Query 010914
Match_columns 497
No_of_seqs 153 out of 247
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 16:55:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010914.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010914hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2efla1 a.238.1.4 (A:1-288) Fo 72.2 29 0.0021 29.9 16.3 8 390-397 263-270 (288)
2 d1fxka_ a.2.5.1 (A:) Prefoldin 66.8 12 0.00088 29.5 8.4 32 203-234 70-101 (107)
3 d1seta1 a.2.7.1 (A:1-110) Sery 64.1 26 0.0019 27.4 10.0 34 198-231 28-61 (110)
4 d1fxkc_ a.2.5.1 (C:) Prefoldin 61.6 21 0.0016 28.5 9.2 27 158-184 16-42 (133)
5 d1seta1 a.2.7.1 (A:1-110) Sery 58.8 37 0.0027 26.4 10.8 29 156-185 28-56 (110)
6 d1fxka_ a.2.5.1 (A:) Prefoldin 55.8 42 0.0031 26.1 10.8 22 259-280 77-98 (107)
7 d2azeb1 e.63.1.2 (B:201-301) T 50.3 12 0.00091 29.8 5.6 31 209-239 5-35 (101)
8 d1qvra2 c.37.1.20 (A:149-535) 47.6 30 0.0022 33.1 9.1 23 145-168 180-202 (387)
9 d2efka1 a.238.1.4 (A:10-288) C 42.9 93 0.0068 26.3 16.7 9 390-398 254-262 (279)
10 d1wu9a1 a.245.1.1 (A:191-249) 38.6 18 0.0013 26.3 4.4 26 159-184 10-35 (59)
11 d1qvra2 c.37.1.20 (A:149-535) 38.3 77 0.0056 30.0 10.4 7 275-281 354-360 (387)
12 d2efka1 a.238.1.4 (A:10-288) C 37.5 1.1E+02 0.0082 25.7 15.9 27 159-185 90-116 (279)
13 d2efla1 a.238.1.4 (A:1-288) Fo 33.2 1.3E+02 0.0097 25.3 16.7 23 162-184 102-124 (288)
14 d1nkpa_ a.38.1.1 (A:) Myc prot 32.5 36 0.0026 25.6 5.5 30 201-230 55-84 (88)
15 d1ykhb1 a.252.1.1 (B:2-130) RN 30.3 1.3E+02 0.0095 24.3 9.9 32 192-223 85-116 (129)
16 d1lrza1 a.2.7.4 (A:245-309) Me 30.0 94 0.0069 22.6 9.0 11 222-232 40-50 (65)
17 d2azeb1 e.63.1.2 (B:201-301) T 29.9 42 0.0031 26.5 5.7 16 224-239 6-21 (101)
18 d1ivsa1 a.2.7.3 (A:797-862) Va 25.1 1.1E+02 0.0078 21.6 7.5 22 163-184 3-24 (66)
19 d1fxkc_ a.2.5.1 (C:) Prefoldin 24.5 1.5E+02 0.011 23.0 13.9 29 252-280 100-128 (133)
20 d1nkpb_ a.38.1.1 (B:) Max prot 23.7 40 0.0029 25.0 4.2 30 201-230 50-79 (83)
21 d1bjta_ e.11.1.1 (A:) DNA topo 23.3 62 0.0045 33.7 7.1 17 39-55 318-335 (760)
22 d2fupa1 a.47.5.1 (A:1-130) Hyp 22.0 1.6E+02 0.012 22.6 12.2 59 168-228 10-68 (130)
23 d2ap3a1 a.24.27.1 (A:12-196) H 21.5 1.5E+02 0.011 22.1 16.2 13 162-174 60-72 (185)
No 1
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.24 E-value=29 Score=29.93 Aligned_cols=8 Identities=13% Similarity=-0.002 Sum_probs=3.8
Q ss_pred HHHHHHHh
Q 010914 390 KDFAEFAN 397 (497)
Q Consensus 390 ~q~~e~~~ 397 (497)
.++..|++
T Consensus 263 ~D~~~fi~ 270 (288)
T d2efla1 263 NDSQLVIE 270 (288)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444554
No 2
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=66.81 E-value=12 Score=29.46 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010914 203 IEEEERKLEAAIEETEKQNAEVNAELKELELK 234 (497)
Q Consensus 203 Le~EE~~L~~eL~~LE~e~~~l~~El~~le~e 234 (497)
|++.-+.+..+++.++++...+..++.+++.+
T Consensus 70 l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~ 101 (107)
T d1fxka_ 70 LQEKLETLQLREKTIERQEERVMKKLQEMQVN 101 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555555555555555555555444
No 3
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=64.10 E-value=26 Score=27.37 Aligned_cols=34 Identities=15% Similarity=0.343 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010914 198 KEKLKIEEEERKLEAAIEETEKQNAEVNAELKEL 231 (497)
Q Consensus 198 ~e~~~Le~EE~~L~~eL~~LE~e~~~l~~El~~l 231 (497)
.++.++.++.+++..++++|..++.++..++...
