998753 12456799999755 44433 3458899999999999999984
No 196
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.27 E-value=7.2e-12 Score=123.97 Aligned_cols=99 Identities=18% Similarity=0.201 Sum_probs=73.0
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE-Eecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV-VQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~-i~gd~~~l~~ 374 (497)
.+|.+|||||||||.++..+++.|+.+|+|||+|+.|++.+.+. + .++.. ...++..+..
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~----------------~rv~~~~~~ni~~l~~ 144 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D----------------DRVRSMEQYNFRYAEP 144 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C----------------TTEEEECSCCGGGCCG
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C----------------cccceecccCceecch
Confidence 46889999999999999999999988999999999999875432 1 23333 3345544421
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
..++..+||+|++... +. .+..+|.++.++|||||.+++
T Consensus 145 -~~l~~~~fD~v~~d~s---f~---sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 145 -VDFTEGLPSFASIDVS---FI---SLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp -GGCTTCCCSEEEECCS---SS---CGGGTHHHHHHHSCTTCEEEE
T ss_pred -hhCCCCCCCEEEEEee---Hh---hHHHHHHHHHHHcCcCCEEEE
Confidence 0134456999997642 22 237789999999999999984
No 197
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.27 E-value=9e-12 Score=126.03 Aligned_cols=114 Identities=23% Similarity=0.289 Sum_probs=83.6
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHhC-------CCCCCCCCCCCCCCC
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDN-------DFWWDRPQSEGNINN 358 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~-~~V~gvD~S~~~i~~A~~~~~~~-------gl~~~~~~~~~~~~~ 358 (497)
.++..+.+.++.+|||+|||+|.++..+++. |. .+|+|+|+++.+++.|++++... ++. ..
T Consensus 96 ~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~----------~~ 165 (336)
T 2b25_A 96 MILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE----------EW 165 (336)
T ss_dssp HHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS----------CC
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc----------cc
Confidence 3444446678999999999999999999997 65 69999999999999999998752 220 00
Q ss_pred CCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 359 AGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 359 ~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
..+++++.+|+.+... +++.++||+|++... .+..++..+.++|||||.+++.
T Consensus 166 ~~~v~~~~~d~~~~~~--~~~~~~fD~V~~~~~--------~~~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 166 PDNVDFIHKDISGATE--DIKSLTFDAVALDML--------NPHVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp CCCEEEEESCTTCCC---------EEEEEECSS--------STTTTHHHHGGGEEEEEEEEEE
T ss_pred CCceEEEECChHHccc--ccCCCCeeEEEECCC--------CHHHHHHHHHHhcCCCcEEEEE
Confidence 2579999999987521 245678999997542 1123788899999999999843
No 198
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.27 E-value=1.1e-11 Score=117.84 Aligned_cols=111 Identities=15% Similarity=0.167 Sum_probs=81.8
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCC------CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGA------SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~------~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
.+.++.+|||||||+|.++..+++.+. .+|+|+|+++.+++.|++++..+++. .....+++++.+
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---------~~~~~~v~~~~~ 147 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPE---------LLKIDNFKIIHK 147 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGG---------GGSSTTEEEEEC
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcc---------ccccCCEEEEEC
Confidence 456789999999999999999998742 49999999999999999998877620 000147999999
Q ss_pred chhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 368 d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
|+...........++||+|++... +.+ ++..+.++|||||++++..
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~---~~~------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGAS---ASE------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSB---BSS------CCHHHHHHEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCc---hHH------HHHHHHHhcCCCcEEEEEE
Confidence 987741000023568999997652 221 3467789999999998543
No 199
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.27 E-value=1.4e-11 Score=124.02 Aligned_cols=111 Identities=17% Similarity=0.190 Sum_probs=88.1
Q ss_pred HHHhCCCC--CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 288 AILENPSL--MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 288 ~i~~~~~~--~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
.++..... .++.+|||||||+|.++..+++. +..+|+++|+| .+++.|++++...++ .+++++
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~-------------~~~v~~ 219 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV-------------ASRYHT 219 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC-------------GGGEEE
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC-------------CcceEE
Confidence 33333344 67889999999999999999988 33499999999 999999999888776 247999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEec
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+.+|+.+.. ++. .||+|++.. ++++. .....+|..+.++|+|||.+++
T Consensus 220 ~~~d~~~~~----~~~-~~D~v~~~~---~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 269 (335)
T 2r3s_A 220 IAGSAFEVD----YGN-DYDLVLLPN---FLHHFDVATCEQLLRKIKTALAVEGKVIV 269 (335)
T ss_dssp EESCTTTSC----CCS-CEEEEEEES---CGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EecccccCC----CCC-CCcEEEEcc---hhccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 999998752 433 499999754 44433 4567899999999999998874
No 200
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.27 E-value=9.2e-12 Score=122.71 Aligned_cols=113 Identities=12% Similarity=0.035 Sum_probs=86.0
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~--~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++|||||||+|.++..+++. |..+|++||+++.+++.|++++.. +++. .++++++.+|+.+.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~------------~~rv~v~~~D~~~~ 141 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLD------------DPRVDVQVDDGFMH 141 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTT------------STTEEEEESCSHHH
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccC------------CCceEEEECcHHHH
Confidence 35789999999999999999998 777999999999999999998753 2331 26899999998875
Q ss_pred ccccCCCCCceeEEEeccccccccChh-hHHHHHHHHhccccCCcEEeccCc
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYES-MLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~-~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
- +...++||+|++........... ....++..+.++|+|||+++....
T Consensus 142 l---~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 142 I---AKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp H---HTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred H---hhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 2 23457899999875321110000 125688999999999999996643
No 201
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.26 E-value=1e-11 Score=118.28 Aligned_cols=101 Identities=19% Similarity=0.273 Sum_probs=80.0
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc-CC------CEEEEEeCCHHHHHHHHHHHHhCC-----CCCCCCCCCCCCCCCCc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA-GA------SRVIAVEASEKMAAVATQIAKDND-----FWWDRPQSEGNINNAGK 361 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~-G~------~~V~gvD~S~~~i~~A~~~~~~~g-----l~~~~~~~~~~~~~~~~ 361 (497)
.+.++.+|||||||+|.++..+++. |. .+|+|+|+++.+++.|++++...+ . .+
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~--------------~~ 146 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS--------------GQ 146 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH--------------TS
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC--------------Cc
Confidence 3567899999999999999999985 53 599999999999999999887654 3 47
Q ss_pred eEEEecchhhcccccCCCC-CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 362 MEVVQGMVEELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~-~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.++.+|+... ++. ++||+|++... +.+ ++..+.+.|||||++++..
T Consensus 147 v~~~~~d~~~~-----~~~~~~fD~I~~~~~---~~~------~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 147 LLIVEGDGRKG-----YPPNAPYNAIHVGAA---APD------TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp EEEEESCGGGC-----CGGGCSEEEEEECSC---BSS------CCHHHHHTEEEEEEEEEEE
T ss_pred eEEEECCcccC-----CCcCCCccEEEECCc---hHH------HHHHHHHHhcCCCEEEEEE
Confidence 99999998873 333 78999997653 222 2266789999999998543
No 202
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.26 E-value=2e-11 Score=124.89 Aligned_cols=105 Identities=13% Similarity=0.069 Sum_probs=84.9
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
..+.+|||||||+|.++..+++. +..+|+++|+ +.+++.|++++...++ .++|+++.+|+.+..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-------------~~~v~~~~~d~~~~~- 242 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG-------------SERIHGHGANLLDRD- 242 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT-------------GGGEEEEECCCCSSS-
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc-------------ccceEEEEccccccC-
Confidence 35689999999999999999986 3449999999 9999999999887776 358999999998741
Q ss_pred ccCCCCCceeEEEeccccccccC--hhhHHHHHHHHhccccCCcEEec
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLY--ESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~--~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+|++ ++||+|++.. ++++ ......+|.++.++|||||.|++
T Consensus 243 -~~~p-~~~D~v~~~~---vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (363)
T 3dp7_A 243 -VPFP-TGFDAVWMSQ---FLDCFSEEEVISILTRVAQSIGKDSKVYI 285 (363)
T ss_dssp -CCCC-CCCSEEEEES---CSTTSCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred -CCCC-CCcCEEEEec---hhhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 1244 7899999655 4443 34456889999999999999974
No 203
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.26 E-value=9.7e-12 Score=125.87 Aligned_cols=113 Identities=16% Similarity=0.149 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhC--CCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDN--DFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~--gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++|||||||+|.++..+++. +..+|++||+|+.+++.|++++... ++. ..+++++.+|+.++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~------------~~rv~~~~~D~~~~ 186 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE------------DPRVNLVIGDGVAF 186 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG------------STTEEEEESCHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC------------CCcEEEEECCHHHH
Confidence 46789999999999999999988 4569999999999999999987542 331 25899999999875
Q ss_pred ccccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEeccCc
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
.. ..+.++||+|++..... ...... ...++..+.++|+|||+|++...
T Consensus 187 l~--~~~~~~fDlIi~d~~~p-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 187 LK--NAAEGSYDAVIVDSSDP-IGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp HH--TSCTTCEEEEEECCCCT-TSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred HH--hccCCCccEEEECCCCc-cCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 21 13457899999865321 111111 36789999999999999997543
No 204
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.26 E-value=1.2e-11 Score=125.38 Aligned_cols=99 Identities=17% Similarity=0.186 Sum_probs=83.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.+|.+|||+|||+|.+++. ++ |+.+|+|+|+|+.+++.|+++++.|++ .++++++++|+.++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l-------------~~~v~~~~~D~~~~--- 255 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKL-------------EHKIIPILSDVREV--- 255 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTC-------------TTTEEEEESCGGGC---
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCC-------------CCcEEEEECChHHh---
Confidence 4789999999999999999 87 677999999999999999999999987 25799999999885
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
. .+||+|++++..+. ..++..+.++|+|||.++...+
T Consensus 256 --~--~~fD~Vi~dpP~~~-------~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 256 --D--VKGNRVIMNLPKFA-------HKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp --C--CCEEEEEECCTTTG-------GGGHHHHHHHEEEEEEEEEEEE
T ss_pred --c--CCCcEEEECCcHhH-------HHHHHHHHHHcCCCCEEEEEEe
Confidence 2 78999998753221 2677888899999999885433
No 205
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.26 E-value=9.3e-12 Score=130.75 Aligned_cols=115 Identities=19% Similarity=0.121 Sum_probs=91.4
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
...+|.+|||+|||+|..+..+|+. +..+|+|+|+++.+++.++++++.+|+ .++.++++|+..
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~--------------~nv~v~~~Da~~ 167 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV--------------SNAIVTNHAPAE 167 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC--------------SSEEEECCCHHH
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CceEEEeCCHHH
Confidence 4578899999999999999999986 446999999999999999999999987 479999999988
Q ss_pred cccccCCCCCceeEEEeccc----cccccCh---------------hhHHHHHHHHhccccCCcEEeccCcee
Q 010913 372 LGESMQIQPHSVDVLVSEWM----GYCLLYE---------------SMLSSVLFARDQWLKPGGAILPDTATM 425 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~----~~~l~~~---------------~~l~~vL~~~~r~LkpgG~li~~~~~~ 425 (497)
+. ...+++||+|+++.. +..-.+. .....+|..+.++|||||+|+.++|++
T Consensus 168 l~---~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 168 LV---PHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HH---HHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hh---hhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 74 123578999998642 1111111 112378899999999999999888876
No 206
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.25 E-value=8.4e-12 Score=131.26 Aligned_cols=114 Identities=18% Similarity=0.164 Sum_probs=90.5
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
...+|.+|||+|||+|..+..+|+. +..+|+|+|+|+.+++.++++++.+|+ . +.++++|+.+
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~--------------~-v~~~~~Da~~ 162 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA--------------P-LAVTQAPPRA 162 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC--------------C-CEEECSCHHH
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------e-EEEEECCHHH
Confidence 4568899999999999999999976 336999999999999999999999987 4 8999999988
Q ss_pred cccccCCCCCceeEEEeccc----cccccCh---------------hhHHHHHHHHhccccCCcEEeccCcee
Q 010913 372 LGESMQIQPHSVDVLVSEWM----GYCLLYE---------------SMLSSVLFARDQWLKPGGAILPDTATM 425 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~----~~~l~~~---------------~~l~~vL~~~~r~LkpgG~li~~~~~~ 425 (497)
+. ....++||+|+++.. +..-... .....+|..+.++|||||+|+.++|++
T Consensus 163 l~---~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 163 LA---EAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HH---HHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred hh---hhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 74 123578999996432 1111010 112678999999999999999888876
No 207
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=9.3e-12 Score=121.42 Aligned_cols=93 Identities=20% Similarity=0.309 Sum_probs=76.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+++. .++.++.+++.++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------------------~~~~~~~~d~~~~-- 142 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------------------PQVTFCVASSHRL-- 142 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-------------------TTSEEEECCTTSC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-------------------CCcEEEEcchhhC--
Confidence 46789999999999999999997 2349999999999999988763 3678999999876
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+++.++||+|++... ..++.++.++|||||.+++.
T Consensus 143 --~~~~~~fD~v~~~~~----------~~~l~~~~~~L~pgG~l~~~ 177 (269)
T 1p91_A 143 --PFSDTSMDAIIRIYA----------PCKAEELARVVKPGGWVITA 177 (269)
T ss_dssp --SBCTTCEEEEEEESC----------CCCHHHHHHHEEEEEEEEEE
T ss_pred --CCCCCceeEEEEeCC----------hhhHHHHHHhcCCCcEEEEE
Confidence 467789999997532 12578889999999999854
No 208
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.25 E-value=7.4e-12 Score=126.12 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=84.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~--~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++.+|||||||+|.++..+++. +..+|++||+|+.+++.|++++.. +++ ..++++++.+|+.+.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~------------~~~~v~~~~~D~~~~ 182 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY------------EDKRVNVFIEDASKF 182 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG------------GSTTEEEEESCHHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc------------CCCcEEEEEccHHHH
Confidence 35689999999999999999988 567999999999999999998754 222 125899999998775
Q ss_pred ccccCCCCCceeEEEeccccccccChhhH--HHHHHHHhccccCCcEEeccC
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~l--~~vL~~~~r~LkpgG~li~~~ 422 (497)
. +...++||+|+++.... +.....+ ..++..+.++|||||+++...
T Consensus 183 l---~~~~~~fDvIi~d~~~p-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 183 L---ENVTNTYDVIIVDSSDP-IGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp H---HHCCSCEEEEEEECCCS-SSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred H---hhcCCCceEEEECCcCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 2 22357899999864211 1111122 678999999999999999653
No 209
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.25 E-value=1.3e-12 Score=128.85 Aligned_cols=112 Identities=19% Similarity=0.202 Sum_probs=76.8
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE-
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV- 365 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i- 365 (497)
..+.....+.++.+|||||||+|.++..+++. .+|+|||+|+ |+..|++ .... ......++.++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~----~~~~--------~~~~~~~v~~~~ 136 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHE----KPRL--------VETFGWNLITFK 136 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSC----CCCC--------CCCTTGGGEEEE
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhh----chhh--------hhhcCCCeEEEe
Confidence 44445545568899999999999999999998 4899999998 5432221 1110 00001278999
Q ss_pred -ecchhhcccccCCCCCceeEEEeccccccccCh-hh-H--HHHHHHHhccccCCc--EEec
Q 010913 366 -QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE-SM-L--SSVLFARDQWLKPGG--AILP 420 (497)
Q Consensus 366 -~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~-~~-l--~~vL~~~~r~LkpgG--~li~ 420 (497)
++|+.++ ++++||+|+|... ...... .+ . ..+|..+.++||||| .+++
T Consensus 137 ~~~D~~~l------~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 137 SKVDVTKM------EPFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp CSCCGGGC------CCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ccCcHhhC------CCCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 9999875 3678999999854 222221 11 1 137888999999999 8774
No 210
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.24 E-value=1.7e-11 Score=121.32 Aligned_cols=114 Identities=14% Similarity=0.089 Sum_probs=86.0
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++++|||||||+|.++..+++. +..+|++||+++.+++.|++++...+- ....++++++.+|+.+..
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~----------~~~~~~v~~~~~D~~~~l- 145 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC----------GYEDKRVNVFIEDASKFL- 145 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSG----------GGGSTTEEEEESCHHHHH-
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhcc----------ccCCCcEEEEECChHHHH-
Confidence 46789999999999999999988 457999999999999999998754320 011268999999998752
Q ss_pred ccCCCCCceeEEEeccccccccChhhH--HHHHHHHhccccCCcEEeccCc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l--~~vL~~~~r~LkpgG~li~~~~ 423 (497)
+...++||+|++..... ......+ ..++..+.++|+|||+++....
T Consensus 146 --~~~~~~fD~Ii~d~~~~-~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 146 --ENVTNTYDVIIVDSSDP-IGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp --HHCCSCEEEEEEECCCT-TTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred --HhCCCCceEEEEcCCCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 22367899999864221 1112222 6899999999999999996644
No 211
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.24 E-value=9.5e-12 Score=124.39 Aligned_cols=112 Identities=17% Similarity=0.121 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~--~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++|||||||+|.++..++++ +..+|++||+++.+++.|++++.. +++. .++++++.+|+.+.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~------------~~rv~v~~~Da~~~ 161 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS------------SSKLTLHVGDGFEF 161 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG------------CTTEEEEESCHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC------------CCcEEEEECcHHHH
Confidence 46789999999999999999988 457999999999999999998754 2321 25899999999875
Q ss_pred ccccCCCCCceeEEEeccccccccCh-hhHHHHHHHHhccccCCcEEeccC
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYE-SMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~-~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
. +...++||+|++.......... -....++..+.++|+|||+++...
T Consensus 162 l---~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 162 M---KQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp H---HTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred H---hhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 2 2346789999986432111000 012468899999999999999654
No 212
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.24 E-value=7e-12 Score=114.32 Aligned_cols=94 Identities=16% Similarity=0.088 Sum_probs=72.6
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. . .+++++++|+.+.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~---------~--------------~~~~~~~~d~~~~--- 73 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES---------H--------------RGGNLVRADLLCS--- 73 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT---------C--------------SSSCEEECSTTTT---
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc---------c--------------cCCeEEECChhhh---
Confidence 467799999999999999999988 99999999999975 1 3688999999873
Q ss_pred cCCCCCceeEEEecccccccc------ChhhHHHHHHHHhccccCCcEEec
Q 010913 376 MQIQPHSVDVLVSEWMGYCLL------YESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~------~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++.++||+|++++..+... .......++..+.+.| |||.+++
T Consensus 74 --~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~ 121 (170)
T 3q87_B 74 --INQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYL 121 (170)
T ss_dssp --BCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEE
T ss_pred --cccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEE
Confidence 4568999999975322110 1112345777777778 9999984
No 213
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.24 E-value=7.2e-12 Score=125.77 Aligned_cols=111 Identities=19% Similarity=0.147 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhC--CCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDN--DFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~--gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++|||||||+|.++..+++. +..+|++||+++.+++.|++++... ++ ..++++++.+|+.+.
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~------------~~~rv~~~~~D~~~~ 174 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGF------------SHPKLDLFCGDGFEF 174 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGG------------GCTTEEEECSCHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcccc------------CCCCEEEEEChHHHH
Confidence 35689999999999999999988 4569999999999999999987543 22 136899999999875
Q ss_pred ccccCCCCCceeEEEeccccccccChhhH--HHHHHHHhccccCCcEEeccC
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~l--~~vL~~~~r~LkpgG~li~~~ 422 (497)
. +...++||+|++..... +.....+ ..++..+.++|+|||+++...
T Consensus 175 l---~~~~~~fD~Ii~d~~~~-~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 175 L---KNHKNEFDVIITDSSDP-VGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp H---HHCTTCEEEEEECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred H---HhcCCCceEEEEcCCCC-CCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 2 22467899999865321 1111122 678999999999999999654
No 214
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.24 E-value=8.9e-13 Score=129.29 Aligned_cols=112 Identities=16% Similarity=0.128 Sum_probs=75.8
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE-
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV- 365 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i- 365 (497)
..+.....+.++.+|||||||+|.++..+++. .+|+|||+++ |+..+++ .... ......++.++
T Consensus 64 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~----~~~~--------~~~~~~~v~~~~ 128 (265)
T 2oxt_A 64 AWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHE----VPRI--------TESYGWNIVKFK 128 (265)
T ss_dssp HHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCC----CCCC--------CCBTTGGGEEEE
T ss_pred HHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhh----hhhh--------hhccCCCeEEEe
Confidence 33444444567899999999999999999988 4899999998 5322211 1110 00001268999
Q ss_pred -ecchhhcccccCCCCCceeEEEeccccccccCh-hh-H--HHHHHHHhccccCCc--EEec
Q 010913 366 -QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE-SM-L--SSVLFARDQWLKPGG--AILP 420 (497)
Q Consensus 366 -~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~-~~-l--~~vL~~~~r~LkpgG--~li~ 420 (497)
++|+.++ ++++||+|+|... ...... .+ . ..+|..+.++||||| .+++
T Consensus 129 ~~~D~~~l------~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 129 SRVDIHTL------PVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp CSCCTTTS------CCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cccCHhHC------CCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 8999875 3678999999854 222221 11 1 137888999999999 8774
No 215
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=1.2e-11 Score=123.78 Aligned_cols=108 Identities=17% Similarity=0.235 Sum_probs=82.0
Q ss_pred CEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccC
Q 010913 299 AVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (497)
Q Consensus 299 ~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~ 377 (497)
.+|||||||+|.++..+++. +..+|++||+++.+++.|++++.... ..+++++.+|+.++.. .
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~--------------~~rv~v~~~Da~~~l~--~ 154 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR--------------APRVKIRVDDARMVAE--S 154 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC--------------TTTEEEEESCHHHHHH--T
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC--------------CCceEEEECcHHHHHh--h
Confidence 49999999999999999994 44499999999999999999864332 2689999999987631 2
Q ss_pred CCCCceeEEEeccccccccChh-hHHHHHHHHhccccCCcEEeccC
Q 010913 378 IQPHSVDVLVSEWMGYCLLYES-MLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 378 ~~~~~fDvIvs~~~~~~l~~~~-~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
++.++||+|++........... ....++..+.++|+|||+++...
T Consensus 155 ~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 155 FTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp CCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 3467899999864322111111 12678999999999999998543
No 216
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.23 E-value=1.7e-11 Score=121.39 Aligned_cols=87 Identities=22% Similarity=0.337 Sum_probs=72.7
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
...+.|.....+.++.+|||||||+|.++..+++.|. +|+|||+|+.+++.|++++..+++ .++++
T Consensus 15 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-------------~~~v~ 80 (285)
T 1zq9_A 15 LIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPV-------------ASKLQ 80 (285)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTT-------------GGGEE
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCC-------------CCceE
Confidence 4555666666777899999999999999999999976 999999999999999999876654 24799
Q ss_pred EEecchhhcccccCCCCCceeEEEecc
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEW 390 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~ 390 (497)
++.+|+.++. ++ +||+|+++.
T Consensus 81 ~~~~D~~~~~----~~--~fD~vv~nl 101 (285)
T 1zq9_A 81 VLVGDVLKTD----LP--FFDTCVANL 101 (285)
T ss_dssp EEESCTTTSC----CC--CCSEEEEEC
T ss_pred EEEcceeccc----ch--hhcEEEEec
Confidence 9999998763 33 799999874
No 217
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.23 E-value=3.3e-11 Score=123.90 Aligned_cols=99 Identities=12% Similarity=0.181 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh-cc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE-LG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~-l~ 373 (497)
.++.+|||+| |+|.+++.+++.|. .+|+|+|+|+.+++.|+++++.+|+ .+++++.+|+.+ +
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~--------------~~v~~~~~D~~~~l- 234 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY--------------EDIEIFTFDLRKPL- 234 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC--------------CCEEEECCCTTSCC-
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CCEEEEEChhhhhc-
Confidence 4689999999 99999999999875 7999999999999999999998887 489999999987 4
Q ss_pred cccCC-CCCceeEEEeccccccccChhhHHHHHHHHhccccCCcE
Q 010913 374 ESMQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGA 417 (497)
Q Consensus 374 ~~l~~-~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~ 417 (497)
+. ..++||+|+++++. . ......++..+.++|||||.
T Consensus 235 ---~~~~~~~fD~Vi~~~p~-~---~~~~~~~l~~~~~~LkpgG~ 272 (373)
T 2qm3_A 235 ---PDYALHKFDTFITDPPE-T---LEAIRAFVGRGIATLKGPRC 272 (373)
T ss_dssp ---CTTTSSCBSEEEECCCS-S---HHHHHHHHHHHHHTBCSTTC
T ss_pred ---hhhccCCccEEEECCCC-c---hHHHHHHHHHHHHHcccCCe
Confidence 22 24689999987531 1 11357899999999999994
No 218
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.23 E-value=1.8e-11 Score=122.98 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh--CC-CCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--ND-FWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~--~g-l~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
.++++|||||||+|.++..+++. +..+|++||+++.+++.|++++.. .+ +. .++++++.+|+.+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~------------~~~v~~~~~D~~~ 143 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD------------DPRAVLVIDDARA 143 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG------------CTTEEEEESCHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc------------CCceEEEEchHHH
Confidence 35689999999999999999988 566999999999999999998754 22 11 2589999999987
Q ss_pred cccccCCCCCceeEEEecccccc-c-cChhh--HHHHHHHHhccccCCcEEeccCc
Q 010913 372 LGESMQIQPHSVDVLVSEWMGYC-L-LYESM--LSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~~~~-l-~~~~~--l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
.. +...++||+|++...... . ..... ...++..+.++|||||+++....
T Consensus 144 ~l---~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 144 YL---ERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp HH---HHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HH---HhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 52 234678999998653221 0 00111 36789999999999999996543
No 219
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.22 E-value=1.8e-11 Score=122.43 Aligned_cols=111 Identities=17% Similarity=0.071 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~--~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++.+|||||||+|.++..+++. +..+|++||+++.+++.|++++.. .++. ..+++++.+|+..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~------------~~~v~~~~~D~~~~ 161 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLA------------DPRATVRVGDGLAF 161 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG------------CTTEEEEESCHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccC------------CCcEEEEECcHHHH
Confidence 46789999999999999999988 456999999999999999987632 1111 25899999999886
Q ss_pred ccccCCCCCceeEEEeccccccccChhhH--HHHHHHHhccccCCcEEecc
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~l--~~vL~~~~r~LkpgG~li~~ 421 (497)
.. ..+.++||+|++....... ....+ ..++..+.++|||||++++.
T Consensus 162 ~~--~~~~~~fDvIi~d~~~~~~-~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 162 VR--QTPDNTYDVVIIDTTDPAG-PASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp HH--SSCTTCEEEEEEECC----------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred HH--hccCCceeEEEECCCCccc-cchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 31 1146789999986532211 11112 57899999999999999854
No 220
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.22 E-value=4.3e-11 Score=121.95 Aligned_cols=111 Identities=23% Similarity=0.277 Sum_probs=87.7
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
.++......++.+|||||||+|.++..+++.+ ..+++++|+ +.+++.|++++..+++ .++++++.
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-------------~~~v~~~~ 239 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL-------------SDRVDVVE 239 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC-------------TTTEEEEE
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC-------------CCceEEEe
Confidence 34444556778999999999999999999883 358999999 8999999999988877 35899999
Q ss_pred cchhhcccccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEecc
Q 010913 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 367 gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~~ 421 (497)
+|+.+. ++. .||+|++.. ++++..+ ...++.++.++|||||.+++.
T Consensus 240 ~d~~~~-----~~~-~~D~v~~~~---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 240 GDFFEP-----LPR-KADAIILSF---VLLNWPDHDAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp CCTTSC-----CSS-CEEEEEEES---CGGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCCC-----CCC-CccEEEEcc---cccCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 998752 333 499999654 4433333 358999999999999998844
No 221
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.21 E-value=5.5e-11 Score=125.24 Aligned_cols=117 Identities=15% Similarity=0.174 Sum_probs=91.3
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~-G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
...+|.+|||+|||+|..+..+++. +. .+|+|+|+++.+++.++++++.+|+ .++.++.+|+..
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~--------------~~v~~~~~D~~~ 321 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI--------------KIVKPLVKDARK 321 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC--------------CSEEEECSCTTC
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC--------------CcEEEEEcChhh
Confidence 4578899999999999999999986 32 6999999999999999999999887 579999999987
Q ss_pred cccccCCCCCceeEEEeccc--ccc-ccChhh----------------HHHHHHHHhccccCCcEEeccCceeE
Q 010913 372 LGESMQIQPHSVDVLVSEWM--GYC-LLYESM----------------LSSVLFARDQWLKPGGAILPDTATMF 426 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~--~~~-l~~~~~----------------l~~vL~~~~r~LkpgG~li~~~~~~~ 426 (497)
+.. .++.++||+|++... +.. +...++ ...+|..+.++|||||.|+..+|++.
T Consensus 322 ~~~--~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 322 APE--IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp CSS--SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred cch--hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 631 134478999997431 111 111111 15789999999999999998877663
No 222
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.21 E-value=2.9e-11 Score=128.10 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=89.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.+|.+|||+|||+|..+..+|+. + ..+|+|+|+|+.+++.++++++.+|+ .++.++++|+..+.
T Consensus 116 ~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~--------------~nv~~~~~D~~~~~ 181 (479)
T 2frx_A 116 NAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI--------------SNVALTHFDGRVFG 181 (479)
T ss_dssp CCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC--------------CSEEEECCCSTTHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CcEEEEeCCHHHhh
Confidence 38899999999999999999986 3 46999999999999999999998887 57999999998764
Q ss_pred cccCCCCCceeEEEeccc----cccccCh---------------hhHHHHHHHHhccccCCcEEeccCcee
Q 010913 374 ESMQIQPHSVDVLVSEWM----GYCLLYE---------------SMLSSVLFARDQWLKPGGAILPDTATM 425 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~----~~~l~~~---------------~~l~~vL~~~~r~LkpgG~li~~~~~~ 425 (497)
....++||+|+++.. +..-... .....+|..+.++|||||+|+.++|++
T Consensus 182 ---~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 182 ---AAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp ---HHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ---hhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 113578999998532 1111111 113468899999999999999888876
No 223
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.20 E-value=3.2e-11 Score=115.90 Aligned_cols=107 Identities=19% Similarity=0.171 Sum_probs=68.0
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE-e
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV-Q 366 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i-~ 366 (497)
.+.......++.+|||||||||.++..+++.|+.+|+|||+|+.|++.|+++.. ++... .
T Consensus 28 ~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~-------------------~~~~~~~ 88 (232)
T 3opn_A 28 ALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE-------------------RVVVMEQ 88 (232)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT-------------------TEEEECS
T ss_pred HHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc-------------------ccccccc
Confidence 333333335678999999999999999999987799999999999998766421 22211 1
Q ss_pred cchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 367 gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.++..+.. ..++...+|.+.+... +.. +..+|.++.++|||||.+++
T Consensus 89 ~~~~~~~~-~~~~~~~~d~~~~D~v---~~~---l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 89 FNFRNAVL-ADFEQGRPSFTSIDVS---FIS---LDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp CCGGGCCG-GGCCSCCCSEEEECCS---SSC---GGGTHHHHHHHSCTTCEEEE
T ss_pred ceEEEeCH-hHcCcCCCCEEEEEEE---hhh---HHHHHHHHHHhccCCCEEEE
Confidence 12221110 0011112344443221 111 16689999999999999985
No 224
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.19 E-value=3.1e-11 Score=121.76 Aligned_cols=111 Identities=15% Similarity=0.107 Sum_probs=86.4
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
..++......+ .+|||||||+|.++..+++. +..+++++|+ +.+++.|++++...++ .++++++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-------------~~~v~~~ 222 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA-------------GERVSLV 222 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH-------------TTSEEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC-------------CCcEEEe
Confidence 34444444455 89999999999999999987 3459999999 9999999998776655 2589999
Q ss_pred ecchhhcccccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEecc
Q 010913 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 366 ~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.+|+.+. ++ ++||+|++.. ++++. .....++..+.++|+|||.+++.
T Consensus 223 ~~d~~~~-----~~-~~~D~v~~~~---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 223 GGDMLQE-----VP-SNGDIYLLSR---IIGDLDEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp ESCTTTC-----CC-SSCSEEEEES---CGGGCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cCCCCCC-----CC-CCCCEEEEch---hccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9998762 33 6799999655 44433 34458999999999999998854
No 225
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.19 E-value=5.7e-11 Score=122.12 Aligned_cols=115 Identities=20% Similarity=0.171 Sum_probs=87.4
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
....++... ..++.+|||+|||+|.+++.++..+. .+|+|+|+|+.+++.|++++..+|+. ++++
T Consensus 206 la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~-------------~~i~ 271 (373)
T 3tm4_A 206 IANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL-------------DKIK 271 (373)
T ss_dssp HHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG-------------GGCE
T ss_pred HHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC-------------CceE
Confidence 444444444 57889999999999999999999865 48999999999999999999999873 5899
Q ss_pred EEecchhhcccccCCCCCceeEEEecccccc-ccC---hhh-HHHHHHHHhccccCCcEE
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYC-LLY---ESM-LSSVLFARDQWLKPGGAI 418 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~-l~~---~~~-l~~vL~~~~r~LkpgG~l 418 (497)
++++|+.++. .+.++||+|++++.... +.. ... ...++..+.++| +|+.+
T Consensus 272 ~~~~D~~~~~----~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~ 326 (373)
T 3tm4_A 272 FIQGDATQLS----QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGV 326 (373)
T ss_dssp EEECCGGGGG----GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEE
T ss_pred EEECChhhCC----cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEE
Confidence 9999999874 56689999999863211 111 112 267788888988 43333
No 226
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.18 E-value=9.6e-11 Score=122.79 Aligned_cols=117 Identities=19% Similarity=0.149 Sum_probs=88.3
Q ss_pred hHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 010913 282 TDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 282 ~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~ 361 (497)
++.+.+.++......++.+|||+|||+|.+++.+++.+. +|+|+|+|+.+++.|+++++.+++ .+
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~-~V~gvD~s~~al~~A~~n~~~~~~--------------~~ 335 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAA-SVVGVEGVPALVEKGQQNARLNGL--------------QN 335 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHTTC--------------CS
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCC-EEEEEeCCHHHHHHHHHHHHHcCC--------------Cc
Confidence 344555555555566788999999999999999999854 999999999999999999999987 58
Q ss_pred eEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++++++|+.+....++++.++||+|++++.-..+ ..++..+. .++|++++++
T Consensus 336 v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~------~~~~~~l~-~~~p~~ivyv 387 (433)
T 1uwv_A 336 VTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA------AGVMQQII-KLEPIRIVYV 387 (433)
T ss_dssp EEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC------HHHHHHHH-HHCCSEEEEE
T ss_pred eEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH------HHHHHHHH-hcCCCeEEEE
Confidence 9999999987432223455789999988632211 23444443 3789988874
No 227
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.17 E-value=9.9e-12 Score=119.66 Aligned_cols=101 Identities=9% Similarity=0.109 Sum_probs=77.0
Q ss_pred CCCEEEEEcCCCCHhHHHHHHc-----CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 297 KGAVVMDIGCGTGILSLFAAQA-----GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~-----G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
++.+|||||||+|..+..+++. +..+|+|||+|+.+++.|+. + ..+|+++++|+.+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~-------------~~~v~~~~gD~~~ 141 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------D-------------MENITLHQGDCSD 141 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------G-------------CTTEEEEECCSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------c-------------CCceEEEECcchh
Confidence 5689999999999999999986 23599999999999887761 1 1579999999987
Q ss_pred cccccCC-CCCceeEEEeccccccccChhhHHHHHHHHhc-cccCCcEEeccCc
Q 010913 372 LGESMQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQ-WLKPGGAILPDTA 423 (497)
Q Consensus 372 l~~~l~~-~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r-~LkpgG~li~~~~ 423 (497)
... ++. ...+||+|++... + .....+|.++.+ +|||||+|++...
T Consensus 142 ~~~-l~~~~~~~fD~I~~d~~-----~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 142 LTT-FEHLREMAHPLIFIDNA-----H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SGG-GGGGSSSCSSEEEEESS-----C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HHH-HHhhccCCCCEEEECCc-----h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 410 112 2347999997542 2 256778999997 9999999996543
No 228
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=4.3e-11 Score=107.79 Aligned_cols=102 Identities=21% Similarity=0.299 Sum_probs=75.1
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc-CC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA-GA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~-G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
.+.++.+|||+|||+|.++..+++. |. .+|+|+|+++ ++.. .+++++.+|+.+
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------------------~~~~~~~~d~~~ 73 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------------------VGVDFLQGDFRD 73 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC------------------------TTEEEEESCTTS
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc------------------------CcEEEEEccccc
Confidence 3567889999999999999999988 54 6999999999 6531 368999999877
Q ss_pred ccc--ccC--CCCCceeEEEeccccccccCh--hh------HHHHHHHHhccccCCcEEec
Q 010913 372 LGE--SMQ--IQPHSVDVLVSEWMGYCLLYE--SM------LSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 372 l~~--~l~--~~~~~fDvIvs~~~~~~l~~~--~~------l~~vL~~~~r~LkpgG~li~ 420 (497)
... .++ ++.++||+|++....+..... .. ...++..+.++|+|||.+++
T Consensus 74 ~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (180)
T 1ej0_A 74 ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV 134 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 520 000 456789999986533222111 11 16789999999999999983
No 229
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.16 E-value=1.5e-10 Score=120.82 Aligned_cols=99 Identities=17% Similarity=0.251 Sum_probs=79.5
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||+|||+|.+++.+|+.+. +|+|+|+|+.+++.|++++..+++ . ++++.+|+.++.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl--------------~-v~~~~~d~~~~~- 350 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNV--------------D-AEFEVASDREVS- 350 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC--------------C-EEEEECCTTTCC-
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC--------------c-EEEEECChHHcC-
Confidence 46788999999999999999999865 999999999999999999998887 4 999999998862
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+ .+||+|++++.-.. ....++..+. .|+|||+++++
T Consensus 351 ----~-~~fD~Vv~dPPr~g-----~~~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 351 ----V-KGFDTVIVDPPRAG-----LHPRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp ----C-TTCSEEEECCCTTC-----SCHHHHHHHH-HHCCSEEEEEE
T ss_pred ----c-cCCCEEEEcCCccc-----hHHHHHHHHH-hcCCCcEEEEE
Confidence 2 28999998763211 1123555544 49999999865
No 230
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.16 E-value=7.5e-11 Score=123.47 Aligned_cols=116 Identities=18% Similarity=0.166 Sum_probs=90.3
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
...+|.+|||+|||+|..+..+++.+ ..+|+|+|+++.+++.+++++..+|+ ++.++.+|+..+
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~---------------~~~~~~~D~~~~ 307 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM---------------KATVKQGDGRYP 307 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC---------------CCEEEECCTTCT
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC---------------CeEEEeCchhhc
Confidence 45788999999999999999999884 36999999999999999999998886 478999998776
Q ss_pred ccccCCCCCceeEEEeccc--cc-cccChhh----------------HHHHHHHHhccccCCcEEeccCceeE
Q 010913 373 GESMQIQPHSVDVLVSEWM--GY-CLLYESM----------------LSSVLFARDQWLKPGGAILPDTATMF 426 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~--~~-~l~~~~~----------------l~~vL~~~~r~LkpgG~li~~~~~~~ 426 (497)
.. .++.++||+|+++.. +. .+.+.++ ...+|..+.++|||||.++.++|++.
T Consensus 308 ~~--~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 308 SQ--WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HH--HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred hh--hcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 31 134578999997532 11 1111111 14789999999999999998887663
No 231
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.15 E-value=1.1e-10 Score=108.42 Aligned_cols=101 Identities=18% Similarity=0.318 Sum_probs=71.7
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-C--CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-G--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G--~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.. .. .++.++++|+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~--------------~~v~~~~~d~~~ 74 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI--------------PNVYFIQGEIGK 74 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC--------------TTCEEEECCTTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC--------------CCceEEEccccc
Confidence 467889999999999999999987 4 3599999999821 11 468899999876
Q ss_pred cccc-------------------c--CCCCCceeEEEeccccccccC-hhh-------HHHHHHHHhccccCCcEEec
Q 010913 372 LGES-------------------M--QIQPHSVDVLVSEWMGYCLLY-ESM-------LSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 372 l~~~-------------------l--~~~~~~fDvIvs~~~~~~l~~-~~~-------l~~vL~~~~r~LkpgG~li~ 420 (497)
.... + .++..+||+|++....+.... ..+ ...++..+.++|||||.+++
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 75 DNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp TSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 5200 0 035678999998753222100 111 13478889999999999984
No 232
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.14 E-value=7.6e-11 Score=120.74 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCC------CCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 296 MKGAVVMDIGCG------TGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 296 ~~~~~VLDvGCG------tG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
.++.+||||||| +|..++.+++. +..+|+|||+|+.|. .. ..+|+++++
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~---------------~~rI~fv~G 271 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD---------------ELRIRTIQG 271 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC---------------BTTEEEEEC
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc---------------CCCcEEEEe
Confidence 467899999999 77777777664 445999999999872 11 258999999
Q ss_pred chhhcccccCCC------CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 368 MVEELGESMQIQ------PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 368 d~~~l~~~l~~~------~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
|+.++. +. .++||+|++... ++..+...+|.++.++|||||++++.
T Consensus 272 Da~dlp----f~~~l~~~d~sFDlVisdgs----H~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 272 DQNDAE----FLDRIARRYGPFDIVIDDGS----HINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp CTTCHH----HHHHHHHHHCCEEEEEECSC----CCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccccc----hhhhhhcccCCccEEEECCc----ccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 998863 44 578999998642 34567888999999999999999864
No 233
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.14 E-value=1.8e-10 Score=107.18 Aligned_cols=91 Identities=18% Similarity=0.112 Sum_probs=71.0
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
..++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.|++++. +++++++|+.++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-------------------~~~~~~~d~~~~-- 107 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-------------------GVNFMVADVSEI-- 107 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-------------------TSEEEECCGGGC--
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-------------------CCEEEECcHHHC--
Confidence 45788999999999999999999887789999999999999998742 579999999875
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWL 412 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~L 412 (497)
+ ++||+|+++++.+.+.. .....++..+.+.|
T Consensus 108 ----~-~~~D~v~~~~p~~~~~~-~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 108 ----S-GKYDTWIMNPPFGSVVK-HSDRAFIDKAFETS 139 (200)
T ss_dssp ----C-CCEEEEEECCCC--------CHHHHHHHHHHE
T ss_pred ----C-CCeeEEEECCCchhccC-chhHHHHHHHHHhc
Confidence 2 68999999864333322 22346788888887
No 234
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.14 E-value=7e-11 Score=109.96 Aligned_cols=99 Identities=18% Similarity=0.257 Sum_probs=71.1
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.++.+|||+|||+|.++..+++.+. +|+|||+++. ..+ .+++++++|+.+...
