Query 010917
Match_columns 497
No_of_seqs 485 out of 4184
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 16:59:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010917.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010917hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 3.2E-59 1.1E-63 472.8 46.0 396 58-478 7-407 (415)
2 3fg2_P Putative rubredoxin red 100.0 6E-59 2.1E-63 469.0 46.6 393 60-478 1-396 (404)
3 3ef6_A Toluene 1,2-dioxygenase 100.0 8.6E-59 2.9E-63 468.4 43.3 391 60-478 2-395 (410)
4 1q1r_A Putidaredoxin reductase 100.0 1.3E-54 4.4E-59 440.3 45.2 403 59-485 3-413 (431)
5 3klj_A NAD(FAD)-dependent dehy 100.0 6E-56 2E-60 442.4 32.8 374 58-486 7-384 (385)
6 2gqw_A Ferredoxin reductase; f 100.0 1.1E-54 3.6E-59 438.0 41.8 392 59-484 6-403 (408)
7 1m6i_A Programmed cell death p 100.0 7.7E-52 2.6E-56 426.6 32.6 406 57-470 8-479 (493)
8 4eqs_A Coenzyme A disulfide re 100.0 6E-50 2E-54 406.3 33.1 393 61-483 1-425 (437)
9 2bc0_A NADH oxidase; flavoprot 100.0 1.3E-49 4.4E-54 410.4 31.2 425 40-490 16-484 (490)
10 2cdu_A NADPH oxidase; flavoenz 100.0 1.4E-49 4.9E-54 406.5 28.8 403 61-488 1-437 (452)
11 1xhc_A NADH oxidase /nitrite r 100.0 9.5E-49 3.2E-53 388.6 33.8 354 60-463 8-362 (367)
12 3oc4_A Oxidoreductase, pyridin 100.0 1.8E-48 6.3E-53 398.1 34.6 396 61-482 3-426 (452)
13 3iwa_A FAD-dependent pyridine 100.0 1.1E-48 3.9E-53 402.0 32.6 411 60-487 3-450 (472)
14 3kd9_A Coenzyme A disulfide re 100.0 7.5E-48 2.6E-52 393.4 31.8 398 60-484 3-430 (449)
15 1nhp_A NADH peroxidase; oxidor 100.0 4.2E-48 1.4E-52 395.1 27.6 404 61-490 1-438 (447)
16 3cgb_A Pyridine nucleotide-dis 100.0 2.3E-47 7.9E-52 392.6 32.5 403 60-488 36-473 (480)
17 2v3a_A Rubredoxin reductase; a 100.0 1.1E-46 3.6E-51 377.2 36.3 367 60-461 4-377 (384)
18 3ntd_A FAD-dependent pyridine 100.0 1.5E-46 5.1E-51 395.3 33.6 386 61-470 2-437 (565)
19 3ics_A Coenzyme A-disulfide re 100.0 3.1E-45 1.1E-49 386.5 35.6 389 57-470 33-453 (588)
20 1mo9_A ORF3; nucleotide bindin 100.0 4.1E-43 1.4E-47 364.4 39.2 403 57-493 40-519 (523)
21 2qae_A Lipoamide, dihydrolipoy 100.0 3.1E-43 1.1E-47 361.2 35.8 401 60-493 2-463 (468)
22 1zmd_A Dihydrolipoyl dehydroge 100.0 4.6E-43 1.6E-47 360.5 34.9 401 60-491 6-466 (474)
23 1zk7_A HGII, reductase, mercur 100.0 6.1E-43 2.1E-47 358.9 34.9 397 59-492 3-456 (467)
24 1xdi_A RV3303C-LPDA; reductase 100.0 3.7E-43 1.3E-47 363.2 33.2 400 60-493 2-466 (499)
25 2hqm_A GR, grase, glutathione 100.0 1.3E-42 4.5E-47 357.1 34.7 398 59-489 10-472 (479)
26 1v59_A Dihydrolipoamide dehydr 100.0 1.4E-43 4.8E-48 364.9 27.4 401 60-492 5-472 (478)
27 1dxl_A Dihydrolipoamide dehydr 100.0 6.9E-43 2.3E-47 359.1 32.2 402 58-493 4-465 (470)
28 2a8x_A Dihydrolipoyl dehydroge 100.0 3.4E-43 1.2E-47 360.5 29.7 399 60-492 3-458 (464)
29 1ebd_A E3BD, dihydrolipoamide 100.0 7.1E-43 2.4E-47 357.2 31.8 396 60-491 3-454 (455)
30 1ojt_A Surface protein; redox- 100.0 1.4E-43 4.8E-48 364.8 26.7 399 60-492 6-471 (482)
31 3l8k_A Dihydrolipoyl dehydroge 100.0 1.3E-42 4.5E-47 356.1 28.8 399 60-491 4-457 (466)
32 1ges_A Glutathione reductase; 100.0 4.1E-42 1.4E-46 350.6 30.8 391 60-487 4-449 (450)
33 1onf_A GR, grase, glutathione 100.0 2E-42 6.7E-47 357.5 28.7 401 60-488 2-496 (500)
34 3urh_A Dihydrolipoyl dehydroge 100.0 1.2E-42 4.1E-47 358.8 26.8 405 57-494 22-487 (491)
35 2wpf_A Trypanothione reductase 100.0 4.2E-42 1.4E-46 354.2 30.8 317 139-488 117-475 (495)
36 2eq6_A Pyruvate dehydrogenase 100.0 7.1E-42 2.4E-46 350.3 32.0 396 60-493 6-456 (464)
37 1fec_A Trypanothione reductase 100.0 6.7E-42 2.3E-46 352.4 30.2 317 139-488 113-471 (490)
38 3lad_A Dihydrolipoamide dehydr 100.0 3.3E-41 1.1E-45 347.0 33.6 402 59-494 2-467 (476)
39 2r9z_A Glutathione amide reduc 100.0 1.6E-42 5.4E-47 354.8 23.7 392 59-488 3-448 (463)
40 3dk9_A Grase, GR, glutathione 100.0 5.1E-42 1.7E-46 353.1 26.9 395 59-486 19-476 (478)
41 1lvl_A Dihydrolipoamide dehydr 100.0 3.3E-41 1.1E-45 344.7 31.2 395 60-494 5-454 (458)
42 2yqu_A 2-oxoglutarate dehydrog 100.0 3.7E-41 1.3E-45 344.5 31.4 397 61-493 2-450 (455)
43 4dna_A Probable glutathione re 100.0 1.9E-41 6.5E-46 347.3 28.0 396 59-490 4-452 (463)
44 3dgz_A Thioredoxin reductase 2 100.0 2.4E-40 8.2E-45 341.2 34.4 398 59-489 5-476 (488)
45 3ic9_A Dihydrolipoamide dehydr 100.0 2.6E-41 8.8E-46 348.2 26.5 390 60-493 8-468 (492)
46 3dgh_A TRXR-1, thioredoxin red 100.0 1.6E-40 5.4E-45 342.3 31.1 398 58-488 7-475 (483)
47 4b1b_A TRXR, thioredoxin reduc 100.0 3.9E-41 1.3E-45 347.1 26.4 400 60-492 42-525 (542)
48 3qfa_A Thioredoxin reductase 1 100.0 1.8E-40 6.1E-45 344.1 30.7 400 58-489 30-504 (519)
49 3o0h_A Glutathione reductase; 100.0 7.6E-41 2.6E-45 344.6 26.6 395 59-489 25-471 (484)
50 2x8g_A Thioredoxin glutathione 100.0 1.7E-39 5.7E-44 343.2 30.4 395 58-490 105-584 (598)
51 4g6h_A Rotenone-insensitive NA 100.0 2.7E-40 9.1E-45 340.1 20.3 298 57-385 39-398 (502)
52 2vdc_G Glutamate synthase [NAD 100.0 6.4E-40 2.2E-44 333.0 14.8 330 12-385 60-441 (456)
53 4gcm_A TRXR, thioredoxin reduc 100.0 6.3E-38 2.2E-42 304.8 25.5 293 57-384 3-302 (312)
54 2zbw_A Thioredoxin reductase; 100.0 4.9E-38 1.7E-42 308.7 22.5 313 58-401 3-329 (335)
55 3ab1_A Ferredoxin--NADP reduct 100.0 3.9E-38 1.3E-42 312.6 21.8 316 58-402 12-342 (360)
56 1gte_A Dihydropyrimidine dehyd 100.0 2.9E-38 9.8E-43 350.5 19.3 348 12-399 117-526 (1025)
57 3lzw_A Ferredoxin--NADP reduct 100.0 1.6E-37 5.4E-42 304.4 19.0 292 60-385 7-312 (332)
58 3f8d_A Thioredoxin reductase ( 100.0 9.8E-37 3.4E-41 297.5 23.0 289 60-385 15-314 (323)
59 4a5l_A Thioredoxin reductase; 100.0 7.1E-37 2.4E-41 297.6 20.4 298 59-384 3-308 (314)
60 3cty_A Thioredoxin reductase; 100.0 2.8E-36 9.6E-41 294.1 24.4 288 59-385 15-313 (319)
61 3fbs_A Oxidoreductase; structu 100.0 1.4E-36 4.6E-41 293.0 21.6 278 60-385 2-289 (297)
62 2q7v_A Thioredoxin reductase; 100.0 6.6E-36 2.3E-40 292.3 25.8 287 59-385 7-309 (325)
63 1fl2_A Alkyl hydroperoxide red 100.0 2.4E-36 8.3E-41 293.3 22.2 285 61-385 2-302 (310)
64 3r9u_A Thioredoxin reductase; 100.0 9.3E-36 3.2E-40 289.6 24.5 289 59-385 3-309 (315)
65 2q0l_A TRXR, thioredoxin reduc 100.0 8.9E-36 3E-40 289.4 24.2 288 61-385 2-306 (311)
66 3itj_A Thioredoxin reductase 1 100.0 2.1E-36 7.2E-41 297.2 19.8 295 57-385 19-332 (338)
67 1trb_A Thioredoxin reductase; 100.0 3.4E-36 1.2E-40 293.6 21.1 291 60-385 5-311 (320)
68 4fk1_A Putative thioredoxin re 100.0 2E-36 6.7E-41 293.1 19.1 285 57-384 3-296 (304)
69 3h8l_A NADH oxidase; membrane 100.0 1.7E-35 6E-40 298.5 25.9 288 61-385 2-333 (409)
70 3vrd_B FCCB subunit, flavocyto 100.0 1E-35 3.5E-40 299.5 23.6 297 60-385 2-321 (401)
71 3hyw_A Sulfide-quinone reducta 100.0 3E-36 1E-40 305.5 19.6 302 60-385 2-330 (430)
72 3sx6_A Sulfide-quinone reducta 100.0 1.1E-35 3.8E-40 302.2 21.5 304 60-385 4-341 (437)
73 1vdc_A NTR, NADPH dependent th 100.0 6.7E-35 2.3E-39 286.1 21.5 294 59-385 7-320 (333)
74 2a87_A TRXR, TR, thioredoxin r 100.0 1.3E-34 4.4E-39 284.3 20.7 289 57-384 11-312 (335)
75 1hyu_A AHPF, alkyl hydroperoxi 100.0 4.3E-34 1.5E-38 296.1 25.5 289 58-385 210-513 (521)
76 4a9w_A Monooxygenase; baeyer-v 100.0 8.8E-35 3E-39 287.7 18.7 300 60-385 3-349 (357)
77 3d1c_A Flavin-containing putat 100.0 8.1E-34 2.8E-38 282.4 22.8 307 60-387 4-338 (369)
78 3h28_A Sulfide-quinone reducta 100.0 5.1E-34 1.7E-38 289.5 17.8 298 60-385 2-330 (430)
79 1o94_A Tmadh, trimethylamine d 100.0 4.4E-34 1.5E-38 306.9 13.8 318 38-419 364-721 (729)
80 1cjc_A Protein (adrenodoxin re 100.0 1.4E-33 4.9E-38 287.1 12.1 291 59-385 5-392 (460)
81 3k30_A Histamine dehydrogenase 100.0 2.3E-33 8E-38 300.2 10.4 295 38-386 366-673 (690)
82 2xve_A Flavin-containing monoo 100.0 1.2E-31 4E-36 274.0 22.0 288 61-387 3-340 (464)
83 1lqt_A FPRA; NADP+ derivative, 100.0 1.3E-32 4.6E-37 279.6 10.9 286 60-385 3-384 (456)
84 2gag_A Heterotetrameric sarcos 100.0 2.4E-31 8.2E-36 293.1 21.6 280 60-385 128-441 (965)
85 1ps9_A 2,4-dienoyl-COA reducta 100.0 3.5E-31 1.2E-35 282.7 18.2 279 38-383 353-671 (671)
86 1y56_A Hypothetical protein PH 100.0 1.5E-31 5E-36 275.4 14.1 253 60-385 108-374 (493)
87 3s5w_A L-ornithine 5-monooxyge 100.0 7.5E-31 2.6E-35 269.0 18.8 314 59-383 29-444 (463)
88 2gv8_A Monooxygenase; FMO, FAD 100.0 3.7E-29 1.3E-33 255.0 19.0 288 59-387 5-361 (447)
89 3gwf_A Cyclohexanone monooxyge 100.0 7.6E-28 2.6E-32 249.4 17.7 298 60-384 8-453 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 2.1E-26 7.2E-31 238.9 14.7 303 58-384 7-462 (545)
91 4ap3_A Steroid monooxygenase; 99.9 2.7E-25 9.2E-30 230.7 20.1 303 58-384 19-467 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 7.4E-25 2.5E-29 228.2 18.8 300 59-385 15-463 (542)
93 2ywl_A Thioredoxin reductase r 99.9 7.2E-22 2.5E-26 175.4 17.5 153 218-385 3-168 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1.1E-19 3.9E-24 186.9 23.9 293 58-352 37-457 (501)
95 2e5v_A L-aspartate oxidase; ar 99.7 5.9E-20 2E-24 187.6 -7.2 223 138-385 128-370 (472)
96 2cul_A Glucose-inhibited divis 99.6 6E-15 2.1E-19 136.1 17.3 155 217-385 4-229 (232)
97 3fpz_A Thiazole biosynthetic e 99.6 6.1E-19 2.1E-23 171.8 -10.5 251 59-384 64-321 (326)
98 2gqf_A Hypothetical protein HI 99.5 6.9E-16 2.3E-20 154.0 -1.2 121 60-184 4-169 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.2 1.5E-12 5.1E-17 131.6 1.9 95 257-354 203-307 (431)
100 1rp0_A ARA6, thiazole biosynth 99.2 4.9E-11 1.7E-15 113.2 11.3 164 217-385 40-272 (284)
101 2ywl_A Thioredoxin reductase r 99.2 5.3E-11 1.8E-15 104.9 8.7 107 61-184 2-111 (180)
102 2zxi_A TRNA uridine 5-carboxym 99.1 6.7E-10 2.3E-14 114.8 14.6 160 59-246 26-219 (637)
103 2bry_A NEDD9 interacting prote 99.1 1.5E-11 5E-16 126.3 1.2 169 13-184 23-231 (497)
104 1kf6_A Fumarate reductase flav 99.1 3.1E-10 1E-14 118.9 10.5 36 60-96 5-40 (602)
105 3ces_A MNMG, tRNA uridine 5-ca 99.0 5.2E-10 1.8E-14 116.0 7.4 160 59-246 27-220 (651)
106 2bry_A NEDD9 interacting prote 99.0 2.4E-10 8.1E-15 117.3 4.4 147 171-318 37-232 (497)
107 4dgk_A Phytoene dehydrogenase; 99.0 8.2E-10 2.8E-14 113.7 8.4 58 257-315 220-277 (501)
108 3dme_A Conserved exported prot 99.0 1.5E-08 5E-13 99.7 17.1 68 257-326 149-219 (369)
109 3v76_A Flavoprotein; structura 99.0 5.8E-10 2E-14 111.5 6.5 124 56-183 23-187 (417)
110 2cul_A Glucose-inhibited divis 98.9 1.2E-09 3.9E-14 100.5 6.9 116 60-184 3-126 (232)
111 3pl8_A Pyranose 2-oxidase; sub 98.9 3.7E-11 1.3E-15 126.2 -4.3 59 269-327 271-335 (623)
112 3alj_A 2-methyl-3-hydroxypyrid 98.9 1.8E-09 6.1E-14 107.0 6.5 121 59-184 10-161 (379)
113 3nlc_A Uncharacterized protein 98.9 6.1E-09 2.1E-13 107.1 10.4 124 58-184 105-278 (549)
114 3pvc_A TRNA 5-methylaminomethy 98.9 8.9E-08 3.1E-12 102.2 19.4 66 258-326 412-478 (689)
115 1d4d_A Flavocytochrome C fumar 98.8 6.3E-08 2.2E-12 101.0 17.4 61 257-317 254-318 (572)
116 2i0z_A NAD(FAD)-utilizing dehy 98.8 3.8E-09 1.3E-13 107.0 7.5 123 58-183 24-191 (447)
117 3nix_A Flavoprotein/dehydrogen 98.8 2.4E-08 8.2E-13 100.2 13.3 67 259-327 107-175 (421)
118 2e4g_A Tryptophan halogenase; 98.8 1.6E-08 5.5E-13 105.1 11.5 59 258-317 194-253 (550)
119 3ps9_A TRNA 5-methylaminomethy 98.8 1.2E-07 4E-12 101.2 18.2 57 258-316 417-473 (676)
120 3nlc_A Uncharacterized protein 98.8 3.7E-08 1.3E-12 101.3 12.5 111 216-327 107-290 (549)
121 2gag_B Heterotetrameric sarcos 98.8 1.9E-07 6.5E-12 93.0 16.9 65 258-325 174-238 (405)
122 1yvv_A Amine oxidase, flavin-c 98.7 2.6E-08 8.9E-13 96.6 10.2 119 60-182 2-161 (336)
123 4a9w_A Monooxygenase; baeyer-v 98.7 1.3E-07 4.3E-12 92.4 14.5 97 217-315 4-131 (357)
124 2vou_A 2,6-dihydroxypyridine h 98.7 4.6E-08 1.6E-12 97.4 11.4 123 58-183 3-153 (397)
125 2x3n_A Probable FAD-dependent 98.7 9.8E-09 3.4E-13 102.3 6.5 122 60-184 6-167 (399)
126 3axb_A Putative oxidoreductase 98.7 2.2E-08 7.6E-13 101.4 9.2 66 258-325 181-262 (448)
127 1s3e_A Amine oxidase [flavin-c 98.7 8.4E-09 2.9E-13 106.6 6.1 48 266-315 220-267 (520)
128 3fmw_A Oxygenase; mithramycin, 98.7 1.5E-08 5E-13 105.5 7.3 122 59-183 48-207 (570)
129 3cp8_A TRNA uridine 5-carboxym 98.7 1E-08 3.4E-13 106.4 5.3 161 58-245 19-213 (641)
130 3i3l_A Alkylhalidase CMLS; fla 98.7 3.6E-08 1.2E-12 102.9 9.1 123 58-183 21-188 (591)
131 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 4.6E-08 1.6E-12 95.3 9.5 118 61-181 2-163 (342)
132 3dje_A Fructosyl amine: oxygen 98.7 7.6E-07 2.6E-11 89.7 18.7 58 258-316 161-221 (438)
133 1rp0_A ARA6, thiazole biosynth 98.7 2.4E-08 8.2E-13 94.6 6.9 122 59-184 38-192 (284)
134 3cgv_A Geranylgeranyl reductas 98.7 3.3E-08 1.1E-12 98.3 7.9 121 60-183 4-162 (397)
135 2gf3_A MSOX, monomeric sarcosi 98.7 2.1E-07 7.1E-12 92.2 13.5 79 240-325 135-213 (389)
136 1ryi_A Glycine oxidase; flavop 98.6 2.8E-08 9.6E-13 98.3 6.8 37 57-96 14-50 (382)
137 3lzw_A Ferredoxin--NADP reduct 98.6 1.3E-07 4.5E-12 91.4 11.4 100 217-318 8-128 (332)
138 2xdo_A TETX2 protein; tetracyc 98.6 2E-07 7E-12 92.7 12.8 123 59-184 25-183 (398)
139 1y56_B Sarcosine oxidase; dehy 98.6 1.9E-08 6.6E-13 99.5 4.8 46 137-183 157-205 (382)
140 3ihg_A RDME; flavoenzyme, anth 98.6 5.4E-08 1.9E-12 100.9 8.3 38 58-98 3-40 (535)
141 2qa1_A PGAE, polyketide oxygen 98.6 3.2E-08 1.1E-12 101.5 6.0 123 57-183 8-165 (500)
142 3oz2_A Digeranylgeranylglycero 98.6 1.8E-08 6E-13 100.0 3.7 36 60-98 4-39 (397)
143 2yqu_A 2-oxoglutarate dehydrog 98.6 5.8E-08 2E-12 98.5 7.6 98 60-185 167-266 (455)
144 3e1t_A Halogenase; flavoprotei 98.6 4.7E-08 1.6E-12 100.7 6.9 123 59-184 6-173 (512)
145 3nrn_A Uncharacterized protein 98.6 8.1E-08 2.8E-12 96.4 8.6 56 257-316 188-243 (421)
146 1y0p_A Fumarate reductase flav 98.6 7.1E-08 2.4E-12 100.7 8.1 37 59-98 125-161 (571)
147 3rp8_A Flavoprotein monooxygen 98.6 3.7E-08 1.3E-12 98.4 5.4 125 57-184 20-182 (407)
148 3itj_A Thioredoxin reductase 1 98.6 2.5E-07 8.6E-12 89.6 10.9 102 215-319 21-145 (338)
149 3klj_A NAD(FAD)-dependent dehy 98.6 1.1E-07 3.7E-12 94.1 8.3 102 215-320 8-120 (385)
150 1qo8_A Flavocytochrome C3 fuma 98.6 5.8E-08 2E-12 101.3 6.5 37 59-98 120-156 (566)
151 3v76_A Flavoprotein; structura 98.5 3.4E-07 1.2E-11 91.4 11.7 99 216-317 27-188 (417)
152 2qa2_A CABE, polyketide oxygen 98.5 4E-08 1.4E-12 100.7 5.0 122 58-183 10-166 (499)
153 2gmh_A Electron transfer flavo 98.5 1.9E-07 6.5E-12 97.5 10.1 37 59-98 34-76 (584)
154 3ab1_A Ferredoxin--NADP reduct 98.5 6.6E-07 2.3E-11 87.7 13.5 99 216-315 14-130 (360)
155 3sx6_A Sulfide-quinone reducta 98.5 1.1E-07 3.8E-12 95.9 7.9 101 217-322 5-118 (437)
156 3atr_A Conserved archaeal prot 98.5 2.1E-08 7.2E-13 101.7 2.5 122 60-184 6-163 (453)
157 3nyc_A D-arginine dehydrogenas 98.5 9.8E-08 3.4E-12 94.2 7.2 64 258-325 154-217 (381)
158 3alj_A 2-methyl-3-hydroxypyrid 98.5 6.6E-07 2.3E-11 88.3 12.8 97 216-317 11-161 (379)
159 2zbw_A Thioredoxin reductase; 98.5 5.9E-07 2E-11 87.0 12.2 97 217-315 6-120 (335)
160 3f8d_A Thioredoxin reductase ( 98.5 5.2E-07 1.8E-11 86.6 11.8 100 217-319 16-128 (323)
161 3gwf_A Cyclohexanone monooxyge 98.5 5.8E-07 2E-11 92.9 12.6 102 217-318 9-151 (540)
162 4ap3_A Steroid monooxygenase; 98.5 4.9E-07 1.7E-11 93.6 12.0 103 216-318 21-163 (549)
163 2gqw_A Ferredoxin reductase; f 98.5 2.2E-07 7.5E-12 92.8 8.9 96 60-184 145-240 (408)
164 1fl2_A Alkyl hydroperoxide red 98.5 6.4E-07 2.2E-11 85.7 11.8 101 218-318 3-117 (310)
165 3fbs_A Oxidoreductase; structu 98.5 5.7E-07 2E-11 85.3 11.2 100 217-319 3-115 (297)
166 1k0i_A P-hydroxybenzoate hydro 98.5 1.6E-07 5.3E-12 93.4 7.5 122 60-184 2-164 (394)
167 2uzz_A N-methyl-L-tryptophan o 98.5 2.1E-07 7.3E-12 91.5 8.3 35 60-97 2-36 (372)
168 2v3a_A Rubredoxin reductase; a 98.5 2.7E-07 9.4E-12 91.3 8.4 98 60-184 145-244 (384)
169 2gqf_A Hypothetical protein HI 98.5 1.3E-06 4.4E-11 86.8 13.0 99 217-317 5-169 (401)
170 3hyw_A Sulfide-quinone reducta 98.5 2.5E-07 8.7E-12 93.0 7.9 96 217-317 3-110 (430)
171 1ges_A Glutathione reductase; 98.4 2.8E-07 9.5E-12 93.3 8.0 98 60-185 167-267 (450)
172 2r9z_A Glutathione amide reduc 98.4 2.8E-07 9.6E-12 93.6 8.0 98 60-185 166-266 (463)
173 3ka7_A Oxidoreductase; structu 98.4 3.8E-07 1.3E-11 91.5 8.8 57 258-316 196-252 (425)
174 4eqs_A Coenzyme A disulfide re 98.4 5.1E-07 1.8E-11 90.9 9.6 95 60-184 147-241 (437)
175 1xhc_A NADH oxidase /nitrite r 98.4 3.1E-07 1.1E-11 90.3 7.8 92 61-184 144-235 (367)
176 1qo8_A Flavocytochrome C3 fuma 98.4 8.6E-07 2.9E-11 92.4 11.5 141 177-317 78-313 (566)
177 1lvl_A Dihydrolipoamide dehydr 98.4 2E-07 6.9E-12 94.5 6.5 97 59-185 170-270 (458)
178 2q0l_A TRXR, thioredoxin reduc 98.4 1.1E-06 3.8E-11 84.1 11.3 99 218-319 3-117 (311)
179 3vrd_B FCCB subunit, flavocyto 98.4 3.4E-07 1.2E-11 91.2 7.9 101 216-321 2-113 (401)
180 2eq6_A Pyruvate dehydrogenase 98.4 3E-07 1E-11 93.5 7.6 98 60-185 169-273 (464)
181 2q7v_A Thioredoxin reductase; 98.4 1.2E-06 4.1E-11 84.5 11.5 101 217-319 9-126 (325)
182 2i0z_A NAD(FAD)-utilizing dehy 98.4 1.7E-06 6E-11 87.3 13.0 99 217-316 27-191 (447)
183 3d1c_A Flavin-containing putat 98.4 2E-06 6.8E-11 84.4 13.0 97 217-317 5-144 (369)
184 3uox_A Otemo; baeyer-villiger 98.4 7.8E-07 2.7E-11 92.0 10.3 102 217-318 10-151 (545)
185 2xve_A Flavin-containing monoo 98.4 1.6E-06 5.3E-11 88.1 12.4 103 217-319 3-171 (464)
186 3lxd_A FAD-dependent pyridine 98.4 7.1E-07 2.4E-11 89.3 9.7 98 60-184 152-252 (415)
187 4hb9_A Similarities with proba 98.4 3.3E-07 1.1E-11 91.3 7.3 35 61-98 2-36 (412)
188 4gde_A UDP-galactopyranose mut 98.4 8.8E-08 3E-12 98.7 3.0 41 140-180 233-273 (513)
189 1nhp_A NADH peroxidase; oxidor 98.4 4.2E-07 1.4E-11 91.9 8.0 98 59-184 148-247 (447)
190 1vdc_A NTR, NADPH dependent th 98.4 1.1E-06 3.9E-11 84.9 10.6 99 217-319 9-127 (333)
191 3oz2_A Digeranylgeranylglycero 98.4 2.6E-06 8.9E-11 84.2 13.4 97 218-315 6-161 (397)
192 1onf_A GR, grase, glutathione 98.4 6.7E-07 2.3E-11 91.8 9.2 98 60-185 176-277 (500)
193 3h8l_A NADH oxidase; membrane 98.4 2E-07 6.8E-12 93.2 5.1 98 217-319 2-116 (409)
194 4fk1_A Putative thioredoxin re 98.4 1.8E-06 6.3E-11 82.4 11.6 100 218-319 8-120 (304)
195 2oln_A NIKD protein; flavoprot 98.4 1.1E-06 3.8E-11 87.3 10.2 35 60-97 4-38 (397)
196 2hqm_A GR, grase, glutathione 98.4 5.8E-07 2E-11 91.7 8.3 99 59-185 184-287 (479)
197 3kkj_A Amine oxidase, flavin-c 98.4 2.8E-07 9.4E-12 86.2 5.5 36 60-98 2-37 (336)
198 3fg2_P Putative rubredoxin red 98.4 7.5E-07 2.6E-11 88.8 8.9 99 216-319 1-113 (404)
199 1ebd_A E3BD, dihydrolipoamide 98.4 3.7E-07 1.3E-11 92.6 6.6 99 59-185 169-272 (455)
200 4at0_A 3-ketosteroid-delta4-5a 98.3 7.2E-07 2.5E-11 91.8 8.5 37 59-98 40-76 (510)
201 2x3n_A Probable FAD-dependent 98.3 2.2E-06 7.6E-11 85.1 11.8 100 217-317 7-167 (399)
202 3ef6_A Toluene 1,2-dioxygenase 98.3 1.6E-06 5.5E-11 86.5 10.7 99 217-319 3-114 (410)
203 1q1r_A Putidaredoxin reductase 98.3 1.3E-06 4.4E-11 87.9 10.0 102 216-321 4-119 (431)
204 3ics_A Coenzyme A-disulfide re 98.3 7.1E-07 2.4E-11 93.6 8.3 97 60-184 187-283 (588)
205 3h28_A Sulfide-quinone reducta 98.3 2.7E-07 9.3E-12 92.8 4.9 98 217-319 3-112 (430)
206 2wpf_A Trypanothione reductase 98.3 8E-07 2.7E-11 91.0 8.3 98 60-185 191-294 (495)
207 1hyu_A AHPF, alkyl hydroperoxi 98.3 2.7E-06 9.4E-11 87.6 12.2 103 216-318 212-328 (521)
208 1fec_A Trypanothione reductase 98.3 8.6E-07 2.9E-11 90.7 8.3 98 60-185 187-290 (490)
209 3c96_A Flavin-containing monoo 98.3 2.6E-07 8.9E-12 92.3 4.3 36 59-97 3-39 (410)
210 1y0p_A Fumarate reductase flav 98.3 3.9E-06 1.3E-10 87.5 13.3 101 216-316 126-317 (571)
211 1trb_A Thioredoxin reductase; 98.3 2.8E-06 9.4E-11 81.6 11.2 99 217-319 6-119 (320)
212 1mo9_A ORF3; nucleotide bindin 98.3 8.9E-07 3E-11 91.3 8.0 97 61-185 215-318 (523)
213 2qcu_A Aerobic glycerol-3-phos 98.3 1.4E-06 4.7E-11 89.4 9.3 34 60-96 3-36 (501)
214 1ojt_A Surface protein; redox- 98.3 5.4E-07 1.9E-11 92.0 6.2 98 60-185 185-288 (482)
215 1chu_A Protein (L-aspartate ox 98.3 1.9E-06 6.5E-11 89.0 10.1 35 59-97 7-41 (540)
216 1v59_A Dihydrolipoamide dehydr 98.3 7.5E-07 2.6E-11 90.9 7.0 98 60-185 183-289 (478)
217 2aqj_A Tryptophan halogenase, 98.3 3.3E-07 1.1E-11 95.0 4.4 45 139-184 175-223 (538)
218 1zmd_A Dihydrolipoyl dehydroge 98.3 9.7E-07 3.3E-11 89.9 7.5 99 60-185 178-284 (474)
219 4b1b_A TRXR, thioredoxin reduc 98.3 1.5E-06 5E-11 89.5 8.7 98 58-184 221-320 (542)
220 1xdi_A RV3303C-LPDA; reductase 98.3 1.3E-06 4.4E-11 89.6 8.3 99 59-185 181-281 (499)
221 2a8x_A Dihydrolipoyl dehydroge 98.3 9.7E-07 3.3E-11 89.7 7.3 99 59-185 170-273 (464)
222 2a87_A TRXR, TR, thioredoxin r 98.3 2.7E-06 9.3E-11 82.3 10.2 100 216-319 14-129 (335)
223 2bc0_A NADH oxidase; flavoprot 98.3 1.6E-06 5.5E-11 88.7 8.7 98 59-184 193-292 (490)
224 3c4n_A Uncharacterized protein 98.3 2.4E-07 8.1E-12 92.5 2.3 35 59-96 35-71 (405)
225 3da1_A Glycerol-3-phosphate de 98.3 2.9E-06 9.9E-11 88.1 10.5 58 258-316 170-232 (561)
226 4a5l_A Thioredoxin reductase; 98.3 4.6E-06 1.6E-10 79.8 11.2 99 218-319 6-124 (314)
227 2gv8_A Monooxygenase; FMO, FAD 98.2 4.9E-06 1.7E-10 84.0 11.6 102 215-318 5-181 (447)
228 1yvv_A Amine oxidase, flavin-c 98.2 8.8E-06 3E-10 78.6 13.0 97 217-316 3-162 (336)
229 3kd9_A Coenzyme A disulfide re 98.2 2.2E-06 7.6E-11 86.6 9.0 100 216-319 3-117 (449)
230 3cty_A Thioredoxin reductase; 98.2 5.6E-06 1.9E-10 79.4 11.3 99 216-318 16-128 (319)
231 3oc4_A Oxidoreductase, pyridin 98.2 2.1E-06 7.1E-11 86.9 8.5 101 217-319 3-118 (452)
232 2qae_A Lipoamide, dihydrolipoy 98.2 1.6E-06 5.4E-11 88.2 7.7 99 59-185 173-278 (468)
233 1k0i_A P-hydroxybenzoate hydro 98.2 5.6E-06 1.9E-10 82.0 11.5 101 217-318 3-165 (394)
234 2cdu_A NADPH oxidase; flavoenz 98.2 1.8E-06 6.3E-11 87.3 8.1 98 60-184 149-248 (452)
235 1ryi_A Glycine oxidase; flavop 98.2 5.3E-06 1.8E-10 81.8 11.3 63 259-325 165-227 (382)
236 3jsk_A Cypbp37 protein; octame 98.2 1.3E-06 4.6E-11 83.7 6.6 37 59-98 78-116 (344)
237 3cgb_A Pyridine nucleotide-dis 98.2 1.5E-06 5.2E-11 88.6 7.3 97 59-184 185-283 (480)
238 2zxi_A TRNA uridine 5-carboxym 98.2 9E-06 3.1E-10 84.1 12.8 100 217-318 28-182 (637)
239 2wdq_A Succinate dehydrogenase 98.2 1.6E-06 5.4E-11 90.6 7.2 35 60-97 7-41 (588)
240 3o0h_A Glutathione reductase; 98.2 2.3E-06 7.8E-11 87.4 8.3 98 59-184 190-289 (484)
241 1dxl_A Dihydrolipoamide dehydr 98.2 1.2E-06 4E-11 89.3 6.1 99 59-185 176-281 (470)
242 3r9u_A Thioredoxin reductase; 98.2 4.5E-06 1.5E-10 79.7 9.8 99 216-319 4-121 (315)
243 2vou_A 2,6-dihydroxypyridine h 98.2 5.3E-06 1.8E-10 82.4 10.6 100 216-317 5-154 (397)
244 1w4x_A Phenylacetone monooxyge 98.2 1.7E-05 5.8E-10 82.1 14.7 98 217-314 17-152 (542)
245 3s5w_A L-ornithine 5-monooxyge 98.2 2.5E-06 8.4E-11 86.6 8.2 102 218-319 32-195 (463)
246 2dkh_A 3-hydroxybenzoate hydro 98.2 9.1E-07 3.1E-11 93.5 5.1 37 59-98 31-68 (639)
247 3ces_A MNMG, tRNA uridine 5-ca 98.2 1.1E-05 3.8E-10 83.8 12.9 99 217-317 29-182 (651)
248 3ntd_A FAD-dependent pyridine 98.2 2.4E-06 8.4E-11 89.0 8.0 98 59-184 150-268 (565)
249 1zk7_A HGII, reductase, mercur 98.2 2.8E-06 9.5E-11 86.4 8.0 96 59-184 175-272 (467)
250 3iwa_A FAD-dependent pyridine 98.2 4.3E-06 1.5E-10 85.1 9.4 102 216-319 3-128 (472)
251 2h88_A Succinate dehydrogenase 98.2 2.2E-06 7.4E-11 89.7 7.3 34 60-96 18-51 (621)
252 3atr_A Conserved archaeal prot 98.2 1.2E-05 3.9E-10 81.4 12.4 100 217-317 7-163 (453)
253 1pj5_A N,N-dimethylglycine oxi 98.2 1.9E-06 6.6E-11 94.0 6.8 37 59-97 3-39 (830)
254 3cp8_A TRNA uridine 5-carboxym 98.1 1.4E-05 4.7E-10 83.0 12.7 101 215-317 20-175 (641)
255 1y56_B Sarcosine oxidase; dehy 98.1 1.6E-05 5.4E-10 78.3 12.8 54 262-317 153-206 (382)
256 3jsk_A Cypbp37 protein; octame 98.1 2.7E-05 9.4E-10 74.6 13.8 139 216-354 79-304 (344)
257 3ic9_A Dihydrolipoamide dehydr 98.1 3.2E-06 1.1E-10 86.5 7.6 98 59-185 173-276 (492)
258 3lad_A Dihydrolipoamide dehydr 98.1 4.1E-06 1.4E-10 85.3 8.3 99 59-185 179-282 (476)
259 4dna_A Probable glutathione re 98.1 4.1E-06 1.4E-10 85.0 8.0 98 59-185 169-270 (463)
260 2gmh_A Electron transfer flavo 98.1 2.2E-05 7.7E-10 81.8 13.7 101 217-317 36-218 (584)
261 4gcm_A TRXR, thioredoxin reduc 98.1 1.8E-05 6.2E-10 75.6 12.0 98 218-319 8-119 (312)
262 4hb9_A Similarities with proba 98.1 1.4E-05 4.9E-10 79.3 11.8 99 217-316 2-166 (412)
263 2weu_A Tryptophan 5-halogenase 98.1 3.4E-06 1.2E-10 86.8 7.3 45 139-184 183-231 (511)
264 3cgv_A Geranylgeranyl reductas 98.1 1.1E-05 3.9E-10 79.7 10.9 99 217-316 5-162 (397)
265 3urh_A Dihydrolipoyl dehydroge 98.1 3.7E-06 1.3E-10 86.0 7.4 99 59-185 197-302 (491)
266 2bs2_A Quinol-fumarate reducta 98.1 3.5E-06 1.2E-10 88.8 7.3 34 60-96 5-38 (660)
267 1m6i_A Programmed cell death p 98.1 4.9E-06 1.7E-10 85.1 8.2 101 60-184 180-283 (493)
268 3i3l_A Alkylhalidase CMLS; fla 98.1 1.8E-05 6.2E-10 82.4 12.2 100 216-316 23-188 (591)
269 2gjc_A Thiazole biosynthetic e 98.1 6E-06 2.1E-10 78.7 7.6 37 59-98 64-102 (326)
270 3dgh_A TRXR-1, thioredoxin red 98.1 3.4E-06 1.2E-10 86.1 6.2 97 59-184 186-290 (483)
271 3e1t_A Halogenase; flavoprotei 98.1 2.4E-05 8.4E-10 80.3 12.5 99 217-316 8-172 (512)
272 2r0c_A REBC; flavin adenine di 98.1 4E-06 1.4E-10 87.0 6.6 36 60-98 26-61 (549)
273 3dk9_A Grase, GR, glutathione 98.0 4.6E-06 1.6E-10 85.0 6.8 98 60-185 187-295 (478)
274 3gyx_A Adenylylsulfate reducta 98.0 4E-06 1.4E-10 88.3 6.4 35 60-97 22-62 (662)
275 3qj4_A Renalase; FAD/NAD(P)-bi 98.0 1.9E-05 6.4E-10 76.6 10.8 95 218-314 3-163 (342)
276 2uzz_A N-methyl-L-tryptophan o 98.0 3.3E-05 1.1E-09 75.7 12.3 54 260-316 151-204 (372)
277 3dgz_A Thioredoxin reductase 2 98.0 6.7E-06 2.3E-10 84.0 7.0 98 59-185 184-289 (488)
278 3fmw_A Oxygenase; mithramycin, 98.0 2E-05 6.9E-10 81.9 10.6 98 217-316 50-207 (570)
279 2aqj_A Tryptophan halogenase, 98.0 6.9E-05 2.4E-09 77.5 14.6 55 262-317 169-223 (538)
280 2gjc_A Thiazole biosynthetic e 98.0 4.5E-05 1.6E-09 72.6 12.1 101 217-317 66-240 (326)
281 2vdc_G Glutamate synthase [NAD 98.0 4E-06 1.4E-10 84.6 5.0 90 215-315 121-218 (456)
282 3l8k_A Dihydrolipoyl dehydroge 98.0 1.7E-05 5.7E-10 80.5 9.5 98 217-319 5-147 (466)
283 3rp8_A Flavoprotein monooxygen 98.0 3.1E-05 1.1E-09 77.0 11.1 100 215-318 22-183 (407)
284 3ihg_A RDME; flavoenzyme, anth 98.0 3.3E-05 1.1E-09 79.9 11.6 99 217-316 6-183 (535)
285 2xdo_A TETX2 protein; tetracyc 97.9 3.8E-05 1.3E-09 76.1 10.8 101 215-317 25-183 (398)
286 4g6h_A Rotenone-insensitive NA 97.9 9E-06 3.1E-10 83.1 6.1 99 61-184 218-333 (502)
287 4at0_A 3-ketosteroid-delta4-5a 97.9 7.5E-05 2.6E-09 76.6 12.6 58 259-316 203-264 (510)
288 4gut_A Lysine-specific histone 97.9 5.2E-05 1.8E-09 81.3 11.5 37 58-97 334-370 (776)
289 1y56_A Hypothetical protein PH 97.9 1.8E-05 6.2E-10 80.9 7.5 101 216-319 108-222 (493)
290 3qfa_A Thioredoxin reductase 1 97.9 1.8E-05 6.2E-10 81.4 7.5 97 60-185 210-317 (519)
291 1pn0_A Phenol 2-monooxygenase; 97.9 3.7E-06 1.3E-10 89.1 2.2 35 60-97 8-47 (665)
292 2qa2_A CABE, polyketide oxygen 97.8 0.00012 4E-09 74.9 12.6 100 215-316 11-166 (499)
293 3k30_A Histamine dehydrogenase 97.8 1.6E-05 5.6E-10 84.7 6.3 99 59-184 522-625 (690)
294 2x8g_A Thioredoxin glutathione 97.8 3E-05 1E-09 81.3 7.9 97 60-185 286-397 (598)
295 3c96_A Flavin-containing monoo 97.8 6.9E-05 2.4E-09 74.6 10.2 99 216-317 4-170 (410)
296 3ihm_A Styrene monooxygenase A 97.8 1.4E-05 4.7E-10 80.3 4.8 35 59-96 21-55 (430)
297 2gag_A Heterotetrameric sarcos 97.8 0.00011 3.7E-09 81.2 12.0 102 216-319 128-256 (965)
298 2pyx_A Tryptophan halogenase; 97.8 0.00018 6.2E-09 74.1 12.9 55 262-317 179-234 (526)
299 2qa1_A PGAE, polyketide oxygen 97.8 0.00014 4.7E-09 74.4 11.9 101 214-316 9-165 (500)
300 2weu_A Tryptophan 5-halogenase 97.8 0.00016 5.5E-09 74.2 12.4 55 262-317 177-231 (511)
301 2oln_A NIKD protein; flavoprot 97.8 0.00017 6E-09 71.2 12.3 59 263-325 158-216 (397)
302 1c0p_A D-amino acid oxidase; a 97.8 2.2E-05 7.6E-10 76.8 5.5 37 57-96 3-39 (363)
303 3i6d_A Protoporphyrinogen oxid 97.7 1.2E-05 4E-10 81.6 3.5 40 273-314 248-287 (470)
304 3c4n_A Uncharacterized protein 97.7 6.1E-05 2.1E-09 74.9 8.3 63 260-326 174-246 (405)
305 1pj5_A N,N-dimethylglycine oxi 97.7 0.00018 6.2E-09 78.3 12.6 55 260-316 153-207 (830)
306 2e1m_A L-glutamate oxidase; L- 97.7 3.6E-05 1.2E-09 75.2 6.1 40 56-98 40-80 (376)
307 1gte_A Dihydropyrimidine dehyd 97.7 1.7E-05 5.9E-10 88.1 4.3 93 216-317 187-289 (1025)
308 1cjc_A Protein (adrenodoxin re 97.7 1.4E-05 4.7E-10 80.9 3.1 91 215-316 5-106 (460)
309 1ps9_A 2,4-dienoyl-COA reducta 97.7 6.4E-05 2.2E-09 79.8 7.8 47 136-184 580-629 (671)
310 2b9w_A Putative aminooxidase; 97.6 4.4E-05 1.5E-09 76.3 6.0 53 260-315 205-257 (424)
311 3nks_A Protoporphyrinogen oxid 97.6 3.8E-05 1.3E-09 78.1 5.3 54 259-314 235-288 (477)
312 1lqt_A FPRA; NADP+ derivative, 97.6 1.4E-05 5E-10 80.6 2.1 89 216-315 3-107 (456)
313 2bcg_G Secretory pathway GDP d 97.6 5E-05 1.7E-09 76.7 5.9 59 258-317 242-301 (453)
314 1rsg_A FMS1 protein; FAD bindi 97.6 3E-05 1E-09 79.7 4.2 38 59-99 7-45 (516)
315 1v0j_A UDP-galactopyranose mut 97.6 5.5E-05 1.9E-09 75.0 5.8 38 59-99 6-44 (399)
316 2jae_A L-amino acid oxidase; o 97.6 5.6E-05 1.9E-09 77.2 5.9 38 58-98 9-46 (489)
317 2yg5_A Putrescine oxidase; oxi 97.6 3.2E-05 1.1E-09 78.1 4.0 36 60-98 5-40 (453)
318 3hdq_A UDP-galactopyranose mut 97.6 6.6E-05 2.3E-09 73.9 5.6 39 57-98 26-64 (397)
319 1o94_A Tmadh, trimethylamine d 97.5 5.5E-05 1.9E-09 81.0 5.2 98 59-184 527-647 (729)
320 2qcu_A Aerobic glycerol-3-phos 97.5 0.00053 1.8E-08 70.1 12.3 56 260-317 151-211 (501)
321 2e5v_A L-aspartate oxidase; ar 97.5 0.00041 1.4E-08 70.3 10.9 98 218-317 1-177 (472)
322 3c4a_A Probable tryptophan hyd 97.5 7.4E-05 2.5E-09 73.6 5.0 35 61-98 1-37 (381)
323 2wdq_A Succinate dehydrogenase 97.5 0.00098 3.3E-08 69.4 13.7 52 264-315 149-205 (588)
324 2pyx_A Tryptophan halogenase; 97.5 7.7E-05 2.6E-09 76.9 5.1 44 140-184 186-234 (526)
325 3lov_A Protoporphyrinogen oxid 97.5 8.4E-05 2.9E-09 75.5 5.2 38 60-98 4-41 (475)
326 2ivd_A PPO, PPOX, protoporphyr 97.5 8.3E-05 2.8E-09 75.6 5.1 38 58-98 14-51 (478)
327 3g5s_A Methylenetetrahydrofola 97.4 0.00012 4E-09 70.9 5.3 35 60-97 1-35 (443)
328 2xag_A Lysine-specific histone 97.4 4E-05 1.4E-09 82.8 2.1 38 58-98 276-313 (852)
329 1sez_A Protoporphyrinogen oxid 97.4 0.00011 3.8E-09 75.2 5.1 37 59-98 12-48 (504)
330 3g3e_A D-amino-acid oxidase; F 97.4 8.3E-05 2.8E-09 72.3 4.0 36 61-96 1-39 (351)
331 2iid_A L-amino-acid oxidase; f 97.4 0.00013 4.6E-09 74.5 5.7 39 57-98 30-68 (498)
332 4dsg_A UDP-galactopyranose mut 97.4 0.00015 5.1E-09 73.8 5.8 38 58-98 7-45 (484)
333 2vvm_A Monoamine oxidase N; FA 97.4 0.00012 4.3E-09 74.7 5.2 56 258-315 255-311 (495)
334 3c4a_A Probable tryptophan hyd 97.4 0.00012 4.1E-09 72.1 4.8 88 217-317 1-144 (381)
335 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00079 2.7E-08 71.0 11.2 100 217-316 33-211 (639)
336 1kf6_A Fumarate reductase flav 97.3 0.0011 3.6E-08 69.3 11.6 97 217-314 6-195 (602)
337 1i8t_A UDP-galactopyranose mut 97.3 0.00014 4.7E-09 71.2 4.5 35 61-98 2-36 (367)
338 2bi7_A UDP-galactopyranose mut 97.3 0.00017 5.9E-09 71.0 5.1 37 60-99 3-39 (384)
339 1chu_A Protein (L-aspartate ox 97.2 0.00098 3.4E-08 68.6 9.4 33 217-250 9-41 (540)
340 2r0c_A REBC; flavin adenine di 97.2 0.0021 7E-08 66.5 11.7 95 217-316 27-196 (549)
341 1d5t_A Guanine nucleotide diss 97.2 0.00036 1.2E-08 69.9 5.7 58 258-317 234-291 (433)
342 2rgh_A Alpha-glycerophosphate 97.1 0.0032 1.1E-07 65.3 12.9 52 264-316 194-250 (571)
343 2rgh_A Alpha-glycerophosphate 97.1 0.00032 1.1E-08 72.9 5.1 35 59-96 31-65 (571)
344 2z3y_A Lysine-specific histone 97.1 0.00043 1.5E-08 73.3 5.8 39 57-98 104-142 (662)
345 3p1w_A Rabgdi protein; GDI RAB 97.1 0.00044 1.5E-08 69.6 5.0 58 258-315 256-313 (475)
346 2h88_A Succinate dehydrogenase 97.0 0.0037 1.3E-07 65.3 11.7 51 265-316 162-217 (621)
347 4gde_A UDP-galactopyranose mut 97.0 0.00099 3.4E-08 68.2 7.1 49 262-314 226-274 (513)
348 1jnr_A Adenylylsulfate reducta 97.0 0.00052 1.8E-08 72.3 4.9 36 59-97 21-60 (643)
349 3i6d_A Protoporphyrinogen oxid 96.9 0.0058 2E-07 61.5 11.5 35 217-251 6-46 (470)
350 2bs2_A Quinol-fumarate reducta 96.8 0.0069 2.4E-07 63.7 12.2 50 265-315 165-219 (660)
351 1b37_A Protein (polyamine oxid 96.8 0.0011 3.9E-08 67.0 5.6 41 272-314 228-268 (472)
352 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00055 1.9E-08 72.1 3.2 36 60-98 56-100 (721)
353 4gut_A Lysine-specific histone 96.7 0.0078 2.7E-07 64.5 11.8 42 271-314 542-583 (776)
354 1kdg_A CDH, cellobiose dehydro 96.7 0.0011 3.7E-08 68.5 5.0 64 263-327 201-272 (546)
355 1pn0_A Phenol 2-monooxygenase; 96.7 0.0059 2E-07 64.5 10.6 32 217-248 9-45 (665)
356 3eag_A UDP-N-acetylmuramate:L- 96.7 0.0036 1.2E-07 59.9 7.8 75 60-184 4-79 (326)
357 3lk7_A UDP-N-acetylmuramoylala 96.6 0.0038 1.3E-07 62.7 8.1 133 59-245 8-144 (451)
358 1jnr_A Adenylylsulfate reducta 96.5 0.012 4E-07 62.0 11.3 50 267-316 160-218 (643)
359 1ju2_A HydroxynitrIle lyase; f 96.4 0.0011 3.7E-08 68.3 2.7 59 268-326 204-271 (536)
360 3kkj_A Amine oxidase, flavin-c 96.3 0.0031 1.1E-07 58.0 5.1 34 218-251 4-37 (336)
361 3q9t_A Choline dehydrogenase a 96.3 0.002 6.9E-08 66.7 3.9 37 59-97 5-41 (577)
362 3t37_A Probable dehydrogenase; 96.2 0.0022 7.5E-08 65.9 3.7 57 269-326 222-281 (526)
363 4b63_A L-ornithine N5 monooxyg 96.2 0.019 6.6E-07 58.4 10.5 61 259-319 146-217 (501)
364 3gyx_A Adenylylsulfate reducta 96.1 0.012 4E-07 62.0 8.2 32 217-248 23-60 (662)
365 3lk7_A UDP-N-acetylmuramoylala 96.1 0.0053 1.8E-07 61.6 5.3 82 215-321 8-89 (451)
366 3qvp_A Glucose oxidase; oxidor 96.0 0.0035 1.2E-07 64.9 3.9 78 262-340 231-327 (583)
367 1n4w_A CHOD, cholesterol oxida 96.0 0.0048 1.6E-07 63.0 4.8 58 268-325 231-297 (504)
368 1coy_A Cholesterol oxidase; ox 95.9 0.0061 2.1E-07 62.2 5.0 63 263-325 232-302 (507)
369 4dgk_A Phytoene dehydrogenase; 95.8 0.0062 2.1E-07 62.0 4.4 37 217-253 2-38 (501)
370 3eag_A UDP-N-acetylmuramate:L- 95.7 0.012 4.2E-07 56.2 6.1 80 215-321 3-83 (326)
371 4g65_A TRK system potassium up 95.7 0.016 5.4E-07 58.2 6.8 33 61-96 4-36 (461)
372 1gpe_A Protein (glucose oxidas 95.7 0.0082 2.8E-07 62.4 4.9 61 266-326 239-307 (587)
373 3fwz_A Inner membrane protein 95.7 0.016 5.6E-07 47.7 5.8 37 57-96 4-40 (140)
374 2jbv_A Choline oxidase; alcoho 95.6 0.0069 2.4E-07 62.4 4.1 64 263-326 214-283 (546)
375 3p1w_A Rabgdi protein; GDI RAB 95.6 0.026 8.9E-07 56.6 7.8 40 57-99 17-56 (475)
376 3fim_B ARYL-alcohol oxidase; A 95.5 0.0051 1.8E-07 63.5 2.7 36 60-98 2-38 (566)
377 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.012 4.2E-07 52.5 4.7 107 215-353 30-141 (223)
378 2g1u_A Hypothetical protein TM 95.2 0.021 7.2E-07 47.9 5.1 37 57-96 16-52 (155)
379 1id1_A Putative potassium chan 95.1 0.028 9.4E-07 47.0 5.5 34 60-96 3-36 (153)
380 4hv4_A UDP-N-acetylmuramate--L 94.7 0.024 8.1E-07 57.5 4.7 74 58-184 20-94 (494)
381 3llv_A Exopolyphosphatase-rela 94.7 0.038 1.3E-06 45.4 5.2 34 60-96 6-39 (141)
382 4gx0_A TRKA domain protein; me 94.7 0.097 3.3E-06 54.1 9.3 36 217-252 349-384 (565)
383 2iid_A L-amino-acid oxidase; f 94.6 0.035 1.2E-06 56.3 5.9 39 215-253 32-70 (498)
384 3ic5_A Putative saccharopine d 94.6 0.03 1E-06 44.1 4.3 34 60-96 5-39 (118)
385 3nrn_A Uncharacterized protein 94.6 0.032 1.1E-06 55.3 5.3 35 217-251 1-35 (421)
386 3i83_A 2-dehydropantoate 2-red 94.5 0.13 4.5E-06 48.8 9.3 85 217-324 3-91 (320)
387 3dfz_A SIRC, precorrin-2 dehyd 94.4 0.037 1.3E-06 49.4 4.8 37 57-96 28-64 (223)
388 3ka7_A Oxidoreductase; structu 94.3 0.037 1.3E-06 54.7 5.2 35 217-251 1-35 (425)
389 3ihm_A Styrene monooxygenase A 94.2 0.035 1.2E-06 55.2 4.7 34 216-249 22-55 (430)
390 1lss_A TRK system potassium up 94.2 0.05 1.7E-06 44.3 4.8 33 61-96 5-37 (140)
391 3fpz_A Thiazole biosynthetic e 94.2 0.021 7.3E-07 54.4 2.9 66 216-281 65-139 (326)
392 2x5o_A UDP-N-acetylmuramoylala 94.1 0.037 1.3E-06 55.2 4.6 130 60-246 5-137 (439)
393 3dme_A Conserved exported prot 94.1 0.046 1.6E-06 52.7 5.2 33 217-249 5-37 (369)
394 3k7m_X 6-hydroxy-L-nicotine ox 94.0 0.048 1.6E-06 54.1 5.2 34 218-251 3-36 (431)
395 3g5s_A Methylenetetrahydrofola 94.0 0.054 1.9E-06 52.5 5.1 33 217-249 2-34 (443)
396 2b9w_A Putative aminooxidase; 93.9 0.056 1.9E-06 53.5 5.5 38 215-252 5-43 (424)
397 3fwz_A Inner membrane protein 93.9 0.096 3.3E-06 42.9 6.0 77 216-316 7-83 (140)
398 2e1m_A L-glutamate oxidase; L- 93.9 0.06 2.1E-06 52.3 5.5 37 215-251 43-80 (376)
399 4hv4_A UDP-N-acetylmuramate--L 93.9 0.054 1.9E-06 54.9 5.3 77 214-320 20-97 (494)
400 3nks_A Protoporphyrinogen oxid 93.9 0.051 1.7E-06 54.7 5.1 35 217-251 3-39 (477)
401 2g1u_A Hypothetical protein TM 93.8 0.091 3.1E-06 43.9 5.8 37 214-250 17-53 (155)
402 3nix_A Flavoprotein/dehydrogen 93.7 0.058 2E-06 53.3 5.1 33 217-249 6-38 (421)
403 3c85_A Putative glutathione-re 93.7 0.083 2.8E-06 45.5 5.5 36 58-96 37-73 (183)
404 1rsg_A FMS1 protein; FAD bindi 93.7 0.057 2E-06 55.1 5.2 36 216-251 8-44 (516)
405 2bcg_G Secretory pathway GDP d 93.7 0.06 2.1E-06 53.9 5.2 39 216-254 11-49 (453)
406 2ivd_A PPO, PPOX, protoporphyr 93.7 0.059 2E-06 54.2 5.2 38 214-251 14-51 (478)
407 2jae_A L-amino acid oxidase; o 93.6 0.066 2.2E-06 54.1 5.5 40 214-253 9-48 (489)
408 2hmt_A YUAA protein; RCK, KTN, 93.6 0.067 2.3E-06 43.7 4.6 34 60-96 6-39 (144)
409 2gf3_A MSOX, monomeric sarcosi 93.6 0.063 2.2E-06 52.3 5.1 34 217-250 4-37 (389)
410 3nyc_A D-arginine dehydrogenas 93.5 0.063 2.2E-06 52.1 4.9 36 215-251 8-43 (381)
411 1c0p_A D-amino acid oxidase; a 93.4 0.074 2.5E-06 51.4 5.2 33 216-248 6-38 (363)
412 1s3e_A Amine oxidase [flavin-c 93.4 0.067 2.3E-06 54.6 5.1 61 216-277 4-81 (520)
413 1kyq_A Met8P, siroheme biosynt 93.4 0.041 1.4E-06 50.7 3.0 37 58-97 11-47 (274)
414 3llv_A Exopolyphosphatase-rela 93.2 0.14 4.8E-06 41.8 6.0 33 216-248 6-38 (141)
415 2x5o_A UDP-N-acetylmuramoylala 93.2 0.03 1E-06 55.9 2.1 78 215-321 4-81 (439)
416 3hn7_A UDP-N-acetylmuramate-L- 93.1 0.16 5.4E-06 51.9 7.2 131 60-245 19-154 (524)
417 3hn7_A UDP-N-acetylmuramate-L- 93.0 0.11 3.8E-06 53.0 6.0 80 214-321 17-97 (524)
418 2bi7_A UDP-galactopyranose mut 93.0 0.1 3.6E-06 50.9 5.5 36 217-252 4-39 (384)
419 1vg0_A RAB proteins geranylger 93.0 0.1 3.6E-06 54.1 5.7 61 257-317 377-438 (650)
420 4ffl_A PYLC; amino acid, biosy 92.8 0.11 3.8E-06 50.2 5.5 36 60-98 1-36 (363)
421 2yg5_A Putrescine oxidase; oxi 92.7 0.11 3.6E-06 52.0 5.2 36 217-252 6-41 (453)
422 1sez_A Protoporphyrinogen oxid 92.7 0.11 3.8E-06 52.7 5.4 38 215-252 12-49 (504)
423 3dje_A Fructosyl amine: oxygen 92.6 0.11 3.6E-06 51.7 5.2 35 216-250 6-41 (438)
424 3hdq_A UDP-galactopyranose mut 92.6 0.12 4.3E-06 50.5 5.4 37 216-252 29-65 (397)
425 3hn2_A 2-dehydropantoate 2-red 92.6 0.15 5.2E-06 48.1 5.9 85 217-323 3-88 (312)
426 2gag_B Heterotetrameric sarcos 92.5 0.089 3E-06 51.5 4.4 33 217-249 22-56 (405)
427 3hwr_A 2-dehydropantoate 2-red 92.4 0.17 5.7E-06 48.0 6.0 33 215-248 18-50 (318)
428 4dio_A NAD(P) transhydrogenase 92.4 0.13 4.5E-06 50.0 5.3 35 59-96 189-223 (405)
429 3ps9_A TRNA 5-methylaminomethy 92.4 0.13 4.5E-06 54.3 5.7 34 217-250 273-306 (676)
430 1id1_A Putative potassium chan 92.4 0.18 6.2E-06 41.9 5.5 33 216-248 3-35 (153)
431 3g3e_A D-amino-acid oxidase; F 92.3 0.087 3E-06 50.6 4.0 32 218-249 2-39 (351)
432 3pvc_A TRNA 5-methylaminomethy 92.3 0.13 4.4E-06 54.6 5.5 35 217-251 265-299 (689)
433 1v0j_A UDP-galactopyranose mut 92.3 0.11 3.7E-06 51.1 4.6 37 216-252 7-44 (399)
434 1i8t_A UDP-galactopyranose mut 92.2 0.14 4.6E-06 49.7 5.2 35 218-252 3-37 (367)
435 2e4g_A Tryptophan halogenase; 92.0 0.15 5.3E-06 52.3 5.5 34 216-249 25-61 (550)
436 1f0y_A HCDH, L-3-hydroxyacyl-C 91.9 0.18 6.1E-06 47.4 5.5 36 58-96 13-48 (302)
437 3p2y_A Alanine dehydrogenase/p 91.9 0.14 4.8E-06 49.4 4.8 35 59-96 183-217 (381)
438 2vvm_A Monoamine oxidase N; FA 91.9 0.34 1.1E-05 48.9 7.9 36 60-98 39-74 (495)
439 1vl6_A Malate oxidoreductase; 91.9 0.16 5.4E-06 49.0 5.0 37 58-96 190-226 (388)
440 1jw9_B Molybdopterin biosynthe 91.8 0.16 5.4E-06 46.3 4.8 36 60-97 31-66 (249)
441 2a9f_A Putative malic enzyme ( 91.8 0.16 5.5E-06 49.0 4.9 37 58-96 186-222 (398)
442 2z3y_A Lysine-specific histone 91.6 0.17 5.9E-06 53.3 5.5 37 215-251 106-142 (662)
443 3ego_A Probable 2-dehydropanto 91.5 0.39 1.3E-05 45.2 7.3 76 217-315 3-78 (307)
444 3l4b_C TRKA K+ channel protien 91.5 0.18 6E-06 44.8 4.7 32 62-96 2-33 (218)
445 2xag_A Lysine-specific histone 91.5 0.18 6.2E-06 54.4 5.6 36 216-251 278-313 (852)
446 3lov_A Protoporphyrinogen oxid 91.5 0.14 4.8E-06 51.5 4.4 34 217-250 5-40 (475)
447 4e12_A Diketoreductase; oxidor 91.4 0.22 7.4E-06 46.3 5.4 34 60-96 4-37 (283)
448 1vg0_A RAB proteins geranylger 91.4 0.61 2.1E-05 48.4 9.1 39 58-99 6-44 (650)
449 1lss_A TRK system potassium up 91.4 0.25 8.5E-06 39.9 5.2 33 216-248 4-36 (140)
450 3da1_A Glycerol-3-phosphate de 91.2 0.19 6.6E-06 51.7 5.3 34 216-249 18-51 (561)
451 1kyq_A Met8P, siroheme biosynt 91.2 0.16 5.6E-06 46.7 4.2 34 215-248 12-45 (274)
452 2ew2_A 2-dehydropantoate 2-red 91.1 0.15 5.3E-06 47.9 4.1 32 217-248 4-35 (316)
453 3ghy_A Ketopantoate reductase 90.9 0.21 7.1E-06 47.7 4.8 77 217-315 4-81 (335)
454 3ic5_A Putative saccharopine d 90.9 0.23 8E-06 38.7 4.4 33 216-248 5-38 (118)
455 4dsg_A UDP-galactopyranose mut 90.7 0.28 9.7E-06 49.4 5.8 38 215-252 8-46 (484)
456 1d5t_A Guanine nucleotide diss 90.7 0.23 7.9E-06 49.3 5.1 39 58-99 4-42 (433)
457 1x13_A NAD(P) transhydrogenase 90.6 0.24 8.2E-06 48.5 5.0 34 60-96 172-205 (401)
458 3ado_A Lambda-crystallin; L-gu 90.6 0.32 1.1E-05 45.9 5.6 39 215-253 5-43 (319)
459 3axb_A Putative oxidoreductase 90.6 0.15 5E-06 50.9 3.6 31 217-247 24-55 (448)
460 2hmt_A YUAA protein; RCK, KTN, 90.5 0.29 9.9E-06 39.7 4.8 33 216-248 6-38 (144)
461 3rui_A Ubiquitin-like modifier 90.4 0.28 9.7E-06 46.5 5.2 36 60-97 34-69 (340)
462 1l7d_A Nicotinamide nucleotide 90.3 0.29 9.9E-06 47.7 5.3 35 59-96 171-205 (384)
463 1pjq_A CYSG, siroheme synthase 90.3 0.22 7.5E-06 49.8 4.5 35 59-96 11-45 (457)
464 3pqe_A L-LDH, L-lactate dehydr 90.3 0.32 1.1E-05 46.1 5.4 36 59-95 4-39 (326)
465 1y6j_A L-lactate dehydrogenase 90.2 0.31 1.1E-05 46.1 5.3 36 60-96 7-42 (318)
466 1zud_1 Adenylyltransferase THI 90.0 0.28 9.7E-06 44.6 4.6 36 60-97 28-63 (251)
467 3tl2_A Malate dehydrogenase; c 89.9 0.36 1.2E-05 45.5 5.4 37 57-95 5-41 (315)
468 3h8v_A Ubiquitin-like modifier 89.6 0.29 9.8E-06 45.5 4.4 37 59-97 35-71 (292)
469 3i83_A 2-dehydropantoate 2-red 89.5 0.34 1.2E-05 45.9 5.0 33 61-96 3-35 (320)
470 3k96_A Glycerol-3-phosphate de 89.5 0.36 1.2E-05 46.5 5.2 38 56-96 25-62 (356)
471 1pjc_A Protein (L-alanine dehy 89.5 0.35 1.2E-05 46.7 5.1 34 60-96 167-200 (361)
472 1pzg_A LDH, lactate dehydrogen 89.3 0.45 1.5E-05 45.3 5.7 35 60-96 9-43 (331)
473 3ado_A Lambda-crystallin; L-gu 89.3 0.32 1.1E-05 45.9 4.5 34 60-96 6-39 (319)
474 3phh_A Shikimate dehydrogenase 89.0 0.44 1.5E-05 43.7 5.2 34 60-96 118-151 (269)
475 3c85_A Putative glutathione-re 88.7 0.42 1.4E-05 40.9 4.6 34 216-249 39-73 (183)
476 1d4d_A Flavocytochrome C fumar 88.7 0.37 1.3E-05 49.7 4.9 36 216-251 126-161 (572)
477 3hn2_A 2-dehydropantoate 2-red 88.6 0.37 1.3E-05 45.4 4.6 32 61-95 3-34 (312)
478 1b37_A Protein (polyamine oxid 88.6 0.42 1.4E-05 47.9 5.2 38 216-253 4-42 (472)
479 3fi9_A Malate dehydrogenase; s 88.4 0.56 1.9E-05 44.7 5.6 36 59-95 7-43 (343)
480 4e12_A Diketoreductase; oxidor 88.4 0.61 2.1E-05 43.2 5.8 37 216-252 4-40 (283)
481 3ojo_A CAP5O; rossmann fold, c 88.3 1.5 5.2E-05 43.1 8.8 105 216-345 11-134 (431)
482 1nyt_A Shikimate 5-dehydrogena 88.2 0.51 1.7E-05 43.4 5.1 34 59-95 118-151 (271)
483 3oj0_A Glutr, glutamyl-tRNA re 88.2 0.19 6.3E-06 41.3 1.9 34 60-96 21-54 (144)
484 3h5n_A MCCB protein; ubiquitin 88.1 0.45 1.5E-05 45.7 4.8 36 60-97 118-153 (353)
485 1pjq_A CYSG, siroheme synthase 88.0 0.9 3.1E-05 45.3 7.1 78 215-320 11-89 (457)
486 2ew2_A 2-dehydropantoate 2-red 87.8 0.5 1.7E-05 44.3 4.9 33 61-96 4-36 (316)
487 3pl8_A Pyranose 2-oxidase; sub 87.8 0.48 1.6E-05 49.4 5.2 35 217-251 47-81 (623)
488 3l9w_A Glutathione-regulated p 87.8 0.43 1.5E-05 46.9 4.6 34 60-96 4-37 (413)
489 3gpi_A NAD-dependent epimerase 87.8 0.6 2.1E-05 43.1 5.4 34 60-96 3-36 (286)
490 2raf_A Putative dinucleotide-b 87.8 0.59 2E-05 41.1 5.0 35 59-96 18-52 (209)
491 3d0o_A L-LDH 1, L-lactate dehy 87.7 0.6 2.1E-05 44.1 5.4 36 59-95 5-40 (317)
492 3q2o_A Phosphoribosylaminoimid 87.7 0.71 2.4E-05 44.9 6.1 38 58-98 12-49 (389)
493 4ezb_A Uncharacterized conserv 87.7 0.5 1.7E-05 44.7 4.8 93 217-336 25-119 (317)
494 2dpo_A L-gulonate 3-dehydrogen 87.7 0.56 1.9E-05 44.3 5.1 34 60-96 6-39 (319)
495 2eez_A Alanine dehydrogenase; 87.6 0.55 1.9E-05 45.4 5.1 35 59-96 165-199 (369)
496 1bg6_A N-(1-D-carboxylethyl)-L 87.6 0.53 1.8E-05 45.1 5.1 33 61-96 5-37 (359)
497 1lld_A L-lactate dehydrogenase 87.6 0.59 2E-05 44.1 5.3 35 61-96 8-42 (319)
498 3jyo_A Quinate/shikimate dehyd 87.6 0.62 2.1E-05 43.2 5.2 36 58-95 125-160 (283)
499 3ius_A Uncharacterized conserv 87.5 0.44 1.5E-05 44.0 4.2 34 60-96 5-38 (286)
500 3ghy_A Ketopantoate reductase 87.5 0.59 2E-05 44.5 5.3 33 60-95 3-35 (335)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.2e-59 Score=472.84 Aligned_cols=396 Identities=30% Similarity=0.513 Sum_probs=350.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 137 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (497)
+++++|||||||+||++||.+|+++|+ +.+|+|||+++..+|+++++++.++.... ....+ .....+
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~-~~~~~-----------~~~~~~ 73 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREK-TFERI-----------CIRPAQ 73 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSS-CSGGG-----------BSSCHH
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCC-CHHHh-----------ccCCHH
Confidence 345799999999999999999999998 56799999999999999988876654321 11111 245678
Q ss_pred HHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhcc-C
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK-A 216 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~-~ 216 (497)
++.+.+++++.+++|+.+++..+.+.+++++.+.||+||+|||+.|+. |.++|.+.++++++++..+...+...+.. +
T Consensus 74 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~-~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~ 152 (415)
T 3lxd_A 74 FWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRR-LSCVGADLAGVHAVRTKEDADRLMAELDAGA 152 (415)
T ss_dssp HHHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCC-CBTTSSCCBTEECCCSHHHHHHHHHHHHTTC
T ss_pred HHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCC-CCCCCccccCEEEEcCHHHHHHHHHHhhhcC
Confidence 899999999999999999999999999999999999999999999874 55677777899999999999888887777 9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 296 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~ 296 (497)
++++|||+|++|+|+|..+.+.|.+|+++++.+.++++.+++.+.+.+.+.++++||++++++.|++++.. ++++..+.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~ 231 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVR 231 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEE
Confidence 99999999999999999999999999999999999988889999999999999999999999999999864 56777899
Q ss_pred eCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccC-CcccccccHHHHHHH
Q 010917 297 LEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY-DRTARVEHVDHARQS 375 (497)
Q Consensus 297 ~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~-g~~~~~~~~~~A~~~ 375 (497)
+.+|+++++|.||+|+|++|++++++++++..+ ++|.||++++|+.|+|||+|||+..+.... |...++++|..|..|
T Consensus 232 l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~q 310 (415)
T 3lxd_A 232 MQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NGVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDM 310 (415)
T ss_dssp ESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SSEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHH
T ss_pred eCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CCEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHH
Confidence 999999999999999999999999999999887 459999999999999999999999887666 777889999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceeeeccccCCCCcceeeEEeecCCC--cEEEEccCC-CcEEEEEEECCEEEEEEeecCC
Q 010917 376 AQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGS 452 (497)
Q Consensus 376 g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~ 452 (497)
|+.+|+||++. ..+|..+||||+++|+.. ++++|...+ +.+.+++.+ .+|.++|+++|+|+|+++ .|+
T Consensus 311 g~~aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 381 (415)
T 3lxd_A 311 ATAAAKDICGA-PVPYKATPWFWSNQYDLK-------LQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDC-VNM 381 (415)
T ss_dssp HHHHHHHHTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCSEEEEEEEGGGTEEEEEEEETTEEEEEEE-ESC
T ss_pred HHHHHHHhcCC-CCCCCCCCeeEeeeCCcE-------EEEEeCCCCCCEEEEEecCCCCeEEEEEEECCEEEEEEE-ECC
Confidence 99999999974 467999999999999865 899997653 566677764 679999999999999996 899
Q ss_pred hHHhhHHHHHHhCCCCCChhhhcCCC
Q 010917 453 PEEFQLLPTLARSQPFVDKAKLQQAS 478 (497)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (497)
+.....+++|++++..++++.+.|+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 407 (415)
T 3lxd_A 382 VKDYVQGKKLVEARAQIAPEQLADAG 407 (415)
T ss_dssp HHHHHHHHHHHHHTCCCCHHHHTCTT
T ss_pred hHHHHHHHHHHHCCCCCCHHHhcCCC
Confidence 99999999999999999988887664
No 2
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=6e-59 Score=469.02 Aligned_cols=393 Identities=29% Similarity=0.479 Sum_probs=350.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
+++|+|||||+||++||.+|+++|+ +.+|+|||++++.+|++|++++.++.... ....+ .....+++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~-~~~~~-----------~~~~~~~~ 67 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGG-DPNSL-----------MFRPEKFF 67 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCC-CTTSS-----------BSSCHHHH
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCC-CHHHc-----------cCCCHHHH
Confidence 3689999999999999999999998 67899999999999999999876664432 12222 24567889
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeE
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 219 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~v 219 (497)
.+.+++++. ++|+.++++.+.+.+++++.+.||+||+|||+.|+ .|.++|.+.++++++++..+...+...+..++++
T Consensus 68 ~~~~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~-~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~v 145 (404)
T 3fg2_P 68 QDQAIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNR-MLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHV 145 (404)
T ss_dssp HHTTEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEEC-CCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEE
T ss_pred HhCCCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCcc-CCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeE
Confidence 999999999 89999999999999999999999999999999887 4556787788999999999999988888889999
Q ss_pred EEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC
Q 010917 220 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 299 (497)
Q Consensus 220 vVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~ 299 (497)
+|||+|++|+|+|..+.+.|.+|+++++.+.++++.+++++.+.+.+.+++.||++++++.|++++.. ++++..+.+.+
T Consensus 146 vViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~d 224 (404)
T 3fg2_P 146 VVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSD 224 (404)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCC
Confidence 99999999999999999999999999999999988889999999999999999999999999999864 56777899999
Q ss_pred CcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHH
Q 010917 300 GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHC 379 (497)
Q Consensus 300 g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~ 379 (497)
|+++++|.||+|+|++|++++++++++..++ +|.||++++|+.|+|||+|||+..+....|...++++|..|..||+.+
T Consensus 225 G~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~-Gi~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~a 303 (404)
T 3fg2_P 225 GNTLPCDLVVVGVGVIPNVEIAAAAGLPTAA-GIIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCV 303 (404)
T ss_dssp SCEEECSEEEECCCEEECCHHHHHTTCCBSS-SEEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHH
T ss_pred CCEEEcCEEEECcCCccCHHHHHhCCCCCCC-CEEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHH
Confidence 9999999999999999999999999999874 599999999999999999999998877778778889999999999999
Q ss_pred HHHHhcCCCCCCCCCCceeeeccccCCCCcceeeEEeecCCC--cEEEEccCC-CcEEEEEEECCEEEEEEeecCChHHh
Q 010917 380 IKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEF 456 (497)
Q Consensus 380 a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 456 (497)
|.+|++. ..+|..+||||+++|+.. ++++|...+ +.+.+++.+ .+|.++|+++|+++|+++ .|++...