T Consensus 28 d~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~ 61 (110)
T d1seta1 28 EALLALDREVQELKKRLQEVQTERNQVAKRVPKA 61 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566778888888888888888888888877654
No 4
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=61.57 E-value=21 Score=28.51 Aligned_cols=27 Identities=15% Similarity=0.245 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010914 158 LSDKLDKEVDDVTRDIEAYEACLQRLE 184 (497)
Q Consensus 158 Lle~Ld~qle~~~~E~d~Y~~fL~~L~ 184 (497)
-++.|+.+++.++.....|....+.|+
T Consensus 16 ~l~~l~~~i~~l~~~~~e~~~~~~~L~ 42 (133)
T d1fxkc_ 16 QVELIQQQMEAVRATISELEILEKTLS 42 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666666666666665555543
No 5
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=58.79 E-value=37 Score=26.37 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010914 156 RVLSDKLDKEVDDVTRDIEAYEACLQRLEG 185 (497)
Q Consensus 156 d~Lle~Ld~qle~~~~E~d~Y~~fL~~L~~ 185 (497)
+.+++ |+.+...+..+.+..+.--+.+.+
T Consensus 28 d~i~~-ld~~rr~l~~~~e~l~~~rN~~sk 56 (110)
T d1seta1 28 EALLA-LDREVQELKKRLQEVQTERNQVAK 56 (110)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443 566666665555555554444443
No 6
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=55.84 E-value=42 Score=26.06 Aligned_cols=22 Identities=18% Similarity=0.126 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 010914 259 HQEERDAISSKIEVSQAHLELL 280 (497)
Q Consensus 259 ~~ee~~sl~~q~~~~~~qLdkL 280 (497)
+..+...+..++.....+++.+
T Consensus 77 l~~~i~~l~~q~~~l~~~l~~~ 98 (107)
T d1fxka_ 77 LQLREKTIERQEERVMKKLQEM 98 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444443
No 7
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.26 E-value=12 Score=29.78 Aligned_cols=31 Identities=3% Similarity=0.129 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010914 209 KLEAAIEETEKQNAEVNAELKELELKSKRFK 239 (497)
Q Consensus 209 ~L~~eL~~LE~e~~~l~~El~~le~e~~~L~ 239 (497)
.|.+||+.|+.+..+|++.|..++.++..+.
T Consensus 5 ~L~~El~~L~~~E~~LD~li~~~~~~L~~lt 35 (101)
T d2azeb1 5 GLTQDLRQLQESEQQLDHLMNICTTQLRLLS 35 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3555666666666666666666655555554
No 8
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=47.64 E-value=30 Score=33.06 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=14.7
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHH
Q 010914 145 QVEQPLCLECMRVLSDKLDKEVDD 168 (497)
Q Consensus 145 ~IDhPLC~eC~d~Lle~Ld~qle~ 168 (497)
.|+-|-=.+|...| ..+...|+.
T Consensus 180 ~v~ep~~~~~~~il-~~~~~~~e~ 202 (387)
T d1qvra2 180 YVDEPTVEETISIL-RGLKEKYEV 202 (387)
T ss_dssp EECCCCHHHHHHHH-HHHHHHHHH
T ss_pred cCCCCcHHHHHHHH-HHHHHHHHh
Confidence 56777777777664 456666654
No 9
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.86 E-value=93 Score=26.31 Aligned_cols=9 Identities=11% Similarity=0.003 Sum_probs=4.3
Q ss_pred HHHHHHHhc
Q 010914 390 KDFAEFANS 398 (497)
Q Consensus 390 ~q~~e~~~~ 398 (497)
.++..|+..