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~-~V~gvD~~~~-----------~~~--------------~~v~~~~~D~~~~~~ 76 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLAR-KIISIDLQEM-----------EEI--------------AGVRFIRCDIFKETI 76 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCS-EEEEEESSCC-----------CCC--------------TTCEEEECCTTSSSH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCC-cEEEEecccc-----------ccC--------------CCeEEEEccccCHHH
Confidence 46789999999999999999999854 9999999973 111 478999999877420
Q ss_pred cc---C-CC---CCceeEEEeccccccccC--------hhhHHHHHHHHhccccCCcEEe
Q 010913 375 SM---Q-IQ---PHSVDVLVSEWMGYCLLY--------ESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 375 ~l---~-~~---~~~fDvIvs~~~~~~l~~--------~~~l~~vL~~~~r~LkpgG~li 419 (497)
.. . +. .++||+|+|+........ ......++..+.++|||||.++
T Consensus 77 ~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv 136 (191)
T 3dou_A 77 FDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVL 136 (191)
T ss_dssp HHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 00 0 11 148999999753221111 1223567888899999999998
No 235
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.13 E-value=1.9e-10 Score=109.82 Aligned_cols=100 Identities=21% Similarity=0.205 Sum_probs=80.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.+++.+. +..+|+|+|+++.+++.+++++..+|. +..+..+|....
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~---------------~~~~~v~D~~~~--- 163 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW---------------DFTFALQDVLCA--- 163 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC---------------EEEEEECCTTTS---
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC---------------CceEEEeecccC---
Confidence 568899999999999999888 666999999999999999999988875 788999998765
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.+++++|+|++.-+.++|.+... ...+ ++...|+++|+++
T Consensus 164 --~~~~~~DvvLllk~lh~LE~q~~-~~~~-~ll~aL~~~~vvV 203 (253)
T 3frh_A 164 --PPAEAGDLALIFKLLPLLEREQA-GSAM-ALLQSLNTPRMAV 203 (253)
T ss_dssp --CCCCBCSEEEEESCHHHHHHHST-THHH-HHHHHCBCSEEEE
T ss_pred --CCCCCcchHHHHHHHHHhhhhch-hhHH-HHHHHhcCCCEEE
Confidence 35679999997655555544322 2333 7777999999887
No 236
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=107.83 Aligned_cols=101 Identities=23% Similarity=0.270 Sum_probs=72.2
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-CC---------CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-GA---------SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G~---------~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
+.++.+|||+|||+|.++..+++. |. .+|+|+|+|+.. .+ .++.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~--------------~~~~~ 74 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL--------------EGATF 74 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC--------------TTCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC--------------CCCeE
Confidence 467899999999999999999988 64 699999999821 12 36788
Q ss_pred E-ecchhhcccc----cCCCCCceeEEEeccccccccC-hhhH-------HHHHHHHhccccCCcEEec
Q 010913 365 V-QGMVEELGES----MQIQPHSVDVLVSEWMGYCLLY-ESML-------SSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 365 i-~gd~~~l~~~----l~~~~~~fDvIvs~~~~~~l~~-~~~l-------~~vL~~~~r~LkpgG~li~ 420 (497)
+ .+|+...... ..++..+||+|+|.....+..+ ..+. ..++..+.++|||||.+++
T Consensus 75 ~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (196)
T 2nyu_A 75 LCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLC 143 (196)
T ss_dssp ECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 8 8887654200 0133468999998653222212 1222 4789999999999999984
No 237
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.13 E-value=9.8e-11 Score=114.54 Aligned_cols=111 Identities=16% Similarity=0.123 Sum_probs=76.6
Q ss_pred CCEEEEEcCCC--CHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 298 GAVVMDIGCGT--GILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 298 ~~~VLDvGCGt--G~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
...|||||||+ |..+..+++. +..+|++||.|+.|++.|++++...+ ..+++++++|+.++.
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--------------~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--------------EGRTAYVEADMLDPA 144 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--------------SSEEEEEECCTTCHH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--------------CCcEEEEEecccChh
Confidence 36899999997 3344444432 44599999999999999999875432 147999999998753
Q ss_pred cccCCC--CCcee-----EEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 374 ESMQIQ--PHSVD-----VLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 374 ~~l~~~--~~~fD-----vIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
..+..+ ...|| +|+++.+.+++.....+..++..+.+.|+|||+|+++.
T Consensus 145 ~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 145 SILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp HHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred hhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 100000 12343 46665544444433347889999999999999999654
No 238
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.13 E-value=1.4e-10 Score=115.55 Aligned_cols=112 Identities=18% Similarity=0.280 Sum_probs=79.6
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
+.+.+.....+.++.+|||||||+|.++..+++.+. +|+|||+++.+++.|++++..+++ +++++
T Consensus 30 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~--------------~~v~~ 94 (299)
T 2h1r_A 30 ILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGY--------------NNLEV 94 (299)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTC--------------CCEEC
T ss_pred HHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCC--------------CceEE
Confidence 344455555667889999999999999999999865 999999999999999999887775 57999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHHHHH---------------HHHhccccCCcEEe
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVL---------------FARDQWLKPGGAIL 419 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL---------------~~~~r~LkpgG~li 419 (497)
+.+|+..+. ..+||+|+++.. |... ...+..++ ..+.|+++|+|...
T Consensus 95 ~~~D~~~~~------~~~~D~Vv~n~p-y~~~-~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~~~ 156 (299)
T 2h1r_A 95 YEGDAIKTV------FPKFDVCTANIP-YKIS-SPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSN 156 (299)
T ss_dssp ----CCSSC------CCCCSEEEEECC-GGGH-HHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTSTT
T ss_pred EECchhhCC------cccCCEEEEcCC-cccc-cHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCCcc
Confidence 999998753 348999998753 2221 12223333 33567888877543
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.11 E-value=1e-10 Score=112.72 Aligned_cols=112 Identities=11% Similarity=0.071 Sum_probs=86.9
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
.+...++... .++.+|||||||+|.+++.++.. +..+|+|+|+++.+++.+++++..+|+ +.
T Consensus 121 ~fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~---------------~~ 183 (281)
T 3lcv_B 121 EFYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV---------------PH 183 (281)
T ss_dssp HHHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC---------------CE
T ss_pred HHHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC---------------Cc
Confidence 3444454444 45789999999999999999887 677999999999999999999999987 57
Q ss_pred EEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 363 EVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.+...|...- .+++++|+|++.-+..+|.... ....+ .+...|+|+|+++
T Consensus 184 ~~~v~D~~~~-----~p~~~~DvaL~lkti~~Le~q~-kg~g~-~ll~aL~~~~vvV 233 (281)
T 3lcv_B 184 RTNVADLLED-----RLDEPADVTLLLKTLPCLETQQ-RGSGW-EVIDIVNSPNIVV 233 (281)
T ss_dssp EEEECCTTTS-----CCCSCCSEEEETTCHHHHHHHS-TTHHH-HHHHHSSCSEEEE
T ss_pred eEEEeeeccc-----CCCCCcchHHHHHHHHHhhhhh-hHHHH-HHHHHhCCCCEEE
Confidence 8888887653 4688999999776444442221 12333 8889999999988
No 240
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.10 E-value=2.6e-11 Score=118.61 Aligned_cols=98 Identities=11% Similarity=-0.026 Sum_probs=78.3
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~--~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
..+++|||||||+|.++..+++.+ .+|++||+++.+++.|++++.. +++. .++++++.+|+..+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~------------~~rv~~~~~D~~~~- 136 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKN------------NKNFTHAKQLLDLD- 136 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHT------------CTTEEEESSGGGSC-
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccC------------CCeEEEEechHHHH-
Confidence 356899999999999999998887 7999999999999999876432 1111 25899999999875
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
. ++||+|++.. .++..++..+.+.|||||+++..
T Consensus 137 ----~--~~fD~Ii~d~--------~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 137 ----I--KKYDLIFCLQ--------EPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp ----C--CCEEEEEESS--------CCCHHHHHHHHTTEEEEEEEEEE
T ss_pred ----H--hhCCEEEECC--------CChHHHHHHHHHhcCCCcEEEEE
Confidence 2 7899999763 12234889999999999999854
No 241
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.10 E-value=2.5e-10 Score=117.74 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=93.9
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCC---------------------------------------CEE
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA---------------------------------------SRV 323 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~---------------------------------------~~V 323 (497)
+.+...|+......++.+|||+|||+|.+++.+|..+. .+|
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 45677788888888899999999999999999988743 369
Q ss_pred EEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccc-cccChhhHH
Q 010913 324 IAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGY-CLLYESMLS 402 (497)
Q Consensus 324 ~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~-~l~~~~~l~ 402 (497)
+|+|+++.+++.|++++..+|+. ++|++.++|+.++. .+.+||+|++++... -+.....+.
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~-------------~~i~~~~~D~~~l~-----~~~~~D~Iv~NPPyg~rl~~~~~l~ 322 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVD-------------EYIEFNVGDATQFK-----SEDEFGFIITNPPYGERLEDKDSVK 322 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCG-------------GGEEEEECCGGGCC-----CSCBSCEEEECCCCCCSHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChhhcC-----cCCCCcEEEECCCCcCccCCHHHHH
Confidence 99999999999999999999872 47999999999873 356899999997421 122234566
Q ss_pred HHHHHHhccccC--CcEEe
Q 010913 403 SVLFARDQWLKP--GGAIL 419 (497)
Q Consensus 403 ~vL~~~~r~Lkp--gG~li 419 (497)
.+...+.+.||+ ||.++
T Consensus 323 ~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 323 QLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp HHHHHHHHHHHTSBSCEEE
T ss_pred HHHHHHHHHHhhCCCCEEE
Confidence 677777777776 77765
No 242
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.10 E-value=8.5e-11 Score=119.50 Aligned_cols=108 Identities=19% Similarity=0.208 Sum_probs=79.4
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
.++....+.++.+|||||||+|.++..+++. +..+++++|+++ ++. +++++..++ .++|+++.
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~~~~~~~~~-------------~~~v~~~~ 238 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--RHRLDAPDV-------------AGRWKVVE 238 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--TCCCCCGGG-------------TTSEEEEE
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--cccccccCC-------------CCCeEEEe
Confidence 4555556677899999999999999999987 344899999954 443 222222222 35899999
Q ss_pred cchhhcccccCCCCCceeEEEeccccccccChhhH--HHHHHHHhccccCCcEEecc
Q 010913 367 GMVEELGESMQIQPHSVDVLVSEWMGYCLLYESML--SSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 367 gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l--~~vL~~~~r~LkpgG~li~~ 421 (497)
+|+.+ +++ +||+|++.. ++++..+. ..+|.++.++|||||.|++.
T Consensus 239 ~d~~~-----~~p--~~D~v~~~~---vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 239 GDFLR-----EVP--HADVHVLKR---ILHNWGDEDSVRILTNCRRVMPAHGRVLVI 285 (348)
T ss_dssp CCTTT-----CCC--CCSEEEEES---CGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred cCCCC-----CCC--CCcEEEEeh---hccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99973 244 899999654 55544444 68999999999999999853
No 243
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.07 E-value=4.1e-10 Score=116.40 Aligned_cols=120 Identities=17% Similarity=0.123 Sum_probs=92.2
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCC---------------------------------------CEE
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA---------------------------------------SRV 323 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~---------------------------------------~~V 323 (497)
+.+...++......++..|||+|||+|.+++.+|..+. .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 45667777777778899999999999999999987643 259
Q ss_pred EEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccc-cccChhhHH
Q 010913 324 IAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGY-CLLYESMLS 402 (497)
Q Consensus 324 ~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~-~l~~~~~l~ 402 (497)
+|+|+++.+++.|++++..+|+. ++|+++++|+.++. .+.+||+|+++++.. -+.....+.
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~-------------~~I~~~~~D~~~~~-----~~~~fD~Iv~NPPYg~rl~~~~~l~ 328 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLG-------------DLITFRQLQVADFQ-----TEDEYGVVVANPPYGERLEDEEAVR 328 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCT-------------TCSEEEECCGGGCC-----CCCCSCEEEECCCCCCSHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChHhCC-----CCCCCCEEEECCCCccccCCchhHH
Confidence 99999999999999999999983 47999999999873 346899999996421 122224455
Q ss_pred HHHHHHhccccC--CcEEec
Q 010913 403 SVLFARDQWLKP--GGAILP 420 (497)
Q Consensus 403 ~vL~~~~r~Lkp--gG~li~ 420 (497)
.+...+.+.||+ ||.+++
T Consensus 329 ~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 329 QLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp HHHHHHHHHHHTCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEE
Confidence 566666666665 877663
No 244
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.07 E-value=7.5e-10 Score=114.02 Aligned_cols=120 Identities=17% Similarity=0.205 Sum_probs=94.6
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCC---------------------------------------CEE
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA---------------------------------------SRV 323 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~---------------------------------------~~V 323 (497)
+.+...|+......++..|||.+||+|.+++.+|..+. .+|
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 45667777777778899999999999999999987643 259
Q ss_pred EEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccc-cccccChhhHH
Q 010913 324 IAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM-GYCLLYESMLS 402 (497)
Q Consensus 324 ~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~-~~~l~~~~~l~ 402 (497)
+|+|+++.+++.|++++..+|+. +.++++++|+.++. .+.+||+|++++. +.-+.....+.
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~-------------~~I~~~~~D~~~l~-----~~~~fD~Iv~NPPYG~rl~~~~~l~ 321 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLE-------------DVVKLKQMRLQDFK-----TNKINGVLISNPPYGERLLDDKAVD 321 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCT-------------TTEEEEECCGGGCC-----CCCCSCEEEECCCCTTTTSCHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChHHCC-----ccCCcCEEEECCchhhccCCHHHHH
Confidence 99999999999999999999983 57999999999873 2458999999964 22233345666
Q ss_pred HHHHHHhccccC--CcEEec
Q 010913 403 SVLFARDQWLKP--GGAILP 420 (497)
Q Consensus 403 ~vL~~~~r~Lkp--gG~li~ 420 (497)
.+...+.+.||+ ||.+++
T Consensus 322 ~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 322 ILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp HHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHhhCCCcEEEE
Confidence 777777777766 887663
No 245
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.07 E-value=3.1e-10 Score=116.39 Aligned_cols=116 Identities=16% Similarity=0.168 Sum_probs=82.9
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+...++..... .+.+|||+|||+|.+++.+|+. +.+|+|||+|+.+++.|+++++.||+ ++++
T Consensus 201 ~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~--------------~~v~ 264 (369)
T 3bt7_A 201 QMLEWALDVTKG-SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI--------------DNVQ 264 (369)
T ss_dssp HHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC--------------CSEE
T ss_pred HHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC--------------CceE
Confidence 344444444433 3678999999999999999885 55999999999999999999999987 5899
Q ss_pred EEecchhhcccccCCC------------CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 364 VVQGMVEELGESMQIQ------------PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~------------~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
++.+|+.++...+.-. ..+||+|+..+.-.. +...+.+.|+|+|.++..+|+
T Consensus 265 ~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g---------~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 265 IIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG---------LDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp EECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC---------CCHHHHHHHTTSSEEEEEESC
T ss_pred EEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCccc---------cHHHHHHHHhCCCEEEEEECC
Confidence 9999998763111100 137999998763221 122344556688888855554
No 246
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.06 E-value=8.6e-10 Score=106.59 Aligned_cols=85 Identities=19% Similarity=0.252 Sum_probs=69.1
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.|.....+.++.+|||||||+|.++..+++.|. +|+|||+|+.+++.|++++... ++++
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~----------------~~v~ 79 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN-FVTAIEIDHKLCKTTENKLVDH----------------DNFQ 79 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEECSCHHHHHHHHHHTTTC----------------CSEE
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC-eEEEEECCHHHHHHHHHhhccC----------------CCeE
Confidence 4666777777778899999999999999999999985 9999999999999999886431 4799
Q ss_pred EEecchhhcccccCCCC-CceeEEEecc
Q 010913 364 VVQGMVEELGESMQIQP-HSVDVLVSEW 390 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~-~~fDvIvs~~ 390 (497)
++++|+.++. ++. ..| .|+++.
T Consensus 80 ~~~~D~~~~~----~~~~~~~-~vv~nl 102 (244)
T 1qam_A 80 VLNKDILQFK----FPKNQSY-KIFGNI 102 (244)
T ss_dssp EECCCGGGCC----CCSSCCC-EEEEEC
T ss_pred EEEChHHhCC----cccCCCe-EEEEeC
Confidence 9999999874 443 456 466653
No 247
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.05 E-value=2.6e-10 Score=117.46 Aligned_cols=104 Identities=13% Similarity=0.010 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc-eEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK-MEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~-i~~i~gd~~~l 372 (497)
.+|.+|||++||+|.+++.+|+. |+.+|+++|+++.+++.++++++.||+. ++ ++++.+|+.++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~-------------~~~v~v~~~Da~~~ 117 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP-------------EDRYEIHGMEANFF 117 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC-------------GGGEEEECSCHHHH
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC-------------CceEEEEeCCHHHH
Confidence 46789999999999999999985 6679999999999999999999999982 34 99999999886
Q ss_pred ccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
... ....+||+|+..+ +. .+..++..+.+.|+|||+|+..
T Consensus 118 l~~--~~~~~fD~V~lDP--~g-----~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 118 LRK--EWGFGFDYVDLDP--FG-----TPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp HHS--CCSSCEEEEEECC--SS-----CCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHH--hhCCCCcEEEECC--Cc-----CHHHHHHHHHHHhCCCCEEEEE
Confidence 310 1245799999876 21 1245788888899999987743
No 248
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.04 E-value=2.8e-10 Score=116.70 Aligned_cols=104 Identities=16% Similarity=0.135 Sum_probs=79.7
Q ss_pred HHHHhCCC-CCCCCEEEEEcCCCCHhHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 287 QAILENPS-LMKGAVVMDIGCGTGILSLFAAQAG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 287 ~~i~~~~~-~~~~~~VLDvGCGtG~ls~~la~~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
..++.... +.++.+|||||||+|.++..+++.+ ..+++++|+ +.+++.|++. .++++
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------------------~~v~~ 256 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL--------------------SGIEH 256 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------------------TTEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc--------------------CCCEE
Confidence 34444443 5677999999999999999999883 358999999 8888765431 36999
Q ss_pred EecchhhcccccCCCCCceeEEEeccccccccChhhHH--HHHHHHhccccCCcEEecc
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLS--SVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~--~vL~~~~r~LkpgG~li~~ 421 (497)
+.+|+.+ . ++. ||+|++.. ++++..+.. .+|.++.++|||||.+++.
T Consensus 257 ~~~d~~~-~----~~~--~D~v~~~~---~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 257 VGGDMFA-S----VPQ--GDAMILKA---VCHNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EECCTTT-C----CCC--EEEEEEES---SGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeCCccc-C----CCC--CCEEEEec---ccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999876 2 333 99999654 555555555 8999999999999999854
No 249
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.03 E-value=5.3e-10 Score=114.98 Aligned_cols=100 Identities=16% Similarity=0.035 Sum_probs=82.6
Q ss_pred CCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhC---------------CCCCCCCCCCCCCCCCC
Q 010913 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDN---------------DFWWDRPQSEGNINNAG 360 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~---------------gl~~~~~~~~~~~~~~~ 360 (497)
++.+|||+|||+|.+++.+++. |+.+|+++|+++.+++.|+++++.| ++ .
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--------------~ 112 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--------------K 112 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--------------S
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--------------C
Confidence 6889999999999999999998 7678999999999999999999988 65 3
Q ss_pred ceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 361 KMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 361 ~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+++++++|+..+.. ....+||+|+..+.+ ....++..+.+.|||||+++.
T Consensus 113 ~i~v~~~Da~~~~~---~~~~~fD~I~lDP~~-------~~~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 113 TIVINHDDANRLMA---ERHRYFHFIDLDPFG-------SPMEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp EEEEEESCHHHHHH---HSTTCEEEEEECCSS-------CCHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEcCcHHHHHH---hccCCCCEEEeCCCC-------CHHHHHHHHHHhcCCCCEEEE
Confidence 49999999987631 124579999976532 124678888899999998774
No 250
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.02 E-value=6.8e-10 Score=113.78 Aligned_cols=105 Identities=16% Similarity=0.192 Sum_probs=79.5
Q ss_pred HHHHHhCCC-CCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 286 RQAILENPS-LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 286 ~~~i~~~~~-~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
...++.... ..++.+|||||||+|.++..+++. +..+++++|+ +.+++.|++. .+|+
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------------------~~v~ 249 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF--------------------SGVE 249 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------------------TTEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc--------------------CCCE
Confidence 344555554 567799999999999999999987 4458999999 8787655421 4799
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccC--hhhHHHHHHHHhccccCCcEEecc
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLY--ESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~--~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
++.+|+.+. ++.. |+|++.. ++++ ......+|++++++|||||.|++.
T Consensus 250 ~~~~d~~~~-----~p~~--D~v~~~~---vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 250 HLGGDMFDG-----VPKG--DAIFIKW---ICHDWSDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp EEECCTTTC-----CCCC--SEEEEES---CGGGBCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEecCCCCC-----CCCC--CEEEEec---hhhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999998762 4443 9999654 4443 344568999999999999998843
No 251
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.02 E-value=1.2e-09 Score=111.35 Aligned_cols=112 Identities=18% Similarity=0.158 Sum_probs=86.0
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
....++......+..+|||||||+|.++..++++ +..+++..|. +.+++.|++++...+ .++|+
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~--------------~~rv~ 231 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE--------------EEQID 231 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC----------------CCSEE
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc--------------cCcee
Confidence 3445666666677889999999999999999988 4458999997 778999988865444 26999
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccChhh--HHHHHHHHhccccCCcEEec
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESM--LSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~--l~~vL~~~~r~LkpgG~li~ 420 (497)
++.+|+.+. +...+|+|++.. +|++.++ ...+|+++++.|+|||.|++
T Consensus 232 ~~~gD~~~~------~~~~~D~~~~~~---vlh~~~d~~~~~iL~~~~~al~pgg~lli 281 (353)
T 4a6d_A 232 FQEGDFFKD------PLPEADLYILAR---VLHDWADGKCSHLLERIYHTCKPGGGILV 281 (353)
T ss_dssp EEESCTTTS------CCCCCSEEEEES---SGGGSCHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred eecCccccC------CCCCceEEEeee---ecccCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 999998753 234579999544 5554443 46789999999999999884
No 252
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.02 E-value=6.7e-10 Score=112.52 Aligned_cols=133 Identities=14% Similarity=0.085 Sum_probs=88.6
Q ss_pred HHHHHHHhCCCC-CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCC---CCCCCCCCCCCCCCC
Q 010913 284 SYRQAILENPSL-MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDND---FWWDRPQSEGNINNA 359 (497)
Q Consensus 284 ~y~~~i~~~~~~-~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~g---l~~~~~~~~~~~~~~ 359 (497)
.|.+.|...+.. .++++||+||||+|.++..++++++.+|++||+++.+++.|++++...+ +. ....
T Consensus 174 ~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~---------dp~~ 244 (364)
T 2qfm_A 174 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLD---------NLKG 244 (364)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCS---------SSEE
T ss_pred HHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhcccccc---------ccCC
Confidence 455655543321 3578999999999999999999987899999999999999999864321 10 0111
Q ss_pred CceEEEecchhhcccccCCCCCceeEEEecccc-c-c-----ccChhhHHHHHHHHhccccCCcEEeccCcee
Q 010913 360 GKMEVVQGMVEELGESMQIQPHSVDVLVSEWMG-Y-C-----LLYESMLSSVLFARDQWLKPGGAILPDTATM 425 (497)
Q Consensus 360 ~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~-~-~-----l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~ 425 (497)
++++++.+|+..+-....-..++||+|++.... . . +....-...++..+.++|+|||+++...++.
T Consensus 245 ~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 245 DCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp TTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 379999999988631100035789999987532 1 1 1111222333333489999999998555433
No 253
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.02 E-value=2.2e-09 Score=107.37 Aligned_cols=117 Identities=13% Similarity=0.069 Sum_probs=86.6
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
.+.+|.+|||+|||+|..+..+|+. +..+|+|+|+++.+++.++++++.+|+ .+++++.+|+.+
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~--------------~~v~~~~~D~~~ 164 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV--------------SCCELAEEDFLA 164 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC--------------CSEEEEECCGGG
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CeEEEEeCChHh
Confidence 4578899999999999999999986 446999999999999999999999987 579999999988
Q ss_pred cccccCCCCCceeEEEeccc----cccccC----------hhh-------HHHHHHHHhccccCCcEEeccCceeE
Q 010913 372 LGESMQIQPHSVDVLVSEWM----GYCLLY----------ESM-------LSSVLFARDQWLKPGGAILPDTATMF 426 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~----~~~l~~----------~~~-------l~~vL~~~~r~LkpgG~li~~~~~~~ 426 (497)
+....+ ...+||+|++... +..-.+ ... ...+|..+.++|+ ||+|+.++|++.
T Consensus 165 ~~~~~~-~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 165 VSPSDP-RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp SCTTCG-GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred cCcccc-ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 641000 0157999997531 211110 011 1346777888887 999998888763
No 254
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.01 E-value=2.8e-10 Score=106.90 Aligned_cols=85 Identities=26% Similarity=0.325 Sum_probs=69.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++.+|||||||+|.++..++ .+|+|+|+|+. . +.++.+++.++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~------------~-----------------~~~~~~d~~~~--- 109 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL------------D-----------------PRVTVCDMAQV--- 109 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS------------S-----------------TTEEESCTTSC---
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC------------C-----------------ceEEEeccccC---
Confidence 567899999999999988773 48999999985 1 35678888875
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
+++.++||+|++.. +++ ..++..++..+.++|+|||.+++.
T Consensus 110 -~~~~~~fD~v~~~~---~l~-~~~~~~~l~~~~~~L~~gG~l~i~ 150 (215)
T 2zfu_A 110 -PLEDESVDVAVFCL---SLM-GTNIRDFLEEANRVLKPGGLLKVA 150 (215)
T ss_dssp -SCCTTCEEEEEEES---CCC-SSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCCCEeEEEEeh---hcc-ccCHHHHHHHHHHhCCCCeEEEEE
Confidence 46788999999754 443 367889999999999999999854
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.00 E-value=1e-09 Score=108.95 Aligned_cols=86 Identities=21% Similarity=0.383 Sum_probs=73.2
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.|+....+.++.+|||||||+|.++..+++.+. +|+|||+++.+++.|++++... ++++
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~~~----------------~~v~ 99 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKELY----------------NNIE 99 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHHHC----------------SSEE
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhccC----------------CCeE
Confidence 4556677777778899999999999999999999865 9999999999999999988632 5899
Q ss_pred EEecchhhcccccCCCCCceeEEEecc
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEW 390 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~ 390 (497)
++++|+.+++ ++..+||+|+++.
T Consensus 100 vi~gD~l~~~----~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 100 IIWGDALKVD----LNKLDFNKVVANL 122 (295)
T ss_dssp EEESCTTTSC----GGGSCCSEEEEEC
T ss_pred EEECchhhCC----cccCCccEEEEeC
Confidence 9999999874 5566799999874
No 256
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.99 E-value=8.7e-10 Score=112.83 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=78.3
Q ss_pred HHHhCCC-CCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 288 AILENPS-LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 288 ~i~~~~~-~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
.++.... ..++.+|||||||+|.++..+++. +..+++++|+ +.+++.|++. ++|+++
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------------------~~v~~~ 249 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF--------------------PGVTHV 249 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------------------TTEEEE
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc--------------------CCeEEE
Confidence 3444333 567799999999999999999987 4458999999 7777655421 479999
Q ss_pred ecchhhcccccCCCCCceeEEEeccccccccCh--hhHHHHHHHHhccccCCcEEecc
Q 010913 366 QGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE--SMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 366 ~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~--~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.+|+.+ . ++.+ |+|++.. ++++. .....+|++++++|||||.|++.
T Consensus 250 ~~D~~~-~----~p~~--D~v~~~~---vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 250 GGDMFK-E----VPSG--DTILMKW---ILHDWSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp ECCTTT-C----CCCC--SEEEEES---CGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred eCCcCC-C----CCCC--CEEEehH---HhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999976 2 4443 9999654 55433 45678999999999999998843
No 257
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.99 E-value=2e-10 Score=104.65 Aligned_cols=91 Identities=16% Similarity=0.161 Sum_probs=72.7
Q ss_pred CCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 293 PSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+.+|.+|||||||+ +++|+|+.|++.|+++.. .+++++++|+.++
T Consensus 8 ~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~------------------~~~~~~~~d~~~~ 54 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG------------------NEGRVSVENIKQL 54 (176)
T ss_dssp TTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT------------------TTSEEEEEEGGGG
T ss_pred cCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc------------------cCcEEEEechhcC
Confidence 4567899999999996 239999999999998742 2479999999987
Q ss_pred ccccCCCCCceeEEEeccccccccCh-hhHHHHHHHHhccccCCcEEec
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYE-SMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~-~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.. .++++++||+|++.. ++++. .++..++.++.|+|||||.+++
T Consensus 55 ~~-~~~~~~~fD~V~~~~---~l~~~~~~~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 55 LQ-SAHKESSFDIILSGL---VPGSTTLHSAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp GG-GCCCSSCEEEEEECC---STTCCCCCCHHHHHHHHHHEEEEEEEEE
T ss_pred cc-ccCCCCCEeEEEECC---hhhhcccCHHHHHHHHHHHCCCCEEEEE
Confidence 40 012688999999765 45554 6678999999999999999997
No 258
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.99 E-value=5.8e-10 Score=113.20 Aligned_cols=107 Identities=18% Similarity=0.143 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCC------CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGA------SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~------~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
.++.+|||+|||+|.++..+++... .+|+|+|+++.+++.|+.++...|+ ++.++++|.
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~---------------~~~i~~~D~ 193 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ---------------KMTLLHQDG 193 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC---------------CCEEEESCT
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC---------------CceEEECCC
Confidence 4678999999999999999887731 4899999999999999999887765 578999998
Q ss_pred hhcccccCCCCCceeEEEeccccccccChh--------------hH-HHHHHHHhccccCCcEEeccC
Q 010913 370 EELGESMQIQPHSVDVLVSEWMGYCLLYES--------------ML-SSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 370 ~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~--------------~l-~~vL~~~~r~LkpgG~li~~~ 422 (497)
... .+..+||+|+++++...+.... +. ..++..+.++|+|||++++..
T Consensus 194 l~~-----~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 194 LAN-----LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp TSC-----CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCc-----cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 663 3467899999987521221110 11 257888999999999988544
No 259
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.97 E-value=3.8e-11 Score=116.03 Aligned_cols=113 Identities=16% Similarity=0.190 Sum_probs=81.9
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 286 ~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
.+.|.....+.++.+|||+|||+|.++..+++.| .+|+|+|+|+.+++.|++++. + .++++++
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~--~--------------~~~v~~~ 80 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK--L--------------NTRVTLI 80 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT--T--------------CSEEEEC
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc--c--------------CCceEEE
Confidence 3445555566788999999999999999999998 499999999999988776653 1 2589999
Q ss_pred ecchhhcccccCCC-CCceeEEEeccccccccChhhHHHH----------H----HHHhccccCCcEEeccC
Q 010913 366 QGMVEELGESMQIQ-PHSVDVLVSEWMGYCLLYESMLSSV----------L----FARDQWLKPGGAILPDT 422 (497)
Q Consensus 366 ~gd~~~l~~~l~~~-~~~fDvIvs~~~~~~l~~~~~l~~v----------L----~~~~r~LkpgG~li~~~ 422 (497)
++|+.++. ++ .++| .|++++. |... ...+..+ + ..+.|+|+|||.+.+..
T Consensus 81 ~~D~~~~~----~~~~~~f-~vv~n~P-y~~~-~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 81 HQDILQFQ----FPNKQRY-KIVGNIP-YHLS-TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CSCCTTTT----CCCSSEE-EEEEECC-SSSC-HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ECChhhcC----cccCCCc-EEEEeCC-cccc-HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 99998874 44 3678 6777642 2211 1222222 2 55889999999987443
No 260
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.96 E-value=8e-10 Score=112.39 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=75.6
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
+.++.+|||||||+|.++..+++. +..+|+++|+ +.+++.|++. .+++++.+|+.+ .
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------------------~~v~~~~~d~~~-~ 243 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS--------------------NNLTYVGGDMFT-S 243 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB--------------------TTEEEEECCTTT-C
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC--------------------CCcEEEeccccC-C
Confidence 456789999999999999999987 3448999999 8888766531 359999999865 2
Q ss_pred cccCCCCCceeEEEeccccccccChhhHH--HHHHHHhccccC---CcEEecc
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLS--SVLFARDQWLKP---GGAILPD 421 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~--~vL~~~~r~Lkp---gG~li~~ 421 (497)
++ .||+|++.. ++++..+.. .+|.++.++||| ||.+++.
T Consensus 244 ----~p--~~D~v~~~~---~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 244 ----IP--NADAVLLKY---ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp ----CC--CCSEEEEES---CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred ----CC--CccEEEeeh---hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 33 399999654 555545555 899999999999 9998854
No 261
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.92 E-value=1.5e-09 Score=112.66 Aligned_cols=108 Identities=17% Similarity=0.139 Sum_probs=78.5
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQA--GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 286 ~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~--G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.......++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.| .++.
T Consensus 28 ~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------------------~~~~ 84 (421)
T 2ih2_A 28 VDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------------------PWAE 84 (421)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------------------TTEE
T ss_pred HHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------------------CCCc
Confidence 334444444456779999999999999999986 345999999999888655 1689
Q ss_pred EEecchhhcccccCCCCCceeEEEeccccccccC---------hhh-----------------HHHHHHHHhccccCCcE
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLY---------ESM-----------------LSSVLFARDQWLKPGGA 417 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~---------~~~-----------------l~~vL~~~~r~LkpgG~ 417 (497)
++++|+.... +.++||+|++++....... ... ...++..+.++|+|||.
T Consensus 85 ~~~~D~~~~~-----~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~ 159 (421)
T 2ih2_A 85 GILADFLLWE-----PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGV 159 (421)
T ss_dssp EEESCGGGCC-----CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEE
T ss_pred EEeCChhhcC-----ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCE
Confidence 9999998762 3578999999864322211 111 12568889999999999
Q ss_pred Eecc
Q 010913 418 ILPD 421 (497)
Q Consensus 418 li~~ 421 (497)
+++.
T Consensus 160 ~~~i 163 (421)
T 2ih2_A 160 LVFV 163 (421)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8743
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.90 E-value=3.7e-09 Score=102.87 Aligned_cols=89 Identities=16% Similarity=0.163 Sum_probs=69.1
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.|.....+.++.+|||||||+|.++..+++.+. +|+|||+++.+++.+++++... ++++
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~V~avEid~~~~~~~~~~~~~~----------------~~v~ 78 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYNQQ----------------KNIT 78 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS-EEEEEECCHHHHHHHHHHHTTC----------------TTEE
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHhhC----------------CCcE
Confidence 3445566666677899999999999999999999975 9999999999999999987541 4899
Q ss_pred EEecchhhcccccCCCCCceeEEEecc
Q 010913 364 VVQGMVEELGESMQIQPHSVDVLVSEW 390 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~~~fDvIvs~~ 390 (497)
++++|+.+++..--...++|| |+++.
T Consensus 79 ~i~~D~~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 79 IYQNDALQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp EEESCTTTCCGGGSCCSSCEE-EEEEC
T ss_pred EEEcchHhCCHHHhccCCCeE-EEecC
Confidence 999999987411001135688 66664
No 263
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.90 E-value=1.5e-09 Score=114.07 Aligned_cols=119 Identities=20% Similarity=0.079 Sum_probs=86.5
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc--------------CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCC
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA--------------GASRVIAVEASEKMAAVATQIAKDNDFWWDRP 350 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~--------------G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~ 350 (497)
..+.|.......++.+|||+|||+|.++..+++. ...+++|+|+++.++..|+.++...|+..
T Consensus 159 v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~--- 235 (445)
T 2okc_A 159 LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT--- 235 (445)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS---
T ss_pred HHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc---
Confidence 3444544445567889999999999999888864 12479999999999999999988877621
Q ss_pred CCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChh--------------hHHHHHHHHhccccCCc
Q 010913 351 QSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYES--------------MLSSVLFARDQWLKPGG 416 (497)
Q Consensus 351 ~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~--------------~l~~vL~~~~r~LkpgG 416 (497)
.++.++++|..... ...+||+|+++++........ ....++..+.++|||||
T Consensus 236 ---------~~~~i~~gD~l~~~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG 301 (445)
T 2okc_A 236 ---------DRSPIVCEDSLEKE-----PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGG 301 (445)
T ss_dssp ---------SCCSEEECCTTTSC-----CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred ---------CCCCEeeCCCCCCc-----ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCC
Confidence 15778999987653 234899999986432211110 11367888999999999
Q ss_pred EEec
Q 010913 417 AILP 420 (497)
Q Consensus 417 ~li~ 420 (497)
++++
T Consensus 302 ~~a~ 305 (445)
T 2okc_A 302 RAAV 305 (445)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9863
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.84 E-value=3.9e-09 Score=103.54 Aligned_cols=84 Identities=21% Similarity=0.239 Sum_probs=68.6
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.|.....+.++ +|||||||+|.++..+++.|. +|+|||+++.+++.+++++.. .+++
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~-----------------~~v~ 94 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG-----------------LPVR 94 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT-----------------SSEE
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC-----------------CCEE
Confidence 344556666667788 999999999999999999985 899999999999999987631 4799
Q ss_pred EEecchhhcccccCCCC-CceeEEEecc
Q 010913 364 VVQGMVEELGESMQIQP-HSVDVLVSEW 390 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~-~~fDvIvs~~ 390 (497)
++++|+..++ ++. ..+|+|+++.
T Consensus 95 vi~~D~l~~~----~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 95 LVFQDALLYP----WEEVPQGSLLVANL 118 (271)
T ss_dssp EEESCGGGSC----GGGSCTTEEEEEEE
T ss_pred EEECChhhCC----hhhccCccEEEecC
Confidence 9999998874 332 2689999885
No 265
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.83 E-value=1.1e-09 Score=106.89 Aligned_cols=83 Identities=19% Similarity=0.104 Sum_probs=67.6
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCH-------HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASE-------KMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~-------~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
...++.+|||+|||+|.+++.+|+.|. +|+|+|+|+ .+++.|++++..+++. +++++++
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~-------------~ri~~~~ 145 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTA-------------ARINLHF 145 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH-------------TTEEEEE
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCc-------------cCeEEEE
Confidence 345678999999999999999999976 899999999 9999999888777652 3699999
Q ss_pred cchhhcccccCCCC--CceeEEEecccc
Q 010913 367 GMVEELGESMQIQP--HSVDVLVSEWMG 392 (497)
Q Consensus 367 gd~~~l~~~l~~~~--~~fDvIvs~~~~ 392 (497)
+|+.++.. .++. .+||+|++++|.
T Consensus 146 ~d~~~~l~--~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 146 GNAAEQMP--ALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp SCHHHHHH--HHHHHHCCCSEEEECCCC
T ss_pred CCHHHHHH--hhhccCCCccEEEECCCC
Confidence 99988521 1223 689999998753
No 266
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.82 E-value=6.9e-09 Score=102.63 Aligned_cols=95 Identities=15% Similarity=0.167 Sum_probs=67.9
Q ss_pred CCCCCCCCEEEEEcCCC------CHhHHHHHH-cC-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 292 NPSLMKGAVVMDIGCGT------GILSLFAAQ-AG-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 292 ~~~~~~~~~VLDvGCGt------G~ls~~la~-~G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
...+.++.+|||+|||+ |. ..+++ .| ..+|+|+|+|+. + .+++
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v--------------~~v~ 108 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V--------------SDAD 108 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B--------------CSSS
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C--------------CCCE
Confidence 45667899999999954 66 33444 35 359999999986 1 2567
Q ss_pred E-EecchhhcccccCCCCCceeEEEecccccc-----cc---ChhhHHHHHHHHhccccCCcEEec
Q 010913 364 V-VQGMVEELGESMQIQPHSVDVLVSEWMGYC-----LL---YESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 364 ~-i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~-----l~---~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+ +++|+.++. + .++||+|+|+..... +. .......++..+.++|||||.+++
T Consensus 109 ~~i~gD~~~~~----~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 109 STLIGDCATVH----T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp EEEESCGGGCC----C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECccccCC----c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEE
Confidence 8 999998863 3 378999999742111 00 123346789999999999999985
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.81 E-value=1.7e-08 Score=111.79 Aligned_cols=123 Identities=17% Similarity=0.113 Sum_probs=90.5
Q ss_pred HHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCC------------------------------------------
Q 010913 283 DSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGA------------------------------------------ 320 (497)
Q Consensus 283 ~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~------------------------------------------ 320 (497)
+.+...++......++.+|||.+||+|.+++.+|..+.
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 45666777777777889999999999999998887531
Q ss_pred -CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccc-cccccCh
Q 010913 321 -SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM-GYCLLYE 398 (497)
Q Consensus 321 -~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~-~~~l~~~ 398 (497)
.+|+|+|+++.+++.|+.++..+|+. +.|++.++|+.++.. +...++||+||+++. +.-+...
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~-------------~~i~~~~~D~~~~~~--~~~~~~~d~Iv~NPPYG~Rlg~~ 320 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIG-------------ELITFEVKDVAQLTN--PLPKGPYGTVLSNPPYGERLDSE 320 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCG-------------GGEEEEECCGGGCCC--SCTTCCCCEEEECCCCCC---CC
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCC-------------CceEEEECChhhCcc--ccccCCCCEEEeCCCccccccch
Confidence 37999999999999999999999983 469999999988741 222348999999964 2222223
Q ss_pred hhHHHHHHHH---hccccCCcEEec
Q 010913 399 SMLSSVLFAR---DQWLKPGGAILP 420 (497)
Q Consensus 399 ~~l~~vL~~~---~r~LkpgG~li~ 420 (497)
..+..+...+ .+.+.|||.+++
T Consensus 321 ~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 321 PALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred hHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 3444444444 445568999874
No 268
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.79 E-value=4.7e-09 Score=106.94 Aligned_cols=95 Identities=16% Similarity=0.200 Sum_probs=73.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
.++.+|||||||+|.++..+++. +..+++++|+ +.+++.|++ + .+++++.+|+.+ .