T Consensus 304 a~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 374 (404)
T 3fg2_P 304 AARLTGD-AKPYDGYPWFWSDQGDDK-------LQIVGLTAGFDQVVIRGSVAERSFSAFCYKAGKLIGIES-VNRAADH 374 (404)
T ss_dssp HHHTTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCCEEEEEEETTTTEEEEEEEETTEEEEEEE-ESCHHHH
T ss_pred HHHhCCC-CCCCCCCCceEeEECCcE-------EEEEeCCCCCCEEEEEecCCCCcEEEEEEECCEEEEEEE-eCCHHHH
Confidence 9999964 468999999999999865 889997643 566777764 679999999999999996 8999999
Q ss_pred hHHHHHHhCCCCCChhhhcCCC
Q 010917 457 QLLPTLARSQPFVDKAKLQQAS 478 (497)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ 478 (497)
..+++|++++..++++.+.++.
T Consensus 375 ~~~~~~~~~~~~~~~~~l~~~~ 396 (404)
T 3fg2_P 375 VFGRKILPLDKSVTPEQAADLS 396 (404)
T ss_dssp HHHHHHTTTTCCCCHHHHHCTT
T ss_pred HHHHHHHHcCCCCCHHHhcCCC
Confidence 9999999999999988887664
No 3
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=8.6e-59 Score=468.40 Aligned_cols=391 Identities=27% Similarity=0.449 Sum_probs=344.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
+++|||||||+||++||.+|+++|+ +.+|+|||++++.+|++|++++.++..... ...+ ....+++
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~-~~~~------------~~~~~~~ 67 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLE-RPPI------------LAEADWY 67 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSS-SCCB------------SSCTTHH
T ss_pred CCCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCC-HHHh------------cCCHHHH
Confidence 3699999999999999999999998 667999999999999999998765533211 1111 2346788
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeE
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 219 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~v 219 (497)
.+.+++++++++|+.+++..+++.+++++++.||+||+|||+.|+. |.++|.+.++++++++..+...+.+.+..++++
T Consensus 68 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~-~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~v 146 (410)
T 3ef6_A 68 GEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRART-MALPGSQLPGVVTLRTYGDVQVLRDSWTSATRL 146 (410)
T ss_dssp HHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEE
T ss_pred HHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccC-CCCCCccccceEEeccHHHHHHHHHHhccCCeE
Confidence 8999999999999999999999999999999999999999999874 557787788999999999999888877889999
Q ss_pred EEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC
Q 010917 220 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 299 (497)
Q Consensus 220 vVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~ 299 (497)
+|||+|++|+|+|..|.+.|.+|+++++.+.++++.+++++.+.+.+.++++||++++++.|++++.+ +.+..+.+++
T Consensus 147 vViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~d 224 (410)
T 3ef6_A 147 LIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASD 224 (410)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECC
Confidence 99999999999999999999999999999999987789999999999999999999999999999853 3555789999
Q ss_pred CcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHH
Q 010917 300 GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHC 379 (497)
Q Consensus 300 g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~ 379 (497)
|+++++|.||+|+|.+|+++++++++++.+ ++|.||++++|+.|+|||+|||+..+... |...++++|..|..||+.+
T Consensus 225 g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~a 302 (410)
T 3ef6_A 225 GRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAV 302 (410)
T ss_dssp SCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHH
T ss_pred CCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHH
Confidence 999999999999999999999999999987 56999999999999999999999987655 6667788999999999999
Q ss_pred HHHHhcCCCCCCCCCCceeeeccccCCCCcceeeEEeecCCC--cEEEEccCC-CcEEEEEEECCEEEEEEeecCChHHh
Q 010917 380 IKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEEF 456 (497)
Q Consensus 380 a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 456 (497)
|.+|++. ..+|..+||||+++|+.. ++++|...+ +.+.+++.+ ..|.++|+++|+|+|+++ .|++.+.
T Consensus 303 a~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~~ 373 (410)
T 3ef6_A 303 AAAILGK-NVSAPQLPVSWTEIAGHR-------MQMAGDIEGPGDFVSRGMPGSGAALLFRLQERRIQAVVA-VDAPRDF 373 (410)
T ss_dssp HHHHTTC-CCCCCBCCEEEEEETTEE-------EEEESCSSSSSEEEEESCTTSSSEEEEEEETTEEEEEEE-ESCHHHH
T ss_pred HHHHcCC-CCCCCCCCeeEEEECCce-------EEEEcCCCCCCEEEEEeeCCCCeEEEEEEECCEEEEEEE-ECChHHH
Confidence 9999974 468999999999999865 888997653 567777765 679999999999999996 8999999
Q ss_pred hHHHHHHhCCCCCChhhhcCCC
Q 010917 457 QLLPTLARSQPFVDKAKLQQAS 478 (497)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~ 478 (497)
..+++|++++..++++.+.|+.
T Consensus 374 ~~~~~~i~~~~~~~~~~l~~~~ 395 (410)
T 3ef6_A 374 ALATRLVEARAAIEPARLADLS 395 (410)
T ss_dssp HHHHHHHHHTCBCCHHHHHCTT
T ss_pred HHHHHHHhCCCCCCHHHhcCCC
Confidence 9999999999999988886654
No 4
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.3e-54 Score=440.33 Aligned_cols=403 Identities=29% Similarity=0.477 Sum_probs=340.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
+++||+|||||+||++||..|++.|+ +.+|+|||+++..+|.++++++.++.... ....+ .....++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~-~~~~~-----------~~~~~~~ 69 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGKA-TAESL-----------YLRTPDA 69 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTCS-CSGGG-----------BSSCHHH
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCCC-ChHHh-----------cccCHHH
Confidence 35799999999999999999999997 56899999999999998888775553211 11111 1245678
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCc---EEEecCHHHHHHHHHhhcc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG---VHYIRDVADADALISSLEK 215 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~g---v~~~~~~~~~~~~~~~~~~ 215 (497)
+++.+++++.+++|+.++.+.++|.+++|+++.||+||+|||+.|.. |.++|.+.++ ++++++..+...+.+.+..
T Consensus 70 ~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~-~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~ 148 (431)
T 1q1r_A 70 YAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRP-LPVASGAVGKANNFRYLRTLEDAECIRRQLIA 148 (431)
T ss_dssp HHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CGGGTTHHHHSTTEEESSSHHHHHHHHHTCCT
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccC-CCCCCcccCCCceEEEECCHHHHHHHHHHhhc
Confidence 88999999999999999998899999999899999999999999874 5566765556 8888888888888877778
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeC-CCCcEEE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG-SDGRVAA 294 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~-~~~~v~~ 294 (497)
+++++|||+|++|+|+|..|.+.|.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|++++.. +++.+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~ 228 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTA 228 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEE
Confidence 999999999999999999999999999999999999887789999999999999999999999999999852 3466667
Q ss_pred EEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHH
Q 010917 295 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQ 374 (497)
Q Consensus 295 v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~ 374 (497)
+.+.+|+++++|.||+|+|++|+++++++++++.+ ++|.||++++|+.|+|||+|||+..+....|...++++|..|..
T Consensus 229 v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 307 (431)
T 1q1r_A 229 VLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALE 307 (431)
T ss_dssp EEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHH
T ss_pred EEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CCEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHH
Confidence 88999999999999999999999999999999887 46999999999999999999999987666676667789999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCceeeeccccCCCCcceeeEEeecCCC--cEEEEccCC-CcEEEEEEECCEEEEEEeecC
Q 010917 375 SAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESG 451 (497)
Q Consensus 375 ~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 451 (497)
||+.+|.||++. ..+|..+|++|+++|+.. ++.+|.... +....++.+ ..|.++|.++|+|+|+++ .|
T Consensus 308 qg~~aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g 378 (431)
T 1q1r_A 308 QARKIAAILCGK-VPRDEAAPWFWSDQYEIG-------LKMVGLSEGYDRIIVRGSLAQPDFSVFYLQGDRVLAVDT-VN 378 (431)
T ss_dssp HHHHHHHHHTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCSEEEEEEETTTTEEEEEEEETTEEEEEEE-ES
T ss_pred HHHHHHHHhcCC-CCCCCCCCeEEEEECCce-------EEEEeCCCCCCEEEEEccCCCCeEEEEEEeCCEEEEEEE-EC
Confidence 999999999964 457888999999998754 778886543 455566654 458888989999999996 78
Q ss_pred ChHHhhHHHHHHhCCCCCChhhhcCCC-cHHHHHH
Q 010917 452 SPEEFQLLPTLARSQPFVDKAKLQQAS-SVEEALE 485 (497)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 485 (497)
+......++.++..+..++...+.++. .+.+.++
T Consensus 379 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~ 413 (431)
T 1q1r_A 379 RPVEFNQSKQIITDRLPVEPNLLGDESVPLKEIIA 413 (431)
T ss_dssp CHHHHHHHHHHHHTTCCCCHHHHTCTTSCHHHHHH
T ss_pred ChHHHHHHHHHHHCCCCCCHHHhhCCCCCHHHHHH
Confidence 888888899999999999988776554 3444443
No 5
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=6e-56 Score=442.39 Aligned_cols=374 Identities=21% Similarity=0.301 Sum_probs=318.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 137 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (497)
.++.||||||||+||++||..|+..+ .+|+|||++++.+|.+|++++. +... ....++ .....+
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~---~~itlie~~~~~~y~~~~l~~~-l~g~-~~~~~l-----------~~~~~~ 70 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKC---DDITMINSEKYLPYYRPRLNEI-IAKN-KSIDDI-----------LIKKND 70 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTC---SCEEEECSSSSCCBCGGGHHHH-HHSC-CCGGGT-----------BSSCHH
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCC---CEEEEEECCCCCCcccChhhHH-HcCC-CCHHHc-----------cCCCHH
Confidence 44679999999999999999995444 4899999999999999988863 3221 112222 346788
Q ss_pred HHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCC
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 217 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~ 217 (497)
++++.+++++++++|+.+|++.+++++++|+++.||+||||||+.|+. |.++|.+ +++++++..+...+.+.+..++
T Consensus 71 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~-p~i~G~~--~v~~~~~~~d~~~l~~~l~~~~ 147 (385)
T 3klj_A 71 WYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANK-IKVPHAD--EIFSLYSYDDALKIKDECKNKG 147 (385)
T ss_dssp HHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CCCTTCS--CEECCSSHHHHHHHHHHHHHHS
T ss_pred HHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCC-CCCCCCC--CeEEeCCHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999874 5567755 8899999999988888777789
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 297 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~ 297 (497)
+|+|||+|++|+|+|..|++.|.+||++++.+.++++.+++++.+.+.+.+++.||++++++.++++
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------- 214 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------- 214 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------
Confidence 9999999999999999999999999999999999988789999999999999999999999887665
Q ss_pred CCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHH
Q 010917 298 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 377 (497)
Q Consensus 298 ~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 377 (497)
|+++++|.||+|+|++|++++++++++..+ ++|.||++++|+.|+|||+|||+..+... ..+|..|..||+
T Consensus 215 --g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~ 285 (385)
T 3klj_A 215 --GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RGILVNDHMETSIKDIYACGDVAEFYGKN------PGLINIANKQGE 285 (385)
T ss_dssp --HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SSEEECTTCBCSSTTEEECGGGEEETTBC------CCCHHHHHHHHH
T ss_pred --CeEEecCeEEECcCcccChhhhhhcCCCcC-CCEEECCCcccCCCCEEEEEeeEecCCCc------ccHHHHHHHHHH
Confidence 567999999999999999999999999887 45999999999999999999999876532 237888999999
Q ss_pred HHHHHHhcCCCCCCCC-CCceeeeccccCCCCcceeeEEeecCCC---cEEEEccCCCcEEEEEEECCEEEEEEeecCCh
Q 010917 378 HCIKALLSAQTHTYDY-LPYFYSRVFEYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWIDSGKLKGVLVESGSP 453 (497)
Q Consensus 378 ~~a~~i~~~~~~~~~~-~p~~~~~~~~~~g~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 453 (497)
.+|.+|++. ..+|.. +|++|+++|+.. ++++|...+ +.+.+...+..|.++|+++|+|+|+++ .|+.
T Consensus 286 ~aa~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~g~~ 356 (385)
T 3klj_A 286 VAGLNACGE-DASYSEIIPSPILKVSGIS-------IISCGDIENNKPSKVFRSTQEDKYIVCMLKENKIDAAAV-IGDV 356 (385)
T ss_dssp HHHHHHTTC-CCCCCCCCCCCEEEETTEE-------EEEESCCTTCCCSEEEEEECSSCEEEEEEETTEEEEEEE-ESCH
T ss_pred HHHHHhcCC-CcCCCCCCCcEEEEeCCCc-------EEEEcCCCCCCCeEEEEECCCCeEEEEEEECCEEEEEEE-ECCc
Confidence 999999974 456766 699999999865 888887653 334442224679999999999999996 7888
Q ss_pred HHhhHHHHHHhCCCCCChhhhcCCCcHHHHHHH
Q 010917 454 EEFQLLPTLARSQPFVDKAKLQQASSVEEALEI 486 (497)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (497)
.....++++++++.+++.- +|++|.++.
T Consensus 357 ~~~~~~~~~i~~~~~~~~~-----~~~~E~~~~ 384 (385)
T 3klj_A 357 SLGTKLKKAIDSSKSFDNI-----SSLDAILNN 384 (385)
T ss_dssp HHHHHHHHHHHTTCBCSCC-----SCHHHHHTT
T ss_pred HHHHHHHHHHHcCCCcccc-----cCHHHHHhh
Confidence 8888999999999877643 899998863
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.1e-54 Score=438.01 Aligned_cols=392 Identities=26% Similarity=0.401 Sum_probs=330.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
+++||+|||||+||++||..|++.|+ +.+|+|||+++..+|.++++++.++.... ..++ .+. +
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~-------------~~~-~ 68 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGD--AEKI-------------RLD-C 68 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCC--GGGS-------------BCC-C
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCc--hhhh-------------hHH-H
Confidence 45799999999999999999999997 56799999999999998887765543211 1111 011 4
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCC-CCCCCCcEEEecCHHHHHHHHHhhccCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEK-IGGYLPGVHYIRDVADADALISSLEKAK 217 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~-~g~~~~gv~~~~~~~~~~~~~~~~~~~~ 217 (497)
+++.+++++.+++|+.++.+.+++.+++++.+.||+||+|||+.|.. |.+ +|.+ ++++++++..+...+.+.+..++
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~-~~i~~G~~-~~v~~~~~~~~~~~l~~~~~~~~ 146 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRA-LPTLQGAT-MPVHTLRTLEDARRIQAGLRPQS 146 (408)
T ss_dssp TTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CGGGTTCS-SCEEECCSHHHHHHHHTTCCTTC
T ss_pred HHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCC-CCccCCCC-CcEEEECCHHHHHHHHHHhhcCC
Confidence 56789999999889999999999999999899999999999999874 555 7765 78988888888888877777789
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 297 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~ 297 (497)
+++|||+|++|+|+|..|++.|.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|++++ + + .+++
T Consensus 147 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~ 220 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLL 220 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEE
Confidence 99999999999999999999999999999999999877899999999999999999999999999998 3 2 5778
Q ss_pred CCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHH
Q 010917 298 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 377 (497)
Q Consensus 298 ~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 377 (497)
.+|+++++|.||+|+|++|+++++++++++.++ +|.||++++|+.|+|||+|||+..+....|...+.++|..|..||+
T Consensus 221 ~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~ 299 (408)
T 2gqw_A 221 DDGTRIAADMVVVGIGVLANDALARAAGLACDD-GIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGI 299 (408)
T ss_dssp TTSCEEECSEEEECSCEEECCHHHHHHTCCBSS-SEECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHH
T ss_pred CCCCEEEcCEEEECcCCCccHHHHHhCCCCCCC-CEEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHH
Confidence 899999999999999999999999999998874 5999999999999999999999987655566666778999999999
Q ss_pred HHHHHHhcCCCCCCCCCCceeeeccccCCCCcceeeEEeec-CCCcEEEEccCC---CcEEEEEEECCEEEEEEeecCCh
Q 010917 378 HCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGD-NVGETIEIGNFD---PKIATFWIDSGKLKGVLVESGSP 453 (497)
Q Consensus 378 ~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~-~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~ 453 (497)
.+|.||++....+|..+|++|+++|+.. ++++|. ..++....++.. ..|.++|.++|+|+|+++ .++.
T Consensus 300 ~aa~~i~g~~~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g~~ 371 (408)
T 2gqw_A 300 AVARHLVDPTAPGYAELPWYWSDQGALR-------IQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATC-VNNA 371 (408)
T ss_dssp HHHHHHHCTTSCCCCCCCEEEEEETTEE-------EEEEECSCCSEEEEESCCCSSSCCEEEEEEETTEEEEEEE-ESCH
T ss_pred HHHHHhcCCCCCcCCCCCeEEEEECCce-------EEEECCCCCCEEEEEccCCCCCCeEEEEEEeCCEEEEEEE-ECCh
Confidence 9999999643227888999999999864 778886 223455566653 568899999999999996 7777
Q ss_pred HHhhHHHHHHhCCCCCChhhhcCCC-cHHHHH
Q 010917 454 EEFQLLPTLARSQPFVDKAKLQQAS-SVEEAL 484 (497)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 484 (497)
.....++.+++++.+++...+.++. .+.+.+
T Consensus 372 ~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~ 403 (408)
T 2gqw_A 372 RDFAPLRRLLAVGAKPDRAALADPATDLRKLA 403 (408)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHCTTCCHHHHH
T ss_pred HHHHHHHHHHHCCCCCChHHhcCCCCCHHHHh
Confidence 8888999999999999988776654 344433
No 7
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=7.7e-52 Score=426.61 Aligned_cols=406 Identities=22% Similarity=0.344 Sum_probs=309.7
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCC------CCCCCcc---cc
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPA------RLPGFHT---CV 127 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~------~~~~~~~---~~ 127 (497)
++..++|||||||+||++||..|++.++ ..+|+|||++++.+|.+|++++.++........ .+++... +.
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQ 86 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhccccccccccccccccc
Confidence 3456799999999999999999999854 559999999999999999888766543221000 0000000 00
Q ss_pred CCCCCCCCHh--HHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCC----CCcEEEec
Q 010917 128 GSGGERQTPE--WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIR 201 (497)
Q Consensus 128 ~~~~~~~~~~--~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~----~~gv~~~~ 201 (497)
.......... .+.+.+++++++++|+.++++.++|.+++|+++.||+||||||++|+.+| .++.. .+++++++
T Consensus 87 ~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~-~~~~~~~~~~~~v~~~~ 165 (493)
T 1m6i_A 87 PPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLS-AIDRAGAEVKSRTTLFR 165 (493)
T ss_dssp CGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCH-HHHTSCHHHHHTEEECC
T ss_pred chHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC-CcccccccccCceEEEc
Confidence 0000000000 11356899999999999999999999999999999999999999987543 23321 35788888
Q ss_pred CHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHh----CCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEc
Q 010917 202 DVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVG----WKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 277 (497)
Q Consensus 202 ~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~----~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~ 277 (497)
+..++..+...+..+++++|||+|++|+|+|..|++ .|.+|+++++.+.++.+.+++.+.+.+.+.++++||++++
T Consensus 166 ~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~ 245 (493)
T 1m6i_A 166 KIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMP 245 (493)
T ss_dssp SHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEEC
T ss_pred CHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEe
Confidence 888888887777789999999999999999999987 5788999999888887778899999999999999999999
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc--CCCEEecCCCCCCCCcEEEecccccc
Q 010917 278 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS--VGGIQVDGQFRTRMPGIFAIGDVAAF 355 (497)
Q Consensus 278 ~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~--~g~i~vd~~~~t~~~~iya~GD~~~~ 355 (497)
++.|++++.. ++.+ .+.+.+|+++++|.||+|+|.+||++++++++++.+ +|+|.||+++|| .|+|||+|||+..
T Consensus 246 ~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~ 322 (493)
T 1m6i_A 246 NAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAACF 322 (493)
T ss_dssp SCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGEEE
T ss_pred CCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeEec
Confidence 9999999853 3333 688899999999999999999999999999998876 379999999998 6999999999987
Q ss_pred CCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeeccccCCCCc----ceeeEEeecCCC-----c----
Q 010917 356 PLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPR----KVWWQFFGDNVG-----E---- 422 (497)
Q Consensus 356 ~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~----~~~~~~~g~~~~-----~---- 422 (497)
+....|.. ++++|.+|..||+.+|.||++ ...+|...||||++++...+... ...++++|.... .
T Consensus 323 ~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g-~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~~~ 400 (493)
T 1m6i_A 323 YDIKLGRR-RVEHHDHAVVSGRLAGENMTG-AAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSA 400 (493)
T ss_dssp EETTTEEE-CCCCHHHHHHHHHHHHHHHTS-CCCCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHHHH
T ss_pred cCcccCcc-ccchHHHHHHHHHHHHHHhcC-CCCCcCCcCceeeeeccCcceEEEeccCCCcceEEeecccccccccccc
Confidence 76554543 577999999999999999996 45789999999999983211000 001333332100 0
Q ss_pred --------------------EEEE----c-------c-CCCcEEEEEEECCEEEEEEeecCChHHhhHHHHHHhCCCCCC
Q 010917 423 --------------------TIEI----G-------N-FDPKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPFVD 470 (497)
Q Consensus 423 --------------------~~~~----~-------~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (497)
.... | + ...+|.+||+++|+|+|+++ .|+++.+..+++|++.+..++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~li~~~~~~~ 479 (493)
T 1m6i_A 401 TEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVL-WNIFNRMPIARKIIKDGEQHE 479 (493)
T ss_dssp HHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEE-ESCCSCHHHHHHHHHHCCBCS
T ss_pred cccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEE-ecCcchHHHHHHHHhCCCCCC
Confidence 0000 1 1 12567889999999999996 899999999999998887665
No 8
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=6e-50 Score=406.31 Aligned_cols=393 Identities=20% Similarity=0.282 Sum_probs=303.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 140 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (497)
+|||||||||||++||..|++.|. +.+|+|||++++.+|.++.++. ++.......... .......+++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~----------~~~~~~~~~~ 68 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPY-VIGEVVEDRRYA----------LAYTPEKFYD 68 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHH-HHTTSSCCGGGT----------BCCCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHH-HHcCCccchhhh----------hhcCHHHHHH
Confidence 479999999999999999999996 6789999999999898876653 111111111000 0123456788
Q ss_pred HcCcEEEeCCcEEEEecCCCEEEECCC-----cEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhh--
Q 010917 141 EKGIEMIYQDPVTSIDIEKQTLITNSG-----KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL-- 213 (497)
Q Consensus 141 ~~~v~~~~~~~v~~i~~~~~~v~~~~g-----~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~-- 213 (497)
+.+++++.+++|+.+|.+.+.+.+.++ .++.||+||||||++|+. |.++ .++++.++++.++..+.+.+
T Consensus 69 ~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~-p~i~---g~~~~~~~~~~~~~~l~~~~~~ 144 (437)
T 4eqs_A 69 RKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS-LGFE---SDITFTLRNLEDTDAIDQFIKA 144 (437)
T ss_dssp HHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECC-CCCC---CTTEECCSSHHHHHHHHHHHHH
T ss_pred hcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccc-cccc---CceEEeeccHHHHHHHHHhhhc
Confidence 899999999999999999988766432 368999999999999874 4333 35678888888887776654
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEE
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 293 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~ 293 (497)
..+++++|||+|++|+|+|..++++|.+||++++.+++++. +++++.+.+.+.++++||+++++++|++++..
T Consensus 145 ~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~------ 217 (437)
T 4eqs_A 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYRLNEEINAINGN------ 217 (437)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHHTTCCEEESCCEEEEETT------
T ss_pred cCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhccceEEEeccEEEEecCC------
Confidence 35789999999999999999999999999999999999975 79999999999999999999999999999743
Q ss_pred EEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHH
Q 010917 294 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 372 (497)
Q Consensus 294 ~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A 372 (497)
.+.+++|+++++|.|++|+|++||+++++.+|++.+ +|+|.||+++||++|||||+|||+..+....+.....+.+..|
T Consensus 218 ~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A 297 (437)
T 4eqs_A 218 EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGA 297 (437)
T ss_dssp EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHH
T ss_pred eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHH
Confidence 578899999999999999999999999999999876 5779999999999999999999999888777777777788899
Q ss_pred HHHHHHHHHHHhcCCCCCCC-CCCceeeeccccCCCCcceeeEEeecCCCc-------EEE--Ecc---C----CCcEEE
Q 010917 373 RQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE--IGN---F----DPKIAT 435 (497)
Q Consensus 373 ~~~g~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~~--~~~---~----~~~~~~ 435 (497)
.+||+.+|+||++.....+. ..+..+...++.. +..+|....+ ... ... . ...+.|
T Consensus 298 ~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~-------ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~K 370 (437)
T 4eqs_A 298 HRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYT-------FASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLR 370 (437)
T ss_dssp HHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEE-------EEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEE
T ss_pred HHHHHHHHHHHcCCCCcccccceeEEeeeeccce-------EEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEE
Confidence 99999999999986544432 3333333333322 5556654321 111 111 0 123667
Q ss_pred EEEE--CCEEEEEEeecCC-hHHhh-HHHHHHhCCCCCC-hhh--hcCCCcHHHH
Q 010917 436 FWID--SGKLKGVLVESGS-PEEFQ-LLPTLARSQPFVD-KAK--LQQASSVEEA 483 (497)
Q Consensus 436 ~~~~--~~~~~g~~~~~~~-~~~~~-~~~~~~~~~~~~~-~~~--~~~~~~~~~~ 483 (497)
+.++ +++|+|+++++.+ ++++. .+..+|+++.+++ ... +..||+++++
T Consensus 371 li~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~ 425 (437)
T 4eqs_A 371 VYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHP 425 (437)
T ss_dssp EEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCS
T ss_pred EEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCch
Confidence 7765 4899999986654 66655 4456688998886 333 3557888765
No 9
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.3e-49 Score=410.44 Aligned_cols=425 Identities=17% Similarity=0.253 Sum_probs=319.6
Q ss_pred CchhhhcccccccccccCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCC
Q 010917 40 SAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPAR 119 (497)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~ 119 (497)
..++.++|+......+ .++++||+|||||+||++||..|++.|.+..+|+|||+++..+|....+.. ++......+.+
T Consensus 16 ~~~~~~~~~~~~~m~~-~~m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~ 93 (490)
T 2bc0_A 16 TGGQQMGRTLYDDDDK-DRWGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGEQIAGPEG 93 (490)
T ss_dssp --CCCCSCCTTCCCCT-TCCCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTTSSSCSGG
T ss_pred cchhhhccccccccch-hccCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcCccCCHHH
Confidence 3444455444332211 223589999999999999999999987113389999999876654322110 11111011111
Q ss_pred CCCCccccCCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEEC-CC--cEEEeccEEeccCCCCCcCCCCCCCC---
Q 010917 120 LPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SG--KLLKYGSLIVATGCTASRFPEKIGGY--- 193 (497)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~g--~~i~~d~lvlAtG~~~~~~~~~~g~~--- 193 (497)
+ .....+++++.+++++.+++|+.++.+.+.+.+. ++ .++.||+||+|||+.|. .|.++|.+
T Consensus 94 ~-----------~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~ 161 (490)
T 2bc0_A 94 L-----------FYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPI-LPPIKGAEIKE 161 (490)
T ss_dssp G-----------BSCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEEC-CCSCBTCCBCT
T ss_pred h-----------hhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcC-CCCCCCccccc
Confidence 1 1345677888999999999999999988888876 54 47999999999999987 45677766
Q ss_pred --------CCcEEEecCHHHHHHHHHhh--ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHH
Q 010917 194 --------LPGVHYIRDVADADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 263 (497)
Q Consensus 194 --------~~gv~~~~~~~~~~~~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~ 263 (497)
.+++++++++.+++.+.+.. ..+++++|||+|++|+|+|..|++.|.+|+++++.+.++++.+++++.+.
T Consensus 162 ~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~ 241 (490)
T 2bc0_A 162 GSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDL 241 (490)
T ss_dssp TCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHH
T ss_pred cccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHH
Confidence 57899999999998888877 67899999999999999999999999999999999999986789999999
Q ss_pred HHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCC
Q 010917 264 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTR 342 (497)
Q Consensus 264 ~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~ 342 (497)
+.+.+++.||+++++++|++++. ++.+..+.+ +|+++++|.||+|+|++|+++++++. ++.+ +|+|.||+++||+
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t~ 317 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQETS 317 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBCS
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCCcccC
Confidence 99999999999999999999984 444434555 67889999999999999999988877 7664 5779999999999
Q ss_pred CCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCC-CCCCceeeeccccCCCCcceeeEEeecCCC
Q 010917 343 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 421 (497)
Q Consensus 343 ~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~-~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~ 421 (497)
.|+|||+|||+..+....+....+..+..|..||+.+|.||++.. .++ ...|++|+.+|+.. +..+|....
T Consensus 318 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~ 389 (490)
T 2bc0_A 318 IPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD-LEGIGVQGSNGISIYGLH-------MVSTGLTLE 389 (490)
T ss_dssp STTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHH
T ss_pred CCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC-CCCCCcccceEEEECCcE-------eEEeeCCHH
Confidence 999999999998765555554455688899999999999999643 333 34678888888643 667776532
Q ss_pred -------cEEE-------EccC-----CCcEEEEEEE--CCEEEEEEeecC-ChHH-hhHHHHHHhCCCCCC-hhh--hc
Q 010917 422 -------ETIE-------IGNF-----DPKIATFWID--SGKLKGVLVESG-SPEE-FQLLPTLARSQPFVD-KAK--LQ 475 (497)
Q Consensus 422 -------~~~~-------~~~~-----~~~~~~~~~~--~~~~~g~~~~~~-~~~~-~~~~~~~~~~~~~~~-~~~--~~ 475 (497)
.+.. +..+ ...+.+++++ +++|+|+++++. ++.+ +..+..+++.+.+++ ... +.
T Consensus 390 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~ 469 (490)
T 2bc0_A 390 KAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIF 469 (490)
T ss_dssp HHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCC
T ss_pred HHHHcCCceEEEEEecCCcccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhccee
Confidence 1111 1111 1236677664 489999998666 4554 456677889898886 332 57
Q ss_pred CCCcHHHHHHHHHcc
Q 010917 476 QASSVEEALEIARAA 490 (497)
Q Consensus 476 ~~~~~~~~~~~~~~~ 490 (497)
.||+++|++..+..+
T Consensus 470 ~~Pt~~e~~~~~~~~ 484 (490)
T 2bc0_A 470 FLPHFNKPYNYITMA 484 (490)
T ss_dssp CCTTTCCTTCHHHHH
T ss_pred cCCCCCchhHHHHHH
Confidence 899999876655443
No 10
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.4e-49 Score=406.51 Aligned_cols=403 Identities=20% Similarity=0.263 Sum_probs=312.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCC--CCCCCCCCccccCCCCCCCCHhH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDK--KPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
+||+|||||+||++||..|++.+. ..+|+|||+++..+|....+.. ++..... .+..+ .....++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----------~~~~~~~ 67 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHP-DADVTAYEMNDNISFLSCGIAL-YLGKEIKNNDPRGL-----------FYSSPEE 67 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TCEEEEEESSSCCCBCGGGHHH-HHTTCBGGGCGGGG-----------BSCCHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCCcccccchh-hhcCCcccCCHHHh-----------hhcCHHH
Confidence 489999999999999999999832 3389999999876664332211 1111000 01111 2345677
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEECC-----CcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhh
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 213 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~-----g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 213 (497)
+++.+++++.+++|..++.+.+++.+.+ +..+.||+||+|||+.|. .|.++|.+.+++++++++.++..+.+..
T Consensus 68 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~ 146 (452)
T 2cdu_A 68 LSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT-VPPIPGIDSSRVYLCKNYNDAKKLFEEA 146 (452)
T ss_dssp HHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTTTSTTEEECSSHHHHHHHHHHG
T ss_pred HHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC-CCCCCCCCCCCEEEeCcHHHHHHHHHHh
Confidence 8889999999989999998888887754 467999999999999987 4566777667899999999998888888
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEE
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 293 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~ 293 (497)
..+++++|||+|++|+|+|..|+++|.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|++++.. ++++.
T Consensus 147 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~ 225 (452)
T 2cdu_A 147 PKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEII 225 (452)
T ss_dssp GGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEE
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEE
Confidence 88999999999999999999999999999999999999986789999999999999999999999999999853 45554
Q ss_pred EEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHH
Q 010917 294 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 372 (497)
Q Consensus 294 ~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A 372 (497)
.+.+ +|+++++|.||+|+|++|+++++++. ++.+ +|+|.||+++||+.|+|||+|||+..+....|...+..++..|
T Consensus 226 ~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 303 (452)
T 2cdu_A 226 TKTL-DGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNA 303 (452)
T ss_dssp EEET-TSCEEEESEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHH
T ss_pred EEEe-CCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHH
Confidence 5555 78899999999999999999988877 7764 5779999999999999999999999766555554455688899
Q ss_pred HHHHHHHHHHHhcCCCCCC-CCCCceeeeccccCCCCcceeeEEeecCCCc-------EE---EE--cc------CCCcE
Q 010917 373 RQSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI---EI--GN------FDPKI 433 (497)
Q Consensus 373 ~~~g~~~a~~i~~~~~~~~-~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~---~~--~~------~~~~~ 433 (497)
..||+.+|.||++.. .++ ...|++|+.+|+.. +..+|....+ .. .. +. ....+
T Consensus 304 ~~~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (452)
T 2cdu_A 304 VRQGRLVGLNLTEDK-VKDMGTQSSSGLKLYGRT-------YVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVL 375 (452)
T ss_dssp HHHHHHHHHTSSSCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEE
T ss_pred HHHHHHHHHHhCCCC-CcCCCccceEEEEECCee-------eEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEE
Confidence 999999999999643 334 34678899888653 6677765321 11 10 11 11236
Q ss_pred EEEEEE--CCEEEEEEeecC-ChHHh-hHHHHHHhCCCCCCh-hh--hcCCCcHHHHHHHHH
Q 010917 434 ATFWID--SGKLKGVLVESG-SPEEF-QLLPTLARSQPFVDK-AK--LQQASSVEEALEIAR 488 (497)
Q Consensus 434 ~~~~~~--~~~~~g~~~~~~-~~~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~ 488 (497)
.+++++ +++|+|+++++. ++.++ ..+..+++.+.+++. .. ++.|||++|++..+.
T Consensus 376 ~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~ 437 (452)
T 2cdu_A 376 MSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFNYLN 437 (452)
T ss_dssp EEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSCHHH
T ss_pred EEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHHHHH
Confidence 677764 589999998766 45554 456778888888763 32 577999998755443
No 11
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.5e-49 Score=388.62 Aligned_cols=354 Identities=23% Similarity=0.400 Sum_probs=281.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
..||+|||||+||++||..|++.| +|+|||+++..+|.++.+++ ++... .....+ .....+++
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g----~V~lie~~~~~~~~~~~l~~-~~~g~-~~~~~~-----------~~~~~~~~ 70 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY----EVTVIDKEPVPYYSKPMLSH-YIAGF-IPRNRL-----------FPYSLDWY 70 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS----EEEEECSSSSCCCCSTTHHH-HHTTS-SCGGGG-----------CSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC----CEEEEECCCCCccccchhHH-HHhCC-CCHHHh-----------ccCCHHHH
Confidence 469999999999999999998875 89999999988888776654 22211 111111 23467888
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeE
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 219 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~v 219 (497)
++.+++++++++|+.+++..++|. .+++++.||+||||||++|.. |.++| .++++++++..+...+.+.+.+++++
T Consensus 71 ~~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~-p~i~G--~~~v~~~~~~~~~~~l~~~~~~~~~v 146 (367)
T 1xhc_A 71 RKRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARARE-PQIKG--KEYLLTLRTIFDADRIKESIENSGEA 146 (367)
T ss_dssp HHHTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEECC-CCSBT--GGGEECCCSHHHHHHHHHHHHHHSEE
T ss_pred HhCCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCCC-CCCCC--cCCEEEEcCHHHHHHHHHHhhcCCcE
Confidence 899999999989999999988888 777889999999999999874 55666 56788888888888877766667999
Q ss_pred EEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC
Q 010917 220 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 299 (497)
Q Consensus 220 vVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~ 299 (497)
+|||+|++|+|+|..|+++|.+|+++++.+.+++ +++++.+.+.+.+++.||+++++++|++++.. .+.+++
T Consensus 147 vViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~------~v~~~~ 218 (367)
T 1xhc_A 147 IIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEANEE------GVLTNS 218 (367)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEECSS------EEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEee------EEEECC
Confidence 9999999999999999999999999999999887 89999999999999999999999999999721 477888
Q ss_pred CcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHH
Q 010917 300 GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHC 379 (497)
Q Consensus 300 g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~ 379 (497)
|+ +++|.||+|+|++|+++++++++++.+ ++|.||+++||+.|+|||+|||+...... ...+..|..||+.+
T Consensus 219 g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~~a 290 (367)
T 1xhc_A 219 GF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEYSGII------AGTAKAAMEQARVL 290 (367)
T ss_dssp EE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEBTTBC------CCSHHHHHHHHHHH
T ss_pred CE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeEeeeecCCCC------ccHHHHHHHHHHHH
Confidence 88 999999999999999999999999887 56999999999999999999999764321 12677899999999
Q ss_pred HHHHhcCCCCCCCCCCceee-eccccCCCCcceeeEEeecCCCcEEEEccCCCcEEEEEEECCEEEEEEeecCChHHhhH
Q 010917 380 IKALLSAQTHTYDYLPYFYS-RVFEYEGSPRKVWWQFFGDNVGETIEIGNFDPKIATFWIDSGKLKGVLVESGSPEEFQL 458 (497)
Q Consensus 380 a~~i~~~~~~~~~~~p~~~~-~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 458 (497)
|.||++. ..+|...+++|+ ..++.. +..+|....+.... ..|.++++++++|+|+++ .+.......
T Consensus 291 a~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~~~~~----~~~~k~~~~~~~ilG~~~-~g~~~~~~~ 357 (367)
T 1xhc_A 291 ADILKGE-PRRYNFKFRSTVFKFGKLQ-------IAIIGNTKGEGKWI----EDNTKVFYENGKIIGAVV-FNDIRKATK 357 (367)
T ss_dssp HHHHTTC-CCCCCSSCCEEEEEETTEE-------EEEEECCSSCEEEE----ETTEEEEC-----CEEEE-ESCHHHHHH
T ss_pred HHHhcCC-CccCCCCCCceEEEECCce-------EEEECCCCCCCccc----ceEEEEEEECCEEEEEEE-ECChHHHHH
Confidence 9999964 456666555543 555433 77788766532211 446788888899999996 777777888
Q ss_pred HHHHH
Q 010917 459 LPTLA 463 (497)
Q Consensus 459 ~~~~~ 463 (497)
+++++
T Consensus 358 ~~~~i 362 (367)
T 1xhc_A 358 LEKEI 362 (367)
T ss_dssp HC---
T ss_pred HHHHH
Confidence 88776
No 12
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=1.8e-48 Score=398.11 Aligned_cols=396 Identities=19% Similarity=0.231 Sum_probs=302.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 140 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (497)
+||+|||||+||++||..|++++. ..+|+|||+++...|.++.+.. ++.........+ .....+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~g~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~ 69 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYP-QAEISLIDKQATVGYLSGGLSA-YFNHTINELHEA-----------RYITEEELR 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCCSSCCC----------------------------CCCCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCcccCccchh-hhcCCCCCHHHh-----------hcCCHHHHH
Confidence 699999999999999999999842 3499999999988776554432 221111111111 234678889
Q ss_pred HcCcEEEeCCcEEEEecCCCEEEEC---CCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCC
Q 010917 141 EKGIEMIYQDPVTSIDIEKQTLITN---SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 217 (497)
Q Consensus 141 ~~~v~~~~~~~v~~i~~~~~~v~~~---~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~ 217 (497)
+.+++++++++|+.++++.+.+.+. ++..+.||+||+|||+.|. .|.++|.+.+++++.+++.++..+.+....++
T Consensus 70 ~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 148 (452)
T 3oc4_A 70 RQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQF-STQIRGSQTEKLLKYKFLSGALAAVPLLENSQ 148 (452)
T ss_dssp HTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBC-CCCCBTTTCTTEEEGGGCC----CCHHHHTCS
T ss_pred HCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCC
Confidence 9999999999999999998888763 5567999999999999987 46677877788888877777777666667789
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 297 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~ 297 (497)
+++|||+|++|+|+|..|.+.|.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|++++.. ++.+ .+.+
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~ 226 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLET 226 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEE
Confidence 9999999999999999999999999999999999987789999999999999999999999999999854 4455 6777
Q ss_pred CCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHH
Q 010917 298 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSA 376 (497)
Q Consensus 298 ~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g 376 (497)
+++ ++++|.||+|+|++|++++++.. +..+ +|+|.||+++||+.|+|||+|||+..+....+.......+..|..||
T Consensus 227 ~~g-~i~aD~Vv~A~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g 304 (452)
T 3oc4_A 227 SEQ-EISCDSGIFALNLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTG 304 (452)
T ss_dssp SSC-EEEESEEEECSCCBCCCSSCCTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHH
T ss_pred CCC-EEEeCEEEECcCCCCChHHHHhh-hccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHH
Confidence 777 89999999999999999988654 5554 67899999999999999999999997765555544455788899999
Q ss_pred HHHHHHHhcCCCCCCC-CCCceeeeccccCCCCcceeeEEeecCCCc-------E--EEE---c----cCCCcEEEEEEE
Q 010917 377 QHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T--IEI---G----NFDPKIATFWID 439 (497)
Q Consensus 377 ~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~--~~~---~----~~~~~~~~~~~~ 439 (497)
+.+|.||++.. ..+. ..+..++.+|+.. +..+|....+ . ... . +....+.|+.++
T Consensus 305 ~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~ 376 (452)
T 3oc4_A 305 LVVANNLEEKT-HRFIGSLRTMGTKVGDYY-------LASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYD 376 (452)
T ss_dssp HHHTTSSSSCC-CCCCCCCCCEEEEETTEE-------EEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEE
T ss_pred HHHHHHhcCCC-ccCCCccccEEEEEcCee-------EEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEE
Confidence 99999999743 3343 3445667777643 6667765431 1 110 0 012347788776
Q ss_pred C--CEEEEEEeecC-ChHH-hhHHHHHHhCCCCCC-hhh--hcCCCcHHH
Q 010917 440 S--GKLKGVLVESG-SPEE-FQLLPTLARSQPFVD-KAK--LQQASSVEE 482 (497)
Q Consensus 440 ~--~~~~g~~~~~~-~~~~-~~~~~~~~~~~~~~~-~~~--~~~~~~~~~ 482 (497)
. ++|+|+++++. ++.+ +..+..+++.+.+++ ... +..||+++|
T Consensus 377 ~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~ 426 (452)
T 3oc4_A 377 KVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTN 426 (452)
T ss_dssp TTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSC
T ss_pred CCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCC
Confidence 4 89999998776 4555 445667789998886 332 468888888
No 13
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.1e-48 Score=402.01 Aligned_cols=411 Identities=22% Similarity=0.320 Sum_probs=290.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
++||+|||||+||++||..|++++. ..+|+|||+++..+|.++.++. ++.........+.... .. .....+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~-g~~Vtvie~~~~~~~~~~gl~~-~~~g~~~~~~~~~~~~----~~-~~~~~~~~ 75 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDP-EAHVTMIDQASRISYGGCGIPY-YVSGEVSNIESLQATP----YN-VVRDPEFF 75 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCT-TSEEEEECCC--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCcccccccccch-hhcCCCCchHHhcccc----ch-hccCHHHH
Confidence 4799999999999999999999942 3499999999998887765543 2211111111110000 00 01223334
Q ss_pred H-HcCcEEEeCCcEEEEecCCCEEEECC---Cc--EEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhh
Q 010917 140 K-EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 213 (497)
Q Consensus 140 ~-~~~v~~~~~~~v~~i~~~~~~v~~~~---g~--~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 213 (497)
. +.+++++++++|+.++++.+.+.+.+ |. .+.||+||+|||+.|. .|.++|.+.++++++++..+...+.+.+
T Consensus 76 ~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~l 154 (472)
T 3iwa_A 76 RINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN-RPPVEGMDLAGVTPVTNLDEAEFVQHAI 154 (472)
T ss_dssp -----CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCSCTTTTSBTEEECCSHHHHHHHHHHC
T ss_pred hhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC-CCCCCCCCCCCEEEeCCHHHHHHHHHHh
Confidence 4 57999999999999999999888765 55 7899999999999887 4667787778888888888888777655
Q ss_pred c--cCCeEEEEcCCHHHHHHHHHHHhC-CCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCC
Q 010917 214 E--KAKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG 290 (497)
Q Consensus 214 ~--~~~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~ 290 (497)
. .+++++|||+|++|+|+|..|.+. |.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|++++.. ++
T Consensus 155 ~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~ 233 (472)
T 3iwa_A 155 SAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NG 233 (472)
T ss_dssp CTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SS
T ss_pred hcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CC
Confidence 3 479999999999999999999999 9999999999999986689999999999999999999999999999863 45
Q ss_pred cEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccH
Q 010917 291 RVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 369 (497)
Q Consensus 291 ~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~ 369 (497)
.+. +.+.+|+++++|.||+|+|++|++++++++|++.+ +|+|.||++++|+.|+|||+|||+..+....|.....+++
T Consensus 234 ~v~-v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~ 312 (472)
T 3iwa_A 234 KVA-RVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLG 312 (472)
T ss_dssp BEE-EEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCT
T ss_pred eEE-EEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecchH
Confidence 543 77889999999999999999999999988999875 6889999999999999999999998777666655555677
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCceeeeccccCCCCcceeeEEeecCCCc-------E--EEEc---------cCCC
Q 010917 370 DHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T--IEIG---------NFDP 431 (497)
Q Consensus 370 ~~A~~~g~~~a~~i~~~~~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~--~~~~---------~~~~ 431 (497)
..|..||+.+|.||++........+|++|+..|+.. +..+|....+ . .... +...