T Consensus 254 ~D~~~f~~~ 262 (279)
T d2efka1 254 NDSHVLIEL 262 (279)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344555543
No 10
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.60 E-value=18 Score=26.32 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010914 159 SDKLDKEVDDVTRDIEAYEACLQRLE 184 (497)
Q Consensus 159 le~Ld~qle~~~~E~d~Y~~fL~~L~ 184 (497)
+..|+..++.+++|||-|-.-|+.++
T Consensus 10 i~elk~~v~~lEkERdFYF~KLRdIE 35 (59)
T d1wu9a1 10 VNVLKLTVEDLEKERDFYFGKLRNIE 35 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688889999999999999998876
No 11
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=38.30 E-value=77 Score=30.04 Aligned_cols=7 Identities=43% Similarity=0.529 Sum_probs=2.8
Q ss_pred HHHHHHh
Q 010914 275 AHLELLK 281 (497)
Q Consensus 275 ~qLdkL~ 281 (497)
.+++.+.
T Consensus 354 ~el~~l~ 360 (387)
T d1qvra2 354 AEVEALS 360 (387)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444443
No 12
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.46 E-value=1.1e+02 Score=25.72 Aligned_cols=27 Identities=11% Similarity=0.007 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 010914 159 SDKLDKEVDDVTRDIEAYEACLQRLEG 185 (497)
Q Consensus 159 le~Ld~qle~~~~E~d~Y~~fL~~L~~ 185 (497)
++.|..-+.+..+.++.+....+++.+
T Consensus 90 ~~~l~~~~~~~~~~~k~~~~~~~~~~k 116 (279)
T d2efka1 90 CLELTKYSQEMKQERKMHFQEGRRAQQ 116 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444455555555554443
No 13
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.16 E-value=1.3e+02 Score=25.29 Aligned_cols=23 Identities=9% Similarity=0.114 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 010914 162 LDKEVDDVTRDIEAYEACLQRLE 184 (497)
Q Consensus 162 Ld~qle~~~~E~d~Y~~fL~~L~ 184 (497)
|..-..+.++.++.+.....++.
T Consensus 102 l~~~~~~~~~~~K~~~~~~~k~~ 124 (288)
T d2efla1 102 LARYVQELKQERKSNFHDGRKAQ 124 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444444443
No 14
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.53 E-value=36 Score=25.56 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010914 201 LKIEEEERKLEAAIEETEKQNAEVNAELKE 230 (497)
Q Consensus 201 ~~Le~EE~~L~~eL~~LE~e~~~l~~El~~ 230 (497)
..|+++...+..+++.+.++.+.+.+++..
T Consensus 55 ~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 55 LSVQAEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555555554443
No 15
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.27 E-value=1.3e+02 Score=24.28 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=15.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010914 192 SEADFLKEKLKIEEEERKLEAAIEETEKQNAE 223 (497)
Q Consensus 192 ~ee~l~~e~~~Le~EE~~L~~eL~~LE~e~~~ 223 (497)
++++-.+.+.+|++|-....+++++.-++.++
T Consensus 85 see~Q~~~i~~Le~E~~~~~~el~~~v~e~e~ 116 (129)
T d1ykhb1 85 SAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEK 116 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555555555555544444443333
No 16
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=30.03 E-value=94 Score=22.57 Aligned_cols=11 Identities=18% Similarity=0.296 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 010914 222 AEVNAELKELE 232 (497)
Q Consensus 222 ~~l~~El~~le 232 (497)
.++.+++...+
T Consensus 40 ~el~~Q~~s~~ 50 (65)
T d1lrza1 40 DNLQQQLDANE 50 (65)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 17
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.92 E-value=42 Score=26.49 Aligned_cols=16 Identities=13% Similarity=0.457 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 010914 224 VNAELKELELKSKRFK 239 (497)