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--------------~~v~~~~~d~~~-~- 248 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N--------------ENLNFVGGDMFK-S- 248 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C--------------SSEEEEECCTTT-C-
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C--------------CCcEEEeCccCC-C-
Confidence 45689999999999999999988 3348999999 677765442 1 359999999876 2
Q ss_pred ccCCCCCceeEEEeccccccccChhhHH--HHHHHHhccccC---CcEEecc
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLS--SVLFARDQWLKP---GGAILPD 421 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~--~vL~~~~r~Lkp---gG~li~~ 421 (497)
++ +||+|++.. ++++..+.. .+|.++.++|+| ||.+++.
T Consensus 249 ---~~--~~D~v~~~~---vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 249 ---IP--SADAVLLKW---VLHDWNDEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp ---CC--CCSEEEEES---CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred ---CC--CceEEEEcc---cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 33 499999654 555545544 999999999999 9998853
No 269
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.76 E-value=7.3e-09 Score=107.01 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=66.1
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhC--CCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN--DFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~--gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+|.+|||+|||+|..++.+++.|. +|+|||+|+.+++.|+++++.+ |+ ++++++++|+.++..
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl--------------~~i~~i~~Da~~~L~ 157 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG--------------KDVNILTGDFKEYLP 157 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT--------------CEEEEEESCGGGSHH
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC--------------CcEEEEECcHHHhhh
Confidence 489999999999999999998876 9999999999999999999887 76 589999999987521
Q ss_pred ccCCCCCceeEEEeccc
Q 010913 375 SMQIQPHSVDVLVSEWM 391 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~ 391 (497)
..+..+||+|+++++
T Consensus 158 --~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 158 --LIKTFHPDYIYVDPA 172 (410)
T ss_dssp --HHHHHCCSEEEECCE
T ss_pred --hccCCCceEEEECCC
Confidence 012357999999863
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.73 E-value=1.5e-08 Score=100.78 Aligned_cols=85 Identities=14% Similarity=0.187 Sum_probs=66.9
Q ss_pred hCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 291 ENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
..+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++..+| .+++++++|+
T Consensus 20 ~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g---------------~~v~~v~~d~ 84 (301)
T 1m6y_A 20 EFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS---------------DRVSLFKVSY 84 (301)
T ss_dssp HHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT---------------TTEEEEECCG
T ss_pred HhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC---------------CcEEEEECCH
Confidence 3334568899999999999999999988 34599999999999999999987654 3799999999
Q ss_pred hhcccccC-CCCCceeEEEecc
Q 010913 370 EELGESMQ-IQPHSVDVLVSEW 390 (497)
Q Consensus 370 ~~l~~~l~-~~~~~fDvIvs~~ 390 (497)
.++...++ ....+||+|++..
T Consensus 85 ~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 85 READFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp GGHHHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCEEEEcC
Confidence 88641111 1125799999754
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.68 E-value=2.5e-08 Score=96.57 Aligned_cols=84 Identities=19% Similarity=0.308 Sum_probs=66.6
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceE
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKME 363 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~ 363 (497)
.+.+.|.....+.++.+|||||||+|.++..+++.|+.+|+|||+++.+++.++++ . ..+++
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~---------------~~~v~ 79 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---G---------------DERLE 79 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---C---------------CTTEE
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---c---------------CCCeE
Confidence 45566667677778999999999999999999999766999999999999988765 1 14799
Q ss_pred EEecchhhcccccCCCC--CceeEEEecc
Q 010913 364 VVQGMVEELGESMQIQP--HSVDVLVSEW 390 (497)
Q Consensus 364 ~i~gd~~~l~~~l~~~~--~~fDvIvs~~ 390 (497)
++++|+..++ ++. ..+ +|+++.
T Consensus 80 ~i~~D~~~~~----~~~~~~~~-~vv~Nl 103 (249)
T 3ftd_A 80 VINEDASKFP----FCSLGKEL-KVVGNL 103 (249)
T ss_dssp EECSCTTTCC----GGGSCSSE-EEEEEC
T ss_pred EEEcchhhCC----hhHccCCc-EEEEEC
Confidence 9999998874 322 234 677664
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.66 E-value=3.2e-08 Score=106.36 Aligned_cols=122 Identities=13% Similarity=-0.038 Sum_probs=84.6
Q ss_pred HHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc----C---------------CCEEEEEeCCHHHHHHHHHHHHhCCCC
Q 010913 286 RQAILENPSLMKGAVVMDIGCGTGILSLFAAQA----G---------------ASRVIAVEASEKMAAVATQIAKDNDFW 346 (497)
Q Consensus 286 ~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~----G---------------~~~V~gvD~S~~~i~~A~~~~~~~gl~ 346 (497)
.+.|.......++.+|||.|||+|.+++.+++. + ...++|+|+++.++..|+.++...|+.
T Consensus 158 v~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~ 237 (541)
T 2ar0_A 158 IKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIE 237 (541)
T ss_dssp HHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCC
Confidence 334444444567889999999999998888764 1 137999999999999999998877762
Q ss_pred CCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccC-----------hhhHHHHHHHHhccccCC
Q 010913 347 WDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLY-----------ESMLSSVLFARDQWLKPG 415 (497)
Q Consensus 347 ~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~-----------~~~l~~vL~~~~r~Lkpg 415 (497)
.. ....+.++++|..... +....+||+|+++++...... ...-..++..+.++||||
T Consensus 238 ~~---------~~~~~~I~~gDtL~~~---~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 305 (541)
T 2ar0_A 238 GN---------LDHGGAIRLGNTLGSD---GENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG 305 (541)
T ss_dssp CB---------GGGTBSEEESCTTSHH---HHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred cc---------ccccCCeEeCCCcccc---cccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC
Confidence 00 0012678899876542 123568999999974322111 111236788899999999
Q ss_pred cEEe
Q 010913 416 GAIL 419 (497)
Q Consensus 416 G~li 419 (497)
|+++
T Consensus 306 Gr~a 309 (541)
T 2ar0_A 306 GRAA 309 (541)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 9876
No 273
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.64 E-value=5.4e-08 Score=95.97 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~--~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-||.|.|..+..+++. +..+|+.||+++.+++.|++.+.. .+. ...++++++.+|+..+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~-----------~~dpRv~v~~~Dg~~~ 150 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGS-----------YDDPRFKLVIDDGVNF 150 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTG-----------GGCTTEEEEESCTTTT
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccc-----------cCCCcEEEEechHHHH
Confidence 45689999999999999999998 667999999999999999988643 121 1247899999999887
Q ss_pred ccccCCCCCceeEEEeccccccccChh-hHHHHHHHHhccccCCcEEeccCc
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYES-MLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~-~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
- .-..++||+|+.......-.... .-..++..+++.|+|||+++....
T Consensus 151 l---~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 151 V---NQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp T---SCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred H---hhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 3 34567999999764211100000 114688899999999999995433
No 274
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.64 E-value=6.9e-08 Score=95.06 Aligned_cols=70 Identities=21% Similarity=0.174 Sum_probs=59.0
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCE----EEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASR----VIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~----V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~ 360 (497)
+.+.|.....+.++.+|||||||+|.++..+++.+. + |+|||+++.|++.|+++. . .
T Consensus 30 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~---~---------------~ 90 (279)
T 3uzu_A 30 VIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF---G---------------E 90 (279)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH---G---------------G
T ss_pred HHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc---C---------------C
Confidence 444555555677899999999999999999999865 4 999999999999999883 1 4
Q ss_pred ceEEEecchhhcc
Q 010913 361 KMEVVQGMVEELG 373 (497)
Q Consensus 361 ~i~~i~gd~~~l~ 373 (497)
+++++++|+.+++
T Consensus 91 ~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 91 LLELHAGDALTFD 103 (279)
T ss_dssp GEEEEESCGGGCC
T ss_pred CcEEEECChhcCC
Confidence 7999999999874
No 275
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.62 E-value=2.4e-07 Score=86.51 Aligned_cols=103 Identities=16% Similarity=0.144 Sum_probs=76.2
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCC--CCCCCCCCCCCCCCCceEEEecchhhc--
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDF--WWDRPQSEGNINNAGKMEVVQGMVEEL-- 372 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl--~~~~~~~~~~~~~~~~i~~i~gd~~~l-- 372 (497)
+.++||++|| |..++.+|+...++|++||.++..++.|+++++.+|+ . ++|+++.|++.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~-------------~~I~~~~gda~~~~~ 94 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEG-------------TEVNIVWTDIGPTGD 94 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTT-------------CEEEEEECCCSSBCG
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCC-------------CceEEEEeCchhhhc
Confidence 5679999998 5788888886335999999999999999999999886 3 5899999996542
Q ss_pred -------------cc---cc-CC-CCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccC
Q 010913 373 -------------GE---SM-QI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 373 -------------~~---~l-~~-~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.. .+ .. ..++||+|+...- .....+..+.+.|+|||+|+++.
T Consensus 95 wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~--------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 95 WGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR--------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp GGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS--------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred ccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC--------CchhHHHHHHHhcCCCeEEEEeC
Confidence 00 00 01 2368999996541 11244555668999999998554
No 276
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.62 E-value=2.4e-08 Score=97.14 Aligned_cols=96 Identities=16% Similarity=0.036 Sum_probs=66.8
Q ss_pred HHHhCCCCCCC--CEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 288 AILENPSLMKG--AVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 288 ~i~~~~~~~~~--~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
.+.....+.++ .+|||+|||+|..++.+|+.|+ +|++||+++.++..++++++...-. ...++....+++++
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~-----~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYAD-----AEIGGWLQERLQLI 150 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHC-----TTTHHHHHHHEEEE
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhh-----HhhhhhhhcCEEEE
Confidence 34444455566 8999999999999999999988 7999999999877777665432100 00000001479999
Q ss_pred ecchhhcccccCCCCCceeEEEecccc
Q 010913 366 QGMVEELGESMQIQPHSVDVLVSEWMG 392 (497)
Q Consensus 366 ~gd~~~l~~~l~~~~~~fDvIvs~~~~ 392 (497)
++|+.++. +....+||+|+..+|.
T Consensus 151 ~~D~~~~L---~~~~~~fDvV~lDP~y 174 (258)
T 2oyr_A 151 HASSLTAL---TDITPRPQVVYLDPMF 174 (258)
T ss_dssp ESCHHHHS---TTCSSCCSEEEECCCC
T ss_pred ECCHHHHH---HhCcccCCEEEEcCCC
Confidence 99998863 2223479999998754
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.57 E-value=3e-08 Score=96.21 Aligned_cols=83 Identities=14% Similarity=0.115 Sum_probs=62.6
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCE--EEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCce
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASR--VIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKM 362 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~--V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i 362 (497)
+.+.|.....+.++.+|||||||+|.++. +++ +. + |+|||+++.|++.+++++... +++
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~----------------~~v 69 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG----------------PKL 69 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG----------------GGE
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC----------------Cce
Confidence 44455555566788999999999999999 765 43 6 999999999999888765321 479
Q ss_pred EEEecchhhcccccCCCC-----CceeEEEecc
Q 010913 363 EVVQGMVEELGESMQIQP-----HSVDVLVSEW 390 (497)
Q Consensus 363 ~~i~gd~~~l~~~l~~~~-----~~fDvIvs~~ 390 (497)
+++++|+..++ ++. +..++|+++.
T Consensus 70 ~~i~~D~~~~~----~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 70 TIYQQDAMTFN----FGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp EEECSCGGGCC----HHHHHHHHTSCEEEEEEC
T ss_pred EEEECchhhCC----HHHhhcccCCceEEEECC
Confidence 99999998864 211 2357888875
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.52 E-value=1.1e-07 Score=102.28 Aligned_cols=118 Identities=14% Similarity=-0.050 Sum_probs=81.3
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc--------C--------CCEEEEEeCCHHHHHHHHHHHHhCCCCCC
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA--------G--------ASRVIAVEASEKMAAVATQIAKDNDFWWD 348 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~--------G--------~~~V~gvD~S~~~i~~A~~~~~~~gl~~~ 348 (497)
..+.|.......++ +|||.+||||.+.+.+++. + ...++|+|+++.++..|+.++...|+.
T Consensus 233 Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-- 309 (544)
T 3khk_A 233 IVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID-- 309 (544)
T ss_dssp HHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC--
Confidence 33444443333444 9999999999988877542 0 238999999999999999999888872
Q ss_pred CCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEecccccc-------------------------ccChhh-HH
Q 010913 349 RPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYC-------------------------LLYESM-LS 402 (497)
Q Consensus 349 ~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~-------------------------l~~~~~-l~ 402 (497)
.++.++++|..... .++..+||+|+++++... +..... --
T Consensus 310 -----------~~i~i~~gDtL~~~---~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~ 375 (544)
T 3khk_A 310 -----------FNFGKKNADSFLDD---QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANF 375 (544)
T ss_dssp -----------CBCCSSSCCTTTSC---SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHH
T ss_pred -----------cccceeccchhcCc---ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhH
Confidence 34555778765542 245678999999974321 111111 12
Q ss_pred HHHHHHhccccCCcEEe
Q 010913 403 SVLFARDQWLKPGGAIL 419 (497)
Q Consensus 403 ~vL~~~~r~LkpgG~li 419 (497)
.++..+.+.|+|||++.
T Consensus 376 ~Fl~~~l~~Lk~gGr~a 392 (544)
T 3khk_A 376 AWMLHMLYHLAPTGSMA 392 (544)
T ss_dssp HHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHhccCceEE
Confidence 57888999999999965
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.44 E-value=1.1e-06 Score=94.34 Aligned_cols=112 Identities=14% Similarity=-0.012 Sum_probs=82.5
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc----CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA----GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~----G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~ 370 (497)
..++.+|||.+||+|.+.+.+++. +...++|+|+++.++..|+.++...|+.. +++.++++|..
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~------------~~~~I~~gDtL 286 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI------------ENQFLHNADTL 286 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG------------GGEEEEESCTT
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc------------CccceEeccee
Confidence 357889999999999998888776 34589999999999999999988887621 36889999987
Q ss_pred hcccccCCCCCceeEEEecccccccc-------------------Chhh-HHHHHHHHhcccc-CCcEEe
Q 010913 371 ELGESMQIQPHSVDVLVSEWMGYCLL-------------------YESM-LSSVLFARDQWLK-PGGAIL 419 (497)
Q Consensus 371 ~l~~~l~~~~~~fDvIvs~~~~~~l~-------------------~~~~-l~~vL~~~~r~Lk-pgG~li 419 (497)
..+.. ..+..+||+|+++++...-. .... --.++..+.+.|+ |||++.
T Consensus 287 ~~d~p-~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 287 DEDWP-TQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp TSCSC-CSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred ccccc-ccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 54200 13467899999997422100 0001 1247888999999 999975
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.42 E-value=1e-07 Score=92.37 Aligned_cols=116 Identities=17% Similarity=0.192 Sum_probs=72.9
Q ss_pred HHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
|.....+.++.+|||+|||+|.++..+++. |+..|+|+|++-.+...+. .+ . ....++..+.+
T Consensus 66 i~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi-----~~----------~-~~g~~ii~~~~ 129 (277)
T 3evf_A 66 FHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPM-----NV----------Q-SLGWNIITFKD 129 (277)
T ss_dssp HHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCC-----CC----------C-BTTGGGEEEEC
T ss_pred HHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccc-----cc----------C-cCCCCeEEEec
Confidence 333345678889999999999999998876 7778999999843210000 00 0 00114455666
Q ss_pred chhhcccccCCCCCceeEEEeccccccccChhh---HHHHHHHHhccccCC-cEEeccCce
Q 010913 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESM---LSSVLFARDQWLKPG-GAILPDTAT 424 (497)
Q Consensus 368 d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~---l~~vL~~~~r~Lkpg-G~li~~~~~ 424 (497)
++... .++..+||+|+|..+...-.+..+ ...+|..+.++|+|| |.+++....
T Consensus 130 ~~dv~----~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 130 KTDIH----RLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp SCCTT----TSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cceeh----hcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 55333 366789999999853331111111 123467889999999 999954433
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.37 E-value=8.4e-07 Score=90.18 Aligned_cols=132 Identities=14% Similarity=0.078 Sum_probs=88.0
Q ss_pred HHHHHHHHhCCC-CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 010913 283 DSYRQAILENPS-LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 283 ~~y~~~i~~~~~-~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~ 361 (497)
..|.+.+...+. ..++++||-||.|.|..+..+.+.+..+|+.||+++.+++.|++.+.... ....+....++
T Consensus 190 ~~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~------~~~~d~pr~~r 263 (381)
T 3c6k_A 190 LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTC------GDVLDNLKGDC 263 (381)
T ss_dssp HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----------CCSSSEETT
T ss_pred HHHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhh------hhhhccccccc
Confidence 346566554332 23568999999999999999999877899999999999999998753210 00112222357
Q ss_pred eEEEecchhhcccccCCCCCceeEEEecccccc----cc--Ch-hhHHHHHHHHhccccCCcEEec
Q 010913 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYC----LL--YE-SMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~----l~--~~-~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++++.+|+..+-....-..++||+|+....... .. .. ---..++..+.+.|+|||+++.
T Consensus 264 v~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 264 YQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp EEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred eeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 999999987653111112468999997632110 00 01 1125678889999999999983
No 282
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.36 E-value=8e-07 Score=90.37 Aligned_cols=122 Identities=20% Similarity=0.186 Sum_probs=91.2
Q ss_pred CCCCCCEEEEEcCCCCHhHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 294 SLMKGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG~ls~~la~~G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
...+|.+|||+.||.|.=+..++..+. ..|+|+|+++.-+...+++++..+... .....++.+...|...+
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~--------~~~~~~v~v~~~D~~~~ 216 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEE--------IRDGNQVRVTSWDGRKW 216 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTT--------TTTSSSEEEECCCGGGH
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhh--------hccCCceEEEeCchhhc
Confidence 457899999999999999999988844 479999999999999999988766521 00124788999998876
Q ss_pred ccccCCCCCceeEEEeccc--c--ccccC----------h-------hhHHHHHHHHhccccCCcEEeccCceeE
Q 010913 373 GESMQIQPHSVDVLVSEWM--G--YCLLY----------E-------SMLSSVLFARDQWLKPGGAILPDTATMF 426 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~--~--~~l~~----------~-------~~l~~vL~~~~r~LkpgG~li~~~~~~~ 426 (497)
. ....++||.|+.... + ..... . .....+|....++|||||+|+-+||++.
T Consensus 217 ~---~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 217 G---ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp H---HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred c---hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 4 245678999997532 1 11110 0 1124678888999999999999999874
No 283
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.30 E-value=1.8e-06 Score=95.06 Aligned_cols=115 Identities=13% Similarity=0.015 Sum_probs=76.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-C---CCEEEEEeCCHHHHHHH--HHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-G---ASRVIAVEASEKMAAVA--TQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G---~~~V~gvD~S~~~i~~A--~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
..++.+|||.|||+|.+++.+++. + ..+++|+|+++.++..| +.++..+++.+ ......+..++
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Llh----------Gi~~~~I~~dD 388 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVS----------SNNAPTITGED 388 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCB----------TTBCCEEECCC
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhc----------CCCcceEEecc
Confidence 356889999999999999999886 3 24799999999999999 54444433311 00123555666
Q ss_pred hhhcccccCCCCCceeEEEeccccccccC-hh-------------------------hHHHHHHHHhccccCCcEEeccC
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLY-ES-------------------------MLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~-~~-------------------------~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
+.... +....+||+||++++...... .. ....++..+.++|+|||++.+-.
T Consensus 389 ~L~~~---~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 389 VCSLN---PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp GGGCC---GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhccc---ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 65532 134578999999974311011 00 12346778889999999987433
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.23 E-value=2.7e-07 Score=89.59 Aligned_cols=113 Identities=18% Similarity=0.211 Sum_probs=69.8
Q ss_pred HHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
|.....+.++.+|||||||+|.++..+++. |+..|+|+|++..+...+... ... ..++.....
T Consensus 82 i~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~---------------g~~ii~~~~ 145 (282)
T 3gcz_A 82 MEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL---------------GWNLIRFKD 145 (282)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT---------------TGGGEEEEC
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC---------------CCceEEeeC
Confidence 334445678899999999999999998865 888899999986532111100 000 123333333
Q ss_pred chhhcccccCCCCCceeEEEeccccccccCh---hhHHHHHHHHhccccCC--cEEecc
Q 010913 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYE---SMLSSVLFARDQWLKPG--GAILPD 421 (497)
Q Consensus 368 d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~---~~l~~vL~~~~r~Lkpg--G~li~~ 421 (497)
++... .++..++|+|+|......-... .....+|.-+.++|+|| |.++.-
T Consensus 146 ~~dv~----~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 146 KTDVF----NMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp SCCGG----GSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred Ccchh----hcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 32222 2567899999998533211101 11123577778999999 999843
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.22 E-value=1.6e-06 Score=84.17 Aligned_cols=119 Identities=21% Similarity=0.161 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc-------CC------CEEEEEeCCH---HHHH-----------HHHHHHHhCCCCCC
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA-------GA------SRVIAVEASE---KMAA-----------VATQIAKDNDFWWD 348 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~-------G~------~~V~gvD~S~---~~i~-----------~A~~~~~~~gl~~~ 348 (497)
.++.+|||||+|+|..++.+++. +. .+++++|..+ ..+. .|++.+......
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~-- 136 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMP-- 136 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCS--
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccc--
Confidence 35679999999999987775542 21 3899999876 4433 555555431000
Q ss_pred CCCCC--CCCCCCCceEEEecchhhcccccCCCC---CceeEEEeccccccccChhh-HHHHHHHHhccccCCcEEe
Q 010913 349 RPQSE--GNINNAGKMEVVQGMVEELGESMQIQP---HSVDVLVSEWMGYCLLYESM-LSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 349 ~~~~~--~~~~~~~~i~~i~gd~~~l~~~l~~~~---~~fDvIvs~~~~~~l~~~~~-l~~vL~~~~r~LkpgG~li 419 (497)
..... .......+++++.||+.+.-.. .+. ..||+|+...+.-.- ++.+ -..+|..+.++|+|||+|+
T Consensus 137 ~~g~~r~~~~~~~~~l~l~~GDa~~~l~~--~~~~~~~~~D~iflD~fsp~~-~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 137 LPGCHRLLLDEGRVTLDLWFGDINELISQ--LDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp CSEEEEEEEC--CEEEEEEESCHHHHGGG--SCGGGTTCEEEEEECSSCTTT-CGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred ccchhheeccCCceEEEEEECcHHHHHhh--cccccCCeEEEEEECCCCccc-ChhhcCHHHHHHHHHHcCCCcEEE
Confidence 00000 0000124688999999885211 212 279999975422111 1222 2578999999999999998
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.20 E-value=7.4e-06 Score=80.45 Aligned_cols=109 Identities=13% Similarity=0.110 Sum_probs=80.8
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc----C--CCEEEEEeCCHH--------------------------HHHHHHHHHHhC
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA----G--ASRVIAVEASEK--------------------------MAAVATQIAKDN 343 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~----G--~~~V~gvD~S~~--------------------------~i~~A~~~~~~~ 343 (497)
..++.||++|+.+|..++.++.. | ..+|+++|..+. .++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 45679999999999988887654 1 458999996421 366789999988
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 344 DFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 344 gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
|+. .++|+++.|++.+.-. .++..+||+|+... - .+. .....|..+...|+|||+|+++..
T Consensus 185 gl~------------~~~I~li~Gda~etL~--~~~~~~~d~vfIDa---D-~y~-~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLL------------DEQVRFLPGWFKDTLP--TAPIDTLAVLRMDG---D-LYE-STWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCC------------STTEEEEESCHHHHST--TCCCCCEEEEEECC---C-SHH-HHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCC------------cCceEEEEeCHHHHHh--hCCCCCEEEEEEcC---C-ccc-cHHHHHHHHHhhcCCCEEEEEcCC
Confidence 872 1589999999977532 13357899999653 2 222 234678889999999999997654
No 287
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.19 E-value=4.5e-06 Score=84.53 Aligned_cols=70 Identities=17% Similarity=0.214 Sum_probs=56.1
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
+.+|.+|||+||++|.++..+++.|+ +|+|||+.+ |.. .+... ++|+++++|+..+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-l~~----~l~~~----------------~~V~~~~~d~~~~~- 265 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-MAQ----SLMDT----------------GQVTWLREDGFKFR- 265 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-CCH----HHHTT----------------TCEEEECSCTTTCC-
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-cCh----hhccC----------------CCeEEEeCcccccc-
Confidence 46899999999999999999999987 999999875 221 11111 57999999998874
Q ss_pred ccCCCCCceeEEEecc
Q 010913 375 SMQIQPHSVDVLVSEW 390 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~ 390 (497)
.+..+||+|+|..
T Consensus 266 ---~~~~~~D~vvsDm 278 (375)
T 4auk_A 266 ---PTRSNISWMVCDM 278 (375)
T ss_dssp ---CCSSCEEEEEECC
T ss_pred ---CCCCCcCEEEEcC
Confidence 4567899999984
No 288
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.12 E-value=3.4e-06 Score=79.45 Aligned_cols=109 Identities=20% Similarity=0.274 Sum_probs=73.0
Q ss_pred HHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 288 AILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 288 ~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
.|.....+.++.+|||+||++|.++..++.. |+.+|+|+|+-..-.+. -..++..|. ..|+|..
T Consensus 69 ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gw--------------n~v~fk~ 133 (267)
T 3p8z_A 69 WFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGW--------------NIVKLMS 133 (267)
T ss_dssp HHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTT--------------TSEEEEC
T ss_pred HHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCc--------------CceEEEe
Confidence 3444446678999999999999999988877 88899999997632210 001112232 5789999
Q ss_pred c-chhhcccccCCCCCceeEEEeccccccccC-hhh---HHHHHHHHhccccCCcEEe
Q 010913 367 G-MVEELGESMQIQPHSVDVLVSEWMGYCLLY-ESM---LSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 367 g-d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~-~~~---l~~vL~~~~r~LkpgG~li 419 (497)
+ |+..+ ++.++|+|+|. |+-.-.. ..+ -..+|.-+.++|++ |.++
T Consensus 134 gvDv~~~------~~~~~DtllcD-IgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc 183 (267)
T 3p8z_A 134 GKDVFYL------PPEKCDTLLCD-IGESSPSPTVEESRTIRVLKMVEPWLKN-NQFC 183 (267)
T ss_dssp SCCGGGC------CCCCCSEEEEC-CCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEE
T ss_pred ccceeec------CCccccEEEEe-cCCCCCChhhhhhHHHHHHHHHHHhccc-CCEE
Confidence 9 98665 34779999997 3332222 111 12367777899999 5555
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.04 E-value=6.1e-06 Score=80.43 Aligned_cols=82 Identities=22% Similarity=0.253 Sum_probs=64.5
Q ss_pred HHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 289 ILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
++..+.+.++.++||.+||.|..|..+++++. +|+|+|.++.+++.|++ +.. +++++++++
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~~g-~VigiD~Dp~Ai~~A~~-L~~-----------------~rv~lv~~~ 74 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILERGG-RVIGLDQDPEAVARAKG-LHL-----------------PGLTVVQGN 74 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHH-TCC-----------------TTEEEEESC
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHCCC-EEEEEeCCHHHHHHHHh-hcc-----------------CCEEEEECC
Confidence 33444567889999999999999999999854 99999999999998887 522 389999999
Q ss_pred hhhcccccC-CCCCceeEEEec
Q 010913 369 VEELGESMQ-IQPHSVDVLVSE 389 (497)
Q Consensus 369 ~~~l~~~l~-~~~~~fDvIvs~ 389 (497)
..++...+. ....+||.|+..
T Consensus 75 f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 75 FRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp GGGHHHHHHHTTCSCEEEEEEE
T ss_pred cchHHHHHHHcCCCCcCEEEeC
Confidence 988753221 223579999965
No 290
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.00 E-value=3.7e-05 Score=78.43 Aligned_cols=118 Identities=15% Similarity=0.098 Sum_probs=64.5
Q ss_pred CCEEEEEcCCCCHhHHHHHHc----------------CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCC---CCC-CCCC
Q 010913 298 GAVVMDIGCGTGILSLFAAQA----------------GASRVIAVEASEKMAAVATQIAKDNDFWWDRP---QSE-GNIN 357 (497)
Q Consensus 298 ~~~VLDvGCGtG~ls~~la~~----------------G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~---~~~-~~~~ 357 (497)
+.+|+|+|||+|..++.++.. +.-+|+..|+....-. ..++...-..... .+. ....
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn---~lF~~L~~~~~~~~~~~~~~~~~~ 129 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFN---TLFQLLPPLVSNTCMEECLAADGN 129 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHH---HHHHHSCCBCCCC--CCC---CCC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchH---HHHhhhhhhhhhcchhhhccccCC
Confidence 589999999999988877321 1126777776654332 1121111000000 000 0000
Q ss_pred CCCceEEEecchhhcccccCCCCCceeEEEeccccccccCh-----------------------------------hhHH
Q 010913 358 NAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE-----------------------------------SMLS 402 (497)
Q Consensus 358 ~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~-----------------------------------~~l~ 402 (497)
.+--+.-+.|....- .+|.++||+|+|+...+.+... .++.
T Consensus 130 ~~~f~~gvpgSFy~r----lfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~ 205 (374)
T 3b5i_A 130 RSYFVAGVPGSFYRR----LFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLA 205 (374)
T ss_dssp BCSEEEEEESCTTSC----CSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEecChhhhcc----cCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHH
Confidence 000122233333322 3789999999997633333211 2566
Q ss_pred HHHHHHhccccCCcEEeccC
Q 010913 403 SVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 403 ~vL~~~~r~LkpgG~li~~~ 422 (497)
.+|..+.+.|+|||++++..
T Consensus 206 ~fL~~ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 206 EFLRARAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEE
Confidence 78999999999999999543
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.93 E-value=3.5e-05 Score=74.95 Aligned_cols=112 Identities=20% Similarity=0.237 Sum_probs=72.7
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
..|.....+.++.+||||||++|.++..++.. |+..|+|+|+...-.+. -..++..+. ..|.++
T Consensus 84 ~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w--------------~lV~~~ 148 (321)
T 3lkz_A 84 RWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGW--------------NIVTMK 148 (321)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTG--------------GGEEEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCC--------------cceEEE
Confidence 34444456778899999999999999988776 88899999997641100 000001111 347888
Q ss_pred ec-chhhcccccCCCCCceeEEEeccccccccC-hhh---HHHHHHHHhccccCC-cEEec
Q 010913 366 QG-MVEELGESMQIQPHSVDVLVSEWMGYCLLY-ESM---LSSVLFARDQWLKPG-GAILP 420 (497)
Q Consensus 366 ~g-d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~-~~~---l~~vL~~~~r~Lkpg-G~li~ 420 (497)
.+ |+..+ ++.++|+|+|.. +-.-.. ..+ -..+|.-+.++|++| |.+++
T Consensus 149 ~~~Dv~~l------~~~~~D~ivcDi-geSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 149 SGVDVFYR------PSECCDTLLCDI-GESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CSCCTTSS------CCCCCSEEEECC-CCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred eccCHhhC------CCCCCCEEEEEC-ccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 87 88765 346799999873 322111 111 123677778999998 77763
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.90 E-value=1e-05 Score=77.37 Aligned_cols=110 Identities=18% Similarity=0.194 Sum_probs=64.2
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCceEE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKD-NDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~-~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
..|-+..-+.+|.+|||+||+.|..|..+++. +...|.|.++.... . ....... .|. .-+++
T Consensus 63 ~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv--------------~~i~~ 126 (269)
T 2px2_A 63 RWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGW--------------NIVTM 126 (269)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTG--------------GGEEE
T ss_pred HHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCc--------------eEEEe
Confidence 33444444578999999999999999999987 34344454443210 0 0000000 111 12466
Q ss_pred Eec-chhhcccccCCCCCceeEEEeccccccccC-hhhHH---HHHHHHhccccCCc-EEe
Q 010913 365 VQG-MVEELGESMQIQPHSVDVLVSEWMGYCLLY-ESMLS---SVLFARDQWLKPGG-AIL 419 (497)
Q Consensus 365 i~g-d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~-~~~l~---~vL~~~~r~LkpgG-~li 419 (497)
.++ |+.++ ++.++|+|+|.... .-.. .-+-. .+|.-+.++|+||| .++
T Consensus 127 ~~G~Df~~~------~~~~~DvVLSDMAP-nSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fv 180 (269)
T 2px2_A 127 KSGVDVFYK------PSEISDTLLCDIGE-SSPSAEIEEQRTLRILEMVSDWLSRGPKEFC 180 (269)
T ss_dssp ECSCCGGGS------CCCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred eccCCccCC------CCCCCCEEEeCCCC-CCCccHHHHHHHHHHHHHHHHHhhcCCcEEE
Confidence 667 98874 35689999998422 2111 11111 25666779999999 666
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.83 E-value=7.9e-06 Score=79.81 Aligned_cols=105 Identities=15% Similarity=0.166 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 295 LMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
+.++.+|||+||++|.++..+++. |+..|+|+|+...+...... .... ..++......+.-.
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~---------------~~~iv~~~~~~di~- 141 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTL---------------GWNIVKFKDKSNVF- 141 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBT---------------TGGGEEEECSCCTT-
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cccc---------------CCceEEeecCceee-
Confidence 467899999999999999999975 77889999997532100000 0000 11233233222211
Q ss_pred cccCCCCCceeEEEeccccccccChhh-----HHHHHHHHhccccCC-cEEecc
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESM-----LSSVLFARDQWLKPG-GAILPD 421 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~-----l~~vL~~~~r~Lkpg-G~li~~ 421 (497)
.+.+.++|+|+|..... ..... ...+|.-+.++|+|| |.++.-
T Consensus 142 ---~l~~~~~DlVlsD~APn--sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 142 ---TMPTEPSDTLLCDIGES--SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp ---TSCCCCCSEEEECCCCC--CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred ---ecCCCCcCEEeecCcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 24568899999975333 11111 123467778999999 999844
No 294
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.79 E-value=4.7e-05 Score=77.81 Aligned_cols=107 Identities=14% Similarity=0.084 Sum_probs=66.6
Q ss_pred CCEEEEEcCCCCHhHHHHHHc------------------CCCEEEEEeCC-----------HHHHHHHHHHHHhCCCCCC
Q 010913 298 GAVVMDIGCGTGILSLFAAQA------------------GASRVIAVEAS-----------EKMAAVATQIAKDNDFWWD 348 (497)
Q Consensus 298 ~~~VLDvGCGtG~ls~~la~~------------------G~~~V~gvD~S-----------~~~i~~A~~~~~~~gl~~~ 348 (497)
..+|+|+|||+|..++.+... +.-+|+..|+. +.+.+.+++ ..|-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~--- 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGR--- 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCC---
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccC---
Confidence 579999999999988876654 11378888987 444433222 2221
Q ss_pred CCCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccccccccCh------------------------------
Q 010913 349 RPQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYE------------------------------ 398 (497)
Q Consensus 349 ~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~------------------------------ 398 (497)
..+..|+.|....+-. ..+|.+++|+|+|+...+.+...
T Consensus 127 ----------~~~~~f~~gvpgSFy~-rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~a 195 (384)
T 2efj_A 127 ----------KIGSCLIGAMPGSFYS-RLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKA 195 (384)
T ss_dssp ----------CTTSEEEEECCSCTTS-CCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHH
T ss_pred ----------CCCceEEEecchhhhh-ccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHH
Confidence 0123455554433321 13789999999997633322211
Q ss_pred ------hhHHHHHHHHhccccCCcEEecc
Q 010913 399 ------SMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 399 ------~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.++..+|..+.+.|+|||++++.
T Consensus 196 y~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~ 224 (384)
T 2efj_A 196 YLDQFTKDFTTFLRIHSEELISRGRMLLT 224 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEE
Confidence 12334588889999999999843
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.74 E-value=8.5e-05 Score=79.45 Aligned_cols=94 Identities=16% Similarity=0.055 Sum_probs=66.4
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc----C----------CCEEEEEeCCHHHHHHHHHHHHhCCCCCCC
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA----G----------ASRVIAVEASEKMAAVATQIAKDNDFWWDR 349 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~----G----------~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~ 349 (497)
...+.|.......++.+|+|-+||||.+.+.+.+. + ...++|+|+++.+...|+-++--.|+
T Consensus 204 ~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~---- 279 (530)
T 3ufb_A 204 PVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL---- 279 (530)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC----
Confidence 44555555556678889999999999998877653 1 13699999999999999988777665
Q ss_pred CCCCCCCCCCCceEEEecchhhcccccCCCCCceeEEEeccc
Q 010913 350 PQSEGNINNAGKMEVVQGMVEELGESMQIQPHSVDVLVSEWM 391 (497)
Q Consensus 350 ~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~ 391 (497)
+...+..+|.............+||+|+++++
T Consensus 280 ----------~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPP 311 (530)
T 3ufb_A 280 ----------EYPRIDPENSLRFPLREMGDKDRVDVILTNPP 311 (530)
T ss_dssp ----------SCCEEECSCTTCSCGGGCCGGGCBSEEEECCC
T ss_pred ----------ccccccccccccCchhhhcccccceEEEecCC
Confidence 23456677765432111123457999999975
No 296
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.73 E-value=5.2e-05 Score=66.46 Aligned_cols=47 Identities=13% Similarity=0.222 Sum_probs=37.0
Q ss_pred HHHHHHHhCCCCCCCCEEEEEcCCCC-HhHHHHHH-cCCCEEEEEeCCHHHH
Q 010913 284 SYRQAILENPSLMKGAVVMDIGCGTG-ILSLFAAQ-AGASRVIAVEASEKMA 333 (497)
Q Consensus 284 ~y~~~i~~~~~~~~~~~VLDvGCGtG-~ls~~la~-~G~~~V~gvD~S~~~i 333 (497)
.+..+|.+.. .++.+|||||||.| ..+..|++ .|. .|+|+|+++..+
T Consensus 24 ~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av 72 (153)
T 2k4m_A 24 DLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHG 72 (153)
T ss_dssp HHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSST
T ss_pred HHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCcccc
Confidence 4555555543 45689999999999 59999997 788 899999998544
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.62 E-value=8.3e-05 Score=73.49 Aligned_cols=47 Identities=32% Similarity=0.375 Sum_probs=43.5
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhC
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN 343 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~ 343 (497)
.+|.+|||++||+|..++.+++.|. +++|+|+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999987 9999999999999999998653
No 298
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.56 E-value=6.7e-05 Score=76.05 Aligned_cols=112 Identities=15% Similarity=0.184 Sum_probs=69.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHc------------C-----CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQA------------G-----ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINN 358 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~------------G-----~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~ 358 (497)
...-+|+|+||++|..++.+... | .-+|+..|+..+....+-+.+.. +. .
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~--~~-----------~ 116 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPI--EN-----------D 116 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTT--SC-----------S
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcch--hc-----------c
Confidence 34578999999999876654332 2 13788999887766544333211 10 0
Q ss_pred CCceEEEecchhhcccccCCCCCceeEEEeccccccccC------------------------------hhhHHHHHHHH
Q 010913 359 AGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLY------------------------------ESMLSSVLFAR 408 (497)
Q Consensus 359 ~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~------------------------------~~~l~~vL~~~ 408 (497)
..+..|+.|....+-. ..+|.+++|+|+|+...+.+.. ..++..+|..+
T Consensus 117 ~~~~~f~~gvpgSFy~-rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~R 195 (359)
T 1m6e_X 117 VDGVCFINGVPGSFYG-RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCR 195 (359)
T ss_dssp CTTCEEEEEEESCSSS-CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEecchhhhh-ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123444443333211 2488999999999753222211 23556779999
Q ss_pred hccccCCcEEecc
Q 010913 409 DQWLKPGGAILPD 421 (497)
Q Consensus 409 ~r~LkpgG~li~~ 421 (497)
.+.|+|||++++.
T Consensus 196 a~EL~pGG~mvl~ 208 (359)
T 1m6e_X 196 AQEVVPGGRMVLT 208 (359)
T ss_dssp HHHBCTTCEEEEE
T ss_pred HHHhcCCceEEEE
Confidence 9999999999843
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.23 E-value=0.00041 Score=69.12 Aligned_cols=85 Identities=18% Similarity=0.308 Sum_probs=64.5
Q ss_pred HHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 287 QAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 287 ~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G-~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
+.++..+.+.+|.+++|..||.|..|..+++. | ..+|+|+|.++.+++.|+ ++ . .+++++
T Consensus 47 ~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~---------------~~Rv~l 108 (347)
T 3tka_A 47 DEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D---------------DPRFSI 108 (347)
T ss_dssp HHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C---------------CTTEEE
T ss_pred HHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c---------------CCcEEE
Confidence 33455556788999999999999999999987 4 469999999999998773 22 1 258999
Q ss_pred EecchhhcccccCCC--CCceeEEEec
Q 010913 365 VQGMVEELGESMQIQ--PHSVDVLVSE 389 (497)
Q Consensus 365 i~gd~~~l~~~l~~~--~~~fDvIvs~ 389 (497)
++++..++...++-. .+++|.|+..