T Consensus 313 ~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~-------~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 385 (472)
T 3iwa_A 313 SMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGS-------ASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTI 385 (472)
T ss_dssp THHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCE-------EEEEECCHHHHHHTTCCEEEEEEEC-----------C
T ss_pred HHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCce-------eEEEECCHHHHHHcCCceEEEEEecCCccCccCCCce
Confidence 789999999999999754433345678888777643 6667765321 1 1100 1113
Q ss_pred cEEEEEEE--CCEEEEEEeecC---ChHH-hhHHHHHHhCCCCCC-hhh-hcCC-CcHHHHHHHH
Q 010917 432 KIATFWID--SGKLKGVLVESG---SPEE-FQLLPTLARSQPFVD-KAK-LQQA-SSVEEALEIA 487 (497)
Q Consensus 432 ~~~~~~~~--~~~~~g~~~~~~---~~~~-~~~~~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~ 487 (497)
.+.|+.++ +++|+|+++++. .+.+ +..+..+++.+.+++ ... .+.+ |+++|++...
T Consensus 386 ~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~ 450 (472)
T 3iwa_A 386 MTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPFASAMDIV 450 (472)
T ss_dssp EEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC--------CCHH
T ss_pred EEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCcccHH
Confidence 46777775 589999998665 2234 445566788888876 333 2343 8998876543
No 14
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.5e-48 Score=393.41 Aligned_cols=398 Identities=21% Similarity=0.265 Sum_probs=303.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
++||+|||||+||++||..|++.+. ..+|+|||+++...|....++. ++... .....+ ..+..+++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~-~~~V~vie~~~~~~~~~~~~p~-~~~~~-~~~~~~-----------~~~~~~~~ 68 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKP-EWDVKVFEATEWVSHAPCGIPY-VVEGL-STPDKL-----------MYYPPEVF 68 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSSCCC-------------------------------------CTH
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCc-CCCEEEEECCCccccCCcCCcc-ccCCC-CCHHHh-----------hhcCHHHH
Confidence 5799999999999999999999853 4499999999877665433322 11111 111111 12233445
Q ss_pred -HHcCcEEEeCCcEEEEecCCCEEEECCC-cEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhc--c
Q 010917 140 -KEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE--K 215 (497)
Q Consensus 140 -~~~~v~~~~~~~v~~i~~~~~~v~~~~g-~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~--~ 215 (497)
++.+++++++++|+.++...+.+.++++ ..+.||+||+|||+.|. .|.++|.+.+++++.++..+...+.+... .
T Consensus 69 ~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~ 147 (449)
T 3kd9_A 69 IKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKYK 147 (449)
T ss_dssp HHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC-CCSCBTTTSTTEECSCSTHHHHHHHHHHSSSC
T ss_pred HHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcC
Confidence 6889999999999999998888888877 48999999999999986 46678877788888888888877777665 7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 295 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v 295 (497)
+++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.+++. |++++++.+.+++.. +.+..+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~v 224 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGE--ERVEKV 224 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECS--SSCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEEE
Confidence 89999999999999999999999999999999999998768999999999999999 999999999999853 233333
Q ss_pred EeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHH
Q 010917 296 KLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQ 374 (497)
Q Consensus 296 ~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~ 374 (497)
+.+++++++|.||+|+|++|++++++.+|++.+ +|+|.||++++|+.|+|||+|||+..+....|.......+..|..
T Consensus 225 -~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~ 303 (449)
T 3kd9_A 225 -VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNK 303 (449)
T ss_dssp -EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHH
T ss_pred -EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHH
Confidence 457788999999999999999999999999876 577999999999999999999999877665565545668889999
Q ss_pred HHHHHHHHHhcCCCCCCC-CCCceeeeccccCCCCcceeeEEeecCCCc-------EE---E--Ecc--C----CCcEEE
Q 010917 375 SAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI---E--IGN--F----DPKIAT 435 (497)
Q Consensus 375 ~g~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~---~--~~~--~----~~~~~~ 435 (497)
||+.+|.||++.. ..+. ..|++|+..++.. +..+|....+ +. + .+. . ...|.|
T Consensus 304 ~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 375 (449)
T 3kd9_A 304 MGYVAGSNIAGKE-LHFPGVLGTAVTKFMDVE-------IGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLK 375 (449)
T ss_dssp HHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEE
T ss_pred HHHHHHHHhcCCC-ccCCCcccceEEEEcCcE-------EEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEE
Confidence 9999999999754 3443 4677888877754 6777765321 11 0 110 0 134778
Q ss_pred EEEEC--CEEEEEEeecCChHHhhH-HHHHHhCCCCCC-hhh--hcCCCcHHHHH
Q 010917 436 FWIDS--GKLKGVLVESGSPEEFQL-LPTLARSQPFVD-KAK--LQQASSVEEAL 484 (497)
Q Consensus 436 ~~~~~--~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~--~~~~~~~~~~~ 484 (497)
+.++. ++|+|+++++..+.++.. +..+++.+.+++ ... +..+|+++|+.
T Consensus 376 li~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~ 430 (449)
T 3kd9_A 376 GVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPVW 430 (449)
T ss_dssp EEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCSS
T ss_pred EEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCch
Confidence 87764 899999987777776554 456678888776 333 35677776654
No 15
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=4.2e-48 Score=395.09 Aligned_cols=404 Identities=20% Similarity=0.278 Sum_probs=308.0
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 140 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (497)
+||+|||||+||++||..|++.+. ..+|+|||+++..+|....+.. ++........++ .....++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~ 67 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHP-DAEIQWYEKGDFISFLSAGMQL-YLEGKVKDVNSV-----------RYMTGEKME 67 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TSEEEEEESSSSSSBCGGGHHH-HHTTSSCCGGGS-----------BSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCc-CCeEEEEECCCccCcccccchh-hhcCccCCHHHh-----------hcCCHHHHH
Confidence 389999999999999999999832 3389999999876654322211 111110111111 234567888
Q ss_pred HcCcEEEeCCcEEEEecCCCEEEECC---Cc--EEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhc-
Q 010917 141 EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE- 214 (497)
Q Consensus 141 ~~~v~~~~~~~v~~i~~~~~~v~~~~---g~--~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~- 214 (497)
+.+++++.+++++.++.+.+.+.+.+ |+ ++.||+||+|||+.|. .|.++|.+.++++++++..+...+.+.+.
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~ 146 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF-ELDIPGKDLDNIYLMRGRQWAIKLKQKTVD 146 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCSTTTTSBSEECCCHHHHHHHHHHHHTC
T ss_pred HCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC-CCCCCCCCCCCeEEECCHHHHHHHHHHhhh
Confidence 89999999999999999888887754 54 4899999999999987 45677776678888888888877777666
Q ss_pred -cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEE
Q 010917 215 -KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 293 (497)
Q Consensus 215 -~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~ 293 (497)
.+++++|||+|++|+|+|..|++.|.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|++++.. +.+.
T Consensus 147 ~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~ 224 (447)
T 1nhp_A 147 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQ 224 (447)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEE
Confidence 7899999999999999999999999999999999998886689999999999999999999999999999853 4443
Q ss_pred EEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHH
Q 010917 294 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 372 (497)
Q Consensus 294 ~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A 372 (497)
.+.+ +++++++|.||+|+|.+|++++++.. ++.+ +|+|.||++++|+.|+|||+|||+..+....|......++..|
T Consensus 225 ~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A 302 (447)
T 1nhp_A 225 KVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNA 302 (447)
T ss_dssp EEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHH
T ss_pred EEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHH
Confidence 4555 56789999999999999999988877 7664 5779999999999999999999998765544544445688899
Q ss_pred HHHHHHHHHHHhcCCCCCCC-CCCceeeeccccCCCCcceeeEEeecCCCc-------EE---EEc--c--C----CCcE
Q 010917 373 RQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI---EIG--N--F----DPKI 433 (497)
Q Consensus 373 ~~~g~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~---~~~--~--~----~~~~ 433 (497)
..||+.+|.||++.. .++. ..|++|+..++.. +..+|....+ .. ... . . ...+
T Consensus 303 ~~qg~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 374 (447)
T 1nhp_A 303 RKQGRFAVKNLEEPV-KPFPGVQGSSGLAVFDYK-------FASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAW 374 (447)
T ss_dssp HHHHHHHHHTSSSCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEE
T ss_pred HHHHHHHHHhhcCCC-CCCCCccccEEEEECCee-------eEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEE
Confidence 999999999999643 3443 4578888877653 6667754321 10 111 0 0 1236
Q ss_pred EEEEEE--CCEEEEEEeecCC-hHH-hhHHHHHHhCCCCCCh-hh--hcCCCcHHHHHHHHHcc
Q 010917 434 ATFWID--SGKLKGVLVESGS-PEE-FQLLPTLARSQPFVDK-AK--LQQASSVEEALEIARAA 490 (497)
Q Consensus 434 ~~~~~~--~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 490 (497)
.+++++ +++|+|+++++.. +.+ +..+..+++.+.+++. .. ++.|||++|++..+..+
T Consensus 375 ~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~a 438 (447)
T 1nhp_A 375 FKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFDKPWNIINTA 438 (447)
T ss_dssp EEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCSSCHHHHH
T ss_pred EEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCCcccHHHHH
Confidence 677765 5899999987666 544 4456678899988873 33 46799999877655443
No 16
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2.3e-47 Score=392.60 Aligned_cols=403 Identities=20% Similarity=0.307 Sum_probs=307.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
++||+|||||+||++||..|++.+. ..+|+|||+++..+|.++.++. ++........++ .....+++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~l-----------~~~~~~~~ 102 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDE-NANVVTLEKGEIYSYAQCGLPY-VISGAIASTEKL-----------IARNVKTF 102 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCT-TCEEEEECSSSCCSBCGGGHHH-HHTTSSSCGGGG-----------BSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCCCCCCCcch-hhcCCcCCHHHh-----------hhcCHHHH
Confidence 4699999999999999999999732 3489999999887766543321 111111111111 23445666
Q ss_pred H-HcCcEEEeCCcEEEEecCCCEEEECC---Cc--EEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhh
Q 010917 140 K-EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 213 (497)
Q Consensus 140 ~-~~~v~~~~~~~v~~i~~~~~~v~~~~---g~--~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 213 (497)
. +.+++++.+++|+.++.+.+.+.+.+ |+ ++.||+||+|||+.|. .|.++|.+.++++++++..+...+.+.+
T Consensus 103 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~ 181 (480)
T 3cgb_A 103 RDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV-MPEWEGRDLQGVHLLKTIPDAERILKTL 181 (480)
T ss_dssp HHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCBTTTSBTEECCSSHHHHHHHHHHH
T ss_pred HhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc-CCCCCCccCCCEEEeCCHHHHHHHHHHh
Confidence 4 45999999999999999888877753 65 7999999999999987 4566776667888888888887776665
Q ss_pred c--cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCc
Q 010917 214 E--KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR 291 (497)
Q Consensus 214 ~--~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~ 291 (497)
. .+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.||+++++++|++++.+ +.
T Consensus 182 ~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~ 258 (480)
T 3cgb_A 182 ETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-IYDGDMAEYIYKEADKHHIEILTNENVKAFKGN--ER 258 (480)
T ss_dssp HSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-SSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SB
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-cCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--Cc
Confidence 5 789999999999999999999999999999999998887 479999999999999999999999999999853 44
Q ss_pred EEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHH
Q 010917 292 VAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVD 370 (497)
Q Consensus 292 v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~ 370 (497)
+..+.++ +.++++|.||+|+|++|+.+++++++++.+ +|+|.||++++|+.|+|||+|||+..+....|....+.++.
T Consensus 259 v~~v~~~-~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~ 337 (480)
T 3cgb_A 259 VEAVETD-KGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGT 337 (480)
T ss_dssp EEEEEET-TEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHH
T ss_pred EEEEEEC-CCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHH
Confidence 5456664 457999999999999999999999998875 57899999999999999999999987665545444456788
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC-CCCceeeeccccCCCCcceeeEEeecCCCc-------E---EEEccC--------CC
Q 010917 371 HARQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T---IEIGNF--------DP 431 (497)
Q Consensus 371 ~A~~~g~~~a~~i~~~~~~~~~-~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~---~~~~~~--------~~ 431 (497)
.|..||+.+|.+|++. ...|. ..+++|+.+++.. +..+|....+ + ...... ..
T Consensus 338 ~A~~qg~~aa~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 409 (480)
T 3cgb_A 338 TANKQGRLAGLNMLDK-RRAFKGTLGTGIIKFMNLT-------LARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKP 409 (480)
T ss_dssp HHHHHHHHHHHHHTTC-CCCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCE
T ss_pred HHHHHHHHHHHHhcCC-CccCCCccceeEEEECCcE-------EEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCce
Confidence 9999999999999964 34443 3456778777653 6677765321 1 111110 12
Q ss_pred cEEEEEEE--CCEEEEEEeecCC-hHH-hhHHHHHHhCCCCCC-hhh--hcCCCcHHHHHHHHH
Q 010917 432 KIATFWID--SGKLKGVLVESGS-PEE-FQLLPTLARSQPFVD-KAK--LQQASSVEEALEIAR 488 (497)
Q Consensus 432 ~~~~~~~~--~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ 488 (497)
.+.+++++ +|+|+|+++++.. +.+ +..+..+++.+.+++ ... +..|||++|++..+.
T Consensus 410 ~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~ 473 (480)
T 3cgb_A 410 LYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSVWDPIQ 473 (480)
T ss_dssp EEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCHHH
T ss_pred EEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCchhHHH
Confidence 36677774 5999999987666 555 456677889998887 343 357899998765543
No 17
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.1e-46 Score=377.22 Aligned_cols=367 Identities=20% Similarity=0.273 Sum_probs=289.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCC-CCHhH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGER-QTPEW 138 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 138 (497)
++||+|||||+||++||..|++.|+ +.+|+|+|+++...|.++.++..+.. .....++ .. ....+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~~~--~~~~~~~-----------~~~~~~~~ 69 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGFSK--NKDADGL-----------AMAEPGAM 69 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTTTT--TCCHHHH-----------EEECHHHH
T ss_pred CCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHHhC--CCCHHHh-----------hccCHHHH
Confidence 5799999999999999999999996 56899999998777777665542211 1111111 11 23455
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCe
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKK 218 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~ 218 (497)
+++.+++++.+++|+.++.+.+++.+++ ..+.||+||+|||+.|. .|.++|.+.+++++.+++.+...+...+..+++
T Consensus 70 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 147 (384)
T 2v3a_A 70 AEQLNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPI-RVPVEGDAQDALYPINDLEDYARFRQAAAGKRR 147 (384)
T ss_dssp HHHTTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEEC-CCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCE
T ss_pred HHhCCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcC-CCCCCCcCcCCEEEECCHHHHHHHHHhhccCCe
Confidence 6788999999889999998888888865 46999999999999987 455677666788999999888888777777999
Q ss_pred EEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC
Q 010917 219 VVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE 298 (497)
Q Consensus 219 vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~ 298 (497)
++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||+++++++|++++..+ +. ..+.+.
T Consensus 148 v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~~ 225 (384)
T 2v3a_A 148 VLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EG-LEAHLS 225 (384)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEET-TE-EEEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC-CE-EEEEEC
Confidence 9999999999999999999999999999999998876799999999999999999999999999998643 32 367888
Q ss_pred CCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHH
Q 010917 299 DGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQH 378 (497)
Q Consensus 299 ~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~ 378 (497)
+|+++++|.||+|+|.+|+++++++++++.++| |.||++++|+.|+|||+|||+..+... ..++..|..||+.
T Consensus 226 ~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~------~~~~~~a~~~g~~ 298 (384)
T 2v3a_A 226 DGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGLN------LLYVMPLMACARA 298 (384)
T ss_dssp TSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTEEECGGGEEETTBC------CCSHHHHHHHHHH
T ss_pred CCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCCC------cchHHHHHHHHHH
Confidence 999999999999999999998999999988765 999999999999999999999754321 2367789999999
Q ss_pred HHHHHhcCCCCCC--CCCCceeeeccccCCCCcceeeEEeecCCC---cEEEEccCCCcEEEEEEE-CCEEEEEEeecCC
Q 010917 379 CIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWID-SGKLKGVLVESGS 452 (497)
Q Consensus 379 ~a~~i~~~~~~~~--~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 452 (497)
+|+||++.. .++ ..+|+.+ |.. + ..++.+|.... .....++ ...+.+++++ +|+|+|+++++..
T Consensus 299 ~a~~i~g~~-~~~~~~~~p~~~---~~~-~----~~~~~~g~~~~~~~~~~~~~~-~~g~~~~~~~~~~~i~G~~~~g~~ 368 (384)
T 2v3a_A 299 LAQTLAGNP-SQVAYGPMPVTV---KTP-A----CPLVVSPPPRGMDGQWLVEGS-GTDLKVLCRDTAGRVIGYALTGAA 368 (384)
T ss_dssp HHHHHTTCC-CCCCCCCCCEEE---CCT-T----SCEEEECCCTTCCCEEEEEEE-TTEEEEEEECTTSCEEEEEEEGGG
T ss_pred HHHHhcCCC-ccCCCCCcceEE---EEC-C----eeEEEecCCCCCCceEEEEec-CCcEEEEEEccCCEEEEEEEECcc
Confidence 999999743 444 4566632 111 1 12566665432 2233333 3457788775 7999999987777
Q ss_pred hHHhhHHHH
Q 010917 453 PEEFQLLPT 461 (497)
Q Consensus 453 ~~~~~~~~~ 461 (497)
+.++..+.+
T Consensus 369 a~e~~~~~~ 377 (384)
T 2v3a_A 369 VNEKLALNK 377 (384)
T ss_dssp GGGHHHHHT
T ss_pred hHHHHHHHH
Confidence 777554443
No 18
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.5e-46 Score=395.30 Aligned_cols=386 Identities=19% Similarity=0.343 Sum_probs=301.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 140 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (497)
+||+|||||+||++||..|++.+. ..+|+|||+++..+|.++.++. ++.........+ .....+++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~-~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~-----------~~~~~~~~~ 68 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSE-TAEIIMFERGEYVSFANCGLPY-HISGEIAQRSAL-----------VLQTPESFK 68 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHH-HHTSSSCCGGGG-----------BCCCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCCccccccCchH-HhcCCcCChHHh-----------hccCHHHHH
Confidence 699999999999999999999954 4599999999998887654442 221111111110 123344454
Q ss_pred -HcCcEEEeCCcEEEEecCCCEEEECC---Cc--EEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhh-
Q 010917 141 -EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL- 213 (497)
Q Consensus 141 -~~~v~~~~~~~v~~i~~~~~~v~~~~---g~--~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~- 213 (497)
+.+++++++++|+.++++.+.+.+.+ +. ++.||+||||||+.|. .|.++|.+.+++++.++..+.+.+.+.+
T Consensus 69 ~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~ipG~~~~~v~~~~~~~~~~~l~~~~~ 147 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPI-VPPIPGVDNPLTHSLRNIPDMDRILQTIQ 147 (565)
T ss_dssp HHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTCCSTTEECCSSHHHHHHHHHHHH
T ss_pred HhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHh
Confidence 58999999999999999998887753 43 7899999999999887 4667887778888888888887776543
Q ss_pred -ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeC-----
Q 010917 214 -EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG----- 287 (497)
Q Consensus 214 -~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~----- 287 (497)
..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++...+.+.+++.||++++++.+++++..
T Consensus 148 ~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~ 226 (565)
T 3ntd_A 148 MNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT-PVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHV 226 (565)
T ss_dssp HTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCC
T ss_pred hCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch-hcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccc
Confidence 3578999999999999999999999999999999999988 589999999999999999999999999999862
Q ss_pred -------------CCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEecccc
Q 010917 288 -------------SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVA 353 (497)
Q Consensus 288 -------------~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~ 353 (497)
+++.+ .+.+.+|+++++|.||+|+|++|++++++.+|++.+ +|+|.||++++|+.|+|||+|||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (565)
T 3ntd_A 227 ASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAV 305 (565)
T ss_dssp CCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGB
T ss_pred cccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeE
Confidence 23443 467788999999999999999999999998898875 688999999999999999999999
Q ss_pred ccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCC-CceeeeccccCCCCcceeeEEeecCCCc---------E
Q 010917 354 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYL-PYFYSRVFEYEGSPRKVWWQFFGDNVGE---------T 423 (497)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~-p~~~~~~~~~~g~~~~~~~~~~g~~~~~---------~ 423 (497)
..+....|......++..|..||+.+|.||++.. ..|... |+.|+.+|+.. +..+|....+ .
T Consensus 306 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~~ 377 (565)
T 3ntd_A 306 EEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE-ERYQGTQGTAICKVFDLA-------VGATGKNEKQLKQAGIAFEK 377 (565)
T ss_dssp CEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEE
T ss_pred eeccccCCceeecccHHHHHHHHHHHHHHhcCCC-ccCCCcccceEEEEcCcE-------EEEecCCHHHHHHcCCCeEE
Confidence 8777666666556688899999999999999754 446554 45566677643 6677765421 1
Q ss_pred EEE---c--cC----CCcEEEEEEE--CCEEEEEEeecCCh-HH-hhHHHHHHhCCCCCC
Q 010917 424 IEI---G--NF----DPKIATFWID--SGKLKGVLVESGSP-EE-FQLLPTLARSQPFVD 470 (497)
Q Consensus 424 ~~~---~--~~----~~~~~~~~~~--~~~~~g~~~~~~~~-~~-~~~~~~~~~~~~~~~ 470 (497)
... + .. ...+.|+.++ +++|+|+++++..+ .+ +..+..+++.+.+++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~ 437 (565)
T 3ntd_A 378 VYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVE 437 (565)
T ss_dssp EEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHH
T ss_pred EEEecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHH
Confidence 111 1 01 1236788774 58999999877776 55 445556678887765
No 19
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=3.1e-45 Score=386.50 Aligned_cols=389 Identities=20% Similarity=0.318 Sum_probs=299.0
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
.+++++|+|||||+||++||..|++.+. ..+|+|||+++..+|.++.++. ++.........+ ....+.
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~~~~~~~lp~-~~~g~~~~~~~~----------~~~~~~ 100 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSE-EDEIIMVERGEYISFANCGLPY-YIGGVITERQKL----------LVQTVE 100 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHH-HHTTSSCCGGGG----------BSSCHH
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCc-CCCEEEEECCCCccccCCCCch-hhcCcCCChHHh----------hccCHH
Confidence 4556899999999999999999999943 3499999999988877654432 111111111110 012344
Q ss_pred hHHHHcCcEEEeCCcEEEEecCCCEEEEC---CCc--EEEeccEEeccCCCCCcCCCCCCC-CCCcEEEecCHHHHHHHH
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEKQTLITN---SGK--LLKYGSLIVATGCTASRFPEKIGG-YLPGVHYIRDVADADALI 210 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~~---~g~--~i~~d~lvlAtG~~~~~~~~~~g~-~~~gv~~~~~~~~~~~~~ 210 (497)
.+.++.+++++++++|+.++.+.+.+.+. ++. .+.||+||+|||+.|. .|.++|. +.+++++.+++.+...+.
T Consensus 101 ~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~~v~~~~~~~~~~~~~ 179 (588)
T 3ics_A 101 RMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPI-VPSIPGIEEAKALFTLRNVPDTDRIK 179 (588)
T ss_dssp HHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTTTTCTTEEECSSHHHHHHHH
T ss_pred HHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCC-CCCCCCcccCCCeEEeCCHHHHHHHH
Confidence 55568899999999999999999888774 455 6899999999999887 4566776 678899998888887776
Q ss_pred Hhh--ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCC
Q 010917 211 SSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 288 (497)
Q Consensus 211 ~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~ 288 (497)
..+ ..+++++|||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.+++.||++++++.|++++..+
T Consensus 180 ~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~ 258 (588)
T 3ics_A 180 AYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVFEDGVDALEENG 258 (588)
T ss_dssp HHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG
T ss_pred HHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC
Confidence 554 36899999999999999999999999999999999999886 899999999999999999999999999998542
Q ss_pred CCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccc
Q 010917 289 DGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVE 367 (497)
Q Consensus 289 ~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~ 367 (497)
+ .+.+.+|+++++|.||+|+|++|++++++.+|++.+ +|+|.||++++|+.|+|||+|||+..+....|......
T Consensus 259 -~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~ 334 (588)
T 3ics_A 259 -A---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIP 334 (588)
T ss_dssp -T---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCC
T ss_pred -C---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccc
Confidence 2 477889999999999999999999999999999875 68899999999999999999999987766556554556
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCCC-CCCCceeeeccccCCCCcceeeEEeecCCCc---------EEE---Ecc--C---
Q 010917 368 HVDHARQSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TIE---IGN--F--- 429 (497)
Q Consensus 368 ~~~~A~~~g~~~a~~i~~~~~~~~-~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~---------~~~---~~~--~--- 429 (497)
.+..|..||+.+|.+|++.....| ..+|..+...++.. +..+|....+ ... ... .
T Consensus 335 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~-------~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~ 407 (588)
T 3ics_A 335 LAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLT-------VATTGLNEKILKRLNIPYEVVHVQANSHAGYYPN 407 (588)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTT
T ss_pred cHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeE-------EEEecCCHHHHHHcCCCeEEEEEecCCccccCCC
Confidence 788899999999999997233334 34566555445432 5566654321 111 111 0
Q ss_pred -CCcEEEEEEE--CCEEEEEEeecCC-hHH-hhHHHHHHhCCCCCC
Q 010917 430 -DPKIATFWID--SGKLKGVLVESGS-PEE-FQLLPTLARSQPFVD 470 (497)
Q Consensus 430 -~~~~~~~~~~--~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~ 470 (497)
...+.|+.++ +++|+|+++++.+ +.+ +..+..+++.+.+++
T Consensus 408 ~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~ 453 (588)
T 3ics_A 408 ATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVL 453 (588)
T ss_dssp CCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTT
T ss_pred CceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHH
Confidence 1246777774 5899999986653 555 445566788888876
No 20
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=4.1e-43 Score=364.41 Aligned_cols=403 Identities=20% Similarity=0.244 Sum_probs=289.0
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC----CCCCCccccC-----------CCCCCCCCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE----RPALTKGYLF-----------PLDKKPARLP 121 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~----~~~l~~~~l~-----------~~~~~~~~~~ 121 (497)
++.++||+|||||+||++||.+|++.|+ +|+|||+++...-. .+.-++.++. ........+.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 116 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGG---RQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMT 116 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHH
Confidence 4456899999999999999999999987 89999998732100 0000000000 0000000000
Q ss_pred C----CccccCCCCCCCCH---hHH-----HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCC
Q 010917 122 G----FHTCVGSGGERQTP---EWY-----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEK 189 (497)
Q Consensus 122 ~----~~~~~~~~~~~~~~---~~~-----~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~ 189 (497)
. ..... ........ .++ ++.++++++..++..++. +++.+. +..+.||+||+|||+.|. .|.+
T Consensus 117 ~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~-~p~i 191 (523)
T 1mo9_A 117 EKVVGIKEVV-DLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPG-TLDV 191 (523)
T ss_dssp TCCCCHHHHH-HHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECC-CCCS
T ss_pred hhhhhHHHHH-HHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCC-CCCC
Confidence 0 00000 00000022 455 678999985568888875 567776 678999999999999987 4556
Q ss_pred CCCCCCcEEEecCHHHHHHHH-HhhccC-CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHH
Q 010917 190 IGGYLPGVHYIRDVADADALI-SSLEKA-KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQL 267 (497)
Q Consensus 190 ~g~~~~gv~~~~~~~~~~~~~-~~~~~~-~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~ 267 (497)
+|.+.+++++. +.+. .....+ ++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.
T Consensus 192 ~G~~~~~v~~~------~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~ 264 (523)
T 1mo9_A 192 PGVNAKGVFDH------ATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDR 264 (523)
T ss_dssp TTTTSBTEEEH------HHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHH
T ss_pred CCcccCcEeeH------HHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHH
Confidence 66555556543 2333 222334 99999999999999999999999999999999999885 799999999999
Q ss_pred HHHCCcEEEcCCeEEEEEeCCCCcE--EEEEeCCCc-EEEcCEEEEeccCcCCCc-chhhcCCccc-CCCEEecCCCCCC
Q 010917 268 YQQNGVKFVKGASIKNLEAGSDGRV--AAVKLEDGS-TIDADTIVIGIGAKPTVS-PFERVGLNSS-VGGIQVDGQFRTR 342 (497)
Q Consensus 268 l~~~GV~i~~~~~v~~i~~~~~~~v--~~v~~~~g~-~i~~D~vv~a~G~~p~~~-~~~~~gl~~~-~g~i~vd~~~~t~ 342 (497)
+++.||+++++++|++++..+++++ ..+.+.+|+ ++++|.||+|+|++|+++ +++++|++.+ +|+|.||+++||+
T Consensus 265 l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~ 344 (523)
T 1mo9_A 265 MKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTS 344 (523)
T ss_dssp HHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCS
T ss_pred HHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccC
Confidence 9999999999999999986545543 357788887 899999999999999998 7999999875 6779999999999
Q ss_pred CCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC-CCCCCCceeeeccccCCCCcceeeEEeecCCC
Q 010917 343 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH-TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 421 (497)
Q Consensus 343 ~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~-~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~ 421 (497)
.|+|||+|||+..+. .+..|..||+.+|.||++.... .|..+|+++..... +..+|....
T Consensus 345 ~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~---------~a~vG~~e~ 405 (523)
T 1mo9_A 345 VPNVYAVGDLIGGPM----------EMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYE---------VSFLGMGEE 405 (523)
T ss_dssp STTEEECGGGGCSSC----------SHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSE---------EEEEECCHH
T ss_pred CCCEEEEeecCCCcc----------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCc---------eEEEeCCHH
Confidence 999999999997542 4556999999999999974322 35667876542221 445554321
Q ss_pred -------cEEE-E---c------------------------cCCCcEEEEEEE--CCEEEEEEeecCChHHh-hHHHHHH
Q 010917 422 -------ETIE-I---G------------------------NFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLA 463 (497)
Q Consensus 422 -------~~~~-~---~------------------------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~~ 463 (497)
++.. . . .....+.+++++ +++|+|+++++..+.++ ..+..+|
T Consensus 406 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai 485 (523)
T 1mo9_A 406 EARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLI 485 (523)
T ss_dssp HHHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHH
T ss_pred HHHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 1111 0 0 111347788775 58999999877766654 5666778
Q ss_pred hCCCCCC-h-hh--hcCCCcHHHHHHHHHccCCc
Q 010917 464 RSQPFVD-K-AK--LQQASSVEEALEIARAALPV 493 (497)
Q Consensus 464 ~~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~~~ 493 (497)
+.+.+++ . .. ++.|||++|+++.+++.+..
T Consensus 486 ~~~~t~~~l~~~~~~~~~Pt~~e~~~~~~~~~~~ 519 (523)
T 1mo9_A 486 KQGLTVDELGDMDELFLNPTHFIQLSRLRAGSKN 519 (523)
T ss_dssp HTTCBHHHHHTSCCCSSCSCCHHHHHHHHTTCSS
T ss_pred HCCCCHHHHHhCCcceECCCHHHHHHHHHHhhHh
Confidence 9998886 2 33 68899999999999887543
No 21
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=3.1e-43 Score=361.17 Aligned_cols=401 Identities=16% Similarity=0.216 Sum_probs=279.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-Ccccc-----------------CCC-CCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGYL-----------------FPL-DKKP 117 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~---~~l-~~~~l-----------------~~~-~~~~ 117 (497)
++||+|||||+||++||..|++.|+ +|+|||+++...... ... ++.++ .+. ....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGM---KTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 4799999999999999999999988 899999986432100 000 00000 000 0000
Q ss_pred CCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC--cEEEeccEEeccCCCCCcCCCCCCC
Q 010917 118 ARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGG 192 (497)
Q Consensus 118 ~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lvlAtG~~~~~~~~~~g~ 192 (497)
.++..+.... ...+......++++.+++++.++. ..++.....+.+.+| ..+.||+||+|||+.|.. |.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~-~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~-p~~~g~ 156 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEG-SFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTE-LPFLPF 156 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEE-EEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-BTTBCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCC-CCCCCC
Confidence 0000000000 000000113456677999998754 457765556777777 689999999999998874 444554
Q ss_pred CCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHH-HHC
Q 010917 193 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY-QQN 271 (497)
Q Consensus 193 ~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l-~~~ 271 (497)
+.+++.+ .+.+......+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+ ++.
T Consensus 157 ~~~~v~t------~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~~ 229 (468)
T 2qae_A 157 DEKVVLS------STGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGALAKNE 229 (468)
T ss_dssp CSSSEEC------HHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHT
T ss_pred CcCceec------hHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHHHHHHHHHHhhcC
Confidence 4444432 2333333346799999999999999999999999999999999999974 8999999999999 999
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEeC--CC--cEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCC
Q 010917 272 GVKFVKGASIKNLEAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMP 344 (497)
Q Consensus 272 GV~i~~~~~v~~i~~~~~~~v~~v~~~--~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~ 344 (497)
||+++++++|++++..+++ + .+.+. +| +++++|.||+|+|++|++++ +++++++.+ +|+|.||+++||+.|
T Consensus 230 gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 307 (468)
T 2qae_A 230 KMKFMTSTKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIP 307 (468)
T ss_dssp CCEEECSCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSST
T ss_pred CcEEEeCCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCCC
Confidence 9999999999999865333 2 35554 66 67999999999999999988 788898876 577999999999999
Q ss_pred cEEEeccccc-cCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccccCCCCcceeeEEeecCCC-
Q 010917 345 GIFAIGDVAA-FPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG- 421 (497)
Q Consensus 345 ~iya~GD~~~-~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~- 421 (497)
+|||+|||+. .+. .+..|..||+.+|.+|++... ..|..+|++ ..++. .+..+|....
T Consensus 308 ~IyA~GD~~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~-------~~a~vG~~e~~ 368 (468)
T 2qae_A 308 DVYAIGDVVDKGPM----------LAHKAEDEGVACAEILAGKPGHVNYGVIPAV--IYTMP-------EVASVGKSEDE 368 (468)
T ss_dssp TEEECGGGBSSSCS----------CHHHHHHHHHHHHHHHTTCCCCCCTTSCCEE--ECSSS-------EEEEEECCHHH
T ss_pred CEEEeeccCCCCCc----------cHhHHHHHHHHHHHHHcCCCccCCCCCCCEE--EECCC-------ceEEEeCCHHH
Confidence 9999999998 332 456799999999999997431 234455643 22222 1555665422
Q ss_pred ------cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCC--hhhhcCCC
Q 010917 422 ------ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVD--KAKLQQAS 478 (497)
Q Consensus 422 ------~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~ 478 (497)
.+... ......|.+++++ +|+|+|+++++..+.++ ..+..+++.+.+++ ...++.||
T Consensus 369 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~P 448 (468)
T 2qae_A 369 LKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHP 448 (468)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 11110 0112458888886 69999999877776664 45566789998876 23358899
Q ss_pred cHHHHHHHHHccCCc
Q 010917 479 SVEEALEIARAALPV 493 (497)
Q Consensus 479 ~~~~~~~~~~~~~~~ 493 (497)
|++|+++.|++++..
T Consensus 449 t~~e~~~~~~~~~~~ 463 (468)
T 2qae_A 449 TMSEALKEACMALFA 463 (468)
T ss_dssp CTHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999876543
No 22
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=4.6e-43 Score=360.48 Aligned_cols=401 Identities=17% Similarity=0.236 Sum_probs=281.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CC-Ccccc------------------CCCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---AL-TKGYL------------------FPLDKKP 117 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---~l-~~~~l------------------~~~~~~~ 117 (497)
++||+|||||+||++||..|++.|+ +|+|||+++....... .. ++.++ .+.....
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGF---KTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVR 82 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCc
Confidence 4799999999999999999999987 8999999864321000 00 00000 0000000
Q ss_pred CCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECC-C-cEEEeccEEeccCCCCCcCCCCCCC
Q 010917 118 ARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-G-KLLKYGSLIVATGCTASRFPEKIGG 192 (497)
Q Consensus 118 ~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-g-~~i~~d~lvlAtG~~~~~~~~~~g~ 192 (497)
.++..+.... ..........++++.+++++.++ +..++.....+.+.+ + +++.||+||+|||+.|.. |.++|.
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~-p~i~g~ 160 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGY-GKITGKNQVTATKADGGTQVIDTKNILIATGSEVTP-FPGITI 160 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECC-CTTCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC-CCCCCC
Confidence 0000000000 00000011345677899999874 455666555666666 4 579999999999999874 445554
Q ss_pred CCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCC
Q 010917 193 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNG 272 (497)
Q Consensus 193 ~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~G 272 (497)
+..++.+ ++........+++++|||+|++|+|+|..|++.|.+|+++++.+.++++.+++++.+.+.+.+++.|
T Consensus 161 ~~~~v~t------~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~G 234 (474)
T 1zmd_A 161 DEDTIVS------STGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQG 234 (474)
T ss_dssp CSSSEEC------HHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTT
T ss_pred CcCcEEc------HHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCC
Confidence 3333432 2233332335799999999999999999999999999999999999884589999999999999999
Q ss_pred cEEEcCCeEEEEEeCCCCcEEEEE-----eCCCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCC
Q 010917 273 VKFVKGASIKNLEAGSDGRVAAVK-----LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMP 344 (497)
Q Consensus 273 V~i~~~~~v~~i~~~~~~~v~~v~-----~~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~ 344 (497)
|+++++++|++++..+++.+ .+. ..+++++++|.||+|+|++|++++ +++++++.+ +|+|.||+++||+.|
T Consensus 235 v~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~ 313 (474)
T 1zmd_A 235 FKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIP 313 (474)
T ss_dssp CEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBCSST
T ss_pred CEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCccCCC
Confidence 99999999999986543323 344 356678999999999999999987 788888876 577999999999999
Q ss_pred cEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccccCCCCcceeeEEeecCCCc-
Q 010917 345 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE- 422 (497)
Q Consensus 345 ~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~- 422 (497)
+|||+|||+..+. .+..|..||+.+|.||++... ..|..+|++| .++. .+..+|....+
T Consensus 314 ~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~-------~~a~vG~~e~~a 374 (474)
T 1zmd_A 314 NIYAIGDVVAGPM----------LAHKAEDEGIICVEGMAGGAVHIDYNCVPSVI--YTHP-------EVAWVGKSEEQL 374 (474)
T ss_dssp TEEECGGGSSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEE--CSSS-------EEEEEECCHHHH
T ss_pred CEEEeeecCCCCc----------cHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEE--ECCC-------CeEEEeCCHHHH
Confidence 9999999998542 456799999999999997432 2355677654 2221 15556654321
Q ss_pred ------EEE-E-----------ccCCCcEEEEEEE--CCEEEEEEeecCChHH-hhHHHHHHhCCCCCC--hhhhcCCCc
Q 010917 423 ------TIE-I-----------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVD--KAKLQQASS 479 (497)
Q Consensus 423 ------~~~-~-----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~ 479 (497)
+.. . ......|.+++++ +|+|+|+++++..+.+ +..+..+++.+.+++ ...++.|||
T Consensus 375 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt 454 (474)
T 1zmd_A 375 KEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPT 454 (474)
T ss_dssp HHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTC
T ss_pred HhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCC
Confidence 111 0 0112458888887 6899999987776655 456677789998886 234688999
Q ss_pred HHHHHHHHHccC
Q 010917 480 VEEALEIARAAL 491 (497)
Q Consensus 480 ~~~~~~~~~~~~ 491 (497)
++|++..|++++
T Consensus 455 ~~e~~~~~~~~~ 466 (474)
T 1zmd_A 455 LSEAFREANLAA 466 (474)
T ss_dssp THHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998653
No 23
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=6.1e-43 Score=358.92 Aligned_cols=397 Identities=17% Similarity=0.227 Sum_probs=281.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--------------------C--CCCCCCccccCCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--------------------Y--ERPALTKGYLFPLDKK 116 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~--------------------~--~~~~l~~~~l~~~~~~ 116 (497)
.++||+|||||+||++||..|++.|+ +|+|||++..-. + ...+...+ + .....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g-~-~~~~~ 77 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGA---QVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGG-I-AATVP 77 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTT-S-CCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCC-c-cCCCC
Confidence 45899999999999999999999987 899999983100 0 00000000 0 00000
Q ss_pred CCCCCCCccccCC--CCC--CCCHhHHHHc-CcEEEeCCcEEEEecCCCEEEECCC--cEEEeccEEeccCCCCCcCCCC
Q 010917 117 PARLPGFHTCVGS--GGE--RQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEK 189 (497)
Q Consensus 117 ~~~~~~~~~~~~~--~~~--~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lvlAtG~~~~~~~~~ 189 (497)
..++..+...... ... ....+++++. +++++.+ ++..++.....+.+.+| +.+.||+||+|||+.|. .|.+
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~-~p~i 155 (467)
T 1zk7_A 78 TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPA-VPPI 155 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEEC-CCCC
T ss_pred ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCC-CCCC
Confidence 0000000000000 000 0123445566 9999886 57788876667777777 67999999999999987 4555
Q ss_pred CCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHH
Q 010917 190 IGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ 269 (497)
Q Consensus 190 ~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~ 269 (497)
+|.+..++. +.+.+.+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ +++++.+.+.+.++
T Consensus 156 ~G~~~~~~~------~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~ 227 (467)
T 1zk7_A 156 PGLKESPYW------TSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTAAFR 227 (467)
T ss_dssp TTTTTSCCB------CHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHHHHH
T ss_pred CCCCcCcee------cHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHHHHH
Confidence 664332221 2334444445689999999999999999999999999999999999987 79999999999999
Q ss_pred HCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcE
Q 010917 270 QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGI 346 (497)
Q Consensus 270 ~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~i 346 (497)
+.||+++++++|++++.+ ++ ...+.++ +.++++|.||+|+|.+|++++ ++.++++.+ +|+|.||++++|+.|+|
T Consensus 228 ~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~~i 304 (467)
T 1zk7_A 228 AEGIEVLEHTQASQVAHM-DG-EFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNI 304 (467)
T ss_dssp HTTCEEETTCCEEEEEEE-TT-EEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred hCCCEEEcCCEEEEEEEe-CC-EEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCCCE
Confidence 999999999999999854 22 3346665 457999999999999999875 578888876 56799999999999999
Q ss_pred EEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccccCCCCcceeeEEeecCCC----
Q 010917 347 FAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---- 421 (497)
Q Consensus 347 ya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~---- 421 (497)
||+|||+..+. .+..|..||+.+|.||++... ..+..+|++ ..++. .+.++|....
T Consensus 305 ya~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~-------~~a~vG~~~~~a~~ 365 (467)
T 1zk7_A 305 YAAGDCTDQPQ----------FVYVAAAAGTRAAINMTGGDAALDLTAMPAV--VFTDP-------QVATVGYSEAEAHH 365 (467)
T ss_dssp EECSTTBSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCCTTCEEE--ECSSS-------EEEEEECCHHHHHH
T ss_pred EEEeccCCCcc----------cHHHHHHHHHHHHHHHcCCCcccCCCCCCEE--EecCC-------ceEEEecCHHHHHh
Confidence 99999998653 456799999999999997532 234555643 22221 1555665432
Q ss_pred ---cEEE-Ec-----------cCCCcEEEEEEE--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCC--hhhhcCCCcHH
Q 010917 422 ---ETIE-IG-----------NFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVD--KAKLQQASSVE 481 (497)
Q Consensus 422 ---~~~~-~~-----------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~ 481 (497)
++.. .- .....+.+++++ +|+|+|+++++..+.++ ..+..+++++.+++ ....+.|||++
T Consensus 366 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~ 445 (467)
T 1zk7_A 366 DGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMV 445 (467)
T ss_dssp TTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTT
T ss_pred cCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHH
Confidence 1111 10 112458888886 69999999877666554 45677889998876 23458899999
Q ss_pred HHHHHHHccCC
Q 010917 482 EALEIARAALP 492 (497)
Q Consensus 482 ~~~~~~~~~~~ 492 (497)
|+++.|++++.
T Consensus 446 e~~~~~~~~~~ 456 (467)
T 1zk7_A 446 EGLKLAAQTFN 456 (467)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 24
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.7e-43 Score=363.19 Aligned_cols=400 Identities=19% Similarity=0.219 Sum_probs=284.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCC---CCCC-Cccc----------------cCC--CC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYE---RPAL-TKGY----------------LFP--LD 114 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~---g~~~~~V~lie~~~~~~~~---~~~l-~~~~----------------l~~--~~ 114 (497)
++||+|||||+||++||..|++. |+ +|+|||+++ .... .... ++.+ ..+ ..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~---~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETT---QVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTE---EEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcC---EEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 47999999999999999999999 87 899999986 2100 0000 0000 000 00
Q ss_pred CCCCCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEec------CCCEEEECCCc--EEEeccEEeccCCCC
Q 010917 115 KKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDI------EKQTLITNSGK--LLKYGSLIVATGCTA 183 (497)
Q Consensus 115 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~------~~~~v~~~~g~--~i~~d~lvlAtG~~~ 183 (497)
....++....... .........+++++.+++++.+ ++..++. ....+.+++++ .+.||+||+|||+.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 0000000000000 0000001245567789999987 4777776 22345556675 799999999999998
Q ss_pred CcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHH
Q 010917 184 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 263 (497)
Q Consensus 184 ~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~ 263 (497)
.. |.++|.+..++.+..+.. .....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.
T Consensus 157 ~~-p~i~g~~~~~v~~~~~~~------~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~ 228 (499)
T 1xdi_A 157 RI-LPSAQPDGERILTWRQLY------DLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADAALV 228 (499)
T ss_dssp CC-CGGGCCCSSSEEEGGGGG------GCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHHHHH
T ss_pred CC-CCCCCCCcCcEEehhHhh------hhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHH
Confidence 74 555665555565543222 22235789999999999999999999999999999999999986 89999999
Q ss_pred HHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCC
Q 010917 264 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFR 340 (497)
Q Consensus 264 ~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~ 340 (497)
+.+.+++.||+++++++|++++.++ +.+ .+.+.+|+++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++|
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~ 306 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRTG-AGV-LVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSR 306 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSB
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC-CEE-EEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCcc
Confidence 9999999999999999999998653 333 567788889999999999999999988 788898876 47799999999
Q ss_pred CCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeeccccCCCCcceeeEEeec
Q 010917 341 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGD 418 (497)
Q Consensus 341 t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~ 418 (497)
|+.|+|||+|||+..+. .+..|..||+.+|.+|++... ..|..+|+++ .++. .+..+|.
T Consensus 307 t~~~~IyA~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~~-------~~a~vG~ 367 (499)
T 1xdi_A 307 TLATGIYAAGDCTGLLP----------LASVAAMQGRIAMYHALGEGVSPIRLRTVAATV--FTRP-------EIAAVGV 367 (499)
T ss_dssp CSSTTEEECSGGGTSCS----------CHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEE--CSSS-------EEEEEES
T ss_pred cCCCCEEEEeccCCCcc----------cHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEE--EecC-------CceEeCC
Confidence 99999999999998542 455699999999999997522 2345566643 2222 2566775
Q ss_pred CCCc-------EEE-E-----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCC--hhhh
Q 010917 419 NVGE-------TIE-I-----------GNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVD--KAKL 474 (497)
Q Consensus 419 ~~~~-------~~~-~-----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~ 474 (497)
...+ +.. . .+....|.+++++ +|+|+|+++++..+.++ ..+..+|+.+.+++ ...+
T Consensus 368 ~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~ 447 (499)
T 1xdi_A 368 PQSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTL 447 (499)
T ss_dssp CHHHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSB
T ss_pred CHHHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhccc
Confidence 5321 111 1 0112458888887 48999999877776664 45567788998886 2346
Q ss_pred cCCCcHHHHHHHHHccCCc
Q 010917 475 QQASSVEEALEIARAALPV 493 (497)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~ 493 (497)
+.|||++|+++.|++++..
T Consensus 448 ~~~Pt~~e~~~~~~~~~~~ 466 (499)
T 1xdi_A 448 AVYPSLSGSITEAARRLMA 466 (499)
T ss_dssp CCSSSTHHHHHHHHHHHCC
T ss_pred ccCCCchHHHHHHHHHHhc
Confidence 8899999999999876543
No 25
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-42 Score=357.05 Aligned_cols=398 Identities=19% Similarity=0.249 Sum_probs=277.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---CC--------------CCccccCCC-----C
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---PA--------------LTKGYLFPL-----D 114 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~~--------------l~~~~l~~~-----~ 114 (497)
.++||+|||||+||++||..|++.|+ +|+|||++....- .. |. ....+.... .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGA---KTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCC---cEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 35799999999999999999999987 8999999742100 00 00 000000000 0
Q ss_pred -CCCCCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCc--EEEeccEEeccCCCCCcCC-
Q 010917 115 -KKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTASRFP- 187 (497)
Q Consensus 115 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~--~i~~d~lvlAtG~~~~~~~- 187 (497)
....++..+.... .......+...+++.+++++.+ ++..++.....+.+.+|+ .+.||+||+|||+.|.. |
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~-p~ 164 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIF-PE 164 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECC-CT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC-CC
Confidence 0000000000000 0000000123455679999986 577676655567667776 79999999999998874 4
Q ss_pred CCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHH
Q 010917 188 EKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQL 267 (497)
Q Consensus 188 ~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~ 267 (497)
.++|.+ .. .+++.+......+++++|||+|++|+|+|..|+++|.+|+++++.+++++. +++++.+.+.+.
T Consensus 165 ~i~g~~-----~~---~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~ 235 (479)
T 2hqm_A 165 NIPGFE-----LG---TDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNTITDH 235 (479)
T ss_dssp TSTTGG-----GS---BCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHH
T ss_pred CCCCcc-----cc---cchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHHHHHHHHHH
Confidence 444421 11 123444444456899999999999999999999999999999999998875 899999999999
Q ss_pred HHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCC-cEEEcCEEEEeccCcCCCcc-hhhcCCccc-CCCEEecCCCCCCCC
Q 010917 268 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVSP-FERVGLNSS-VGGIQVDGQFRTRMP 344 (497)
Q Consensus 268 l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g-~~i~~D~vv~a~G~~p~~~~-~~~~gl~~~-~g~i~vd~~~~t~~~ 344 (497)
+++.||+++++++|++++..+++.+..+.+++| +++++|.||+|+|++|++.+ ++.+|++.+ +|+|.||++++|+.|
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 315 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNTNVP 315 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBCSST
T ss_pred HHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCccCCC
Confidence 999999999999999998654443456788899 78999999999999999977 788899876 578999999999999
Q ss_pred cEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC---C--CCCCCCCceeeeccccCCCCcceeeEEeecC
Q 010917 345 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ---T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDN 419 (497)
Q Consensus 345 ~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~---~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~ 419 (497)
+|||+|||+..+. .+..|..||+.+|.||++.. . .+|..+|+. .|..+ .+..+|..
T Consensus 316 ~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~---~~~~~------~~~~vGl~ 376 (479)
T 2hqm_A 316 NIYSLGDVVGKVE----------LTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSV---IFSHP------EAGSIGIS 376 (479)
T ss_dssp TEEECGGGTTSSC----------CHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEE---ECCSS------CEEEEECC
T ss_pred CEEEEEecCCCcc----------cHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeE---EECCC------CeEEEeCC
Confidence 9999999986432 56679999999999999643 2 244556642 22211 14445543
Q ss_pred CCc---------EEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC--hhh
Q 010917 420 VGE---------TIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD--KAK 473 (497)
Q Consensus 420 ~~~---------~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~ 473 (497)
..+ +... ..-...+.|++++ +++|+|+++++..+.++... ..+++.+.+++ ...
T Consensus 377 e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 456 (479)
T 2hqm_A 377 EKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNC 456 (479)
T ss_dssp HHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred HHHHHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhC
Confidence 210 1110 0112347788775 58999999877777775544 45678888776 234
Q ss_pred hcCCCcHHHHHHHHHc
Q 010917 474 LQQASSVEEALEIARA 489 (497)
Q Consensus 474 ~~~~~~~~~~~~~~~~ 489 (497)
++.|||++|+++.|+.
T Consensus 457 ~~~hPt~~e~~~~~~~ 472 (479)
T 2hqm_A 457 VAIHPTSAEELVTMRG 472 (479)
T ss_dssp CCCSSCSGGGGGSCC-
T ss_pred cCCCCChHHHHHHHHH
Confidence 6899999999987664
No 26
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.4e-43 Score=364.85 Aligned_cols=401 Identities=18% Similarity=0.269 Sum_probs=276.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-Ccccc------------CCC------CCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGYL------------FPL------DKKP 117 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~---~~l-~~~~l------------~~~------~~~~ 117 (497)
++||+||||||||++||..|++.|+ +|+|||+++...... ... ++.++ ... ....
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~ 81 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGF---NTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIK 81 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 4799999999999999999999987 899999965432000 000 00000 000 0000
Q ss_pred CCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC--cE------EEeccEEeccCCCCCcC
Q 010917 118 ARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KL------LKYGSLIVATGCTASRF 186 (497)
Q Consensus 118 ~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~------i~~d~lvlAtG~~~~~~ 186 (497)
.++..+.... .......+..++++.+++++.++.+. .+....++.+.+| +. +.||+||+|||+.|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~ 160 (478)
T 1v59_A 82 INVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPF 160 (478)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCC
Confidence 0000000000 00000002235667899999986554 3333334555566 56 99999999999987533
Q ss_pred CCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHH
Q 010917 187 PEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQ 266 (497)
Q Consensus 187 ~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~ 266 (497)
++....+ ..+.+ ++........+++++|||+|++|+|+|..|++.|.+||++++.+++++ .+++++.+.+.+
T Consensus 161 ---~g~~~~~-~~v~~---~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~ 232 (478)
T 1v59_A 161 ---PGIEIDE-EKIVS---STGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQK 232 (478)
T ss_dssp ---TTCCCCS-SSEEC---HHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHHH
T ss_pred ---CCCCCCC-ceEEc---HHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-ccCHHHHHHHHH
Confidence 3333333 11222 333333223579999999999999999999999999999999999998 589999999999
Q ss_pred HHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC-----CCcEEEcCEEEEeccCcCCCc--chhhcCCccc-CCCEEecCC
Q 010917 267 LYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-----DGSTIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDGQ 338 (497)
Q Consensus 267 ~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~-----~g~~i~~D~vv~a~G~~p~~~--~~~~~gl~~~-~g~i~vd~~ 338 (497)
.+++.||+++++++|++++..+++....+.+. +++++++|.||+|+|++|+++ ++++++++.+ +|+|.||++
T Consensus 233 ~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~ 312 (478)
T 1v59_A 233 FLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQ 312 (478)
T ss_dssp HHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTT
T ss_pred HHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcC
Confidence 99999999999999999985212333345554 456899999999999999998 7889999876 677999999
Q ss_pred CCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccccCCCCcceeeEEee
Q 010917 339 FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFG 417 (497)
Q Consensus 339 ~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g 417 (497)
+||+.|+|||+|||+..+. .+..|..||+.+|.+|++... .+|..+|++|..... +..+|
T Consensus 313 ~~t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~---------~a~vG 373 (478)
T 1v59_A 313 FNSKFPHIKVVGDVTFGPM----------LAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPE---------VAWVG 373 (478)
T ss_dssp SBCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSE---------EEEEE
T ss_pred CccCCCCEEEeeccCCCcc----------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCc---------EEEEE
Confidence 9999999999999998542 455799999999999997432 356778877654332 34455
Q ss_pred cCCC-------cEEE-------------EccCCCcEEEEEEE--CCEEEEEEeecCChHH-hhHHHHHHhCCCCCC-hhh
Q 010917 418 DNVG-------ETIE-------------IGNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVD-KAK 473 (497)
Q Consensus 418 ~~~~-------~~~~-------------~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~ 473 (497)
.... ++.. .++ ...+.+++++ +|+|+|+++++..+.+ +..+..+++.+.+++ ...
T Consensus 374 ~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~ 452 (478)
T 1v59_A 374 KTEEQLKEAGIDYKIGKFPFAANSRAKTNQD-TEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVAR 452 (478)
T ss_dssp CCHHHHHHTTCCEEEEEEEGGGCHHHHHTTC-CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHT
T ss_pred CCHHHHHHcCCCEEEEEEecccchhhhhcCC-CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhh
Confidence 4321 1111 111 2346677665 6999999987666555 556677889998885 333
Q ss_pred -hcCCCcHHHHHHHHHccCC
Q 010917 474 -LQQASSVEEALEIARAALP 492 (497)
Q Consensus 474 -~~~~~~~~~~~~~~~~~~~ 492 (497)
.+.||+++|++..++.++.
T Consensus 453 ~~~~~Pt~~e~~~~~~~~~~ 472 (478)
T 1v59_A 453 VCHAHPTLSEAFKEANMAAY 472 (478)
T ss_dssp SCCCTTCTTHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHh
Confidence 5889999999999986543
No 27
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.9e-43 Score=359.06 Aligned_cols=402 Identities=19% Similarity=0.287 Sum_probs=279.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CC-Ccccc-----------------CCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---AL-TKGYL-----------------FPLDKK 116 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---~l-~~~~l-----------------~~~~~~ 116 (497)
+.++||+|||||+||++||..|++.|+ +|+|||+++....... .. ++.++ ......
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGF---KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTC---CEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 346899999999999999999999988 8999999864321100 00 00000 000000
Q ss_pred CCCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC--cEEEeccEEeccCCCCCcCCCCCC
Q 010917 117 PARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIG 191 (497)
Q Consensus 117 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lvlAtG~~~~~~~~~~g 191 (497)
..++..+.... .......+..++++.+++++.++.+. ++.....+.+++| ..+.||+||+|||+.|.. |.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~-p~~~g 158 (470)
T 1dxl_A 81 EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VSPSEISVDTIEGENTVVKGKHIIIATGSDVKS-LPGVT 158 (470)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EETTEEEECCSSSCCEEEECSEEEECCCEEECC-BTTBC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCC
Confidence 00000000000 00000001345566799999986554 6655445555566 679999999999998874 44455
Q ss_pred CCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHC
Q 010917 192 GYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN 271 (497)
Q Consensus 192 ~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~ 271 (497)
.+.+++.+ ..........+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.