Q Consensus 224 l~~El~~le~e~~~L~ 239 (497)
|.+|++.|+.+..+|+
T Consensus 6 L~~El~~L~~~E~~LD 21 (101)
T d2azeb1 6 LTQDLRQLQESEQQLD 21 (101)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444444
No 18
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=25.08 E-value=1.1e+02 Score=21.57 Aligned_cols=22 Identities=9% Similarity=0.074 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 010914 163 DKEVDDVTRDIEAYEACLQRLE 184 (497)
Q Consensus 163 d~qle~~~~E~d~Y~~fL~~L~ 184 (497)
+.+...++++.+.+...+.+++
T Consensus 3 ~~E~~RL~K~l~kl~~~i~~~~ 24 (66)
T d1ivsa1 3 EEWRRRQEKRLKELLALAERSQ 24 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555554444
No 19
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=24.50 E-value=1.5e+02 Score=23.05 Aligned_cols=29 Identities=21% Similarity=0.124 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010914 252 FQFQLIAHQEERDAISSKIEVSQAHLELL 280 (497)
Q Consensus 252 ~q~ql~~~~ee~~sl~~q~~~~~~qLdkL 280 (497)
++..+..+.++...+..++......++++
T Consensus 100 l~~~~~~l~~~~~~~~~~i~~l~~~~~~l 128 (133)
T d1fxkc_ 100 LESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444445555555555555555444
No 20
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.66 E-value=40 Score=24.99 Aligned_cols=30 Identities=13% Similarity=0.318 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010914 201 LKIEEEERKLEAAIEETEKQNAEVNAELKE 230 (497)
Q Consensus 201 ~~Le~EE~~L~~eL~~LE~e~~~l~~El~~ 230 (497)
..|..+...+..+++.+.++.+.+..++..
T Consensus 50 ~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 79 (83)
T d1nkpb_ 50 QYMRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666666666655555543
No 21
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment (residues 410-1202) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.29 E-value=62 Score=33.67 Aligned_cols=17 Identities=24% Similarity=0.399 Sum_probs=11.6
Q ss_pred cccccccc-cccccCccc
Q 010914 39 HASNSVLG-STRMDNSFV 55 (497)
Q Consensus 39 ~~~~~~~~-~~~~d~s~~ 55 (497)
||-+|+.+ --+|=+.|+
T Consensus 318 HGe~sl~~aiv~maQ~f~ 335 (760)
T d1bjta_ 318 HGEQSLAQTIIGLAQNFV 335 (760)
T ss_dssp SSSCCHHHHHHHHHCCST
T ss_pred CCCcchhHHHHHHHhhhh
Confidence 77777766 456777773
No 22
>d2fupa1 a.47.5.1 (A:1-130) Hypothetical protein PA3352 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.00 E-value=1.6e+02 Score=22.63 Aligned_cols=59 Identities=20% Similarity=0.217 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010914 168 DVTRDIEAYEACLQRLEGEARDVLSEADFLKEKLKIEEEERKLEAAIEETEKQNAEVNAEL 228 (497)
Q Consensus 168 ~~~~E~d~Y~~fL~~L~~~~~~~~~ee~l~~e~~~Le~EE~~L~~eL~~LE~e~~~l~~El 228 (497)
....|+..|..++.-++.+..- +..-| .+++..+-.++..+..++..++..+.++-.++
T Consensus 10 ~L~~e~~~~~~L~~LL~~e~~a-L~~~d-~~~Le~l~~~k~~ll~~l~~~~~~R~~~l~~~ 68 (130)
T d2fupa1 10 LFAEDIGHANQLLQLVDEEFQA-LERRE-LPVLQQLLGAKQPLMQQLERNGRARAEILREA 68 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3455777888888877755310 00001 12556677778888888888888887765543
No 23
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=21.53 E-value=1.5e+02 Score=22.07 Aligned_cols=13 Identities=38% Similarity=0.527 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHHH
Q 010914 162 LDKEVDDVTRDIE 174 (497)
Q Consensus 162 Ld~qle~~~~E~d 174 (497)
+..+++.......
T Consensus 60 ~~~~~~~~~~~~~ 72 (185)
T d2ap3a1 60 LIKNADDRLKEFE 72 (185)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444333333
Done!