T Consensus 109 v~~nF~~l~~~L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 109 IHGPFSALGEYVAERDLIGKIDGILLD 135 (347)
T ss_dssp EESCGGGHHHHHHHTTCTTCEEEEEEE
T ss_pred EeCCHHHHHHHHHhcCCCCcccEEEEC
Confidence 999998875332211 1369999965
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.21 E-value=0.00052 Score=66.39 Aligned_cols=49 Identities=16% Similarity=0.271 Sum_probs=43.6
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCC
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDF 345 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl 345 (497)
.+|.+|||.+||+|..++.+++.|. +++|+|+++.+++.|+++++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhccC
Confidence 6789999999999999999999987 999999999999999999987654
No 301
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.21 E-value=0.00021 Score=69.60 Aligned_cols=103 Identities=9% Similarity=-0.006 Sum_probs=73.2
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
.+..+||+-+|||.+++.+.+. ..+++.||.++..++..++++.. .++++++++|+...-..+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~----------------~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF----------------NKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT----------------TSCEEEECSCHHHHHHHH
T ss_pred cCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc----------------CCcEEEEeCcHHHHHHHh
Confidence 3567899999999999999985 47999999999888766665432 257999999975532111
Q ss_pred CCCCCceeEEEeccccccccChhhHHHHHHHHhc--cccCCcEEe
Q 010913 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQ--WLKPGGAIL 419 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r--~LkpgG~li 419 (497)
.-+..+||+|+..+. |.. ......++..+.+ .+.|+|+++
T Consensus 154 ~~~~~~fdLVfiDPP-Ye~--k~~~~~vl~~L~~~~~r~~~Gi~v 195 (283)
T 2oo3_A 154 LPPPEKRGLIFIDPS-YER--KEEYKEIPYAIKNAYSKFSTGLYC 195 (283)
T ss_dssp CSCTTSCEEEEECCC-CCS--TTHHHHHHHHHHHHHHHCTTSEEE
T ss_pred cCCCCCccEEEECCC-CCC--CcHHHHHHHHHHHhCccCCCeEEE
Confidence 123457999998762 221 2355666666544 567999987
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.98 E-value=0.0012 Score=66.84 Aligned_cols=60 Identities=12% Similarity=0.118 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
++..|||||.|.|.+|..+++. .+++|++||+++.++...++.. .. ++++++.+|+..++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~----------------~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG----------------SPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT----------------SSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC----------------CCEEEEECCccchh
Confidence 4689999999999999999986 4569999999999998887765 21 58999999997653
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.84 E-value=0.0021 Score=62.41 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=61.9
Q ss_pred CCCCCCCEEEEEcC------CCCHhHHHHHHcCC--CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEE
Q 010913 293 PSLMKGAVVMDIGC------GTGILSLFAAQAGA--SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEV 364 (497)
Q Consensus 293 ~~~~~~~~VLDvGC------GtG~ls~~la~~G~--~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~ 364 (497)
...+.|.+|||+|+ -+|. ..+.+.+. ..|+++|+.+-.. . .. .+
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s----------d---------------a~-~~ 156 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS----------D---------------AD-ST 156 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC----------S---------------SS-EE
T ss_pred EeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc----------C---------------CC-eE
Confidence 45678999999997 4555 34444433 2999999987211 0 12 45
Q ss_pred EecchhhcccccCCCCCceeEEEeccc----ccccc----ChhhHHHHHHHHhccccCCcEEe
Q 010913 365 VQGMVEELGESMQIQPHSVDVLVSEWM----GYCLL----YESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 365 i~gd~~~l~~~l~~~~~~fDvIvs~~~----~~~l~----~~~~l~~vL~~~~r~LkpgG~li 419 (497)
++||...+. ...+||+|+|... +..-. ...-...++.-+.++|+|||.++
T Consensus 157 IqGD~~~~~-----~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFv 214 (344)
T 3r24_A 157 LIGDCATVH-----TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIA 214 (344)
T ss_dssp EESCGGGEE-----ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEE
T ss_pred EEccccccc-----cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEE
Confidence 999987753 3588999999741 22100 01124566677789999999998
No 304
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.74 E-value=0.0038 Score=63.26 Aligned_cols=97 Identities=24% Similarity=0.290 Sum_probs=65.5
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec-
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG- 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g- 367 (497)
....+.+|.+||-+|||. |.++..+|++ |+.+|+++|.++..++.|++. |. + .++..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga--------------~--~vi~~~ 243 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GA--------------T--HVINSK 243 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TC--------------S--EEEETT
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CC--------------C--EEecCC
Confidence 455678899999999986 7788888887 887899999999888777643 32 1 11221
Q ss_pred --ch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 368 --MV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 368 --d~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
++ ..+. ....+.+|+|+-.. + . ...+....+.|+|||+++
T Consensus 244 ~~~~~~~~~---~~~~gg~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv 286 (371)
T 1f8f_A 244 TQDPVAAIK---EITDGGVNFALEST-G----S----PEILKQGVDALGILGKIA 286 (371)
T ss_dssp TSCHHHHHH---HHTTSCEEEEEECS-C----C----HHHHHHHHHTEEEEEEEE
T ss_pred ccCHHHHHH---HhcCCCCcEEEECC-C----C----HHHHHHHHHHHhcCCEEE
Confidence 11 1111 11123799999542 1 1 245677788999999987
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.38 E-value=0.0057 Score=62.36 Aligned_cols=73 Identities=26% Similarity=0.175 Sum_probs=56.1
Q ss_pred CEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc-c-
Q 010913 299 AVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES-M- 376 (497)
Q Consensus 299 ~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~-l- 376 (497)
.+|||+.||.|.+++.+.++|+..|.|+|+++.+++..+.+. ....++.+|+.++... +
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~-------------------~~~~~~~~DI~~~~~~~~~ 63 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF-------------------PRSLHVQEDVSLLNAEIIK 63 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC-------------------TTSEEECCCGGGCCHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC-------------------CCCceEecChhhcCHHHHH
Confidence 479999999999999999999988889999998877666553 3457788998876411 0
Q ss_pred --CCCCCceeEEEecc
Q 010913 377 --QIQPHSVDVLVSEW 390 (497)
Q Consensus 377 --~~~~~~fDvIvs~~ 390 (497)
.+....+|+|+..+
T Consensus 64 ~~~~~~~~~D~i~ggp 79 (376)
T 3g7u_A 64 GFFKNDMPIDGIIGGP 79 (376)
T ss_dssp HHHCSCCCCCEEEECC
T ss_pred hhcccCCCeeEEEecC
Confidence 01346799999765
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.21 E-value=0.0034 Score=63.21 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=55.0
Q ss_pred CCEEEEEcCCCCHhHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 298 GAVVMDIGCGTGILSLFAAQAG--ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 298 ~~~VLDvGCGtG~ls~~la~~G--~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
..+|||+.||.|.+++.+.++| +..|+++|+++.+++..+.+. +...++.+|+.++...
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~-------------------~~~~~~~~Di~~~~~~ 62 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF-------------------PHTQLLAKTIEGITLE 62 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-------------------TTSCEECSCGGGCCHH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc-------------------cccccccCCHHHccHh
Confidence 3589999999999999999999 558999999998888777664 2335678898876410
Q ss_pred cCCCCCceeEEEecc
Q 010913 376 MQIQPHSVDVLVSEW 390 (497)
Q Consensus 376 l~~~~~~fDvIvs~~ 390 (497)
.++...+|+|+..+
T Consensus 63 -~~~~~~~D~l~~gp 76 (343)
T 1g55_A 63 -EFDRLSFDMILMSP 76 (343)
T ss_dssp -HHHHHCCSEEEECC
T ss_pred -HcCcCCcCEEEEcC
Confidence 01112589999765
No 307
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.19 E-value=0.011 Score=59.04 Aligned_cols=71 Identities=21% Similarity=0.251 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
..+.+|+|+.||.|.+++.+.++|+..|.++|+++.+++..+.+... .. .+|+.++...
T Consensus 9 ~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~------------------~~---~~Di~~~~~~ 67 (327)
T 2c7p_A 9 LTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGE------------------KP---EGDITQVNEK 67 (327)
T ss_dssp TTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSC------------------CC---BSCGGGSCGG
T ss_pred cCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC------------------CC---cCCHHHcCHh
Confidence 34679999999999999999999998899999999888877776521 11 5788776421
Q ss_pred cCCCCCceeEEEecc
Q 010913 376 MQIQPHSVDVLVSEW 390 (497)
Q Consensus 376 l~~~~~~fDvIvs~~ 390 (497)
.-..+|+|+..+
T Consensus 68 ---~~~~~D~l~~gp 79 (327)
T 2c7p_A 68 ---TIPDHDILCAGF 79 (327)
T ss_dssp ---GSCCCSEEEEEC
T ss_pred ---hCCCCCEEEECC
Confidence 123589999754
No 308
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.16 E-value=0.0078 Score=60.09 Aligned_cols=100 Identities=18% Similarity=0.134 Sum_probs=63.9
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
....+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++.-.+.+++ .|. + .++...
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa--------------~--~~i~~~ 218 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGA--------------E--VAVNAR 218 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTC--------------S--EEEETT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCC--------------C--EEEeCC
Confidence 345678899999999986 8888888887 88 99999999987776654 342 1 112111
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
-.++...+.-..+.+|+|+-.. + -...+....++|+|||+++.
T Consensus 219 ~~~~~~~~~~~~g~~d~vid~~-g--------~~~~~~~~~~~l~~~G~iv~ 261 (340)
T 3s2e_A 219 DTDPAAWLQKEIGGAHGVLVTA-V--------SPKAFSQAIGMVRRGGTIAL 261 (340)
T ss_dssp TSCHHHHHHHHHSSEEEEEESS-C--------CHHHHHHHHHHEEEEEEEEE
T ss_pred CcCHHHHHHHhCCCCCEEEEeC-C--------CHHHHHHHHHHhccCCEEEE
Confidence 1111000000113689988532 1 13456677789999999884
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.15 E-value=0.0068 Score=62.05 Aligned_cols=105 Identities=19% Similarity=0.175 Sum_probs=64.7
Q ss_pred CCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec---
Q 010913 293 PSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG--- 367 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g--- 367 (497)
..+.+|.+||-+|||. |.++..+|++ |+.+|+++|.++..++.+++ .|. .++..
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa-----------------~~i~~~~~ 239 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF-----------------ETIDLRNS 239 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC-----------------EEEETTSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC-----------------cEEcCCCc
Confidence 4567899999999986 7888888886 88799999999987766553 332 22221
Q ss_pred c--hhhcccccCCCCCceeEEEeccccccccC-----hhhHHHHHHHHhccccCCcEEec
Q 010913 368 M--VEELGESMQIQPHSVDVLVSEWMGYCLLY-----ESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 368 d--~~~l~~~l~~~~~~fDvIvs~~~~~~l~~-----~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+ ...+.. + .....+|+|+-..-+....+ .......+....++|+|||+++.
T Consensus 240 ~~~~~~~~~-~-~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 240 APLRDQIDQ-I-LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp SCHHHHHHH-H-HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred chHHHHHHH-H-hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 1 111110 0 12336999995421110000 00122356777889999999873
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.10 E-value=0.01 Score=60.17 Aligned_cols=100 Identities=23% Similarity=0.361 Sum_probs=64.9
Q ss_pred CCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe---
Q 010913 292 NPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ--- 366 (497)
Q Consensus 292 ~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~--- 366 (497)
...+.+|.+||-+|+|. |.++..+|++ |+.+|++++.++.-.+.+++. |. + .++.
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga--------------~--~vi~~~~ 236 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GA--------------T--ATVDPSA 236 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TC--------------S--EEECTTS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CC--------------C--EEECCCC
Confidence 34567899999999875 7778888887 888999999999877776653 32 1 1121
Q ss_pred cchh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 367 GMVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 367 gd~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.++. .+........+.+|+|+-.. + . ...+....++|+|||.++.
T Consensus 237 ~~~~~~i~~~~~~~~gg~Dvvid~~-G----~----~~~~~~~~~~l~~~G~vv~ 282 (370)
T 4ej6_A 237 GDVVEAIAGPVGLVPGGVDVVIECA-G----V----AETVKQSTRLAKAGGTVVI 282 (370)
T ss_dssp SCHHHHHHSTTSSSTTCEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred cCHHHHHHhhhhccCCCCCEEEECC-C----C----HHHHHHHHHHhccCCEEEE
Confidence 1211 11100002234899999532 1 1 2356677789999999883
No 311
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.03 E-value=0.012 Score=59.17 Aligned_cols=98 Identities=21% Similarity=0.267 Sum_probs=62.3
Q ss_pred CCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc---
Q 010913 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM--- 368 (497)
Q Consensus 294 ~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd--- 368 (497)
.+.+|.+||-+|+|. |.++..+|++ |+.+|+++|.++.-.+.+++ .|. + .++..+
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~--~vi~~~~~~ 227 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGA--------------D--LVLQISKES 227 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC--------------S--EEEECSSCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCC--------------C--EEEcCcccc
Confidence 567899999999875 7778888886 88799999999987766653 343 1 222211
Q ss_pred hhhccccc-CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 369 VEELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 369 ~~~l~~~l-~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
..++...+ ......+|+|+-.. + . ...+....++|+|||+++.
T Consensus 228 ~~~~~~~i~~~~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 228 PQEIARKVEGQLGCKPEVTIECT-G----A----EASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp HHHHHHHHHHHHTSCCSEEEECS-C----C----HHHHHHHHHHSCTTCEEEE
T ss_pred cchHHHHHHHHhCCCCCEEEECC-C----C----hHHHHHHHHHhcCCCEEEE
Confidence 11110000 01115699999542 1 1 2345666789999999883
No 312
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.96 E-value=0.041 Score=55.08 Aligned_cols=136 Identities=13% Similarity=0.181 Sum_probs=84.8
Q ss_pred hhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCC-------CCCCCC
Q 010913 280 VRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDF-------WWDRPQ 351 (497)
Q Consensus 280 ~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl-------~~~~~~ 351 (497)
.|+..+.+.+...+...+...|+.+|||.......+... +..+++-||. |.+++.-++.+...+. ......
T Consensus 80 ~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~ 158 (334)
T 1rjd_A 80 LRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTA 158 (334)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhccccccccc
Confidence 566666555544322235689999999999998888874 3338888898 7777777777665420 000000
Q ss_pred CCCCCCCCCceEEEecchhhccc------ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 352 SEGNINNAGKMEVVQGMVEELGE------SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 352 ~~~~~~~~~~i~~i~gd~~~l~~------~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.......+++.+++.+|+.+... ..+ ......+++++.+... +.+.....+|..+.+.+ |+|.++
T Consensus 159 ~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~Y-L~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 159 KSPFLIDQGRYKLAACDLNDITETTRLLDVCT-KREIPTIVISECLLCY-MHNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp CTTEEEECSSEEEEECCTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGG-SCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred ccccccCCCceEEEecCCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhC-CCHHHHHHHHHHHHhhC-CCcEEE
Confidence 00001123678999999987431 122 3456889998875443 34567788888888776 677654
No 313
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.92 E-value=0.013 Score=59.38 Aligned_cols=99 Identities=24% Similarity=0.299 Sum_probs=65.3
Q ss_pred HHhCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 289 ILENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
+.....+.+|.+||-+|+|. |.++..+|++ |+.+|+++|.++.-++.|+ ..|. + .++.
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lGa--------------~--~vi~ 244 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFGV--------------N--EFVN 244 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTTC--------------C--EEEC
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCC--------------c--EEEc
Confidence 44556778899999999975 7788888887 9888999999987776655 3343 1 1221
Q ss_pred c-----chh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCC-cEEe
Q 010913 367 G-----MVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAIL 419 (497)
Q Consensus 367 g-----d~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg-G~li 419 (497)
. ++. .+. ....+.+|+|+-.. + . ...+....+.|+|| |+++
T Consensus 245 ~~~~~~~~~~~i~---~~~~gg~D~vid~~-g----~----~~~~~~~~~~l~~g~G~iv 292 (378)
T 3uko_A 245 PKDHDKPIQEVIV---DLTDGGVDYSFECI-G----N----VSVMRAALECCHKGWGTSV 292 (378)
T ss_dssp GGGCSSCHHHHHH---HHTTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEE
T ss_pred cccCchhHHHHHH---HhcCCCCCEEEECC-C----C----HHHHHHHHHHhhccCCEEE
Confidence 1 111 111 11234799999542 1 1 34567778899997 9987
No 314
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.81 E-value=0.024 Score=58.40 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=51.3
Q ss_pred CCCCCEEEEEcCCCCHhHHHHH-Hc-C-CCEEEEEeCCHHHHHHHHHHHHh--CCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 295 LMKGAVVMDIGCGTGILSLFAA-QA-G-ASRVIAVEASEKMAAVATQIAKD--NDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~ls~~la-~~-G-~~~V~gvD~S~~~i~~A~~~~~~--~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
+.++.+|+||||+.|..+..++ +. | ..+|+++|+++...+..++++.. |+.. ..+++++..-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~------------~~~v~~~~~al 291 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNF------------ASRITVHGCGA 291 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTT------------GGGEEEECSEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCC------------CCCEEEEEeEE
Confidence 4688999999999999999888 44 3 36999999999999999999987 4321 14788777655
Q ss_pred hh
Q 010913 370 EE 371 (497)
Q Consensus 370 ~~ 371 (497)
.+
T Consensus 292 ~~ 293 (409)
T 2py6_A 292 GE 293 (409)
T ss_dssp CS
T ss_pred EC
Confidence 43
No 315
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.77 E-value=0.021 Score=57.50 Aligned_cols=100 Identities=20% Similarity=0.224 Sum_probs=65.9
Q ss_pred CCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe---
Q 010913 292 NPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ--- 366 (497)
Q Consensus 292 ~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~--- 366 (497)
...+.+|.+||-+|+|. |.++..+|++ |+..|+++|.++.-.+.+++. .. ..+.+..
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-----------------~~~~~~~~~~ 235 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-----------------EVVTHKVERL 235 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-----------------TCEEEECCSC
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-----------------hccccccccc
Confidence 34567899999999975 7788888887 886699999999988888765 21 1222221
Q ss_pred --cch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 367 --GMV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 367 --gd~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.++ ..+.. ......+|+|+-.. + . ...+....++|+|||+++.
T Consensus 236 ~~~~~~~~v~~--~t~g~g~Dvvid~~-g----~----~~~~~~~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 236 SAEESAKKIVE--SFGGIEPAVALECT-G----V----ESSIAAAIWAVKFGGKVFV 281 (363)
T ss_dssp CHHHHHHHHHH--HTSSCCCSEEEECS-C----C----HHHHHHHHHHSCTTCEEEE
T ss_pred chHHHHHHHHH--HhCCCCCCEEEECC-C----C----hHHHHHHHHHhcCCCEEEE
Confidence 111 11110 02345799999542 1 1 2356667789999999883
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.75 E-value=0.015 Score=58.42 Aligned_cols=98 Identities=23% Similarity=0.329 Sum_probs=64.6
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec-
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG- 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g- 367 (497)
....+.+|.+||-+|+|. |.++..+|++ |+.+|+++|.++.-++.+++. |. + .++..
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga--------------~--~vi~~~ 219 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GA--------------T--DIINYK 219 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TC--------------C--EEECGG
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CC--------------c--eEEcCC
Confidence 345668899999999886 7788888887 887899999999877777654 32 1 22221
Q ss_pred --chh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 368 --MVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 368 --d~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
++. .+.. ......+|+|+-.. + . ...+....++|+|||+++
T Consensus 220 ~~~~~~~v~~--~t~g~g~D~v~d~~-g----~----~~~~~~~~~~l~~~G~~v 263 (352)
T 3fpc_A 220 NGDIVEQILK--ATDGKGVDKVVIAG-G----D----VHTFAQAVKMIKPGSDIG 263 (352)
T ss_dssp GSCHHHHHHH--HTTTCCEEEEEECS-S----C----TTHHHHHHHHEEEEEEEE
T ss_pred CcCHHHHHHH--HcCCCCCCEEEECC-C----C----hHHHHHHHHHHhcCCEEE
Confidence 111 1110 02344799999532 1 1 135566678999999988
No 317
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=95.74 E-value=0.0097 Score=42.26 Aligned_cols=52 Identities=23% Similarity=0.347 Sum_probs=41.9
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
.+..|-.|++.|.+...+..||+..++- ....|..|+..|.....|..||..
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~H~~~ 54 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRTHTGE---------------------------KPYKCEFCEYAAAQKTSLRYHLER 54 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHHHHCC---------------------------CCEECSSSSCEESSHHHHHHHHHH
T ss_pred CCccCCCCcchhCChHHHHHHHHHcCCC---------------------------CCcCCCCCcchhCCHHHHHHHHHH
Confidence 4679999999999999999999864431 113599999999999999999974
No 318
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.64 E-value=0.028 Score=56.81 Aligned_cols=97 Identities=21% Similarity=0.224 Sum_probs=63.6
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec-
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG- 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g- 367 (497)
....+.+|.+||-+|+|. |.++..+|++ |+.+|++++.++.-++.+++ .|. + .++..
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~--~vi~~~ 244 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGA--------------T--ECLNPK 244 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTC--------------S--EEECGG
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCC--------------c--EEEecc
Confidence 445678899999999875 7777888887 88789999999877766653 343 1 11211
Q ss_pred ----chh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCC-cEEe
Q 010913 368 ----MVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAIL 419 (497)
Q Consensus 368 ----d~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg-G~li 419 (497)
++. .+. ....+.+|+|+-.. + . ...+....++|+|+ |.++
T Consensus 245 ~~~~~~~~~i~---~~t~gg~Dvvid~~-g----~----~~~~~~~~~~l~~~~G~iv 290 (373)
T 1p0f_A 245 DYDKPIYEVIC---EKTNGGVDYAVECA-G----R----IETMMNALQSTYCGSGVTV 290 (373)
T ss_dssp GCSSCHHHHHH---HHTTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEE
T ss_pred cccchHHHHHH---HHhCCCCCEEEECC-C----C----HHHHHHHHHHHhcCCCEEE
Confidence 111 111 01124799999532 1 1 23566777899999 9987
No 319
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.62 E-value=0.033 Score=56.18 Aligned_cols=99 Identities=23% Similarity=0.305 Sum_probs=64.5
Q ss_pred HhCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 290 LENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 290 ~~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
.....+.+|.+||-+|+|. |.++..+|++ |+.+|++++.++.-++.+++. |. + .++..
T Consensus 183 ~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga--------------~--~vi~~ 242 (373)
T 2fzw_A 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GA--------------T--ECINP 242 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TC--------------S--EEECG
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CC--------------c--eEecc
Confidence 3445678899999999875 6777788876 887899999999877777643 32 1 11211
Q ss_pred -----chh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCC-cEEec
Q 010913 368 -----MVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (497)
Q Consensus 368 -----d~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg-G~li~ 420 (497)
++. .+. ....+.+|+|+-.. + . ...+....++|+|+ |.++.
T Consensus 243 ~~~~~~~~~~v~---~~~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 243 QDFSKPIQEVLI---EMTDGGVDYSFECI-G----N----VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp GGCSSCHHHHHH---HHTTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEE
T ss_pred ccccccHHHHHH---HHhCCCCCEEEECC-C----c----HHHHHHHHHhhccCCcEEEE
Confidence 111 111 01124799999542 1 1 23566778899999 99873
No 320
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.57 E-value=0.018 Score=58.78 Aligned_cols=103 Identities=23% Similarity=0.266 Sum_probs=65.5
Q ss_pred CCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec---
Q 010913 293 PSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG--- 367 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g--- 367 (497)
..+.+|.+||-+|||. |.++..+|++ |+.+|+++|.++.-++.|++ .|. .++..
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa-----------------~~i~~~~~ 239 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF-----------------EIADLSLD 239 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC-----------------EEEETTSS
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC-----------------cEEccCCc
Confidence 4567899999999876 7788888887 88789999999987776654 342 12221
Q ss_pred c--hhhcccccCCCCCceeEEEeccccccc-------cChhhHHHHHHHHhccccCCcEEe
Q 010913 368 M--VEELGESMQIQPHSVDVLVSEWMGYCL-------LYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 368 d--~~~l~~~l~~~~~~fDvIvs~~~~~~l-------~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
+ ...+.. + .....+|+|+-.. +.-- .+.......+....++|++||.++
T Consensus 240 ~~~~~~v~~-~-t~g~g~Dvvid~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv 297 (398)
T 1kol_A 240 TPLHEQIAA-L-LGEPEVDCAVDAV-GFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIG 297 (398)
T ss_dssp SCHHHHHHH-H-HSSSCEEEEEECC-CTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEE
T ss_pred chHHHHHHH-H-hCCCCCCEEEECC-CCcccccccccccccchHHHHHHHHHHHhcCCEEE
Confidence 1 111110 0 1234799999643 2110 011123346777788999999987
No 321
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.53 E-value=0.056 Score=55.30 Aligned_cols=46 Identities=30% Similarity=0.444 Sum_probs=38.3
Q ss_pred CCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHH
Q 010913 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQI 339 (497)
Q Consensus 294 ~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~ 339 (497)
.+.+|.+||-+|+|. |.++..+|++ |+.+|+++|.++.-++.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 678899999999875 6777788877 888999999999888777654
No 322
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.47 E-value=0.051 Score=54.77 Aligned_cols=101 Identities=11% Similarity=0.097 Sum_probs=64.5
Q ss_pred HhCCCCC-----CCCEEEEEc-CCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 010913 290 LENPSLM-----KGAVVMDIG-CGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 290 ~~~~~~~-----~~~~VLDvG-CGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~ 361 (497)
.....+. +|.+||-+| +|. |.++..+|++ +..+|++++.++.-++.+++ .|. +.
T Consensus 159 ~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGa--------------d~ 220 (363)
T 4dvj_A 159 FDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGA--------------HH 220 (363)
T ss_dssp HTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTC--------------SE
T ss_pred HHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCC--------------CE
Confidence 3445555 789999998 554 8888899986 55599999999887776654 343 11
Q ss_pred eEEEecch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 362 MEVVQGMV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 362 i~~i~gd~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+--...++ ..+. ....+.+|+|+-.. + -...+....++|+|||.++.
T Consensus 221 vi~~~~~~~~~v~---~~~~~g~Dvvid~~-g--------~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 221 VIDHSKPLAAEVA---ALGLGAPAFVFSTT-H--------TDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp EECTTSCHHHHHH---TTCSCCEEEEEECS-C--------HHHHHHHHHHHSCTTCEEEE
T ss_pred EEeCCCCHHHHHH---HhcCCCceEEEECC-C--------chhhHHHHHHHhcCCCEEEE
Confidence 11001111 1221 12346899998532 1 13456777889999999884
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.45 E-value=0.012 Score=58.88 Aligned_cols=89 Identities=20% Similarity=0.149 Sum_probs=61.6
Q ss_pred CCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 294 ~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
.+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++.-.+.+++ .|. +. ++ .+...
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa--------------~~--v~-~~~~~ 230 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGV--------------KH--FY-TDPKQ 230 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTC--------------SE--EE-SSGGG
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCC--------------Ce--ec-CCHHH
Confidence 668899999999975 7778888887 88 99999999877766654 443 22 22 33333
Q ss_pred cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+ . ..+|+|+-.. + .. ..+....++|+|||.++.
T Consensus 231 ~------~-~~~D~vid~~-g----~~----~~~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 231 C------K-EELDFIISTI-P----TH----YDLKDYLKLLTYNGDLAL 263 (348)
T ss_dssp C------C-SCEEEEEECC-C----SC----CCHHHHHTTEEEEEEEEE
T ss_pred H------h-cCCCEEEECC-C----cH----HHHHHHHHHHhcCCEEEE
Confidence 2 2 2799999542 1 11 134556789999999883
No 324
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.44 E-value=0.12 Score=49.62 Aligned_cols=110 Identities=18% Similarity=0.159 Sum_probs=69.2
Q ss_pred CCCEEEEEcCCCCHhHHHHHHc-------C-CCEEEEEeCCHHHH------------------------HHHHHHHH---
Q 010913 297 KGAVVMDIGCGTGILSLFAAQA-------G-ASRVIAVEASEKMA------------------------AVATQIAK--- 341 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~-------G-~~~V~gvD~S~~~i------------------------~~A~~~~~--- 341 (497)
-+..|+++|+-.|..++.++.. + ..+|+++|.-+.+- +..++.+.
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 3569999999999988876653 2 36999999221111 11111111
Q ss_pred ---hCCCCCCCCCCCCCCCCCCceEEEecchhhccccc--CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCc
Q 010913 342 ---DNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGG 416 (497)
Q Consensus 342 ---~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l--~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG 416 (497)
..+. ..++|+++.|++.+.-..+ ..+..++|+|+... - .+. .....+..+...|+|||
T Consensus 149 ~~~~~g~------------~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~---D-~Y~-~t~~~le~~~p~l~~GG 211 (257)
T 3tos_A 149 CSDFFGH------------VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL---D-LYE-PTKAVLEAIRPYLTKGS 211 (257)
T ss_dssp TTSTTTT------------SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC---C-CHH-HHHHHHHHHGGGEEEEE
T ss_pred hhhhcCC------------CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC---c-ccc-hHHHHHHHHHHHhCCCc
Confidence 1121 1378999999997752110 02455799999653 2 233 33457888899999999
Q ss_pred EEeccCc
Q 010913 417 AILPDTA 423 (497)
Q Consensus 417 ~li~~~~ 423 (497)
+|+++..
T Consensus 212 vIv~DD~ 218 (257)
T 3tos_A 212 IVAFDEL 218 (257)
T ss_dssp EEEESST
T ss_pred EEEEcCC
Confidence 9996654
No 325
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.44 E-value=0.027 Score=56.73 Aligned_cols=98 Identities=23% Similarity=0.246 Sum_probs=62.9
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
....+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++.-++.+++. |. + .++..+
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~--~vi~~~ 241 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFAL----GA--------------D--HGINRL 241 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TC--------------S--EEEETT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHc----CC--------------C--EEEcCC
Confidence 456778999999999875 7777788877 88 999999999877776553 32 1 122211
Q ss_pred hhhccccc-C-CCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 369 VEELGESM-Q-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 369 ~~~l~~~l-~-~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
..++...+ . .....+|+|+-.. + . ..+....++|+|||.++
T Consensus 242 ~~~~~~~v~~~~~g~g~D~vid~~-g-----~----~~~~~~~~~l~~~G~iv 284 (363)
T 3uog_A 242 EEDWVERVYALTGDRGADHILEIA-G-----G----AGLGQSLKAVAPDGRIS 284 (363)
T ss_dssp TSCHHHHHHHHHTTCCEEEEEEET-T-----S----SCHHHHHHHEEEEEEEE
T ss_pred cccHHHHHHHHhCCCCceEEEECC-C-----h----HHHHHHHHHhhcCCEEE
Confidence 11110000 0 1234799999542 1 1 13455667899999988
No 326
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.41 E-value=0.017 Score=58.51 Aligned_cols=95 Identities=24% Similarity=0.201 Sum_probs=61.1
Q ss_pred CCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh
Q 010913 293 PSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~ 370 (497)
..+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++.-++.+++. |. + .++...-.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l----Ga--------------~--~vi~~~~~ 248 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL----GA--------------D--EVVNSRNA 248 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TC--------------S--EEEETTCH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC--------------c--EEeccccH
Confidence 3567899999999985 7778888876 88 799999998877777652 32 1 12221111
Q ss_pred hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 371 ~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+... .+. ..+|+|+... + .. ..+....+.|+|+|.++.
T Consensus 249 ~~~~--~~~-~g~Dvvid~~-g----~~----~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 249 DEMA--AHL-KSFDFILNTV-A----AP----HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp HHHH--TTT-TCEEEEEECC-S----SC----CCHHHHHTTEEEEEEEEE
T ss_pred HHHH--Hhh-cCCCEEEECC-C----CH----HHHHHHHHHhccCCEEEE
Confidence 1110 112 5799999542 1 11 134556689999999873
No 327
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.40 E-value=0.032 Score=56.41 Aligned_cols=98 Identities=19% Similarity=0.265 Sum_probs=63.5
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec-
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG- 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g- 367 (497)
....+.+|.+||-+|+|. |.++..+|++ |+.+|++++.++.-++.+++ .|. + .++..
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~--~vi~~~ 245 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGA--------------T--DFVNPN 245 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--------------C--EEECGG
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCC--------------c--eEEecc
Confidence 445678899999999875 6777788876 88789999999887776653 343 1 11211
Q ss_pred ----chhh-cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCC-cEEec
Q 010913 368 ----MVEE-LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (497)
Q Consensus 368 ----d~~~-l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg-G~li~ 420 (497)
++.+ +. ....+.+|+|+-.. + . ...+....++|+|| |.++.
T Consensus 246 ~~~~~~~~~~~---~~~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 246 DHSEPISQVLS---KMTNGGVDFSLECV-G----N----VGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp GCSSCHHHHHH---HHHTSCBSEEEECS-C----C----HHHHHHHHHTBCTTTCEEEE
T ss_pred ccchhHHHHHH---HHhCCCCCEEEECC-C----C----HHHHHHHHHHhhcCCcEEEE
Confidence 1111 11 01123799999542 1 1 23566777899999 99873
No 328
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.36 E-value=0.035 Score=56.34 Aligned_cols=99 Identities=22% Similarity=0.331 Sum_probs=62.3
Q ss_pred CCC-CCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 292 NPS-LMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 292 ~~~-~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
... +.+|.+||-+|+|. |.++..+|++ |+.+|++++.++.-++.+++ .|. + .++...
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~--~vi~~~ 248 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGA--------------D--LTLNRR 248 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTC--------------S--EEEETT
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCC--------------c--EEEecc
Confidence 456 78899999999764 6777788877 85699999999987766653 343 1 222221
Q ss_pred ---hhhccccc-C-CCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 369 ---VEELGESM-Q-IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 369 ---~~~l~~~l-~-~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
-.++...+ . .....+|+|+-.. + . ...+....++|+|||.++
T Consensus 249 ~~~~~~~~~~v~~~~~g~g~Dvvid~~-g----~----~~~~~~~~~~l~~~G~iv 295 (380)
T 1vj0_A 249 ETSVEERRKAIMDITHGRGADFILEAT-G----D----SRALLEGSELLRRGGFYS 295 (380)
T ss_dssp TSCHHHHHHHHHHHTTTSCEEEEEECS-S----C----TTHHHHHHHHEEEEEEEE
T ss_pred ccCcchHHHHHHHHhCCCCCcEEEECC-C----C----HHHHHHHHHHHhcCCEEE
Confidence 11110000 0 1234699999542 1 1 124556678899999987
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.31 E-value=0.034 Score=56.27 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=63.9
Q ss_pred HhCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 290 LENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 290 ~~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
.....+.+|.+||-+|+|. |.++..+|++ |+.+|+++|.++.-++.+++ .|. + .++..
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa--------------~--~vi~~ 247 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGA--------------T--DCLNP 247 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--------------S--EEECG
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC--------------c--EEEcc
Confidence 3445678899999999875 6777788876 88789999999877766653 343 1 11211
Q ss_pred -----chh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCC-cEEec
Q 010913 368 -----MVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (497)
Q Consensus 368 -----d~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg-G~li~ 420 (497)
++. .+. ....+.+|+|+-.. + . ...+....++|++| |+++.
T Consensus 248 ~~~~~~~~~~v~---~~~~~g~Dvvid~~-G----~----~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 248 RELDKPVQDVIT---ELTAGGVDYSLDCA-G----T----AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp GGCSSCHHHHHH---HHHTSCBSEEEESS-C----C----HHHHHHHHHTBCTTTCEEEE
T ss_pred ccccchHHHHHH---HHhCCCccEEEECC-C----C----HHHHHHHHHHhhcCCCEEEE
Confidence 111 111 01123799999532 1 1 23566778899999 99873
No 330
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.31 E-value=0.039 Score=55.71 Aligned_cols=98 Identities=19% Similarity=0.272 Sum_probs=63.1
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec-
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG- 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g- 367 (497)
....+.+|.+||-+|+|. |.++..+|++ |+.+|++++.++.-++.+++ .|. + .++..
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa--------------~--~vi~~~ 244 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGA--------------T--ECVNPQ 244 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTC--------------S--EEECGG
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCC--------------c--eEeccc
Confidence 445678899999999875 6777778876 88789999999877766653 343 1 11211
Q ss_pred ----chh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCC-cEEec
Q 010913 368 ----MVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPG-GAILP 420 (497)
Q Consensus 368 ----d~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~Lkpg-G~li~ 420 (497)
++. .+. ....+.+|+|+-.. + . ...+....++|+|+ |.++.
T Consensus 245 ~~~~~~~~~~~---~~~~~g~D~vid~~-g----~----~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 245 DYKKPIQEVLT---EMSNGGVDFSFEVI-G----R----LDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp GCSSCHHHHHH---HHTTSCBSEEEECS-C----C----HHHHHHHHHHBCTTTCEEEE
T ss_pred ccchhHHHHHH---HHhCCCCcEEEECC-C----C----HHHHHHHHHHhhcCCcEEEE
Confidence 111 111 01124799999542 1 1 23566677899999 99873
No 331
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=95.31 E-value=0.022 Score=40.33 Aligned_cols=52 Identities=17% Similarity=0.412 Sum_probs=42.3
Q ss_pred CcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 46 GFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 46 ~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
|..|-.|+..|.+...+..|++..++- ....|..|+..|.+...|..||...
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~H~~~h 52 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDV---------------------------RPYHCTYCNFSFKTKGNLTKHMKSK 52 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSC---------------------------CCEECSSSSCEESSHHHHHHHHHSS
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCC---------------------------CCccCCCCCchhcCHHHHHHHHHHh
Confidence 457999999999999999999864431 1135999999999999999998743
No 332
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=95.15 E-value=0.014 Score=42.92 Aligned_cols=55 Identities=18% Similarity=0.336 Sum_probs=44.9
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
.+..|-.|++.|.+...+..|++..|.- + .....|..|+..|.+...|..||...
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~---------~----------------~~~~~C~~C~k~f~~~~~L~~H~~~~ 63 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKR---------N----------------VKVYPCPFCFKEFTRKDNMTAHVKII 63 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSS---------S----------------CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCC---------C----------------CcCeECCCCCCccCCHHHHHHHHHHH
Confidence 4789999999999999999999987741 0 01135999999999999999999754
No 333
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.13 E-value=0.059 Score=53.81 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=62.6
Q ss_pred HHhCCCCC------CCCEEEEEc-CCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 010913 289 ILENPSLM------KGAVVMDIG-CGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNA 359 (497)
Q Consensus 289 i~~~~~~~------~~~~VLDvG-CGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~ 359 (497)
+.....+. +|.+||-+| +|. |.++..++++ |+ +|++++.++.-++.+++. |.
T Consensus 136 l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga-------------- 196 (346)
T 3fbg_A 136 LFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM----GA-------------- 196 (346)
T ss_dssp HHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH----TC--------------
T ss_pred HHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CC--------------
Confidence 33455555 899999994 543 6677777776 88 999999999877777653 32
Q ss_pred CceEEEecch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 360 GKMEVVQGMV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 360 ~~i~~i~gd~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
+.+--...+. ..+. ......+|+|+... + -...+....++|+|+|.++
T Consensus 197 ~~vi~~~~~~~~~~~---~~~~~g~Dvv~d~~-g--------~~~~~~~~~~~l~~~G~iv 245 (346)
T 3fbg_A 197 DIVLNHKESLLNQFK---TQGIELVDYVFCTF-N--------TDMYYDDMIQLVKPRGHIA 245 (346)
T ss_dssp SEEECTTSCHHHHHH---HHTCCCEEEEEESS-C--------HHHHHHHHHHHEEEEEEEE
T ss_pred cEEEECCccHHHHHH---HhCCCCccEEEECC-C--------chHHHHHHHHHhccCCEEE
Confidence 1110001111 1121 12345799999532 1 1345667778999999986
No 334
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.12 E-value=0.018 Score=43.80 Aligned_cols=55 Identities=25% Similarity=0.451 Sum_probs=45.7
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
.+..|-.|++.|.+...+..||+..|.=+ .....|..|+..|.....|..||...
T Consensus 14 k~~~C~~C~k~f~~~~~L~~H~~~~h~~~-------------------------~~~~~C~~C~~~f~~~~~L~~H~~~~ 68 (77)
T 2ct1_A 14 KPYECYICHARFTQSGTMKMHILQKHTEN-------------------------VAKFHCPHCDTVIARKSDLGVHLRKQ 68 (77)
T ss_dssp CSEECTTTCCEESCHHHHHHHHHHHSSSS-------------------------CSSEECSSSSCEESSHHHHHHHHHHT
T ss_pred CCeECCCcCchhCCHHHHHHHHHHhcCCC-------------------------CCccCCCCCCCccCCHHHHHHHHHHh
Confidence 57899999999999999999998777521 01135999999999999999999865
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.12 E-value=0.07 Score=53.09 Aligned_cols=49 Identities=27% Similarity=0.323 Sum_probs=39.1
Q ss_pred HHhCCCCCCCCEEEEEcCCC--CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHH
Q 010913 289 ILENPSLMKGAVVMDIGCGT--GILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCGt--G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~ 338 (497)
+.....+.+|.+||-+|+|. |.++..+++. |+ +|++++.++.-++.+++
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLR 187 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 34556788999999999984 6667777776 98 99999999887777765
No 336
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.04 E-value=0.044 Score=53.84 Aligned_cols=75 Identities=19% Similarity=0.111 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCE--EEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASR--VIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~--V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
..+.+|+|+-||.|.+++.+.++|... |.++|+++.+++..+.+. +...++.+|+.++.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~-------------------~~~~~~~~DI~~i~ 74 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH-------------------QGKIMYVGDVRSVT 74 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT-------------------TTCEEEECCGGGCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC-------------------CCCceeCCChHHcc
Confidence 456799999999999999999999865 799999998776544442 23467789998874
Q ss_pred cc-cCCCCCceeEEEecc
Q 010913 374 ES-MQIQPHSVDVLVSEW 390 (497)
Q Consensus 374 ~~-l~~~~~~fDvIvs~~ 390 (497)
.. ++ ....+|+|+..+
T Consensus 75 ~~~i~-~~~~~Dll~ggp 91 (295)
T 2qrv_A 75 QKHIQ-EWGPFDLVIGGS 91 (295)
T ss_dssp HHHHH-HTCCCSEEEECC
T ss_pred HHHhc-ccCCcCEEEecC
Confidence 21 11 124699999754
No 337
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.95 E-value=0.046 Score=54.61 Aligned_cols=98 Identities=27% Similarity=0.320 Sum_probs=62.2
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec-
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG- 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g- 367 (497)
....+ +|.+||-+|+|. |.++..+|+. |+.+|++++.++.-++.+++. |. + .++..
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga--------------~--~~~~~~ 220 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GA--------------D--YVINPF 220 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TC--------------S--EEECTT
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CC--------------C--EEECCC
Confidence 34566 899999999964 6677777776 877899999998877766643 32 1 11211
Q ss_pred --chh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 368 --MVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 368 --d~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++. .+.. + .....+|+|+... + . ...+....++|+++|.++.
T Consensus 221 ~~~~~~~v~~-~-~~g~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 221 EEDVVKEVMD-I-TDGNGVDVFLEFS-G----A----PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp TSCHHHHHHH-H-TTTSCEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CcCHHHHHHH-H-cCCCCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 111 1110 0 1234699999542 1 1 2356667789999999873
No 338
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.92 E-value=0.024 Score=42.49 Aligned_cols=53 Identities=25% Similarity=0.461 Sum_probs=43.7
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
.+..|-.|++.|.+...+..||+..++- ....|..|+..|.....|..||...