T Consensus 159 ~~~~~v~~------~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~ 231 (470)
T 1dxl_A 159 IDEKKIVS------STGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRSLEKQ 231 (470)
T ss_dssp CCSSSEEC------HHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHS
T ss_pred CCcccEEe------HHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHHHHHHHHHHHHc
Confidence 43334432 2233332335799999999999999999999999999999999999874 8999999999999999
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEeC---CC--cEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCC
Q 010917 272 GVKFVKGASIKNLEAGSDGRVAAVKLE---DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRM 343 (497)
Q Consensus 272 GV~i~~~~~v~~i~~~~~~~v~~v~~~---~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~ 343 (497)
||+++++++|.+++.++++ + .+.+. +| +++++|.||+|+|++||+++ +++++++.+ +|+|.||+++||+.
T Consensus 232 gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~ 309 (470)
T 1dxl_A 232 GMKFKLKTKVVGVDTSGDG-V-KLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNV 309 (470)
T ss_dssp SCCEECSEEEEEEECSSSS-E-EEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCSS
T ss_pred CCEEEeCCEEEEEEEcCCe-E-EEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccCC
Confidence 9999999999999864333 2 34443 44 68999999999999999988 788888876 57799999999999
Q ss_pred CcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeeccccCCCCcceeeEEeecCCC
Q 010917 344 PGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 421 (497)
Q Consensus 344 ~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~ 421 (497)
|+|||+|||+..+. .+..|..||+.+|.+|++. ..+ |..+|+ ...++.. +..+|....
T Consensus 310 ~~Iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~ 369 (470)
T 1dxl_A 310 SGVYAIGDVIPGPM----------LAHKAEEDGVACVEYLAGK-VGHVDYDKVPG--VVYTNPE-------VASVGKTEE 369 (470)
T ss_dssp TTEEECSTTSSSCC----------CHHHHHHHHHHHHHHHTTS-CCCCCTTSCCE--EECSSSE-------EEEEECCHH
T ss_pred CCEEEEeccCCCCc----------cHHHHHHHHHHHHHHHcCC-CcCCCCCCCCE--EEECCCc-------eEEEcCCHH
Confidence 99999999997532 4556999999999999964 333 444554 3323221 455665321
Q ss_pred -------cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCC-h-hhhcCC
Q 010917 422 -------ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVD-K-AKLQQA 477 (497)
Q Consensus 422 -------~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~-~-~~~~~~ 477 (497)
.+... ......|.+++++ +|+|+|+++++..+.++ ..+..+++.+.+++ . ..++.|
T Consensus 370 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~ 449 (470)
T 1dxl_A 370 QVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAH 449 (470)
T ss_dssp HHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCS
T ss_pred HHHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCC
Confidence 11110 0112458888886 68999999877776654 45566788998876 2 335889
Q ss_pred CcHHHHHHHHHccCCc
Q 010917 478 SSVEEALEIARAALPV 493 (497)
Q Consensus 478 ~~~~~~~~~~~~~~~~ 493 (497)
||++|+++.|++++..
T Consensus 450 Pt~~e~~~~~~~~~~~ 465 (470)
T 1dxl_A 450 PTMSEAIKEAAMATYD 465 (470)
T ss_dssp SCTTHHHHHHHHHHHS
T ss_pred CChHHHHHHHHHHHhc
Confidence 9999999999876543
No 28
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=3.4e-43 Score=360.47 Aligned_cols=399 Identities=20% Similarity=0.224 Sum_probs=275.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CCCCC-Ccccc------------CCCCCC----CCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ERPAL-TKGYL------------FPLDKK----PARL 120 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~~~l-~~~~l------------~~~~~~----~~~~ 120 (497)
++||+|||||+||++||..|++.|+ +|+|||++..... ..... ++.++ ...... ..++
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGL---STAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 3699999999999999999999988 8999999731100 00000 00000 000000 0000
Q ss_pred CCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC--cEEEeccEEeccCCCCCcCCCCCCCCCC
Q 010917 121 PGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLP 195 (497)
Q Consensus 121 ~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lvlAtG~~~~~~~~~~g~~~~ 195 (497)
....... .......+.+++++.+++++.++.+. ++.....+.+.+| +++.||+||+|||+.|.. |..++.+..
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~-~~~~g~~~~ 157 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL-VPGTSLSAN 157 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC-CTTCCCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCCCCce
Confidence 0000000 00000011345567899999876543 4443345666677 689999999999998864 444443222
Q ss_pred cEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEE
Q 010917 196 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 275 (497)
Q Consensus 196 gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i 275 (497)
+ .+ .+........+++++|||+|++|+|+|..|.++|.+|+++++.+++++. +++++.+.+.+.++++||++
T Consensus 158 -~---~~---~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i 229 (464)
T 2a8x_A 158 -V---VT---YEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADVSKEIEKQFKKLGVTI 229 (464)
T ss_dssp -E---EC---HHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEE
T ss_pred -E---Ee---cHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHcCCEE
Confidence 2 22 2333333345799999999999999999999999999999999999984 89999999999999999999
Q ss_pred EcCCeEEEEEeCCCCcEEEEEeC-CC--cEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcEEEe
Q 010917 276 VKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAI 349 (497)
Q Consensus 276 ~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~iya~ 349 (497)
+++++|++++.+++ .+ .+.+. +| +++++|.||+|+|++||+++ +++++++.+ +|+|.||+++||+.|+|||+
T Consensus 230 ~~~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~ 307 (464)
T 2a8x_A 230 LTATKVESIADGGS-QV-TVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAI 307 (464)
T ss_dssp ECSCEEEEEEECSS-CE-EEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEEEC
T ss_pred EeCcEEEEEEEcCC-eE-EEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEEEe
Confidence 99999999986433 33 35554 56 67999999999999999988 788898876 57799999999999999999
Q ss_pred ccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC---CCCCCceeeeccccCCCCcceeeEEeecCCC-----
Q 010917 350 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT---YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG----- 421 (497)
Q Consensus 350 GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~---~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~----- 421 (497)
|||+..+. .+..|..||+.+|.||++....+ |..+|++ ..++. .+..+|....
T Consensus 308 GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~-------~~a~vG~~e~~a~~~ 368 (464)
T 2a8x_A 308 GDVNGLLQ----------LAHVAEAQGVVAAETIAGAETLTLGDHRMLPRA--TFCQP-------NVASFGLTEQQARNE 368 (464)
T ss_dssp GGGGCSSC----------SHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEE--ECSSS-------EEEEEECCHHHHHHT
T ss_pred ECcCCCcc----------CHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEE--EECCC-------CeEEEcCCHHHHHhc
Confidence 99997532 45579999999999999723333 4556653 22221 1455665321
Q ss_pred --cEEE-E-----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCC-h-hhhcCCCcHHH
Q 010917 422 --ETIE-I-----------GNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVD-K-AKLQQASSVEE 482 (497)
Q Consensus 422 --~~~~-~-----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 482 (497)
.+.. . ......|.+++++ +++|+|+++++..+.++ ..+..+++.+.+++ . ..++.|||++|
T Consensus 369 g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 448 (464)
T 2a8x_A 369 GYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSE 448 (464)
T ss_dssp TCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTH
T ss_pred CCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHH
Confidence 1111 0 0112458888886 69999999877766554 45566788888876 2 33588999999
Q ss_pred HHHHHHccCC
Q 010917 483 ALEIARAALP 492 (497)
Q Consensus 483 ~~~~~~~~~~ 492 (497)
+++.|++++.
T Consensus 449 ~~~~~~~~~~ 458 (464)
T 2a8x_A 449 ALQECFHGLV 458 (464)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987644
No 29
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.1e-43 Score=357.23 Aligned_cols=396 Identities=21% Similarity=0.282 Sum_probs=274.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-Ccccc----------------CCCCCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYL----------------FPLDKKPAR 119 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~---~~~l-~~~~l----------------~~~~~~~~~ 119 (497)
++||+|||||+||++||..|++.|+ +|+|||++. ..-. .... ++.++ ........+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~-~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQ---KVTIVEKGN-LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTID 78 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCC-CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 4799999999999999999999987 899999983 2100 0000 00000 000000000
Q ss_pred CCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC-cEEEeccEEeccCCCCCcCCCCCCCCCC
Q 010917 120 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLP 195 (497)
Q Consensus 120 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g-~~i~~d~lvlAtG~~~~~~~~~~g~~~~ 195 (497)
+..+.... .......+.+++++.+++++.++.+ .++.....+.+.+| +++.||+||+|||+.|.. |..++.+..
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~-~~~~g~~~~ 156 (455)
T 1ebd_A 79 FAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FVDANTVRVVNGDSAQTYTFKNAIIATGSRPIE-LPNFKFSNR 156 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EEETTEEEEEETTEEEEEECSEEEECCCEEECC-BTTBCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-EccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC-CCCCCccce
Confidence 00000000 0000001134556679999987644 46765556666777 679999999999998874 444443221
Q ss_pred cEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEE
Q 010917 196 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 275 (497)
Q Consensus 196 gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i 275 (497)
+ .+ ..........+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++.||++
T Consensus 157 -v---~~---~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i 228 (455)
T 1ebd_A 157 -I---LD---STGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKGVEV 228 (455)
T ss_dssp -E---EC---HHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTCEE
T ss_pred -E---ec---HHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEE
Confidence 2 22 2333333345799999999999999999999999999999999998875 79999999999999999999
Q ss_pred EcCCeEEEEEeCCCCcEEEEEeC---CCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcEEEe
Q 010917 276 VKGASIKNLEAGSDGRVAAVKLE---DGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAI 349 (497)
Q Consensus 276 ~~~~~v~~i~~~~~~~v~~v~~~---~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~iya~ 349 (497)
+++++|++++.+++ .+ .+.+. +++++++|.||+|+|++|++++ +++++++.+ +|+|.||+++||+.|+|||+
T Consensus 229 ~~~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~ 306 (455)
T 1ebd_A 229 VTNALAKGAEERED-GV-TVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAI 306 (455)
T ss_dssp EESEEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEEC
T ss_pred EeCCEEEEEEEeCC-eE-EEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEEE
Confidence 99999999986433 22 34443 4568999999999999999987 678888876 57799999999999999999
Q ss_pred ccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeeccccCCCCcceeeEEeecCCC------
Q 010917 350 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------ 421 (497)
Q Consensus 350 GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~------ 421 (497)
|||+..+. .+..|..||+.+|.+|++. ..+ |..+|+ ...++.. +..+|....
T Consensus 307 GD~~~~~~----------~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~a~~~g 366 (455)
T 1ebd_A 307 GDIVPGPA----------LAHKASYEGKVAAEAIAGH-PSAVDYVAIPA--VVFSDPE-------CASVGYFEQQAKDEG 366 (455)
T ss_dssp GGGSSSCC----------CHHHHHHHHHHHHHHHTSC-CCCCCCSCCCE--EECSSSC-------EEEEECCHHHHHTTT
T ss_pred eccCCCcc----------cHHHHHHHHHHHHHHHcCC-CccCCCCCCCE--EEECCCc-------eEEEeCCHHHHHhcC
Confidence 99997542 4556999999999999974 333 444554 3323221 445554321
Q ss_pred -cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhCCCCCC--hhhhcCCCcHHHH
Q 010917 422 -ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD--KAKLQQASSVEEA 483 (497)
Q Consensus 422 -~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~ 483 (497)
.+... ......|.+++++ +++|+|+++++..+.++. .+..+++.+.+++ ...++.|||++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~ 446 (455)
T 1ebd_A 367 IDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEI 446 (455)
T ss_dssp CCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHH
T ss_pred CCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHH
Confidence 11110 0112458888886 699999998777666544 5566788888886 3446899999999
Q ss_pred HHHHHccC
Q 010917 484 LEIARAAL 491 (497)
Q Consensus 484 ~~~~~~~~ 491 (497)
++.|++++
T Consensus 447 ~~~~~~~~ 454 (455)
T 1ebd_A 447 AMEAAEVA 454 (455)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998754
No 30
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.4e-43 Score=364.81 Aligned_cols=399 Identities=17% Similarity=0.236 Sum_probs=274.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-Ccc----------------ccCCCCCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKG----------------YLFPLDKKPAR 119 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~---~~~l-~~~----------------~l~~~~~~~~~ 119 (497)
++||+|||||+||++||..|++.|+ +|+|||+++..... .... ++. +-........+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGL---KVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELD 82 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 5799999999999999999999988 89999996543200 0000 000 00000000000
Q ss_pred CCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC------------cEEEeccEEeccCCCCC
Q 010917 120 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG------------KLLKYGSLIVATGCTAS 184 (497)
Q Consensus 120 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g------------~~i~~d~lvlAtG~~~~ 184 (497)
+....... .......+..++++.+++++.++.+. ++.....+.+.+| .++.||+||+|||+.|.
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 83 IDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 00000000 00000001234567899999876543 4443233443445 57999999999999987
Q ss_pred cCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHH
Q 010917 185 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 264 (497)
Q Consensus 185 ~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~ 264 (497)
.++.++. + ..+. + .+........+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+
T Consensus 162 ~~~~i~~-~-~~v~---~---~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l 232 (482)
T 1ojt_A 162 KLPFIPE-D-PRII---D---SSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-ADRDLVKVW 232 (482)
T ss_dssp CCSSCCC-C-TTEE---C---HHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHH
T ss_pred CCCCCCc-c-CcEE---c---HHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-cCHHHHHHH
Confidence 5442332 1 1232 2 3333333345899999999999999999999999999999999999985 899999999
Q ss_pred HHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC----CcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecC
Q 010917 265 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDG 337 (497)
Q Consensus 265 ~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~----g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~ 337 (497)
.+.++++||+++++++|.+++..+++ ..+.+.+ |+++++|.||+|+|++||+++ +++++++.+ +|+|.||+
T Consensus 233 ~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~ 310 (482)
T 1ojt_A 233 QKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDK 310 (482)
T ss_dssp HHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCT
T ss_pred HHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCC
Confidence 99999999999999999999864322 3566666 778999999999999999987 688898876 47799999
Q ss_pred CCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccccCCCCcceeeEEe
Q 010917 338 QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFF 416 (497)
Q Consensus 338 ~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~ 416 (497)
++||+.|+|||+|||+..+. .+..|..||+.+|.||++... ..|..+|++ ..++.. +..+
T Consensus 311 ~~~t~~~~IyA~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~--~~~~~~-------~a~v 371 (482)
T 1ojt_A 311 QMRTNVPHIYAIGDIVGQPM----------LAHKAVHEGHVAAENCAGHKAYFDARVIPGV--AYTSPE-------VAWV 371 (482)
T ss_dssp TSBCSSTTEEECGGGTCSSC----------CHHHHHHHHHHHHHHHTTCCCCCCCCCCCEE--ECSSSC-------EEEE
T ss_pred CcccCCCCEEEEEcccCCCc----------cHHHHHHHHHHHHHHHcCCCccCCCCCCCEE--EEcCCC-------eEEE
Confidence 99999999999999998542 456799999999999997431 234445643 222221 4556
Q ss_pred ecCCC-------cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhCCCCCC-h-h
Q 010917 417 GDNVG-------ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD-K-A 472 (497)
Q Consensus 417 g~~~~-------~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~ 472 (497)
|.... .+.. . ......|.+++++ +|+|+|+++++..+.++. .+..+++.+.+++ . .
T Consensus 372 G~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~ 451 (482)
T 1ojt_A 372 GETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGK 451 (482)
T ss_dssp ECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHT
T ss_pred eCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhc
Confidence 65421 1111 0 0112458888884 699999998777666644 5556788998876 2 3
Q ss_pred hhcCCCcHHHHHHHHHccCC
Q 010917 473 KLQQASSVEEALEIARAALP 492 (497)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~ 492 (497)
.++.|||++|++..|++++.
T Consensus 452 ~~~~~Pt~~e~~~~a~~~~~ 471 (482)
T 1ojt_A 452 TIHPHPTLGESIGMAAEVAL 471 (482)
T ss_dssp SCCCSSSSTTHHHHHHHHHH
T ss_pred CccCCCCHHHHHHHHHHHHh
Confidence 46899999999999987543
No 31
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.3e-42 Score=356.05 Aligned_cols=399 Identities=16% Similarity=0.173 Sum_probs=278.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCCC-cccc-----------CCCCCCCCCCCCCc
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PALT-KGYL-----------FPLDKKPARLPGFH 124 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~---~~l~-~~~l-----------~~~~~~~~~~~~~~ 124 (497)
.+||+|||||+||++||..|++.|+ +|+|||+.+.....- ...+ +.++ ........++....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~---~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKY---NVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQ 80 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHH
Confidence 4799999999999999999999998 899999776432100 0000 0000 00000000000000
Q ss_pred cccCC--CCC--CCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcE--EEeccEEeccCCCCCcCCCCCCCCCCcEE
Q 010917 125 TCVGS--GGE--RQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL--LKYGSLIVATGCTASRFPEKIGGYLPGVH 198 (497)
Q Consensus 125 ~~~~~--~~~--~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~--i~~d~lvlAtG~~~~~~~~~~g~~~~gv~ 198 (497)
..... ... .....++++.+++++.+ ++..++.....+.+++|+. +.||+||+|||+.|. .|.++|.+ +
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~--~-- 154 (466)
T 3l8k_A 81 DRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA-KLRLPGVE--Y-- 154 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC-CCCCTTGG--G--
T ss_pred HHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc-CCCCCCcc--c--
Confidence 00000 000 01122334568999886 7888998777888888888 999999999999887 45555532 2
Q ss_pred EecCHHHHHHHH-HhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEc
Q 010917 199 YIRDVADADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 277 (497)
Q Consensus 199 ~~~~~~~~~~~~-~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~ 277 (497)
+.+..+...+. .....+++++|||+|++|+|+|..|++.|.+|+++++.+++++..+++++.+.+.+.++ |++++
T Consensus 155 -~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~ 230 (466)
T 3l8k_A 155 -CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKF 230 (466)
T ss_dssp -SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEEC
T ss_pred -eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEE
Confidence 22323322111 22335789999999999999999999999999999999999986449999999888776 99999
Q ss_pred CCeEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEeccCcCCCcc-hhhcCCcccCCCEEecCCCCCCCCcEEEeccc
Q 010917 278 GASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSP-FERVGLNSSVGGIQVDGQFRTRMPGIFAIGDV 352 (497)
Q Consensus 278 ~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vv~a~G~~p~~~~-~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~ 352 (497)
+++|++++..+++.+ .+.+. +|+ ++++|.||+|+|++|++++ +++++++.++++|.||+++||+.|+|||+|||
T Consensus 231 ~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~Gi~vd~~~~t~~~~Iya~GD~ 309 (466)
T 3l8k_A 231 NSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTGIVVDETMKTNIPNVFATGDA 309 (466)
T ss_dssp SCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSSBCCCTTCBCSSTTEEECGGG
T ss_pred CCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCCEeECCCccCCCCCEEEEEec
Confidence 999999986432444 46666 665 8999999999999999986 78889987643499999999999999999999
Q ss_pred cccCCccCCcccccccHHHHHHHHHHHHHHHhcC--CC--CCCCCCCceeeeccccCCCCcceeeEEeecCCCc------
Q 010917 353 AAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA--QT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------ 422 (497)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~--~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~------ 422 (497)
+..+. .+..|..||+.+|.||++. .. ..+..+|+ . .|..+ .+..+|....+
T Consensus 310 ~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~--~-~~~~~------~~a~vG~te~~a~~~g~ 370 (466)
T 3l8k_A 310 NGLAP----------YYHAAVRMSIAAANNIMANGMPVDYVDVKSIPV--T-IYTIP------SLSYVGILPSKARKMGI 370 (466)
T ss_dssp TCSCC----------SHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCE--E-ECSSS------CEEEEECCHHHHHHHTC
T ss_pred CCCCc----------cHhHHHHHHHHHHHHHhCCCCCccccCCCCCcE--E-EECCC------CeEEecCCHHHHHhCCC
Confidence 98632 5567999999999999975 32 24455554 2 23221 15566654321
Q ss_pred -E-EEEc-----------cCCCcEEEEEEEC--CEEEEEEeecCChHHhh-HHHHHHhCCCCCC--hhhhcCCCcHHHHH
Q 010917 423 -T-IEIG-----------NFDPKIATFWIDS--GKLKGVLVESGSPEEFQ-LLPTLARSQPFVD--KAKLQQASSVEEAL 484 (497)
Q Consensus 423 -~-~~~~-----------~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 484 (497)
. +..- .....+.++.++. |+|+|+++++.++.++. .+..+++.+.+++ ...++.|||++|++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~ 450 (466)
T 3l8k_A 371 EIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEII 450 (466)
T ss_dssp CEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHH
T ss_pred CEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHH
Confidence 1 1110 0124577887764 89999999888777755 4455678998886 34469999999999
Q ss_pred HHHHccC
Q 010917 485 EIARAAL 491 (497)
Q Consensus 485 ~~~~~~~ 491 (497)
+.|+++.
T Consensus 451 ~~~~~~~ 457 (466)
T 3l8k_A 451 SYTARKV 457 (466)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 32
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=4.1e-42 Score=350.62 Aligned_cols=391 Identities=18% Similarity=0.240 Sum_probs=271.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---CC---------------CCccccCCCCCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---PA---------------LTKGYLFPLDKKPAR 119 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~~---------------l~~~~l~~~~~~~~~ 119 (497)
++||+|||||+||++||..|++.|+ +|+|||++....- .. |. ....+.........+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~ 80 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQ---KCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFN 80 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 4799999999999999999999987 8999999742100 00 00 000000000000000
Q ss_pred CCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCc
Q 010917 120 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG 196 (497)
Q Consensus 120 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~g 196 (497)
+..+.... .......+...+++.+++++.+ ++..++. +++.+ +++.+.||+||+|||+.|. .|.++|. +
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~-~p~i~g~--~- 152 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPS-HPDIPGV--E- 152 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEEC-CCCSTTG--G-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCC-CCCCCCc--c-
Confidence 00000000 0000001123346679999987 4555664 56777 6778999999999999887 3544442 1
Q ss_pred EEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEE
Q 010917 197 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 276 (497)
Q Consensus 197 v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~ 276 (497)
...+ .+.+......+++++|||+|++|+|+|..|+++|.+|+++++.+.+++. +++++.+.+.+.+++.||+++
T Consensus 153 --~~~~---~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~ 226 (450)
T 1ges_A 153 --YGID---SDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-FDPMISETLVEVMNAEGPQLH 226 (450)
T ss_dssp --GSBC---HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHSCEEE
T ss_pred --ceec---HHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-hhHHHHHHHHHHHHHCCCEEE
Confidence 1222 3334443446899999999999999999999999999999999998874 899999999999999999999
Q ss_pred cCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc-c-hhhcCCccc-CCCEEecCCCCCCCCcEEEecccc
Q 010917 277 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVA 353 (497)
Q Consensus 277 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~ 353 (497)
++++|++++..+++. ..+.+.+|+++++|.||+|+|++|+++ + ++++|++.+ +|+|.||++++|+.|+|||+|||+
T Consensus 227 ~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (450)
T 1ges_A 227 TNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNT 305 (450)
T ss_dssp CSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECSGGG
T ss_pred eCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEeccC
Confidence 999999998654443 367888999999999999999999987 3 688888876 677999999999999999999998
Q ss_pred ccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC---CCCCCCCceeeeccccCCCCcceeeEEeecCCC---------
Q 010917 354 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--------- 421 (497)
Q Consensus 354 ~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~---~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~--------- 421 (497)
..+. .+..|..||+.+|.||+++.. ..|..+|+. .|..+ .+..+|....
T Consensus 306 ~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~---~~~~~------~~a~vG~~e~~a~~~~g~~ 366 (450)
T 1ges_A 306 GAVE----------LTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTV---VFSHP------PIGTVGLTEPQAREQYGDD 366 (450)
T ss_dssp TSCC----------CHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEE---ECCSS------CEEEEECCHHHHHHHHCGG
T ss_pred CCCc----------cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeE---EECCC------ceEEEeCCHHHHHhcCCCC
Confidence 6432 566799999999999997432 345566653 22211 1444554321
Q ss_pred cEEE-E-----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC-h-hhhcCCCcHHHHH
Q 010917 422 ETIE-I-----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEAL 484 (497)
Q Consensus 422 ~~~~-~-----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~ 484 (497)
.+.. . ......+.++.++ +++|+|+++++..+.++... ..+++.+.+++ . ..++.|||++|++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 446 (450)
T 1ges_A 367 QVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEF 446 (450)
T ss_dssp GEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGG
T ss_pred cEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHH
Confidence 1111 0 1112346777765 58999999877777775544 45578888876 2 3468999999988
Q ss_pred HHH
Q 010917 485 EIA 487 (497)
Q Consensus 485 ~~~ 487 (497)
..+
T Consensus 447 ~~~ 449 (450)
T 1ges_A 447 VTM 449 (450)
T ss_dssp GSC
T ss_pred Hhh
Confidence 653
No 33
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2e-42 Score=357.52 Aligned_cols=401 Identities=17% Similarity=0.238 Sum_probs=265.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---CC--C------------CccccCCCCCCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---PA--L------------TKGYLFPLDKKPARL 120 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~~--l------------~~~~l~~~~~~~~~~ 120 (497)
++||+|||||+||++||..|++.|+ +|+|||+++...- .. |. + ...+-.... ...++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~ 77 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNA---KVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK-FSFNL 77 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC-CccCH
Confidence 4799999999999999999999987 8999999852100 00 00 0 000000000 00000
Q ss_pred CCCccccC---CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECC-------------CcEEEeccEEeccCCCCC
Q 010917 121 PGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-------------GKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 121 ~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-------------g~~i~~d~lvlAtG~~~~ 184 (497)
+.+..... ......+..++++.+++++.++ +..++. +++.+.+ +..+.||+||+|||+.|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~ 154 (500)
T 1onf_A 78 PLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV 154 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCC
Confidence 00000000 0000011234567799999874 333443 4455533 567999999999999987
Q ss_pred cCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHH
Q 010917 185 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 264 (497)
Q Consensus 185 ~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~ 264 (497)
. |.++|. +.+.+ ++.+..... +++++|||+|++|+|+|..|+++|.+||++++.+++++. +++++.+.+
T Consensus 155 ~-p~i~G~--~~~~~------~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l 223 (500)
T 1onf_A 155 F-PPVKGI--ENTIS------SDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESVINVL 223 (500)
T ss_dssp C-CSCTTG--GGCEE------HHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHHHHHH
T ss_pred C-CCCCCC--CcccC------HHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhhHHHH
Confidence 4 544543 12222 233333222 899999999999999999999999999999999999874 899999999
Q ss_pred HHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcE-EEcCEEEEeccCcCCCc-c-hhhcCCcccCCCEEecCCCCC
Q 010917 265 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTVS-P-FERVGLNSSVGGIQVDGQFRT 341 (497)
Q Consensus 265 ~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~-i~~D~vv~a~G~~p~~~-~-~~~~gl~~~~g~i~vd~~~~t 341 (497)
.+.++++||+++++++|++++..+++. ..+.+.+|++ +++|.||+|+|++|+++ + +++++++.++|+|.||+++||
T Consensus 224 ~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~~~t 302 (500)
T 1onf_A 224 ENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDENQRT 302 (500)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTTCBC
T ss_pred HHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCCccc
Confidence 999999999999999999998654443 3577889988 99999999999999986 4 688888887778999999999
Q ss_pred CCCcEEEeccccccCCcc-----------------------CC-cccccccHHHHHHHHHHHHHHHhcCCC--CCCCCCC
Q 010917 342 RMPGIFAIGDVAAFPLKM-----------------------YD-RTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLP 395 (497)
Q Consensus 342 ~~~~iya~GD~~~~~~~~-----------------------~g-~~~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p 395 (497)
+.|+|||+|||+..+... .+ .......+..|..||+.+|.||+++.. ..|..+|
T Consensus 303 ~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p 382 (500)
T 1onf_A 303 SVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIP 382 (500)
T ss_dssp SSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCC
T ss_pred CCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCC
Confidence 999999999999532100 00 002245788899999999999997443 2455566
Q ss_pred ceeeeccccCCCCcceeeEEeecCCC---------cEEE----------------EccCCCcEEEEEEE--CCEEEEEEe
Q 010917 396 YFYSRVFEYEGSPRKVWWQFFGDNVG---------ETIE----------------IGNFDPKIATFWID--SGKLKGVLV 448 (497)
Q Consensus 396 ~~~~~~~~~~g~~~~~~~~~~g~~~~---------~~~~----------------~~~~~~~~~~~~~~--~~~~~g~~~ 448 (497)
+. .|... .+..+|.... .+.. .......+.++.++ +++|+|+++
T Consensus 383 ~~---~~~~~------~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~ 453 (500)
T 1onf_A 383 TV---IFSHP------PIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHI 453 (500)
T ss_dssp EE---ECCSS------CEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEE
T ss_pred eE---EEcCc------ceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEE
Confidence 52 22211 1444453311 1111 01112447777774 589999998
Q ss_pred ecCChHHhhHH-HHHHhCCCCCC--hhhhcCCCcHHHHHHHHH
Q 010917 449 ESGSPEEFQLL-PTLARSQPFVD--KAKLQQASSVEEALEIAR 488 (497)
Q Consensus 449 ~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 488 (497)
++..+.++... ..+++.+.+++ ...++.|||++|++..++
T Consensus 454 ~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 454 IGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp ESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred ECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHhc
Confidence 77767665544 45678888776 234689999999998765
No 34
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-42 Score=358.82 Aligned_cols=405 Identities=18% Similarity=0.264 Sum_probs=276.2
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---C---CC--------C-------CccccCCCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---R---PA--------L-------TKGYLFPLDK 115 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~---~---~~--------l-------~~~~l~~~~~ 115 (497)
+++++||+||||||||++||..|++.|+ +|+|||+++..... . |. . ...+-.....
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~ 98 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGM---KVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVAN 98 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCC
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCC
Confidence 4456899999999999999999999998 89999987543210 0 00 0 0000000000
Q ss_pred CCCCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC--cEEEeccEEeccCCCCCcCCCCC
Q 010917 116 KPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKI 190 (497)
Q Consensus 116 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lvlAtG~~~~~~~~~~ 190 (497)
...++....... ..........++++.+++++.+ .+..++.....+.+.+| .++.||+||||||+.|..+ |
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~i---p 174 (491)
T 3urh_A 99 PKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGI---P 174 (491)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCB---T
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCC---C
Confidence 000000000000 0000001123456679999886 44445555556666666 5799999999999986433 3
Q ss_pred CCC--CCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHH
Q 010917 191 GGY--LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY 268 (497)
Q Consensus 191 g~~--~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l 268 (497)
|.. .++... .+++........+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+
T Consensus 175 g~~~~~~~~~~----~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l 249 (491)
T 3urh_A 175 GVEVAFDEKTI----VSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRML 249 (491)
T ss_dssp TBCCCCCSSSE----ECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHHH
T ss_pred CcccccCCeeE----EehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHHH
Confidence 332 222211 123444444456899999999999999999999999999999999999875 7999999999999
Q ss_pred HHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCC
Q 010917 269 QQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFR 340 (497)
Q Consensus 269 ~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~ 340 (497)
++.||++++++++++++..+++ + .+.+.+ | +++++|.||+|+|++|++++ ++.+++..+ +|+|.||++++
T Consensus 250 ~~~gV~v~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~ 327 (491)
T 3urh_A 250 TKQGIDFKLGAKVTGAVKSGDG-A-KVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQ 327 (491)
T ss_dssp HHTTCEEECSEEEEEEEEETTE-E-EEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCB
T ss_pred HhCCCEEEECCeEEEEEEeCCE-E-EEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCC
Confidence 9999999999999999865333 2 344432 4 58999999999999999986 778888876 57799999999
Q ss_pred CCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccccCCCCcceeeEEeecC
Q 010917 341 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDN 419 (497)
Q Consensus 341 t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~ 419 (497)
|+.|+|||+|||+..+. .+..|..||+.+|.+|++... ..|..+|+. . |..+ .+..+|..
T Consensus 328 t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~--~-~~~p------~~a~vGlt 388 (491)
T 3urh_A 328 TSIAGVYAIGDVVRGPM----------LAHKAEDEGVAVAEIIAGQAGHVNYDVIPGV--V-YTQP------EVASVGKT 388 (491)
T ss_dssp CSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHTTSCCCCCTTCCCEE--E-CSSS------CEEEEECC
T ss_pred CCCCCEEEEEecCCCcc----------chhHHHHHHHHHHHHHcCCCcccCCCCCCEE--E-EccC------CeEEEeCC
Confidence 99999999999996542 556799999999999997432 234556652 2 3221 15556654
Q ss_pred CCc-------E-EEEcc-----------CCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC-h-hhhc
Q 010917 420 VGE-------T-IEIGN-----------FDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQ 475 (497)
Q Consensus 420 ~~~-------~-~~~~~-----------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~ 475 (497)
..+ + +..-. -...+.|+.++ +++|+|+++++.++.++... ..+++.+.+++ . ...+
T Consensus 389 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~ 468 (491)
T 3urh_A 389 EEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCH 468 (491)
T ss_dssp HHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCC
T ss_pred HHHHHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCcc
Confidence 321 1 11100 12357777765 58999999988877775544 55678888886 3 3358
Q ss_pred CCCcHHHHHHHHHccCCcc
Q 010917 476 QASSVEEALEIARAALPVE 494 (497)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~ 494 (497)
.|||++|+++.|++++..+
T Consensus 469 ~hPt~~e~~~~~~~~~~~~ 487 (491)
T 3urh_A 469 AHPTMSEAVKEAALSTFFK 487 (491)
T ss_dssp CSSCTTHHHHHHHHHHHC-
T ss_pred CCCChHHHHHHHHHHhhhc
Confidence 8999999999999876543
No 35
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=4.2e-42 Score=354.20 Aligned_cols=317 Identities=20% Similarity=0.313 Sum_probs=240.8
Q ss_pred HHHc-CcEEEeCCcEEEEecCCCEEEEC---C-----CcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHH
Q 010917 139 YKEK-GIEMIYQDPVTSIDIEKQTLITN---S-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 209 (497)
Q Consensus 139 ~~~~-~v~~~~~~~v~~i~~~~~~v~~~---~-----g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~ 209 (497)
+++. +++++.+ ++..++ .+++.++ + ++.+.||+||||||+.|.. |.++|. +.+. +++.+
T Consensus 117 l~~~~gv~~~~g-~~~~i~--~~~v~v~~~~~~~~~~~~~~~~d~lViATGs~p~~-p~i~G~--~~~~------~~~~~ 184 (495)
T 2wpf_A 117 FNDTEGLDFFLG-WGSLES--KNVVVVRETADPKSAVKERLQADHILLATGSWPQM-PAIPGI--EHCI------SSNEA 184 (495)
T ss_dssp HHHCTTEEEEES-EEEEEE--TTEEEEESSSSTTSCEEEEEEEEEEEECCCEEECC-CCCTTG--GGCE------EHHHH
T ss_pred HhcCCCeEEEEe-EEEEee--CCEEEEeecCCccCCCCeEEEcCEEEEeCCCCcCC-CCCCCc--cccc------cHHHH
Confidence 4567 9999987 466665 4677775 4 6789999999999999874 444543 2222 23333
Q ss_pred HHhhccCCeEEEEcCCHHHHHHHHHHHhC---CCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEe
Q 010917 210 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 286 (497)
Q Consensus 210 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~ 286 (497)
......+++++|||+|++|+|+|..|+++ |.+|+++++.+++++. +++++.+.+.+.++++||+++++++|++++.
T Consensus 185 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 263 (495)
T 2wpf_A 185 FYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-FDETIREEVTKQLTANGIEIMTNENPAKVSL 263 (495)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCEEEESCCEEEEEE
T ss_pred HhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 33334578999999999999999999999 9999999999999875 8999999999999999999999999999986
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcc
Q 010917 287 GSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 363 (497)
Q Consensus 287 ~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~ 363 (497)
.+++. ..+.+.+|+++++|.||+|+|++|++++ +++++++.+ +|+|.||+++||+.|+|||+|||+..+
T Consensus 264 ~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~------- 335 (495)
T 2wpf_A 264 NTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL------- 335 (495)
T ss_dssp CTTSC-EEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC-------
T ss_pred cCCce-EEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc-------
Confidence 53333 4678889999999999999999999974 678898876 678999999999999999999999642
Q ss_pred cccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeeccccCCCCcceeeEEeecCCCc-------E-EEE-------
Q 010917 364 ARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T-IEI------- 426 (497)
Q Consensus 364 ~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~-~~~------- 426 (497)
..+..|..||+.+|.+|++... ..|..+|+ . .|... .+..+|....+ + +..
T Consensus 336 ---~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~-~~~~~------~~a~vGl~e~~a~~~~~~~~v~~~~~~~~~ 403 (495)
T 2wpf_A 336 ---MLTPVAINEGAALVDTVFGNKPRKTDHTRVAS--A-VFSIP------PIGTCGLIEEVAAKEFEKVAVYMSSFTPLM 403 (495)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEE--E-ECCSS------CEEEEECCHHHHHHHSSEEEEEEEEECCTH
T ss_pred ---cCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCE--E-EECCC------CeEEEeCCHHHHHhcCCCEEEEEEecCchh
Confidence 2566799999999999997433 34555554 2 23221 15566654321 1 111
Q ss_pred ----ccCCCcE-EEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhCCCCCC--hhhhcCCCcHHHHHHHHH
Q 010917 427 ----GNFDPKI-ATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD--KAKLQQASSVEEALEIAR 488 (497)
Q Consensus 427 ----~~~~~~~-~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 488 (497)
+.....+ .++.++ +++|+|+++++.++.++. .+..+++.+.+++ ...++.|||++|++..++
T Consensus 404 ~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (495)
T 2wpf_A 404 HNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMR 475 (495)
T ss_dssp HHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCC
T ss_pred hhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 1112457 788776 589999999777776655 4456678888876 234689999999998765
No 36
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=7.1e-42 Score=350.25 Aligned_cols=396 Identities=20% Similarity=0.258 Sum_probs=275.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CCCCC-Ccccc--------------CCC-CCCCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ERPAL-TKGYL--------------FPL-DKKPARLP 121 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~~~l-~~~~l--------------~~~-~~~~~~~~ 121 (497)
++||+|||||+||++||..|++.|+ +|+|||+++.... ..... ++.++ +.. .....++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~---~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGL---KVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 4799999999999999999999987 8999999862100 00000 00000 000 00000000
Q ss_pred CCccccC---CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEE
Q 010917 122 GFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVH 198 (497)
Q Consensus 122 ~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~ 198 (497)
.+..... .........++++.+++++.++.+ .++ .+++.+. |+++.||+||+|||++|..+|.+++. ..+.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~--~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~--~~v~ 156 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFAR-LVG--PKEVEVG-GERYGAKSLILATGSEPLELKGFPFG--EDVW 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEE-EEE--TTEEEET-TEEEEEEEEEECCCEEECCBTTBCCS--SSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEE-Ecc--CCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCC--CcEE
Confidence 0000000 000000123556789999987544 455 4677776 67899999999999998754323331 1232
Q ss_pred EecCHHHHHHHHHhhc-cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEc
Q 010917 199 YIRDVADADALISSLE-KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 277 (497)
Q Consensus 199 ~~~~~~~~~~~~~~~~-~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~ 277 (497)
+ .+.+.+... .+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++.||++++
T Consensus 157 ---~---~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gV~i~~ 229 (464)
T 2eq6_A 157 ---D---STRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPETAALLRRALEKEGIRVRT 229 (464)
T ss_dssp ---C---HHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEEC
T ss_pred ---c---HHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhcCCEEEc
Confidence 2 333333223 5799999999999999999999999999999999998874 7999999999999999999999
Q ss_pred CCeEEEEEeCCCCcEEEEEeC-C--Cc--EEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcEEEe
Q 010917 278 GASIKNLEAGSDGRVAAVKLE-D--GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAI 349 (497)
Q Consensus 278 ~~~v~~i~~~~~~~v~~v~~~-~--g~--~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~iya~ 349 (497)
+++|++++..+ +.+ .+.+. + |+ ++++|.||+|+|++|++++ ++.+++..+ +|+|.||+++||+.|+|||+
T Consensus 230 ~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~ 307 (464)
T 2eq6_A 230 KTKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGVYAI 307 (464)
T ss_dssp SEEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTEEEC
T ss_pred CCEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCEEEE
Confidence 99999998643 333 45655 6 76 8999999999999999986 578888874 57799999999999999999
Q ss_pred ccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccccCCCCcceeeEEeecCCC-------
Q 010917 350 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------- 421 (497)
Q Consensus 350 GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~------- 421 (497)
|||+..+. .+..|..||+.+|.+|++... .+|. +|++ ..++. .+..+|....
T Consensus 308 GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~--~~~~~-------~~a~vG~~e~~a~~~g~ 367 (464)
T 2eq6_A 308 GDAARPPL----------LAHKAMREGLIAAENAAGKDSAFDYQ-VPSV--VYTSP-------EWAGVGLTEEEAKRAGY 367 (464)
T ss_dssp GGGTCSSC----------CHHHHHHHHHHHHHHHTTCCCCCCCC-CCEE--ECSSS-------EEEEEECCHHHHHHTTC
T ss_pred eccCCCcc----------cHHHHHHHHHHHHHHhcCCCcccCCC-CCeE--EECCC-------CEEEEeCCHHHHHhcCC
Confidence 99997542 455699999999999996432 2345 6653 21221 1455664432
Q ss_pred cEEE-Ec-----------cCCCcEEEEEEE--CCEEEEEEeecCChHHh-hHHHHHHhCCCCCC--hhhhcCCCcHHHHH
Q 010917 422 ETIE-IG-----------NFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVD--KAKLQQASSVEEAL 484 (497)
Q Consensus 422 ~~~~-~~-----------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 484 (497)
.+.. .- .....+.+++++ +|+|+|+++++..+.++ ..+..+++.+.+++ ...++.|||++|++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~ 447 (464)
T 2eq6_A 368 KVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESL 447 (464)
T ss_dssp CEEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHH
T ss_pred CEEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHH
Confidence 1111 00 112457888876 58999999877777664 55667789998886 34468899999999
Q ss_pred HHHHccCCc
Q 010917 485 EIARAALPV 493 (497)
Q Consensus 485 ~~~~~~~~~ 493 (497)
..|++++..
T Consensus 448 ~~~~~~~~~ 456 (464)
T 2eq6_A 448 MEAAEAFHK 456 (464)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 999876543
No 37
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=6.7e-42 Score=352.45 Aligned_cols=317 Identities=18% Similarity=0.249 Sum_probs=241.2
Q ss_pred HHHc-CcEEEeCCcEEEEecCCCEEEEC-----CC---cEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHH
Q 010917 139 YKEK-GIEMIYQDPVTSIDIEKQTLITN-----SG---KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 209 (497)
Q Consensus 139 ~~~~-~v~~~~~~~v~~i~~~~~~v~~~-----~g---~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~ 209 (497)
+++. +++++.+ ++..++. +++.+. +| ..+.||+||||||+.|.. |.++|. +. +. +.+.+
T Consensus 113 l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~p~~-p~i~g~--~~---~~---~~~~~ 180 (490)
T 1fec_A 113 FADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEYILLATGSWPQH-LGIEGD--DL---CI---TSNEA 180 (490)
T ss_dssp HHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCCEEECC-CCSBTG--GG---CB---CHHHH
T ss_pred HhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCEEEEeCCCCCCC-CCCCCc--cc---ee---cHHHH
Confidence 4567 9999987 4777765 456653 56 679999999999999874 444443 11 22 23334
Q ss_pred HHhhccCCeEEEEcCCHHHHHHHHHHHhC---CCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEe
Q 010917 210 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 286 (497)
Q Consensus 210 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~---g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~ 286 (497)
......+++++|||+|++|+|+|..|.++ |.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.
T Consensus 181 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~ 259 (490)
T 1fec_A 181 FYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-FDSELRKQLTEQLRANGINVRTHENPAKVTK 259 (490)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTEEEEETCCEEEEEE
T ss_pred hhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 33334679999999999999999999999 9999999999999875 8999999999999999999999999999986
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc-c-hhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcc
Q 010917 287 GSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 363 (497)
Q Consensus 287 ~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~ 363 (497)
.+++. ..+.+.+|+++++|.||+|+|++|+++ + ++++|++.+ +|+|.||+++||+.|+|||+|||+..+
T Consensus 260 ~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~------- 331 (490)
T 1fec_A 260 NADGT-RHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV------- 331 (490)
T ss_dssp CTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGGCSC-------
T ss_pred cCCCE-EEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc-------
Confidence 53333 367888998999999999999999987 4 688899876 678999999999999999999999642
Q ss_pred cccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeeccccCCCCcceeeEEeecCCCc-------EE-EE-------
Q 010917 364 ARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TI-EI------- 426 (497)
Q Consensus 364 ~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~~-~~------- 426 (497)
..+..|..||+.+|.+|+++.. ..|..+|+ ...++.. +..+|....+ +. ..
T Consensus 332 ---~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~a~~~~~~~~~~~~~~~~~~ 399 (490)
T 1fec_A 332 ---MLTPVAINEGAAFVDTVFANKPRATDHTKVAC--AVFSIPP-------MGVCGYVEEDAAKKYDQVAVYESSFTPLM 399 (490)
T ss_dssp ---CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCE--EECCSSC-------EEEEECCHHHHHHHCSEEEEEEEEECCHH
T ss_pred ---cCHHHHHHHHHHHHHHhcCCCCCcCCCCCccE--EEECCCC-------eEEEeCCHHHHHhcCCCEEEEEeecChhh
Confidence 2567799999999999997433 34555664 2222222 5566654321 11 11
Q ss_pred ----ccCCCcEE-EEEEE--CCEEEEEEeecCChHHhh-HHHHHHhCCCCCC-h-hhhcCCCcHHHHHHHHH
Q 010917 427 ----GNFDPKIA-TFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD-K-AKLQQASSVEEALEIAR 488 (497)
Q Consensus 427 ----~~~~~~~~-~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 488 (497)
+.....|. |++++ +++|+|+++++..+.++. .+..+++.+.+++ . ..++.|||++|+++.++
T Consensus 400 ~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 471 (490)
T 1fec_A 400 HNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMR 471 (490)
T ss_dssp HHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC
T ss_pred hhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHH
Confidence 11124577 88876 589999999777776655 4456688888876 2 34689999999998765
No 38
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=3.3e-41 Score=347.03 Aligned_cols=402 Identities=18% Similarity=0.236 Sum_probs=279.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCcc----------------------------cc
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKG----------------------------YL 110 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~----------------------------~l 110 (497)
+++||+|||||+||++||..|++.|+ +|+|||+++...-. ..+... +-
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~gG~-~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g 77 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGL---KTALIEKYKGKEGK-TALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHG 77 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEECCBCTTSS-BCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCCccCCC-CCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 35899999999999999999999998 89999998622100 000000 00
Q ss_pred CCCCCCCCCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC--cEEEeccEEeccCCCCCc
Q 010917 111 FPLDKKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 111 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lvlAtG~~~~~ 185 (497)
........+++...... ..........++++.+++++.+ ++..++.....+...+| ..+.||+||+|||+.|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 156 (476)
T 3lad_A 78 ISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVE 156 (476)
T ss_dssp EECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCC
Confidence 00000000000000000 0000000123455679999986 45556666667777777 579999999999998874
Q ss_pred CCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHH
Q 010917 186 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 265 (497)
Q Consensus 186 ~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~ 265 (497)
+|. ++.+.+.+.+ +..+......+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.
T Consensus 157 ~~~-~~~~~~~v~~------~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~ 228 (476)
T 3lad_A 157 IPP-APVDQDVIVD------STGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAKEAQ 228 (476)
T ss_dssp CTT-SCCCSSSEEE------HHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHH
T ss_pred CCC-CCCCcccEEe------chhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHHHHHHH
Confidence 432 2322334443 3333333456899999999999999999999999999999999999974 8999999999
Q ss_pred HHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCC---cEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCC
Q 010917 266 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQF 339 (497)
Q Consensus 266 ~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g---~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~ 339 (497)
+.+++.||+++++++|++++..+++ + .+.+.++ +++++|.||+|+|++|++++ ++.+++..+ +|+|.||+++
T Consensus 229 ~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~ 306 (476)
T 3lad_A 229 KILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYC 306 (476)
T ss_dssp HHHHHTTEEEEETCEEEEEEECSSC-E-EEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTS
T ss_pred HHHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCc
Confidence 9999999999999999999865333 3 3555544 67999999999999999874 677888876 5779999999
Q ss_pred CCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCCCCceeeeccccCCCCcceeeEEeec
Q 010917 340 RTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGD 418 (497)
Q Consensus 340 ~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~-~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~ 418 (497)
+|+.|+|||+|||+..+. .+..|..||+.+|.+|++... .+|..+|+. . |..+ .+..+|.
T Consensus 307 ~t~~~~Iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~--~-~~~~------~~a~vGl 367 (476)
T 3lad_A 307 ATSVPGVYAIGDVVRGAM----------LAHKASEEGVVVAERIAGHKAQMNYDLIPAV--I-YTHP------EIAGVGK 367 (476)
T ss_dssp BCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHHHCCCCCCTTCCCEE--E-CSSS------EEEEEEC
T ss_pred ccCCCCEEEEEccCCCcc----------cHHHHHHHHHHHHHHhcCCCcccCCCCCCEE--E-ECcC------CEEEeeC
Confidence 999999999999996442 456699999999999997542 245556653 2 3221 1455665
Q ss_pred CCCc------EEEEcc-------------CCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC-h-hhh
Q 010917 419 NVGE------TIEIGN-------------FDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKL 474 (497)
Q Consensus 419 ~~~~------~~~~~~-------------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~ 474 (497)
...+ -+..+. ....+.|+.++ +++|+|+++++.++.++... ..+++.+.+++ . ..+
T Consensus 368 te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~ 447 (476)
T 3lad_A 368 TEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMV 447 (476)
T ss_dssp CHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSC
T ss_pred CHHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCc
Confidence 4321 011110 12357777765 48999999988877776544 45678888876 3 335
Q ss_pred cCCCcHHHHHHHHHccCCcc
Q 010917 475 QQASSVEEALEIARAALPVE 494 (497)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~ 494 (497)
+.|||++|+++.|++++..+
T Consensus 448 ~~hPt~~e~~~~~~~~~~~~ 467 (476)
T 3lad_A 448 FAHPALSEALHEAALAVSGH 467 (476)
T ss_dssp CCSSCSHHHHHHHHHHHTTC
T ss_pred cCCCChHHHHHHHHHHHhcc
Confidence 88999999999999876543
No 39
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.6e-42 Score=354.80 Aligned_cols=392 Identities=18% Similarity=0.285 Sum_probs=271.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---CC--C------------CccccCCCCCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---PA--L------------TKGYLFPLDKKPAR 119 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~~--l------------~~~~l~~~~~~~~~ 119 (497)
.++||+|||||+||++||..|++.|+ +|+|||++....- .. |. + ...+-........+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGK---RVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLD 79 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCC---cEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcC
Confidence 35799999999999999999999987 8999999742100 00 00 0 00000000000000
Q ss_pred CCCCccccC---CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCc
Q 010917 120 LPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG 196 (497)
Q Consensus 120 ~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~g 196 (497)
+..+..... ..+...+...+++.+++++.+ ++..++ .+++.+ +++++.||+||+|||+.|.. |.++|. +
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~-~g~~~~~d~lviAtGs~p~~-p~i~G~--~- 151 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVD--AHTIEV-EGQRLSADHIVIATGGRPIV-PRLPGA--E- 151 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEE-TTEEEEEEEEEECCCEEECC-CSCTTG--G-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEcc--CCEEEE-CCEEEEcCEEEECCCCCCCC-CCCCCc--c-
Confidence 000000000 000000123346679999987 555565 357777 67789999999999998874 444442 1
Q ss_pred EEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEE
Q 010917 197 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 276 (497)
Q Consensus 197 v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~ 276 (497)
.+. +.+.+......+++++|||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.+++.||+++
T Consensus 152 --~~~---~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~ 225 (463)
T 2r9z_A 152 --LGI---TSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLAENMHAQGIETH 225 (463)
T ss_dssp --GSB---CHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEE
T ss_pred --cee---cHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEE
Confidence 122 23344443446799999999999999999999999999999999998875 899999999999999999999
Q ss_pred cCCeEEEEEeCCCCcEEEEEeCCCc-EEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcEEEeccc
Q 010917 277 KGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDV 352 (497)
Q Consensus 277 ~~~~v~~i~~~~~~~v~~v~~~~g~-~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~ 352 (497)
++++|++++..+++ ..+.+.+|+ ++++|.||+|+|++|++++ +++++++.+ +|+|.||++++|+.|+|||+|||
T Consensus 226 ~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~ 303 (463)
T 2r9z_A 226 LEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALGDI 303 (463)
T ss_dssp SSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECGGG
T ss_pred eCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEeec
Confidence 99999999864333 467888998 8999999999999999873 577888875 67799999999999999999999
Q ss_pred cccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC---CCCCCCCceeeeccccCCCCcceeeEEeecCCC--------
Q 010917 353 AAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------- 421 (497)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~---~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~-------- 421 (497)
+..+. .+..|..||+.+|.||++... ..|..+|+. .|..+. +..+|....
T Consensus 304 ~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~---~~~~~~------~a~vGl~e~~a~~~~g~ 364 (463)
T 2r9z_A 304 TGRDQ----------LTPVAIAAGRRLAERLFDGQSERKLDYDNIPTV---VFAHPP------LSKVGLSEPEARERLGD 364 (463)
T ss_dssp GTSCC----------CHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEE---ECCSSC------EEEEECCHHHHHHHHCS
T ss_pred CCCcc----------cHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEE---EeCCCC------eEEEcCCHHHHHhcCCC
Confidence 86432 566799999999999997542 345666653 222111 344453211
Q ss_pred cEEE-E-----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC-h-hhhcCCCcHHHHH
Q 010917 422 ETIE-I-----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEAL 484 (497)
Q Consensus 422 ~~~~-~-----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~ 484 (497)
.+.. . ......+.+++++ +++|+|+++++..+.++... ..+++.+.+++ . ..++.|||++|++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 444 (463)
T 2r9z_A 365 VLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEEL 444 (463)
T ss_dssp CEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGG
T ss_pred CEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHH
Confidence 1111 0 1112447788775 58999999877767665544 45678888776 2 3368999999998
Q ss_pred HHHH
Q 010917 485 EIAR 488 (497)
Q Consensus 485 ~~~~ 488 (497)
+.++
T Consensus 445 ~~~~ 448 (463)
T 2r9z_A 445 VTLK 448 (463)
T ss_dssp GCCC
T ss_pred HHHH
Confidence 8754
No 40
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=5.1e-42 Score=353.09 Aligned_cols=395 Identities=19% Similarity=0.224 Sum_probs=273.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---C--------------CCCccccCCCCCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---P--------------ALTKGYLFPLDKKPAR 119 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~--------------~l~~~~l~~~~~~~~~ 119 (497)
.++||+||||||||++||..|++.|+ +|+|||++....- .. | .....+.........+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~---~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGA---RAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFN 95 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 45899999999999999999999998 8999998742100 00 0 0000000000000000
Q ss_pred CCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCC--CCCCCCC
Q 010917 120 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGGYL 194 (497)
Q Consensus 120 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~--~~~g~~~ 194 (497)
+....... ...+.......+++.+++++.+ ++..++.....+. .+++++.||+||||||+.|..++ .++|.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~- 172 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS- 172 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc-
Confidence 00000000 0000001122345679999886 5666666666776 46677999999999999887431 444422
Q ss_pred CcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcE
Q 010917 195 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 274 (497)
Q Consensus 195 ~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 274 (497)
.. .+++.+......+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+++.||+
T Consensus 173 ----~~---~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~~~~~l~~~gv~ 244 (478)
T 3dk9_A 173 ----LG---ITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-FDSMISTNCTEELENAGVE 244 (478)
T ss_dssp ----GS---BCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCE
T ss_pred ----ee---EchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-cCHHHHHHHHHHHHHCCCE
Confidence 11 224444444446799999999999999999999999999999999998864 8999999999999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEeCC---C----cEEEcCEEEEeccCcCCCc-c-hhhcCCccc-CCCEEecCCCCCCCC
Q 010917 275 FVKGASIKNLEAGSDGRVAAVKLED---G----STIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMP 344 (497)
Q Consensus 275 i~~~~~v~~i~~~~~~~v~~v~~~~---g----~~i~~D~vv~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~~~ 344 (497)
+++++.+++++..+++....+.+.+ | +++++|.||+|+|++|+++ + ++.+|++.+ +|+|.||++++|+.|
T Consensus 245 i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~ 324 (478)
T 3dk9_A 245 VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVK 324 (478)
T ss_dssp EETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCSST
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccCCC
Confidence 9999999999876555233566665 2 5799999999999999987 4 788898875 678999999999999
Q ss_pred cEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC---CCCCCCCCceeeeccccCCCCcceeeEEeecCCC
Q 010917 345 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ---THTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 421 (497)
Q Consensus 345 ~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~---~~~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~ 421 (497)
+|||+|||+..+. .+..|..||+.+|.+|++.. ...|..+|+. .|..+ .+..+|....
T Consensus 325 ~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~---~~~~p------~~a~vGlte~ 385 (478)
T 3dk9_A 325 GIYAVGDVCGKAL----------LTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTV---VFSHP------PIGTVGLTED 385 (478)
T ss_dssp TEEECGGGGCSSC----------CHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEE---ECCSS------CEEEEECCHH
T ss_pred CEEEEEecCCCCc----------cHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeE---EECCC------ceEEeeCCHH
Confidence 9999999995432 45679999999999999752 2345666652 33321 1445554432
Q ss_pred c---------EE-EEc-----------cCCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC--hhhhc
Q 010917 422 E---------TI-EIG-----------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD--KAKLQ 475 (497)
Q Consensus 422 ~---------~~-~~~-----------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~ 475 (497)
+ +. ... +....+.|+.++ +++|+|+++++.++.++... ..+++.+.+++ ...++
T Consensus 386 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~ 465 (478)
T 3dk9_A 386 EAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVA 465 (478)
T ss_dssp HHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCC
T ss_pred HHHhhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhccc
Confidence 1 11 100 012347777765 48999999987777776544 55678888876 34469
Q ss_pred CCCcHHHHHHH
Q 010917 476 QASSVEEALEI 486 (497)
Q Consensus 476 ~~~~~~~~~~~ 486 (497)
.|||++|++..
T Consensus 466 ~hPt~~e~~~~ 476 (478)
T 3dk9_A 466 IHPTSSEELVT 476 (478)
T ss_dssp CSSSSGGGGGS
T ss_pred CCCChHHHHHh
Confidence 99999998864
No 41
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.3e-41 Score=344.69 Aligned_cols=395 Identities=16% Similarity=0.229 Sum_probs=270.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--CCCCCC-Ccccc-----------------CCC--CCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--YERPAL-TKGYL-----------------FPL--DKKP 117 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~--~~~~~l-~~~~l-----------------~~~--~~~~ 117 (497)
++||+|||||+||++||..|++.|+ +|+|||++.... ...... ++.++ ++. ....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~ 81 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGI---PTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPR 81 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---EEEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCc
Confidence 4799999999999999999999987 899999953210 000000 00000 000 0000
Q ss_pred CCCCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC
Q 010917 118 ARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL 194 (497)
Q Consensus 118 ~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~ 194 (497)
.++..+.... ...+......++++.+++++.++.+. ++ .+++.+++ +.+.||+||||||+.|..+|.++. +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~-~- 155 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD--GKQVEVDG-QRIQCEHLLLATGSSSVELPMLPL-G- 155 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE--TTEEEETT-EEEECSEEEECCCEEECCBTTBCC-B-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCc-c-
Confidence 0000000000 00000001245677899999875543 44 46788876 779999999999999875442331 1
Q ss_pred CcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcE
Q 010917 195 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 274 (497)
Q Consensus 195 ~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 274 (497)
..+. + ..........+++++|||+|++|+|+|..|++.|.+|+++++.+.+++ .+++++.+.+.+.+++.||+
T Consensus 156 ~~v~---~---~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~ 228 (458)
T 1lvl_A 156 GPVI---S---STEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-TYDSELTAPVAESLKKLGIA 228 (458)
T ss_dssp TTEE---C---HHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCE
T ss_pred CcEe---c---HHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCE
Confidence 1222 2 333333233579999999999999999999999999999999999987 48999999999999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEeccCcCCCcc--hhhcCCcccCCCEEecCCCCCCCCcEEEec
Q 010917 275 FVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSP--FERVGLNSSVGGIQVDGQFRTRMPGIFAIG 350 (497)
Q Consensus 275 i~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~~g~i~vd~~~~t~~~~iya~G 350 (497)
++++++|++++. +.+ .+...+| +++++|.||+|+|++|++++ ++++|+..++++|.||++++|+.|+|||+|
T Consensus 229 i~~~~~v~~i~~---~~v-~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~Iya~G 304 (458)
T 1lvl_A 229 LHLGHSVEGYEN---GCL-LANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNVWAIG 304 (458)
T ss_dssp EETTCEEEEEET---TEE-EEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTEEECG
T ss_pred EEECCEEEEEEe---CCE-EEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCEEEee
Confidence 999999999984 222 3444456 68999999999999999886 578888875338999999999999999999
Q ss_pred cccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeeccccCCCCcceeeEEeecCCC-------
Q 010917 351 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------- 421 (497)
Q Consensus 351 D~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~------- 421 (497)
||+..+. .+..|..||+.+|.+|++. ..+ |..+|++ ..++.. +..+|....