T Consensus 13 k~~~C~~C~k~f~~~~~L~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~L~~H~~~H 65 (72)
T 1x6e_A 13 KPYGCVECGKAFSRSSILVQHQRVHTGE---------------------------KPYKCLECGKAFSQNSGLINHQRIH 65 (72)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHGGGCS---------------------------CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred CCccCCCCCCccCCHHHHHHHHHhcCCC---------------------------CCeECCCCCcccCCHHHHHHHHHhc
Confidence 5789999999999999999999854321 1135999999999999999999754
No 339
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.91 E-value=0.045 Score=54.25 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=52.9
Q ss_pred EEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccCCC
Q 010913 300 VVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQIQ 379 (497)
Q Consensus 300 ~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~~~ 379 (497)
+|||+-||.|.+++.+.++|..-|.++|+++.+++.-+.+. .-.++.+|+.++.. -.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~--------------------~~~~~~~DI~~i~~---~~ 58 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH--------------------SAKLIKGDISKISS---DE 58 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC--------------------CSEEEESCGGGCCG---GG
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC--------------------CCCcccCChhhCCH---hh
Confidence 69999999999999999999988899999997766555442 22578899988752 12
Q ss_pred CCceeEEEecc
Q 010913 380 PHSVDVLVSEW 390 (497)
Q Consensus 380 ~~~fDvIvs~~ 390 (497)
-..+|+|+..+
T Consensus 59 ~~~~D~l~ggp 69 (331)
T 3ubt_Y 59 FPKCDGIIGGP 69 (331)
T ss_dssp SCCCSEEECCC
T ss_pred CCcccEEEecC
Confidence 34689999654
No 340
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.90 E-value=0.024 Score=44.83 Aligned_cols=78 Identities=22% Similarity=0.269 Sum_probs=49.6
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHLH 122 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~~Hm~ 122 (497)
.+..|-.|+..|.+...+..||+..++-.. .....=+.-|...-.|..-++..... ..|..|+..|.+...|..||.
T Consensus 7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 85 (96)
T 2dmd_A 7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR 85 (96)
T ss_dssp CCCCBTTTTBCCCCHHHHHHHGGGCCCCCS-EECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHT
T ss_pred cCeECCCCCCccCCHHHHHHHHHhcCCCCC-EeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence 578999999999999999999996654211 00111111222333344444443222 348889999988888888886
Q ss_pred H
Q 010913 123 E 123 (497)
Q Consensus 123 ~ 123 (497)
.
T Consensus 86 ~ 86 (96)
T 2dmd_A 86 S 86 (96)
T ss_dssp T
T ss_pred H
Confidence 3
No 341
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.89 E-value=0.085 Score=47.87 Aligned_cols=97 Identities=21% Similarity=0.219 Sum_probs=58.2
Q ss_pred hCCCCCCCCEEEEEcCCC--CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe-
Q 010913 291 ENPSLMKGAVVMDIGCGT--GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ- 366 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt--G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~- 366 (497)
....+.+|++||.+|++. |.....+++. |+ +|++++.++...+.+++ .|. .. .+-.
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~--------------~~-~~d~~ 91 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGV--------------EY-VGDSR 91 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCC--------------SE-EEETT
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCC--------------CE-EeeCC
Confidence 345677899999999643 5555555554 88 89999999876655432 332 11 1111
Q ss_pred -cch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 367 -GMV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 367 -gd~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.+. ..+.. ......+|+|+.+. + ...+....+.|+|||+++
T Consensus 92 ~~~~~~~~~~--~~~~~~~D~vi~~~-g---------~~~~~~~~~~l~~~G~~v 134 (198)
T 1pqw_A 92 SVDFADEILE--LTDGYGVDVVLNSL-A---------GEAIQRGVQILAPGGRFI 134 (198)
T ss_dssp CSTHHHHHHH--HTTTCCEEEEEECC-C---------THHHHHHHHTEEEEEEEE
T ss_pred cHHHHHHHHH--HhCCCCCeEEEECC-c---------hHHHHHHHHHhccCCEEE
Confidence 111 11110 01234699999643 2 124667778999999988
No 342
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.85 E-value=0.0083 Score=59.82 Aligned_cols=49 Identities=22% Similarity=0.245 Sum_probs=44.2
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCC
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDF 345 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl 345 (497)
.+|..|||..||+|..+..+.+.|. +.+|+|+++..+..|+++++..+.
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhccc
Confidence 6789999999999999999999987 999999999999999998866553
No 343
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.81 E-value=0.18 Score=49.73 Aligned_cols=130 Identities=11% Similarity=0.047 Sum_probs=83.6
Q ss_pred hhhhHHHHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 010913 279 KVRTDSYRQAILENPSLMKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINN 358 (497)
Q Consensus 279 ~~r~~~y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~ 358 (497)
..|+..+.+++...... ....|++||||-=.....+......+|+=|| -|..++..++.+...+.. .
T Consensus 85 ~~Rt~~~d~~v~~~~~~-g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~-----------~ 151 (310)
T 2uyo_A 85 AVRTNFFDTYFNNAVID-GIRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVT-----------P 151 (310)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCC-----------C
T ss_pred HHHHHHHHHHHHHHHHh-CCCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCC-----------C
Confidence 35555555555443221 1246999999976655544422124899999 588898888888765431 1
Q ss_pred CCceEEEecchhhccc--cc---CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCc
Q 010913 359 AGKMEVVQGMVEELGE--SM---QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTA 423 (497)
Q Consensus 359 ~~~i~~i~gd~~~l~~--~l---~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~ 423 (497)
..+..++.+|+.+ .. .+ .+.....=+++++.+.+.+ .......++..+...+.||+.|+++..
T Consensus 152 ~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl-~~~~~~~ll~~l~~~~~~gs~l~~d~~ 219 (310)
T 2uyo_A 152 TADRREVPIDLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYL-PATAQDGLFTEIGGLSAVGSRIAVETS 219 (310)
T ss_dssp SSEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGS-CHHHHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCCeEEEecchHh-hHHHHHHhccCCCCCCEEEEEechHhhC-CHHHHHHHHHHHHHhCCCCeEEEEEec
Confidence 3578899999875 21 01 1223445577777654444 345778899999999999999986654
No 344
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.80 E-value=0.052 Score=53.85 Aligned_cols=102 Identities=18% Similarity=0.261 Sum_probs=63.0
Q ss_pred HHhCCCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 289 ILENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
+.....+.+|.+||-+|++ .|..+..+++. |+ +|++++.++.-++.+. +..|. + .++
T Consensus 141 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~---~~~g~--------------~--~~~ 200 (336)
T 4b7c_A 141 LLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLV---EELGF--------------D--GAI 200 (336)
T ss_dssp HHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH---HTTCC--------------S--EEE
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH---HHcCC--------------C--EEE
Confidence 3356677899999999983 46667777766 88 9999999987666552 22342 1 111
Q ss_pred ecchhhccccc-CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 366 QGMVEELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 366 ~gd~~~l~~~l-~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
...-.++...+ ....+.+|+|+... + ...+....+.|+|||.++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~d~vi~~~-g---------~~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 201 DYKNEDLAAGLKRECPKGIDVFFDNV-G---------GEILDTVLTRIAFKARIVL 246 (336)
T ss_dssp ETTTSCHHHHHHHHCTTCEEEEEESS-C---------HHHHHHHHTTEEEEEEEEE
T ss_pred ECCCHHHHHHHHHhcCCCceEEEECC-C---------cchHHHHHHHHhhCCEEEE
Confidence 11111110000 01135799999643 1 1256777899999999883
No 345
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.79 E-value=0.024 Score=57.01 Aligned_cols=97 Identities=20% Similarity=0.228 Sum_probs=60.7
Q ss_pred CCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh
Q 010913 293 PSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~ 370 (497)
..+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++.-++.+++. |. + .++...-.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~--~v~~~~~~ 233 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM----GA--------------D--HYIATLEE 233 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TC--------------S--EEEEGGGT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc----CC--------------C--EEEcCcCc
Confidence 4567899999999864 6777778876 88 799999998777776652 32 1 12221111
Q ss_pred -hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 371 -ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 371 -~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++... +. +.+|+|+... +.. . ...+....++|+|||.++.
T Consensus 234 ~~~~~~--~~-~~~D~vid~~-g~~--~----~~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 234 GDWGEK--YF-DTFDLIVVCA-SSL--T----DIDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp SCHHHH--SC-SCEEEEEECC-SCS--T----TCCTTTGGGGEEEEEEEEE
T ss_pred hHHHHH--hh-cCCCEEEECC-CCC--c----HHHHHHHHHHhcCCCEEEE
Confidence 11111 12 5799999542 110 0 1123455689999999873
No 346
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.78 E-value=0.065 Score=53.58 Aligned_cols=96 Identities=24% Similarity=0.318 Sum_probs=60.6
Q ss_pred CCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec---c
Q 010913 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG---M 368 (497)
Q Consensus 294 ~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g---d 368 (497)
.+.+|.+||-+|+|. |.++..+|++ |+ +|++++.++.-++.+++ .|. +.+ +-.. +
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa--------------~~~-~~~~~~~~ 224 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN----CGA--------------DVT-LVVDPAKE 224 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTC--------------SEE-EECCTTTS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH----hCC--------------CEE-EcCccccc
Confidence 567899999999875 6777778876 88 69999999987776653 343 111 1111 1
Q ss_pred -hhhcccccCCC---CCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 369 -VEELGESMQIQ---PHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 369 -~~~l~~~l~~~---~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
...+.. ... ...+|+|+... + . ...+....++|+|+|.++.
T Consensus 225 ~~~~i~~--~~~~~~g~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 225 EESSIIE--RIRSAIGDLPNVTIDCS-G----N----EKCITIGINITRTGGTLML 269 (352)
T ss_dssp CHHHHHH--HHHHHSSSCCSEEEECS-C----C----HHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHH--HhccccCCCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 111110 011 24699999542 1 1 2345666789999999883
No 347
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.75 E-value=0.047 Score=41.03 Aligned_cols=53 Identities=23% Similarity=0.412 Sum_probs=43.6
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHH
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
..+..|-.|++.|.+...+..||+..++- ....|..|+..|.....|..||.-
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~---------------------------~~~~C~~C~k~f~~~~~L~~H~~~ 67 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTVHTGE---------------------------KPYRCNICGAQFNRPANLKTHTRI 67 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHHHCCC---------------------------CSEECTTTCCEESCHHHHHHHHHH
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHcCCC---------------------------CCEECCCCCchhCCHHHHHHHHHh
Confidence 45789999999999999999999854320 113599999999999999999974
No 348
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.73 E-value=0.023 Score=44.86 Aligned_cols=79 Identities=19% Similarity=0.219 Sum_probs=50.6
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcc----cccccccCCccCCHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVA----ENRCWICGLTCQSNQDLQNH 120 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~----~~~c~~C~~~~~~~~~~~~H 120 (497)
.+..|-.|+..|.+...+..||+..++- -......=+.-|-..-.|..-+|.... ...|..|+..|.+...|..|
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H 84 (95)
T 2yt9_A 6 SGVACEICGKIFRDVYHLNRHKLSHSGE-KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH 84 (95)
T ss_dssp SCEECSSSCCEESSSHHHHHHHHHSCSS-CSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred CCeECCCCCCccCChHHHHHHHHhcCCC-CCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence 4789999999999999999999865442 111111112223333334455554432 23499999999999999999
Q ss_pred HHHh
Q 010913 121 LHEA 124 (497)
Q Consensus 121 m~~~ 124 (497)
|...
T Consensus 85 ~~~~ 88 (95)
T 2yt9_A 85 IKQV 88 (95)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8753
No 349
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.73 E-value=0.061 Score=52.88 Aligned_cols=90 Identities=20% Similarity=0.114 Sum_probs=60.7
Q ss_pred hCCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 291 ENPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
....+.+|.+||-+|+|. |.++..+|++ |+ +|++++ ++.-.+.+++. |. -.++. |
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----Ga----------------~~v~~-d 192 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----GV----------------RHLYR-E 192 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----TE----------------EEEES-S
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----CC----------------CEEEc-C
Confidence 566778999999999964 7788888887 98 999999 88777766653 32 12232 3
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.. .+ ...+|+|+-.. +. . .+....++|+|+|+++.
T Consensus 193 ---~~---~v-~~g~Dvv~d~~-g~--------~-~~~~~~~~l~~~G~~v~ 227 (315)
T 3goh_A 193 ---PS---QV-TQKYFAIFDAV-NS--------Q-NAAALVPSLKANGHIIC 227 (315)
T ss_dssp ---GG---GC-CSCEEEEECC-----------------TTGGGEEEEEEEEE
T ss_pred ---HH---Hh-CCCccEEEECC-Cc--------h-hHHHHHHHhcCCCEEEE
Confidence 11 13 56899999432 11 1 12456789999999873
No 350
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=94.70 E-value=0.035 Score=39.75 Aligned_cols=51 Identities=20% Similarity=0.404 Sum_probs=41.5
Q ss_pred CcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHH
Q 010913 46 GFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 46 ~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
+..|-.|++.|.+...+..||+..++- ....|..|+..|.+...|..||..
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~H~~~ 52 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRSHTNE---------------------------KPYPCGLCNRAFTRRDLLIRHAQK 52 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHTTTSS---------------------------CSEECTTTCCEESSHHHHHHHHTT
T ss_pred cCcCCCCccccCCHHHHHHHHHHhCCC---------------------------CCccCCCCCCccCCHHHHHHHHHH
Confidence 568999999999999999999864321 113599999999999999999853
No 351
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=94.69 E-value=0.015 Score=44.46 Aligned_cols=76 Identities=16% Similarity=0.245 Sum_probs=39.2
Q ss_pred cceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcc--cccccccCCccCCHHHHHHHHHH
Q 010913 47 FLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVA--ENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 47 ~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~--~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
..|-.|+..|.+...+..||+..++-.. .....=+.-|...-.|..-++.... ...|..|+..|.+...|..||..
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHSDTRP-YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHHTCCC-EECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred ccCCCCcccccCchhHHHHHHHcCCCCC-eeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence 4577777777777777777765433100 0000001111122223233332221 13488888888888888888764
No 352
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.69 E-value=0.039 Score=55.01 Aligned_cols=98 Identities=21% Similarity=0.221 Sum_probs=63.0
Q ss_pred CCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch-h
Q 010913 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV-E 370 (497)
Q Consensus 294 ~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~-~ 370 (497)
.+.+|.+||-+|+|. |.++..+|++ |..+|+++|.++.-++.+++ .|. +.+.-...+. .
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa--------------~~~i~~~~~~~~ 229 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGA--------------DAAVKSGAGAAD 229 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTC--------------SEEEECSTTHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC--------------CEEEcCCCcHHH
Confidence 467899999999976 7788888886 66699999999987776654 343 1111111111 1
Q ss_pred hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 371 ~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+.. + .....+|+|+-.. + . ...+....++|+|||.++.
T Consensus 230 ~v~~-~-t~g~g~d~v~d~~-G----~----~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 230 AIRE-L-TGGQGATAVFDFV-G----A----QSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp HHHH-H-HGGGCEEEEEESS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred HHHH-H-hCCCCCeEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 1110 0 1234799999532 1 1 2356677889999999883
No 353
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.65 E-value=0.031 Score=41.54 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=44.2
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHH
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
..+..|-.|++.|.+...+..||+..++- ....|..|+..|.....|..||..
T Consensus 7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~---------------------------~~~~C~~C~~~f~~~~~L~~H~~~ 59 (70)
T 1x5w_A 7 GHPEKCSECSYSCSSKAALRIHERIHCTD---------------------------RPFKCNYCSFDTKQPSNLSKHMKK 59 (70)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHGGGCCS---------------------------CSEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHcCCC---------------------------CCEeCCCCCCccCCHHHHHHHHHH
Confidence 35789999999999999999999863320 112599999999999999999986
Q ss_pred h
Q 010913 124 A 124 (497)
Q Consensus 124 ~ 124 (497)
.
T Consensus 60 h 60 (70)
T 1x5w_A 60 F 60 (70)
T ss_dssp H
T ss_pred H
Confidence 5
No 354
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.46 E-value=0.051 Score=43.80 Aligned_cols=80 Identities=18% Similarity=0.190 Sum_probs=51.2
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcc--cccccccCCccCCHHHHHHHH
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVA--ENRCWICGLTCQSNQDLQNHL 121 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~--~~~c~~C~~~~~~~~~~~~Hm 121 (497)
..+..|-.|...|.+...+..||+..++-.. .....=+.-|...-.|..-++.... ...|..|+..|.+...|..||
T Consensus 15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~ 93 (106)
T 2ee8_A 15 KKEFICKFCGRHFTKSYNLLIHERTHTDERP-YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK 93 (106)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC-CBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred CcCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence 3578999999999999999999987664211 1111112223333333333333322 234999999999999999998
Q ss_pred HHh
Q 010913 122 HEA 124 (497)
Q Consensus 122 ~~~ 124 (497)
.-.
T Consensus 94 ~~H 96 (106)
T 2ee8_A 94 TLH 96 (106)
T ss_dssp HHT
T ss_pred HHh
Confidence 743
No 355
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.44 E-value=0.0067 Score=75.84 Aligned_cols=113 Identities=17% Similarity=0.051 Sum_probs=52.7
Q ss_pred HHHHHHhCCCCCCCCEEEEEcCCCCHhHHHHHHc-C-----CCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 010913 285 YRQAILENPSLMKGAVVMDIGCGTGILSLFAAQA-G-----ASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINN 358 (497)
Q Consensus 285 y~~~i~~~~~~~~~~~VLDvGCGtG~ls~~la~~-G-----~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~ 358 (497)
+.+.+..... .+..+||+||.|||..+..+.+. + ....+.+|+|+...+.|+++++..
T Consensus 1229 ~~~~~~~~~~-~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--------------- 1292 (2512)
T 2vz8_A 1229 CVDTALENMA-SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--------------- 1292 (2512)
T ss_dssp HHHHHHTTSS-SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------------
T ss_pred HHHHHHhcCC-CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------------
Confidence 4444443321 35679999999999875554433 2 247889999988777777665432
Q ss_pred CCceEEEecchhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEecc
Q 010913 359 AGKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 359 ~~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~ 421 (497)
.+..-.-+..+. .++..++||+||+.. +++...++...|..++++|||||.+++.
T Consensus 1293 --di~~~~~d~~~~---~~~~~~~ydlvia~~---vl~~t~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1293 --HVTQGQWDPANP---APGSLGKADLLVCNC---ALATLGDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp --TEEEECCCSSCC---CC-----CCEEEEEC---C--------------------CCEEEEE
T ss_pred --cccccccccccc---ccCCCCceeEEEEcc---cccccccHHHHHHHHHHhcCCCcEEEEE
Confidence 122111121111 023456799999543 5555567788999999999999998864
No 356
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.30 E-value=0.1 Score=51.45 Aligned_cols=101 Identities=19% Similarity=0.248 Sum_probs=63.1
Q ss_pred HHhCCCCCCCCEEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 289 ILENPSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
+.....+.+|.+||-+|+ | .|.++..++++ |+ +|++++.++.-++.+++. |. . .++
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----Ga---------------~-~~~ 190 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL----GA---------------W-ETI 190 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TC---------------S-EEE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC---------------C-EEE
Confidence 344556789999999994 3 46777777776 98 999999999877777643 32 1 112
Q ss_pred ecchhhccccc--CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 366 QGMVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 366 ~gd~~~l~~~l--~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
...-.++...+ ......+|+|+... +. ..+....++|+|||+++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~g~Dvvid~~-g~---------~~~~~~~~~l~~~G~iv~ 237 (325)
T 3jyn_A 191 DYSHEDVAKRVLELTDGKKCPVVYDGV-GQ---------DTWLTSLDSVAPRGLVVS 237 (325)
T ss_dssp ETTTSCHHHHHHHHTTTCCEEEEEESS-CG---------GGHHHHHTTEEEEEEEEE
T ss_pred eCCCccHHHHHHHHhCCCCceEEEECC-Ch---------HHHHHHHHHhcCCCEEEE
Confidence 11111110000 02345799999643 11 245566789999999883
No 357
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.29 E-value=0.11 Score=51.27 Aligned_cols=98 Identities=22% Similarity=0.216 Sum_probs=60.0
Q ss_pred HhCCCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 290 LENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 290 ~~~~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
.....+.+|++||-.||+ .|.....+++. |+ +|++++.++..++.+++ .|. ...+-.
T Consensus 138 ~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~---------------~~~~d~ 197 (333)
T 1v3u_A 138 LEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ----IGF---------------DAAFNY 197 (333)
T ss_dssp HTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTC---------------SEEEET
T ss_pred HHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCC---------------cEEEec
Confidence 345567889999999984 45555555554 88 99999999877766532 232 111111
Q ss_pred c---chhh-cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 367 G---MVEE-LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 367 g---d~~~-l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
. ++.. +.. ...+.+|+++.+. + . ..+....++|+|||.++.
T Consensus 198 ~~~~~~~~~~~~---~~~~~~d~vi~~~-g-----~----~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 198 KTVNSLEEALKK---ASPDGYDCYFDNV-G-----G----EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp TSCSCHHHHHHH---HCTTCEEEEEESS-C-----H----HHHHHHHTTEEEEEEEEE
T ss_pred CCHHHHHHHHHH---HhCCCCeEEEECC-C-----h----HHHHHHHHHHhcCCEEEE
Confidence 1 1111 110 1125799999653 2 1 236677799999999873
No 358
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.16 E-value=0.041 Score=55.05 Aligned_cols=72 Identities=15% Similarity=0.191 Sum_probs=52.6
Q ss_pred CEEEEEcCCCCHhHHHHHHcCC--CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 299 AVVMDIGCGTGILSLFAAQAGA--SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 299 ~~VLDvGCGtG~ls~~la~~G~--~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
.+|+|+.||.|.+++.+.++|. ..|.++|+++.+++.-+.+. +...++.+|+.++...
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~-------------------~~~~~~~~DI~~~~~~- 63 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF-------------------PETNLLNRNIQQLTPQ- 63 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-------------------TTSCEECCCGGGCCHH-
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC-------------------CCCceeccccccCCHH-
Confidence 4799999999999999999986 67899999998776555553 2334677888876421
Q ss_pred CCCCCceeEEEecc
Q 010913 377 QIQPHSVDVLVSEW 390 (497)
Q Consensus 377 ~~~~~~fDvIvs~~ 390 (497)
.++...+|+++..+
T Consensus 64 ~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 64 VIKKWNVDTILMSP 77 (333)
T ss_dssp HHHHTTCCEEEECC
T ss_pred HhccCCCCEEEecC
Confidence 12223689999654
No 359
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.15 E-value=0.037 Score=42.08 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=44.5
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
.+..|-.|++.|.+...+..||+..++- .......|..|+..|.....|..||...
T Consensus 6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~------------------------~~~~~~~C~~C~k~f~~~~~L~~H~~~~ 61 (78)
T 2d9h_A 6 SGLQCEICGFTCRQKASLNWHQRKHAET------------------------VAALRFPCEFCGKRFEKPDSVAAHRSKS 61 (78)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHHHH------------------------TTTCCEECTTTCCEESSHHHHHHHHHHT
T ss_pred cCeECCCCCCeeCCHHHHHHHHHHhhcc------------------------CCCcccCCCCCCchhCCHHHHHHHHHHh
Confidence 5789999999999999999999865431 0011135999999999999999999654
No 360
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.00 E-value=0.1 Score=51.90 Aligned_cols=95 Identities=22% Similarity=0.213 Sum_probs=60.4
Q ss_pred CCCCCCCEEEEEcC--CCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec--
Q 010913 293 PSLMKGAVVMDIGC--GTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-- 367 (497)
Q Consensus 293 ~~~~~~~~VLDvGC--GtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g-- 367 (497)
..+.++.+||-+|+ |.|.....+++. |+ +|++++.++..++.+++. |. +. ++..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----ga--------------~~--~~d~~~ 220 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL----GA--------------DE--TVNYTH 220 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TC--------------SE--EEETTS
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc----CC--------------CE--EEcCCc
Confidence 46678999999998 457777777776 88 999999999877776542 32 11 1211
Q ss_pred -ch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 368 -MV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 368 -d~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++ ..+.. . .....+|+|+... + . ..+....+.|+++|.++.
T Consensus 221 ~~~~~~~~~-~-~~~~~~d~vi~~~-g-----~----~~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 221 PDWPKEVRR-L-TGGKGADKVVDHT-G-----A----LYFEGVIKATANGGRIAI 263 (343)
T ss_dssp TTHHHHHHH-H-TTTTCEEEEEESS-C-----S----SSHHHHHHHEEEEEEEEE
T ss_pred ccHHHHHHH-H-hCCCCceEEEECC-C-----H----HHHHHHHHhhccCCEEEE
Confidence 11 11110 0 1234799999653 2 1 134556678999999873
No 361
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.99 E-value=0.11 Score=51.63 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=62.2
Q ss_pred CCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 292 NPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 292 ~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
.....+|.+||-.|+|. |.++..+|++ |+..++++|.++.-++.|++ .|.. ..+.....+.
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~-------------~~i~~~~~~~ 217 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAM-------------QTFNSSEMSA 217 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS-------------EEEETTTSCH
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCe-------------EEEeCCCCCH
Confidence 34567899999999976 5567777776 88889999999987766654 3431 0111111122
Q ss_pred hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 370 ~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+....+ .....+|+|+-.. + . ...+....++|+|||.++.
T Consensus 218 ~~~~~~~-~~~~g~d~v~d~~-G----~----~~~~~~~~~~l~~~G~~v~ 258 (346)
T 4a2c_A 218 PQMQSVL-RELRFNQLILETA-G----V----PQTVELAVEIAGPHAQLAL 258 (346)
T ss_dssp HHHHHHH-GGGCSSEEEEECS-C----S----HHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHhh-cccCCcccccccc-c----c----cchhhhhhheecCCeEEEE
Confidence 1111000 1235688888432 1 1 3356666789999999883
No 362
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.87 E-value=0.064 Score=53.37 Aligned_cols=93 Identities=22% Similarity=0.187 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec---c
Q 010913 294 SLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG---M 368 (497)
Q Consensus 294 ~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g---d 368 (497)
.+.+|.+||-+|+|. |.++..+++. |+ +|++++.++.-++.+++ .|. + .++.. +
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa--------------~--~~~d~~~~~ 219 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGA--------------D--LVVNPLKED 219 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTC--------------S--EEECTTTSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCC--------------C--EEecCCCcc
Confidence 467899999999964 6677777776 88 99999999987776653 342 1 11111 1
Q ss_pred h-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 369 V-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 369 ~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+ ..+.. .. +.+|+|+... + . ...+....++|+++|.++.
T Consensus 220 ~~~~~~~---~~-~~~d~vid~~-g----~----~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 220 AAKFMKE---KV-GGVHAAVVTA-V----S----KPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp HHHHHHH---HH-SSEEEEEESS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHH---Hh-CCCCEEEECC-C----C----HHHHHHHHHHhhcCCEEEE
Confidence 1 11110 11 4699999542 1 1 2355667789999999873
No 363
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.86 E-value=0.058 Score=40.86 Aligned_cols=52 Identities=21% Similarity=0.351 Sum_probs=42.7
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHH
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLH 122 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~ 122 (497)
..+..|-.|++.|.+...+..||+..++- ....|..|+..|.....|..||.
T Consensus 16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~L~~H~~ 67 (77)
T 2cot_A 16 RRRYKCDECGKSFSHSSDLSKHRRTHTGE---------------------------KPYKCDECGKAFIQRSHLIGHHR 67 (77)
T ss_dssp SCSSBCSSSCCBCSCHHHHHHHHTTTCCS---------------------------CSEECSSSCCEESSHHHHHHHGG
T ss_pred CCCEECCCCCcccCCHHHHHHHHHHcCCC---------------------------cCeeCCCCCCccCCHHHHHHHHH
Confidence 35789999999999999999999854320 11359999999999999999985
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.85 E-value=0.067 Score=53.33 Aligned_cols=100 Identities=21% Similarity=0.246 Sum_probs=63.5
Q ss_pred HHhCCCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 289 ILENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
+.....+.+|.+||-+|++ .|.++..++++ |+ +|++++.++.-.+.+++. |. +. ++
T Consensus 151 l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga--------------~~--v~ 209 (342)
T 4eye_A 151 YARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSV----GA--------------DI--VL 209 (342)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TC--------------SE--EE
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CC--------------cE--Ee
Confidence 3356677899999999983 46777777776 88 999999998777766653 32 11 22
Q ss_pred ecchhhccccc--CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 366 QGMVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 366 ~gd~~~l~~~l--~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
... .++...+ ......+|+|+... +. ..+....++|+|||.++.
T Consensus 210 ~~~-~~~~~~v~~~~~~~g~Dvvid~~-g~---------~~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 210 PLE-EGWAKAVREATGGAGVDMVVDPI-GG---------PAFDDAVRTLASEGRLLV 255 (342)
T ss_dssp ESS-TTHHHHHHHHTTTSCEEEEEESC-C-----------CHHHHHHTEEEEEEEEE
T ss_pred cCc-hhHHHHHHHHhCCCCceEEEECC-ch---------hHHHHHHHhhcCCCEEEE
Confidence 211 1111000 02234799999643 21 135566789999999883
No 365
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.85 E-value=0.071 Score=52.03 Aligned_cols=89 Identities=18% Similarity=0.159 Sum_probs=58.3
Q ss_pred CCCCCEEEEEcC--CCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch-h
Q 010913 295 LMKGAVVMDIGC--GTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV-E 370 (497)
Q Consensus 295 ~~~~~~VLDvGC--GtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~-~ 370 (497)
+.+|.+||-+|+ |.|.++..+++. |+ +|++++.++.-.+.+++ .|. + .++...- .
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga--------------~--~~~~~~~~~ 181 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLA----LGA--------------E--EAATYAEVP 181 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH----TTC--------------S--EEEEGGGHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCC--------------C--EEEECCcch
Confidence 678999999998 346677777776 88 99999998876665543 342 1 1222111 2
Q ss_pred hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 371 ~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
++... + ..+|+|+. . +. ..+....+.|+|+|+++
T Consensus 182 ~~~~~--~--~~~d~vid-~-g~---------~~~~~~~~~l~~~G~~v 215 (302)
T 1iz0_A 182 ERAKA--W--GGLDLVLE-V-RG---------KEVEESLGLLAHGGRLV 215 (302)
T ss_dssp HHHHH--T--TSEEEEEE-C-SC---------TTHHHHHTTEEEEEEEE
T ss_pred hHHHH--h--cCceEEEE-C-CH---------HHHHHHHHhhccCCEEE
Confidence 22111 2 57999995 3 21 13566678999999987
No 366
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=93.83 E-value=0.29 Score=48.07 Aligned_cols=111 Identities=11% Similarity=0.119 Sum_probs=62.5
Q ss_pred CCEEEEEcCCCCHhHHHHH----HcC-CC--EEEEEeCCH---------HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCc
Q 010913 298 GAVVMDIGCGTGILSLFAA----QAG-AS--RVIAVEASE---------KMAAVATQIAKDNDFWWDRPQSEGNINNAGK 361 (497)
Q Consensus 298 ~~~VLDvGCGtG~ls~~la----~~G-~~--~V~gvD~S~---------~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~ 361 (497)
.-+|||+|=|||...+... +.+ .. +.+++|..+ ...+..........-. ....-.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~---------~~~~v~ 167 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY---------EGERLS 167 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE---------ECSSEE
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc---------cCCcEE
Confidence 4589999999998644322 222 22 457777521 1111222222211000 000114
Q ss_pred eEEEecchhhcccccCCCCCceeEEEeccccccccChhhH-HHHHHHHhccccCCcEEec
Q 010913 362 MEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLLYESML-SSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 362 i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l-~~vL~~~~r~LkpgG~li~ 420 (497)
++++.||+.+.-. .++..+||+|+-..++..- .+.+. ..++..+.++++|||+++-
T Consensus 168 L~l~~GDa~~~l~--~l~~~~~Da~flDgFsP~k-NPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 168 LKVLLGDARKRIK--EVENFKADAVFHDAFSPYK-NPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp EEEEESCHHHHGG--GCCSCCEEEEEECCSCTTT-SGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEechHHHHHh--hhcccceeEEEeCCCCccc-CcccCCHHHHHHHHHHhCCCcEEEE
Confidence 5788899977532 1344589999976533221 12232 5799999999999999983
No 367
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.81 E-value=0.12 Score=51.30 Aligned_cols=100 Identities=18% Similarity=0.192 Sum_probs=61.4
Q ss_pred HhCCCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe
Q 010913 290 LENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ 366 (497)
Q Consensus 290 ~~~~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~ 366 (497)
.....+.+|.+||-+|++ .|.++..++++ |+ +|++++.++.-++.+++ .|. + .++.
T Consensus 141 ~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga--------------~--~~~~ 199 (334)
T 3qwb_A 141 NEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE----YGA--------------E--YLIN 199 (334)
T ss_dssp HTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTC--------------S--EEEE
T ss_pred HHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCC--------------c--EEEe
Confidence 344567899999999953 36667777776 88 99999999887766554 332 1 1222
Q ss_pred cchhhccccc--CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 367 GMVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 367 gd~~~l~~~l--~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
..-.++...+ ......+|+|+... +. ..+....++|+|||.++.
T Consensus 200 ~~~~~~~~~~~~~~~~~g~D~vid~~-g~---------~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 200 ASKEDILRQVLKFTNGKGVDASFDSV-GK---------DTFEISLAALKRKGVFVS 245 (334)
T ss_dssp TTTSCHHHHHHHHTTTSCEEEEEECC-GG---------GGHHHHHHHEEEEEEEEE
T ss_pred CCCchHHHHHHHHhCCCCceEEEECC-Ch---------HHHHHHHHHhccCCEEEE
Confidence 1111110000 01245799999643 21 245556689999999883
No 368
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.81 E-value=0.1 Score=51.97 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=59.5
Q ss_pred CCCCCCEEEEEcCCC-CHhHHHHHHc---CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 294 SLMKGAVVMDIGCGT-GILSLFAAQA---GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 294 ~~~~~~~VLDvGCGt-G~ls~~la~~---G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
.+ +|.+||-+|+|. |.++..+|++ |+ +|++++.++.-++.+++. |. + .++...-
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~--~vi~~~~ 225 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL----GA--------------D--YVSEMKD 225 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH----TC--------------S--EEECHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh----CC--------------C--EEecccc
Confidence 45 899999999974 6667777764 77 899999999877777653 32 1 1221111
Q ss_pred -hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 370 -EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 370 -~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+....+ .....+|+|+-.. + . ...+....++|+|||.++.
T Consensus 226 ~~~~~~~~-~~g~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 226 AESLINKL-TDGLGASIAIDLV-G----T----EETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp HHHHHHHH-HTTCCEEEEEESS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred chHHHHHh-hcCCCccEEEECC-C----C----hHHHHHHHHHhhcCCEEEE
Confidence 1110001 1234799999542 1 1 2356667789999999873
No 369
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.76 E-value=0.069 Score=53.21 Aligned_cols=72 Identities=14% Similarity=0.113 Sum_probs=52.6
Q ss_pred CCEEEEEcCCCCHhHHHHHHcCC--CEE-EEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 298 GAVVMDIGCGTGILSLFAAQAGA--SRV-IAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 298 ~~~VLDvGCGtG~ls~~la~~G~--~~V-~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
..+|+|+.||.|.+++.+.++|. ..| .|+|+++.+++..+.+.. .. ++.+|+.++..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~------------------~~--~~~~DI~~~~~ 69 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK------------------EE--VQVKNLDSISI 69 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC------------------CC--CBCCCTTTCCH
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC------------------CC--cccCChhhcCH
Confidence 46899999999999999999984 567 799999988877666641 11 45677776641
Q ss_pred ccCCCCCceeEEEecc
Q 010913 375 SMQIQPHSVDVLVSEW 390 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~ 390 (497)
. .++...+|+++..+
T Consensus 70 ~-~i~~~~~Dil~ggp 84 (327)
T 3qv2_A 70 K-QIESLNCNTWFMSP 84 (327)
T ss_dssp H-HHHHTCCCEEEECC
T ss_pred H-HhccCCCCEEEecC
Confidence 1 12223689999754
No 370
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=93.74 E-value=0.04 Score=42.79 Aligned_cols=77 Identities=23% Similarity=0.342 Sum_probs=44.4
Q ss_pred Ccceec--CCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHHHHH
Q 010913 46 GFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHL 121 (497)
Q Consensus 46 ~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~~Hm 121 (497)
+..|-+ |+..|.+...+..||+..++=. ......=+.-|...-.|..-++..... ..|..|+..|.+...|..||
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~ 82 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQK-PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT 82 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHHCCC-CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred ceECCCCCCCCccCCHHHHHHHHHHhCCCC-CccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHH
Confidence 567774 8888888888888877544311 000001111122222233333332222 34999999999999999998
Q ss_pred HH
Q 010913 122 HE 123 (497)
Q Consensus 122 ~~ 123 (497)
.-
T Consensus 83 ~~ 84 (90)
T 1a1h_A 83 KI 84 (90)
T ss_dssp GG
T ss_pred HH
Confidence 63
No 371
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.72 E-value=0.17 Score=52.57 Aligned_cols=45 Identities=29% Similarity=0.339 Sum_probs=36.4
Q ss_pred CCCCCCCEEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHH
Q 010913 293 PSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (497)
Q Consensus 293 ~~~~~~~~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~ 338 (497)
..+.+|.+||-+|+ | .|.++..+|++ |+ +|++++.++.-++.+++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRA 271 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHh
Confidence 56788999999998 4 37778888887 88 89999999887777754
No 372
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.61 E-value=0.14 Score=50.96 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=59.4
Q ss_pred CCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEe-c-
Q 010913 293 PSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQ-G- 367 (497)
Q Consensus 293 ~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~-g- 367 (497)
..+.+|++||-+|++ .|.....+++. |+ +|++++.++...+.+++ .|. + .++. .
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~----~g~--------------~--~~~d~~~ 223 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS----IGG--------------E--VFIDFTK 223 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH----TTC--------------C--EEEETTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH----cCC--------------c--eEEecCc
Confidence 356789999999984 46666666665 88 99999998876665543 332 1 1111 1
Q ss_pred --chhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 368 --MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 368 --d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++.+.-. ....+.+|+|+... + ....+....+.|+++|.++.
T Consensus 224 ~~~~~~~~~--~~~~~~~D~vi~~~-g--------~~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 224 EKDIVGAVL--KATDGGAHGVINVS-V--------SEAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp CSCHHHHHH--HHHTSCEEEEEECS-S--------CHHHHHHHTTSEEEEEEEEE
T ss_pred cHhHHHHHH--HHhCCCCCEEEECC-C--------cHHHHHHHHHHHhcCCEEEE
Confidence 1111100 00112699999653 1 12466778899999999873
No 373
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.56 E-value=0.11 Score=51.69 Aligned_cols=96 Identities=21% Similarity=0.286 Sum_probs=59.5
Q ss_pred CCCCCCCEEEEEcCCCC--HhHHHHHH-c-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 293 PSLMKGAVVMDIGCGTG--ILSLFAAQ-A-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 293 ~~~~~~~~VLDvGCGtG--~ls~~la~-~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
..+.++.+||-+|+|.| ..+..+++ . |+ +|+++|.++..++.+++. |. ...+-..+
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~----g~---------------~~~~~~~~ 225 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA----GA---------------DYVINASM 225 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH----TC---------------SEEEETTT
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh----CC---------------CEEecCCC
Confidence 45678999999999854 44445554 4 77 899999999877766543 32 11111111
Q ss_pred --h-hhcccccCCCC-CceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 369 --V-EELGESMQIQP-HSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 369 --~-~~l~~~l~~~~-~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
. ..+. .... +.+|+|+... +. ...+....++|+|+|.++.
T Consensus 226 ~~~~~~~~---~~~~~~~~d~vi~~~-g~--------~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 226 QDPLAEIR---RITESKGVDAVIDLN-NS--------EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp SCHHHHHH---HHTTTSCEEEEEESC-CC--------HHHHTTGGGGEEEEEEEEE
T ss_pred ccHHHHHH---HHhcCCCceEEEECC-CC--------HHHHHHHHHHHhcCCEEEE
Confidence 1 0011 0112 4799999643 11 2356677899999999873
No 374
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.49 E-value=0.072 Score=43.63 Aligned_cols=81 Identities=23% Similarity=0.294 Sum_probs=50.1
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcC---cchhhhhhhhcCCc--cCceehhhhhHhhc--ccccccccCCccCCHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHC---FDFHSVKTELRLDF--YGSFKLINYIRSQV--AENRCWICGLTCQSNQDL 117 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~---Fd~~~~~~~~~ld~--Y~~iKliNyiR~~~--~~~~c~~C~~~~~~~~~~ 117 (497)
.+..|-.|++.|.+...+..||+. |+ -........=+--| ...-.|..-+|... ....|..|+..|.....|
T Consensus 18 ~~~~C~~C~k~f~~~~~L~~H~~~-~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L 96 (115)
T 2dmi_A 18 SKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDL 96 (115)
T ss_dssp CSEEBSSSSCEESSHHHHHHHHHH-TCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHH
T ss_pred CCEECCccCchhcCHHHHHHHHHH-hCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHH
Confidence 578999999999999999999997 32 11100000001111 12222222222222 223599999999999999
Q ss_pred HHHHHHhcc
Q 010913 118 QNHLHEAYN 126 (497)
Q Consensus 118 ~~Hm~~~~~ 126 (497)
..||....+
T Consensus 97 ~~H~~~hh~ 105 (115)
T 2dmi_A 97 SVHMIKTKH 105 (115)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHhCC
Confidence 999987533
No 375
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.48 E-value=0.053 Score=44.07 Aligned_cols=78 Identities=12% Similarity=0.180 Sum_probs=49.6
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHLH 122 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~~Hm~ 122 (497)
.+..| .|++.|.+...+..||+..++--. .....=+--|...-.|..-++..... ..|..|+..|.....|..||.
T Consensus 9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 86 (110)
T 2csh_A 9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVT 86 (110)
T ss_dssp CCEEC-TTSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred CCEec-cCCCccCCHHHHHHHHHHcCCCcC-ccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHH
Confidence 47899 899999999999999997654211 11111111222233344444433222 249999999999999999997
Q ss_pred Hh
Q 010913 123 EA 124 (497)
Q Consensus 123 ~~ 124 (497)
..
T Consensus 87 ~~ 88 (110)
T 2csh_A 87 SC 88 (110)
T ss_dssp HH
T ss_pred Hc
Confidence 43
No 376
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.44 E-value=0.076 Score=52.73 Aligned_cols=48 Identities=23% Similarity=0.362 Sum_probs=41.3
Q ss_pred CCCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCH---HHHHHHHHHHHhCC
Q 010913 296 MKGAVVMDIGCGTGILSLFAAQAGASRVIAVEASE---KMAAVATQIAKDND 344 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~---~~i~~A~~~~~~~g 344 (497)
.+|..|||.-||+|..+..+.+.|. +.+|+|+++ ..++.|+++++..+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 6789999999999999999999987 999999999 99999999876554
No 377
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.42 E-value=0.074 Score=42.60 Aligned_cols=54 Identities=17% Similarity=0.288 Sum_probs=43.9
Q ss_pred CCcceecCCCCCC-CHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYS-SCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 45 ~~~~CLFC~~~~~-s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
.+..|-.|.+.|. +...+..||+..|+- . ....|..|++.|.....|..||..
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~~-----~---------------------~~~~C~~C~k~F~~~~~L~~H~~~ 76 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKL-----Q---------------------DALKCQHCRKQFKSKAGLNYHTMA 76 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHHHHHH-----H---------------------HHHSCSSSCCCCSCHHHHHHHHHH
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHHHcCC-----C---------------------CCEECCCCCCccCCHHHHHHHHHH
Confidence 4789999999999 999999999865431 0 012499999999999999999975
Q ss_pred h
Q 010913 124 A 124 (497)
Q Consensus 124 ~ 124 (497)
.
T Consensus 77 h 77 (98)
T 2gqj_A 77 E 77 (98)
T ss_dssp H
T ss_pred H
Confidence 4
No 378
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.40 E-value=0.093 Score=43.23 Aligned_cols=78 Identities=18% Similarity=0.177 Sum_probs=48.2
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhh-----cccccccccCCccCCHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQ-----VAENRCWICGLTCQSNQDLQN 119 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~-----~~~~~c~~C~~~~~~~~~~~~ 119 (497)
.+..|-.|+..|.+...+..||+..++-..- ....=+.-|...-.|..-++.. .....|..|+..|.+...|..
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~ 84 (124)
T 2dlq_A 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPF-ECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL 84 (124)
T ss_dssp SSCCCTTTCCCCSSHHHHHHHHHHHSSCCSC-BCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHH
T ss_pred CCCCCCCCCCcCCCHHHHHHHHHhCCCCCCe-ECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHH
Confidence 4688999999999999999999876653111 1111112223333344444321 112348889999988888888
Q ss_pred HHHH
Q 010913 120 HLHE 123 (497)
Q Consensus 120 Hm~~ 123 (497)
||..
T Consensus 85 H~~~ 88 (124)
T 2dlq_A 85 HMVS 88 (124)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8864
No 379
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=93.36 E-value=0.06 Score=42.52 Aligned_cols=52 Identities=27% Similarity=0.450 Sum_probs=43.2
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
.+-+|-.|++.|.+...+..||+..|+- | ...|..|+++|.....|..||+.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~-----------------k----------~~~C~~C~k~F~~~~~L~~H~~~ 78 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLHAA-----------------Q----------VFPCKYCPATFYSSPGLTRHINK 78 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTSCS-----------------S----------SEECTTSSCEESSHHHHHHHHHT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhccCC-----------------C----------ccCCCCCCCEeCCHHHHHHhCcc
Confidence 4578999999999999999999865541 0 12499999999999999999974
No 380
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.36 E-value=0.16 Score=50.01 Aligned_cols=97 Identities=16% Similarity=0.138 Sum_probs=59.4
Q ss_pred hCCCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 291 ENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
....+.+|.+||-.|++ .|.....+++. |+ +|++++.++..++.+++. |. ...+-..
T Consensus 134 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~----g~---------------~~~~~~~ 193 (327)
T 1qor_A 134 KTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA----GA---------------WQVINYR 193 (327)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TC---------------SEEEETT
T ss_pred HhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CC---------------CEEEECC
Confidence 35567889999999953 45555556655 88 999999998777766542 22 1111111
Q ss_pred --ch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 368 --MV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 368 --d~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
+. ..+.. ......+|+|+... + ...+....++|++||.++
T Consensus 194 ~~~~~~~~~~--~~~~~~~D~vi~~~-g---------~~~~~~~~~~l~~~G~iv 236 (327)
T 1qor_A 194 EEDLVERLKE--ITGGKKVRVVYDSV-G---------RDTWERSLDCLQRRGLMV 236 (327)
T ss_dssp TSCHHHHHHH--HTTTCCEEEEEECS-C---------GGGHHHHHHTEEEEEEEE
T ss_pred CccHHHHHHH--HhCCCCceEEEECC-c---------hHHHHHHHHHhcCCCEEE
Confidence 11 11110 01234699999653 2 124566678999999987
No 381
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.35 E-value=0.17 Score=50.86 Aligned_cols=96 Identities=21% Similarity=0.263 Sum_probs=60.4
Q ss_pred CCCCCCCEEEEEcC--CCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 293 PSLMKGAVVMDIGC--GTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 293 ~~~~~~~~VLDvGC--GtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
..+.+|.+||-+|+ |.|.++..+++. |+ +|++++.++.-++.+++ .|. + .++..+-
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga--------------~--~~~~~~~ 217 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGC--------------D--RPINYKT 217 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTC--------------S--EEEETTT
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCC--------------c--EEEecCC
Confidence 45678999999993 457777778776 88 89999999877766654 342 1 1121111
Q ss_pred hhccccc-CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 370 EELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 370 ~~l~~~l-~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.++...+ ......+|+|+... + . ..+....++|+++|.++
T Consensus 218 ~~~~~~~~~~~~~g~D~vid~~-g----~-----~~~~~~~~~l~~~G~iv 258 (362)
T 2c0c_A 218 EPVGTVLKQEYPEGVDVVYESV-G----G-----AMFDLAVDALATKGRLI 258 (362)
T ss_dssp SCHHHHHHHHCTTCEEEEEECS-C----T-----HHHHHHHHHEEEEEEEE
T ss_pred hhHHHHHHHhcCCCCCEEEECC-C----H-----HHHHHHHHHHhcCCEEE
Confidence 1110000 01235799999642 1 1 35666778999999987
No 382
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.32 E-value=0.066 Score=41.13 Aligned_cols=57 Identities=23% Similarity=0.384 Sum_probs=45.7
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
.+..|-.|++.|.+...+..||+..|+-... .....|..|+..|.....|..||...
T Consensus 14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~-----------------------~~~~~C~~C~~~f~~~~~L~~H~~~h 70 (86)
T 1x6h_A 14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFV-----------------------PAAFVCSKCGKTFTRRNTMARHADNC 70 (86)
T ss_dssp CCEECSSSSCEESSHHHHHHHHHHTTCSSCC-----------------------CCCEECSSSCCEESCHHHHHHHHHHC
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHhcCCcCC-----------------------CcceECCCCCChhCCHHHHHHHHHHc
Confidence 4789999999999999999999987753210 01135999999999999999999854
No 383
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.30 E-value=0.079 Score=43.70 Aligned_cols=80 Identities=21% Similarity=0.274 Sum_probs=50.1
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhc--CcchhhhhhhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSH--CFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNH 120 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H--~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~~H 120 (497)
.+..|-.|+..|.+...+..|+...| .-.-......=+.-|-..-.|..-+|..... ..|..|+..|.+...|..|
T Consensus 34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 113 (124)
T 2dlq_A 34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113 (124)
T ss_dssp CSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHH
T ss_pred CCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHH
Confidence 46889999999999999999998643 2111111111111122223344444443322 3499999999999999999
Q ss_pred HHHh
Q 010913 121 LHEA 124 (497)
Q Consensus 121 m~~~ 124 (497)
|...
T Consensus 114 ~~~~ 117 (124)
T 2dlq_A 114 MIKL 117 (124)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9854
No 384
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.27 E-value=0.12 Score=51.22 Aligned_cols=97 Identities=20% Similarity=0.154 Sum_probs=60.7
Q ss_pred hCCCCCCCCEEEEEcC--CCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 291 ENPSLMKGAVVMDIGC--GTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGC--GtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
....+.+|.+||-+|+ |.|.....+++. |+ +|++++.++..++.+++ ..|. +. .+-..
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~---~~g~--------------~~-~~d~~ 209 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKT---KFGF--------------DD-AFNYK 209 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH---TSCC--------------SE-EEETT
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HcCC--------------ce-EEecC
Confidence 4556788999999998 346666666665 88 89999999876665542 2232 11 11111
Q ss_pred ---chhh-cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 368 ---MVEE-LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 368 ---d~~~-l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
++.. +.. .....+|+|+... + . ..+....++|+|||.++
T Consensus 210 ~~~~~~~~~~~---~~~~~~d~vi~~~-g-------~--~~~~~~~~~l~~~G~~v 252 (345)
T 2j3h_A 210 EESDLTAALKR---CFPNGIDIYFENV-G-------G--KMLDAVLVNMNMHGRIA 252 (345)
T ss_dssp SCSCSHHHHHH---HCTTCEEEEEESS-C-------H--HHHHHHHTTEEEEEEEE
T ss_pred CHHHHHHHHHH---HhCCCCcEEEECC-C-------H--HHHHHHHHHHhcCCEEE
Confidence 1111 110 1125799999643 1 1 25677788999999987
No 385
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=93.19 E-value=0.13 Score=44.35 Aligned_cols=79 Identities=23% Similarity=0.320 Sum_probs=50.5
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcCcchhh--------hhhhhcCCccCceehhhhhHhhccc--ccccc--cCCcc
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHS--------VKTELRLDFYGSFKLINYIRSQVAE--NRCWI--CGLTC 111 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~--------~~~~~~ld~Y~~iKliNyiR~~~~~--~~c~~--C~~~~ 111 (497)
..+..|-.|++.|.+...+..||+..|.-.-.. ....=+.-|-..-.|..-++..... ..|.. |+..|
T Consensus 23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 102 (155)
T 2rpc_A 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF 102 (155)
T ss_dssp CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence 457899999999999999999999888754221 1111122233333344444443222 23776 88888
Q ss_pred CCHHHHHHHHH
Q 010913 112 QSNQDLQNHLH 122 (497)
Q Consensus 112 ~~~~~~~~Hm~ 122 (497)
.+...|..||.
T Consensus 103 ~~~~~L~~H~~ 113 (155)
T 2rpc_A 103 ARSENLKIHKR 113 (155)
T ss_dssp SCHHHHHHHHT
T ss_pred CCHHHHHHHHH
Confidence 88878888875
No 386
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.19 E-value=0.23 Score=48.77 Aligned_cols=93 Identities=23% Similarity=0.262 Sum_probs=58.4
Q ss_pred hCCCCCCCCEEEEEc-CCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 291 ENPSLMKGAVVMDIG-CGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvG-CGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
....+.+|.+||-+| +|. |.++..+|++ |+ +|++++. +.-.+.+++ .|. + .++..
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~-~~~~~~~~~----lGa--------------~--~~i~~ 203 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTAS-KRNHAFLKA----LGA--------------E--QCINY 203 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEEC-HHHHHHHHH----HTC--------------S--EEEET
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEec-cchHHHHHH----cCC--------------C--EEEeC
Confidence 445678999999997 554 7788888887 88 8999984 443555543 343 1 12222
Q ss_pred chhh-cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 368 MVEE-LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 368 d~~~-l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.-.+ +.. ....+|+|+-.. + -. .+....++|+|||+++
T Consensus 204 ~~~~~~~~----~~~g~D~v~d~~-g--------~~-~~~~~~~~l~~~G~iv 242 (321)
T 3tqh_A 204 HEEDFLLA----ISTPVDAVIDLV-G--------GD-VGIQSIDCLKETGCIV 242 (321)
T ss_dssp TTSCHHHH----CCSCEEEEEESS-C--------HH-HHHHHGGGEEEEEEEE
T ss_pred CCcchhhh----hccCCCEEEECC-C--------cH-HHHHHHHhccCCCEEE
Confidence 1111 211 125699999532 1 12 2366789999999988
No 387
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.14 E-value=0.027 Score=56.25 Aligned_cols=95 Identities=20% Similarity=0.296 Sum_probs=59.8
Q ss_pred CCCCCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec--
Q 010913 292 NPSLMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG-- 367 (497)
Q Consensus 292 ~~~~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g-- 367 (497)
...+ +|.+||-+|+|. |.++..+|++ |+.+|++++.++.-++.+++. . +. ++..
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a-----------------~~--v~~~~~ 217 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--A-----------------DR--LVNPLE 217 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--C-----------------SE--EECTTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--H-----------------Hh--ccCcCc
Confidence 4566 899999999864 6677777776 877899999998766555432 1 11 1111
Q ss_pred -chh-hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 368 -MVE-ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 368 -d~~-~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
++. .+.. + . ...+|+|+... + . ...+....+.|+|+|.++.
T Consensus 218 ~~~~~~~~~-~-~-~~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 218 EDLLEVVRR-V-T-GSGVEVLLEFS-G----N----EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp SCHHHHHHH-H-H-SSCEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred cCHHHHHHH-h-c-CCCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 111 1110 0 1 34699999542 1 1 2345667789999999873
No 388
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.98 E-value=0.12 Score=51.85 Aligned_cols=90 Identities=17% Similarity=0.278 Sum_probs=55.8
Q ss_pred CEEEEEcCCC-CHhH-HHHH-Hc-CCCEEEEEeCCHH---HHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 299 AVVMDIGCGT-GILS-LFAA-QA-GASRVIAVEASEK---MAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 299 ~~VLDvGCGt-G~ls-~~la-~~-G~~~V~gvD~S~~---~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
.+||-+|+|. |.++ ..+| ++ |+.+|++++.++. -.+.+++ .|. +.+.....++.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa--------------~~v~~~~~~~~~ 235 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA--------------TYVDSRQTPVED 235 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC--------------EEEETTTSCGGG
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC--------------cccCCCccCHHH
Confidence 8999999864 6677 7888 76 8866999999886 5665543 342 111000011111
Q ss_pred cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
+. .. .+.+|+|+-.. + . ...+....++|+|||+++
T Consensus 236 i~---~~-~gg~Dvvid~~-g----~----~~~~~~~~~~l~~~G~iv 270 (357)
T 2b5w_A 236 VP---DV-YEQMDFIYEAT-G----F----PKHAIQSVQALAPNGVGA 270 (357)
T ss_dssp HH---HH-SCCEEEEEECS-C----C----HHHHHHHHHHEEEEEEEE
T ss_pred HH---Hh-CCCCCEEEECC-C----C----hHHHHHHHHHHhcCCEEE
Confidence 11 12 23799998532 1 1 234666778999999987
No 389
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=92.96 E-value=0.1 Score=41.24 Aligned_cols=80 Identities=18% Similarity=0.256 Sum_probs=49.0
Q ss_pred CCCcceec--CCCCCCCHHHHHHHhhhhcCcchhhhh-hhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHH
Q 010913 44 ESGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVK-TELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQ 118 (497)
Q Consensus 44 ~~~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~-~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~ 118 (497)
..+..|-+ |+..|.+...+..||+..++-..-... ..=+.-|-..-.|..-++..... ..|..|+..|.+...|.
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 92 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence 35788998 999999999999999875542111100 00111222222333444433222 34888888888888888
Q ss_pred HHHHH
Q 010913 119 NHLHE 123 (497)
Q Consensus 119 ~Hm~~ 123 (497)
.||.-
T Consensus 93 ~H~~~ 97 (100)
T 2ebt_A 93 LHMKR 97 (100)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88864
No 390
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.94 E-value=0.15 Score=50.98 Aligned_cols=99 Identities=18% Similarity=0.204 Sum_probs=61.2
Q ss_pred hCCCCCCCCEEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 291 ENPSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
....+.+|.+||-+|+ | .|.++..+++. |+ +|++++.++.-++.+++. |. + .++..
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~--~~~~~ 219 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL----GA--------------K--RGINY 219 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TC--------------S--EEEET
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CC--------------C--EEEeC
Confidence 4567789999999954 3 36677777776 88 899999999887777653 32 1 11211
Q ss_pred chhhccccc-CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 368 MVEELGESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 368 d~~~l~~~l-~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.-.++...+ ......+|+|+... +. . .+....+.|+|||.++.
T Consensus 220 ~~~~~~~~~~~~~~~g~Dvvid~~-g~-----~----~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 220 RSEDFAAVIKAETGQGVDIILDMI-GA-----A----YFERNIASLAKDGCLSI 263 (353)
T ss_dssp TTSCHHHHHHHHHSSCEEEEEESC-CG-----G----GHHHHHHTEEEEEEEEE
T ss_pred CchHHHHHHHHHhCCCceEEEECC-CH-----H----HHHHHHHHhccCCEEEE
Confidence 111110000 01145799999653 21 1 34556789999999873
No 391
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.83 E-value=0.17 Score=50.66 Aligned_cols=97 Identities=18% Similarity=0.295 Sum_probs=59.8
Q ss_pred hCCCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 291 ENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
....+.+|.+||-.|++ .|.....+++. |+ +|++++.++.-++.+++ .|. + .++..
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga--------------~--~~~d~ 222 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ----NGA--------------H--EVFNH 222 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTC--------------S--EEEET
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH----cCC--------------C--EEEeC
Confidence 45567889999999973 35566666665 88 89999999877665543 332 1 11111
Q ss_pred ---ch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 368 ---MV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 368 ---d~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+. ..+.. ......+|+|+... +. ..+....++|+|||.++.
T Consensus 223 ~~~~~~~~~~~--~~~~~~~D~vi~~~-G~---------~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 223 REVNYIDKIKK--YVGEKGIDIIIEML-AN---------VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp TSTTHHHHHHH--HHCTTCEEEEEESC-HH---------HHHHHHHHHEEEEEEEEE
T ss_pred CCchHHHHHHH--HcCCCCcEEEEECC-Ch---------HHHHHHHHhccCCCEEEE
Confidence 11 11110 01234799999653 21 235566789999999884
No 392
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=92.56 E-value=0.074 Score=41.12 Aligned_cols=78 Identities=18% Similarity=0.265 Sum_probs=44.3
Q ss_pred CCcceec--CCCCCCCHHHHHHHhhhhcCcchhhhh-hhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHHH
Q 010913 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVK-TELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQN 119 (497)
Q Consensus 45 ~~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~-~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~~ 119 (497)
.+..|-+ |+..|.+...+..||+..++-..-... ..=+.-|...-.|..-++..... ..|..|+..|.+...|..
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 83 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL 83 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence 4678999 999999999999999865442110000 00111122222233333332222 237777777777777777
Q ss_pred HHH
Q 010913 120 HLH 122 (497)
Q Consensus 120 Hm~ 122 (497)
||.
T Consensus 84 H~~ 86 (89)
T 2wbs_A 84 HMK 86 (89)
T ss_dssp HGG
T ss_pred HHH
Confidence 764
No 393
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.53 E-value=0.25 Score=48.45 Aligned_cols=88 Identities=17% Similarity=0.208 Sum_probs=57.1
Q ss_pred EEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 300 VVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 300 ~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
+||-+|+ | .|.++..+|++ |+ +|++++.++.-.+.+++. |. +.+ +-..+.....
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga--------------~~v-i~~~~~~~~~--- 205 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL----GA--------------NRI-LSRDEFAESR--- 205 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH----TC--------------SEE-EEGGGSSCCC---
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CC--------------CEE-EecCCHHHHH---
Confidence 3999997 3 47788888887 88 899999999877777653 32 111 1111111111
Q ss_pred CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+....+|+|+-.. + ...+....++|+|+|+++.
T Consensus 206 ~~~~~~~d~v~d~~-g---------~~~~~~~~~~l~~~G~iv~ 239 (324)
T 3nx4_A 206 PLEKQLWAGAIDTV-G---------DKVLAKVLAQMNYGGCVAA 239 (324)
T ss_dssp SSCCCCEEEEEESS-C---------HHHHHHHHHTEEEEEEEEE
T ss_pred hhcCCCccEEEECC-C---------cHHHHHHHHHHhcCCEEEE
Confidence 23346799988532 1 1266777889999999883
No 394
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.50 E-value=0.31 Score=48.08 Aligned_cols=96 Identities=23% Similarity=0.272 Sum_probs=59.6
Q ss_pred hCCCCCCCCEEEEEcC--CCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 291 ENPSLMKGAVVMDIGC--GTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGC--GtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
....+.+|.+||-.|+ |.|.....+++. |+ +|++++.++..++.+++. |. .. ++..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----g~---------------~~-~~d~ 197 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL----GC---------------HH-TINY 197 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TC---------------SE-EEET
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC---------------CE-EEEC
Confidence 3456788999999996 456666666665 88 999999998777666542 32 11 1111
Q ss_pred ---ch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 368 ---MV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 368 ---d~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
+. ..+.. . .....+|+|+... +. ..+....++|+|||.++
T Consensus 198 ~~~~~~~~i~~-~-~~~~~~d~vi~~~-g~---------~~~~~~~~~l~~~G~iv 241 (333)
T 1wly_A 198 STQDFAEVVRE-I-TGGKGVDVVYDSI-GK---------DTLQKSLDCLRPRGMCA 241 (333)
T ss_dssp TTSCHHHHHHH-H-HTTCCEEEEEECS-CT---------TTHHHHHHTEEEEEEEE
T ss_pred CCHHHHHHHHH-H-hCCCCCeEEEECC-cH---------HHHHHHHHhhccCCEEE
Confidence 11 11110 0 1234699999653 21 23556678999999987
No 395
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.47 E-value=0.1 Score=51.13 Aligned_cols=62 Identities=21% Similarity=0.200 Sum_probs=43.0
Q ss_pred CceEEEecchhhcccccCCCCCceeEEEecccccccc-----------------ChhhHHHHHHHHhccccCCcEEeccC
Q 010913 360 GKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCLL-----------------YESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 360 ~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~-----------------~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
.++++++||..+... .++.++||+|++++.-.... +...+..++.++.++|||||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~--~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLA--SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHT--TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHh--hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 467899999988531 24678999999997432110 01123567888999999999998654
Q ss_pred c
Q 010913 423 A 423 (497)
Q Consensus 423 ~ 423 (497)
.
T Consensus 98 ~ 98 (297)
T 2zig_A 98 G 98 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 396
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.37 E-value=0.25 Score=49.75 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=55.6
Q ss_pred CCCCCEEEEEc-CC-CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 295 LMKGAVVMDIG-CG-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 295 ~~~~~~VLDvG-CG-tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
+.+|.+||-+| +| .|.++..+|+. |+ +|++++ ++.-.+.+ +..|. + .++...-.+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~----~~lGa--------------~--~v~~~~~~~ 238 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELV----RKLGA--------------D--DVIDYKSGS 238 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHH----HHTTC--------------S--EEEETTSSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHH----HHcCC--------------C--EEEECCchH
Confidence 67899999999 34 37777777776 87 899998 65544444 33443 1 112111111
Q ss_pred cccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 372 LGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 372 l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
+...+ .....+|+|+-.. +. ....+....++|++||.++.
T Consensus 239 ~~~~~-~~~~g~D~vid~~-g~-------~~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 239 VEEQL-KSLKPFDFILDNV-GG-------STETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp HHHHH-HTSCCBSEEEESS-CT-------THHHHGGGGBCSSSCCEEEE
T ss_pred HHHHH-hhcCCCCEEEECC-CC-------hhhhhHHHHHhhcCCcEEEE
Confidence 10000 0124699998542 11 11244566789999999873
No 397
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.30 E-value=0.38 Score=47.60 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=58.6
Q ss_pred CCCCCCEEEEEcCCCC-HhHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh-
Q 010913 294 SLMKGAVVMDIGCGTG-ILSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE- 370 (497)
Q Consensus 294 ~~~~~~~VLDvGCGtG-~ls~~la~-~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~- 370 (497)
...+|.+||-+|+|.+ .++..+++ +|..+|+++|.++.-++.+++ .|.. ..+..-..+..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~-------------~~i~~~~~~~~~ 222 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGAD-------------VTINSGDVNPVD 222 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCS-------------EEEEC-CCCHHH
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCe-------------EEEeCCCCCHHH
Confidence 4578999999999874 45555555 466699999999976655543 3421 11222222221
Q ss_pred hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 371 ~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+.. + .....+|+++-... . ...+....+.|+|+|.++.
T Consensus 223 ~v~~-~-t~g~g~d~~~~~~~-----~----~~~~~~~~~~l~~~G~~v~ 261 (348)
T 4eez_A 223 EIKK-I-TGGLGVQSAIVCAV-----A----RIAFEQAVASLKPMGKMVA 261 (348)
T ss_dssp HHHH-H-TTSSCEEEEEECCS-----C----HHHHHHHHHTEEEEEEEEE
T ss_pred Hhhh-h-cCCCCceEEEEecc-----C----cchhheeheeecCCceEEE
Confidence 1110 0 23445777774321 1 3356667789999999874
No 398
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=92.25 E-value=0.092 Score=40.85 Aligned_cols=51 Identities=25% Similarity=0.417 Sum_probs=37.4
Q ss_pred CcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHH
Q 010913 46 GFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 46 ~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
+..|-.|+..|.+...+..||+..++- ....|..|+..|.+...|..||..
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~---------------------------~~~~C~~C~k~f~~~~~L~~H~~~ 53 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTHTGE---------------------------KPFACDICGRKFARSDERKRHRDI 53 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCC---------------------------CCEECTTTCCEESSHHHHHHHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHHcCCC---------------------------CCccCCCCCCccCCHHHHHHHHHH
Confidence 678999999999999999999864331 012366777777777777777654
No 399
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.17 E-value=0.48 Score=40.44 Aligned_cols=94 Identities=13% Similarity=0.084 Sum_probs=55.4
Q ss_pred CCEEEEEcCCC-CH-hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 298 GAVVMDIGCGT-GI-LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 298 ~~~VLDvGCGt-G~-ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
..+|+-+|||. |. ++..|.+.|. .|+++|.++..++.+++ . .+.++.||..+...-
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~-----------------g~~~i~gd~~~~~~l 64 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----R-----------------GVRAVLGNAANEEIM 64 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----T-----------------TCEEEESCTTSHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----c-----------------CCCEEECCCCCHHHH
Confidence 35788899875 43 3444555577 89999999987765543 2 346788887553210
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.......+|+|++.. ... .....+-...+.+.|+..++
T Consensus 65 ~~a~i~~ad~vi~~~-----~~~-~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 65 QLAHLECAKWLILTI-----PNG-YEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp HHTTGGGCSEEEECC-----SCH-HHHHHHHHHHHHHCSSSEEE
T ss_pred HhcCcccCCEEEEEC-----CCh-HHHHHHHHHHHHHCCCCeEE
Confidence 012235789888532 111 11222333456677887766
No 400
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.10 E-value=0.36 Score=48.21 Aligned_cols=97 Identities=14% Similarity=0.056 Sum_probs=58.7
Q ss_pred hCCCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 291 ENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
....+.+|.+||-.|++ .|.....+++. |+ +|++++.++..++.+++. |. ...+-..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----g~---------------~~~~~~~ 215 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL----GA---------------AAGFNYK 215 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TC---------------SEEEETT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CC---------------cEEEecC
Confidence 44567889999999953 35566666665 88 899999999877766432 32 1111111
Q ss_pred --ch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 368 --MV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 368 --d~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
+. ..+.. ......+|+|+... +. . .+....++|++||.++
T Consensus 216 ~~~~~~~~~~--~~~~~~~d~vi~~~-G~-----~----~~~~~~~~l~~~G~iv 258 (354)
T 2j8z_A 216 KEDFSEATLK--FTKGAGVNLILDCI-GG-----S----YWEKNVNCLALDGRWV 258 (354)
T ss_dssp TSCHHHHHHH--HTTTSCEEEEEESS-CG-----G----GHHHHHHHEEEEEEEE
T ss_pred ChHHHHHHHH--HhcCCCceEEEECC-Cc-----h----HHHHHHHhccCCCEEE
Confidence 11 11110 01234799999653 21 1 2455568899999987
No 401
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=91.98 E-value=0.079 Score=38.83 Aligned_cols=51 Identities=27% Similarity=0.580 Sum_probs=41.6
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLH 122 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~ 122 (497)
-|..|-.|++.|.....+..||+. |. | .....|..||+.|.....|..||.
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~-Ht----------~----------------ekp~~C~~C~k~F~~~~~L~~H~~ 53 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRA-HL----------G----------------YRPRSCPECGKCFRDQSEVNRHLK 53 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHH-HH----------T----------------CCCEECTTTCCEESSHHHHHHHGG
T ss_pred CCccCCCCCCEeCCHHHHHHHHHH-hC----------C----------------CcCeECCCCCCCcCCHHHHHHHhC
Confidence 478999999999999999999974 31 1 011349999999999999999986
No 402
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=91.95 E-value=0.11 Score=38.73 Aligned_cols=52 Identities=25% Similarity=0.503 Sum_probs=41.8
Q ss_pred CCCcceec--CCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHH
Q 010913 44 ESGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHL 121 (497)
Q Consensus 44 ~~~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm 121 (497)
..+..|-+ |++.|.+...+..|++..++- ....|..|+..|.....|..||
T Consensus 17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~---------------------------~~~~C~~C~~~f~~~~~l~~H~ 69 (73)
T 1f2i_G 17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQ---------------------------KPFQCRICMRNFSRSDHLTTHI 69 (73)
T ss_dssp CCCEECSSTTBCCEESSHHHHHHHHHHHHCC---------------------------CCEECTTTCCEESCHHHHHHHH
T ss_pred CCccCCcCCCCCCccCCHHHHHHHHHhhCCC---------------------------CCeECCCCCchhCCHHHHHHHH
Confidence 35789986 999999999999999854320 1134999999999999999998
Q ss_pred H
Q 010913 122 H 122 (497)
Q Consensus 122 ~ 122 (497)
.
T Consensus 70 ~ 70 (73)
T 1f2i_G 70 R 70 (73)
T ss_dssp T
T ss_pred H
Confidence 5
No 403
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.82 E-value=0.25 Score=49.33 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=59.2
Q ss_pred hCCCCCCC--CEEEEEcCCC--CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 291 ENPSLMKG--AVVMDIGCGT--GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 291 ~~~~~~~~--~~VLDvGCGt--G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
....+.+| .+||-.|++. |.....+++. |+++|++++.++.-++.+++. .|. . .++
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~---------------~-~~~ 212 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGF---------------D-AAI 212 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCC---------------S-EEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCC---------------c-eEE
Confidence 33456788 9999999843 5555566655 877999999998666555431 332 1 111
Q ss_pred ec---ch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 366 QG---MV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 366 ~g---d~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.. ++ ..+. ....+.+|+++... + ...+....++|++||+++
T Consensus 213 d~~~~~~~~~~~---~~~~~~~d~vi~~~-G---------~~~~~~~~~~l~~~G~iv 257 (357)
T 2zb4_A 213 NYKKDNVAEQLR---ESCPAGVDVYFDNV-G---------GNISDTVISQMNENSHII 257 (357)
T ss_dssp ETTTSCHHHHHH---HHCTTCEEEEEESC-C---------HHHHHHHHHTEEEEEEEE
T ss_pred ecCchHHHHHHH---HhcCCCCCEEEECC-C---------HHHHHHHHHHhccCcEEE
Confidence 11 11 1111 01122799999653 2 135667778999999987
No 404
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.82 E-value=0.26 Score=53.94 Aligned_cols=123 Identities=17% Similarity=0.109 Sum_probs=68.3
Q ss_pred CCCEEEEEcCCCCHhHHHHHHc-----------CC--CEEEEEeC---CHHHHHHHH-----------HHHHhCCCCCCC
Q 010913 297 KGAVVMDIGCGTGILSLFAAQA-----------GA--SRVIAVEA---SEKMAAVAT-----------QIAKDNDFWWDR 349 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~-----------G~--~~V~gvD~---S~~~i~~A~-----------~~~~~~gl~~~~ 349 (497)
+.-+|+|+|.|+|...+.+.++ .. -+++++|. +...+..|- +.+......- .
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~-~ 136 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPL-A 136 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCC-S
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccC-C
Confidence 4569999999999876655442 11 27999999 444443322 2221110000 0
Q ss_pred CCCCC-CCCCCCceEEEecchhhcccccCC-CCCceeEEEeccccccccChhh-HHHHHHHHhccccCCcEEecc
Q 010913 350 PQSEG-NINNAGKMEVVQGMVEELGESMQI-QPHSVDVLVSEWMGYCLLYESM-LSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 350 ~~~~~-~~~~~~~i~~i~gd~~~l~~~l~~-~~~~fDvIvs~~~~~~l~~~~~-l~~vL~~~~r~LkpgG~li~~ 421 (497)
..+.. .....-.++++.||+.+.-..++. ....+|+++...+.... ...+ ...++..+.++++|||.+...
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-NPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-ChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 00000 000112678899999876322211 14689999976532111 1122 256888899999999998843
No 405
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.73 E-value=0.94 Score=43.22 Aligned_cols=108 Identities=19% Similarity=0.243 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCC------------HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEAS------------EKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S------------~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~ 360 (497)
..+++||-.|++.|+ ++..+++.|+ +|+.+|.+ ...++.+...+...+ .
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~ 71 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---------------R 71 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---------------S
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC---------------C
Confidence 568899999998876 4566777798 89999987 555555555555444 4
Q ss_pred ceEEEecchhhcccccCC------CCCceeEEEeccccccc----cChhhHH-----------HHHHHHhccccCCcEEe
Q 010913 361 KMEVVQGMVEELGESMQI------QPHSVDVLVSEWMGYCL----LYESMLS-----------SVLFARDQWLKPGGAIL 419 (497)
Q Consensus 361 ~i~~i~gd~~~l~~~l~~------~~~~fDvIvs~~~~~~l----~~~~~l~-----------~vL~~~~r~LkpgG~li 419 (497)
++.++.+|+.+...-..+ .-+.+|++|.+. +... .....+. .+++.+...++.+|.++
T Consensus 72 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA-g~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 150 (287)
T 3pxx_A 72 KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA-GICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASII 150 (287)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC-CCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEE
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC-CcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEE
Confidence 788999998765310000 013689999764 2111 1122222 23455667777888877
Q ss_pred c
Q 010913 420 P 420 (497)
Q Consensus 420 ~ 420 (497)
.
T Consensus 151 ~ 151 (287)
T 3pxx_A 151 T 151 (287)
T ss_dssp E
T ss_pred E
Confidence 3
No 406
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.71 E-value=0.1 Score=52.32 Aligned_cols=94 Identities=22% Similarity=0.249 Sum_probs=57.0
Q ss_pred CCC-CCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh
Q 010913 294 SLM-KGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (497)
Q Consensus 294 ~~~-~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~ 370 (497)
.+. +|.+||-+|+|. |.++..+|++ |+ +|++++.++.-.+.+++ ..|. +.+ +-..+..
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~---~lGa--------------~~v-i~~~~~~ 236 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQ---DLGA--------------DDY-VIGSDQA 236 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHT---TSCC--------------SCE-EETTCHH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH---HcCC--------------cee-eccccHH
Confidence 456 899999999874 6677777776 88 89999999865554442 3343 111 1111211
Q ss_pred hcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 371 ELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 371 ~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.+. .. .+.+|+|+-.. +. . ..+....++|+|||.++
T Consensus 237 ~~~---~~-~~g~D~vid~~-g~----~----~~~~~~~~~l~~~G~iv 272 (357)
T 2cf5_A 237 KMS---EL-ADSLDYVIDTV-PV----H----HALEPYLSLLKLDGKLI 272 (357)
T ss_dssp HHH---HS-TTTEEEEEECC-CS----C----CCSHHHHTTEEEEEEEE
T ss_pred HHH---Hh-cCCCCEEEECC-CC----h----HHHHHHHHHhccCCEEE
Confidence 121 11 23699999542 11 1 12344567999999987
No 407
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.71 E-value=0.35 Score=37.77 Aligned_cols=62 Identities=18% Similarity=0.154 Sum_probs=44.7
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
....|-.|++.|.+...+..||+..|.=.-.. -.|.. .-..|..|+..|.+...|..||.-.
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~-------~~~~c-----------~~~~C~~C~k~f~~~~~L~~H~~~H 85 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ-------NNHVC-----------YWEECPREGKSFKAKYKLVNHIRVH 85 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTC-------SCCCC-----------CCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCCC-------Cccce-----------eccCCCCCCcccCCHHHHHHHHHhc
Confidence 45679999999999999999999766421100 00100 0035999999999999999999853
No 408
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.65 E-value=0.31 Score=53.22 Aligned_cols=122 Identities=20% Similarity=0.178 Sum_probs=69.4
Q ss_pred CCCEEEEEcCCCCHhHHHHHHc-----------CC--CEEEEEeC---CHHHHHHHHH-----------HHHhCCCCCCC
Q 010913 297 KGAVVMDIGCGTGILSLFAAQA-----------GA--SRVIAVEA---SEKMAAVATQ-----------IAKDNDFWWDR 349 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~-----------G~--~~V~gvD~---S~~~i~~A~~-----------~~~~~gl~~~~ 349 (497)
+.-+|||+|-|||...+.+.+. .. -+++++|. +...+..+.. ....... ..
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~--~~ 143 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPM--PL 143 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCC--CC
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcc--cC
Confidence 3469999999999865554332 11 26899999 7766653332 2211100 00
Q ss_pred CCC-CC-CCCCCCceEEEecchhhcccccCCC-CCceeEEEeccccccccChhh-HHHHHHHHhccccCCcEEecc
Q 010913 350 PQS-EG-NINNAGKMEVVQGMVEELGESMQIQ-PHSVDVLVSEWMGYCLLYESM-LSSVLFARDQWLKPGGAILPD 421 (497)
Q Consensus 350 ~~~-~~-~~~~~~~i~~i~gd~~~l~~~l~~~-~~~fDvIvs~~~~~~l~~~~~-l~~vL~~~~r~LkpgG~li~~ 421 (497)
.-. .. .....-.++++.||+.+.-..+... ...||+|+...+.... ...+ -..++..+.++++|||.+...
T Consensus 144 ~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 144 PGCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp SEEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred CCceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-ChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 000 00 0001135678889987763222111 4679999976533221 1222 257889999999999998843
No 409
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.64 E-value=0.18 Score=40.71 Aligned_cols=76 Identities=22% Similarity=0.185 Sum_probs=47.9
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhh-cccccccccCCccCCHHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQ-VAENRCWICGLTCQSNQDLQNHLHE 123 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~-~~~~~c~~C~~~~~~~~~~~~Hm~~ 123 (497)
.+..|-.|.+.|.+...+..||+. |. -......=+.-|...-.|..-++.. .....|..|+..|.+...|..||..
T Consensus 15 ~~~~C~~C~~~f~~~~~l~~H~~~-H~--~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~ 91 (107)
T 1wjp_A 15 EVYQCRLCNAKLSSLLEQGSHERL-CR--NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91 (107)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH-HH--HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHH
T ss_pred cCeECCCCCCccCCHHHHHHHHHH-CC--CCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHH
Confidence 478999999999999999999986 41 0001111122222222333333311 1123499999999999999999973
No 410
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=91.62 E-value=0.074 Score=33.33 Aligned_cols=27 Identities=33% Similarity=0.551 Sum_probs=24.7
Q ss_pred CcceecCCCCCCCHHHHHHHhhhhcCc
Q 010913 46 GFLCLFCDAGYSSCDTLFEHCRLSHCF 72 (497)
Q Consensus 46 ~~~CLFC~~~~~s~~~~l~Hm~~~H~F 72 (497)
.-.|-||.+.++++..++.|.++.|..
T Consensus 9 kqhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 9 KQHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 457999999999999999999999974
No 411
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=91.34 E-value=0.077 Score=45.47 Aligned_cols=79 Identities=15% Similarity=0.268 Sum_probs=52.0
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcc--cccccccCCccCCHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVA--ENRCWICGLTCQSNQDLQNHLH 122 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~--~~~c~~C~~~~~~~~~~~~Hm~ 122 (497)
-+..|-.|++.|.+...+..||+. |.=.-+.....=+--|...-.|..-+|.-.. ...|..||..|.+...|..||.
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~ 99 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNI-HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIK 99 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHH-HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHHH-cCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhH
Confidence 468999999999999999999985 5211111111112223344445555554322 2349999999999999999998
Q ss_pred Hh
Q 010913 123 EA 124 (497)
Q Consensus 123 ~~ 124 (497)
..
T Consensus 100 ~h 101 (133)
T 2lt7_A 100 SV 101 (133)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 412
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=91.29 E-value=0.22 Score=52.15 Aligned_cols=60 Identities=10% Similarity=0.012 Sum_probs=45.6
Q ss_pred CCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 298 GAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 298 ~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.-+|+|+-||.|.+++.+.++|...|.++|+++.+++.-+.+... .+...++.+|+.++.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~----------------~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYC----------------DPATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCC----------------CTTTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhccc----------------CCCcceeccchhhhh
Confidence 468999999999999999999997899999999776655444211 023456778888764
No 413
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.11 E-value=0.21 Score=37.63 Aligned_cols=54 Identities=26% Similarity=0.461 Sum_probs=43.5
Q ss_pred CCcceec--CCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccc--cCCccCCHHHHHHH
Q 010913 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWI--CGLTCQSNQDLQNH 120 (497)
Q Consensus 45 ~~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~--C~~~~~~~~~~~~H 120 (497)
.+..|-+ |++.|.+...+..||+..|.= .....|.. |+..|.+...|..|
T Consensus 6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~--------------------------~~~~~C~~~~C~k~f~~~~~L~~H 59 (79)
T 2dlk_A 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIH--------------------------QKSFSCPEPACGKSFNFKKHLKEH 59 (79)
T ss_dssp SSEECSSTTTCCEESSHHHHHHHHHHGGGS--------------------------CCCEECSCTTTCCEESSHHHHHHH
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHHhCC--------------------------CCCeECCCCCCcCccCCHHHHHHH
Confidence 4688998 999999999999999866631 01124888 99999999999999
Q ss_pred HHHh
Q 010913 121 LHEA 124 (497)
Q Consensus 121 m~~~ 124 (497)
|.-.