T Consensus 305 D~~~~~~----------~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~~--~~~~p~-------~a~vG~~e~~a~~~g~ 364 (458)
T 1lvl_A 305 DVAGEPM----------LAHRAMAQGEMVAEIIAGK-ARRFEPAAIAAV--CFTDPE-------VVVVGKTPEQASQQGL 364 (458)
T ss_dssp GGGCSSC----------CHHHHHHHHHHHHHHHTTC-CCCCCCSCCCEE--ECSSSE-------EEEEECCHHHHHHTTC
T ss_pred ccCCCcc----------cHHHHHHHHHHHHHHhcCC-CccCCCCCCCEE--EECCCC-------eEEEeCCHHHHHHcCC
Confidence 9998542 4567999999999999963 333 4445542 222211 334443221
Q ss_pred cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeecCChHH-hhHHHHHHhCCCCCC--hhhhcCCCcHHHHH
Q 010917 422 ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVD--KAKLQQASSVEEAL 484 (497)
Q Consensus 422 ~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 484 (497)
.+.. . ......+.+++++ +++|+|+++++..+.+ +..+..+++.+.+++ ...++.|||++|++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~ 444 (458)
T 1lvl_A 365 DCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAV 444 (458)
T ss_dssp CEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHHH
T ss_pred CEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHH
Confidence 1111 0 0112457888875 5999999986666555 445566788888876 23368899999999
Q ss_pred HHHHccCCcc
Q 010917 485 EIARAALPVE 494 (497)
Q Consensus 485 ~~~~~~~~~~ 494 (497)
..|++++..+
T Consensus 445 ~~a~~~~~~~ 454 (458)
T 1lvl_A 445 QEAALRALGH 454 (458)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhcc
Confidence 9998765443
No 42
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=3.7e-41 Score=344.52 Aligned_cols=397 Identities=19% Similarity=0.264 Sum_probs=272.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---CCC-Ccccc---------------CCCCCCCCCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---PAL-TKGYL---------------FPLDKKPARLP 121 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~---~~l-~~~~l---------------~~~~~~~~~~~ 121 (497)
+||+||||||||++||..|++.|+ +|+|||+++...... ... ++.++ ........++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGM---KVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLP 78 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCC---eEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHH
Confidence 689999999999999999999987 899999986432100 000 00000 00000000000
Q ss_pred CCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEEC-CCcEEEeccEEeccCCCCCcCCCCCCCCCCcE
Q 010917 122 GFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGV 197 (497)
Q Consensus 122 ~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv 197 (497)
.+.... .......+..++++.+++++.++. ..++ .+.+.+. +|.++.||+||+|||+.|.. |+.++.+..++
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~-~~i~--~~~~~v~~~g~~~~~d~lviAtG~~p~~-~~~~g~~~~~v 154 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGTA-RFLS--ERKVLVEETGEELEARYILIATGSAPLI-PPWAQVDYERV 154 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCE-EESS--SSEEEETTTCCEEEEEEEEECCCEEECC-CTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEec--CCeEEEeeCCEEEEecEEEECCCCCCCC-CCCCCCCcCcE
Confidence 000000 000000013455667999998754 3344 3445443 56789999999999998864 44445333333
Q ss_pred EEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEc
Q 010917 198 HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 277 (497)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~ 277 (497)
.+ .+.+......+++++|||+|++|+|+|..|++.|.+|+++++.+.+++. +++++.+.+.+.+++.||++++
T Consensus 155 ~~------~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~ 227 (455)
T 2yqu_A 155 VT------STEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKKQGLTIRT 227 (455)
T ss_dssp EC------HHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHHTCEEEC
T ss_pred ec------hHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHHHHHHHHHHHHCCCEEEE
Confidence 32 2333332335799999999999999999999999999999999998874 7899999999999999999999
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcEEEeccccc
Q 010917 278 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAA 354 (497)
Q Consensus 278 ~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~ 354 (497)
+++|++++..+ +. ..+.+.+|+++++|.||+|+|.+|+.++ ++.+++..+ +|++.||++++|+.|+|||+|||+.
T Consensus 228 ~~~V~~i~~~~-~~-v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~~ 305 (455)
T 2yqu_A 228 GVRVTAVVPEA-KG-ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVVR 305 (455)
T ss_dssp SCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGSS
T ss_pred CCEEEEEEEeC-CE-EEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCCC
Confidence 99999998643 22 3567778889999999999999999887 678888865 4779999999999999999999997
Q ss_pred cCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCCCCceeeeccccCCCCcceeeEEeecCCC-------cEEE
Q 010917 355 FPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE 425 (497)
Q Consensus 355 ~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~--~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~-------~~~~ 425 (497)
.+. .+..|..||+.+|.+|++. ... +...|+ ...++.. +..+|.... ++..
T Consensus 306 ~~~----------~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~--~~~~~~~-------~a~~G~~~~~a~~~g~~~~~ 365 (455)
T 2yqu_A 306 GPM----------LAHKASEEGIAAVEHMVRG-FGHVDYQAIPS--VVYTHPE-------IAAVGYTEEELKAQGIPYKV 365 (455)
T ss_dssp SCC----------CHHHHHHHHHHHHHHHHHS-CCCCCGGGCCE--EECSSSE-------EEEEECCHHHHHHHTCCEEE
T ss_pred Ccc----------CHHHHHHhHHHHHHHHcCC-CccCCCCCCCE--EEEcCCc-------eEEEECCHHHHHHcCCCEEE
Confidence 542 4556999999999999974 233 333453 2222221 344453321 1111
Q ss_pred -E-----------ccCCCcEEEEEEE--CCEEEEEEeecCChHHhh-HHHHHHhCCCCCC--hhhhcCCCcHHHHHHHHH
Q 010917 426 -I-----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD--KAKLQQASSVEEALEIAR 488 (497)
Q Consensus 426 -~-----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 488 (497)
. ......+.+++++ +++|+|+++++..+.++. .+..+++++.+++ ....+.|||++|++..|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~ 445 (455)
T 2yqu_A 366 GKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAA 445 (455)
T ss_dssp EEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHH
T ss_pred EEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHH
Confidence 0 0112457788875 699999998666655544 5556688888887 234688999999999998
Q ss_pred ccCCc
Q 010917 489 AALPV 493 (497)
Q Consensus 489 ~~~~~ 493 (497)
+++..
T Consensus 446 ~~~~~ 450 (455)
T 2yqu_A 446 LAAWE 450 (455)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 76543
No 43
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-41 Score=347.28 Aligned_cols=396 Identities=20% Similarity=0.284 Sum_probs=278.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---CC--------------CCccccCCCCCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---PA--------------LTKGYLFPLDKKPAR 119 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~~--------------l~~~~l~~~~~~~~~ 119 (497)
.++||+|||||++|++||..|+++|+ +|+|||++....- .. |. ....+.........+
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~---~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGK---KVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFD 80 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcC
Confidence 35799999999999999999999998 8999999431100 00 00 000000000000000
Q ss_pred CCCCcccc---CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEE-CCCcEEEeccEEeccCCCCCcCCCCCCCCCC
Q 010917 120 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT-NSGKLLKYGSLIVATGCTASRFPEKIGGYLP 195 (497)
Q Consensus 120 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~-~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~ 195 (497)
+....... .......+..++++.+++++.+ ++..++ .+.+.+ ++++.+.||++|+|||+.|...|.++|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~-- 155 (463)
T 4dna_A 81 WAKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHE-- 155 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGG--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCcc--
Confidence 00000000 0000011223455679999886 565554 467777 57788999999999999876234444422
Q ss_pred cEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEE
Q 010917 196 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 275 (497)
Q Consensus 196 gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i 275 (497)
... +.+.+......+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||++
T Consensus 156 ---~~~---~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i 228 (463)
T 4dna_A 156 ---LCI---TSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDMRRGLHAAMEEKGIRI 228 (463)
T ss_dssp ---GCB---CHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEE
T ss_pred ---ccc---cHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEE
Confidence 222 23444443456899999999999999999999999999999999998864 89999999999999999999
Q ss_pred EcCCeEEEEEeCCCCcEEEEE-eCCCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcEEEecc
Q 010917 276 VKGASIKNLEAGSDGRVAAVK-LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGD 351 (497)
Q Consensus 276 ~~~~~v~~i~~~~~~~v~~v~-~~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD 351 (497)
++++.|++++..+++. ..+. +.+|+ +++|.||+|+|++|++.+ ++++|++.+ +|+|.||++++|+.|+|||+||
T Consensus 229 ~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~GD 306 (463)
T 4dna_A 229 LCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGD 306 (463)
T ss_dssp ECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSG
T ss_pred ECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEEEe
Confidence 9999999998754444 3677 88888 999999999999999987 788898876 5779999999999999999999
Q ss_pred ccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccccCCCCcceeeEEeecCCCc-------
Q 010917 352 VAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------- 422 (497)
Q Consensus 352 ~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~------- 422 (497)
|+..+. .+..|..||+.+|.||++.... .+..+|+. .|..+ .+..+|....+
T Consensus 307 ~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p------~~a~vG~te~~a~~~~~~ 367 (463)
T 4dna_A 307 VTDRVQ----------LTPVAIHEAMCFIETEYKNNPTSPDHDLIATA---VFSQP------EIGTVGITEEEAARKFQE 367 (463)
T ss_dssp GGSSCC----------CHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEE---ECSSS------CEEEEECCHHHHHHHSSE
T ss_pred cCCCCC----------ChHHHHHHHHHHHHHHcCCCCcccCCCCCCEE---EECCC------CeEEecCCHHHHHHcCCC
Confidence 998432 5567999999999999975433 45556653 33322 15556654321
Q ss_pred E-EEEcc-----------CCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC-h-hhhcCCCcHHHHHH
Q 010917 423 T-IEIGN-----------FDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEALE 485 (497)
Q Consensus 423 ~-~~~~~-----------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 485 (497)
+ +.... ....+.|+.++ +++|+|+++++.++.++... ..+++.+.+++ . ..++.|||++|+++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 447 (463)
T 4dna_A 368 IEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELV 447 (463)
T ss_dssp EEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGT
T ss_pred eEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHH
Confidence 1 11111 12347777775 48999999988877776654 45678888876 3 44699999999999
Q ss_pred HHHcc
Q 010917 486 IARAA 490 (497)
Q Consensus 486 ~~~~~ 490 (497)
+++..
T Consensus 448 ~~~~~ 452 (463)
T 4dna_A 448 TMYQP 452 (463)
T ss_dssp CCCSC
T ss_pred HHhhh
Confidence 88743
No 44
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=2.4e-40 Score=341.20 Aligned_cols=398 Identities=19% Similarity=0.241 Sum_probs=271.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCcc----------------------------cc
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKG----------------------------YL 110 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~----------------------------~l 110 (497)
.++||+||||||||++||..|++.|+ +|+|||+.+..++......++ +-
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g 81 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGK---KVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYG 81 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 35899999999999999999999998 899999843322211000000 00
Q ss_pred CCCC-CCCCCCCCCccccC---CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC--cEEEeccEEeccCCCCC
Q 010917 111 FPLD-KKPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTAS 184 (497)
Q Consensus 111 ~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lvlAtG~~~~ 184 (497)
.... ....++........ ..........+++.+++++.+ ++..++.....+.+.+| .++.||+||||||+.|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 0000 00000000000000 000000112345678998864 56666655556666666 47999999999999987
Q ss_pred cCCC-CCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHH
Q 010917 185 RFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 263 (497)
Q Consensus 185 ~~~~-~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~ 263 (497)
. |. ++|..... . +++.+......+++++|||+|++|+|+|..|+++|.+|+++++.. +++ .+++++.+.
T Consensus 161 ~-p~~i~G~~~~~----~---~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l~-~~d~~~~~~ 230 (488)
T 3dgz_A 161 Y-PTQVKGALEYG----I---TSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PLR-GFDQQMSSL 230 (488)
T ss_dssp C-CSSCBTHHHHC----B---CHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SST-TSCHHHHHH
T ss_pred C-CCCCCCccccc----C---cHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-ccc-cCCHHHHHH
Confidence 4 43 55532111 1 233444434467899999999999999999999999999999874 554 379999999
Q ss_pred HHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC---Cc--EEEcCEEEEeccCcCCCcc--hhhcCCccc--CCCEE
Q 010917 264 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGGIQ 334 (497)
Q Consensus 264 ~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i~~D~vv~a~G~~p~~~~--~~~~gl~~~--~g~i~ 334 (497)
+.+.++++||++++++.+.+++..+++.+ .+.+.+ |+ ++++|.||+|+|++|++++ ++.+++..+ +|+|.
T Consensus 231 l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~ 309 (488)
T 3dgz_A 231 VTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKII 309 (488)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEe
Confidence 99999999999999999999986544443 344433 54 5899999999999999987 678888875 67899
Q ss_pred ecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccccCCCCccee
Q 010917 335 VDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVW 412 (497)
Q Consensus 335 vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~ 412 (497)
||+++||+.|+|||+|||+.... ..+..|..||+.+|.||++.... .|..+|+.+ |..+ .
T Consensus 310 vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~---~~~p------~ 371 (488)
T 3dgz_A 310 VDAQEATSVPHIYAIGDVAEGRP---------ELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTV---FTPL------E 371 (488)
T ss_dssp CCTTSBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEE---CSSS------E
T ss_pred ECCCCccCCCCEEEeEEecCCCC---------cchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEE---ECCC------C
Confidence 99999999999999999985221 15567999999999999975432 456677643 2221 1
Q ss_pred eEEeecCCCc---------E-EEEccC------------CCcEEEEEEE---CCEEEEEEeecCChHHhhHH-HHHHhCC
Q 010917 413 WQFFGDNVGE---------T-IEIGNF------------DPKIATFWID---SGKLKGVLVESGSPEEFQLL-PTLARSQ 466 (497)
Q Consensus 413 ~~~~g~~~~~---------~-~~~~~~------------~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~-~~~~~~~ 466 (497)
+..+|....+ + +....+ ...+.|+.++ +++|+|+++++.++.++... ..+|+.+
T Consensus 372 ~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~ 451 (488)
T 3dgz_A 372 YGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCG 451 (488)
T ss_dssp EEEEECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTT
T ss_pred eEEEeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 4455544310 1 111000 2457777775 48999999988777776544 4567888
Q ss_pred CCCC--hhhhcCCCcHHHHHHHHHc
Q 010917 467 PFVD--KAKLQQASSVEEALEIARA 489 (497)
Q Consensus 467 ~~~~--~~~~~~~~~~~~~~~~~~~ 489 (497)
.+++ ...++.|||++|++..+..
T Consensus 452 ~t~~~l~~~~~~hPt~~e~~~~~~~ 476 (488)
T 3dgz_A 452 ASYAQVMQTVGIHPTCSEEVVKLHI 476 (488)
T ss_dssp CBHHHHHTSCCCSSCSTHHHHTCCE
T ss_pred CCHHHHhccccCCCChHHHHHHHHH
Confidence 8886 3446999999999998754
No 45
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.6e-41 Score=348.25 Aligned_cols=390 Identities=17% Similarity=0.145 Sum_probs=269.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------------------CCCCCCccccCCCCCCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------------------ERPALTKGYLFPLDKKPARL 120 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-------------------~~~~l~~~~l~~~~~~~~~~ 120 (497)
++||+||||||||++||..|++.|+ +|+|||+++...- +.......+-........++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~---~V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTD---KVVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCS---CEEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCH
Confidence 4799999999999999999999998 8999999752100 00000000000000000000
Q ss_pred CCCccccCCCCCCCCH-----------hHHHHc-CcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCC
Q 010917 121 PGFHTCVGSGGERQTP-----------EWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPE 188 (497)
Q Consensus 121 ~~~~~~~~~~~~~~~~-----------~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~ 188 (497)
. . ...+.. ..+... +++++.+ +..-. +.+++.+++++++.||+||||||+.|.. |.
T Consensus 85 ~---~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g-~a~~~--~~~~v~~~~~~~~~~d~lViATGs~p~~-p~ 152 (492)
T 3ic9_A 85 K---A-----VMKRIQTERDRFVGFVVESVESFDEQDKIRG-FAKFL--DEHTLQVDDHSQVIAKRIVIATGSRPNY-PE 152 (492)
T ss_dssp H---H-----HHHHHHHHHHHHHHHHHHHHHHSCGGGEEES-CEEEE--ETTEEEETTTEEEEEEEEEECCCEECCC-CH
T ss_pred H---H-----HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEE-EEEEe--cCCEEEEcCCcEEEeCEEEEccCCCCcC-CC
Confidence 0 0 000000 111111 3445543 33323 3568888888899999999999999874 44
Q ss_pred CCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHH
Q 010917 189 KIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY 268 (497)
Q Consensus 189 ~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l 268 (497)
.++...+.+.+ ++.+......+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++++.+.+.+.+
T Consensus 153 ~~~~~~~~v~t------~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l 225 (492)
T 3ic9_A 153 FLAAAGSRLLT------NDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEMKRYAEKTF 225 (492)
T ss_dssp HHHTTGGGEEC------HHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHHHHHHHHHH
T ss_pred CCCccCCcEEc------HHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHHHHHHHHHH
Confidence 33332333332 3444444456899999999999999999999999999999999999864 7999999999999
Q ss_pred HHCCcEEEcCCeEEEEEeCCCCcEEEEEeC--CC--cEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEec-CCCC
Q 010917 269 QQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVD-GQFR 340 (497)
Q Consensus 269 ~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~--~g--~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd-~~~~ 340 (497)
++. |++++++++++++..++ .+ .+.+. +| +++++|.||+|+|++|++++ ++.++++.+ +|++.|| ++++
T Consensus 226 ~~~-V~i~~~~~v~~i~~~~~-~v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~ 302 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEKED-AV-EVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQ 302 (492)
T ss_dssp HTT-SEEETTCEEEEEEECSS-SE-EEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCB
T ss_pred hhC-cEEEECCEEEEEEEcCC-EE-EEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECccccc
Confidence 988 99999999999986533 33 35553 67 68999999999999999988 788899876 6779999 8999
Q ss_pred CCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC-CC--CCCCCCceeeeccccCCCCcceeeEEee
Q 010917 341 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ-TH--TYDYLPYFYSRVFEYEGSPRKVWWQFFG 417 (497)
Q Consensus 341 t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~-~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g 417 (497)
|+.|+|||+|||+..+. .+..|..||+.+|.+|++.. .. .+..+|+ ..|..+ .+..+|
T Consensus 303 t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~---~~~~~p------~~a~vG 363 (492)
T 3ic9_A 303 TSVDHIFVAGDANNTLT----------LLHEAADDGKVAGTNAGAYPVIAQGQRRAPLS---VVFTEP------QVASVG 363 (492)
T ss_dssp CSSTTEEECGGGGTSSC----------SHHHHHHHHHHHHHHHHHTTSCCEECCCCCEE---EECSSS------EEEEEE
T ss_pred CCCCCEEEEEecCCCCc----------cHHHHHHHHHHHHHHHcCCCCCcccCCCCCcE---EEECCC------CeEEec
Confidence 99999999999997542 45679999999999999732 22 3344443 223211 144455
Q ss_pred cCCCc------------E-EEEcc-----------CCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC
Q 010917 418 DNVGE------------T-IEIGN-----------FDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD 470 (497)
Q Consensus 418 ~~~~~------------~-~~~~~-----------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ 470 (497)
....+ . +..-. ....+.++.++ +++|+|+++++.++.++... ..+++.+.+++
T Consensus 364 lte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~ 443 (492)
T 3ic9_A 364 LSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQ 443 (492)
T ss_dssp SCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHH
T ss_pred CCHHHHHhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 43211 1 11111 12357777775 48999999988888776654 45678888876
Q ss_pred -h-hhhcCCCcHHHHHHHHHccCCc
Q 010917 471 -K-AKLQQASSVEEALEIARAALPV 493 (497)
Q Consensus 471 -~-~~~~~~~~~~~~~~~~~~~~~~ 493 (497)
. ..++.|||++|+++.|++++..
T Consensus 444 ~l~~~~~~hPt~~e~~~~a~~~~~~ 468 (492)
T 3ic9_A 444 AMLTMPFYHPVIEEGLRTALRDAQQ 468 (492)
T ss_dssp HHTTSCCCTTCTHHHHHHHHHHHHH
T ss_pred HHhhCCCCCCChHHHHHHHHHHHHH
Confidence 2 4458999999999999887544
No 46
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=1.6e-40 Score=342.27 Aligned_cols=398 Identities=19% Similarity=0.219 Sum_probs=271.0
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC-------CCCCCCC----------------------cc
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-------YERPALT----------------------KG 108 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~-------~~~~~l~----------------------~~ 108 (497)
...+||+||||||||++||..|++.|+ +|+|||+....+ +....+. ..
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~ 83 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGA---RVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAA 83 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---EEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHh
Confidence 346899999999999999999999998 899999532111 0000000 00
Q ss_pred ccCCCCC-CCCCCCCCccccC---CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCc-EEEeccEEeccCCCC
Q 010917 109 YLFPLDK-KPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK-LLKYGSLIVATGCTA 183 (497)
Q Consensus 109 ~l~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~-~i~~d~lvlAtG~~~ 183 (497)
+-..... ...++..+..... ..........++..+++++.+ .+..++.....+.+.+|. .+.||+||||||+.|
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p 162 (483)
T 3dgh_A 84 YGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRP 162 (483)
T ss_dssp TTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEE
T ss_pred cCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCc
Confidence 0000000 0000000000000 000000112345678998875 566666655566666664 799999999999988
Q ss_pred CcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHH
Q 010917 184 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 263 (497)
Q Consensus 184 ~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~ 263 (497)
.. |.++|.+.. . .+++.+......+++++|||+|++|+|+|..|+++|.+|+++++. .+++. +++++.+.
T Consensus 163 ~~-p~i~G~~~~----~---~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~~~~ 232 (483)
T 3dgh_A 163 RY-PDIPGAVEY----G---ITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRG-FDQQMAEL 232 (483)
T ss_dssp CC-CSSTTHHHH----C---BCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSSTT-SCHHHHHH
T ss_pred CC-CCCCCcccc----c---CcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCcc-cCHHHHHH
Confidence 74 544443211 1 123344443446789999999999999999999999999999984 56654 79999999
Q ss_pred HHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc-----EEEcCEEEEeccCcCCCcch--hhcCCcccCCCEEec
Q 010917 264 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGLNSSVGGIQVD 336 (497)
Q Consensus 264 ~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~-----~i~~D~vv~a~G~~p~~~~~--~~~gl~~~~g~i~vd 336 (497)
+.+.++++||++++++.+.+++..+++.+ .+.+.+++ ++++|.||+|+|++|+++++ +.++++.++|+|.||
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~vd 311 (483)
T 3dgh_A 233 VAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVD 311 (483)
T ss_dssp HHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCCC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEEC
Confidence 99999999999999999999986545544 46665543 79999999999999999886 788888877889999
Q ss_pred CCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeeeccccCCCCcceeeE
Q 010917 337 GQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQ 414 (497)
Q Consensus 337 ~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p~~~~~~~~~~g~~~~~~~~ 414 (497)
++++|+.|+|||+|||+.... ..+..|..||+.+|.||++... ..|..+|+.+ |..+ .+.
T Consensus 312 ~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~---~~~p------~~a 373 (483)
T 3dgh_A 312 SQEATNVANIYAVGDIIYGKP---------ELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTV---FTPL------EYA 373 (483)
T ss_dssp TTCBCSSTTEEECSTTBTTSC---------CCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEE---CSSS------EEE
T ss_pred cCCccCCCCEEEEEcccCCCC---------ccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEEE---ECCC------ccE
Confidence 999999999999999985211 1556799999999999997543 2456677542 2211 144
Q ss_pred EeecCCCc---------EE-EEcc------------CCCcEEEEEEE---CCEEEEEEeecCChHHhhHH-HHHHhCCCC
Q 010917 415 FFGDNVGE---------TI-EIGN------------FDPKIATFWID---SGKLKGVLVESGSPEEFQLL-PTLARSQPF 468 (497)
Q Consensus 415 ~~g~~~~~---------~~-~~~~------------~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~ 468 (497)
.+|....+ +. .... ....+.|+.++ +++|+|+++++.++.++... ..+++.+.+
T Consensus 374 ~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t 453 (483)
T 3dgh_A 374 CVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLT 453 (483)
T ss_dssp EEECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCB
T ss_pred EEeCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCC
Confidence 45543210 11 1100 12347777664 48999999988777776544 456788888
Q ss_pred CC--hhhhcCCCcHHHHHHHHH
Q 010917 469 VD--KAKLQQASSVEEALEIAR 488 (497)
Q Consensus 469 ~~--~~~~~~~~~~~~~~~~~~ 488 (497)
++ ...++.|||++|++..+.
T Consensus 454 ~~~l~~~~~~hPt~~e~~~~~~ 475 (483)
T 3dgh_A 454 INTLINTVGIHPTTAEEFTRLA 475 (483)
T ss_dssp HHHHHTSCCCSSCSGGGGGGCC
T ss_pred HHHHhhcccCCCChHHHHHHHH
Confidence 86 344699999999998765
No 47
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=3.9e-41 Score=347.09 Aligned_cols=400 Identities=17% Similarity=0.198 Sum_probs=253.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCcc------------ccC----------CCC---
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKG------------YLF----------PLD--- 114 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~------------~l~----------~~~--- 114 (497)
.|||+||||||||+.||..+++.|. +|+|||+.....+......+| ++. ...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~---kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGA---RVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC---CEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 4799999999999999999999998 899999865322111000000 000 000
Q ss_pred ----CCCCCCCCCccccC---CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEEC----CCcEEEeccEEeccCCCC
Q 010917 115 ----KKPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN----SGKLLKYGSLIVATGCTA 183 (497)
Q Consensus 115 ----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~----~g~~i~~d~lvlAtG~~~ 183 (497)
....++........ ..........+++.+|+++.+ ...-+++..-.+... +++.+.+|++|||||++|
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G-~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P 197 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYING-LAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRP 197 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECE-EEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-eEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCC
Confidence 00000000000000 000001123356679998875 444444433333332 335799999999999999
Q ss_pred CcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHH
Q 010917 184 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 263 (497)
Q Consensus 184 ~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~ 263 (497)
..+|.+++ ....+ .+++.++.....+++++|||||++|+|+|..++++|.+||++.+. ++++. +++++...
T Consensus 198 ~~P~~~~~-~~~~~------~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~L~~-~D~ei~~~ 268 (542)
T 4b1b_A 198 HIPDDVEG-AKELS------ITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVLRG-FDQQCAVK 268 (542)
T ss_dssp CCCSSSBT-HHHHC------BCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CSSTT-SCHHHHHH
T ss_pred CCCCcccC-CCccc------cCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-ccccc-cchhHHHH
Confidence 75433222 11111 235666666667899999999999999999999999999999875 56664 89999999
Q ss_pred HHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCC-EEecCCC
Q 010917 264 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGG-IQVDGQF 339 (497)
Q Consensus 264 ~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~-i~vd~~~ 339 (497)
+.+.|++.||+++++..+.+++..+ +. ..+.+.+++++.+|.|++|+|++||++. ++.+++..+ +++ +.+|+++
T Consensus 269 l~~~l~~~gi~~~~~~~v~~~~~~~-~~-~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~ 346 (542)
T 4b1b_A 269 VKLYMEEQGVMFKNGILPKKLTKMD-DK-ILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLS 346 (542)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTS
T ss_pred HHHHHHhhcceeecceEEEEEEecC-Ce-EEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccc
Confidence 9999999999999999999998653 33 3578889999999999999999999986 466777765 344 5789999
Q ss_pred CCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccccCCCCcceeeEEee
Q 010917 340 RTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFG 417 (497)
Q Consensus 340 ~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g 417 (497)
||+.|+|||+|||+..... ....|..+|+.++.++++.... .|..+|+. .|..+- +..+|
T Consensus 347 ~Ts~p~IyAiGDv~~~~p~---------La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~---vft~Pe------iA~VG 408 (542)
T 4b1b_A 347 CTNIPSIFAVGDVAENVPE---------LAPVAIKAGEILARRLFKDSDEIMDYSYIPTS---IYTPIE------YGACG 408 (542)
T ss_dssp BCSSTTEEECTTSBTTCCC---------CHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEE---ECSSSC------EEEEE
T ss_pred cccCCCeEEeccccCCchh---------HHHHHHHHHHHHHHHHhcCCCcccCCCCCceE---EeCCCC------eEEEe
Confidence 9999999999999964211 3345889999999999975543 46667763 343321 34444
Q ss_pred cCCCc---------E-EEEc--------------------------cCCCcEEEEEE-E--CCEEEEEEeecCChHHhhH
Q 010917 418 DNVGE---------T-IEIG--------------------------NFDPKIATFWI-D--SGKLKGVLVESGSPEEFQL 458 (497)
Q Consensus 418 ~~~~~---------~-~~~~--------------------------~~~~~~~~~~~-~--~~~~~g~~~~~~~~~~~~~ 458 (497)
....+ + +... .....|.++.. + +++|+|+++++.++.++..
T Consensus 409 lTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~ 488 (542)
T 4b1b_A 409 YSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQ 488 (542)
T ss_dssp CCHHHHHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHHH
T ss_pred CCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHH
Confidence 43210 0 0000 00124556553 3 4899999998888888775
Q ss_pred HHH-HHhCCCCCC--hhhhcCCCcHHHHHHHHHccCC
Q 010917 459 LPT-LARSQPFVD--KAKLQQASSVEEALEIARAALP 492 (497)
Q Consensus 459 ~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 492 (497)
.-. +|+.+.+++ ...++.|||++|+++++..++.
T Consensus 489 ~~alAi~~~~t~~dl~~~i~~HPTlsE~l~~~~~t~~ 525 (542)
T 4b1b_A 489 GMALALRLKVKKKDFDNCIGIHPTDAESFMNLFVTIS 525 (542)
T ss_dssp HHHHHHHTCCBHHHHHHC-------------------
T ss_pred HHHHHHHcCCCHHHHhccCCcCCCHHHHHHHHHHHHH
Confidence 544 578888876 3446999999999999877653
No 48
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.8e-40 Score=344.05 Aligned_cols=400 Identities=19% Similarity=0.238 Sum_probs=270.1
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccc-c-------------------------C
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGY-L-------------------------F 111 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~-l-------------------------~ 111 (497)
+..+||+||||||||++||..|++.|+ +|+|||+++..+........+. + +
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~ 106 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGK---KVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNY 106 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhc
Confidence 345899999999999999999999998 8999999652221100000000 0 0
Q ss_pred C--C-CCCCCCCCCCccccC---CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCc--EEEeccEEeccCCCC
Q 010917 112 P--L-DKKPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTA 183 (497)
Q Consensus 112 ~--~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~--~i~~d~lvlAtG~~~ 183 (497)
+ . .....++........ ..........++..+++++.+ .+..+++....+...+|+ ++.||+||||||+.|
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEE
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCc
Confidence 0 0 000000000000000 000000112345679999875 677778766667666664 799999999999988
Q ss_pred CcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHH
Q 010917 184 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 263 (497)
Q Consensus 184 ~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~ 263 (497)
.. |.++|... ... +.+.+......+++++|||+|++|+|+|..|+++|.+||++++. .+++. +++++.+.
T Consensus 186 ~~-p~i~G~~~----~~~---t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~-~d~~~~~~ 255 (519)
T 3qfa_A 186 RY-LGIPGDKE----YCI---SSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRG-FDQDMANK 255 (519)
T ss_dssp CC-CCCTTHHH----HCB---CHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHHHHH
T ss_pred CC-CCCCCccC----ceE---cHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccccc-CCHHHHHH
Confidence 74 44444211 111 23344443446788999999999999999999999999999985 56654 79999999
Q ss_pred HHHHHHHCCcEEEcCCeEEEEEeCCC---CcE-EEEEeCCC-c--EEEcCEEEEeccCcCCCcc--hhhcCCccc--CCC
Q 010917 264 YEQLYQQNGVKFVKGASIKNLEAGSD---GRV-AAVKLEDG-S--TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGG 332 (497)
Q Consensus 264 ~~~~l~~~GV~i~~~~~v~~i~~~~~---~~v-~~v~~~~g-~--~i~~D~vv~a~G~~p~~~~--~~~~gl~~~--~g~ 332 (497)
+.+.+++.||++++++.+++++..++ +.+ ..+...+| + ++++|.|++|+|++|++++ ++.++++.+ +|+
T Consensus 256 ~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~ 335 (519)
T 3qfa_A 256 IGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGK 335 (519)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCC
T ss_pred HHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCe
Confidence 99999999999999988887765322 322 22334555 2 5789999999999999986 678888874 578
Q ss_pred EEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccccCCCCcc
Q 010917 333 IQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRK 410 (497)
Q Consensus 333 i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~ 410 (497)
|.||+++||+.|+|||+|||+... ...+..|..||+.+|.||++.... .|..+|+. .|..+
T Consensus 336 I~Vd~~~~Ts~~~IyA~GD~~~g~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p----- 398 (519)
T 3qfa_A 336 IPVTDEEQTNVPYIYAIGDILEDK---------VELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTT---VFTPL----- 398 (519)
T ss_dssp BCCCTTSBCSSTTEEECGGGBSSS---------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE---ECSSS-----
T ss_pred EeeCCCCccCCCCEEEEEeccCCC---------CccHHHHHHHHHHHHHHHcCCCCccCCCCcCcEE---EECCC-----
Confidence 999999999999999999999422 125667999999999999975432 45556652 23221
Q ss_pred eeeEEeecCCCc---------EEE-Ec------------cCCCcEEEEEEE---CCEEEEEEeecCChHHhhH-HHHHHh
Q 010917 411 VWWQFFGDNVGE---------TIE-IG------------NFDPKIATFWID---SGKLKGVLVESGSPEEFQL-LPTLAR 464 (497)
Q Consensus 411 ~~~~~~g~~~~~---------~~~-~~------------~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~-~~~~~~ 464 (497)
.+..+|....+ +.. .. .....+.|+.++ +++|+|+++++.++.++.. +..+|+
T Consensus 399 -~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~ 477 (519)
T 3qfa_A 399 -EYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALK 477 (519)
T ss_dssp -CEEEEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred -ceEEecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 14556654321 111 10 012457787775 3899999987777766554 455678
Q ss_pred CCCCCC--hhhhcCCCcHHHHHHHHHc
Q 010917 465 SQPFVD--KAKLQQASSVEEALEIARA 489 (497)
Q Consensus 465 ~~~~~~--~~~~~~~~~~~~~~~~~~~ 489 (497)
.+.+++ ...++.|||++|+++++..
T Consensus 478 ~~~t~~~l~~~~~~hPt~~E~~~~~~~ 504 (519)
T 3qfa_A 478 CGLTKKQLDSTIGIHPVCAEVFTTLSV 504 (519)
T ss_dssp TTCBHHHHHHSCCCTTCGGGGGGGCCC
T ss_pred CCCCHHHHhccccCCCChHHHHHHHHh
Confidence 888886 3446999999999987653
No 49
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=7.6e-41 Score=344.58 Aligned_cols=395 Identities=21% Similarity=0.262 Sum_probs=275.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--CC---CC--------------CCccccCCCCCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ER---PA--------------LTKGYLFPLDKKPAR 119 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~--~~---~~--------------l~~~~l~~~~~~~~~ 119 (497)
.++||+|||||+||++||..|+++|+ +|+|||++....- .. |. ....+.........+
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 101 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGK---RVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFN 101 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcC---EEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 35799999999999999999999998 8999999531100 00 00 000000000000000
Q ss_pred CCCCccc---cCCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEEC-CCcEEEeccEEeccCCCCCcCCCCCCCCCC
Q 010917 120 LPGFHTC---VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLP 195 (497)
Q Consensus 120 ~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~ 195 (497)
+...... ............+++.+++++.+ .+..++ .+.+.+. ++..+.||++|+|||+.|...|.++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~-- 176 (484)
T 3o0h_A 102 WEKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--EHTLELSVTGERISAEKILIATGAKIVSNSAIKGSD-- 176 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGG--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--CCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc--
Confidence 0000000 00000011223456679999986 666666 4567776 7788999999999999876234444432
Q ss_pred cEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEE
Q 010917 196 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 275 (497)
Q Consensus 196 gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i 275 (497)
.+.+ .+.+......+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||++
T Consensus 177 ~~~~------~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i 249 (484)
T 3o0h_A 177 LCLT------SNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVAKGISI 249 (484)
T ss_dssp GSBC------TTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEE
T ss_pred cccc------HHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHHCCCEE
Confidence 1111 2222222345899999999999999999999999999999999998875 79999999999999999999
Q ss_pred EcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcc--hhhcCCccc-CCCEEecCCCCCCCCcEEEeccc
Q 010917 276 VKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDV 352 (497)
Q Consensus 276 ~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~ 352 (497)
++++.|++++..+ +.+ .+.+.+|+++++|.||+|+|++|+..+ ++.++++.+ +|+|.||++++|+.|+|||+|||
T Consensus 250 ~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~ 327 (484)
T 3o0h_A 250 IYEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDV 327 (484)
T ss_dssp ESSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGG
T ss_pred EeCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEEec
Confidence 9999999998653 344 688899999999999999999999987 678888876 57799999999999999999999
Q ss_pred cccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCCCCceeeeccccCCCCcceeeEEeecCCCc-------E
Q 010917 353 AAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T 423 (497)
Q Consensus 353 ~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~--~~~~~p~~~~~~~~~~g~~~~~~~~~~g~~~~~-------~ 423 (497)
+..+. .+..|..||+.+|.+|++.... .|..+|+. .|..+ .+..+|....+ +
T Consensus 328 ~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~---~~~~p------~~a~vGlte~~a~~~g~~~ 388 (484)
T 3o0h_A 328 TGHIQ----------LTPVAIHDAMCFVKNAFENTSTTPDYDLITTA---VFSQP------EIGTVGLSEEDALHRYKRV 388 (484)
T ss_dssp GTSCC----------CHHHHHHHHHHHHHHHHC---CCCCCTTCCEE---ECCSS------CEEEEECCHHHHHHHCSEE
T ss_pred CCCCc----------CHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEE---EECCC------CEEEeeCCHHHHHHcCCCE
Confidence 97432 5567999999999999975432 45556653 34322 15566655321 1
Q ss_pred -EEEcc-----------CCCcEEEEEEE--CCEEEEEEeecCChHHhhHH-HHHHhCCCCCC-h-hhhcCCCcHHHHHHH
Q 010917 424 -IEIGN-----------FDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEALEI 486 (497)
Q Consensus 424 -~~~~~-----------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 486 (497)
+.... ....+.++.++ +++|+|+++++..+.++... ..+++.+.+++ . ..++.|||++|++++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 468 (484)
T 3o0h_A 389 EIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVT 468 (484)
T ss_dssp EEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGC
T ss_pred EEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHH
Confidence 11111 12357777765 48999999988877776644 45678888876 3 446999999999998
Q ss_pred HHc
Q 010917 487 ARA 489 (497)
Q Consensus 487 ~~~ 489 (497)
++.
T Consensus 469 ~~~ 471 (484)
T 3o0h_A 469 MYK 471 (484)
T ss_dssp CCS
T ss_pred Hhh
Confidence 774
No 50
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=1.7e-39 Score=343.25 Aligned_cols=395 Identities=16% Similarity=0.213 Sum_probs=265.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccc-c-------------------------C
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGY-L-------------------------F 111 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~-l-------------------------~ 111 (497)
...+||+||||||||++||..|++.|+ +|+|||+....+........+. + +
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~---~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~ 181 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGA---KTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF 181 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccEEEECCCccHHHHHHHHHhCCC---eEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC
Confidence 446899999999999999999999998 8999997422111100000000 0 0
Q ss_pred CCCCCCCC-C-CCCccccCCCCCCC-----------CHhHHHHcCcEEEeCCcEEEEecCCCEEEECCC--cEEEeccEE
Q 010917 112 PLDKKPAR-L-PGFHTCVGSGGERQ-----------TPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLI 176 (497)
Q Consensus 112 ~~~~~~~~-~-~~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~i~~d~lv 176 (497)
+. ..+.. . ..+... ..+ ....+...+++++.+ .+..++.....+...+| .++.||+||
T Consensus 182 g~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lv 254 (598)
T 2x8g_A 182 GW-SLDRSKISHNWSTM-----VEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKII 254 (598)
T ss_dssp TC-CCCGGGCCCCHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEE
T ss_pred Cc-cccCCcCccCHHHH-----HHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEE
Confidence 00 00000 0 000000 000 011245568998864 56666655444555566 468999999
Q ss_pred eccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhcc
Q 010917 177 VATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLF 256 (497)
Q Consensus 177 lAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~ 256 (497)
||||+.|+. |.++|.... .. +.+.+......+++++|||+|++|+|+|..|+++|.+||++++. .+++. +
T Consensus 255 iAtGs~p~~-p~i~G~~~~-~~------~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~ 324 (598)
T 2x8g_A 255 LATGERPKY-PEIPGAVEY-GI------TSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG-F 324 (598)
T ss_dssp ECCCEEECC-CSSTTHHHH-CE------EHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-S
T ss_pred EeCCCCCCC-CCCCCcccc-eE------cHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc-C
Confidence 999998874 444442111 11 12333333345789999999999999999999999999999988 56553 7
Q ss_pred CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeC-----CC---CcE-EEEEeCCCcEEE--cCEEEEeccCcCCCcc--hhh
Q 010917 257 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAG-----SD---GRV-AAVKLEDGSTID--ADTIVIGIGAKPTVSP--FER 323 (497)
Q Consensus 257 ~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~-----~~---~~v-~~v~~~~g~~i~--~D~vv~a~G~~p~~~~--~~~ 323 (497)
++++.+.+.+.+++.||++++++.+.+++.. ++ +.+ ..+.+.+|++++ +|.||+|+|++||+++ ++.
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~ 404 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCET 404 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGG
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchh
Confidence 8999999999999999999999988888532 11 333 223456777655 9999999999999987 577
Q ss_pred cCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC--CCCCCCCceeee
Q 010917 324 VGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSR 400 (497)
Q Consensus 324 ~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~--~~~~~~p~~~~~ 400 (497)
++++.+ +|+|.||++++|+.|+|||+|||+... ...+..|..||+.+|.+|+++.. ..|..+|+.+
T Consensus 405 ~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~-- 473 (598)
T 2x8g_A 405 VGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGK---------PQLTPVAIQAGRYLARRLFAGATELTDYSNVATTV-- 473 (598)
T ss_dssp GCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTS---------CCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEE--
T ss_pred cCceECCCCcEEeCCCCcCCCCCEEEEeeecCCC---------CccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEE--
Confidence 888875 577999999999999999999996532 11566799999999999997543 3456667543
Q ss_pred ccccCCCCcceeeEEeecCCC---------cEEE-E-----------c-cCCCcEEEEEEE---CCEEEEEEeecCChHH
Q 010917 401 VFEYEGSPRKVWWQFFGDNVG---------ETIE-I-----------G-NFDPKIATFWID---SGKLKGVLVESGSPEE 455 (497)
Q Consensus 401 ~~~~~g~~~~~~~~~~g~~~~---------~~~~-~-----------~-~~~~~~~~~~~~---~~~~~g~~~~~~~~~~ 455 (497)
|... .+..+|.... .+.. . + +....+.++.++ +++|+|+++++..+.+
T Consensus 474 -~~~~------~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~ 546 (598)
T 2x8g_A 474 -FTPL------EYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGE 546 (598)
T ss_dssp -CSSS------CEEEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHH
T ss_pred -ECCC------ceEEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHH
Confidence 2211 1334553321 0111 0 0 112347777765 6999999987776766
Q ss_pred hhH-HHHHHhCCCCCC--hhhhcCCCcHHHHHHHHHcc
Q 010917 456 FQL-LPTLARSQPFVD--KAKLQQASSVEEALEIARAA 490 (497)
Q Consensus 456 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 490 (497)
+.. +..+++.+.+++ ...++.|||++|++..++..
T Consensus 547 ~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 584 (598)
T 2x8g_A 547 ITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLHVT 584 (598)
T ss_dssp HHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCCB
T ss_pred HHHHHHHHHHcCCCHHHHhhccccCCCHHHHHHHHHHh
Confidence 554 455678888876 34469999999999988763
No 51
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=2.7e-40 Score=340.08 Aligned_cols=298 Identities=21% Similarity=0.279 Sum_probs=225.8
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
.+.+++|||||||+||+++|..|++.++ +|||||+++++.|. |.|+. ...+ ...+..+ ...+.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~---~VtLId~~~~~~~~-PlL~~-va~G-~l~~~~i-----------~~p~~ 101 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKY---NVSIISPRSYFLFT-PLLPS-APVG-TVDEKSI-----------IEPIV 101 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTC---EEEEEESSSEEECG-GGGGG-TTTT-SSCGGGG-----------EEEHH
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCC---cEEEECCCCCcccc-cchhH-Hhhc-cccHHHh-----------hhhHH
Confidence 4556899999999999999999988776 89999999987664 54432 1111 0001100 01112
Q ss_pred hHH--HHcCcEEEeCCcEEEEecCCCEEEEC--------------------CCcEEEeccEEeccCCCCCcCCCCCCCCC
Q 010917 137 EWY--KEKGIEMIYQDPVTSIDIEKQTLITN--------------------SGKLLKYGSLIVATGCTASRFPEKIGGYL 194 (497)
Q Consensus 137 ~~~--~~~~v~~~~~~~v~~i~~~~~~v~~~--------------------~g~~i~~d~lvlAtG~~~~~~~~~~g~~~ 194 (497)
... .+.+++++. .+|+.||++.++|++. ++.++.||+||||||+.+.. +.+||..
T Consensus 102 ~~~~~~~~~v~~~~-~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~-~~ipG~~- 178 (502)
T 4g6h_A 102 NFALKKKGNVTYYE-AEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT-FGIPGVT- 178 (502)
T ss_dssp HHHTTCSSCEEEEE-EEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC-TTCTTHH-
T ss_pred HHHHhhcCCeEEEE-EEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc-CCccCcc-
Confidence 222 234788887 4899999999988763 35689999999999999874 4445532
Q ss_pred CcEEEecCHHHHHHHHHhhc-----------------cCCeEEEEcCCHHHHHHHHHHHhCC--------------CcEE
Q 010917 195 PGVHYIRDVADADALISSLE-----------------KAKKVVVVGGGYIGMEVAAAAVGWK--------------LDTT 243 (497)
Q Consensus 195 ~gv~~~~~~~~~~~~~~~~~-----------------~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~Vt 243 (497)
+..+.++++.++..+++.+. ...+++|||+|++|+|+|..|++++ .+|+
T Consensus 179 e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~ 258 (502)
T 4g6h_A 179 DYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIH 258 (502)
T ss_dssp HHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEE
T ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeE
Confidence 23467788888776654321 1247999999999999999987643 5799
Q ss_pred EEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc----EEEcCEEEEeccCcCCC-
Q 010917 244 IIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTV- 318 (497)
Q Consensus 244 lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~----~i~~D~vv~a~G~~p~~- 318 (497)
++++.+++++. +++++++.+++.|+++||+++++++|++++. ++.+......||+ ++++|.||||+|.+|+.
T Consensus 259 lve~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 259 LVEALPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPV 335 (502)
T ss_dssp EECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHH
T ss_pred EeccccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCCcCCHH
Confidence 99999999985 8999999999999999999999999999973 4444455666763 69999999999999983
Q ss_pred --cchhhcCCccc-CCCEEecCCCCC-CCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 319 --SPFERVGLNSS-VGGIQVDGQFRT-RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 319 --~~~~~~gl~~~-~g~i~vd~~~~t-~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
++...+++..+ +|+|.||++||| ++|||||+|||+..+.++ ..+.|.+||+.+|+||.+
T Consensus 336 ~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~--------~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 336 ITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPP--------TAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp HHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCC--------CHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCC--------chHHHHHHHHHHHHHHHH
Confidence 23445555543 578999999999 899999999999876543 566799999999999954
No 52
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=6.4e-40 Score=332.97 Aligned_cols=330 Identities=18% Similarity=0.167 Sum_probs=236.6
Q ss_pred EeecccccccCccccc--CCCCccccc---CCCCchhhhccccccc---------ccccCCCCCcEEEEcCchHHHHHHH
Q 010917 12 SVSNSLSFKHGLSLWC--PQSPSLHRI---RHSSAKNFQRRGFVVA---------YSSFANENREFVIVGGGNAAGYAAR 77 (497)
Q Consensus 12 ~~~~~~~~~~g~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~~VvIIGgG~AGl~aA~ 77 (497)
..+||||..||+.|+. +|..+|.+. ..++++..++++..+. ..+.....++|+||||||||++||.
T Consensus 60 ~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~ 139 (456)
T 2vdc_G 60 QATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAE 139 (456)
T ss_dssp HHHCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHH
T ss_pred HhhCCCCccccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHH
Confidence 3579999999999999 999999885 4788888877765321 1112345789999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCcEEEeCCcEEEEec
Q 010917 78 TFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDI 157 (497)
Q Consensus 78 ~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~ 157 (497)
.|++.|+ +|+|||+++..... +. +..+....+..+ ..+..+++++.|+++++++.+.
T Consensus 140 ~L~~~G~---~V~v~e~~~~~GG~---l~--~gip~~~~~~~~-----------~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 140 ELRAKGY---EVHVYDRYDRMGGL---LV--YGIPGFKLEKSV-----------VERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp HHHHHTC---CEEEECSSSSCSTH---HH--HTSCTTTSCHHH-----------HHHHHHHHHHTTCEEETTCCBT----
T ss_pred HHHHCCC---eEEEEeccCCCCCe---ee--ecCCCccCCHHH-----------HHHHHHHHHHCCcEEEeCCEec----
Confidence 9999998 89999998654210 00 101111111000 1234567788899999987652
Q ss_pred CCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHH--H----------hhccCCeEEEEcCC
Q 010917 158 EKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALI--S----------SLEKAKKVVVVGGG 225 (497)
Q Consensus 158 ~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~--~----------~~~~~~~vvVvG~G 225 (497)
+.+.++++. +.||+||||||+.+...+.++|.+.+++++..++....... . ....+++|+|||+|
T Consensus 197 --~~v~~~~~~-~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG 273 (456)
T 2vdc_G 197 --RDASLPELR-RKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 273 (456)
T ss_dssp --TTBCHHHHH-SSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSS
T ss_pred --cEEEhhHhH-hhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCC
Confidence 223333332 57999999999974334567787778887654333322211 1 11357899999999
Q ss_pred HHHHHHHHHHHhCCCc-EEEEecCCcc-hhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe------
Q 010917 226 YIGMEVAAAAVGWKLD-TTIIFPENHL-LQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL------ 297 (497)
Q Consensus 226 ~~g~e~A~~l~~~g~~-Vtlv~~~~~~-~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~------ 297 (497)
++|+|+|..+.+.|.+ |+++++.+.. ++. .+.+ .+.+++.||++++++.++++.. ++++..+.+
T Consensus 274 ~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~-~~~e-----~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~ 345 (456)
T 2vdc_G 274 DTAMDCVRTAIRQGATSVKCLYRRDRKNMPG-SQRE-----VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLG 345 (456)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSSCSTTCSS-CHHH-----HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEEeCCccCCCC-CHHH-----HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEec
Confidence 9999999999999984 9999998865 442 2222 2457888999999999998874 343322221
Q ss_pred ---C---------CC--cEEEcCEEEEeccCcCCCc--chhhcCCccc-CCCEEecCC-CCCCCCcEEEeccccccCCcc
Q 010917 298 ---E---------DG--STIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKM 359 (497)
Q Consensus 298 ---~---------~g--~~i~~D~vv~a~G~~p~~~--~~~~~gl~~~-~g~i~vd~~-~~t~~~~iya~GD~~~~~~~~ 359 (497)
. +| +++++|.||+|+|+.|+.. ++++++++.+ +|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 346 ~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~-- 423 (456)
T 2vdc_G 346 VADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGAS-- 423 (456)
T ss_dssp EEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCC--
T ss_pred ccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCch--
Confidence 1 23 4799999999999999876 6888888875 688999997 9999999999999997643
Q ss_pred CCcccccccHHHHHHHHHHHHHHHhc
Q 010917 360 YDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 360 ~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|+.+|+.+|.+|..
T Consensus 424 --------~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 424 --------LVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp --------SHHHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHHH
Confidence 456788999999988864
No 53
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.3e-38 Score=304.80 Aligned_cols=293 Identities=22% Similarity=0.313 Sum_probs=211.0
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
+...+||+||||||||++||.+|+++|+ +|+|||++... +.++.. .....+|++....+.++.....
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~g~---~V~liE~~~~g--------G~~~~~--~~i~~~p~~~~~~~~~~~~~~~ 69 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRANL---KTVMIERGIPG--------GQMANT--EEVENFPGFEMITGPDLSTKMF 69 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTT--------GGGGGC--SCBCCSTTCSSBCHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCC--------Ceeecc--cccCCcCCccccchHHHHHHHH
Confidence 4456999999999999999999999998 89999986321 001100 0011122222111111112234
Q ss_pred hHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC---CcEEEecCHHHHHHHHHhh
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 213 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~~~~~ 213 (497)
.++.+.+..+..+..+...+.........+++++.||+||||||++|+. |.+||.+. .++.+.. ......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~-~~ipG~~~~~~~~v~~~~------~~~~~~ 142 (312)
T 4gcm_A 70 EHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKK-IGVPGEQELGGRGVSYCA------VCDGAF 142 (312)
T ss_dssp HHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESCH------HHHGGG
T ss_pred HHHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCc-CCCCChhhhCCccEEeee------ccCccc
Confidence 4556778888887777777777778888888899999999999999874 55666543 2333321 122234
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCc--
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR-- 291 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~-- 291 (497)
..+|+++|||+|++|+|+|..|+++|.+||++++.+++++.. ....+.+++.++.......+..+...+...
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQR------ILQDRAFKNDKIDFIWSHTLKSINEKDGKVGS 216 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCH------HHHHHHHHCTTEEEECSEEEEEEEEETTEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcch------hHHHHHHHhcCcceeeecceeeeecccccccc
Confidence 568999999999999999999999999999999999887631 122355678889998888777665432211
Q ss_pred EEEEEeC--CCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccH
Q 010917 292 VAAVKLE--DGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 369 (497)
Q Consensus 292 v~~v~~~--~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~ 369 (497)
....... ++..+++|.|++++|.+|+..+++.+++..++|+|.||+++|||+|+|||+|||+..+.. .+
T Consensus 217 ~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~~---------~~ 287 (312)
T 4gcm_A 217 VTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLR---------QI 287 (312)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECSTTBSCSCC---------SH
T ss_pred ceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEeecCCCcch---------HH
Confidence 1111222 335799999999999999999999999988888999999999999999999999974321 45
Q ss_pred HHHHHHHHHHHHHHh
Q 010917 370 DHARQSAQHCIKALL 384 (497)
Q Consensus 370 ~~A~~~g~~~a~~i~ 384 (497)
..|..+|+.||.+|.
T Consensus 288 ~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 288 VTATGDGSIAAQSAA 302 (312)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 568889999998885
No 54
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4.9e-38 Score=308.68 Aligned_cols=313 Identities=18% Similarity=0.217 Sum_probs=225.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 137 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (497)
+.++||+|||||+||+++|..|+++|+ +|+|||+++....... ...+ .......+++.......+...+.+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 73 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGL---SFRFVDPLPEPGGQLT-----ALYP-EKYIYDVAGFPKVYAKDLVKGLVE 73 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSCHHHH-----HTCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCeee-----ccCC-CceeeccCCCCCCCHHHHHHHHHH
Confidence 345799999999999999999999987 8999999865421100 0000 000011111111100111122334
Q ss_pred HHHHcCcEEEeCCcEEEEecCC--CEEEECCCcEEEeccEEeccCCC---CCcCCCCCCCCC---CcEEE-ecCHHHHHH
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCT---ASRFPEKIGGYL---PGVHY-IRDVADADA 208 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~~i~~d~lvlAtG~~---~~~~~~~~g~~~---~gv~~-~~~~~~~~~ 208 (497)
.+++.+++++++++|+.++.+. ..+.++++..+.||+||+|||+. |. .+.++|... .++++ +.+..
T Consensus 74 ~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~-~~~i~g~~~~~~~~~~~~~~~~~---- 148 (335)
T 2zbw_A 74 QVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPR-RIGAPGEREFEGRGVYYAVKSKA---- 148 (335)
T ss_dssp HHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEEC-CCCCTTTTTTBTTTEESSCSCGG----
T ss_pred HHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCC-CCCCCChhhccCcEEEEecCchh----
Confidence 4566789999999999998765 35777788789999999999994 44 233444321 12332 11111
Q ss_pred HHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCC
Q 010917 209 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 288 (497)
Q Consensus 209 ~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~ 288 (497)
...+++|+|||+|.+|+|+|..|.+.|.+|+++++.+.+++ .+...+.+.+.+++.||++++++.|.+++.
T Consensus 149 ----~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~-- 219 (335)
T 2zbw_A 149 ----EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELRRVEG-- 219 (335)
T ss_dssp ----GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEEEEEE--
T ss_pred ----hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCcceeEcc--
Confidence 12579999999999999999999999999999999987764 356778888889999999999999999986
Q ss_pred CCcEEEEEeC---CC--cEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcc
Q 010917 289 DGRVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 363 (497)
Q Consensus 289 ~~~v~~v~~~---~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~ 363 (497)
++.+..+.+. +| +++++|.||+|+|++|+.+++++++++.++|++.||++++|+.|+|||+|||+..+..
T Consensus 220 ~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~----- 294 (335)
T 2zbw_A 220 DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTYPGK----- 294 (335)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEECTTC-----
T ss_pred CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEeccccccCcc-----
Confidence 3455456665 67 5799999999999999999999999987778999999999999999999999986532
Q ss_pred cccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeec
Q 010917 364 ARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRV 401 (497)
Q Consensus 364 ~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~p~~~~~~ 401 (497)
...+..|..+|+.+|.+|.+.. ......|+.|+..
T Consensus 295 --~~~~~~A~~~g~~aa~~i~~~l-~~~~~~~~~~~~~ 329 (335)
T 2zbw_A 295 --LPLIVLGFGEAAIAANHAAAYA-NPALKVNPGHSSE 329 (335)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHH-CTTSCSSCCCGGG
T ss_pred --hhhhhhhHHHHHHHHHHHHHHh-hhhhccCCccccc
Confidence 2266778999999999997532 2233344444443
No 55
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=3.9e-38 Score=312.57 Aligned_cols=316 Identities=21% Similarity=0.305 Sum_probs=221.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 137 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (497)
+.++||+|||||+||+++|..|++.|+ +|+|||+.+....... ...+ .......+++.......+...+.+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 82 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNI---SCRIIESMPQLGGQLA-----ALYP-EKHIYDVAGFPEVPAIDLVESLWA 82 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHH-----HTCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccc-----ccCC-CcccccCCCCCCCCHHHHHHHHHH
Confidence 345799999999999999999999987 8999999865421000 0000 000011111111100111122334
Q ss_pred HHHHcCcEEEeCCcEEEEecCCC---EEEECCCcEEEeccEEeccCCC---CCcCCCCCC-C-CCC--cEEEe-cCHHHH
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCT---ASRFPEKIG-G-YLP--GVHYI-RDVADA 206 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lvlAtG~~---~~~~~~~~g-~-~~~--gv~~~-~~~~~~ 206 (497)
.+++.+++++++++|+.++.... .+.+.+++.+.||+||+|||+. |. .+.++| . ... ++++. ++..
T Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~-~~~i~g~~~~~~~~~v~~~~~~~~-- 159 (360)
T 3ab1_A 83 QAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPR-KLPQLGNIDHLTGSSVYYAVKSVE-- 159 (360)
T ss_dssp HHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBC-CCGGGCCCTTTBTTTEESSCSCGG--
T ss_pred HHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCC-CCCCCCchhhCcCceEEEecCCHH--
Confidence 45667899999999999987643 6888888889999999999994 43 233445 2 222 24322 1111
Q ss_pred HHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEe
Q 010917 207 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 286 (497)
Q Consensus 207 ~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~ 286 (497)
...+++|+|||+|.+|+|+|..|.+.+.+|+++++.+.+.+. +...+.+.+.+++.||+++++++|.+++.
T Consensus 160 ------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~---~~~~~~l~~~~~~~gv~i~~~~~v~~i~~ 230 (360)
T 3ab1_A 160 ------DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH---GKTAHEVERARANGTIDVYLETEVASIEE 230 (360)
T ss_dssp ------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC---SHHHHSSHHHHHHTSEEEESSEEEEEEEE
T ss_pred ------HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC---HHHHHHHHHHhhcCceEEEcCcCHHHhcc
Confidence 125799999999999999999999999999999999877652 35667778888999999999999999986
Q ss_pred CCCCcEEEEEeC--CC--cEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCc
Q 010917 287 GSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 362 (497)
Q Consensus 287 ~~~~~v~~v~~~--~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~ 362 (497)
. ++++..+.+. +| +++++|.||+|+|++|+.++++.+++..++|++.||++++|+.|+|||+|||+..+..
T Consensus 231 ~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~---- 305 (360)
T 3ab1_A 231 S-NGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK---- 305 (360)
T ss_dssp E-TTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC----
T ss_pred C-CCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc----
Confidence 4 4555556664 77 5799999999999999999999999887778999999999999999999999986532
Q ss_pred ccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCceeeecc
Q 010917 363 TARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVF 402 (497)
Q Consensus 363 ~~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~p~~~~~~~ 402 (497)
...+..|..||..+|.+|.+.........+++|+..+
T Consensus 306 ---~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~~~~~~~ 342 (360)
T 3ab1_A 306 ---LKIIQTGLSEATMAVRHSLSYIKPGEKIRNVFSSVKM 342 (360)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHSCC------------
T ss_pred ---cceeehhHHHHHHHHHHHHhhcCCccccCceeccchh
Confidence 2266779999999999997532222222445555444
No 56
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=2.9e-38 Score=350.54 Aligned_cols=348 Identities=17% Similarity=0.169 Sum_probs=244.5
Q ss_pred EeecccccccCccccc--CCCCcccccC---CCCchhhhcccccccc---------cc--------cCCCCCcEEEEcCc
Q 010917 12 SVSNSLSFKHGLSLWC--PQSPSLHRIR---HSSAKNFQRRGFVVAY---------SS--------FANENREFVIVGGG 69 (497)
Q Consensus 12 ~~~~~~~~~~g~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~--------~~~~~~~VvIIGgG 69 (497)
..+||||..||++|+. +|..+|.+.. .++++..++++..+.. .+ +....+||+|||||
T Consensus 117 ~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgG 196 (1025)
T 1gte_A 117 FSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAG 196 (1025)
T ss_dssp HHHCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCS
T ss_pred HhcCChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECcc
Confidence 3579999999999887 8999999843 7899988887765420 11 11236799999999
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHHHcCcEEEeC
Q 010917 70 NAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQ 149 (497)
Q Consensus 70 ~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 149 (497)
|||++||..|+++|+. +|+|||+++..... +. +..+....+.. ...+..+++++.||+++++
T Consensus 197 pAGl~aA~~L~~~G~~--~Vtv~E~~~~~GG~---~~--~~ip~~~~~~~-----------~~~~~~~~~~~~gv~~~~~ 258 (1025)
T 1gte_A 197 PASISCASFLARLGYS--DITIFEKQEYVGGL---ST--SEIPQFRLPYD-----------VVNFEIELMKDLGVKIICG 258 (1025)
T ss_dssp HHHHHHHHHHHHTTCC--CEEEEESSSSCSTH---HH--HTSCTTTSCHH-----------HHHHHHHHHHTTTCEEEES
T ss_pred HHHHHHHHHHHhcCCC--cEEEEeCCCCCCcc---cc--ccCCcccCCHH-----------HHHHHHHHHHHCCcEEEcc
Confidence 9999999999999982 69999998653211 00 00110000000 0122346678889999998
Q ss_pred CcEEEEecCCCEEEECCCcEEEeccEEeccCCC-CCcCCCCCCCC-CCcEEEecCHHHHHHHHHh----------hccCC
Q 010917 150 DPVTSIDIEKQTLITNSGKLLKYGSLIVATGCT-ASRFPEKIGGY-LPGVHYIRDVADADALISS----------LEKAK 217 (497)
Q Consensus 150 ~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~-~~~~~~~~g~~-~~gv~~~~~~~~~~~~~~~----------~~~~~ 217 (497)
+.+. .+.++++++..+.||+||||||+. |+.++.++|.. .+++++..++......... ...++
T Consensus 259 ~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~ 333 (1025)
T 1gte_A 259 KSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRG 333 (1025)
T ss_dssp CCBS-----TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCS
T ss_pred cEec-----cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCC
Confidence 7652 133445555557899999999994 76554434432 4577664333221111100 12367
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCc-chhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEE
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH-LLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 295 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~-~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v 295 (497)
+|+|||||++|+|+|..+.++|. +||++++.+. +++ .+++++ +.+++.||++++++.++++... ++++..+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~-~~~~e~-----~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v 406 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIR-AVPEEV-----ELAKEEKCEFLPFLSPRKVIVK-GGRIVAV 406 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCC-SCHHHH-----HHHHHTTCEEECSEEEEEEEEE-TTEEEEE
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCC-CCHHHH-----HHHHHcCCEEEeCCCceEEEcc-CCeEEEE
Confidence 99999999999999999999996 8999999884 333 234333 4578899999999999999753 5666555
Q ss_pred EeC------CC---------cEEEcCEEEEeccCcCC-Ccchhh-cCCccc-CCCEEecC-CCCCCCCcEEEeccccccC
Q 010917 296 KLE------DG---------STIDADTIVIGIGAKPT-VSPFER-VGLNSS-VGGIQVDG-QFRTRMPGIFAIGDVAAFP 356 (497)
Q Consensus 296 ~~~------~g---------~~i~~D~vv~a~G~~p~-~~~~~~-~gl~~~-~g~i~vd~-~~~t~~~~iya~GD~~~~~ 356 (497)
++. +| +++++|.||+|+|++|+ ..++.+ .|++.+ +|+|.||+ +++|+.|+|||+|||+..+
T Consensus 407 ~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~ 486 (1025)
T 1gte_A 407 QFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMA 486 (1025)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSC
T ss_pred EEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCc
Confidence 542 22 36999999999999864 556666 478776 57799997 8999999999999999854
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHHhc------CC-CCCCCCCCceee
Q 010917 357 LKMYDRTARVEHVDHARQSAQHCIKALLS------AQ-THTYDYLPYFYS 399 (497)
Q Consensus 357 ~~~~g~~~~~~~~~~A~~~g~~~a~~i~~------~~-~~~~~~~p~~~~ 399 (497)
. .+..|..+|+.||.+|.+ +. ...++..||+|+
T Consensus 487 ~----------~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ 526 (1025)
T 1gte_A 487 N----------TTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYT 526 (1025)
T ss_dssp C----------CHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCC
T ss_pred h----------HHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccc
Confidence 3 345588889999988863 22 224678999999
No 57
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.6e-37 Score=304.43 Aligned_cols=292 Identities=17% Similarity=0.234 Sum_probs=215.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
++||+|||||+||++||..|++.|+ +|+|||+++....... ...+ ......++++..........++.+.+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gG~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQA---SVKIIESLPQLGGQLS-----ALYP-EKYIYDVAGFPKIRAQELINNLKEQM 77 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHH-----HHCT-TSEECCSTTCSSEEHHHHHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCCCceeh-----hcCC-CceEeccCCCCCCCHHHHHHHHHHHH
Confidence 4799999999999999999999987 8999999875431000 0000 00001122211111111122334555
Q ss_pred HHcCcEEEeCCcEEEEecCCC---EEEECCCcEEEeccEEeccCC---CCCcCCCCCCCCC---CcEEEecCHHHHHHHH
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGC---TASRFPEKIGGYL---PGVHYIRDVADADALI 210 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lvlAtG~---~~~~~~~~~g~~~---~gv~~~~~~~~~~~~~ 210 (497)
++.+++++++++|+.++...+ .+.+++++ +.||+||+|||+ .|. .+.++|... ..+++ .+.+..
T Consensus 78 ~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~-~~~~~g~~~~~g~~~~~--~~~~~~--- 150 (332)
T 3lzw_A 78 AKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR-KLELENAEQYEGKNLHY--FVDDLQ--- 150 (332)
T ss_dssp TTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC-CCCCTTGGGGBTTTEES--SCSCGG---
T ss_pred HHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC-CCCCCChhhccCceEEE--ecCCHH---
Confidence 667999999999999998766 78888876 999999999999 665 344455432 23332 112211
Q ss_pred HhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCC
Q 010917 211 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG 290 (497)
Q Consensus 211 ~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~ 290 (497)
...+++++|||+|.+|+|+|..|++.+.+|+++++.+.+.+. ++ ..+.+++.||++++++.+.+++.+++
T Consensus 151 --~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~--~~-----~~~~l~~~gv~~~~~~~v~~i~~~~~- 220 (332)
T 3lzw_A 151 --KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH--EH-----SVENLHASKVNVLTPFVPAELIGEDK- 220 (332)
T ss_dssp --GGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC--HH-----HHHHHHHSSCEEETTEEEEEEECSSS-
T ss_pred --HcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc--HH-----HHHHHhcCCeEEEeCceeeEEecCCc-
Confidence 125899999999999999999999999999999999877542 22 23447899999999999999985432
Q ss_pred cEEEEEeCC-----CcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccc
Q 010917 291 RVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTAR 365 (497)
Q Consensus 291 ~v~~v~~~~-----g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~ 365 (497)
+..+.+.+ ++++++|.||+|+|++|+.++++.+++..++|++.||++++|+.|+|||+|||+..+..
T Consensus 221 -~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~------- 292 (332)
T 3lzw_A 221 -IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGK------- 292 (332)
T ss_dssp -CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEECTTC-------
T ss_pred -eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceecCCCC-------
Confidence 33555554 45799999999999999999999999988888999999999999999999999975432
Q ss_pred cccHHHHHHHHHHHHHHHhc
Q 010917 366 VEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 366 ~~~~~~A~~~g~~~a~~i~~ 385 (497)
...+..|..+|+.+|.+|+.
T Consensus 293 ~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 293 VNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred cceEeeehhhHHHHHHHHHH
Confidence 22667799999999999875
No 58
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=9.8e-37 Score=297.52 Aligned_cols=289 Identities=21% Similarity=0.247 Sum_probs=213.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
++||+|||||+||++||..|+++|+ +|+|||++ .... +.. ......++++..........++.+++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~-~gg~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYML---KTLVIGET-PGGQ--------LTE--AGIVDDYLGLIEIQASDMIKVFNKHI 80 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESS-TTGG--------GGG--CCEECCSTTSTTEEHHHHHHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCC---cEEEEecc-CCCe--------ecc--cccccccCCCCCCCHHHHHHHHHHHH
Confidence 5799999999999999999999998 79999997 1100 000 00011111111111111122334556
Q ss_pred HHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC---CcEEEecCHHHHHHHHHhhc
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSLE 214 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~~~~~~ 214 (497)
++.+++++. ++|+.++.+.. .+.++++..+.||+||+|||+.|. .+.+++... +++++.. .......
T Consensus 81 ~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~-~~~i~g~~~~~~~~~~~~~------~~~~~~~ 152 (323)
T 3f8d_A 81 EKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR-KLGVPGEQEFAGRGISYCS------VADAPLF 152 (323)
T ss_dssp HTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC-CCCCTTTTTTBTTTEESCH------HHHGGGG
T ss_pred HHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc-cCCCCchhhhcCCceEEec------cCCHhHc
Confidence 678999998 89999987643 677888888999999999999976 455566443 4554321 1122345
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 294 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~ 294 (497)
.+++++|+|+|.+|+|+|..|.+.|.+|+++++.+.+++ ++. .+.+.+++.||++++++++++++.+ +.+..
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~ 224 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPI---YVETVKKKPNVEFVLNSVVKEIKGD--KVVKQ 224 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEES--SSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHH---HHHHHHhCCCcEEEeCCEEEEEecc--CceeE
Confidence 689999999999999999999999999999999988765 332 2333344559999999999999854 45556
Q ss_pred EEeCC---Cc--EEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCccccccc
Q 010917 295 VKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEH 368 (497)
Q Consensus 295 v~~~~---g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~ 368 (497)
+.+.+ |+ ++++|.||+++|++|+.++++.++++.+ +|++.||++++|+.|+|||+|||+..+.. ...
T Consensus 225 v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~-------~~~ 297 (323)
T 3f8d_A 225 VVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLG-------FRQ 297 (323)
T ss_dssp EEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTTT-------CCC
T ss_pred EEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCCc-------ccc
Confidence 66665 76 7999999999999999999999998865 68899999999999999999999986410 226
Q ss_pred HHHHHHHHHHHHHHHhc
Q 010917 369 VDHARQSAQHCIKALLS 385 (497)
Q Consensus 369 ~~~A~~~g~~~a~~i~~ 385 (497)
+..|..+|+.+|.+|..
T Consensus 298 ~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 298 VITAVAQGAVAATSAYR 314 (323)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eeehhhHHHHHHHHHHH
Confidence 67788999999988853
No 59
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=7.1e-37 Score=297.59 Aligned_cols=298 Identities=20% Similarity=0.225 Sum_probs=203.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccc-cCCCCCCCCHh
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTPE 137 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 137 (497)
+.+||+||||||||++||..|+++|+ +|+|||++...... + .+.+.. .....++++++.. .+.++..+..+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~---~v~liE~~~~gg~~---~-~G~~~~-~~~i~~~~g~~~~i~~~~l~~~~~~ 74 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSL---KPVMYEGFMAGGVA---A-GGQLTT-TTIIENFPGFPNGIDGNELMMNMRT 74 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSGGGCC---T-TCGGGG-SSEECCSTTCTTCEEHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCcc---c-CCCcCC-hHHhhhccCCcccCCHHHHHHHHHH
Confidence 45899999999999999999999998 89999987532110 0 011111 1111222332211 11111223345
Q ss_pred HHHHcCcEEEeCCcEEEEecCC--CEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhcc
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 215 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 215 (497)
.+++.++++... .+....... ..+.+.++.++.||+||||||+.|+. |.+||.+.............+. ......
T Consensus 75 ~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~-~~ipG~~~~~~~~~~~~~~~~~-~~~~~~ 151 (314)
T 4a5l_A 75 QSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKR-MHVPGEDKYWQNGVSACAICDG-AVPIFR 151 (314)
T ss_dssp HHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECC-CCCTTHHHHBTTTEESCHHHHT-TSGGGT
T ss_pred HHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccc-cCCCccccccccceeeehhhhh-hhhhcC
Confidence 566778888764 566655443 46777888899999999999999874 5556643221111111122222 122346
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 295 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v 295 (497)
+++++|||+|++|+|+|..|+++|.+||++++.+.+.. .+. ...+.+...+++.+....+.++... +.....+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~ 224 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKT---MQERVLNHPKIEVIWNSELVELEGD-GDLLNGA 224 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEES-SSSEEEE
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cch---hhhhhhcccceeeEeeeeeEEEEee-eecccee
Confidence 89999999999999999999999999999998876543 222 2334556778999999988888754 3333333
Q ss_pred Ee-----CCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHH
Q 010917 296 KL-----EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVD 370 (497)
Q Consensus 296 ~~-----~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~ 370 (497)
.+ .+++++++|.|++++|++||++++... +..+++++.||+++|||.|+|||+|||+..+.. .+.
T Consensus 225 ~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~-~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~~~~~---------~~~ 294 (314)
T 4a5l_A 225 KIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQ-VKTADDGYILTEGPKTSVDGVFACGDVCDRVYR---------QAI 294 (314)
T ss_dssp EEEETTTCCEEEEECSEEEECSCEEESCGGGTTS-SCBCTTSCBCCBTTBCSSTTEEECSTTTCSSCC---------CHH
T ss_pred EEeecccccceeeccccceEecccccChhHhccc-ceEcCCeeEeCCCCccCCCCEEEEEeccCCcch---------HHH
Confidence 32 345689999999999999999998654 445555666999999999999999999986532 334
Q ss_pred HHHHHHHHHHHHHh
Q 010917 371 HARQSAQHCIKALL 384 (497)
Q Consensus 371 ~A~~~g~~~a~~i~ 384 (497)
.|..+|+.||.++.
T Consensus 295 ~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 295 VAAGSGCMAALSCE 308 (314)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 57778888887764
No 60
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.8e-36 Score=294.11 Aligned_cols=288 Identities=24% Similarity=0.275 Sum_probs=210.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..+||+|||||+||++||..|++.|+ +|+|||+..... . +.... ....++++....+......+.++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg--~------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGF---SVAILDKAVAGG--L------TAEAP--LVENYLGFKSIVGSELAKLFADH 81 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSTTG--G------GGGCS--CBCCBTTBSSBCHHHHHHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCCCc--c------ccccc--hhhhcCCCcccCHHHHHHHHHHH
Confidence 45799999999999999999999997 899999953210 0 00000 00011111000000011223445
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC---CcEEEecCHHHHHHHHHhh
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 213 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~~~~~ 213 (497)
+++.+++++. .+|..++...+ .+.+ ++..+.||+||+|||+.+. .+.+++.+. .++++... .....
T Consensus 82 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~-~~~i~g~~~~~~~~~~~~~~------~~~~~ 152 (319)
T 3cty_A 82 AANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK-HLGVKGESEYFGKGTSYCST------CDGYL 152 (319)
T ss_dssp HHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESCHH------HHGGG
T ss_pred HHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc-cCCCCChHHhCCceEEEEEe------cchhh
Confidence 5667999988 68999987665 4555 5567999999999999876 344555321 34443321 11234
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEE
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 293 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~ 293 (497)
..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++ .+.+.+++.||+++++++++++..+ ++++.
T Consensus 153 ~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~----~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~ 224 (319)
T 3cty_A 153 FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---EN----AYVQEIKKRNIPYIMNAQVTEIVGD-GKKVT 224 (319)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CH----HHHHHHHHTTCCEECSEEEEEEEES-SSSEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CH----HHHHHHhcCCcEEEcCCeEEEEecC-CceEE
Confidence 5689999999999999999999999999999999887642 33 3445567899999999999999864 44455
Q ss_pred EEEeC---CCc--EEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccc
Q 010917 294 AVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVE 367 (497)
Q Consensus 294 ~v~~~---~g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~ 367 (497)
.+.+. +|+ ++++|.||+|+|++|+.+++++++++.+ +|+|.||++++|+.|+|||+|||+..+..
T Consensus 225 ~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~--------- 295 (319)
T 3cty_A 225 GVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNFA--------- 295 (319)
T ss_dssp EEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCCC---------
T ss_pred EEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcchh---------
Confidence 66664 665 6999999999999999999999888765 58899999999999999999999986421
Q ss_pred cHHHHHHHHHHHHHHHhc
Q 010917 368 HVDHARQSAQHCIKALLS 385 (497)
Q Consensus 368 ~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|..+|+.+|.+|..
T Consensus 296 ~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 296 QIASAVGDGCKAALSLYS 313 (319)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 566799999999999864
No 61
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.4e-36 Score=292.98 Aligned_cols=278 Identities=21% Similarity=0.176 Sum_probs=206.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
++||+|||||+||+++|..|+++|+ +|+|||+++..... +.....+........ ......+.+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 66 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARK---NILLVDAGERRNRF-ASHSHGFLGQDGKAP-----------GEIIAEARRQI 66 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCCCGGGG-CSCCCSSTTCTTCCH-----------HHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCccccc-chhhcCCcCCCCCCH-----------HHHHHHHHHHH
Confidence 4799999999999999999999997 89999987532110 111111110000000 00012233444
Q ss_pred HHc-CcEEEeCCcEEEEecCC--CEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC---CcEEEecCHHHHHHHHHhh
Q 010917 140 KEK-GIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 213 (497)
Q Consensus 140 ~~~-~v~~~~~~~v~~i~~~~--~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~~~~~ 213 (497)
.+. +++++. ++|+.++.+. ..+.+++++++.||+||+|||+.|. .|.++|... .++++.. ......
T Consensus 67 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~-~~~~~g~~~~~~~~~~~~~------~~~~~~ 138 (297)
T 3fbs_A 67 ERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE-LPEIAGLRERWGSAVFHCP------YCHGYE 138 (297)
T ss_dssp TTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE-CCCCBTTGGGBTTTEESCH------HHHTGG
T ss_pred HhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC-CCCCCCchhhcCCeeEEcc------cCcchh
Confidence 455 688876 5899998765 3778888888999999999999876 455555432 3333321 111223
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEE
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 293 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~ 293 (497)
..+++++|+|+|.+|+|+|..|.+.| +|+++++.+.. +. ..+.+.+++.||+++. ++|++++.+ +
T Consensus 139 ~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~----~~~~~~l~~~gv~i~~-~~v~~i~~~--~--- 203 (297)
T 3fbs_A 139 LDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PD----ADQHALLAARGVRVET-TRIREIAGH--A--- 203 (297)
T ss_dssp GTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CC----HHHHHHHHHTTCEEEC-SCEEEEETT--E---
T ss_pred hcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CC----HHHHHHHHHCCcEEEc-ceeeeeecC--C---
Confidence 46899999999999999999999999 99999987652 23 3456778899999996 889999743 2
Q ss_pred EEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccC---C-CEEecCCCCCCCCcEEEeccccccCCccCCcccccccH
Q 010917 294 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSV---G-GIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 369 (497)
Q Consensus 294 ~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~---g-~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~ 369 (497)
.+.+.+|+++++|.||+++|++|+.+++++++++.+. | ++.||++++|+.|+|||+|||+..+. .+
T Consensus 204 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~~----------~~ 273 (297)
T 3fbs_A 204 DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPAG----------SV 273 (297)
T ss_dssp EEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTTC----------CH
T ss_pred eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCchH----------HH
Confidence 6788999999999999999999999999999988653 4 79999999999999999999998632 56
Q ss_pred HHHHHHHHHHHHHHhc
Q 010917 370 DHARQSAQHCIKALLS 385 (497)
Q Consensus 370 ~~A~~~g~~~a~~i~~ 385 (497)
..|..+|+.+|.+|..
T Consensus 274 ~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 274 ALAVGDGAMAGAAAHR 289 (297)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHH
Confidence 6788899999988853
No 62
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=6.6e-36 Score=292.27 Aligned_cols=287 Identities=21% Similarity=0.262 Sum_probs=208.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCcc-ccCCCCCCCCHh
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 137 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 137 (497)
.++||+||||||||++||..|++.|+ +|+|||++. .... ..... ....++++.. .........+.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~-~gg~-~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~ 73 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQL---STLILEKGM-PGGQ-IAWSE--------EVENFPGFPEPIAGMELAQRMHQ 73 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTGG-GGGCS--------CBCCSTTCSSCBCHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCC---cEEEEeCCC-CCcc-ccccc--------ccccCCCCCCCCCHHHHHHHHHH
Confidence 35799999999999999999999987 899999983 1100 00000 0001111100 000011123345
Q ss_pred HHHHcCcEEEeCCcEEEEecC--C---CEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC---CcEEEecCHHHHHHH
Q 010917 138 WYKEKGIEMIYQDPVTSIDIE--K---QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 209 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~--~---~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~ 209 (497)
.+++.+++++. .+|..++.. . ..+.+.+|+.+.||+||+|||+.|. .|.+++.+. .+++++. . .
T Consensus 74 ~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~i~g~~~~~~~~~~~~~---~---~ 145 (325)
T 2q7v_A 74 QAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR-KLGIPGEDNFWGKGVSTCA---T---C 145 (325)
T ss_dssp HHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC-CCCCTTTTTTBTTTEESCH---H---H
T ss_pred HHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC-CCCCCChhhccCceEEEec---c---C
Confidence 56778999988 589999876 3 4677788888999999999999876 454555431 3444332 1 1
Q ss_pred HHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHH-HHCCcEEEcCCeEEEEEeCC
Q 010917 210 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY-QQNGVKFVKGASIKNLEAGS 288 (497)
Q Consensus 210 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l-~~~GV~i~~~~~v~~i~~~~ 288 (497)
......+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+ .+.+ ++.||+++++++++++..
T Consensus 146 ~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~----~~~l~~~~gv~i~~~~~v~~i~~-- 216 (325)
T 2q7v_A 146 DGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVA----QARAFANPKMKFIWDTAVEEIQG-- 216 (325)
T ss_dssp HGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHH----HHHHHTCTTEEEECSEEEEEEEE--
T ss_pred CHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHH----HHHHHhcCCceEecCCceEEEcc--
Confidence 22345679999999999999999999999999999999887642 3332 2334 346999999999999985
Q ss_pred CCcEEEEEeC---CCc--EEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCc
Q 010917 289 DGRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 362 (497)
Q Consensus 289 ~~~v~~v~~~---~g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~ 362 (497)
++.+..+.+. +|+ ++++|.||+|+|++|+.++++++ +..+ +|++.||++++|+.|+|||+|||+..+.
T Consensus 217 ~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----- 290 (325)
T 2q7v_A 217 ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY----- 290 (325)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC-----
T ss_pred CCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCccCCCCEEEeecccCccH-----
Confidence 3455556664 665 79999999999999999998877 6654 6789999999999999999999998631
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 010917 363 TARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 363 ~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
..+..|..||+.+|.+|..
T Consensus 291 ----~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 291 ----RQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp ----CCHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHH
Confidence 1566799999999998864
No 63
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=2.4e-36 Score=293.29 Aligned_cols=285 Identities=22% Similarity=0.295 Sum_probs=208.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-CCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-RPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
+||+||||||||+++|..|++.|+ +|+|||+.....+. ...+. .+..........+...+.+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~---~v~li~~~~gG~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 66 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGI---RTGLMGERFGGQILDTVDIE------------NYISVPKTEGQKLAGALKVHV 66 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSTTGGGGGCCEEC------------CBTTBSSEEHHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCceeccccccc------------cccCcCCCCHHHHHHHHHHHH
Confidence 689999999999999999999987 89999864211000 00000 000000000000112334555
Q ss_pred HHcCcEEEeCCcEEEEecC-----CCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCC---CCcEEEecCHHHHHHHHH
Q 010917 140 KEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALIS 211 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~-----~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~~~ 211 (497)
++.+++++.+++|+.++++ ...+.+++++.+.||+||+|||+.|.. |.++|.+ ..+++++ ..+..
T Consensus 67 ~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~-~~~~g~~~~~~~~~~~~------~~~~~ 139 (310)
T 1fl2_A 67 DEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN-MNVPGEDQYRTKGVTYC------PHCDG 139 (310)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESC------HHHHG
T ss_pred HHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC-CCCCChhhcccceeEEe------ccCcH
Confidence 6779999999899999865 347788888889999999999998763 4455532 1234332 12223
Q ss_pred hhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHH-CCcEEEcCCeEEEEEeCCCC
Q 010917 212 SLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDG 290 (497)
Q Consensus 212 ~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~-~GV~i~~~~~v~~i~~~~~~ 290 (497)
....+++|+|||+|++|+|+|..|++.+.+|+++++.+.+. .++ .+.+.+++ .||+++++++++++..+ ++
T Consensus 140 ~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~----~~~~~l~~~~gv~v~~~~~v~~i~~~-~~ 211 (310)
T 1fl2_A 140 PLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQ----VLQDKLRSLKNVDIILNAQTTEVKGD-GS 211 (310)
T ss_dssp GGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCH----HHHHHHHTCTTEEEESSEEEEEEEES-SS
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccH----HHHHHHhhCCCeEEecCCceEEEEcC-CC
Confidence 44578999999999999999999999999999999998763 343 34455666 69999999999999854 45
Q ss_pred cEEEEEeCC---Cc--EEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCccc
Q 010917 291 RVAAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 364 (497)
Q Consensus 291 ~v~~v~~~~---g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~ 364 (497)
++..+.+.+ |+ ++++|.||+|+|++|+++++++. +..+ +|+|.||++++|+.|+|||+|||+..+..
T Consensus 212 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~------ 284 (310)
T 1fl2_A 212 KVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYK------ 284 (310)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSSC------
T ss_pred cEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCccCCCCEEEeecccCCcch------
Confidence 565566643 53 69999999999999999888764 5554 57899999999999999999999986532
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 010917 365 RVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 365 ~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|..+|+.+|.+|..
T Consensus 285 ---~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 285 ---QIIIATGEGAKASLSAFD 302 (310)
T ss_dssp ---CHHHHHHHHHHHHHHHHH
T ss_pred ---hhhhhHhhHHHHHHHHHH
Confidence 455688899999988864
No 64
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=9.3e-36 Score=289.63 Aligned_cols=289 Identities=21% Similarity=0.219 Sum_probs=207.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEE-EcCCCCCCCCCCCCCccccCCCCCCCCCCCCCc-cccCCCCCCCCH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKEAYAPYERPALTKGYLFPLDKKPARLPGFH-TCVGSGGERQTP 136 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~l-ie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~ 136 (497)
.++||+|||||+||++||..|+++|+ +|+| +|++.. ... +... .....++++. .........++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~li~e~~~~-gG~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGL---KNVVMFEKGMP-GGQ-------ITSS--SEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTC---SCEEEECSSST-TGG-------GGGC--SCBCCSTTCCSCBCHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---CeEEEEeCCCC-Cce-------eeee--ceeccCCCCCCCCCHHHHHHHHH
Confidence 35799999999999999999999998 7999 999432 100 0000 0000111111 000011112334
Q ss_pred hHHHHcCcEEEeCCcEEEEecCC--CEEE--ECCCcEEEeccEEeccCCCCCcCCCCCCCCC---CcEEEecCHHHHHHH
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEK--QTLI--TNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 209 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~--~~v~--~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~ 209 (497)
.++++.+++++.+ +|..+ .+. ..+. +..+..+.||+||+|||+.|. .|.++|... .+++... ..
T Consensus 70 ~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~-~~~~~g~~~~~~~~~~~~~------~~ 140 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK-KAGFKGEDEFFGKGVSTCA------TC 140 (315)
T ss_dssp HHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESCH------HH
T ss_pred HHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC-CCCCCChhhcCCCeEEeee------cc
Confidence 5556679999987 88888 444 3332 433328999999999999876 455566443 3444332 22
Q ss_pred HHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCC
Q 010917 210 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 289 (497)
Q Consensus 210 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~ 289 (497)
......+++++|+|+|.+|+|+|..|.+.+.+|+++++.+.+.. ++. .+.+.+++.||++++++.+.+++.. +
T Consensus 141 ~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~~-~ 213 (315)
T 3r9u_A 141 DGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---APS---TVEKVKKNEKIELITSASVDEVYGD-K 213 (315)
T ss_dssp HGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CHH---HHHHHHHCTTEEEECSCEEEEEEEE-T
T ss_pred cccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CHH---HHHHHHhcCCeEEEeCcEEEEEEcC-C
Confidence 23345689999999999999999999999999999999987632 333 3345567899999999999999864 4
Q ss_pred CcEEEEEeC--CCc--EEEcCEEEEeccCcCCCcchhh---cC-Cccc-CCCEEecCCCCCCCCcEEEeccccccCCccC
Q 010917 290 GRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSPFER---VG-LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY 360 (497)
Q Consensus 290 ~~v~~v~~~--~g~--~i~~D~vv~a~G~~p~~~~~~~---~g-l~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~ 360 (497)
+.+..+.+. +|+ ++++|.||+|+|++|+..+++. ++ +..+ +|++.||++++|+.|+|||+|||+..+.
T Consensus 214 ~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~--- 290 (315)
T 3r9u_A 214 MGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP--- 290 (315)
T ss_dssp TEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC---
T ss_pred CcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch---
Confidence 455556655 775 7999999999999999988766 54 7765 5889999999999999999999986432
Q ss_pred CcccccccHHHHHHHHHHHHHHHhc
Q 010917 361 DRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 361 g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
..+..|..+|+.+|.+|..
T Consensus 291 ------~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 291 ------KQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp ------CCHHHHHHHHHHHHHHHHH
T ss_pred ------hhhhhHHhhHHHHHHHHHH
Confidence 2567789999999998863
No 65
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=8.9e-36 Score=289.44 Aligned_cols=288 Identities=18% Similarity=0.228 Sum_probs=209.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCcc-ccCCCCCCCCHhHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPEWY 139 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 139 (497)
+||+|||||+||+++|..|++.|+. +|+|||++..... +... .....++++.. .........+.+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~--~v~lie~~~~gg~--------~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~ 69 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVK--NAVLFEKGMPGGQ--------ITGS--SEIENYPGVKEVVSGLDFMQPWQEQC 69 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCS--SEEEECSSSTTCG--------GGGC--SCBCCSTTCCSCBCHHHHHHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCC--cEEEEcCCCCCcc--------cccc--cccccCCCCcccCCHHHHHHHHHHHH
Confidence 6899999999999999999998862 7999999632110 0000 00001111100 00000112234455
Q ss_pred HHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC---CcEEEecCHHHHHHHHHhhc
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSLE 214 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~---~gv~~~~~~~~~~~~~~~~~ 214 (497)
++.+++++. ++|..++.+.+ .+.+.+++.+.||+||+|||+.+. .|.++|... ++++++.. ......
T Consensus 70 ~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~~~g~~~~~~~~~~~~~~------~~~~~~ 141 (311)
T 2q0l_A 70 FRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK-RTGIKGESEYWGKGVSTCAT------CDGFFY 141 (311)
T ss_dssp HTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTHHHHBTTTEESCHH------HHGGGG
T ss_pred HHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC-CCCCCChhhccCCcEEEeec------CChhhc
Confidence 667999988 78999987666 677788888999999999999876 454454321 34444321 122345
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHH-HCCcEEEcCCeEEEEEeCCCCcEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ-QNGVKFVKGASIKNLEAGSDGRVA 293 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~-~~GV~i~~~~~v~~i~~~~~~~v~ 293 (497)
.+++|+|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++. +.+.+. +.||++++++.+++++.. ++.+.
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~ 213 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPI----TLEHAKNNDKIEFLTPYVVEEIKGD-ASGVS 213 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEETTEEEEEEEEE-TTEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHH----HHHHHhhCCCeEEEeCCEEEEEECC-CCcEe
Confidence 68999999999999999999999999999999988763 3443 334444 479999999999999854 34444
Q ss_pred EEEeC---CCc--EEEcCEEEEeccCcCCCcchhhcC----Cccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcc
Q 010917 294 AVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVG----LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 363 (497)
Q Consensus 294 ~v~~~---~g~--~i~~D~vv~a~G~~p~~~~~~~~g----l~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~ 363 (497)
.+.+. +|+ ++++|.||+|+|++|++++++.++ +..+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 214 ~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~------ 287 (311)
T 2q0l_A 214 SLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP------ 287 (311)
T ss_dssp EEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC------
T ss_pred EEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch------
Confidence 56665 665 799999999999999999988775 7654 6889999999999999999999998631
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 010917 364 ARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 364 ~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
..+..|..||+.+|.+|..
T Consensus 288 ---~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 288 ---KQVVCAASDGATAALSVIS 306 (311)
T ss_dssp ---CCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhHHHHHHHHHH
Confidence 1567799999999999863
No 66
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2.1e-36 Score=297.21 Aligned_cols=295 Identities=18% Similarity=0.247 Sum_probs=210.3
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCcc-ccCCCCCCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQT 135 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~ 135 (497)
..+++||+|||||+||+++|..|+++|+ +|+|||+.+..... ..+.+... .....++++.. .........+
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~vie~~~~~~~~----~gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEI---KPILYEGMMANGIA----AGGQLTTT-TEIENFPGFPDGLTGSELMDRM 90 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTTBC----TTCGGGGS-SEECCSTTCTTCEEHHHHHHHH
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCCCCC----cCcccccc-hhhcccCCCcccCCHHHHHHHH
Confidence 4556899999999999999999999998 89999996521110 11111100 00011111111 0011112334
Q ss_pred HhHHHHcCcEEEeCCcEEEEecCCCEEEE-----CCCcEEEeccEEeccCCCCCcCCCCCCCC---CCcEEEecCHHHHH
Q 010917 136 PEWYKEKGIEMIYQDPVTSIDIEKQTLIT-----NSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADAD 207 (497)
Q Consensus 136 ~~~~~~~~v~~~~~~~v~~i~~~~~~v~~-----~~g~~i~~d~lvlAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~ 207 (497)
.+++++.+++++.++ |..++.+...+.+ .++..+.||+||+|||+.+. .|.++|.. ..++.+. .
T Consensus 91 ~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~-~~~~~g~~~~~~~~~~~~------~ 162 (338)
T 3itj_A 91 REQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK-RMHLPGEETYWQKGISAC------A 162 (338)
T ss_dssp HHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC-CCCCTTHHHHBTTTEESC------H
T ss_pred HHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC-CCCCCCchhccCccEEEc------h
Confidence 556677899999986 9999987765544 46678999999999999876 34444422 1233332 1
Q ss_pred HHHHh--hccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHC-CcEEEcCCeEEEE
Q 010917 208 ALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN-GVKFVKGASIKNL 284 (497)
Q Consensus 208 ~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~-GV~i~~~~~v~~i 284 (497)
..... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.++. ...+.+.+.+. ||++++++.++++
T Consensus 163 ~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v~~i 235 (338)
T 3itj_A 163 VCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVALEA 235 (338)
T ss_dssp HHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEEEEE
T ss_pred hcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeecceeEEE
Confidence 12222 34689999999999999999999999999999999987654 23344556555 9999999999999
Q ss_pred EeCCCCcEEEEEeCC-----CcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEe-cCCCCCCCCcEEEeccccccCC
Q 010917 285 EAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQV-DGQFRTRMPGIFAIGDVAAFPL 357 (497)
Q Consensus 285 ~~~~~~~v~~v~~~~-----g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~v-d~~~~t~~~~iya~GD~~~~~~ 357 (497)
+.+ ++.+..+.+.+ ++++++|.||+|+|++|+..+++. ++..+ +|++.+ |++++|+.|+|||+|||+..+.
T Consensus 236 ~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~ 313 (338)
T 3itj_A 236 KGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY 313 (338)
T ss_dssp EES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSC
T ss_pred Ecc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCc
Confidence 865 44555677665 467999999999999999988876 77765 677874 8899999999999999998432
Q ss_pred ccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 358 KMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 358 ~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
..+..|..+|+.||.+|..
T Consensus 314 ---------~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 314 ---------RQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHH
T ss_pred ---------cceeeehhhhHHHHHHHHH
Confidence 1566788999999988864
No 67
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=3.4e-36 Score=293.58 Aligned_cols=291 Identities=19% Similarity=0.243 Sum_probs=212.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCcc-ccCCCCCCCCHhH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPEW 138 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 138 (497)
++||+|||||+||+++|..|++.|+ +|+|+|+..... .+.... ....++++.. ........++..+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 71 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANL---QPVLITGMEKGG--------QLTTTT--EVENWPGDPNDLTGPLLMERMHEH 71 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC---CCEEECCSSTTG--------GGGGCS--BCCCSTTCCSSCBHHHHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---cEEEEccCCCCc--------eEecch--hhhhCCCCCCCCCHHHHHHHHHHH
Confidence 4799999999999999999999987 799999752110 000000 0001111110 0000111223445
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEE-ECCCcEEEeccEEeccCCCCCcCCCCCCCC---CCcEEEecCHHHHHHHHHhhc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLI-TNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALISSLE 214 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~-~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~~~~~~ 214 (497)
+++.+++++.+ ++..++.....+. +.++..+.||+||+|||+.+.. |.+++.. ..+++... .....+.
T Consensus 72 ~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~-~~~~g~~~~~~~~~~~~~------~~~~~~~ 143 (320)
T 1trb_A 72 ATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARY-LGLPSEEAFKGRGVSACA------TSDGFFY 143 (320)
T ss_dssp HHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECC-CCCHHHHHTBTTTEESCH------HHHGGGG
T ss_pred HHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCC-CCCCChHHhCCceeEecc------cCCcccc
Confidence 66789999987 4999987665433 5677789999999999998763 4444421 12343322 1222345
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 294 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~ 294 (497)
.+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++.+.+.+.+.+++.||++++++++++++.+ ++.+..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~ 219 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---AEKILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTG 219 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---CCHHHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---cCHHHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEE
Confidence 78999999999999999999999999999999988764 36777888888899999999999999999864 445656
Q ss_pred EEeCC----C--cEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCC-----CCCCCcEEEeccccccCCccCCcc
Q 010917 295 VKLED----G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQF-----RTRMPGIFAIGDVAAFPLKMYDRT 363 (497)
Q Consensus 295 v~~~~----g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~-----~t~~~~iya~GD~~~~~~~~~g~~ 363 (497)
+.+.+ | +++++|.||+|+|++|+.++++ .++..++|++.||+++ +|+.|+|||+|||+..+..
T Consensus 220 v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~----- 293 (320)
T 1trb_A 220 VRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYR----- 293 (320)
T ss_dssp EEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSC-----
T ss_pred EEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-ccccccCceEEECCCcccccccCCCCCEEEcccccCCcch-----
Confidence 66654 4 5799999999999999998877 4565557889999987 8999999999999986422
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 010917 364 ARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 364 ~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|..+|+.+|.+|..
T Consensus 294 ----~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 294 ----QAITSAGTGCMAALDAER 311 (320)
T ss_dssp ----CHHHHHHHHHHHHHHHHH
T ss_pred ----hhhhhhccHHHHHHHHHH
Confidence 456688888888888853
No 68
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2e-36 Score=293.06 Aligned_cols=285 Identities=14% Similarity=0.122 Sum_probs=197.3
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
+++.+||+||||||||++||.+|+++|+ +|+|||++.....- .....++.......+. ++.....
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~---~v~lie~~~~gg~~-~~~~~~~~~~~~~~~~-----------~~~~~~~ 67 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARK---QIALFDNNTNRNRV-TQNSHGFITRDGIKPE-----------EFKEIGL 67 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCGGGG-SSCBCCSTTCTTBCHH-----------HHHHHHH
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCCee-eeecCCccCCCCCCHH-----------HHHHHHH
Confidence 4567899999999999999999999998 89999987421100 0000011100000000 0001112
Q ss_pred hHHHHcC-cEEEeCCcEEEEecC---CCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCC---CCcEEEecCHHHHHHH
Q 010917 137 EWYKEKG-IEMIYQDPVTSIDIE---KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADAL 209 (497)
Q Consensus 137 ~~~~~~~-v~~~~~~~v~~i~~~---~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~ 209 (497)
+.+.+++ +.+.. ..+..++.. .+++.+.+++++.||+||||||++|+ .|.++|.+ ..++.+. ...
T Consensus 68 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~-~p~i~G~~~~~~~~v~~~------~~~ 139 (304)
T 4fk1_A 68 NEVMKYPSVHYYE-KTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE-FPSIPNVREYYGKSLFSC------PYC 139 (304)
T ss_dssp HHHTTSTTEEEEE-CCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE-CCSCTTHHHHBTTTEESC------HHH
T ss_pred HHHHhcCCEEEEe-eEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc-cccccCccccccceeeec------ccc
Confidence 2233333 55554 455555432 34788899999999999999999987 45555532 1233322 222
Q ss_pred HHhhccCCeEEEEcCCH-HHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCC
Q 010917 210 ISSLEKAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 288 (497)
Q Consensus 210 ~~~~~~~~~vvVvG~G~-~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~ 288 (497)
.....++++++|||+|. .++|+|..+.+.+.+|+++.+.+.+.. .+.+.+++.|++++.+. +..+.. +
T Consensus 140 ~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~---------~~~~~l~~~g~~~~~~~-v~~~~~-~ 208 (304)
T 4fk1_A 140 DGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQ---------TIMDELSNKNIPVITES-IRTLQG-E 208 (304)
T ss_dssp HSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCH---------HHHHHHHTTTCCEECSC-EEEEES-G
T ss_pred chhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccchh---------hhhhhhhccceeEeeee-EEEeec-C
Confidence 23334677888888875 568999999999999999988765432 34566889999999875 777764 3
Q ss_pred CCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCcccccc
Q 010917 289 DGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVE 367 (497)
Q Consensus 289 ~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~ 367 (497)
++.+..+.+++|+++++|.++++.|.+|+..++++++++.+ +|+|.||+++|||.|+|||+|||+..+..
T Consensus 209 ~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~--------- 279 (304)
T 4fk1_A 209 GGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPS--------- 279 (304)
T ss_dssp GGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCC---------
T ss_pred CCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcch---------
Confidence 56677899999999999999999888888889999999876 56799999999999999999999975422
Q ss_pred cHHHHHHHHHHHHHHHh
Q 010917 368 HVDHARQSAQHCIKALL 384 (497)
Q Consensus 368 ~~~~A~~~g~~~a~~i~ 384 (497)
.+..|..+|+.||.+|.
T Consensus 280 ~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 280 SLIIAASQGNKAAIAIN 296 (304)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34568888888887774
No 69
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=1.7e-35 Score=298.51 Aligned_cols=288 Identities=20% Similarity=0.221 Sum_probs=221.8
Q ss_pred CcEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 010917 61 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 137 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~---~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (497)
++|+|||||+||+++|..|++ .|+ +|+|||+++.+.|. |.+.. .........++ ...+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~---~V~vie~~~~~~~~-~~~~~--~~~~~~~~~~~-----------~~~~~~ 64 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA---DVKVINKSRFSYFR-PALPH--VAIGVRDVDEL-----------KVDLSE 64 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS---EEEEEESSSEEEEC-CSSCC--CCSSCCCCCCE-----------EEEHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEeCCCCceec-cchhh--cccCCcCHHHH-----------HHHHHH
Confidence 689999999999999999999 766 89999999876443 33221 11111111111 234556
Q ss_pred HHHHcCcEEEeCCcEEEEecCCCEEEECCCcE----EEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhh
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL----LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 213 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~----i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~ 213 (497)
.+++.+++++.+ +|+.++.+.+.+++.++.. +.||+||+|||+.+. .+.++|... ....+.+..+...+.+.+
T Consensus 65 ~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~-~~~ipG~~~-~~~~~~~~~~~~~~~~~l 141 (409)
T 3h8l_A 65 ALPEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA-TELVKGWDK-YGYSVCEPEFATKLREKL 141 (409)
T ss_dssp HTGGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC-GGGSBTHHH-HCEESSSTTHHHHHHHHH
T ss_pred HHhhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC-ccCCCChhh-cCcCcCCHHHHHHHHHHH
Confidence 677889999986 9999999999999888764 999999999999876 344555322 344555666666666554
Q ss_pred cc-CCeEEEEcCCH-------------------------HHHHHH----HHHHhCCC----cEEEEecCCcchhhccCHH
Q 010917 214 EK-AKKVVVVGGGY-------------------------IGMEVA----AAAVGWKL----DTTIIFPENHLLQRLFTPS 259 (497)
Q Consensus 214 ~~-~~~vvVvG~G~-------------------------~g~e~A----~~l~~~g~----~Vtlv~~~~~~~~~~~~~~ 259 (497)
.. .++++|||+|. .++|+| ..+.+.|. +|+++++.+ +++. +++.
T Consensus 142 ~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~-~~~~ 219 (409)
T 3h8l_A 142 ESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSD-LSPN 219 (409)
T ss_dssp HHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTT-BCHH
T ss_pred HHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccc-cCHH
Confidence 43 26777999991 466776 45667774 899999988 6653 7899
Q ss_pred HHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhc--CCcccCCCEEecC
Q 010917 260 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV--GLNSSVGGIQVDG 337 (497)
Q Consensus 260 ~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~--gl~~~~g~i~vd~ 337 (497)
+.+.+.+.+++.||+++++++|++++.+ .+.+++|+++++|.||+++|++|+ .+++++ ++..++|++.||+
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l~~~~G~i~vd~ 292 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDLVDDGGFIPTDL 292 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECSS------EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGGSCTTSCBCBBT
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECCC------eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccCcCCCCCEEeCc
Confidence 9999999999999999999999999743 478899999999999999999998 677777 5544567899999
Q ss_pred CCCC-CCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 338 QFRT-RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 338 ~~~t-~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
++|| +.|||||+|||+..+.+. .+..|..||+.+|+||.+
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~~--------~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVPK--------LGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCSC--------CHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEeehhccCCCCc--------HHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999864322 556799999999999975
No 70
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=1e-35 Score=299.53 Aligned_cols=297 Identities=19% Similarity=0.209 Sum_probs=220.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.|||||||||+||++||..|++.+. +.+|||||+++.+.|. | ++..++... .....+ ....+.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~~-p-~~~~v~~g~-~~~~~~------------~~~~~~~ 65 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYTC-Y-MSNEVIGGD-RELASL------------RVGYDGL 65 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEECS-T-THHHHHHTS-SCGGGG------------EECSHHH
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCCc-c-CHHHHhcCC-CCHHHH------------hhCHHHH
Confidence 4799999999999999999999886 6799999998765332 3 322222111 111111 2334567
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCC----CCcEEEecCHHHHHHHHHhhc-
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIRDVADADALISSLE- 214 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~----~~gv~~~~~~~~~~~~~~~~~- 214 (497)
.+.|++++. .+|+.+|++.+++++.+|.++.||+||+|||+.+. .+.++|.. ...++.+.+..+...+.+.+.
T Consensus 66 ~~~gv~~i~-~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~-~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (401)
T 3vrd_B 66 RAHGIQVVH-DSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL-YDKIEGYSEALAAKLPHAWKAGEQTALLRRQLES 143 (401)
T ss_dssp HHTTCEEEC-SCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-GGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH
T ss_pred HHCCCEEEE-eEEEEEEccCcEEEecccceeecceeeeccCCccc-cCCccCchhhcccCccceeccHHHHHHHHHHHHh
Confidence 788999987 48999999999999999999999999999999876 45555532 223445556666666555443
Q ss_pred --cCCeEEEEcCC------H----HHHHHHHHHHhCC--CcEEEEecCCcchh-hccCHHHHHHHHHHHHHCCcEEEcCC
Q 010917 215 --KAKKVVVVGGG------Y----IGMEVAAAAVGWK--LDTTIIFPENHLLQ-RLFTPSLAQRYEQLYQQNGVKFVKGA 279 (497)
Q Consensus 215 --~~~~vvVvG~G------~----~g~e~A~~l~~~g--~~Vtlv~~~~~~~~-~~~~~~~~~~~~~~l~~~GV~i~~~~ 279 (497)
.+..+++.+++ . .+.+++..+.+.+ .+|+++++.+.+.. ..+++.+.+.+.+.+++.||++++++
T Consensus 144 ~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 223 (401)
T 3vrd_B 144 MDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGP 223 (401)
T ss_dssp SCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTT
T ss_pred cccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCc
Confidence 34444444322 1 3456666666655 57999998887632 23566777777778899999999999
Q ss_pred eEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCC-CC-CCCCcEEEecccccc-C
Q 010917 280 SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FR-TRMPGIFAIGDVAAF-P 356 (497)
Q Consensus 280 ~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~-~~-t~~~~iya~GD~~~~-~ 356 (497)
++..++.+.+.. .+.+++|+++++|.+++++|.+|+ .+++++++..++|+|.||++ +| |++|||||+|||+.. +
T Consensus 224 ~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~~~~-~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~ 300 (401)
T 3vrd_B 224 DAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQRAG-KIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAP 300 (401)
T ss_dssp TTCEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC-HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTT
T ss_pred eEEEEEecccce--EEEcCCCcEEEeeEEEEecCcCCc-hhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCC
Confidence 999887654433 578899999999999999999998 78899999888889999986 65 799999999999864 3
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 357 LKMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 357 ~~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+ .+...|..||+.+|+||++
T Consensus 301 ~p--------k~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 301 MP--------KSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp SC--------BSHHHHHHHHHHHHHHHHH
T ss_pred CC--------chHHHHHHHHHHHHHHHHH
Confidence 22 2556699999999999964
No 71
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3e-36 Score=305.51 Aligned_cols=302 Identities=20% Similarity=0.203 Sum_probs=214.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.|+|||||||+||++||..|++.+. +.+|||||+++++.|. |.++. +... .....++ ...+.+++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~-~~~VtlI~~~~~~~~~-p~l~~-v~~g-~~~~~~i-----------~~~~~~~~ 66 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLL 66 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTG
T ss_pred CCcEEEECCCHHHHHHHHHHhccCc-CCeEEEEcCCCCCccC-ccHHH-HhcC-CCCHHHh-----------hhcHHHHH
Confidence 3689999999999999999999885 6799999999988774 44331 1111 1111111 12344566
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhh---ccC
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL---EKA 216 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~---~~~ 216 (497)
++.|++++.+ +|+.||+++++|++++|++++||+||||||+++. + .++|.. ++...+.+..++..+.+.+ ...
T Consensus 67 ~~~gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~-~i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~ 142 (430)
T 3hyw_A 67 PKFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-F-GAEGQE-ENSTSICTAEHALETQKKLQELYAN 142 (430)
T ss_dssp GGGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-C-CSBTHH-HHSCCCSSHHHHHHHHHHHHHHHHS
T ss_pred HHCCcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-C-CccCcc-cCcCCcccHHHHHHHHHHHHhhccC
Confidence 7789999875 8999999999999999999999999999999753 3 344432 2345566777776665543 345
Q ss_pred CeEEEEcCCH------HHHHHH----HHHHhCC----CcEEEEecCCcchh--hccCHHHHHHHHHHHHHCCcEEEcCCe
Q 010917 217 KKVVVVGGGY------IGMEVA----AAAVGWK----LDTTIIFPENHLLQ--RLFTPSLAQRYEQLYQQNGVKFVKGAS 280 (497)
Q Consensus 217 ~~vvVvG~G~------~g~e~A----~~l~~~g----~~Vtlv~~~~~~~~--~~~~~~~~~~~~~~l~~~GV~i~~~~~ 280 (497)
+.++|+|++. .+.|++ ..+.+.+ .+|++++..+.+.. ....+...+.+++.++++||++++++.
T Consensus 143 ~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~ 222 (430)
T 3hyw_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVA 222 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCE
T ss_pred CceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCce
Confidence 5566666542 233443 4455555 46888887765532 224566778899999999999999999
Q ss_pred EEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEeccCcCCCcchhhcCCc--cc-CCCEEecCCCC-CCCCcEEEeccccc
Q 010917 281 IKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERVGLN--SS-VGGIQVDGQFR-TRMPGIFAIGDVAA 354 (497)
Q Consensus 281 v~~i~~~~~~~v~~v~~~~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~--~~-~g~i~vd~~~~-t~~~~iya~GD~~~ 354 (497)
|++++.+ .+ .+...+| +++++|.+++++|.+|+ +++..++.. .+ +|++.||+++| |++|||||+|||+.
T Consensus 223 v~~v~~~---~~-~~~~~~g~~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~ 297 (430)
T 3hyw_A 223 VKAIEPD---KV-IYEDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTA 297 (430)
T ss_dssp EEEECSS---EE-EEECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBC
T ss_pred EEEEeCC---ce-EEEeeCCCceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEe
Confidence 9999732 22 2333343 57999999999999998 666666543 33 45689999999 79999999999998
Q ss_pred cCCccCCc--ccccccHHHHHHHHHHHHHHHhc
Q 010917 355 FPLKMYDR--TARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 355 ~~~~~~g~--~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+...... .....+.+.|.+||+.+|+||+.
T Consensus 298 ~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 298 IPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp CCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 77532111 11123556799999999999975
No 72
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=1.1e-35 Score=302.19 Aligned_cols=304 Identities=18% Similarity=0.187 Sum_probs=221.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 60 NREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~---~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
+++|||||||+||++||..|++ .|+ +|+|||+++.+.|. |.+.. +... .....++ ...+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~---~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~l~ 66 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGH---EVTLISANDYFQFV-PSNPW-VGVG-WKERDDI-----------AFPIR 66 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGS---EEEEECSSSEEECG-GGHHH-HHHT-SSCHHHH-----------EEECH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcC---EEEEEeCCCCCccc-CCccc-cccC-ccCHHHH-----------HHHHH
Confidence 5799999999999999999999 666 89999999876553 22111 1100 0011111 23467
Q ss_pred hHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC--CcEEEecCHHHHHHHHHhhc
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL--PGVHYIRDVADADALISSLE 214 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~--~gv~~~~~~~~~~~~~~~~~ 214 (497)
+++++.+++++. .+|+.++++.+++.+++++++.||+||+|||+.+. .+.++|... .....+.+..++..+.+.+.
T Consensus 67 ~~~~~~gv~~~~-~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~-~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~ 144 (437)
T 3sx6_A 67 HYVERKGIHFIA-QSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA-FENVPGSDPHEGPVQSICTVDHAERAFAEYQ 144 (437)
T ss_dssp HHHHTTTCEEEC-SCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC-GGGSTTCSTTTSSEECCSSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEE-eEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC-cccCCCCCcccCcceecccccHHHHHHHHHH
Confidence 778889999986 69999999999999999999999999999999887 455667543 24555667777766554332
Q ss_pred ---cCCeEEEEcCCHH----H--HHHH----HHHHhCCCc-----EEEEecCCcchhhcc--CHHHHHHHHHHHHHCCcE
Q 010917 215 ---KAKKVVVVGGGYI----G--MEVA----AAAVGWKLD-----TTIIFPENHLLQRLF--TPSLAQRYEQLYQQNGVK 274 (497)
Q Consensus 215 ---~~~~vvVvG~G~~----g--~e~A----~~l~~~g~~-----Vtlv~~~~~~~~~~~--~~~~~~~~~~~l~~~GV~ 274 (497)
.+++++|||+|.. | +|+| ..+.+.|.+ |+++++.+.+....+ .++....+.+.++++||+
T Consensus 145 ~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~ 224 (437)
T 3sx6_A 145 ALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIE 224 (437)
T ss_dssp HHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCE
T ss_pred HHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCE
Confidence 2556788888554 4 7777 666677875 999999987633111 135778889999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEeCC-----CcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCC-CCCcEEE
Q 010917 275 FVKGASIKNLEAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRT-RMPGIFA 348 (497)
Q Consensus 275 i~~~~~v~~i~~~~~~~v~~v~~~~-----g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t-~~~~iya 348 (497)
++++++|++++. ++........+ ++++++|.+++++|++++..+.+..++..++|+|.||+++|| ++|||||
T Consensus 225 ~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa 302 (437)
T 3sx6_A 225 AYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFA 302 (437)
T ss_dssp EECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEE
T ss_pred EEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEEE
Confidence 999999999983 22111111233 567999999999999988555444677666788999999999 9999999
Q ss_pred eccccccCCccCCcc---cccccHHHHHHHHHHHHHHHhc
Q 010917 349 IGDVAAFPLKMYDRT---ARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 349 ~GD~~~~~~~~~g~~---~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
+|||+..+... +.. ....+...|..||+.+|+||..
T Consensus 303 ~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~ 341 (437)
T 3sx6_A 303 AGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKA 341 (437)
T ss_dssp CGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999876421 110 0133667799999999999975
No 73
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=6.7e-35 Score=286.10 Aligned_cols=294 Identities=19% Similarity=0.242 Sum_probs=204.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCcc-ccCCCCCCCCHh
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 137 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 137 (497)
.++||+|||||++|+++|..|++.|+ +|+|||+...... .....+... .....++.+.. .........+.+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~---~v~lie~~~~~~~---~~gg~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 78 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAEL---KPLLFEGWMANDI---APGGQLTTT--TDVENFPGFPEGILGVELTDKFRK 78 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTTB---CTTCGGGGC--SEECCSTTCTTCEEHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeccCcccc---CCCceeeec--cccccCCCCccCCCHHHHHHHHHH
Confidence 34799999999999999999999988 8999998210000 000000000 00011111110 000011122344
Q ss_pred HHHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC-------CcEEEecCHHHHHH
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL-------PGVHYIRDVADADA 208 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~-------~gv~~~~~~~~~~~ 208 (497)
++++.+++++.++ |..++.... ++.+ ++..+.||+||+|||+.+.. |.+++... .+++.. ..
T Consensus 79 ~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~-~~~~g~~~~~~~~~~~~~~~~------~~ 149 (333)
T 1vdc_A 79 QSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR-LSFVGSGEVLGGFWNRGISAC------AV 149 (333)
T ss_dssp HHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC-CCCBTCSSSSSCCBTTTEESC------HH
T ss_pred HHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC-CCCCCccccccccccCcEEEe------cc
Confidence 5667899999875 888987655 5666 67789999999999998764 44555432 233322 11
Q ss_pred HHHhh--ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEe
Q 010917 209 LISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 286 (497)
Q Consensus 209 ~~~~~--~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~ 286 (497)
..... ..+++|+|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..+.+++.||++++++++.+++.