T Consensus 60 ~~~H 63 (79)
T 2dlk_A 60 MKLH 63 (79)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9843
No 414
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.10 E-value=0.29 Score=49.04 Aligned_cols=90 Identities=16% Similarity=0.137 Sum_probs=54.6
Q ss_pred CCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCH---HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 298 GAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASE---KMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 298 ~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~---~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
|.+||-+|+|. |.++..+++. |+ +|++++.++ .-++.+++. |. ..+..+ ++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~----ga-----------------~~v~~~--~~ 236 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET----KT-----------------NYYNSS--NG 236 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH----TC-----------------EEEECT--TC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh----CC-----------------ceechH--HH
Confidence 89999999853 5556666665 88 999999987 666665543 32 111111 11
Q ss_pred ccccCCCCCceeEEEeccccccccChhhHHHHH-HHHhccccCCcEEec
Q 010913 373 GESMQIQPHSVDVLVSEWMGYCLLYESMLSSVL-FARDQWLKPGGAILP 420 (497)
Q Consensus 373 ~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL-~~~~r~LkpgG~li~ 420 (497)
...+.-....+|+|+... + .. ..+ ....+.|+|+|.++.
T Consensus 237 ~~~~~~~~~~~d~vid~~-g----~~----~~~~~~~~~~l~~~G~iv~ 276 (366)
T 2cdc_A 237 YDKLKDSVGKFDVIIDAT-G----AD----VNILGNVIPLLGRNGVLGL 276 (366)
T ss_dssp SHHHHHHHCCEEEEEECC-C----CC----THHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHhCCCCCEEEECC-C----Ch----HHHHHHHHHHHhcCCEEEE
Confidence 100000014699999643 1 11 134 667889999999873
No 415
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.04 E-value=0.14 Score=51.60 Aligned_cols=43 Identities=26% Similarity=0.317 Sum_probs=32.7
Q ss_pred CCC-CCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHH
Q 010913 294 SLM-KGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVAT 337 (497)
Q Consensus 294 ~~~-~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~ 337 (497)
.+. +|.+||-+|+|. |.++..+|++ |+ +|++++.++.-++.++
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEAL 228 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHH
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 455 899999999864 6666777776 88 8999999986655444
No 416
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=90.93 E-value=0.17 Score=39.13 Aligned_cols=22 Identities=23% Similarity=0.548 Sum_probs=19.4
Q ss_pred cccccCCccCCHHHHHHHHHHh
Q 010913 103 RCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 103 ~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
.|..|+..|.+...|..||...
T Consensus 36 ~C~~C~~~f~~~~~l~~H~~~h 57 (90)
T 1a1h_A 36 QCRICMRNFSRSDHLTTHIRTH 57 (90)
T ss_dssp ECTTTCCEESCHHHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHc
Confidence 5999999999999999999843
No 417
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.64 E-value=0.87 Score=43.04 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCC--CCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh
Q 010913 296 MKGAVVMDIGCG--TGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (497)
Q Consensus 296 ~~~~~VLDvGCG--tG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~ 370 (497)
..+++||-.|++ .|+ ++..+++.|+ +|+.++.++...+.+.+.....+ ..++.++.+|+.
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~~~D~~ 69 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLD--------------RNDSIILPCDVT 69 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSS--------------SCCCEEEECCCS
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcC--------------CCCceEEeCCCC
Confidence 468899999987 565 5667777798 89999998766665555554433 136889999887
Q ss_pred hcccccCC------CCCceeEEEecccccc-------c--cChhhHH-----------HHHHHHhccccCCcEEe
Q 010913 371 ELGESMQI------QPHSVDVLVSEWMGYC-------L--LYESMLS-----------SVLFARDQWLKPGGAIL 419 (497)
Q Consensus 371 ~l~~~l~~------~~~~fDvIvs~~~~~~-------l--~~~~~l~-----------~vL~~~~r~LkpgG~li 419 (497)
+...-..+ ..+.+|++|.+.-... + .....+. .+++.+...++++|.++
T Consensus 70 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 144 (266)
T 3oig_A 70 NDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIV 144 (266)
T ss_dssp SSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEE
T ss_pred CHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEE
Confidence 64310000 0136899887531100 0 1111121 24556677788888877
No 418
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.59 E-value=0.36 Score=47.49 Aligned_cols=96 Identities=18% Similarity=0.150 Sum_probs=58.2
Q ss_pred CCCCCC-EEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 294 SLMKGA-VVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 294 ~~~~~~-~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
.+.+|. +||-+|+ | .|.++..+|++ |+ +|++++.++.-++.+++. |. +. ++..+-
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l----Ga--------------~~--v~~~~~ 204 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL----GA--------------SE--VISRED 204 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH----TC--------------SE--EEEHHH
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CC--------------cE--EEECCC
Confidence 456675 8999998 3 46677777776 88 799999987766666542 32 11 121111
Q ss_pred hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 370 ~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.+......+....+|+|+-.. + . ..+....++|+|||+++.
T Consensus 205 ~~~~~~~~~~~~~~d~vid~~-g----~-----~~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 205 VYDGTLKALSKQQWQGAVDPV-G----G-----KQLASLLSKIQYGGSVAV 245 (330)
T ss_dssp HCSSCCCSSCCCCEEEEEESC-C----T-----HHHHHHHTTEEEEEEEEE
T ss_pred chHHHHHHhhcCCccEEEECC-c----H-----HHHHHHHHhhcCCCEEEE
Confidence 000000012235799998542 1 1 246667789999999873
No 419
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.50 E-value=0.47 Score=48.96 Aligned_cols=45 Identities=22% Similarity=0.345 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHH
Q 010913 293 PSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (497)
Q Consensus 293 ~~~~~~~~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~ 338 (497)
..+.+|.+||-+|+ | .|.++..++++ |+ +|++++.++.-++.+++
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 56789999999998 3 36677777776 87 89999999887766643
No 420
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.39 E-value=0.32 Score=48.33 Aligned_cols=96 Identities=22% Similarity=0.243 Sum_probs=60.7
Q ss_pred hCCCCCCCCEEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEec
Q 010913 291 ENPSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 291 ~~~~~~~~~~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
....+.+|.+||-+|+ | .|.++..++++ |+ +|+++ .++.-++.+++. |. .. +.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l----Ga---------------~~--i~- 199 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL----GA---------------TP--ID- 199 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH----TS---------------EE--EE-
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc----CC---------------CE--ec-
Confidence 5567789999999995 3 36777777777 88 89999 888777666543 32 11 22
Q ss_pred chhhccccc--CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 368 MVEELGESM--QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 368 d~~~l~~~l--~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
.-.++...+ ......+|+|+-.. + . ..+....++|+|+|.++.
T Consensus 200 ~~~~~~~~~~~~~~~~g~D~vid~~-g----~-----~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 200 ASREPEDYAAEHTAGQGFDLVYDTL-G----G-----PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp TTSCHHHHHHHHHTTSCEEEEEESS-C----T-----HHHHHHHHHEEEEEEEEE
T ss_pred cCCCHHHHHHHHhcCCCceEEEECC-C----c-----HHHHHHHHHHhcCCeEEE
Confidence 111111000 01235799999542 1 1 255666789999999883
No 421
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=90.05 E-value=0.33 Score=39.53 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=50.1
Q ss_pred CCcceec--CCCCCCCHHHHHHHhhhhcCcchhhhh-hhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHHH
Q 010913 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVK-TELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQN 119 (497)
Q Consensus 45 ~~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~-~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~~ 119 (497)
.+..|-+ |+..|.+...+..||+..++-..-... ..=+.-|-..-.|..-++..... ..|..|+..|.+...|..
T Consensus 5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 84 (119)
T 2jp9_A 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT 84 (119)
T ss_dssp CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHH
Confidence 4688998 999999999999999865542110000 00111222233344444443322 349999999999999999
Q ss_pred HHHHh
Q 010913 120 HLHEA 124 (497)
Q Consensus 120 Hm~~~ 124 (497)
||...
T Consensus 85 H~~~h 89 (119)
T 2jp9_A 85 HTRTH 89 (119)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98743
No 422
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.87 E-value=0.25 Score=48.96 Aligned_cols=61 Identities=20% Similarity=0.130 Sum_probs=44.2
Q ss_pred CceEEEecchhhcccccCCCCCceeEEEeccccccc-----------cChhhHHHHHHHHhccccCCcEEeccC
Q 010913 360 GKMEVVQGMVEELGESMQIQPHSVDVLVSEWMGYCL-----------LYESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 360 ~~i~~i~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l-----------~~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
....+++||..+.-. .++.++||+|++.+.-... .+...+..++.++.++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~--~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLE--SFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGG--GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHh--hCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 467899999876422 2567899999998642211 012357788999999999999998643
No 423
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=89.69 E-value=2.6 Score=42.40 Aligned_cols=96 Identities=14% Similarity=0.046 Sum_probs=67.7
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccccc
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESM 376 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l 376 (497)
.+.+||.|+.+.|.++..++.. .++.+.=|-......+.++..|++.. ..+++... +
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~------------~~~~~~~~----~---- 94 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDE------------SSVKFLDS----T---- 94 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCG------------GGSEEEET----T----
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCc------------cceEeccc----c----
Confidence 5578999999999999988755 34555446666666778888998831 34665432 1
Q ss_pred CCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 377 QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 377 ~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.-.+..+|+|+.-+ -.....+...|..+...|+||+.++
T Consensus 95 ~~~~~~~~~v~~~l----pk~~~~l~~~L~~l~~~l~~~~~i~ 133 (375)
T 4dcm_A 95 ADYPQQPGVVLIKV----PKTLALLEQQLRALRKVVTSDTRII 133 (375)
T ss_dssp SCCCSSCSEEEEEC----CSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred cccccCCCEEEEEc----CCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 12356799998432 1234567788899999999999987
No 424
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=89.64 E-value=1.1 Score=42.80 Aligned_cols=79 Identities=24% Similarity=0.209 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.+|+++|--|++.|+ ++..+++.|+ +|+.+|.++..++.+.+.++..| .++.++++|+.+.
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g---------------~~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG---------------KEVLGVKADVSKK 68 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTSH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC---------------CcEEEEEccCCCH
Confidence 478999999999987 5667788898 89999999988887777777665 3788899998765
Q ss_pred ccc------cCCCCCceeEEEecc
Q 010913 373 GES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~------l~~~~~~fDvIvs~~ 390 (497)
..- ..-.-++.|++|.+.
T Consensus 69 ~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 69 KDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310 000125799999864
No 425
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=89.64 E-value=0.66 Score=46.29 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=29.3
Q ss_pred hCCCCCCC-CEEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCH
Q 010913 291 ENPSLMKG-AVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASE 330 (497)
Q Consensus 291 ~~~~~~~~-~~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~ 330 (497)
....+.+| .+||-+|+ | .|.++..+|+. |+ +|+++..+.
T Consensus 160 ~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~ 202 (364)
T 1gu7_A 160 HYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDR 202 (364)
T ss_dssp SSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCC
T ss_pred HhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCc
Confidence 33467789 99999997 3 47778888887 88 788886544
No 426
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.37 E-value=0.41 Score=38.21 Aligned_cols=51 Identities=20% Similarity=0.293 Sum_probs=41.5
Q ss_pred CCcceecCCCCC-CCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHH-HH
Q 010913 45 SGFLCLFCDAGY-SSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNH-LH 122 (497)
Q Consensus 45 ~~~~CLFC~~~~-~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~H-m~ 122 (497)
.+..|-.|++.| .+...+..||+.. += ....|-.|++.|.....|..| |.
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~~h-~~---------------------------k~~~C~~Cgk~F~~~~~L~~H~~~ 84 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHMENC-KQ---------------------------EMFTCHHCGKQLRSLAGMKYHVMA 84 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHHHH-CC---------------------------CCCCCSSSCCCCSSHHHHHHHHHH
T ss_pred CCcCCCCCCCCcccCHHHHHHHHHHH-CC---------------------------CCeECCCCCCeeCCHHHHHHHhHH
Confidence 468999999999 9999999999853 21 012599999999999999999 65
Q ss_pred H
Q 010913 123 E 123 (497)
Q Consensus 123 ~ 123 (497)
-
T Consensus 85 ~ 85 (96)
T 2ctd_A 85 N 85 (96)
T ss_dssp H
T ss_pred h
Confidence 3
No 427
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=89.12 E-value=0.29 Score=48.12 Aligned_cols=95 Identities=18% Similarity=0.151 Sum_probs=56.8
Q ss_pred CCCCCCC-EEEEEcC--CCCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 293 PSLMKGA-VVMDIGC--GTGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 293 ~~~~~~~-~VLDvGC--GtG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
..+.+|. +||-+|+ |.|.++..+|++ |+ +|++++.++.-++.+++ .|. +.+ +-..+
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa--------------~~~-i~~~~ 203 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV----LGA--------------KEV-LARED 203 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH----TTC--------------SEE-EECC-
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH----cCC--------------cEE-EecCC
Confidence 3456675 8999997 346777778876 88 79999999766665543 343 111 11111
Q ss_pred h--hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEec
Q 010913 369 V--EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILP 420 (497)
Q Consensus 369 ~--~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~ 420 (497)
. ..+. ......+|+|+-.. + . . .+....++|+|||+++.
T Consensus 204 ~~~~~~~---~~~~~~~d~vid~~-g----~-~----~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 204 VMAERIR---PLDKQRWAAAVDPV-G----G-R----TLATVLSRMRYGGAVAV 244 (328)
T ss_dssp -----------CCSCCEEEEEECS-T----T-T----THHHHHHTEEEEEEEEE
T ss_pred cHHHHHH---HhcCCcccEEEECC-c----H-H----HHHHHHHhhccCCEEEE
Confidence 1 1111 12234799998542 1 1 1 34556788999999873
No 428
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.82 E-value=1.2 Score=39.56 Aligned_cols=95 Identities=18% Similarity=0.124 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCC-CH-hHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 297 KGAVVMDIGCGT-GI-LSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 297 ~~~~VLDvGCGt-G~-ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.+.+|+-+|||. |. ++..|.+. |. .|+++|.++..++.++ ..| +.++.+|..+..
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~----~~g-----------------~~~~~gd~~~~~ 95 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHR----SEG-----------------RNVISGDATDPD 95 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHH----HTT-----------------CCEEECCTTCHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHH----HCC-----------------CCEEEcCCCCHH
Confidence 466889999875 33 34455566 77 8999999997665443 233 345666654321
Q ss_pred cccCC-CCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 374 ESMQI-QPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 374 ~~l~~-~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.-... ....+|+|+... ........++ ...+.+.|++.++
T Consensus 96 ~l~~~~~~~~ad~vi~~~-----~~~~~~~~~~-~~~~~~~~~~~ii 136 (183)
T 3c85_A 96 FWERILDTGHVKLVLLAM-----PHHQGNQTAL-EQLQRRNYKGQIA 136 (183)
T ss_dssp HHHTBCSCCCCCEEEECC-----SSHHHHHHHH-HHHHHTTCCSEEE
T ss_pred HHHhccCCCCCCEEEEeC-----CChHHHHHHH-HHHHHHCCCCEEE
Confidence 00012 235689988532 1122222222 3445566777766
No 429
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.66 E-value=0.82 Score=42.97 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCCCH---hHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 297 KGAVVMDIGCGTGI---LSLFAAQ-AGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 297 ~~~~VLDvGCGtG~---ls~~la~-~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
++++||-.|++.|+ ++..|++ .|+ +|++++.++.....+.+.+...+ .++.++.+|+.+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dl~~~ 66 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG---------------LSPRFHQLDIDDL 66 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT---------------CCCEEEECCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC---------------CeeEEEECCCCCH
Confidence 56889988866554 3445666 687 89999999876665555554443 3678888888764
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
..-..+ ..+.+|+||.+.
T Consensus 67 ~~~~~~~~~~~~~~g~id~li~~A 90 (276)
T 1wma_A 67 QSIRALRDFLRKEYGGLDVLVNNA 90 (276)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECC
Confidence 310000 013689999753
No 430
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=88.63 E-value=0.059 Score=41.97 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=44.7
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
.+..|-.|+..|.+...+..|++..|+. .| .|..|+..|.+...|..||...
T Consensus 30 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~--------------------~~--------~c~~C~~~f~~~~~L~~H~~~~ 81 (88)
T 1llm_C 30 KPFACDICGRKFARSDERKRHRDIQHIL--------------------PI--------LEDKVEELLSKNYHLENEVARL 81 (88)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHTHH--------------------HH--------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCCCccCCHHHHHHHHHHhCCC--------------------cc--------hHHHHHHHHHHHhhhHHHHHHH
Confidence 4689999999999999999999988731 01 3888999999999999999976
Q ss_pred cc
Q 010913 125 YN 126 (497)
Q Consensus 125 ~~ 126 (497)
..
T Consensus 82 h~ 83 (88)
T 1llm_C 82 KK 83 (88)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 431
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.56 E-value=1.6 Score=36.88 Aligned_cols=70 Identities=17% Similarity=0.199 Sum_probs=43.7
Q ss_pred CCEEEEEcCCC-CH-hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 298 GAVVMDIGCGT-GI-LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 298 ~~~VLDvGCGt-G~-ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
.++|+-+|||. |. ++..|++.|. .|+++|.++..++.+++ . .+.++.+|+.+...-
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~----~-----------------~~~~~~gd~~~~~~l 63 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLED----E-----------------GFDAVIADPTDESFY 63 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----T-----------------TCEEEECCTTCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH----C-----------------CCcEEECCCCCHHHH
Confidence 45789999865 22 3444555587 89999999977655442 2 346778887653210
Q ss_pred cCCCCCceeEEEec
Q 010913 376 MQIQPHSVDVLVSE 389 (497)
Q Consensus 376 l~~~~~~fDvIvs~ 389 (497)
.......+|+|+..
T Consensus 64 ~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 64 RSLDLEGVSAVLIT 77 (141)
T ss_dssp HHSCCTTCSEEEEC
T ss_pred HhCCcccCCEEEEe
Confidence 01234578998854
No 432
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.46 E-value=0.41 Score=48.44 Aligned_cols=42 Identities=26% Similarity=0.257 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCC-CHhHHHHHH-cCCCEEEEEeCCHHHHHHHHH
Q 010913 296 MKGAVVMDIGCGT-GILSLFAAQ-AGASRVIAVEASEKMAAVATQ 338 (497)
Q Consensus 296 ~~~~~VLDvGCGt-G~ls~~la~-~G~~~V~gvD~S~~~i~~A~~ 338 (497)
.+|++|+-+|+|. |......++ .|+ +|+++|.++.-++.+.+
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDA 209 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHH
Confidence 4689999999864 433333333 388 89999999876665554
No 433
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=88.46 E-value=0.38 Score=40.04 Aligned_cols=51 Identities=25% Similarity=0.474 Sum_probs=38.2
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHHHHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHLHEA 124 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm~~~ 124 (497)
.+..|-.|++.|.+...+..||+. | . ....|..|+..|.....|..||...
T Consensus 73 ~~~~C~~C~k~f~~~~~l~~H~~~-H----~------------------------~~~~C~~C~k~f~~~~~l~~H~~~h 123 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVSLKQHIRY-T----E------------------------HTKVCPVCKKEFTSTDSALDHVCKK 123 (129)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHH-T----C------------------------CCCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred CCeECCCCCcccCCHhHHHHHHHH-C----C------------------------CCCCCCCCCcccCCHHHHHHHHHHH
Confidence 356777777777777777777764 4 0 1125999999999999999999854
No 434
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=88.46 E-value=0.86 Score=51.87 Aligned_cols=75 Identities=23% Similarity=0.110 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCCHhHHHHHHcCC-CEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc-
Q 010913 297 KGAVVMDIGCGTGILSLFAAQAGA-SRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE- 374 (497)
Q Consensus 297 ~~~~VLDvGCGtG~ls~~la~~G~-~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~- 374 (497)
+..+++|+-||.|.+++.+.++|. ..|.|+|+++.+++.-+.+. +...++.+|+.++..
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~-------------------p~~~~~~~DI~~l~~~ 599 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN-------------------PGSTVFTEDCNILLKL 599 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC-------------------TTSEEECSCHHHHHHH
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-------------------CCCccccccHHHHhhh
Confidence 446899999999999999999997 67889999998776544442 245667777654310
Q ss_pred --------c--cCC-CCCceeEEEecc
Q 010913 375 --------S--MQI-QPHSVDVLVSEW 390 (497)
Q Consensus 375 --------~--l~~-~~~~fDvIvs~~ 390 (497)
. ..+ ..+.+|+|+..+
T Consensus 600 ~~~~di~~~~~~~lp~~~~vDll~GGp 626 (1002)
T 3swr_A 600 VMAGETTNSRGQRLPQKGDVEMLCGGP 626 (1002)
T ss_dssp HHHTCSBCTTCCBCCCTTTCSEEEECC
T ss_pred ccchhhhhhhhhhcccCCCeeEEEEcC
Confidence 0 012 235799999754
No 435
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.20 E-value=2.7 Score=34.82 Aligned_cols=94 Identities=12% Similarity=0.147 Sum_probs=49.0
Q ss_pred CCEEEEEcCCC-CH-hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 298 GAVVMDIGCGT-GI-LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 298 ~~~VLDvGCGt-G~-ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
+.+|+-+|+|. |. ++..+++.|. .|+++|.++..++.+.+ .. .+.++.++..+....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~---~~-----------------~~~~~~~d~~~~~~l 62 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASA---EI-----------------DALVINGDCTKIKTL 62 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH---HC-----------------SSEEEESCTTSHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHH---hc-----------------CcEEEEcCCCCHHHH
Confidence 45788888854 22 2334445576 89999999876543332 12 235566665432100
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEE
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAI 418 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~l 418 (497)
.......+|+|+.... . ......+..+.+.++++-++
T Consensus 63 ~~~~~~~~d~vi~~~~-----~-~~~~~~~~~~~~~~~~~~ii 99 (140)
T 1lss_A 63 EDAGIEDADMYIAVTG-----K-EEVNLMSSLLAKSYGINKTI 99 (140)
T ss_dssp HHTTTTTCSEEEECCS-----C-HHHHHHHHHHHHHTTCCCEE
T ss_pred HHcCcccCCEEEEeeC-----C-chHHHHHHHHHHHcCCCEEE
Confidence 0112346899886421 1 12223344445557775433
No 436
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.15 E-value=0.47 Score=47.67 Aligned_cols=42 Identities=21% Similarity=0.225 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHH
Q 010913 297 KGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQI 339 (497)
Q Consensus 297 ~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~ 339 (497)
++++||-+|+|. |.....+++. |+ +|+++|.++.-++.+.+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~ 209 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETL 209 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHh
Confidence 458999999964 4444444444 88 999999998777666554
No 437
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=87.88 E-value=0.4 Score=39.41 Aligned_cols=77 Identities=21% Similarity=0.278 Sum_probs=39.7
Q ss_pred CCccee--cCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhccc--ccccc--cCCccCCHHHHH
Q 010913 45 SGFLCL--FCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWI--CGLTCQSNQDLQ 118 (497)
Q Consensus 45 ~~~~CL--FC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~--~~c~~--C~~~~~~~~~~~ 118 (497)
.+..|- .|+..|.+...+..||+ .|+-.. .....=+.-|-..-.|..-++..... ..|.. |+..|.+...|.
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~ 81 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLH-THGPRV-HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 81 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHG-GGSCCC-EECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred CcccCCCCCCcCccCCHHHHHHHHH-HcCCCC-eECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence 356676 67777777777777776 342110 00001111122222233333322211 23765 888888888888
Q ss_pred HHHHH
Q 010913 119 NHLHE 123 (497)
Q Consensus 119 ~Hm~~ 123 (497)
.||..
T Consensus 82 ~H~~~ 86 (124)
T 1ubd_C 82 THVRI 86 (124)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88864
No 438
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.76 E-value=1.8 Score=42.57 Aligned_cols=89 Identities=10% Similarity=0.088 Sum_probs=56.9
Q ss_pred CCEEEEEcCCC-C-HhHHHHHHcCCC-EEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh-cc
Q 010913 298 GAVVMDIGCGT-G-ILSLFAAQAGAS-RVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE-LG 373 (497)
Q Consensus 298 ~~~VLDvGCGt-G-~ls~~la~~G~~-~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~-l~ 373 (497)
..+|.-||+|. | .++..+++.|.. .|+++|.++..++.+.+ .|. +.-...+..+ .
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~----------------~~~~~~~~~~~~- 91 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGI----------------IDEGTTSIAKVE- 91 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTS----------------CSEEESCTTGGG-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCC----------------cchhcCCHHHHh-
Confidence 36899999886 3 356666667763 89999999977665542 343 1112223332 1
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
....|+|+... .......++..+...|+||.+++
T Consensus 92 ------~~~aDvVilav------p~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 92 ------DFSPDFVMLSS------PVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp ------GGCCSEEEECS------CGGGHHHHHHHHHHHSCTTCEEE
T ss_pred ------hccCCEEEEeC------CHHHHHHHHHHHhhccCCCcEEE
Confidence 23579988532 23345678888888899987765
No 439
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=87.70 E-value=0.44 Score=33.19 Aligned_cols=28 Identities=29% Similarity=0.590 Sum_probs=24.5
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcC
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHC 71 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~ 71 (497)
..+..|-.|++.|.....+..||+..|.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~ 37 (54)
T 2eps_A 10 GKPYICQSCGKGFSRPDHLNGHIKQVHT 37 (54)
T ss_dssp SCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred CCCeECCCCCcccCCHHHHHHHHHHhcC
Confidence 3578999999999999999999986664
No 440
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=87.36 E-value=0.33 Score=39.52 Aligned_cols=55 Identities=18% Similarity=0.315 Sum_probs=42.5
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccccCCccCCHHHHHHHH
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWICGLTCQSNQDLQNHL 121 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~C~~~~~~~~~~~~Hm 121 (497)
..|..|-.|++.|.+...+..||+..|.-.. + ...-.|-.||..|.....|..||
T Consensus 16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~-------~----------------ekpf~C~~Cgk~F~~~~~L~~H~ 70 (102)
T 2ghf_A 16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVV-------L----------------NSSYVCVECNFLTKRYDALSEHN 70 (102)
T ss_dssp CSSEECSSCSCEESCHHHHHHHHHHHCSSCC-------C----------------SCCEEETTTTEEESSTHHHHTHH
T ss_pred CcCcCCCCCCCccCCHHHHHHHHHhhCCCCC-------C----------------CCCcCCCCCCcccCCHHHHHHHH
Confidence 3578999999999999999999987662100 0 01124999999999999999994
No 441
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=87.32 E-value=0.29 Score=37.09 Aligned_cols=24 Identities=17% Similarity=0.376 Sum_probs=16.7
Q ss_pred cce--ecCCCCCCCHHHHHHHhhhhc
Q 010913 47 FLC--LFCDAGYSSCDTLFEHCRLSH 70 (497)
Q Consensus 47 ~~C--LFC~~~~~s~~~~l~Hm~~~H 70 (497)
..| -.|++.|.+...+..||+..+
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~h~ 27 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred ccCCCCCCCcccCCHHHHHHHHHHhC
Confidence 456 667777777777777776543
No 442
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.20 E-value=2.6 Score=39.79 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=57.6
Q ss_pred CCCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
...+++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+ .++.++.+|+.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG---------------RRALSVGTDITD 71 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTC
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEEcCCCC
Confidence 3578999999999886 4667777798 89999999887776666665554 478899999876
Q ss_pred cccc------cCCCCCceeEEEecc
Q 010913 372 LGES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 372 l~~~------l~~~~~~fDvIvs~~ 390 (497)
...- +.-.-+.+|++|.+.
T Consensus 72 ~~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 72 DAQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECC
Confidence 5310 000124689999764
No 443
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.02 E-value=0.82 Score=46.00 Aligned_cols=98 Identities=18% Similarity=0.162 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCC-CHhHHH-HHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 296 MKGAVVMDIGCGT-GILSLF-AAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 296 ~~~~~VLDvGCGt-G~ls~~-la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.++++|+-+|+|. |..... ++..|+ +|+++|.++..++.+.+. .+. .+.....+..++.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~---~g~---------------~~~~~~~~~~~l~ 224 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDV---FGG---------------RVITLTATEANIK 224 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH---TTT---------------SEEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh---cCc---------------eEEEecCCHHHHH
Confidence 4568999999853 333332 333488 999999998766554432 221 2333222222322
Q ss_pred cccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 374 ESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 374 ~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
.. -..+|+|+..... .....+.-+.....+.+||||.++
T Consensus 225 ~~----~~~~DvVi~~~g~---~~~~~~~li~~~~l~~mk~gg~iV 263 (369)
T 2eez_A 225 KS----VQHADLLIGAVLV---PGAKAPKLVTRDMLSLMKEGAVIV 263 (369)
T ss_dssp HH----HHHCSEEEECCC----------CCSCHHHHTTSCTTCEEE
T ss_pred HH----HhCCCEEEECCCC---CccccchhHHHHHHHhhcCCCEEE
Confidence 11 1368999865311 100011112345567789999887
No 444
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=87.02 E-value=1.6 Score=41.84 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++||-.|++.|+ ++..+++.|+ +|+.++.+...++.+.+.+...+ .++.++.+|+.+.
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dv~d~ 89 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG---------------GQAIALEADVSDE 89 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT---------------CCEEEEECCTTCH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEEccCCCH
Confidence 568899999988876 4556777798 99999999877766655554433 4788899998764
Q ss_pred ccccC------CCCCceeEEEecc
Q 010913 373 GESMQ------IQPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~------~~~~~fDvIvs~~ 390 (497)
..-.. -.-+.+|++|.+.
T Consensus 90 ~~v~~~~~~~~~~~g~iD~lVnnA 113 (283)
T 3v8b_A 90 LQMRNAVRDLVLKFGHLDIVVANA 113 (283)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECC
Confidence 31000 0114689999764
No 445
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=86.99 E-value=0.33 Score=43.43 Aligned_cols=78 Identities=21% Similarity=0.271 Sum_probs=42.4
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHLH 122 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~~Hm~ 122 (497)
.+..|-.|+..|.+...+..||+..|+-..-. ...=+.-|...-.|..-++..... ..|..|+..|.+...|..||.
T Consensus 76 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~ 154 (190)
T 2i13_A 76 KPYKCPECGKSFSQRANLRAHQRTHTGEKPYA-CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR 154 (190)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHHTCCCEE-CTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred CCccCcccCCccCCHHHHHHHHHhcCCCCCCc-CCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHH
Confidence 35678888888888888888877655421100 001111122222233334333222 237777777777777777776
Q ss_pred H
Q 010913 123 E 123 (497)
Q Consensus 123 ~ 123 (497)
.
T Consensus 155 ~ 155 (190)
T 2i13_A 155 T 155 (190)
T ss_dssp H
T ss_pred h
Confidence 4
No 446
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=86.92 E-value=0.36 Score=43.14 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=52.2
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhccc--ccccccCCccCCHHHHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRCWICGLTCQSNQDLQNHLH 122 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~--~~c~~C~~~~~~~~~~~~Hm~ 122 (497)
.+..|-.|+..|.+...+..||+..|+-..- ....=+.-|-..-.|..-++..... ..|..|+..|.+...|..||.
T Consensus 48 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 126 (190)
T 2i13_A 48 KPYKCPECGKSFSDKKDLTRHQRTHTGEKPY-KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR 126 (190)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHCCCCE-ECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred CCccCCCcCchhCCHHHHHHHHHhcCCCCCc-cCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence 4789999999999999999999987653111 0111122233333344444443322 349999999999999999998
Q ss_pred Hh
Q 010913 123 EA 124 (497)
Q Consensus 123 ~~ 124 (497)
..
T Consensus 127 ~h 128 (190)
T 2i13_A 127 TH 128 (190)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 447
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=86.85 E-value=0.6 Score=40.50 Aligned_cols=38 Identities=26% Similarity=0.485 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCCC-CH-hHHHHHHcCCCEEEEEeCCHHHH
Q 010913 295 LMKGAVVMDIGCGT-GI-LSLFAAQAGASRVIAVEASEKMA 333 (497)
Q Consensus 295 ~~~~~~VLDvGCGt-G~-ls~~la~~G~~~V~gvD~S~~~i 333 (497)
..++.+|+-+|||. |. ++..|.+.|. .|+++|.++..+
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~ 55 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAF 55 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHH
Confidence 35678999999875 43 2334444577 899999987544
No 448
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=86.78 E-value=0.83 Score=39.02 Aligned_cols=78 Identities=18% Similarity=0.262 Sum_probs=47.9
Q ss_pred CcceecCCCCCCCHHHHHHHhhhhc--Ccchhhhhh-----hhcCCccCceehhhhhHhhcc--cccccc--cCCccCCH
Q 010913 46 GFLCLFCDAGYSSCDTLFEHCRLSH--CFDFHSVKT-----ELRLDFYGSFKLINYIRSQVA--ENRCWI--CGLTCQSN 114 (497)
Q Consensus 46 ~~~CLFC~~~~~s~~~~l~Hm~~~H--~Fd~~~~~~-----~~~ld~Y~~iKliNyiR~~~~--~~~c~~--C~~~~~~~ 114 (497)
+..|-.|++.|.+...+..||+..| .=.-..... .-+.-|...-.|..-++.... ...|.. |+..|.+.
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~ 82 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRL 82 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSH
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCH
Confidence 5689999999999999999999744 211111000 001112223334444444332 234875 99999999
Q ss_pred HHHHHHHHH
Q 010913 115 QDLQNHLHE 123 (497)
Q Consensus 115 ~~~~~Hm~~ 123 (497)
..|..||..
T Consensus 83 ~~l~~H~~~ 91 (155)
T 2gli_A 83 ENLKTHLRS 91 (155)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999975
No 449
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.76 E-value=2.5 Score=41.74 Aligned_cols=118 Identities=10% Similarity=0.055 Sum_probs=74.0
Q ss_pred CCEEEEEcCCC-C-HhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHh-------CCCCCCCCCCCCCCCCCCceEEEecc
Q 010913 298 GAVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKD-------NDFWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 298 ~~~VLDvGCGt-G-~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~-------~gl~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
..+|--||+|+ | .++..+|.+|. .|+.+|+++..++.+.++++. .|..... ......-.++++. .+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~---~~~~~~l~~i~~~-~~ 80 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGS---LSAEEQLSLISSC-TN 80 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSS---SCHHHHHHTEEEE-CC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCc---cCHHHHHhhcccc-cc
Confidence 46899999997 3 35667778898 899999999998887766542 2210000 0000000123332 23
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCceeEEeeec
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATMFVAGFG 431 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~~~~~~~ 431 (497)
+.+. -...|+|+=. +.....--..++.++.++++|+.+|.-++.++....+.
T Consensus 81 l~~a-------~~~ad~ViEa----v~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia 132 (319)
T 3ado_A 81 LAEA-------VEGVVHIQEC----VPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLF 132 (319)
T ss_dssp HHHH-------TTTEEEEEEC----CCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHH
T ss_pred hHhH-------hccCcEEeec----cccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhh
Confidence 3221 2357888732 33445566789999999999999999888877655544
No 450
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=86.68 E-value=1.1 Score=42.85 Aligned_cols=79 Identities=20% Similarity=0.204 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.+|+++|--|++.|+ .+..+++.|+ +|+.+|.++..++.+.+.+...| .++.++.+|+.+.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g---------------~~~~~~~~Dv~~~ 70 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKG---------------YDAHGVAFDVTDE 70 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT---------------CCEEECCCCTTCH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC---------------CcEEEEEeeCCCH
Confidence 579999999999887 5677888899 99999999988877777666665 3678888888664
Q ss_pred cc------ccCCCCCceeEEEecc
Q 010913 373 GE------SMQIQPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~------~l~~~~~~fDvIvs~~ 390 (497)
.. .+.-.-++.|++|.+.
T Consensus 71 ~~v~~~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 71 LAIEAAFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECC
Confidence 31 0111246799999864
No 451
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.49 E-value=2.4 Score=36.40 Aligned_cols=97 Identities=10% Similarity=0.033 Sum_probs=52.8
Q ss_pred CCEEEEEcCCC-CH-hHHHHHHcCCCEEEEEeCC-HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhccc
Q 010913 298 GAVVMDIGCGT-GI-LSLFAAQAGASRVIAVEAS-EKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGE 374 (497)
Q Consensus 298 ~~~VLDvGCGt-G~-ls~~la~~G~~~V~gvD~S-~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~ 374 (497)
..+|+-+|+|. |. +...|.+.|. .|+++|.+ +..++...... . ..+.++.||..+...
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~-~-----------------~~~~~i~gd~~~~~~ 63 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRL-G-----------------DNADVIPGDSNDSSV 63 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHH-C-----------------TTCEEEESCTTSHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhh-c-----------------CCCeEEEcCCCCHHH
Confidence 45688888753 22 2333444576 89999997 44333333221 1 246888898764321
Q ss_pred ccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 375 SMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 375 ~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
-....-...|+|++.. ........+....+.+.|...++
T Consensus 64 l~~a~i~~ad~vi~~~------~~d~~n~~~~~~a~~~~~~~~ii 102 (153)
T 1id1_A 64 LKKAGIDRCRAILALS------DNDADNAFVVLSAKDMSSDVKTV 102 (153)
T ss_dssp HHHHTTTTCSEEEECS------SCHHHHHHHHHHHHHHTSSSCEE
T ss_pred HHHcChhhCCEEEEec------CChHHHHHHHHHHHHHCCCCEEE
Confidence 0011245789888542 11233344445556666766665
No 452
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=86.33 E-value=2.1 Score=40.30 Aligned_cols=80 Identities=19% Similarity=0.195 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
..++++||-.|++.|+ ++..+++.|+ +|++++.++..++...+.+...+ .++.++.+|+.+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~ 89 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG---------------GEAESHACDLSH 89 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CEEEEEECCTTC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC---------------CceeEEEecCCC
Confidence 3578999999987765 3555666788 89999999887776666665554 478899999876
Q ss_pred cccccCC------CCCceeEEEecc
Q 010913 372 LGESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 372 l~~~l~~------~~~~fDvIvs~~ 390 (497)
...-..+ ..+.+|++|.+.
T Consensus 90 ~~~v~~~~~~~~~~~g~id~lv~~A 114 (262)
T 3rkr_A 90 SDAIAAFATGVLAAHGRCDVLVNNA 114 (262)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECC
Confidence 5310000 114689999763
No 453
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.28 E-value=2.9 Score=39.36 Aligned_cols=80 Identities=28% Similarity=0.311 Sum_probs=55.9
Q ss_pred CCCCEEEEEcC-CCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 296 MKGAVVMDIGC-GTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 296 ~~~~~VLDvGC-GtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
..+++||-.|+ |.|+ ++..+++.|+ +|+.++.+...++.+.+.+...+ ..++.++.+|+.+
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--------------~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLG--------------LGRVEAVVCDVTS 84 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTC--------------SSCEEEEECCTTC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcC--------------CCceEEEEeCCCC
Confidence 56889999998 6776 5666777898 89999999887776666654443 2478999999876
Q ss_pred cccccCC------CCCceeEEEecc
Q 010913 372 LGESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 372 l~~~l~~------~~~~fDvIvs~~ 390 (497)
...-..+ .-+.+|++|.+.
T Consensus 85 ~~~v~~~~~~~~~~~g~id~li~~A 109 (266)
T 3o38_A 85 TEAVDALITQTVEKAGRLDVLVNNA 109 (266)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECC
Confidence 5310000 013689999764
No 454
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=86.15 E-value=0.46 Score=38.63 Aligned_cols=77 Identities=22% Similarity=0.298 Sum_probs=49.7
Q ss_pred CCcceec--CCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhccc--ccc--cccCCccCCHHHHH
Q 010913 45 SGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAE--NRC--WICGLTCQSNQDLQ 118 (497)
Q Consensus 45 ~~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~--~~c--~~C~~~~~~~~~~~ 118 (497)
.+..|-+ |+..|.+...+..||+..++-.. .....=+.-|...-.|..-+|..... ..| ..|+..|.+...|.
T Consensus 35 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~ 113 (119)
T 2jp9_A 35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV 113 (119)
T ss_dssp CCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHH
T ss_pred CCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-ccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHH
Confidence 4678884 99999999999999987654211 11111122233333455555544332 348 78999999999999
Q ss_pred HHHH
Q 010913 119 NHLH 122 (497)
Q Consensus 119 ~Hm~ 122 (497)
.||.
T Consensus 114 ~H~~ 117 (119)
T 2jp9_A 114 RHHN 117 (119)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9986
No 455
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=86.14 E-value=0.32 Score=38.30 Aligned_cols=50 Identities=16% Similarity=0.289 Sum_probs=38.4
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHh
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRS 97 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~ 97 (497)
..++||-|.+.|.++. .|+.+.||..-...+.++||--=.-+---||.+.
T Consensus 20 d~iiClecGK~fK~Lk---RHL~~~hgltpeeYR~kwGlp~dyPmvA~~ya~~ 69 (87)
T 2jsp_A 20 DHIVCLECGGSFKSLK---RHLTTHHSMTPEEYREKWDLPVDYPMVAPAYAEA 69 (87)
T ss_dssp SCEECTBTCCEESBHH---HHHHHTTCSCHHHHHHHTTCGGGCCSBCTTTTTT
T ss_pred CceEecccchhhHHHH---HHHHHccCCCHHHHHHHhCCCCCCcccCHHHHHH
Confidence 4689999999999865 9999999999999999999743222333455444
No 456
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=86.10 E-value=2.4 Score=39.47 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~ 70 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG---------------GTAISVAVDVSDP 70 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CEEEEEECCTTSH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC---------------CcEEEEEccCCCH
Confidence 468899999988775 4566677788 89999999887776666665543 4788999998765
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
.....+ .-+.+|++|.+.
T Consensus 71 ~~~~~~~~~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 71 ESAKAMADRTLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310000 013689999764
No 457
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.08 E-value=2 Score=40.97 Aligned_cols=79 Identities=15% Similarity=0.125 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG---------------HDVDGSSCDVTST 85 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT---------------CCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEECCCCCH
Confidence 467899999988875 4566777798 89999999887776666665544 4788999998764
Q ss_pred ccccC------CCCCceeEEEecc
Q 010913 373 GESMQ------IQPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~------~~~~~fDvIvs~~ 390 (497)
..-.. -.-+.+|++|.+.