T Consensus 150 ~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~~~~~~~gv~i~~~~~v~~i~~ 223 (333)
T 1vdc_A 150 CDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQRALSNPKIDVIWNSSVVEAYG 223 (333)
T ss_dssp HHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEE
T ss_pred CccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HHHHHhCCCeeEecCCceEEEeC
Confidence 22222 5689999999999999999999999999999999887642 2222 22445678999999999999986
Q ss_pred CCCC-cEEEEEeC---CC--cEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCC-CCCCCCcEEEeccccccCCc
Q 010917 287 GSDG-RVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLK 358 (497)
Q Consensus 287 ~~~~-~v~~v~~~---~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~-~~t~~~~iya~GD~~~~~~~ 358 (497)
++++ .+..+.+. +| +++++|.||+|+|++|+.++++ .++..+ +|++.||++ ++|+.|+|||+|||+..+..
T Consensus 224 ~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~ 302 (333)
T 1vdc_A 224 DGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYR 302 (333)
T ss_dssp SSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCC
T ss_pred CCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCch
Confidence 4321 55455554 45 5799999999999999998876 466654 678999997 68999999999999986421
Q ss_pred cCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 359 MYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 359 ~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|..+|+.+|.+|..
T Consensus 303 ---------~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 303 ---------QAITAAGTGCMAALDAEH 320 (333)
T ss_dssp ---------CHHHHHHHHHHHHHHHHH
T ss_pred ---------hHHHHHHhHHHHHHHHHH
Confidence 456688888888888753
No 74
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-34 Score=284.33 Aligned_cols=289 Identities=18% Similarity=0.298 Sum_probs=202.8
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCcc-ccCCCCCCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQT 135 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~ 135 (497)
++.++||+|||||+||+++|..|++.|+ +|+|||+..... .+.... ....++++.. ........++
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg--------~~~~~~--~~~~~~~~~~~~~~~~~~~~l 77 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQL---APLVFEGTSFGG--------ALMTTT--DVENYPGFRNGITGPELMDEM 77 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTC---CCEEECCSSCSC--------GGGSCS--CBCCSTTCTTCBCHHHHHHHH
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCC--------ceeccc--hhhhcCCCCCCCCHHHHHHHH
Confidence 3456899999999999999999999988 899999752111 001000 0011111110 0000111233
Q ss_pred HhHHHHcCcEEEeCCcEEEEecCC-CEE-EECCCcEEEeccEEeccCCCCCcCCCCCCCC---CCcEEEecCHHHHHHHH
Q 010917 136 PEWYKEKGIEMIYQDPVTSIDIEK-QTL-ITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALI 210 (497)
Q Consensus 136 ~~~~~~~~v~~~~~~~v~~i~~~~-~~v-~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~~ 210 (497)
.+++++.+++++.++ |..++... .++ .+++++.+.||+||+|||+.+. .|.++|.. ..+++.+. ...
T Consensus 78 ~~~~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~-~~~i~g~~~~~~~~~~~~~------~~~ 149 (335)
T 2a87_A 78 REQALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR-YLQVPGEQELLGRGVSSCA------TCD 149 (335)
T ss_dssp HHHHHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC-CCCCTHHHHTBTTTEESCH------HHH
T ss_pred HHHHHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc-CCCCCchHhccCCceEEee------ccc
Confidence 455667899999875 88888732 367 7788888999999999999876 34444421 12333321 122
Q ss_pred HhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCC
Q 010917 211 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG 290 (497)
Q Consensus 211 ~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~ 290 (497)
..+..+++|+|||+|.+|+|+|..|++.|.+|+++++.+.+.. .+.+ ..+.+++.||++++++++++++.+ +
T Consensus 150 ~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~~~~~~~gV~v~~~~~v~~i~~~--~ 221 (335)
T 2a87_A 150 GFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIM---LDRARNNDKIRFLTNHTVVAVDGD--T 221 (335)
T ss_dssp GGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTH---HHHHHHCTTEEEECSEEEEEEECS--S
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHH---HHHHhccCCcEEEeCceeEEEecC--C
Confidence 2345689999999999999999999999999999999887643 2222 124456789999999999999854 2
Q ss_pred cEEEEEeC---CC--cEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCC-CCCCCCcEEEeccccccCCccCCcc
Q 010917 291 RVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDRT 363 (497)
Q Consensus 291 ~v~~v~~~---~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~-~~t~~~~iya~GD~~~~~~~~~g~~ 363 (497)
.+..+.+. +| +++++|.||+|+|++|++++++ .++..+ +|++.||++ ++|+.|+|||+|||+..+..
T Consensus 222 ~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~----- 295 (335)
T 2a87_A 222 TVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYR----- 295 (335)
T ss_dssp SCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCC-----
T ss_pred cEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHH-----
Confidence 32234443 44 5799999999999999998876 456654 688999995 68999999999999986421
Q ss_pred cccccHHHHHHHHHHHHHHHh
Q 010917 364 ARVEHVDHARQSAQHCIKALL 384 (497)
Q Consensus 364 ~~~~~~~~A~~~g~~~a~~i~ 384 (497)
.+..|..+|+.+|.+|.
T Consensus 296 ----~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 296 ----QAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp ----CHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHhHHHHHHHHH
Confidence 45567888888888875
No 75
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=4.3e-34 Score=296.07 Aligned_cols=289 Identities=21% Similarity=0.298 Sum_probs=211.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 137 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (497)
...+||+||||||||++||..|+++|+ +|+|+|+.....+... .+ ...+.......+..+...+.+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~---~v~lie~~~GG~~~~~---~~--------~~~~~~~~~~~~~~l~~~l~~ 275 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGI---RTGLMGERFGGQVLDT---VD--------IENYISVPKTEGQKLAGALKA 275 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSTTGGGTTC---SC--------BCCBTTBSSBCHHHHHHHHHH
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCC---eEEEEECCCCCccccc---cc--------ccccCCCCCCCHHHHHHHHHH
Confidence 346799999999999999999999988 8999986421100000 00 000111000000011123345
Q ss_pred HHHHcCcEEEeCCcEEEEecC-----CCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCC---CCcEEEecCHHHHHHH
Q 010917 138 WYKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADAL 209 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~-----~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~---~~gv~~~~~~~~~~~~ 209 (497)
.+++.|++++.+++|+.++++ ...+.+++|..+.||+||+|||+.++. +.++|.. ..+++++....
T Consensus 276 ~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~-~~ipG~~~~~~~~v~~~~~~~----- 349 (521)
T 1hyu_A 276 HVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN-MNVPGEDQYRTKGVTYCPHCD----- 349 (521)
T ss_dssp HHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTTTTTEECCTTCC-----
T ss_pred HHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC-CCCCChhhhcCceEEEeecCc-----
Confidence 566789999999999999864 457888888889999999999998764 4455542 23455443211
Q ss_pred HHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHH-CCcEEEcCCeEEEEEeCC
Q 010917 210 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGS 288 (497)
Q Consensus 210 ~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~-~GV~i~~~~~v~~i~~~~ 288 (497)
.....+++|+|||+|++|+|+|..|++.|.+|+++++.+.+.. + ..+.+.+++ .||+++++++++++..+
T Consensus 350 -~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~~~- 420 (521)
T 1hyu_A 350 -GPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVKGD- 420 (521)
T ss_dssp -GGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEEEC-
T ss_pred -hhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEEcC-
Confidence 1234689999999999999999999999999999999987753 2 245566777 69999999999999854
Q ss_pred CCcEEEEEeCC---Cc--EEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCCCCCCcEEEeccccccCCccCCc
Q 010917 289 DGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 362 (497)
Q Consensus 289 ~~~v~~v~~~~---g~--~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~ 362 (497)
++++..+.+.+ |+ ++++|.|++++|++||++++++. +..+ +|+|.||++++|+.|+|||+|||+..+..
T Consensus 421 ~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~-l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~---- 495 (521)
T 1hyu_A 421 GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGA-LERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYK---- 495 (521)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSSC----
T ss_pred CCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhh-hccCCCCcEEeCCCCCCCCCCEEEeecccCCCcc----
Confidence 45665666643 53 69999999999999999988763 6554 68899999999999999999999986532
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 010917 363 TARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 363 ~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|+.+|..||.++..
T Consensus 496 -----~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 496 -----QIIIATGEGAKASLSAFD 513 (521)
T ss_dssp -----CHHHHHHHHHHHHHHHHH
T ss_pred -----eeeehHHhHHHHHHHHHH
Confidence 455688888888888753
No 76
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=8.8e-35 Score=287.69 Aligned_cols=300 Identities=16% Similarity=0.221 Sum_probs=197.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccC-------CCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVG-------SGGE 132 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~-------~~~~ 132 (497)
++||+|||||++|+++|..|+++|+ +|+|||+++...-...................++++..... ....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~---~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGL---SYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVL 79 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSC---CEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHH
Confidence 4799999999999999999999998 89999998653200000000000000000001111100000 0011
Q ss_pred CCCHhHHHHcCcEEEeCCcEEEEecCCCE---EEECCCcEEEeccEEeccCCCCC-cCCCCCCCCC-CcE-EEecCHHHH
Q 010917 133 RQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTAS-RFPEKIGGYL-PGV-HYIRDVADA 206 (497)
Q Consensus 133 ~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~~g~~i~~d~lvlAtG~~~~-~~~~~~g~~~-~gv-~~~~~~~~~ 206 (497)
.++.+.+++.+++++++++|+.++.+... +.++++ ++.||+||+|||.... ..|.++|... .+. .+...+.+
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 157 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYST- 157 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCC-
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCC-
Confidence 22334456779999999999999987765 666676 7999999999996322 1354455321 121 11111111
Q ss_pred HHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC-Ccchhhcc-CHHHHHHHHHHHH---------------
Q 010917 207 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHLLQRLF-TPSLAQRYEQLYQ--------------- 269 (497)
Q Consensus 207 ~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~-~~~~~~~~-~~~~~~~~~~~l~--------------- 269 (497)
.....+++|+|||+|.+|+|+|..|++.+ +|+++++. +.+++... +..+...+.+.+.
T Consensus 158 ----~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
T 4a9w_A 158 ----PAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGF 232 (357)
T ss_dssp ----SGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC---------------------
T ss_pred ----hhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccc
Confidence 11235799999999999999999999998 69999987 45554322 2333333322222
Q ss_pred -------------HCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEec
Q 010917 270 -------------QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVD 336 (497)
Q Consensus 270 -------------~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd 336 (497)
+.|+ +..+..+.+++.. .+.+.+|+++++|.||+|+|++|++++++++++..++|++.||
T Consensus 233 ~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~------~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i~vd 305 (357)
T 4a9w_A 233 GDIVMVPPVLDARARGV-LAAVPPPARFSPT------GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQVEVD 305 (357)
T ss_dssp -CBCCCHHHHHHHHTTC-CCEECCCSEEETT------EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTSCBCBC
T ss_pred cCcccChhHHHHHhcCc-eEEecCcceEeCC------eeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCCCcccc
Confidence 4454 5556667777632 5788999999999999999999999999999999667889999
Q ss_pred CC--CCCCCCcEEEec--cccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 337 GQ--FRTRMPGIFAIG--DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 337 ~~--~~t~~~~iya~G--D~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
++ ++|+.|+|||+| ||+..... .+..|..+|+.+|.+|..
T Consensus 306 ~~~l~~t~~~~vya~Gd~d~~~~~~~---------~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 306 GSGLRALAVPSVWLLGYGDWNGMASA---------TLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp TTSCBBSSCTTEEECSSCGGGSTTCS---------STTTHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCCeEEeccccccccchh---------hhhhhHHHHHHHHHHHHH
Confidence 99 899999999999 56652211 223477888888888864
No 77
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=8.1e-34 Score=282.40 Aligned_cols=307 Identities=19% Similarity=0.229 Sum_probs=206.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC------CCCCC----CCCCC-ccccCCCCC--CCCCCCCCc--
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA------YAPYE----RPALT-KGYLFPLDK--KPARLPGFH-- 124 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~------~~~~~----~~~l~-~~~l~~~~~--~~~~~~~~~-- 124 (497)
++||+|||||+||+++|..|++.|+ . +|+|||+++ ..+.. .+... ..+-..... .....+.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~-~-~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGI-T-DVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-C-CEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCC-C-cEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 4799999999999999999999986 2 799999986 11100 00000 000000000 000000000
Q ss_pred --cccCCCCCCCCHhHHHHcCcEEEeCCcEEEEecCC--CEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEe
Q 010917 125 --TCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYI 200 (497)
Q Consensus 125 --~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~ 200 (497)
..........+..++++.+++++.+++|+.++.+. ..|.+.++ .+.||+||+|||+.+. |.+|+ ..+.+.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~--p~ip~---~~~~~~ 155 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF--PKKPF---KYGIHY 155 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS--BCCCS---SSCEEG
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc--cCCCC---Cceech
Confidence 00000000112334566899999999999998763 46777766 5899999999999864 33343 122222
Q ss_pred cCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh------ccCHHHHHHHHHHHHHCC-c
Q 010917 201 RDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSLAQRYEQLYQQNG-V 273 (497)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------~~~~~~~~~~~~~l~~~G-V 273 (497)
..+.+.. ..++++|+|||+|.+|+|+|..|.+.|.+|+++++.+.+++. .+++...+.+.+.+++.| |
T Consensus 156 ~~~~~~~-----~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v 230 (369)
T 3d1c_A 156 SEIEDFD-----NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARI 230 (369)
T ss_dssp GGCSCGG-----GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCE
T ss_pred hhcCChh-----hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcE
Confidence 2111111 125689999999999999999999999999999999877642 145677888899999997 9
Q ss_pred EEEcCCeEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEeccCcCCCcchhhcCCcccCCCEEecCC-CCCCCCcEEEecc
Q 010917 274 KFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FRTRMPGIFAIGD 351 (497)
Q Consensus 274 ~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~-~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~-~~t~~~~iya~GD 351 (497)
+++++++|.+++..+ +. ..+.+.+|+++. +|.||+|+|++|+.+++.+.+++.++|++.||++ ++|+.|+|||+||
T Consensus 231 ~~~~~~~v~~i~~~~-~~-~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD 308 (369)
T 3d1c_A 231 EMNVHYTVKDIDFNN-GQ-YHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGA 308 (369)
T ss_dssp EEECSCCEEEEEEET-TE-EEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEECST
T ss_pred EEecCcEEEEEEecC-Cc-eEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEecc
Confidence 999999999996432 22 357788887765 6999999999999877766556544677999985 6789999999999
Q ss_pred ccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 010917 352 VAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 387 (497)
Q Consensus 352 ~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~ 387 (497)
|+..+....+ .+..+.+||+.+|++|.+..
T Consensus 309 ~~~~~~~~~~------~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 309 TVENDNAKLC------YIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp TCCCSSCCCC------SHHHHGGGHHHHHHHHHHHT
T ss_pred ccccCCeeEE------EEehhhHHHHHHHHHHhccc
Confidence 9987654322 34557888999999998643
No 78
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=5.1e-34 Score=289.46 Aligned_cols=298 Identities=19% Similarity=0.190 Sum_probs=210.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
++||||||||+||+++|..|++.+. ..+|||||+++.+.|. +.+.. +... .....++ ...+.+++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~~~~~~ 66 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLL 66 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcC-CCcch-hccC-ccCHHHH-----------HHHHHHHH
Confidence 4799999999999999999999432 3399999999876653 22111 1100 0111111 12344566
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCc-EEEecCHHHHHHHHHh---hcc
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG-VHYIRDVADADALISS---LEK 215 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~g-v~~~~~~~~~~~~~~~---~~~ 215 (497)
++.+++++. .+|+.++++.+.+.+++++++.||+||+|||+.+. .| +....+ ...+.+..+...+.+. +..
T Consensus 67 ~~~gv~~~~-~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~-~p---g~~~~g~~~~~~~~~~a~~~~~~~~~~~~ 141 (430)
T 3h28_A 67 PKFNIEFIN-EKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FG---AEGQEENSTSICTAEHALETQKKLQELYA 141 (430)
T ss_dssp GGGTEEEEC-SCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CC---SBTHHHHSCCCSSHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEE-EEEEEEECCCCEEEECCCcEEECCEEEEcCCcccc-cC---CCCCcCCccCcCCHHHHHHHHHHHHHHHh
Confidence 778999987 59999999999999999989999999999999865 33 211111 2234455555544432 223
Q ss_pred CCeEEEEcCCHHH------HHHH----HHHHhCC----CcEEEEecCCcchhhc--cCHHHHHHHHHHHHHCCcEEEcCC
Q 010917 216 AKKVVVVGGGYIG------MEVA----AAAVGWK----LDTTIIFPENHLLQRL--FTPSLAQRYEQLYQQNGVKFVKGA 279 (497)
Q Consensus 216 ~~~vvVvG~G~~g------~e~A----~~l~~~g----~~Vtlv~~~~~~~~~~--~~~~~~~~~~~~l~~~GV~i~~~~ 279 (497)
+++++|||+|..+ +|+| ..+.+.| .+|+++++.+.+.... ..+.....+.+.++++||++++++
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~ 221 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANV 221 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSC
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCC
Confidence 5567888887543 7777 4555677 4799999988763210 123477888899999999999999
Q ss_pred eEEEEEeCCCCcEEEEEeCC----CcEEEcCEEEEeccCcCCCcchhh--cCCcccCC-CEEecCCCCC-CCCcEEEecc
Q 010917 280 SIKNLEAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSPFER--VGLNSSVG-GIQVDGQFRT-RMPGIFAIGD 351 (497)
Q Consensus 280 ~v~~i~~~~~~~v~~v~~~~----g~~i~~D~vv~a~G~~p~~~~~~~--~gl~~~~g-~i~vd~~~~t-~~~~iya~GD 351 (497)
+|++++.+ .+++++ ++++++|.|++++|++|+ .++.+ .++..++| +|.||+++|| ++|||||+||
T Consensus 222 ~v~~v~~~------~v~~~~~~~~g~~i~~D~vv~a~G~~~~-~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD 294 (430)
T 3h28_A 222 AVKAIEPD------KVIYEDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGV 294 (430)
T ss_dssp EEEEECSS------EEEEECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECST
T ss_pred EEEEEeCC------eEEEEecCCCceEEeeeEEEECCCCccc-hhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEe
Confidence 99999742 244444 678999999999999987 45555 47755678 8999999999 9999999999
Q ss_pred ccccCCccCCcc---cccccHHHHHHHHHHHHHHHhc
Q 010917 352 VAAFPLKMYDRT---ARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 352 ~~~~~~~~~g~~---~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
|+..+... +.. ....+...|..||+.+|+||..
T Consensus 295 ~~~~~~~~-~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 295 VTAIPPIE-KTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TBCCCCSS-CCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeccCCcc-CCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99876421 110 0123567799999999999975
No 79
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=4.4e-34 Score=306.94 Aligned_cols=318 Identities=15% Similarity=0.146 Sum_probs=213.2
Q ss_pred CCCchhhhccccc---ccccccCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCC
Q 010917 38 HSSAKNFQRRGFV---VAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLD 114 (497)
Q Consensus 38 ~~~~~~~~~~~~~---~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~ 114 (497)
|.+|+........ +...++...+++|+||||||||++||..|+++|+ +|+|||+++..... +...
T Consensus 364 C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~---~Vtlie~~~~~GG~--------~~~~- 431 (729)
T 1o94_A 364 CTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGY---TVHLTDTAEKIGGH--------LNQV- 431 (729)
T ss_dssp CSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSTTTT--------HHHH-
T ss_pred eccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCe--------eeec-
Confidence 8888766543211 1122234567899999999999999999999998 89999998764211 0000
Q ss_pred CCCCCCCCCccccCCCCCCCCHhHHHHc------CcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCC----
Q 010917 115 KKPARLPGFHTCVGSGGERQTPEWYKEK------GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS---- 184 (497)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~---- 184 (497)
..+|+...+.. ...+....++.. ++++..+ +.++++++..+.||+||||||+.++
T Consensus 432 ---~~~pg~~~~~~--~~~~~~~~i~~~~~~~~~~v~i~~~----------~~v~~~~~~~~~~d~vviAtG~~~~~~~~ 496 (729)
T 1o94_A 432 ---AALPGLGEWSY--HRDYRETQITKLLKKNKESQLALGQ----------KPMTADDVLQYGADKVIIATGARWNTDGT 496 (729)
T ss_dssp ---TTSTTCGGGHH--HHHHHHHHHHHHHHHSTTCEEECSC----------CCCCHHHHHTSCCSEEEECCCEEECSSCC
T ss_pred ---ccCCChHHHHH--HHHHHHHHHHHhhcccCCceEEEeC----------eEEehhhccccCCCEEEEcCCCCcccccc
Confidence 01111110000 000111112221 3333322 2344444556889999999999843
Q ss_pred ---cCCCCCCCC--CCcEEEecCHHHHHHHHHhhccCCeEEEEc--CCHHHHHHHHHHHhCCCcEEEEecCCcchhh-cc
Q 010917 185 ---RFPEKIGGY--LPGVHYIRDVADADALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-LF 256 (497)
Q Consensus 185 ---~~~~~~g~~--~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG--~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-~~ 256 (497)
..+.++|.+ .+++.+.. +. +......+++|+||| +|++|+|+|..|+++|.+||++++.+ +++. .+
T Consensus 497 ~~p~~~~ipG~~~~~~~v~~~~---~~--l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~ 570 (729)
T 1o94_A 497 NCLTHDPIPGADASLPDQLTPE---QV--MDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHF 570 (729)
T ss_dssp CTTTSSCCTTCCTTSTTEECHH---HH--HHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHH
T ss_pred cCccCCCCCCccccCCCEEEHH---HH--hcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccc
Confidence 234556654 45555432 21 222344678999999 99999999999999999999999998 6553 13
Q ss_pred CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCC-cE------------------EEcCEEEEeccCcCC
Q 010917 257 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-ST------------------IDADTIVIGIGAKPT 317 (497)
Q Consensus 257 ~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g-~~------------------i~~D~vv~a~G~~p~ 317 (497)
+.. ...+.+.++++||++++++++++++. ++........++ ++ +++|.||+|+|.+|+
T Consensus 571 ~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 571 TLE-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp TTC-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred ccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 333 45677888999999999999999973 221111111233 33 999999999999999
Q ss_pred CcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 010917 318 VSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYF 397 (497)
Q Consensus 318 ~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~~~~~~~~p~~ 397 (497)
++++++++. .+|++++|+.|+|||+|||+... .+..|..+|+.+|.+|.+. ..+..+||
T Consensus 648 ~~l~~~l~~-------~vd~~~~t~~~~VyAiGD~~~~~-----------~~~~A~~~G~~aA~~i~~~--l~~~~~p~- 706 (729)
T 1o94_A 648 CTLWNELKA-------RESEWAENDIKGIYLIGDAEAPR-----------LIADATFTGHRVAREIEEA--NPQIAIPY- 706 (729)
T ss_dssp CHHHHHHHH-------TGGGTGGGTCCEEEECGGGTSCC-----------CHHHHHHHHHHHHHTTTSS--CTTSCCCC-
T ss_pred hHHHHHHhh-------hcccccccCCCCeEEEeCccchh-----------hHHHHHHHHHHHHHHhhhh--cccCCCCe-
Confidence 988776531 26889999999999999998731 4567999999999999853 45677898
Q ss_pred eeeccccCCCCcceeeEEeecC
Q 010917 398 YSRVFEYEGSPRKVWWQFFGDN 419 (497)
Q Consensus 398 ~~~~~~~~g~~~~~~~~~~g~~ 419 (497)
|++++++. +|++|..
T Consensus 707 ~~~~~~~~-------~~~~~~~ 721 (729)
T 1o94_A 707 KRETIAWG-------TPHMPGG 721 (729)
T ss_dssp CCCCCCTT-------CCSSTTC
T ss_pred eeecccCc-------ccccCCC
Confidence 88988764 5666643
No 80
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=1.4e-33 Score=287.07 Aligned_cols=291 Identities=16% Similarity=0.163 Sum_probs=199.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+||||||||++||..|++.|. +.+|+|||+++.. |... ..+ ..+....... ....+.++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~vie~~~~~-gg~~--~~g-~~p~~~~~~~-----------~~~~~~~~ 68 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHS-RAHVDIYEKQLVP-FGLV--RFG-VAPDHPEVKN-----------VINTFTQT 68 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCS-SCEEEEECSSSSS-CTHH--HHT-SCTTCGGGGG-----------HHHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCC-CCCEEEEeCCCcC-Ccee--ecc-cCCCCccHHH-----------HHHHHHHH
Confidence 35799999999999999999999983 4599999998764 3210 000 0010000000 01233456
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHH----HHHh--
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADA----LISS-- 212 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~----~~~~-- 212 (497)
+++.+++++.++.+ .+.+++++. .+.||+||+|||+.+...|.++|.+.+++++.+++..... ....
T Consensus 69 ~~~~gv~~~~~~~v------~~~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~ 141 (460)
T 1cjc_A 69 ARSDRCAFYGNVEV------GRDVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAP 141 (460)
T ss_dssp HTSTTEEEEBSCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCC
T ss_pred HHhCCcEEEeeeEE------eeEEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCcccccccc
Confidence 67789999988665 123444332 3689999999999963456678877788887654422110 0000
Q ss_pred hccCCeEEEEcCCHHHHHHHHHHH--------------------hCCC-cEEEEecCCcch--------------hh---
Q 010917 213 LEKAKKVVVVGGGYIGMEVAAAAV--------------------GWKL-DTTIIFPENHLL--------------QR--- 254 (497)
Q Consensus 213 ~~~~~~vvVvG~G~~g~e~A~~l~--------------------~~g~-~Vtlv~~~~~~~--------------~~--- 254 (497)
...+++|+|||+|++|+|+|..|+ +.+. +|++++|.+.+. +.
T Consensus 142 ~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~ 221 (460)
T 1cjc_A 142 DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRP 221 (460)
T ss_dssp CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCcee
Confidence 014789999999999999999999 5677 799999987651 10
Q ss_pred -----cc----------CH---HHHHHHHHHHHH--------------CCcEEEcCCeEEEEEeCCCC-cEEEEEeC---
Q 010917 255 -----LF----------TP---SLAQRYEQLYQQ--------------NGVKFVKGASIKNLEAGSDG-RVAAVKLE--- 298 (497)
Q Consensus 255 -----~~----------~~---~~~~~~~~~l~~--------------~GV~i~~~~~v~~i~~~~~~-~v~~v~~~--- 298 (497)
.+ +. .+.+.+.+.+++ +||++++++.+.+|...+++ ++..+.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~ 301 (460)
T 1cjc_A 222 MLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTR 301 (460)
T ss_dssp ECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEE
T ss_pred EechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEE
Confidence 00 11 023344455555 89999999999999864335 56555543
Q ss_pred ------------CC--cEEEcCEEEEeccCcCCCcchhhcCC-ccc-CCCEEecCCCCCC-CCcEEEeccccccCCccCC
Q 010917 299 ------------DG--STIDADTIVIGIGAKPTVSPFERVGL-NSS-VGGIQVDGQFRTR-MPGIFAIGDVAAFPLKMYD 361 (497)
Q Consensus 299 ------------~g--~~i~~D~vv~a~G~~p~~~~~~~~gl-~~~-~g~i~vd~~~~t~-~~~iya~GD~~~~~~~~~g 361 (497)
+| ++++||.||+++|++|+. + .++ +.+ ++++.+|+++||+ .|+|||+|||+..+..
T Consensus 302 l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~--- 374 (460)
T 1cjc_A 302 LEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTG--- 374 (460)
T ss_dssp EESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTC---
T ss_pred EccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCc---
Confidence 34 579999999999999996 3 566 554 5889999999998 7999999999975432
Q ss_pred cccccccHHHHHHHHHHHHHHHhc
Q 010917 362 RTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 362 ~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|+.+|+.+|.+|++
T Consensus 375 ------~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 375 ------VITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp ------CHHHHHHHHHHHHHHHHH
T ss_pred ------cHHHHHHHHHHHHHHHHH
Confidence 345678888888888864
No 81
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.98 E-value=2.3e-33 Score=300.21 Aligned_cols=295 Identities=17% Similarity=0.115 Sum_probs=205.6
Q ss_pred CCCchhhhccccc---ccccccCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCC
Q 010917 38 HSSAKNFQRRGFV---VAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLD 114 (497)
Q Consensus 38 ~~~~~~~~~~~~~---~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~ 114 (497)
|.+||...++... +...++...++||+|||||+|||+||+.|+++|+ +|+|||+++...... . .....+..
T Consensus 366 C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~---~V~liE~~~~~GG~~-~--~~~~~p~~ 439 (690)
T 3k30_A 366 CTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGY---DVVLAEAGRDLGGRV-T--QESALPGL 439 (690)
T ss_dssp CSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSCTHH-H--HHHTSTTC
T ss_pred CCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCEe-e--eccCCCch
Confidence 7777776554321 1222335567899999999999999999999998 899999987543210 0 00000100
Q ss_pred CCCCCCCCCccccCCCCCCCCHhHHHHc-CcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCc-------C
Q 010917 115 KKPARLPGFHTCVGSGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASR-------F 186 (497)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~-------~ 186 (497)
..... ...+....+.+. +++++++++++ .+++..+.||+||+|||+.++. .
T Consensus 440 ~~~~~-----------~~~~~~~~~~~~~gv~~~~~~~v~----------~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~ 498 (690)
T 3k30_A 440 SAWGR-----------VKEYREAVLAELPNVEIYRESPMT----------GDDIVEFGFEHVITATGATWRTDGVARFHT 498 (690)
T ss_dssp GGGGH-----------HHHHHHHHHHTCTTEEEESSCCCC----------HHHHHHTTCCEEEECCCEEECSSCCSSSCS
T ss_pred hHHHH-----------HHHHHHHHHHHcCCCEEEECCeec----------HHHHhhcCCCEEEEcCCCccccccccccCC
Confidence 00000 012234445565 89998876542 1233457899999999998541 3
Q ss_pred CCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEc--CCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHH
Q 010917 187 PEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 264 (497)
Q Consensus 187 ~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG--~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~ 264 (497)
|.++|.+.+++.+. . +.+......+++|+||| +|++|+|+|..|.+.|.+|+++++.+.+++...++.....+
T Consensus 499 ~~i~G~~~~~v~~~---~--~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l 573 (690)
T 3k30_A 499 TALPIAEGMQVLGP---D--DLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRI 573 (690)
T ss_dssp SCCCBCTTSEEECH---H--HHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHH
T ss_pred CCCCCCCCCcEEcH---H--HHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHH
Confidence 44556544444432 1 12222345678899999 99999999999999999999999999888764456667788
Q ss_pred HHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCC
Q 010917 265 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMP 344 (497)
Q Consensus 265 ~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~ 344 (497)
.+.++++||+++++++|++++.+ +..+..+...+++++++|.||+|+|++|+.++++.++.... +|+.|
T Consensus 574 ~~~l~~~GV~i~~~~~V~~i~~~-~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~~~----------~t~~~ 642 (690)
T 3k30_A 574 QRRLIENGVARVTDHAVVAVGAG-GVTVRDTYASIERELECDAVVMVTARLPREELYLDLVARRD----------AGEIA 642 (690)
T ss_dssp HHHHHHTTCEEEESEEEEEEETT-EEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHHHH----------HTSCS
T ss_pred HHHHHHCCCEEEcCcEEEEEECC-eEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhhhc----------ccCCC
Confidence 89999999999999999999842 11111111235568999999999999999988776532211 78899
Q ss_pred cEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcC
Q 010917 345 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA 386 (497)
Q Consensus 345 ~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~ 386 (497)
+||++|||+..+ .+..|..||+.+|.+|.+.
T Consensus 643 ~VyaiGD~~~~~-----------~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 643 SVRGIGDAWAPG-----------TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp EEEECGGGTSCB-----------CHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEeCCCchh-----------hHHHHHHHHHHHHHHHHhh
Confidence 999999999743 4456999999999999864
No 82
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.98 E-value=1.2e-31 Score=274.03 Aligned_cols=288 Identities=15% Similarity=0.148 Sum_probs=196.3
Q ss_pred CcEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCC----CCC-CC-----------CCccccCCCCCCCCCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAP----YER-PA-----------LTKGYLFPLDKKPARLP 121 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~---~g~~~~~V~lie~~~~~~----~~~-~~-----------l~~~~l~~~~~~~~~~~ 121 (497)
++|+|||||+||++||..|++ .|++..+|+|||+++... |.. +. +..............++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 887212299999986532 110 00 00000000000000011
Q ss_pred CCccc-----------cCCCCCCCCHhHHHHcCcE--EEeCCcEEEEecCCC----EEEECC---C--cEEEeccEEecc
Q 010917 122 GFHTC-----------VGSGGERQTPEWYKEKGIE--MIYQDPVTSIDIEKQ----TLITNS---G--KLLKYGSLIVAT 179 (497)
Q Consensus 122 ~~~~~-----------~~~~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~~----~v~~~~---g--~~i~~d~lvlAt 179 (497)
++... .......++.+++++.+++ ++++++|+.++.... +|++.+ | .++.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 11000 0000011223344566887 888999999987654 676654 4 578999999999
Q ss_pred C--CCCCcCCCCCCCCC-Cc-EEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhc
Q 010917 180 G--CTASRFPEKIGGYL-PG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL 255 (497)
Q Consensus 180 G--~~~~~~~~~~g~~~-~g-v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 255 (497)
| +.|+ .|.++|.+. ++ +.+..++.+.. ...+++|+|||+|.+|+|+|..|++.|.+|+++++.+.+++..
T Consensus 163 G~~s~p~-~p~ipG~~~~~g~~~hs~~~~~~~-----~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~ 236 (464)
T 2xve_A 163 GHFSTPY-VPEFEGFEKFGGRILHAHDFRDAL-----EFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYK 236 (464)
T ss_dssp CSSSSBC-CCCCBTTTTCCSEEEEGGGCCCGG-----GGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCC
T ss_pred CCCCCCc-cCCCCCcccCCceEEehhhhCCHh-----HcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCC
Confidence 9 7776 456666432 33 33322221111 2368999999999999999999999999999999988776532
Q ss_pred cCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhh-cCCcccCC-CE
Q 010917 256 FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER-VGLNSSVG-GI 333 (497)
Q Consensus 256 ~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~-~gl~~~~g-~i 333 (497)
+ ..||+++ ..|++++. + .|.+.||+++++|.||+|+|++|+.+++.+ +++..+++ .+
T Consensus 237 ~-------------~~~V~~~--~~V~~i~~---~---~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v 295 (464)
T 2xve_A 237 W-------------PENWDER--PNLVRVDT---E---NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP 295 (464)
T ss_dssp C-------------CTTEEEC--SCEEEECS---S---EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC
T ss_pred C-------------CCceEEc--CCeEEEeC---C---EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCccc
Confidence 2 2588887 67888862 2 578899999999999999999999998875 67776655 44
Q ss_pred EecCC---CCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 010917 334 QVDGQ---FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 387 (497)
Q Consensus 334 ~vd~~---~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~ 387 (497)
++.+ ++|+.|+||++|||+... .+..|..||+.+|++|.+..
T Consensus 296 -~~~~~~~~~t~~p~i~aiGd~~~~~-----------~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 296 -LNLYKGVVWEDNPKFFYIGMQDQWY-----------SFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp -SSEETTTEESSSTTEEECSCSCCSS-----------CHHHHHHHHHHHHHHHTTSS
T ss_pred -ccccceEecCCCCCEEEEeCccccc-----------chHHHHHHHHHHHHHHcCCC
Confidence 4433 568999999999988632 45678999999999998754
No 83
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=1.3e-32 Score=279.61 Aligned_cols=286 Identities=17% Similarity=0.186 Sum_probs=193.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHH-c------CCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVE-H------GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGE 132 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~-~------g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~ 132 (497)
+++|+||||||||++||..|++ . ++ +|+|||+++.. |... ..+ ..+...... ...
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~---~V~lie~~~~~-gg~~--~~g-v~p~~~~~~-----------~~~ 64 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDM---AVDMLEMLPTP-WGLV--RSG-VAPDHPKIK-----------SIS 64 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE---EEEEEESSSSC-STHH--HHT-SCTTCTGGG-----------GGH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCC---eEEEEecCCCC-CCcc--ccc-cCCCCCCHH-----------HHH
Confidence 4799999999999999999999 7 66 89999998753 3211 000 111110000 011
Q ss_pred CCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHH-H-
Q 010917 133 RQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL-I- 210 (497)
Q Consensus 133 ~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~-~- 210 (497)
..+.+++++.+++++.+..+ .+.|+++++ .+.||+||+|||+.+...+.++|.+.+++++..++.....- .
T Consensus 65 ~~~~~~~~~~~v~~~~~v~v------~~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d 137 (456)
T 1lqt_A 65 KQFEKTAEDPRFRFFGNVVV------GEHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPH 137 (456)
T ss_dssp HHHHHHHTSTTEEEEESCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGG
T ss_pred HHHHHHHhcCCCEEEeeEEE------CCEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcc
Confidence 23445566779999887543 234555544 37899999999997323456778777788765433211000 0
Q ss_pred --Hhh--ccCCeEEEEcCCHHHHHHHHHHHhC--------------------C-CcEEEEecCCcchhhccCH-------
Q 010917 211 --SSL--EKAKKVVVVGGGYIGMEVAAAAVGW--------------------K-LDTTIIFPENHLLQRLFTP------- 258 (497)
Q Consensus 211 --~~~--~~~~~vvVvG~G~~g~e~A~~l~~~--------------------g-~~Vtlv~~~~~~~~~~~~~------- 258 (497)
... ..+++|+|||+|++|+|+|..|++. | .+|+++.+++.+...+..+
T Consensus 138 ~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~ 217 (456)
T 1lqt_A 138 FEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELAD 217 (456)
T ss_dssp GTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGG
T ss_pred cccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhc
Confidence 011 1578999999999999999999974 5 4899999987654321111
Q ss_pred -----------H------------------HHHHHHHHHHH------CCcEEEcCCeEEEEEeCCCCcEEEEEeC-----
Q 010917 259 -----------S------------------LAQRYEQLYQQ------NGVKFVKGASIKNLEAGSDGRVAAVKLE----- 298 (497)
Q Consensus 259 -----------~------------------~~~~~~~~l~~------~GV~i~~~~~v~~i~~~~~~~v~~v~~~----- 298 (497)
+ +.+.+.+.+++ +||++++++.+.++..+ +.+..+.+.
T Consensus 218 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~ 295 (456)
T 1lqt_A 218 LDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELV 295 (456)
T ss_dssp CTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEE
T ss_pred CCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEec
Confidence 1 12344454555 79999999999999843 444334443
Q ss_pred -----------CC--cEEEcCEEEEeccCcCCCcchhhcCCccc-CCCEEecCCCC-CCCCcEEEeccccccCCccCCcc
Q 010917 299 -----------DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFR-TRMPGIFAIGDVAAFPLKMYDRT 363 (497)
Q Consensus 299 -----------~g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~-t~~~~iya~GD~~~~~~~~~g~~ 363 (497)
+| ++++||.||+++|++|+. + .++..+ +|++.+|+++| |+.|+|||+|||+..+..
T Consensus 296 ~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~----- 366 (456)
T 1lqt_A 296 SDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTG----- 366 (456)
T ss_dssp ECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCS-----
T ss_pred CCCcccccccCCCceEEEEcCEEEEccccccCC-C---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCch-----
Confidence 34 469999999999999986 3 345544 57899999999 799999999999975532
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 010917 364 ARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 364 ~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|+.+|..+|.+|++
T Consensus 367 ----~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 367 ----VIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp ----CTTHHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHHHH
Confidence 223477788888888764
No 84
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=2.4e-31 Score=293.14 Aligned_cols=280 Identities=15% Similarity=0.169 Sum_probs=205.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.+|||||||||||++||..|++.|+ +|+|||+++.....-...++.. +++... .++.....+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~---~V~lie~~~~~GG~~~~~~k~~----------i~~~~~---~~~~~~~~~~l 191 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGA---RVMLLDERAEAGGTLLDTAGEQ----------IDGMDS---SAWIEQVTSEL 191 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSSGGGGGSSCCE----------ETTEEH---HHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCCCceeccCCccc----------cCCCCH---HHHHHHHHHHH
Confidence 4789999999999999999999998 8999999876431100000000 000000 00011122334
Q ss_pred HHc-CcEEEeCCcEEEEecCCCEEEE-----------------CCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEec
Q 010917 140 KEK-GIEMIYQDPVTSIDIEKQTLIT-----------------NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIR 201 (497)
Q Consensus 140 ~~~-~v~~~~~~~v~~i~~~~~~v~~-----------------~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~ 201 (497)
.+. +++++.+++|..++.......+ .++..+.||+||||||+.|+. +.++|.+.+++++..
T Consensus 192 ~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~-~~ipG~~~~gv~~~~ 270 (965)
T 2gag_A 192 AEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP-IVFENNDRPGIMLAG 270 (965)
T ss_dssp HHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC-CCCBTCCSTTEEEHH
T ss_pred hhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC-CCCCCCCCCCEEEhH
Confidence 454 8999999899988865432111 112368999999999999874 557888888988764
Q ss_pred CHHHHHHHHHh--hccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCC
Q 010917 202 DVADADALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGA 279 (497)
Q Consensus 202 ~~~~~~~~~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~ 279 (497)
++. .+... ...+++++|||+|++|+|+|..|++.|.+|+++++.+.+++. .+.+++.||++++++
T Consensus 271 ~~~---~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~----------~~~l~~~GV~v~~~~ 337 (965)
T 2gag_A 271 AVR---SYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAA----------AAQAVADGVQVISGS 337 (965)
T ss_dssp HHH---HHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHH----------HHHHHHTTCCEEETE
T ss_pred HHH---HHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchh----------HHHHHhCCeEEEeCC
Confidence 332 22221 235689999999999999999999999999999999876541 456889999999999
Q ss_pred eEEEEEeCCCCcEEEEEeCC-------C--cEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCC-----CCCCc
Q 010917 280 SIKNLEAGSDGRVAAVKLED-------G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR-----TRMPG 345 (497)
Q Consensus 280 ~v~~i~~~~~~~v~~v~~~~-------g--~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~-----t~~~~ 345 (497)
.+++++..+++++..+.+.+ | +++++|.|++++|++|+++++... ++++.+|++++ |+.|+
T Consensus 338 ~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~-----~g~i~vd~~~~~~v~~ts~p~ 412 (965)
T 2gag_A 338 VVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR-----QGKLDWDTTIHAFVPADAVAN 412 (965)
T ss_dssp EEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT-----TCCEEEETTTTEEEECSCCTT
T ss_pred EeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC-----CCcEEEcCcccccccCCCCCC
Confidence 99999853245555666654 5 679999999999999999888765 36899999887 89999
Q ss_pred EEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 346 IFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 346 iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
|||+|||+..+. ...|..+|+.+|.+|++
T Consensus 413 IyAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 413 QHLAGAMTGRLD-----------TASALSTGAATGAAAAT 441 (965)
T ss_dssp EEECGGGGTCCS-----------HHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCchh-----------HHHHHHHHHHHHHHHHH
Confidence 999999998642 23688999999999865
No 85
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.97 E-value=3.5e-31 Score=282.72 Aligned_cols=279 Identities=17% Similarity=0.166 Sum_probs=198.0
Q ss_pred CCCchhhhcccccccccccCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCC
Q 010917 38 HSSAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKP 117 (497)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~ 117 (497)
|.+|+....+...+ ..+...++||+|||||+||++||..|+++|+ +|+|||+++...+.. .+.. ..+...
T Consensus 353 C~~np~~~~e~~~~--~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~---~V~lie~~~~~gg~~-~~~~--~~~~~~-- 422 (671)
T 1ps9_A 353 CLVNPRACHETKMP--ILPAVQKKNLAVVGAGPAGLAFAINAAARGH---QVTLFDAHSEIGGQF-NIAK--QIPGKE-- 422 (671)
T ss_dssp CSSCTTTTCTTTSC--CCSCSSCCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSCTTH-HHHT--TSTTCT--
T ss_pred EEeCcccccccccC--CCCCCCCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCCee-eccc--cCCCHH--
Confidence 88887765432211 2234557899999999999999999999988 899999987654321 0000 001000
Q ss_pred CCCCCCccccCCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEE-EeccEEeccCCCCCcCCCCCCCCCCc
Q 010917 118 ARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLL-KYGSLIVATGCTASRFPEKIGGYLPG 196 (497)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i-~~d~lvlAtG~~~~~~~~~~g~~~~g 196 (497)
.+ .. ....+..++++.++++++++.|.. . .+ .||+||||||+.|. .|.++|.+.++
T Consensus 423 -~~---~~-----~~~~~~~~~~~~gv~~~~~~~v~~---~----------~~~~~d~lviAtG~~p~-~~~i~G~~~~~ 479 (671)
T 1ps9_A 423 -EF---YE-----TLRYYRRMIEVTGVTLKLNHTVTA---D----------QLQAFDETILASGIVPR-TPPIDGIDHPK 479 (671)
T ss_dssp -TH---HH-----HHHHHHHHHHHHTCEEEESCCCCS---S----------SSCCSSEEEECCCEEEC-CCCCBTTTSTT
T ss_pred -HH---HH-----HHHHHHHHHHHcCCEEEeCcEecH---H----------HhhcCCEEEEccCCCcC-CCCCCCCCCCc
Confidence 00 00 011234556778999999876532 1 14 89999999999887 45567765566
Q ss_pred EEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCC------------------------------------
Q 010917 197 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKL------------------------------------ 240 (497)
Q Consensus 197 v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~------------------------------------ 240 (497)
+.+.. +.+......+++|+|||+|++|+|+|..|++.|.
T Consensus 480 v~~~~-----~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 554 (671)
T 1ps9_A 480 VLSYL-----DVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSP 554 (671)
T ss_dssp EEEHH-----HHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCS
T ss_pred EeeHH-----HHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCC
Confidence 66532 2222223468999999999999999999998874
Q ss_pred -cEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEeccCcCC
Q 010917 241 -DTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPT 317 (497)
Q Consensus 241 -~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~~D~vv~a~G~~p~ 317 (497)
+|+++++.+..+...+++.....+.+.|++.||++++++++++++. ++ + .+. .+| +++++|.||+|+|++||
T Consensus 555 ~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 555 RQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG-L-HVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp SEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEET--TE-E-EEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred cEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeEEEEeCCEEEECCCcccc
Confidence 4567777666665556777778888999999999999999999973 22 2 222 567 57999999999999999
Q ss_pred CcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHH
Q 010917 318 VSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 383 (497)
Q Consensus 318 ~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i 383 (497)
+++++.+. ...++||++|||+..... .+..|+.||..+|.+|
T Consensus 630 ~~l~~~l~---------------~~g~~v~aiGD~~~~~~~---------~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 630 RALAQPLI---------------DSGKTVHLIGGCDVAMEL---------DARRAIAQGTRLALEI 671 (671)
T ss_dssp CTTHHHHH---------------TTTCCEEECGGGTCCSSC---------CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---------------hcCCCEEEECCcCccCch---------hHHHHHHHHHHHHHhC
Confidence 98877541 123689999999986431 4677999999999875
No 86
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=1.5e-31 Score=275.42 Aligned_cols=253 Identities=16% Similarity=0.165 Sum_probs=190.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
++||+|||||+||++||.+|++. + +|+|||+++...+.....+.... . +++ . ......++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~---~V~vie~~~~~GG~~~~~~~~~~-g-------~~~----~----~~~~~~~l 167 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-L---TVALIEERGWLGGDMWLKGIKQE-G-------FNK----D----SRKVVEEL 167 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-C---CEEEECTTSSSSCSGGGTCSEET-T-------TTE----E----HHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-C---CEEEEeCCCCCCCeeeccccccC-C-------CCC----C----HHHHHHHH
Confidence 46899999999999999999998 6 89999999876554322111100 0 000 0 00111122
Q ss_pred H---HcCcEEEeCCcEEEEecCCCEEEE---CCCc--EEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHH
Q 010917 140 K---EKGIEMIYQDPVTSIDIEKQTLIT---NSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALIS 211 (497)
Q Consensus 140 ~---~~~v~~~~~~~v~~i~~~~~~v~~---~~g~--~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~ 211 (497)
. +.+++++++++|..++.+.+.+.. ++++ .+.||+||+|||+.++ .+.++|.+.+++++.. +...+.+
T Consensus 168 ~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~-~~~~~g~~~~gv~~~~---~~~~~~~ 243 (493)
T 1y56_A 168 VGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS-TMLFENNDMPGVFRRD---FALEVMN 243 (493)
T ss_dssp HHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC-CCCCTTTTSTTEEEHH---HHHHHHH
T ss_pred HHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc-CCCCCCCCCCCEEEcH---HHHHHHH
Confidence 1 458999988888888876653322 4454 6899999999999987 4556787788887653 3333433
Q ss_pred h--hccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCC
Q 010917 212 S--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 289 (497)
Q Consensus 212 ~--~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~ 289 (497)
. ..++++++|+|+|++|+| +.++++||++++++.|.+++.+
T Consensus 244 ~~~~~~~~~vvViGgG~~gle-----------------------------------~~l~~~GV~v~~~~~v~~i~~~-- 286 (493)
T 1y56_A 244 VWEVAPGRKVAVTGSKADEVI-----------------------------------QELERWGIDYVHIPNVKRVEGN-- 286 (493)
T ss_dssp TSCBCSCSEEEEESTTHHHHH-----------------------------------HHHHHHTCEEEECSSEEEEECS--
T ss_pred hcccCCCCEEEEECCCHHHHH-----------------------------------HHHHhCCcEEEeCCeeEEEecC--
Confidence 2 235689999999999988 4467889999999999999843
Q ss_pred CcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcc---cCCCEE-ecCCCCCCCCcEEEeccccccCCccCCcccc
Q 010917 290 GRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNS---SVGGIQ-VDGQFRTRMPGIFAIGDVAAFPLKMYDRTAR 365 (497)
Q Consensus 290 ~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~---~~g~i~-vd~~~~t~~~~iya~GD~~~~~~~~~g~~~~ 365 (497)
+.+..+.+.+|+++++|.||+++|++|+.++++.++++. ++|++. ||++++ +.|+|||+|||+..+
T Consensus 287 ~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~~--------- 356 (493)
T 1y56_A 287 EKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSIK--------- 356 (493)
T ss_dssp SSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCCC---------
T ss_pred CceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCcc---------
Confidence 345567788999999999999999999999999998865 256676 899999 999999999999753
Q ss_pred cccHHHHHHHHHHHHHHHhc
Q 010917 366 VEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 366 ~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|..+|+.+|.+|.+
T Consensus 357 --~~~~A~~~g~~aa~~i~~ 374 (493)
T 1y56_A 357 --PHYANYLEGKLVGAYILK 374 (493)
T ss_dssp --CHHHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHH
Confidence 456689999999999975
No 87
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=7.5e-31 Score=269.04 Aligned_cols=314 Identities=14% Similarity=0.098 Sum_probs=192.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCC---CcEEEEcCCCCCCCCCCCCCccccCC--C------CCCCCCCCCCc---
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMAD---GRLCIVSKEAYAPYERPALTKGYLFP--L------DKKPARLPGFH--- 124 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~---~~V~lie~~~~~~~~~~~l~~~~l~~--~------~~~~~~~~~~~--- 124 (497)
..+||+|||||+||+++|..|++.|. . .+|+|||+++...|....+..+.... . ...+.....+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~-~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQ-AQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHH-HHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhccc-ccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 34699999999999999999999982 1 28999999987765432221110000 0 00000000000
Q ss_pred ----------cccC-----CCCCCCCHhHHHHcCcEEEeCCcEEEEecC---CC----EEEECCCc----EEEeccEEec
Q 010917 125 ----------TCVG-----SGGERQTPEWYKEKGIEMIYQDPVTSIDIE---KQ----TLITNSGK----LLKYGSLIVA 178 (497)
Q Consensus 125 ----------~~~~-----~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~---~~----~v~~~~g~----~i~~d~lvlA 178 (497)
.... ..+..++....++.+++++++++|+.++.. .+ +|.+.++. ++.||+||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 0000 000001112223457899999999999875 43 56666665 7999999999
Q ss_pred cCCCCCcCCC-CCCCCCC-cEEEecCHHH-HHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcchh
Q 010917 179 TGCTASRFPE-KIGGYLP-GVHYIRDVAD-ADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQ 253 (497)
Q Consensus 179 tG~~~~~~~~-~~g~~~~-gv~~~~~~~~-~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~ 253 (497)
||+.|. .|. ..+.... .+.+...+.+ .+.+......+++|+|||+|.+|+|+|..|.+. +.+|+++++.+.+++
T Consensus 188 tG~~p~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p 266 (463)
T 3s5w_A 188 PGGTPR-IPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP 266 (463)
T ss_dssp CCCEEC-CCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB
T ss_pred CCCCCC-CcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC
Confidence 999776 343 2221111 3333322221 112211122589999999999999999999999 899999999987643
Q ss_pred h--------c-----------cCHHHHHHHHHHHHH--------------------------CCcEEEcCCeEEEEEeCC
Q 010917 254 R--------L-----------FTPSLAQRYEQLYQQ--------------------------NGVKFVKGASIKNLEAGS 288 (497)
Q Consensus 254 ~--------~-----------~~~~~~~~~~~~l~~--------------------------~GV~i~~~~~v~~i~~~~ 288 (497)
. . +++.....+.+.+.. .||++++++.|++++..+
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~ 346 (463)
T 3s5w_A 267 ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA 346 (463)
T ss_dssp CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET
T ss_pred ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC
Confidence 1 1 222222222222222 699999999999998653
Q ss_pred CCcEEEEEeC---CCc--EEEcCEEEEeccCcCC--CcchhhcCCcccCCCEEecCCCCCC-----CCcEEEeccccccC
Q 010917 289 DGRVAAVKLE---DGS--TIDADTIVIGIGAKPT--VSPFERVGLNSSVGGIQVDGQFRTR-----MPGIFAIGDVAAFP 356 (497)
Q Consensus 289 ~~~v~~v~~~---~g~--~i~~D~vv~a~G~~p~--~~~~~~~gl~~~~g~i~vd~~~~t~-----~~~iya~GD~~~~~ 356 (497)
++ ..+.+. +|+ ++++|.||+|+|++|+ .+++..+.... |++.||+++++. .|+|||+|||....
T Consensus 347 ~~--~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~--g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~ 422 (463)
T 3s5w_A 347 QG--IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL--GDHEIGRDYRLQTDERCKVAIYAQGFSQASH 422 (463)
T ss_dssp TE--EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB--C--CCCTTSBCCBCTTBCSEEEESSCCHHHH
T ss_pred CE--EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh--CCcccCcccccccCCCCCCeEEEcCCCcccC
Confidence 33 245554 665 4999999999999999 66777654433 789999999874 46799999998643
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHH
Q 010917 357 LKMYDRTARVEHVDHARQSAQHCIKAL 383 (497)
Q Consensus 357 ~~~~g~~~~~~~~~~A~~~g~~~a~~i 383 (497)
..... . .-..|.+++..++..+
T Consensus 423 g~~~~-~----l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 423 GLSDT-L----LSVLPVRAEEISGSLY 444 (463)
T ss_dssp CTTTT-S----STTHHHHHHHHHHHHH
T ss_pred CcCcc-c----hhHHHHHHHHHHHHHH
Confidence 22111 1 1123666666554443
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.96 E-value=3.7e-29 Score=255.01 Aligned_cols=288 Identities=11% Similarity=0.080 Sum_probs=189.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC----CCCC-C----CCcc---c----cCC-------CCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP----YERP-A----LTKG---Y----LFP-------LDK 115 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~----~~~~-~----l~~~---~----l~~-------~~~ 115 (497)
+.++|+|||||+||+++|..|++.|+ ..+|+|||+.+... |... . ++.. . +.. ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 45899999999999999999999986 45799999986431 2110 0 0000 0 000 000
Q ss_pred CCC-----------CCCCCccccCC-------CCCCCCHhHHHHcCcEEEeCCcEEEEecCCC--EEEECC---Cc---E
Q 010917 116 KPA-----------RLPGFHTCVGS-------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNS---GK---L 169 (497)
Q Consensus 116 ~~~-----------~~~~~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~---g~---~ 169 (497)
... .+.++...... ....++.++.++.+..++++++|+.++.... +|++.+ |+ +
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISK 163 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEE
T ss_pred hhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEE
Confidence 000 00000000000 0001112233344677888999999987654 566654 65 7
Q ss_pred EEeccEEeccCC--CCCcCCCCCCCCC-----Cc-EEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCc
Q 010917 170 LKYGSLIVATGC--TASRFPEKIGGYL-----PG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLD 241 (497)
Q Consensus 170 i~~d~lvlAtG~--~~~~~~~~~g~~~-----~g-v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~ 241 (497)
+.||+||+|||. .|. .|.++|.+. ++ +.+..++.+.. ...+++|+|||+|++|+|+|..|++.+.+
T Consensus 164 ~~~d~VVvAtG~~s~p~-~p~i~G~~~~~~~~~g~v~~~~~~~~~~-----~~~~k~VvVvG~G~sg~e~A~~l~~~~~~ 237 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPY-IPNIKGLDEYAKAVPGSVLHSSLFREPE-----LFVGESVLVVGGASSANDLVRHLTPVAKH 237 (447)
T ss_dssp EEESEEEECCCSSSSBC-BCCCBTHHHHHHHSTTSEEEGGGCCCGG-----GGTTCCEEEECSSHHHHHHHHHHTTTSCS
T ss_pred EEeCEEEECCCCCCCCC-CCCCCChhhhhccCCccEEEecccCChh-----hcCCCEEEEEccCcCHHHHHHHHHHHhCC
Confidence 999999999998 554 455555321 22 44433222221 12589999999999999999999999999
Q ss_pred -EEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcE-EEcCEEEEeccCcCCCc
Q 010917 242 -TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTVS 319 (497)
Q Consensus 242 -Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~-i~~D~vv~a~G~~p~~~ 319 (497)
|+++++.+.+ +++.||++ +..|++++.. ++ .|++.||++ +++|.||+|+|++|+.+
T Consensus 238 ~V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~~~-~~---~v~~~dG~~~~~~D~vi~atG~~~~~~ 295 (447)
T 2gv8_A 238 PIYQSLLGGGD----------------IQNESLQQ--VPEITKFDPT-TR---EIYLKGGKVLSNIDRVIYCTGYLYSVP 295 (447)
T ss_dssp SEEEECTTCCS----------------CBCSSEEE--ECCEEEEETT-TT---EEEETTTEEECCCSEEEECCCBCCCCC
T ss_pred cEEEEeCCCCc----------------CCCCCeEE--ecCeEEEecC-CC---EEEECCCCEeccCCEEEECCCCCcCCC
Confidence 9999998755 34567875 4678888632 22 578889986 79999999999999999
Q ss_pred c-----hhhc--CCcccCCCEEecCCCC---CCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 010917 320 P-----FERV--GLNSSVGGIQVDGQFR---TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 387 (497)
Q Consensus 320 ~-----~~~~--gl~~~~g~i~vd~~~~---t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~~~ 387 (497)
+ ++++ ++.. ++.+.++.+.+ ++.|+||++||+.... .+..|..||+.+|++|.+..
T Consensus 296 ~l~~~~l~~~~~~i~~-~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-----------~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 296 FPSLAKLKSPETKLID-DGSHVHNVYQHIFYIPDPTLAFVGLALHVV-----------PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp CHHHHSCCSTTTCCCS-SSSSCCSEETTTEETTCTTEEESSCCBSSC-----------HHHHHHHHHHHHHHHHTTSS
T ss_pred CCcccccccccCceec-CCCcccccccccccCCCCcEEEEecccccc-----------CchHHHHHHHHHHHHHcCCC
Confidence 8 6654 2322 24455555555 6899999999997642 45678999999999998643
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=7.6e-28 Score=249.41 Aligned_cols=298 Identities=17% Similarity=0.224 Sum_probs=190.3
Q ss_pred CCcEEEEcCchHHHHHHHHHH-HcCCCCCcEEEEcCCCCCCC-----CCCCC----C-ccccCCCCCC---CCCCCCCcc
Q 010917 60 NREFVIVGGGNAAGYAARTFV-EHGMADGRLCIVSKEAYAPY-----ERPAL----T-KGYLFPLDKK---PARLPGFHT 125 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~-~~g~~~~~V~lie~~~~~~~-----~~~~l----~-~~~l~~~~~~---~~~~~~~~~ 125 (497)
.+||+|||||+||+++|..|+ +.|+ +|+|||+++...- ..|.. . ..+.+..... ...+... .