T Consensus 86 ~~v~~~~~~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 86 DEVHAAVAAAVERFGPIGILVNSA 109 (279)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECC
Confidence 31000 0114689999764
No 458
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=86.04 E-value=1.6 Score=48.07 Aligned_cols=120 Identities=22% Similarity=0.231 Sum_probs=75.1
Q ss_pred CEEEEEcCCCC--HhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCC-CCCCCCCCCCceEEEecchhhcccc
Q 010913 299 AVVMDIGCGTG--ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRP-QSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 299 ~~VLDvGCGtG--~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~-~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
++|--||+|+= .++..+|.+|. .|+.+|+++..++.+++.+...--..... ..........++.+ ..+...+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHHHH---
Confidence 68999999983 35666777788 99999999999888776553210000000 00000001123332 2333333
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCceeEEeeecC
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATMFVAGFGR 432 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~~~~~~~~ 432 (497)
...|+||=. +.....--..++.++..+++|+.+|.-++.++....+..
T Consensus 392 -----~~aDlVIEA----V~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~ 439 (742)
T 3zwc_A 392 -----STVDLVVEA----VFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS 439 (742)
T ss_dssp -----GSCSEEEEC----CCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT
T ss_pred -----hhCCEEEEe----ccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHh
Confidence 247888832 345556677899999999999999998888776655543
No 459
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.99 E-value=0.93 Score=45.46 Aligned_cols=94 Identities=15% Similarity=0.087 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.+|.+||-+|++ .|.++..+|++ |+ +|+++- ++.-++.++ ..|. + .++...-.++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~----~lGa--------------~--~vi~~~~~~~ 220 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAK----SRGA--------------E--EVFDYRAPNL 220 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHH----HTTC--------------S--EEEETTSTTH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHH----HcCC--------------c--EEEECCCchH
Confidence 788999999984 57788888887 88 899985 776555444 3443 1 1222111111
Q ss_pred cccc-CCCCCceeEEEeccccccccChhhHHHHHHHHhccc-cCCcEEec
Q 010913 373 GESM-QIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWL-KPGGAILP 420 (497)
Q Consensus 373 ~~~l-~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~L-kpgG~li~ 420 (497)
...+ ....+.+|+|+-.. + . ...+....+.| ++||+++.
T Consensus 221 ~~~v~~~t~g~~d~v~d~~-g----~----~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 221 AQTIRTYTKNNLRYALDCI-T----N----VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp HHHHHHHTTTCCCEEEESS-C----S----HHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHccCCccEEEECC-C----c----hHHHHHHHHHhhcCCCEEEE
Confidence 0000 11234599999532 1 1 23455566778 69999883
No 460
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.96 E-value=2.3 Score=41.08 Aligned_cols=79 Identities=22% Similarity=0.215 Sum_probs=56.7
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dv~d~ 92 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG---------------FDAHGVVCDVRHL 92 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC---------------CceEEEEccCCCH
Confidence 578899999998875 4566777788 89999999988877766666554 3788999998765
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
..-..+ ..+.+|++|.+.
T Consensus 93 ~~v~~~~~~~~~~~g~id~lvnnA 116 (301)
T 3tjr_A 93 DEMVRLADEAFRLLGGVDVVFSNA 116 (301)
T ss_dssp HHHHHHHHHHHHHHSSCSEEEECC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECC
Confidence 310000 013689999764
No 461
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=85.64 E-value=1.6 Score=41.00 Aligned_cols=78 Identities=18% Similarity=0.126 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG---------------GRIVARSLDARNE 68 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT---------------CEEEEEECCTTCH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CeEEEEECcCCCH
Confidence 467899999998876 4666777798 89999999877766666665554 4789999998765
Q ss_pred ccc------cCCCCCceeEEEecc
Q 010913 373 GES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~------l~~~~~~fDvIvs~~ 390 (497)
..- +.-. +.+|++|.+.
T Consensus 69 ~~v~~~~~~~~~~-g~id~lv~nA 91 (252)
T 3h7a_A 69 DEVTAFLNAADAH-APLEVTIFNV 91 (252)
T ss_dssp HHHHHHHHHHHHH-SCEEEEEECC
T ss_pred HHHHHHHHHHHhh-CCceEEEECC
Confidence 310 0001 5789999764
No 462
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=85.63 E-value=2.3 Score=42.16 Aligned_cols=42 Identities=19% Similarity=0.258 Sum_probs=29.7
Q ss_pred HHhCCCCCCCCEEEEEcC-C-CCHhHHHHHHc-CCCEEEEEeCCH
Q 010913 289 ILENPSLMKGAVVMDIGC-G-TGILSLFAAQA-GASRVIAVEASE 330 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGC-G-tG~ls~~la~~-G~~~V~gvD~S~ 330 (497)
+.....+.+|.+||-+|+ | .|.++..+|+. |+..|..++.++
T Consensus 159 l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 159 LMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203 (357)
T ss_dssp HHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred HHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 334456789999999997 3 47788888887 884445555543
No 463
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.23 E-value=1.2 Score=45.57 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=57.8
Q ss_pred CCEEEEEcCCC-CH-hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccc
Q 010913 298 GAVVMDIGCGT-GI-LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGES 375 (497)
Q Consensus 298 ~~~VLDvGCGt-G~-ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~ 375 (497)
+..|+-+|+|. |. ++..|.+.|. .|++||.++..++.+++ .| +.++.||+.+...-
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~----~g-----------------~~vi~GDat~~~~L 61 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRK----FG-----------------MKVFYGDATRMDLL 61 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHH----TT-----------------CCCEESCTTCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHh----CC-----------------CeEEEcCCCCHHHH
Confidence 35688888865 32 2334444577 89999999998876653 23 46788888664311
Q ss_pred cCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 376 MQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 376 l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
....-..+|+||+.. ........+....+.+.|...++
T Consensus 62 ~~agi~~A~~viv~~------~~~~~n~~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 62 ESAGAAKAEVLINAI------DDPQTNLQLTEMVKEHFPHLQII 99 (413)
T ss_dssp HHTTTTTCSEEEECC------SSHHHHHHHHHHHHHHCTTCEEE
T ss_pred HhcCCCccCEEEECC------CChHHHHHHHHHHHHhCCCCeEE
Confidence 112346789888532 12233334455567788887776
No 464
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=85.22 E-value=3.2 Score=39.59 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeC-CHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEA-SEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~-S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
..+++||-.|++.|+ ++..+++.|+ +|+.++. ++..++...+.+...+ .++.++.+|+.+
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~d 90 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG---------------ARVIFLRADLAD 90 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT---------------CCEEEEECCTTS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC---------------CcEEEEEecCCC
Confidence 568899999988876 4666777798 8999995 6655555555554444 478999999877
Q ss_pred cccccCC------CCCceeEEEecc
Q 010913 372 LGESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 372 l~~~l~~------~~~~fDvIvs~~ 390 (497)
...-..+ .-+.+|++|.+.
T Consensus 91 ~~~v~~~~~~~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 91 LSSHQATVDAVVAEFGRIDCLVNNA 115 (280)
T ss_dssp GGGHHHHHHHHHHHHSCCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5310000 013689999764
No 465
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.11 E-value=0.3 Score=35.61 Aligned_cols=54 Identities=22% Similarity=0.378 Sum_probs=42.0
Q ss_pred CCCcceecCCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhccccccc-ccCCccCCHHHHHHHHH
Q 010913 44 ESGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCW-ICGLTCQSNQDLQNHLH 122 (497)
Q Consensus 44 ~~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~-~C~~~~~~~~~~~~Hm~ 122 (497)
..+..|-+|++.|. ...+..|++. .+- ....|. .||..|.....|..||.
T Consensus 8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~---------------------------~p~~C~~~C~k~f~~~~~L~~H~~ 58 (66)
T 2eod_A 8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPR---------------------------LPVACPNQCGVGTVAREDLPGHLK 58 (66)
T ss_dssp CCEEECSSSCCEEE-HHHHHHHHHH-CSS---------------------------SEEECTTCCSCCEEETTTHHHHHH
T ss_pred CCCeeccccCCccC-HHHHHHHHHH-cCC---------------------------cCccCCcccCcccccHHHHHHHHH
Confidence 45799999999999 9999999985 331 012488 89999988888999986
Q ss_pred HhccCc
Q 010913 123 EAYNLK 128 (497)
Q Consensus 123 ~~~~~~ 128 (497)
.|++
T Consensus 59 --~hc~ 62 (66)
T 2eod_A 59 --DSCN 62 (66)
T ss_dssp --TTSS
T ss_pred --hhcc
Confidence 3554
No 466
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=84.97 E-value=2.5 Score=39.71 Aligned_cols=79 Identities=23% Similarity=0.271 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG---------------GKAIGLECNVTDE 73 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT---------------CCEEEEECCTTCH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEECCCCCH
Confidence 568899999988876 4566777798 89999999887776666665554 4788899988765
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
..-..+ .-+.+|++|.+.
T Consensus 74 ~~v~~~~~~~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 74 QHREAVIKAALDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310000 013689999764
No 467
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=84.96 E-value=2.2 Score=44.76 Aligned_cols=42 Identities=33% Similarity=0.304 Sum_probs=30.6
Q ss_pred CCCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHH
Q 010913 295 LMKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVAT 337 (497)
Q Consensus 295 ~~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~ 337 (497)
..+|++|+-+|+|. |......++. |+ +|+++|.++.-...|.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~ 314 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAM 314 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 46899999999875 4444444444 87 9999999987655443
No 468
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=84.92 E-value=0.71 Score=45.84 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=55.3
Q ss_pred HHhCCCCCCCCEEEEEcCC--CCHhHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEE
Q 010913 289 ILENPSLMKGAVVMDIGCG--TGILSLFAAQA-GASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVV 365 (497)
Q Consensus 289 i~~~~~~~~~~~VLDvGCG--tG~ls~~la~~-G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i 365 (497)
+.....+.+|.+||-.|++ .|.++..+|++ |..+|++++ ++.-.+.++ .|. +.+.-.
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga--------------~~~~~~ 193 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSV--------------THLFDR 193 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGS--------------SEEEET
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCC--------------cEEEcC
Confidence 3455677899999999983 36677778876 666999998 443333332 332 111111
Q ss_pred ecch-hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 366 QGMV-EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 366 ~gd~-~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
..+. ..+. ....+.+|+|+-.. + . . .+....++|+|||+++
T Consensus 194 ~~~~~~~~~---~~~~~g~Dvv~d~~-g----~----~-~~~~~~~~l~~~G~~v 235 (349)
T 4a27_A 194 NADYVQEVK---RISAEGVDIVLDCL-C----G----D-NTGKGLSLLKPLGTYI 235 (349)
T ss_dssp TSCHHHHHH---HHCTTCEEEEEEEC-C----------------CTTEEEEEEEE
T ss_pred CccHHHHHH---HhcCCCceEEEECC-C----c----h-hHHHHHHHhhcCCEEE
Confidence 1111 1111 12246799999532 1 1 1 2355678999999988
No 469
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.55 E-value=5.6 Score=39.07 Aligned_cols=111 Identities=10% Similarity=0.038 Sum_probs=65.1
Q ss_pred CEEEEEcCCC--CHhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-------hCCCCCCCCCCCCCCCCCCceEEEecch
Q 010913 299 AVVMDIGCGT--GILSLFAAQAGASRVIAVEASEKMAAVATQIAK-------DNDFWWDRPQSEGNINNAGKMEVVQGMV 369 (497)
Q Consensus 299 ~~VLDvGCGt--G~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~-------~~gl~~~~~~~~~~~~~~~~i~~i~gd~ 369 (497)
++|--||+|+ +.++..++++|. .|+++|.++..++.+.+.++ ..|+.... . .......++++. .+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~--~-~~~~~~~~i~~~-~~~ 81 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGS--L-SAEEQLSLISSC-TNL 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSS--S-CHHHHHHTEEEE-CCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccc--c-chHHHhhceEEe-CCH
Confidence 5788899986 345667778888 89999999998888766532 22321000 0 000000124433 233
Q ss_pred hhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCcee
Q 010913 370 EELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATM 425 (497)
Q Consensus 370 ~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~ 425 (497)
.+. -...|+|+.... ....-...++..+...++|+.+|+-++.++
T Consensus 82 ~ea-------v~~aDlVieavp----e~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i 126 (319)
T 2dpo_A 82 AEA-------VEGVVHIQECVP----ENLDLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp HHH-------TTTEEEEEECCC----SCHHHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred HHH-------HhcCCEEEEecc----CCHHHHHHHHHHHHhhCCCCeEEEEeCCCh
Confidence 322 245899985321 112334678888999999998877555443
No 470
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=84.54 E-value=3.5 Score=39.07 Aligned_cols=78 Identities=18% Similarity=0.237 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
-.+|+++|--|.+.|+ .+..+++.|+ +|+.+|.+.. +.+.+.++..| .++.++.+|+.+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g---------------~~~~~~~~Dv~d 67 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDG---------------GNASALLIDFAD 67 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTT---------------CCEEEEECCTTS
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhC---------------CcEEEEEccCCC
Confidence 4679999999999987 5777888899 8999998753 22334444554 368888888866
Q ss_pred cccc-cCCCCCceeEEEecc
Q 010913 372 LGES-MQIQPHSVDVLVSEW 390 (497)
Q Consensus 372 l~~~-l~~~~~~fDvIvs~~ 390 (497)
...- .-+..+.+|++|.+.
T Consensus 68 ~~~v~~~~~~g~iDiLVNNA 87 (247)
T 4hp8_A 68 PLAAKDSFTDAGFDILVNNA 87 (247)
T ss_dssp TTTTTTSSTTTCCCEEEECC
T ss_pred HHHHHHHHHhCCCCEEEECC
Confidence 4311 012346799999764
No 471
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=84.41 E-value=2.8 Score=39.79 Aligned_cols=78 Identities=18% Similarity=0.163 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 297 KGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 297 ~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
.+++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+ .++.++.+|+.+..
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dv~d~~ 66 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG---------------GTALAQVLDVTDRH 66 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT---------------CEEEEEECCTTCHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC---------------CcEEEEEcCCCCHH
Confidence 57899999988876 4566777798 89999999887776666665554 47888888886643
Q ss_pred cccCC------CCCceeEEEecc
Q 010913 374 ESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 374 ~~l~~------~~~~fDvIvs~~ 390 (497)
.-..+ .-+.+|++|.+.
T Consensus 67 ~v~~~~~~~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 67 SVAAFAQAAVDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 10000 114689999764
No 472
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.29 E-value=4 Score=38.58 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
...+++||-.|++.|+ ++..+++.|+ +|++++.++..++...+.+...+ .++.++.+|+.+
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dl~~ 91 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG---------------AKVHTFVVDCSN 91 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC---------------CeEEEEEeeCCC
Confidence 3578899999977664 3445666688 89999999876665555554443 368899998866
Q ss_pred cccc------cCCCCCceeEEEecc
Q 010913 372 LGES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 372 l~~~------l~~~~~~fDvIvs~~ 390 (497)
...- +.-.-+.+|+||.+.
T Consensus 92 ~~~v~~~~~~~~~~~g~iD~li~~A 116 (272)
T 1yb1_A 92 REDIYSSAKKVKAEIGDVSILVNNA 116 (272)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEECC
T ss_pred HHHHHHHHHHHHHHCCCCcEEEECC
Confidence 4310 000124689999764
No 473
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.22 E-value=2.9 Score=38.77 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|++++.++...+...+.++..+ .++.++.+|+.+.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~ 66 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG---------------FKARGLVLNISDI 66 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT---------------CCEEEEECCTTCH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CceEEEEecCCCH
Confidence 357899999987775 4566677788 89999999987776666666554 3788999988664
Q ss_pred ccc------cCCCCCceeEEEecc
Q 010913 373 GES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~------l~~~~~~fDvIvs~~ 390 (497)
..- +.-..+.+|++|.+.
T Consensus 67 ~~~~~~~~~~~~~~~~id~li~~A 90 (247)
T 3lyl_A 67 ESIQNFFAEIKAENLAIDILVNNA 90 (247)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310 001134689999764
No 474
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.20 E-value=5.3 Score=41.37 Aligned_cols=106 Identities=24% Similarity=0.272 Sum_probs=63.0
Q ss_pred CEEEEEcCCC-C-HhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhC-------C-CCCCCCCCCCCCCCCCceEEEecc
Q 010913 299 AVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN-------D-FWWDRPQSEGNINNAGKMEVVQGM 368 (497)
Q Consensus 299 ~~VLDvGCGt-G-~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~-------g-l~~~~~~~~~~~~~~~~i~~i~gd 368 (497)
.+|.-||+|+ | .++..++++|. .|+.+|.++..++.+++.+..+ | +.. .........+ ..+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~-------~~~~~~~~~i-~~~ 108 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNG-------QASAKPKLRF-SSS 108 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCEEE-ESC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCH-------HHHHHHHhhh-cCC
Confidence 5799999997 3 35666777787 8999999998887776543210 1 000 0000011222 334
Q ss_pred hhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCcee
Q 010913 369 VEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTATM 425 (497)
Q Consensus 369 ~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~~ 425 (497)
...+ ...|+||.... ....-...++..+...++|+.+|+.++..+
T Consensus 109 ~~~~--------~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~snTs~~ 153 (463)
T 1zcj_A 109 TKEL--------STVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCTNTSAL 153 (463)
T ss_dssp GGGG--------TTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred HHHH--------CCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEeCCCCc
Confidence 3222 35799985421 122234677888888999998887555443
No 475
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=84.10 E-value=2.6 Score=40.25 Aligned_cols=80 Identities=16% Similarity=0.139 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++||-.|++.|+ ++..+++.|+ +|++++.+..-.+.+.+.+...+ ..++.++.+|+.+.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--------------~~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSN--------------HENVVFHQLDVTDP 74 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--------------CCSEEEEECCTTSC
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--------------CCceEEEEccCCCc
Confidence 467899999988775 4556666788 99999999877766666555443 24789999998775
Q ss_pred -ccc------cCCCCCceeEEEecc
Q 010913 373 -GES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 373 -~~~------l~~~~~~fDvIvs~~ 390 (497)
... +.-..+.+|++|.+.
T Consensus 75 ~~~v~~~~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 75 IATMSSLADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECC
Confidence 210 000124689999764
No 476
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=83.96 E-value=2.4 Score=39.86 Aligned_cols=79 Identities=23% Similarity=0.289 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.++++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~Dv~~~ 67 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP---------------GQILTVQMDVRNT 67 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST---------------TCEEEEECCTTCH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CcEEEEEccCCCH
Confidence 468899999988775 4566777798 89999999887776666554332 4788999998764
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
..-..+ .-+.+|++|.+.
T Consensus 68 ~~v~~~~~~~~~~~g~id~lv~nA 91 (257)
T 3imf_A 68 DDIQKMIEQIDEKFGRIDILINNA 91 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310000 013689999764
No 477
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=83.83 E-value=1.4 Score=37.49 Aligned_cols=25 Identities=32% Similarity=0.578 Sum_probs=15.5
Q ss_pred Ccceec--CCCCCCCHHHHHHHhhhhc
Q 010913 46 GFLCLF--CDAGYSSCDTLFEHCRLSH 70 (497)
Q Consensus 46 ~~~CLF--C~~~~~s~~~~l~Hm~~~H 70 (497)
+..|-+ |++.|.+...+..||+..+
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~ 93 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRSHT 93 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred CccCCCCCCCCcccCHHHHHHHHHHcC
Confidence 456665 6666666666666666533
No 478
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=83.82 E-value=0.77 Score=26.15 Aligned_cols=25 Identities=20% Similarity=0.534 Sum_probs=21.0
Q ss_pred CcceecCCCCCCCHHHHHHHhhhhc
Q 010913 46 GFLCLFCDAGYSSCDTLFEHCRLSH 70 (497)
Q Consensus 46 ~~~CLFC~~~~~s~~~~l~Hm~~~H 70 (497)
+..|-.|++.|.+...+..||+..+
T Consensus 1 ~~~C~~C~k~f~~~~~l~~H~~~h~ 25 (27)
T 1znf_A 1 XYKCGLCERSFVEKSALSRHQRVHK 25 (27)
T ss_dssp -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred CccCCCCCCcCCCHHHHHHHHHHcC
Confidence 3579999999999999999998643
No 479
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.65 E-value=0.37 Score=48.83 Aligned_cols=42 Identities=24% Similarity=0.410 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCCC-CHhHHHHHHc-CCCEEEEEeCCHHHHHHHHH
Q 010913 296 MKGAVVMDIGCGT-GILSLFAAQA-GASRVIAVEASEKMAAVATQ 338 (497)
Q Consensus 296 ~~~~~VLDvGCGt-G~ls~~la~~-G~~~V~gvD~S~~~i~~A~~ 338 (497)
.++.+|+-+|+|. |......++. |+ +|+++|.++..++.+.+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 3678999999985 5554444444 98 89999999876655543
No 480
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.27 E-value=0.99 Score=44.57 Aligned_cols=60 Identities=17% Similarity=0.163 Sum_probs=43.1
Q ss_pred CceEEE-ecchhhcccccCCCCCceeEEEecccccccc---------ChhhHHHHHHHHhccccCCcEEeccC
Q 010913 360 GKMEVV-QGMVEELGESMQIQPHSVDVLVSEWMGYCLL---------YESMLSSVLFARDQWLKPGGAILPDT 422 (497)
Q Consensus 360 ~~i~~i-~gd~~~l~~~l~~~~~~fDvIvs~~~~~~l~---------~~~~l~~vL~~~~r~LkpgG~li~~~ 422 (497)
....++ +||..+... .++.++||+|+..+. |... +...+...|.++.++|+|||.+++..
T Consensus 37 ~~~~l~i~gD~l~~L~--~l~~~svDlI~tDPP-Y~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLA--KLPDDSVQLIICDPP-YNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp CEEEEEEECCHHHHHH--TSCTTCEEEEEECCC-SBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHH--hCccCCcCEEEECCC-CCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 456788 999976532 245779999999864 3222 23356778888999999999998543
No 481
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=82.61 E-value=4 Score=38.59 Aligned_cols=80 Identities=16% Similarity=0.165 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeC-CHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchh
Q 010913 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEA-SEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVE 370 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~-S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~ 370 (497)
...+++||-.|++.|+ ++..+++.|+ +|+.++. ++...+...+.+...+ .++.++.+|+.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~ 89 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKG---------------YKAAVIKFDAA 89 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT---------------CCEEEEECCTT
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC---------------CceEEEECCCC
Confidence 3578999999988876 4566777788 8999998 5555555555555554 37889999886
Q ss_pred hcccccCC------CCCceeEEEecc
Q 010913 371 ELGESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 371 ~l~~~l~~------~~~~fDvIvs~~ 390 (497)
+......+ ..+.+|++|.+.
T Consensus 90 ~~~~v~~~~~~~~~~~g~id~li~nA 115 (271)
T 4iin_A 90 SESDFIEAIQTIVQSDGGLSYLVNNA 115 (271)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 64310000 124689999764
No 482
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=82.47 E-value=4.1 Score=39.22 Aligned_cols=79 Identities=18% Similarity=0.237 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCC------------HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEAS------------EKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S------------~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~ 360 (497)
..+++||-.|++.|+ ++..+++.|+ +|+++|.+ +..++.+.+.+...+ .
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~ 89 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG---------------R 89 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---------------C
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC---------------C
Confidence 568999999998886 4666777798 89999987 555555555554444 4
Q ss_pred ceEEEecchhhcccccCC------CCCceeEEEecc
Q 010913 361 KMEVVQGMVEELGESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 361 ~i~~i~gd~~~l~~~l~~------~~~~fDvIvs~~ 390 (497)
++.++.+|+.+...-..+ .-+.+|++|.+.
T Consensus 90 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 90 RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 788999998765310000 114689998764
No 483
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=82.32 E-value=3.5 Score=38.81 Aligned_cols=80 Identities=23% Similarity=0.222 Sum_probs=55.2
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+- .++.++.+|+.+.
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGS--------------GKVIGVQTDVSDR 72 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSS--------------SCEEEEECCTTSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCC--------------CcEEEEEcCCCCH
Confidence 468899999988775 4556677798 899999998877766666554431 4788999998764
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
..-..+ .-+.+|++|.+.
T Consensus 73 ~~v~~~~~~~~~~~g~id~lvnnA 96 (262)
T 3pk0_A 73 AQCDALAGRAVEEFGGIDVVCANA 96 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECC
Confidence 310000 013689999764
No 484
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.29 E-value=3.6 Score=40.17 Aligned_cols=81 Identities=15% Similarity=0.114 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+. ..++.++.+|+.+.
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~-------------~~~~~~~~~Dl~~~ 71 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGS-------------GPEVMGVQLDVASR 71 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC-------------GGGEEEEECCTTCH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-------------CCeEEEEECCCCCH
Confidence 467899999999886 4566777788 899999998877766665554332 13788999998764
Q ss_pred ccc------cCCCCCceeEEEecc
Q 010913 373 GES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~------l~~~~~~fDvIvs~~ 390 (497)
..- +.-..+.+|++|.+.
T Consensus 72 ~~v~~~~~~~~~~~g~id~lv~nA 95 (319)
T 3ioy_A 72 EGFKMAADEVEARFGPVSILCNNA 95 (319)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECC
Confidence 310 000124689999764
No 485
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=82.20 E-value=0.95 Score=33.25 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=40.9
Q ss_pred CCCcceec--CCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccc--cCCccCCHHHHHH
Q 010913 44 ESGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWI--CGLTCQSNQDLQN 119 (497)
Q Consensus 44 ~~~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~--C~~~~~~~~~~~~ 119 (497)
..+..|-. |++.|.+...+..||+..++- ....|.+ |+..|.....|..
T Consensus 15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~---------------------------~~~~C~~~~C~k~f~~~~~l~~ 67 (72)
T 2epa_A 15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGE---------------------------KPFSCSWKGCERRFARSDELSR 67 (72)
T ss_dssp CCCEECSSTTTCCEESSHHHHHHHHHHHSSS---------------------------CSEECCCTTCCCEESSHHHHHH
T ss_pred cCceeCCCCCCccccCCHHHHHHHHHhcCCC---------------------------CCccCCCCCCCcccCCHHHHHh
Confidence 45789988 999999999999999754321 0124865 9999999999999
Q ss_pred HHH
Q 010913 120 HLH 122 (497)
Q Consensus 120 Hm~ 122 (497)
||.
T Consensus 68 H~~ 70 (72)
T 2epa_A 68 HRR 70 (72)
T ss_dssp HTT
T ss_pred Hhh
Confidence 874
No 486
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=81.99 E-value=4.3 Score=38.61 Aligned_cols=79 Identities=22% Similarity=0.295 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCC----------------HHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEAS----------------EKMAAVATQIAKDNDFWWDRPQSEGNI 356 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S----------------~~~i~~A~~~~~~~gl~~~~~~~~~~~ 356 (497)
..+++||-.|++.|+ ++..+++.|+ +|+++|.+ ...++...+.+...+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 75 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN------------ 75 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT------------
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC------------
Confidence 568999999999886 4666777798 89999987 555544444444433
Q ss_pred CCCCceEEEecchhhcccccCC------CCCceeEEEecc
Q 010913 357 NNAGKMEVVQGMVEELGESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 357 ~~~~~i~~i~gd~~~l~~~l~~------~~~~fDvIvs~~ 390 (497)
.++.++.+|+.+...-..+ .-+.+|++|.+.
T Consensus 76 ---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 112 (286)
T 3uve_A 76 ---RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANA 112 (286)
T ss_dssp ---CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred ---CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 4788999988764310000 013689999764
No 487
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=81.96 E-value=1.5 Score=39.00 Aligned_cols=50 Identities=18% Similarity=0.319 Sum_probs=0.0
Q ss_pred CCCCcceec--CCCCCCCHHHHHHHhhhhcCcchhhhhhhhcCCccCceehhhhhHhhcccccccc---cCCccCCHHHH
Q 010913 43 LESGFLCLF--CDAGYSSCDTLFEHCRLSHCFDFHSVKTELRLDFYGSFKLINYIRSQVAENRCWI---CGLTCQSNQDL 117 (497)
Q Consensus 43 ~~~~~~CLF--C~~~~~s~~~~l~Hm~~~H~Fd~~~~~~~~~ld~Y~~iKliNyiR~~~~~~~c~~---C~~~~~~~~~~ 117 (497)
...+..|-+ |++.|.+...+..||+..+| ..|.. |+..|.+...|
T Consensus 131 ~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~------------------------------~~C~~~~~C~~~f~~~~~l 180 (190)
T 1tf6_A 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG------------------------------YPCKKDDSCSFVGKTWTLY 180 (190)
T ss_dssp SSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS------------------------------CCCCSTTTCCCCCSCHHHH
T ss_pred CCCCccCCCCCCCchhcCHHHHHHHHHHhCC------------------------------CcCCCCCcCCCccccHHHH
Q ss_pred HHHHH
Q 010913 118 QNHLH 122 (497)
Q Consensus 118 ~~Hm~ 122 (497)
..||.
T Consensus 181 ~~H~~ 185 (190)
T 1tf6_A 181 LKHVA 185 (190)
T ss_dssp HHHHT
T ss_pred HHHHH
No 488
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.88 E-value=4.4 Score=38.45 Aligned_cols=80 Identities=21% Similarity=0.214 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeC-------------CHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 010913 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEA-------------SEKMAAVATQIAKDNDFWWDRPQSEGNINN 358 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~-------------S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~ 358 (497)
...+++||-.|++.|+ ++..+++.|+ +|+++|. ++..++.+.+.+...+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 76 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-------------- 76 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--------------
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--------------
Confidence 3578999999998876 4666777798 8999997 5666655555555444
Q ss_pred CCceEEEecchhhcccccCC------CCCceeEEEecc
Q 010913 359 AGKMEVVQGMVEELGESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 359 ~~~i~~i~gd~~~l~~~l~~------~~~~fDvIvs~~ 390 (497)
.++.++.+|+.+...-..+ .-+.+|++|.+.
T Consensus 77 -~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 77 -RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp -CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred -CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4788888888664310000 014689999764
No 489
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=81.83 E-value=3.5 Score=37.90 Aligned_cols=77 Identities=16% Similarity=0.051 Sum_probs=50.9
Q ss_pred CCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-hCCCCCCCCCCCCCCCCCCceEEEecchhhcc
Q 010913 298 GAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAK-DNDFWWDRPQSEGNINNAGKMEVVQGMVEELG 373 (497)
Q Consensus 298 ~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~-~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~ 373 (497)
+++||-.|++.|+ ++..+++.|+ +|+.++.+..-++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~ 65 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQG---------------VEVFYHHLDVSKAE 65 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC---------------CCEEEEECCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcC---------------CeEEEEEeccCCHH
Confidence 5789999987765 4556666788 89999999876665554443 223 47889999987653
Q ss_pred cccCCC------CCceeEEEecc
Q 010913 374 ESMQIQ------PHSVDVLVSEW 390 (497)
Q Consensus 374 ~~l~~~------~~~fDvIvs~~ 390 (497)
.-..+- -+.+|++|.+.
T Consensus 66 ~v~~~~~~~~~~~g~id~li~~A 88 (235)
T 3l77_A 66 SVEEFSKKVLERFGDVDVVVANA 88 (235)
T ss_dssp HHHHHCC-HHHHHSSCSEEEECC
T ss_pred HHHHHHHHHHHhcCCCCEEEECC
Confidence 110011 13689999763
No 490
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.64 E-value=6.4 Score=37.26 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=53.0
Q ss_pred EEEEEcCCC-C-HhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhcccccC
Q 010913 300 VVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEELGESMQ 377 (497)
Q Consensus 300 ~VLDvGCGt-G-~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l~~~l~ 377 (497)
+|.-||||. | .++..+++.|. +|+++|.++..++.+. ..|. ...+ ..+..+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~----~~g~---------------~~~~-~~~~~~------ 54 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAV----ERQL---------------VDEA-GQDLSL------ 54 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH----HTTS---------------CSEE-ESCGGG------
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH----hCCC---------------Cccc-cCCHHH------
Confidence 577889886 3 24555666687 8999999987665443 2343 1111 222222
Q ss_pred CCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEe
Q 010913 378 IQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAIL 419 (497)
Q Consensus 378 ~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li 419 (497)
. ...|+|+... .......++..+...++||.+++
T Consensus 55 ~--~~~D~vi~av------~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 55 L--QTAKIIFLCT------PIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp G--TTCSEEEECS------CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred h--CCCCEEEEEC------CHHHHHHHHHHHHhhCCCCCEEE
Confidence 2 4689998542 23356678888888898887765
No 491
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=81.41 E-value=0.76 Score=37.67 Aligned_cols=80 Identities=15% Similarity=0.245 Sum_probs=50.1
Q ss_pred CCcceecCCCCCCCHHHHHHHhhhhcCcchhhhh-hhhcCCccCceehhhhhHhhccc--ccccc--cCCccCCHHHHHH
Q 010913 45 SGFLCLFCDAGYSSCDTLFEHCRLSHCFDFHSVK-TELRLDFYGSFKLINYIRSQVAE--NRCWI--CGLTCQSNQDLQN 119 (497)
Q Consensus 45 ~~~~CLFC~~~~~s~~~~l~Hm~~~H~Fd~~~~~-~~~~ld~Y~~iKliNyiR~~~~~--~~c~~--C~~~~~~~~~~~~ 119 (497)
.+..|-.|+..|.+...+..||+..++-..-... ..=+.-|...-.|..-+|..... ..|.. |+..|.+...|..
T Consensus 33 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~ 112 (124)
T 1ubd_C 33 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS 112 (124)
T ss_dssp CCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHH
T ss_pred CCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHH
Confidence 3678999999999999999999865542111100 00111222333344444443322 34965 9999999999999
Q ss_pred HHHHh
Q 010913 120 HLHEA 124 (497)
Q Consensus 120 Hm~~~ 124 (497)
||...
T Consensus 113 H~~~H 117 (124)
T 1ubd_C 113 HILTH 117 (124)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99853
No 492
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=81.35 E-value=4 Score=39.20 Aligned_cols=76 Identities=20% Similarity=0.236 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
.+|+++|--|++.|+ .+..+++.|+ +|+.+|.++..++.+.+.+ + .++..+.+|+.+.
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g---------------~~~~~~~~Dv~~~ 87 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---G---------------GGAVGIQADSANL 87 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C---------------TTCEEEECCTTCH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---C---------------CCeEEEEecCCCH
Confidence 679999999999987 5677788899 9999999988776554433 2 3567788887664
Q ss_pred ccc------cCCCCCceeEEEecc
Q 010913 373 GES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~------l~~~~~~fDvIvs~~ 390 (497)
..- +.-.-++.|++|.+.
T Consensus 88 ~~v~~~~~~~~~~~G~iDiLVNNA 111 (273)
T 4fgs_A 88 AELDRLYEKVKAEAGRIDVLFVNA 111 (273)
T ss_dssp HHHHHHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310 001135799999764
No 493
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=81.24 E-value=0.93 Score=26.29 Aligned_cols=26 Identities=19% Similarity=0.542 Sum_probs=22.7
Q ss_pred CcceecCCCCCCCHHHHHHHhhhhcC
Q 010913 46 GFLCLFCDAGYSSCDTLFEHCRLSHC 71 (497)
Q Consensus 46 ~~~CLFC~~~~~s~~~~l~Hm~~~H~ 71 (497)
+..|-.|+..|.....+..|++..|+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~h~~ 27 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIKTKHS 27 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcc
Confidence 46799999999999999999987664
No 494
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=81.21 E-value=5.3 Score=37.10 Aligned_cols=79 Identities=27% Similarity=0.232 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|++++.++.......+.++..+ .++.++.+|+.+.
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~D~~~~ 74 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG---------------HDVSSVVMDVTNT 74 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTCH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC---------------CceEEEEecCCCH
Confidence 457899999977664 3445666688 89999999876655545544433 3688999988764
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
..-..+ ..+.+|+||.+.
T Consensus 75 ~~~~~~~~~~~~~~~~id~vi~~A 98 (260)
T 3awd_A 75 ESVQNAVRSVHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310000 013689998753
No 495
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.07 E-value=5.4 Score=37.54 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCceEEEecchhh
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKD-NDFWWDRPQSEGNINNAGKMEVVQGMVEE 371 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~-~gl~~~~~~~~~~~~~~~~i~~i~gd~~~ 371 (497)
..+++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+.. .+- .++.++.+|+.+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~--------------~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPG--------------ARLFASVCDVLD 70 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTT--------------CCEEEEECCTTC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCC--------------ceEEEEeCCCCC
Confidence 568899999998876 4566777798 899999998877666555543 321 358889998876
Q ss_pred cccc------cCCCCCceeEEEecc
Q 010913 372 LGES------MQIQPHSVDVLVSEW 390 (497)
Q Consensus 372 l~~~------l~~~~~~fDvIvs~~ 390 (497)
...- +.-.-+.+|++|.+.
T Consensus 71 ~~~v~~~~~~~~~~~g~id~lvnnA 95 (265)
T 3lf2_A 71 ALQVRAFAEACERTLGCASILVNNA 95 (265)
T ss_dssp HHHHHHHHHHHHHHHCSCSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4310 000124689999764
No 496
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=81.03 E-value=5.4 Score=37.10 Aligned_cols=79 Identities=19% Similarity=0.180 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|++++.++..++.+.+.+...+ .++.++.+|+.+.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~Dv~~~ 68 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAG---------------AKVHVLELDVADR 68 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---------------CCEEEEECCTTCH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC---------------CcEEEEECCCCCH
Confidence 457899999988765 4556666788 89999999876665555554433 3688888888664
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
..-..+ .-+.+|++|.+.
T Consensus 69 ~~~~~~~~~~~~~~g~id~lv~nA 92 (247)
T 2jah_A 69 QGVDAAVASTVEALGGLDILVNNA 92 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310000 014689999763
No 497
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=80.95 E-value=8 Score=36.93 Aligned_cols=108 Identities=11% Similarity=0.077 Sum_probs=62.8
Q ss_pred CEEEEEcCCC-C-HhHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhC---------CCCCCCCCCCCCCCCCCceEEEec
Q 010913 299 AVVMDIGCGT-G-ILSLFAAQAGASRVIAVEASEKMAAVATQIAKDN---------DFWWDRPQSEGNINNAGKMEVVQG 367 (497)
Q Consensus 299 ~~VLDvGCGt-G-~ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~---------gl~~~~~~~~~~~~~~~~i~~i~g 367 (497)
++|.-||+|+ | .++..++++|. .|+.+|.++..++.+.+.+... ++.. ... .....++.+ ..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~----~~~-~~~~~~i~~-~~ 77 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAAD----GAA-QKALGGIRY-SD 77 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTT----THH-HHHHHHCEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCH----HHH-HHHHcCeEE-eC
Confidence 5788889886 2 35566677788 9999999999888777653221 1100 000 000012332 23
Q ss_pred chhhcccccCCCCCceeEEEeccccccccChhhHHHHHHHHhccccCCcEEeccCce
Q 010913 368 MVEELGESMQIQPHSVDVLVSEWMGYCLLYESMLSSVLFARDQWLKPGGAILPDTAT 424 (497)
Q Consensus 368 d~~~l~~~l~~~~~~fDvIvs~~~~~~l~~~~~l~~vL~~~~r~LkpgG~li~~~~~ 424 (497)
+..+. -...|+|+... -........++..+...++|+.+++-.+.+
T Consensus 78 ~~~~~-------~~~aDlVi~av----~~~~~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 78 DLAQA-------VKDADLVIEAV----PESLDLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp CHHHH-------TTTCSEEEECC----CSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred CHHHH-------hccCCEEEEec----cCcHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 33322 23579998542 122235567888888999999887744433
No 498
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=80.91 E-value=5 Score=38.09 Aligned_cols=82 Identities=18% Similarity=0.119 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecchhhc
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMVEEL 372 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~~~l 372 (497)
..+++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+.. ..++.++.+|+.+.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~------------~~~~~~~~~Dv~~~ 75 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGAN------------GGAIRYEPTDITNE 75 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCS------------SCEEEEEECCTTSH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCC------------CceEEEEeCCCCCH
Confidence 468899999988775 4566777798 8999999988776666666544320 13788999998764
Q ss_pred ccccCC------CCCceeEEEecc
Q 010913 373 GESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 373 ~~~l~~------~~~~fDvIvs~~ 390 (497)
..-..+ ..+.+|++|.+.
T Consensus 76 ~~v~~~~~~~~~~~g~id~lv~nA 99 (281)
T 3svt_A 76 DETARAVDAVTAWHGRLHGVVHCA 99 (281)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 310000 014689999764
No 499
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=80.79 E-value=4.2 Score=38.46 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCC------------HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 010913 296 MKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEAS------------EKMAAVATQIAKDNDFWWDRPQSEGNINNAG 360 (497)
Q Consensus 296 ~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S------------~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~ 360 (497)
..+++||-.|++.|+ ++..+++.|+ +|+++|.+ ...++...+.+...+ .
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~ 74 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---------------S 74 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---------------C
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC---------------C
Confidence 568999999988775 4666777798 89999987 555554444444433 4
Q ss_pred ceEEEecchhhcccccCC------CCCceeEEEecc
Q 010913 361 KMEVVQGMVEELGESMQI------QPHSVDVLVSEW 390 (497)
Q Consensus 361 ~i~~i~gd~~~l~~~l~~------~~~~fDvIvs~~ 390 (497)
++.++.+|+.+...-..+ .-+.+|++|.+.
T Consensus 75 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 75 RIVARQADVRDRESLSAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 789999998764310000 014689999764
No 500
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=80.75 E-value=5.4 Score=36.82 Aligned_cols=81 Identities=20% Similarity=0.211 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCCCCH---hHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCceEEEecch--
Q 010913 295 LMKGAVVMDIGCGTGI---LSLFAAQAGASRVIAVEASEKMAAVATQIAKDNDFWWDRPQSEGNINNAGKMEVVQGMV-- 369 (497)
Q Consensus 295 ~~~~~~VLDvGCGtG~---ls~~la~~G~~~V~gvD~S~~~i~~A~~~~~~~gl~~~~~~~~~~~~~~~~i~~i~gd~-- 369 (497)
..++++||-.|++.|+ ++..+++.|+ +|+.++.++..++.+.+.+...+. .++.++..++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~d~d~ 75 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQ--------------PQPLIIALNLEN 75 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTS--------------CCCEEEECCTTT
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCC--------------CCceEEEecccc
Confidence 3578999999988775 4556667788 899999998887777666665542 3566776665
Q ss_pred hhccc------ccCCCCCceeEEEecc
Q 010913 370 EELGE------SMQIQPHSVDVLVSEW 390 (497)
Q Consensus 370 ~~l~~------~l~~~~~~fDvIvs~~ 390 (497)
.+... .+.-.-+.+|++|.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~g~id~lv~nA 102 (247)
T 3i1j_A 76 ATAQQYRELAARVEHEFGRLDGLLHNA 102 (247)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 22110 0000113689999764
Done!