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~---~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~-~ 83 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGL---TTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTT-Y 83 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---CEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBS-E
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCC---CEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCccc-C
Confidence 479999999999999999999 8887 8999999764320 01111 0 0000000000 0000000 0
Q ss_pred ccCCCCCCCCHhHHHHcCc--EEEeCCcEEEEecCCC----EEEECCCcEEEeccEEeccC--CCCCcCCCCCCCC-CCc
Q 010917 126 CVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LPG 196 (497)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~g~~i~~d~lvlAtG--~~~~~~~~~~g~~-~~g 196 (497)
....+...++....++.++ +++++++|++++.+.. +|++++|+++.||+||+||| +.|. .|.++|.+ ..+
T Consensus 84 ~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~g 162 (540)
T 3gwf_A 84 ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN-FPNLPGLDTFEG 162 (540)
T ss_dssp EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC-CCCCTTGGGCCS
T ss_pred CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC-CCCCCCccccCC
Confidence 0000111223444566787 7899999999987665 78889999999999999999 5665 46566643 223
Q ss_pred E-EEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc-hhh---ccCHHHHHHHH------
Q 010917 197 V-HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-LQR---LFTPSLAQRYE------ 265 (497)
Q Consensus 197 v-~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~---~~~~~~~~~~~------ 265 (497)
. .+.....+ .....+|+|+|||+|.+|+|+|..|++.+.+||+++|.+.+ ++. .+++...+.++
T Consensus 163 ~~~~~~~~~~-----~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~ 237 (540)
T 3gwf_A 163 ETIHTAAWPE-----GKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRI 237 (540)
T ss_dssp EEEEGGGCCS-----SCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHH
T ss_pred CEEEeecCCC-----ccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHH
Confidence 2 11111111 12246899999999999999999999999999999999873 221 01121111111
Q ss_pred -------------------------------------------------------------------HH-----------
Q 010917 266 -------------------------------------------------------------------QL----------- 267 (497)
Q Consensus 266 -------------------------------------------------------------------~~----------- 267 (497)
+.
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~ 317 (540)
T 3gwf_A 238 WERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETA 317 (540)
T ss_dssp HHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHH
T ss_pred HHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11
Q ss_pred ----------------------HHHCCcEEEc--CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhh
Q 010917 268 ----------------------YQQNGVKFVK--GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER 323 (497)
Q Consensus 268 ----------------------l~~~GV~i~~--~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~ 323 (497)
+.+.+|+++. ...|++|+++ +|.+.||+++++|.||+|||+++++.++..
T Consensus 318 ~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~------gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~ 391 (540)
T 3gwf_A 318 RKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK------GVVTEDGVLHELDVLVFATGFDAVDGNYRR 391 (540)
T ss_dssp HHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS------EEEETTCCEEECSEEEECCCBSCSSHHHHT
T ss_pred HhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC------eEEcCCCCEEECCEEEECCccCccccCcCc
Confidence 1145889885 6789999753 688999999999999999999998766665
Q ss_pred cCCcccCCCEEecC--------C--CCC-CCCcEEEe-ccccccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 010917 324 VGLNSSVGGIQVDG--------Q--FRT-RMPGIFAI-GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 384 (497)
Q Consensus 324 ~gl~~~~g~i~vd~--------~--~~t-~~~~iya~-GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~ 384 (497)
.++... +++.+++ + +.+ +.||+|.+ |..+...+ ....+..|++++++.|.
T Consensus 392 ~~i~g~-~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s----------~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 392 IEIRGR-DGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTN----------LPPSIETQVEWISDTIG 453 (540)
T ss_dssp SEEECG-GGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSC----------HHHHHHHHHHHHHHHHH
T ss_pred ceEECC-CCcCHHHhhccChhhccccccCCCCceEEEecCCCCCcc----------HHHHHHHHHHHHHHHHH
Confidence 544332 3444432 2 222 78999999 77654111 23446677888877663
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=2.1e-26 Score=238.86 Aligned_cols=303 Identities=16% Similarity=0.212 Sum_probs=184.1
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCCC----Cc---cccCCCC-----CCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-----ERPAL----TK---GYLFPLD-----KKPARL 120 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-----~~~~l----~~---~~l~~~~-----~~~~~~ 120 (497)
+..+||||||||+||+++|..|++.|+ +|+|||+++...- ..|.. .. .+.+... .....+
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~---~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~ 83 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGM---KVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENF 83 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccC
Confidence 345799999999999999999999887 8999999864320 00100 00 0000000 000000
Q ss_pred CCCccccCCCCCCCCHhHHHHcCc--EEEeCCcEEEEecCCC----EEEECCCcEEEeccEEeccC--CCCCcCCCCCCC
Q 010917 121 PGFHTCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGG 192 (497)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~g~~i~~d~lvlAtG--~~~~~~~~~~g~ 192 (497)
+. ..+...++....++.++ .++++++|+.++.+.. .|++++|+++.||+||+||| +.|. .|.++|.
T Consensus 84 ~~-----~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~-~p~ipG~ 157 (545)
T 3uox_A 84 AS-----QPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR-MPDIKGI 157 (545)
T ss_dssp CB-----HHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCTTG
T ss_pred CC-----HHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc-CCCCCCc
Confidence 00 00011223344556676 7888999999987655 88899999999999999999 6765 4556664
Q ss_pred C-CCc--EEEecCHHHHHHHH-HhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc-hhhc---cCHHHHHH-
Q 010917 193 Y-LPG--VHYIRDVADADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-LQRL---FTPSLAQR- 263 (497)
Q Consensus 193 ~-~~g--v~~~~~~~~~~~~~-~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~---~~~~~~~~- 263 (497)
+ ..+ ++..+...+..... .....+|+|+|||+|.+|+|+|..|++.+.+||+++|.+.+ ++.. +++.....
T Consensus 158 ~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l 237 (545)
T 3uox_A 158 DSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSL 237 (545)
T ss_dssp GGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHH
T ss_pred cccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHH
Confidence 3 223 22211111100000 01236899999999999999999999999999999999874 2210 11111100
Q ss_pred -----------------------------------------------------------------------H--------
Q 010917 264 -----------------------------------------------------------------------Y-------- 264 (497)
Q Consensus 264 -----------------------------------------------------------------------~-------- 264 (497)
+
T Consensus 238 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 317 (545)
T 3uox_A 238 RNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRV 317 (545)
T ss_dssp HHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHc
Confidence 0
Q ss_pred ---------------------------HHHHHHCCcEEEc--CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 265 ---------------------------EQLYQQNGVKFVK--GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 265 ---------------------------~~~l~~~GV~i~~--~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
.+.|.+.+|+++. +..|++|+++ +|.+.+| ++++|.||+|||++
T Consensus 318 ~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~------gv~~~dG-~~~~D~IV~ATGf~ 390 (545)
T 3uox_A 318 KDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPE------GIKTADA-AYDLDVIIYATGFD 390 (545)
T ss_dssp SCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETT------EEEESSC-EEECSEEEECCCCB
T ss_pred CCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccC------eEEeCCC-eeecCEEEECCccc
Confidence 1112234888886 6789999854 6888999 99999999999999
Q ss_pred CCCcchhhcCCcccCCCEEecCC--------CC---CCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 010917 316 PTVSPFERVGLNSSVGGIQVDGQ--------FR---TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 384 (497)
Q Consensus 316 p~~~~~~~~gl~~~~g~i~vd~~--------~~---t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~ 384 (497)
+++.++....+... +|+.+++. +- .+.||+|.+.- |+...+. ......+..|++++++.|.
T Consensus 391 ~~~~~~~~~~i~g~-~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~g----p~~~~~~---~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 391 AVTGSLDRIDIRGK-DNVRLIDAWAEGPSTYLGLQARGFPNFFTLVG----PHNGSTF---CNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp SSSCSCTTSEEECG-GGCBHHHHTTTSCCCBTTTBCTTCTTEEECSS----GGGTGGG---SCHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCceEECC-CCccHHHhhccccceeeccccCCCCcEEEEeC----CCCCCcc---ccHHHHHHHHHHHHHHHHH
Confidence 87666554433322 34444422 11 27899998842 2111111 1123346678888887663
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=2.7e-25 Score=230.75 Aligned_cols=303 Identities=17% Similarity=0.208 Sum_probs=184.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC----C-CCCC----Cc-cccCCCCCC---CCCCCCCc
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY----E-RPAL----TK-GYLFPLDKK---PARLPGFH 124 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~----~-~~~l----~~-~~l~~~~~~---~~~~~~~~ 124 (497)
...+||+|||||+||+++|..|++.|+ +|+|||+++.... . .|.. .. .+.+..... ...+...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~- 94 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGL---TVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEK- 94 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSS-
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccC-
Confidence 345799999999999999999999987 8999999764320 0 0111 00 000000000 0000000
Q ss_pred cccCCCCCCCCHhHHHHcCc--EEEeCCcEEEEecCCC----EEEECCCcEEEeccEEeccC--CCCCcCCCCCCCC-CC
Q 010917 125 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 195 (497)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~g~~i~~d~lvlAtG--~~~~~~~~~~g~~-~~ 195 (497)
...+.+...++...+++.++ +++++++|+.++.+.. +|++++|+++.||+||+||| +.|. .|.++|.+ ..
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 173 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN-TPAFDGLDRFT 173 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC-CCCCTTGGGCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCC
Confidence 00000011223344566787 7889999999987665 88899999999999999999 6766 46666643 22
Q ss_pred cE-EEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHH-------------
Q 010917 196 GV-HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLA------------- 261 (497)
Q Consensus 196 gv-~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~------------- 261 (497)
+. .+..... .+ .....+|+|+|||+|.+|+|+|..|++.+.+||+++|.+.++....++++.
T Consensus 174 g~~~~~~~~~-~~---~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~ 249 (549)
T 4ap3_A 174 GDIVHTARWP-HD---GVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAE 249 (549)
T ss_dssp SEEEEGGGCC-TT---CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHTHHH
T ss_pred CceEEecccc-cc---ccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhccHH
Confidence 32 1111100 00 011368999999999999999999999999999999998741111111110
Q ss_pred --------------------------------------------------------------HHHHHH------------
Q 010917 262 --------------------------------------------------------------QRYEQL------------ 267 (497)
Q Consensus 262 --------------------------------------------------------------~~~~~~------------ 267 (497)
+.+++.
T Consensus 250 ~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~ 329 (549)
T 4ap3_A 250 RRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAE 329 (549)
T ss_dssp HHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred HHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 011111
Q ss_pred -----------------------HHHCCcEEE--cCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchh
Q 010917 268 -----------------------YQQNGVKFV--KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE 322 (497)
Q Consensus 268 -----------------------l~~~GV~i~--~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~ 322 (497)
+.+.+|+++ ....|++|+++ +|.+.+| ++++|.||+|||+++++.++.
T Consensus 330 ~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~------gv~~~dG-~~~~D~iI~ATGf~~~~~~~~ 402 (549)
T 4ap3_A 330 LLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDET------GIVTTGA-HYDLDMIVLATGFDAMTGSLD 402 (549)
T ss_dssp HHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETT------EEEESSC-EEECSEEEECCCEEESSTTGG
T ss_pred hCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCC------cEEeCCC-ceecCEEEECCcccccccccC
Confidence 123378887 24678899853 5888999 999999999999999875666
Q ss_pred hcCCcccCCCEEecCCCC-----------CCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 010917 323 RVGLNSSVGGIQVDGQFR-----------TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 384 (497)
Q Consensus 323 ~~gl~~~~g~i~vd~~~~-----------t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~ 384 (497)
...+... +++.+++.++ .+.||+|.+. .|+...+. ......+..|++++++.|.
T Consensus 403 ~~~i~g~-~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~----Gp~~~~~~---~s~~~~~e~~~~~i~~~i~ 467 (549)
T 4ap3_A 403 KLEIVGR-GGRTLKETWAAGPRTYLGLGIDGFPNFFNLT----GPGSPSVL---ANMVLHSELHVDWVADAIA 467 (549)
T ss_dssp GSEEECG-GGCBHHHHTTTSCCCBTTTBCTTCTTEEETT----CTTSCGGG---SCHHHHHHHHHHHHHHHHH
T ss_pred ceeEECC-CCcCHHHhhccchhhccccccCCCCcEEEEe----CCCCCCcC---ccHHHHHHHHHHHHHHHHH
Confidence 5544322 4555553321 1678888863 11111111 1122346677777777663
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.92 E-value=7.4e-25 Score=228.18 Aligned_cols=300 Identities=16% Similarity=0.223 Sum_probs=183.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCCCC---ccccCCCCCCC-----CCCCCCcc
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-----ERPALT---KGYLFPLDKKP-----ARLPGFHT 125 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-----~~~~l~---~~~l~~~~~~~-----~~~~~~~~ 125 (497)
..+||+|||||++|+++|..|++.|+ +|+|+|+++...- ..|... ....+...-.+ ..+... .
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~-~ 90 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGR---SVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTER-Y 90 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBS-S
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccc-c
Confidence 35799999999999999999999987 8999999865320 001100 00000000000 000000 0
Q ss_pred ccCCCCCCCCHhHHHHcC--cEEEeCCcEEEEecCC----CEEEECCCcEEEeccEEeccCC--CCCcCCCCCCCC-CCc
Q 010917 126 CVGSGGERQTPEWYKEKG--IEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LPG 196 (497)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~--v~~~~~~~v~~i~~~~----~~v~~~~g~~i~~d~lvlAtG~--~~~~~~~~~g~~-~~g 196 (497)
........++....++.+ ++++++++|++++.+. .+|++++|+++.+|+||+|||. .|. .|.++|.+ ..|
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~-~p~i~G~~~f~G 169 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQ-LPNFPGLKDFAG 169 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCC-CCCCTTGGGCCS
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCCC
Confidence 000000111122234444 5688899999987643 2678888888999999999995 454 45555532 334
Q ss_pred --EEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch-hh---ccCHHH----------
Q 010917 197 --VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-QR---LFTPSL---------- 260 (497)
Q Consensus 197 --v~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~---~~~~~~---------- 260 (497)
+++.+...+ .....+|+|+|||+|.+|+|+|..|++.+.+|+++.|.+.+. +. .+.+..
T Consensus 170 ~~~hs~~~~~~-----~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~ 244 (542)
T 1w4x_A 170 NLYHTGNWPHE-----PVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAE 244 (542)
T ss_dssp EEEEGGGCCSS-----CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHH
T ss_pred ceEECCCCCCc-----hhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHH
Confidence 222111001 011368999999999999999999999999999999887652 21 011110
Q ss_pred -------------------------------------------------------------HHHHHHH------------
Q 010917 261 -------------------------------------------------------------AQRYEQL------------ 267 (497)
Q Consensus 261 -------------------------------------------------------------~~~~~~~------------ 267 (497)
.+.+++.
T Consensus 245 l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (542)
T 1w4x_A 245 FREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAE 324 (542)
T ss_dssp HHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 0111111
Q ss_pred -----------------------HHHCCcEEE--cCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchh
Q 010917 268 -----------------------YQQNGVKFV--KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE 322 (497)
Q Consensus 268 -----------------------l~~~GV~i~--~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~ 322 (497)
+.+.+|+++ .+..|++++++ +|.++| +++++|.||+|||+++++.++.
T Consensus 325 ~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~------gv~~~d-~~~~~D~ii~atG~~~~~~~~~ 397 (542)
T 1w4x_A 325 RLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPR------GVRTSE-REYELDSLVLATGFDALTGALF 397 (542)
T ss_dssp HHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSS------EEEESS-CEEECSEEEECCCCCCTTHHHH
T ss_pred hcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCC------eEEeCC-eEEecCEEEEcCCccccccCcC
Confidence 112357776 36678888743 578889 8999999999999999888877
Q ss_pred hcCCcccCCCEEecCCCC----------C-CCCcEEEe-ccccccCCccCCcccccccH-HHHHHHHHHHHHHHhc
Q 010917 323 RVGLNSSVGGIQVDGQFR----------T-RMPGIFAI-GDVAAFPLKMYDRTARVEHV-DHARQSAQHCIKALLS 385 (497)
Q Consensus 323 ~~gl~~~~g~i~vd~~~~----------t-~~~~iya~-GD~~~~~~~~~g~~~~~~~~-~~A~~~g~~~a~~i~~ 385 (497)
.+++... +++.+++.++ + +.||+|++ |+.+.. ...++ ..+..|++.++++|..
T Consensus 398 ~~~i~g~-~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~---------~~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 398 KIDIRGV-GNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPS---------ALSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp TSEEECG-GGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSG---------GGSCHHHHHHHHHHHHHHHHHH
T ss_pred ceeeECC-CCCCHHHhhcCchheecccccCCCCceEEEcCCCCCc---------ccccHHHHHHHHHHHHHHHHHH
Confidence 6655443 3555554332 1 45666665 655421 12244 5688899999998853
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.88 E-value=7.2e-22 Score=175.35 Aligned_cols=153 Identities=22% Similarity=0.229 Sum_probs=130.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh--------cc-----CHHHHHHHHHHHHHCCcEEEcCCeEEEE
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR--------LF-----TPSLAQRYEQLYQQNGVKFVKGASIKNL 284 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------~~-----~~~~~~~~~~~l~~~GV~i~~~~~v~~i 284 (497)
+++|||+|++|+++|..|++.|.+|+++++.+.++.+ .+ ++++.+.+.+.+++.||+++.+ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999998766532 12 4688889999999999999999 99999
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCccCCccc
Q 010917 285 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 364 (497)
Q Consensus 285 ~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~g~~~ 364 (497)
+..+++ ..+.+++| ++++|.||+|+|..|+ +++.++++.++|.+.||++++|+.|+|||+|||+..+.+
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~~------ 150 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPT--LPSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVPG------ 150 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCH--HHHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCSC------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCC--ccccCCCCccCceEEeCCCCCcCCCCEEEeecccCcchh------
Confidence 865433 35777888 8999999999999984 567788887767788999999999999999999987532
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 010917 365 RVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 365 ~~~~~~~A~~~g~~~a~~i~~ 385 (497)
.+..|..+|+.+|.+|.+
T Consensus 151 ---~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 151 ---HAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp ---CHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHhHHHHHHHHHH
Confidence 556789999999999975
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.85 E-value=1.1e-19 Score=186.93 Aligned_cols=293 Identities=16% Similarity=0.202 Sum_probs=164.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCC-----------CCcEEEEcCCCCCCCCCCCCCccc------cCC----CC-C
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMA-----------DGRLCIVSKEAYAPYERPALTKGY------LFP----LD-K 115 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~-----------~~~V~lie~~~~~~~~~~~l~~~~------l~~----~~-~ 115 (497)
...+||||||+||+||++|..|.+.|.+ ....+.+|+.+.+.++...+..+. +.. .. .
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 4457999999999999999999986532 235788999887666533222111 000 00 0
Q ss_pred CCCCCC----------CCccc-----cCCCCCCCCHhHHHHcCcEEEeCCcEEEEecCC----------CEEEECCC---
Q 010917 116 KPARLP----------GFHTC-----VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEK----------QTLITNSG--- 167 (497)
Q Consensus 116 ~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~----------~~v~~~~g--- 167 (497)
.+..+. .|... ...++..++....++.+..++++++|+++.+.. .+|++.++
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g 196 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETG 196 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTC
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCc
Confidence 000000 00000 000011111222234466788899999986532 35665543
Q ss_pred --cEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHH-HHHHHhhccCCeEEEEcCCHHHHHHHHHHHhC--CCcE
Q 010917 168 --KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADA-DALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDT 242 (497)
Q Consensus 168 --~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~-~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~--g~~V 242 (497)
.++.++.||+|||..|. +|...+. .+.+.+...+.+. +.+......+|+|+|||+|.+|+|++..|++. +.+|
T Consensus 197 ~~~~~~ar~vVlatG~~P~-iP~~~~~-~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v 274 (501)
T 4b63_A 197 EISARRTRKVVIAIGGTAK-MPSGLPQ-DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRT 274 (501)
T ss_dssp CEEEEEEEEEEECCCCEEC-CCTTSCC-CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEE
T ss_pred eEEEEEeCEEEECcCCCCC-CCCCCCC-CcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceE
Confidence 36889999999998776 4433322 2344443333322 22222234789999999999999999999875 6799
Q ss_pred EEEecCCcchhh--------ccCHHH-------------------------------HHHHHHHH-----H-----HCCc
Q 010917 243 TIIFPENHLLQR--------LFTPSL-------------------------------AQRYEQLY-----Q-----QNGV 273 (497)
Q Consensus 243 tlv~~~~~~~~~--------~~~~~~-------------------------------~~~~~~~l-----~-----~~GV 273 (497)
+++.|++.+.+. .+.++. ...+.+.+ . ....
T Consensus 275 ~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~ 354 (501)
T 4b63_A 275 TLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQH 354 (501)
T ss_dssp EEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSS
T ss_pred EEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccce
Confidence 999998654321 111111 11111111 1 1123
Q ss_pred EEEcCCeEEEEEeCCC-CcE-----------EEEEeCCCcEEEcCEEEEeccCcCCCcc-h-hhcC-Cc-ccCCCEEecC
Q 010917 274 KFVKGASIKNLEAGSD-GRV-----------AAVKLEDGSTIDADTIVIGIGAKPTVSP-F-ERVG-LN-SSVGGIQVDG 337 (497)
Q Consensus 274 ~i~~~~~v~~i~~~~~-~~v-----------~~v~~~~g~~i~~D~vv~a~G~~p~~~~-~-~~~g-l~-~~~g~i~vd~ 337 (497)
.+..+..+..+..... +++ ..+.+.+|+++++|.||+|||++++... + ..+. +. ..+|...|+.
T Consensus 355 ~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~r 434 (501)
T 4b63_A 355 RILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHR 434 (501)
T ss_dssp EEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCT
T ss_pred eecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCC
Confidence 5666666666653322 221 1345678899999999999999988531 2 2111 11 2356777877
Q ss_pred CCCC--------CCCcEEEeccc
Q 010917 338 QFRT--------RMPGIFAIGDV 352 (497)
Q Consensus 338 ~~~t--------~~~~iya~GD~ 352 (497)
+++. ..++||+.|-+
T Consensus 435 dy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 435 DYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp TSBBCCCTTTBCTTCEEEECSCC
T ss_pred CcEEeecCCccCCCceEEecCCC
Confidence 6553 24679999944
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.71 E-value=5.9e-20 Score=187.59 Aligned_cols=223 Identities=15% Similarity=0.114 Sum_probs=128.4
Q ss_pred HHHHcCcEEEeCCcEEEEecCCCEE---EEC-CCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHH----
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEKQTL---ITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL---- 209 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~~~v---~~~-~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~---- 209 (497)
.+++.|++++.+++| .+..++..+ .+. ++..+.+|.||+|||+.+..++...+. ++ .+...+..+.+.
T Consensus 128 ~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~--~~-~tGdgi~~a~~aGa~~ 203 (472)
T 2e5v_A 128 LAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQ--ST-NIGDGMAIAFKAGTIL 203 (472)
T ss_dssp HHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSC--TT-CSCHHHHHHHHTTCCE
T ss_pred HHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCC--CC-CchHHHHHHHHcCCCE
Confidence 345679999999889 887665543 332 233578999999999987643321110 11 011000001100
Q ss_pred --HHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHH--------HHHHHHHHHHHCCcEEEcCC
Q 010917 210 --ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPS--------LAQRYEQLYQQNGVKFVKGA 279 (497)
Q Consensus 210 --~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~--------~~~~~~~~l~~~GV~i~~~~ 279 (497)
.+.......++++|+| +++++..+...|..+ +..+.++++++ +++. +...+.+.+++.|. ++.+.
T Consensus 204 ~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~ 278 (472)
T 2e5v_A 204 ADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEMLKGHK-VFIDL 278 (472)
T ss_dssp ECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHHHHTCC-EEEEC
T ss_pred eCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHHHhCCc-EEEec
Confidence 0001111234455766 888888899999877 78888888865 3333 25566666666653 22221
Q ss_pred eEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEeccCcCCCcchhhcCC-cccCCCEEecCCCCCCCCcEEEeccccccCC
Q 010917 280 SIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGL-NSSVGGIQVDGQFRTRMPGIFAIGDVAAFPL 357 (497)
Q Consensus 280 ~v~~i~~~~~~~v~~v~~~~g~~i~-~D~vv~a~G~~p~~~~~~~~gl-~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~ 357 (497)
+. + +. + .+.++ .|.++++.|..|+ +++..... ....|+|.||+++||+.|+|||+|||+....
T Consensus 279 ~~--~----~~------~--~~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~ 343 (472)
T 2e5v_A 279 SK--I----ED------F--ERKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGL 343 (472)
T ss_dssp TT--C----TT------H--HHHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSS
T ss_pred cc--h----HH------H--HHHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhccccc
Confidence 10 0 00 0 01233 4667788899998 65442211 1236899999999999999999999987321
Q ss_pred ccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 358 KMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 358 ~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
....+. ...+...+...|+.++.++.+
T Consensus 344 hg~~rl-~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 344 HGANRL-ASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp STTSCC-TTHHHHHHHHHHHHGGGTTTS
T ss_pred CCCCCC-CcccHHHHHHHHHHHHHHHHh
Confidence 100111 112344566677777777653
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.64 E-value=6e-15 Score=136.07 Aligned_cols=155 Identities=18% Similarity=0.243 Sum_probs=112.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC-----------------cchhhccC-------HHHHHHHHHHHHHC-
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN-----------------HLLQRLFT-------PSLAQRYEQLYQQN- 271 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-----------------~~~~~~~~-------~~~~~~~~~~l~~~- 271 (497)
.+|+|||+|+.|+++|..|++.|.+|+++++.. .+... ++ ..+...+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~-~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLER-AYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHH-HCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhh-hccCCCCCHHHHHHHHHHHHHcCC
Confidence 479999999999999999999999999999872 22221 21 26667788888887
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCC--------------------cc---hhhcCCcc
Q 010917 272 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV--------------------SP---FERVGLNS 328 (497)
Q Consensus 272 GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~--------------------~~---~~~~gl~~ 328 (497)
|++++ +.+|+++... ++.+..+.+.+|+++++|.||+|+|..++. .+ +.+.++..
T Consensus 83 gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~ 160 (232)
T 2cul_A 83 PLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRF 160 (232)
T ss_dssp TEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCE
T ss_pred CcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeE
Confidence 99999 4689999864 456667888899889999999999995442 22 23444443
Q ss_pred cCCC----------------EEecC-------CCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 329 SVGG----------------IQVDG-------QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 329 ~~g~----------------i~vd~-------~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
..+. ..+.. ...|++|+|||+|||+ ... .+..|..||+.+|.+|+.
T Consensus 161 ~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g----------~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 161 VEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG----------DYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp EEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC----------CHHHHHHHHHHHHHHHHH
T ss_pred EccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc----------cHHHHHHHHHHHHHHHHh
Confidence 2111 00110 1126899999999999 432 455688999999999974
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.63 E-value=6.1e-19 Score=171.81 Aligned_cols=251 Identities=14% Similarity=0.070 Sum_probs=141.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
..+||+|||||||||+||++|+++ |+ +|+|||+++..... ....++..+. .. ......
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~---~V~viEk~~~~GG~--~~~~~~~~~~-----~~----------l~~~~~ 123 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDL---KVCIIESSVAPGGG--SWLGGQLFSA-----MV----------MRKPAH 123 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSSSCCTT--TTCCSTTCCC-----EE----------EETTTH
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCC---eEEEEECCCCCCce--EEeCCccCCH-----HH----------HHHHHH
Confidence 457999999999999999999864 76 89999998764321 1111111110 00 012345
Q ss_pred hHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCC-Cc--EEEecCHHHHHHHHHhh
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL-PG--VHYIRDVADADALISSL 213 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~-~g--v~~~~~~~~~~~~~~~~ 213 (497)
..+++.|+++..+... ....+.++++++..+.. +..+|... .+ +..+. .. ....
T Consensus 124 ~~~~e~Gv~~~~~~~~----------------~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~---~~---~~~~ 180 (326)
T 3fpz_A 124 LFLQELEIPYEDEGDY----------------VVVKHAALFISTVLSKV-LQLPNVKLFNATCVEDLV---TR---PPTE 180 (326)
T ss_dssp HHHHHTTCCCEECSSE----------------EEESCHHHHHHHHHHHH-HTSTTEEEETTEEEEEEE---EE---SSCS
T ss_pred HHHHHcCCEEEECCcc----------------eecceeEEEEcchhhhc-cccccceeecccccceee---cc---CCcc
Confidence 6678888887654322 12334455666655443 22233211 11 11110 00 0113
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEE
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 293 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~ 293 (497)
..+++++++|+|.++++.|..+...+.+++++.+........ . +... . ..+.... ..++..
T Consensus 181 ~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~-~----------~~~~-~-----~~~~~~~-g~~~~~- 241 (326)
T 3fpz_A 181 KGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTR-D----------LSQK-H-----GVILSTT-GHDGPF- 241 (326)
T ss_dssp SSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSB-C----------TTSC-C-----CEEEECC-CSCSSS-
T ss_pred cCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccc-c----------ceee-c-----ceEEEEe-cceeeE-
Confidence 457899999999999999999999999999987765432210 0 0000 0 0111111 011110
Q ss_pred EEEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecCCCCCCCCcEEEeccccccCCcc--CCcccccccHHH
Q 010917 294 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKM--YDRTARVEHVDH 371 (497)
Q Consensus 294 ~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~--~g~~~~~~~~~~ 371 (497)
........+++|.+..+.|.+|... ....+.+.+|..++|+.|+|||+||++...... .|. ....
T Consensus 242 -~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~rmGp-----~~g~ 308 (326)
T 3fpz_A 242 -GAFCAKRIVDIDQNQKLGGMKGLDM-------NHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGP-----TFGA 308 (326)
T ss_dssp -CSHHHHHHHHHCTTCCCCCCCCBCH-------HHHHHHHHHHCEECTTSBTEEECTHHHHHHHTCCBCCS-----CCHH
T ss_pred -eecceeEEEecCceeeecceecccc-------cccCCeEEECCCeEECCCCEEEEchHhccccCCCcCch-----HHHH
Confidence 0000112355666677777766422 122356778888999999999999998632211 111 2223
Q ss_pred HHHHHHHHHHHHh
Q 010917 372 ARQSAQHCIKALL 384 (497)
Q Consensus 372 A~~~g~~~a~~i~ 384 (497)
++..|+.||+.|+
T Consensus 309 mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 309 MALSGVHAAEQIL 321 (326)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4567888888775
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.52 E-value=6.9e-16 Score=154.05 Aligned_cols=121 Identities=20% Similarity=0.199 Sum_probs=73.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------CCCCCCc------cccCCCCCCCC--------
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK------GYLFPLDKKPA-------- 118 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-------~~~~l~~------~~l~~~~~~~~-------- 118 (497)
.+||+|||||+||++||..|+++|. +|+|+|+.+.... .+..+.. .++........
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~---~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGK---SVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTN 80 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCC---CEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCH
Confidence 4799999999999999999999997 8999999875310 0111100 01100000000
Q ss_pred ----------CCC------CCccc--cCCCCCCCCHhHHHHcCcEEEeCCcEEEEecC----CC--EEEECCCcEEEecc
Q 010917 119 ----------RLP------GFHTC--VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIE----KQ--TLITNSGKLLKYGS 174 (497)
Q Consensus 119 ----------~~~------~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~g~~i~~d~ 174 (497)
.++ +.... ........+.+.+++.|++++++++|+++..+ .. .+.++++ ++.+|+
T Consensus 81 ~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~ 159 (401)
T 2gqf_A 81 WDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKN 159 (401)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESE
T ss_pred HHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCE
Confidence 000 00000 00000112334456679999999999988754 22 4666665 699999
Q ss_pred EEeccCCCCC
Q 010917 175 LIVATGCTAS 184 (497)
Q Consensus 175 lvlAtG~~~~ 184 (497)
||+|||+.+.
T Consensus 160 VVlAtG~~s~ 169 (401)
T 2gqf_A 160 LIVATGGLSM 169 (401)
T ss_dssp EEECCCCSSC
T ss_pred EEECCCCccC
Confidence 9999999874
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.23 E-value=1.5e-12 Score=131.62 Aligned_cols=95 Identities=17% Similarity=0.266 Sum_probs=71.3
Q ss_pred CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEecc--------CcCCCcchhh--cCC
Q 010917 257 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--------AKPTVSPFER--VGL 326 (497)
Q Consensus 257 ~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G--------~~p~~~~~~~--~gl 326 (497)
+..+...+...+++.| ++++++.|++|+..++ .+ .|.+.+|+++.+|.||+|+| +.|+.+.... ++.
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~ 279 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGD-VV-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE 279 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSS-SE-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCC-eE-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh
Confidence 3344556666667778 9999999999986544 34 47888898899999999999 8888765322 211
Q ss_pred cccCCCEEecCCCCCCCCcEEEeccccc
Q 010917 327 NSSVGGIQVDGQFRTRMPGIFAIGDVAA 354 (497)
Q Consensus 327 ~~~~g~i~vd~~~~t~~~~iya~GD~~~ 354 (497)
......++|+..++|+.++||+.||+..
T Consensus 280 ~~~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 280 GHGGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp CCCCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred CCCcceEEEEEEECCCCcCceEcCCCCE
Confidence 1223469999999999999999999853
No 100
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.21 E-value=4.9e-11 Score=113.24 Aligned_cols=164 Identities=17% Similarity=0.181 Sum_probs=110.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEecCCcchhh------------------------------------c-cCH
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQR------------------------------------L-FTP 258 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~------------------------------------~-~~~ 258 (497)
.+|+|||+|++|+.+|..|++. |.+|+++++.+.+... . ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999988654210 0 113
Q ss_pred HHHHHHHHHHHH-CCcEEEcCCeEEEEEeCCCCcEEEEEeC---------CC-----cEEEcCEEEEeccCcCCCcc---
Q 010917 259 SLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLE---------DG-----STIDADTIVIGIGAKPTVSP--- 320 (497)
Q Consensus 259 ~~~~~~~~~l~~-~GV~i~~~~~v~~i~~~~~~~v~~v~~~---------~g-----~~i~~D~vv~a~G~~p~~~~--- 320 (497)
.+...+.+.+.+ .||+++++++|+++..+ ++++..+.+. +| .++++|.||+|+|..++...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~ 198 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGV 198 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHH
Confidence 444556666655 69999999999999854 4555555542 32 57999999999998876432
Q ss_pred --hhhcC----CcccCCCEEecC-------CCCCCCCcEEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 010917 321 --FERVG----LNSSVGGIQVDG-------QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 385 (497)
Q Consensus 321 --~~~~g----l~~~~g~i~vd~-------~~~t~~~~iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~~a~~i~~ 385 (497)
+..++ +... .++.+|. +.+++.|++|++||++... .+.......+..+..+|+.+|.++..
T Consensus 199 ~~~~~~g~~~~v~~~-~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 199 KRLKSIGMIDHVPGM-KALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHHTTSSSCCCCC-EEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcCCc-CCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 22222 1111 2343332 3456779999999987431 11111112456678899999988875
No 101
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.17 E-value=5.3e-11 Score=104.85 Aligned_cols=107 Identities=18% Similarity=0.202 Sum_probs=74.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCcc-ccCCCCCCCCHhHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPEWY 139 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 139 (497)
++|+|||||++|+++|..|++.|. +|+|+|+.+........+ ..+++++. ..+......+.+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~---~v~lie~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~ 66 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL---KVLVLDGGRSKVKGVSRV------------PNYPGLLDEPSGEELLRRLEAHA 66 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCTTTTCSCC------------CCSTTCTTCCCHHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCcccCchhh------------hccCCCcCCCCHHHHHHHHHHHH
Confidence 689999999999999999999987 899999986432110000 01111100 00011122345566
Q ss_pred HHcCcEEEeCCcEEEEecCC--CEEEECCCcEEEeccEEeccCCCCC
Q 010917 140 KEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
++.|++++.+ +|++++.+. ..+.+++| ++.+|.||+|+|..|.
T Consensus 67 ~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 67 RRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH
T ss_pred HHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC
Confidence 7789999998 999987644 36777777 7999999999999874
No 102
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.11 E-value=6.7e-10 Score=114.79 Aligned_cols=160 Identities=15% Similarity=0.090 Sum_probs=92.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC-CCCCCCCCCCccccC-----------CCC------C--CC-
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA-YAPYERPALTKGYLF-----------PLD------K--KP- 117 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~-~~~~~~~~l~~~~l~-----------~~~------~--~~- 117 (497)
..+||+|||||+||++||..|++.|. +|+|||+.. ......+..+.+... +.. . ..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~---kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGA---KTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 35899999999999999999999997 899999974 221110100000000 000 0 00
Q ss_pred -----CCCCCCcc---c-cCCCCCCCCHhHHHH-cCcEEEeCCcEEEEecCCC---EEEECCCcEEEeccEEeccCCCCC
Q 010917 118 -----ARLPGFHT---C-VGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 118 -----~~~~~~~~---~-~~~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
..-+.... . ....+...+.+.+++ .|++++ +++|+.+..++. .|.+.+|..+.+|.||+|||..+.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 00000000 0 000000112233445 489985 579999876554 367788888999999999998765
Q ss_pred cCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEe
Q 010917 185 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 246 (497)
Q Consensus 185 ~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~ 246 (497)
. +..+ |.... .+.+ .|+.+++++|..|.+.|.+++.+.
T Consensus 182 ~-~~~~-----G~~~~--------------~~Gr----~G~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 182 G-VIYI-----GDKMI--------------PGGR----LGEPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp C-EEEE-----TTEEE--------------ECSB----TTBCCBCTHHHHHHHTTCCCEEEE
T ss_pred C-ceec-----cceec--------------CCCC----CCchhHHHHHHHHHhcCCceEEec
Confidence 3 2222 22221 1122 235678899999999998776553
No 103
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.09 E-value=1.5e-11 Score=126.29 Aligned_cols=169 Identities=15% Similarity=-0.027 Sum_probs=97.2
Q ss_pred eecccccccCccccc---CCCCcccccCC-CCchhhhcccccc------------------cccccCCCCCcEEEEcCch
Q 010917 13 VSNSLSFKHGLSLWC---PQSPSLHRIRH-SSAKNFQRRGFVV------------------AYSSFANENREFVIVGGGN 70 (497)
Q Consensus 13 ~~~~~~~~~g~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~~~~~~~VvIIGgG~ 70 (497)
.+||||.+||+.|+. +|...|.+... ++.+..+++.+.. .........+||+|||||+
T Consensus 23 ~~~~~~~~~~rvc~~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~ 102 (497)
T 2bry_A 23 ETFVQAQLCQDVLSSFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGP 102 (497)
T ss_dssp HHHHHCCSHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccH
Confidence 678999999998876 46666666331 1222222221111 0111134568999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCCcc---ccCCCCC--CCCCC--CCCccccCCCCCCCCHhHHHHc
Q 010917 71 AAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKG---YLFPLDK--KPARL--PGFHTCVGSGGERQTPEWYKEK 142 (497)
Q Consensus 71 AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~-~l~~~---~l~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 142 (497)
+|+++|..|++.|+ +|+|||+.+...-.+. .+... .+..... ....+ ..+.......+...+.+.+++.
T Consensus 103 aGl~aA~~La~~G~---~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 179 (497)
T 2bry_A 103 CGLRAAVELALLGA---RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLL 179 (497)
T ss_dssp HHHHHHHHHHHTTC---EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCC---eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhC
Confidence 99999999999997 8999999865421100 00000 0000000 00000 0000000000011233445567
Q ss_pred CcEEEeCCcEEEEecC-----CCEEEE--C-CC--cEEEeccEEeccCCCCC
Q 010917 143 GIEMIYQDPVTSIDIE-----KQTLIT--N-SG--KLLKYGSLIVATGCTAS 184 (497)
Q Consensus 143 ~v~~~~~~~v~~i~~~-----~~~v~~--~-~g--~~i~~d~lvlAtG~~~~ 184 (497)
|++++++++|+++..+ ...+++ . +| .++.+|+||+|+|..+.
T Consensus 180 gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 180 GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 9999999999999763 235666 3 55 46899999999998764
No 104
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.07 E-value=3.1e-10 Score=118.90 Aligned_cols=36 Identities=25% Similarity=0.360 Sum_probs=31.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+||||||||+||++||..|++.|. +.+|+|||+.+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~-~~~V~vlEk~~ 40 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANP-NAKIALISKVY 40 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCT-TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCC-CCcEEEEeCCC
Confidence 4799999999999999999999982 23899999975
No 105
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.98 E-value=5.2e-10 Score=116.03 Aligned_cols=160 Identities=12% Similarity=0.111 Sum_probs=90.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC-CCCCCCCCCccccC-----------CCC------------
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYERPALTKGYLF-----------PLD------------ 114 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~-~~~~~~~l~~~~l~-----------~~~------------ 114 (497)
..+||+|||||+||++||..|++.|. +|+|||+... .....+..+.+... ...
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQ---QTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCC---CEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 35899999999999999999999998 8999999742 21110100110000 000
Q ss_pred CC--CCCCCCCcc----ccCCCCCCCCHhHHHH-cCcEEEeCCcEEEEecCCC---EEEECCCcEEEeccEEeccCCCCC
Q 010917 115 KK--PARLPGFHT----CVGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 115 ~~--~~~~~~~~~----~~~~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
.. ...-+.... .....+...+.+.+++ .|++++ +++|+.+..++. .|.+.+|..+.+|.||+|||+.+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 00 000000000 0000000112234455 589995 579999976544 467778888999999999998765
Q ss_pred cCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEe
Q 010917 185 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 246 (497)
Q Consensus 185 ~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~ 246 (497)
. +.. +|.... .+.+ +| |.+++++|..|.+.|.+|+.+.
T Consensus 183 ~-~~i-----~G~~~~--------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 183 G-KIH-----IGLDNY--------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp C-EEE-----CC-------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred C-ccc-----cCcccC--------------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 3 222 222211 1222 46 7889999999999999998874
No 106
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.97 E-value=2.4e-10 Score=117.26 Aligned_cols=147 Identities=14% Similarity=0.102 Sum_probs=102.7
Q ss_pred EeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHH---------HHh--hccCCeEEEEcCCHHHHHHHHHHHhCC
Q 010917 171 KYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL---------ISS--LEKAKKVVVVGGGYIGMEVAAAAVGWK 239 (497)
Q Consensus 171 ~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~---------~~~--~~~~~~vvVvG~G~~g~e~A~~l~~~g 239 (497)
.||.+++++|+.+.. +.+++...+++.......+...+ ... .....+|+|||||+.|+.+|..|++.|
T Consensus 37 ~~~~l~~~~g~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G 115 (497)
T 2bry_A 37 SFQGLCRALGVESGG-GLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLG 115 (497)
T ss_dssp HHHHHHHHHTCCTTC-HHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCC-CcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCC
Confidence 578899999999753 33333333344444444444443 111 123578999999999999999999999
Q ss_pred CcEEEEecCCcchhh--------------------------------ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeC
Q 010917 240 LDTTIIFPENHLLQR--------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG 287 (497)
Q Consensus 240 ~~Vtlv~~~~~~~~~--------------------------------~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~ 287 (497)
.+|+|+++.+.+... .-...+...+.+.+++.||+++++++|++++..
T Consensus 116 ~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~ 195 (497)
T 2bry_A 116 ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPP 195 (497)
T ss_dssp CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECC
T ss_pred CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEe
Confidence 999999988653200 001456667788888899999999999999853
Q ss_pred C-CCcEEEEEe--C-CC--cEEEcCEEEEeccCcCCC
Q 010917 288 S-DGRVAAVKL--E-DG--STIDADTIVIGIGAKPTV 318 (497)
Q Consensus 288 ~-~~~v~~v~~--~-~g--~~i~~D~vv~a~G~~p~~ 318 (497)
+ ++....+.+ . +| +++.+|.||.|+|..+..
T Consensus 196 ~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 196 PRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred cCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 2 222234555 4 66 579999999999998765
No 107
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.96 E-value=8.2e-10 Score=113.69 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 257 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 257 ~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
...+.+.+.+.+++.|++|++++.|++|... ++++..|++.||+++.+|.||++++..
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC--
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 3467788889999999999999999999865 678889999999999999999987653
No 108
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.96 E-value=1.5e-08 Score=99.66 Aligned_cols=68 Identities=13% Similarity=0.269 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEeccCcCCCcchhhc-CC
Q 010917 257 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERV-GL 326 (497)
Q Consensus 257 ~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~~D~vv~a~G~~p~~~~~~~~-gl 326 (497)
+..+...+.+.+++.|++++++++|++++..+++.+ .|.+.+| .++.+|.||+|+|.... .+++.+ |+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~ 219 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETS
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCC
Confidence 346777888889999999999999999987644434 4778887 48999999999998743 555655 54
No 109
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.95 E-value=5.8e-10 Score=111.50 Aligned_cols=124 Identities=20% Similarity=0.274 Sum_probs=73.3
Q ss_pred cCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-------CCCCC------ccccCCCCCCC-----
Q 010917 56 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-------RPALT------KGYLFPLDKKP----- 117 (497)
Q Consensus 56 ~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-------~~~l~------~~~l~~~~~~~----- 117 (497)
|++..+||+|||||+||++||..|+++|+ +|+|+|+.+..... +..+. ..+........
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~---~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGR---RVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALA 99 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHH
Confidence 44567899999999999999999999998 89999998753210 00000 00000000000
Q ss_pred -------------------CCCCCCcccc--CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEecc
Q 010917 118 -------------------ARLPGFHTCV--GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGS 174 (497)
Q Consensus 118 -------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~ 174 (497)
..-.+..... .....+.+.+.+++.|++++++++|+++..++. .|.+.+| ++.+|+
T Consensus 100 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~ 178 (417)
T 3v76_A 100 RYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAAS 178 (417)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESE
T ss_pred hcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeE
Confidence 0000000000 000111233445667999999999999976554 5666677 799999
Q ss_pred EEeccCCCC
Q 010917 175 LIVATGCTA 183 (497)
Q Consensus 175 lvlAtG~~~ 183 (497)
||+|||...
T Consensus 179 VIlAtG~~S 187 (417)
T 3v76_A 179 LVVASGGKS 187 (417)
T ss_dssp EEECCCCSS
T ss_pred EEECCCCcc
Confidence 999999875
No 110
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.92 E-value=1.2e-09 Score=100.47 Aligned_cols=116 Identities=16% Similarity=0.148 Sum_probs=71.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCC-CCCccccCC---CCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARL-PGFHTCVGS---GGERQT 135 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~---~~~~~~ 135 (497)
.+||+|||||++|+++|..|++.|. +|+|||+...... .+ ... .... .. ...+ ..+....+. .+...+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~---~v~lie~~~~~~G-~~-~~~-~~~~-~~-~~~~~~~~~d~~g~~~~~~~~~l 74 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGV---RVGLLTQSLDAVM-MP-FLP-PKPP-FP-PGSLLERAYDPKDERVWAFHARA 74 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTT-CC-SSC-CCSC-CC-TTCHHHHHCCTTCCCHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCcCC-cc-cCc-cccc-cc-hhhHHhhhccCCCCCHHHHHHHH
Confidence 5799999999999999999999987 8999999732110 00 000 0000 00 0000 000000000 001123
Q ss_pred HhHHHHc-CcEEEeCCcEEEEecCCC---EEEECCCcEEEeccEEeccCCCCC
Q 010917 136 PEWYKEK-GIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 136 ~~~~~~~-~v~~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
.+.+++. +++++. ++|+++..++. .+.+.+|.++.+|+||+|||....
T Consensus 75 ~~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 75 KYLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 3445565 899884 69999876544 366778888999999999998654
No 111
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.91 E-value=3.7e-11 Score=126.24 Aligned_cols=59 Identities=14% Similarity=0.278 Sum_probs=46.2
Q ss_pred HHCCcEEEcCCeEEEEEeCCC-CcEEEEEeC---CCc--EEEcCEEEEeccCcCCCcchhhcCCc
Q 010917 269 QQNGVKFVKGASIKNLEAGSD-GRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLN 327 (497)
Q Consensus 269 ~~~GV~i~~~~~v~~i~~~~~-~~v~~v~~~---~g~--~i~~D~vv~a~G~~p~~~~~~~~gl~ 327 (497)
++.||++++++.|++|..+++ +++.+|.+. +|+ ++.+|.||+|+|..|+..++..+|+-
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 345899999999999986533 367777764 354 68899999999999998888776653
No 112
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.87 E-value=1.8e-09 Score=106.96 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=76.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---------------CCccccCCCCCCCCC----
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---------------LTKGYLFPLDKKPAR---- 119 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~---------------l~~~~l~~~~~~~~~---- 119 (497)
..+||+|||||++|+++|..|++.|+ +|+|+|+.+........ +...+.. .......
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~ 85 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGW---DVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQ-GSHTPPTYETW 85 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHT-TCBCCSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHh-hCCCccceEEE
Confidence 35799999999999999999999998 89999998654211000 0000000 0000000
Q ss_pred --------CC--CCc--cccCCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCC
Q 010917 120 --------LP--GFH--TCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 120 --------~~--~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
++ +.. ......+...+.+.+.+.|++++.+++|+.++.+. .+++.+|+++.+|.||.|+|....
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred eCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHH
Confidence 00 000 00000001122344456799999999999998755 888888988999999999998753
No 113
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.86 E-value=6.1e-09 Score=107.13 Aligned_cols=124 Identities=18% Similarity=0.218 Sum_probs=76.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--------------CCC---CCCC-cc-ccCCCCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--------------YER---PALT-KG-YLFPLDKKPA 118 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~--------------~~~---~~l~-~~-~l~~~~~~~~ 118 (497)
...+||+||||||+|++||..|++.|+ +|+|+|+.+... +.. .... .+ ..+.......
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~---kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~ 181 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGF---NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYS 181 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTC---CCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEE
Confidence 345899999999999999999999998 899999985320 000 0000 00 0000000000
Q ss_pred CCCC--C--------------c-cc--cC---------CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCC---EEEECCC
Q 010917 119 RLPG--F--------------H-TC--VG---------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSG 167 (497)
Q Consensus 119 ~~~~--~--------------~-~~--~~---------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~g 167 (497)
.+.. . . .. .. ..+...+.+.+++.|++++++++|+.+..+.. .|.+++|
T Consensus 182 ~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G 261 (549)
T 3nlc_A 182 QVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG 261 (549)
T ss_dssp CSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS
T ss_pred EeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC
Confidence 0000 0 0 00 00 00011223345667999999999999987654 3778888
Q ss_pred cEEEeccEEeccCCCCC
Q 010917 168 KLLKYGSLIVATGCTAS 184 (497)
Q Consensus 168 ~~i~~d~lvlAtG~~~~ 184 (497)
+++.+|.||+|+|..+.
T Consensus 262 ~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 262 EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp CEEECSCEEECCCTTCH
T ss_pred CEEECCEEEECCCCChh
Confidence 89999999999999874
No 114
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.85 E-value=8.9e-08 Score=102.23 Aligned_cols=66 Identities=15% Similarity=0.160 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc-EEEcCEEEEeccCcCCCcchhhcCC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPTVSPFERVGL 326 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~-~i~~D~vv~a~G~~p~~~~~~~~gl 326 (497)
..+...+.+.+++.|++++++++|+++...+++ + .|.+.+|+ ++.+|.||+|+|.... .++...++
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~~i~Ad~VVlAtG~~s~-~l~~~~~l 478 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQSQAAKHHATVILATGHRLP-EWEQTHHL 478 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC-CCCCEEESEEEECCGGGTT-CSTTTTTS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCCCcEEEECCEEEECCCcchh-ccccccCC
Confidence 467778888889999999999999999876444 3 67888887 8999999999998743 34433333
No 115
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.84 E-value=6.3e-08 Score=101.00 Aligned_cols=61 Identities=20% Similarity=0.250 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEeccCcCC
Q 010917 257 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 317 (497)
Q Consensus 257 ~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vv~a~G~~p~ 317 (497)
...+...+.+.+++.||++++++.++++..++++++.+|... +|+ ++.+|.||+|+|..++
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 346777888888999999999999999975532777666664 564 6899999999997653
No 116
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.83 E-value=3.8e-09 Score=106.99 Aligned_cols=123 Identities=19% Similarity=0.293 Sum_probs=74.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------CCCCCCc-----ccc--CCCCCC-CC----
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK-----GYL--FPLDKK-PA---- 118 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-------~~~~l~~-----~~l--~~~~~~-~~---- 118 (497)
.+++||+|||||+||++||..|+++|. +|+|+|+.+...- .+..+.. .++ ...... ..
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~---~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGA---NVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFS 100 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCC---CEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHH
Confidence 345899999999999999999999987 8999999864320 0000000 000 000000 00
Q ss_pred CC-----------CCCcc--------cc----CCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCC---EEEECCCcEEEe
Q 010917 119 RL-----------PGFHT--------CV----GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKY 172 (497)
Q Consensus 119 ~~-----------~~~~~--------~~----~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~g~~i~~ 172 (497)
.+ .+... +. .......+.+.+++.|++++++++|+++..++. .|.+.+|+.+.+
T Consensus 101 ~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~A 180 (447)
T 2i0z_A 101 IFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLET 180 (447)
T ss_dssp HSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEEC
T ss_pred hcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEEC
Confidence 00 00000 00 000011223445667999999999999975443 477788877999
Q ss_pred ccEEeccCCCC
Q 010917 173 GSLIVATGCTA 183 (497)
Q Consensus 173 d~lvlAtG~~~ 183 (497)
|.||+|||...
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999876
No 117
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.83 E-value=2.4e-08 Score=100.20 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc--EEEcCEEEEeccCcCCCcchhhcCCc
Q 010917 259 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTVSPFERVGLN 327 (497)
Q Consensus 259 ~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~--~i~~D~vv~a~G~~p~~~~~~~~gl~ 327 (497)
.+...+.+.+++.|++++.+++|++++..+++....+.+.+|+ ++.+|.||.|+|... .+.+.+++.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s--~l~~~~g~~ 175 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR--VIPRMFGLD 175 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC--HHHHHTTCE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch--hhHHhcCCC
Confidence 4555666777778999999999999987655555567778887 799999999999875 333444443
No 118
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.81 E-value=1.6e-08 Score=105.08 Aligned_cols=59 Identities=20% Similarity=0.377 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHC-CcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 258 PSLAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 258 ~~~~~~~~~~l~~~-GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+...+.+.+++. ||+++.+ +|++++..+++.+..|.+.+|+++.+|.||.|+|....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 35677788888888 9999999 99999876567777888999989999999999998764
No 119
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.80 E-value=1.2e-07 Score=101.17 Aligned_cols=57 Identities=14% Similarity=0.213 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p 316 (497)
..+...+.+.+++.|++++++++|+++...+ +.+ .|.+.+|.++.+|.||+|+|...
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-CeE-EEEECCCCEEECCEEEECCCcch
Confidence 4677788888899999999999999998653 343 67888888899999999999864
No 120
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.77 E-value=3.7e-08 Score=101.28 Aligned_cols=111 Identities=15% Similarity=0.294 Sum_probs=87.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh-----------------------------------------
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 254 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 254 (497)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+..+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987543000
Q ss_pred ------------------------------ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEE
Q 010917 255 ------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID 304 (497)
Q Consensus 255 ------------------------------~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~ 304 (497)
.....+.+.+.+.+++.|++++++++|+++... ++.+..|.+.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEE
Confidence 001345566778888899999999999999864 5667789999999999
Q ss_pred cCEEEEeccCcCCC--cchhhcCCc
Q 010917 305 ADTIVIGIGAKPTV--SPFERVGLN 327 (497)
Q Consensus 305 ~D~vv~a~G~~p~~--~~~~~~gl~ 327 (497)
+|.||+|+|..+.. ..+...|+.
T Consensus 266 Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 266 SRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp CSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred CCEEEECCCCChhhHHHHHHHcCCC
Confidence 99999999998852 235555554
No 121
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.75 E-value=1.9e-07 Score=93.03 Aligned_cols=65 Identities=18% Similarity=0.301 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 325 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~g 325 (497)
..+...+.+.+++.|++++.+++|+++... ++.+..+.+.+| ++.+|.||+|+|...+ .+.+.++
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~-~l~~~~g 238 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSS-VLAEMAG 238 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHH-HHHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHH-HHHHHcC
Confidence 367777888889999999999999999865 456667888887 6999999999998653 3444443
No 122
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.75 E-value=2.6e-08 Score=96.63 Aligned_cols=119 Identities=15% Similarity=0.188 Sum_probs=69.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---------CCCccccCCC-----------------
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------ALTKGYLFPL----------------- 113 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---------~l~~~~l~~~----------------- 113 (497)
++||+|||||++|+++|..|++.|+ +|+|+|+.+...-... .....++...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~---~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC---cEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCe
Confidence 4799999999999999999999998 8999999864210000 0000000000
Q ss_pred ------------CCCCCCCCCCccccCCCCCCCCHhHHHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEE-eccEEec
Q 010917 114 ------------DKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLK-YGSLIVA 178 (497)
Q Consensus 114 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~-~d~lvlA 178 (497)
.....................+.+.+. .+++++++++|++++.+.. ++++++|+.+. +|+||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a 157 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIA 157 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEEC
T ss_pred eeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEc
Confidence 000000000000000001111112222 3899999999999986543 67778887664 9999999
Q ss_pred cCCC
Q 010917 179 TGCT 182 (497)
Q Consensus 179 tG~~ 182 (497)
+|..
T Consensus 158 ~g~~ 161 (336)
T 1yvv_A 158 TPAP 161 (336)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 9964
No 123
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.73 E-value=1.3e-07 Score=92.38 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=78.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhc----------------------c---------CHHHHHHHH
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL----------------------F---------TPSLAQRYE 265 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~----------------------~---------~~~~~~~~~ 265 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.... . ...+..++.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 479999999999999999999999999999886532110 0 057788888
Q ss_pred HHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 266 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 266 ~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
+.+++.|++++.+++|++++.. ++.+..+.+.+| ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 8899999999999999999865 333322777777 89999999999963
No 124
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.73 E-value=4.6e-08 Score=97.41 Aligned_cols=123 Identities=12% Similarity=0.075 Sum_probs=73.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---CCCcc---cc--CCC--CCCCCCCCCCccc-
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---ALTKG---YL--FPL--DKKPARLPGFHTC- 126 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---~l~~~---~l--~~~--~~~~~~~~~~~~~- 126 (497)
+.+++|+|||||++|+++|..|++.|+ +|+|+|+.+.....+. .+... .+ ... .............
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 79 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGV---DVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVD 79 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEe
Confidence 345799999999999999999999998 8999999865311100 00000 00 000 0000000000000
Q ss_pred --cCCC-------C--C--CCCHhHHHH--cCcEEEeCCcEEEEecCC--CEEEECCCcEEEeccEEeccCCCC
Q 010917 127 --VGSG-------G--E--RQTPEWYKE--KGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTA 183 (497)
Q Consensus 127 --~~~~-------~--~--~~~~~~~~~--~~v~~~~~~~v~~i~~~~--~~v~~~~g~~i~~d~lvlAtG~~~ 183 (497)
.+.. . . ..+.+.+.+ .+++++++++|+++..+. .++++.+|+++.+|.||.|+|...
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 80 ALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp TTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred cCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 0000 0 0 011222222 388999999999997654 367788888899999999999864
No 125
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.73 E-value=9.8e-09 Score=102.34 Aligned_cols=122 Identities=14% Similarity=0.200 Sum_probs=72.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCC--C-------------ccc------------cCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL--T-------------KGY------------LFP 112 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l--~-------------~~~------------l~~ 112 (497)
++||+|||||++|+++|..|+++|+ +|+|+|+.+......... . ..+ ...
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~---~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGH---RVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYH 82 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeC
Confidence 4799999999999999999999998 899999986531110000 0 000 000
Q ss_pred CCCCCCCCC--C-----CccccC-CCCCCCCHhHHHHc-CcEEEeCCcEEEEecCCC----EEEECCCcEEEeccEEecc
Q 010917 113 LDKKPARLP--G-----FHTCVG-SGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVAT 179 (497)
Q Consensus 113 ~~~~~~~~~--~-----~~~~~~-~~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~----~v~~~~g~~i~~d~lvlAt 179 (497)
.......+. . +..... ..+...+.+.+.+. |++++.+++|++++.+.. .+++.+|+++.+|.||.|+
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 83 DGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp TTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECC
T ss_pred CCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECC
Confidence 000000000 0 000000 00000111223334 899999999999976543 6778888889999999999
Q ss_pred CCCCC
Q 010917 180 GCTAS 184 (497)
Q Consensus 180 G~~~~ 184 (497)
|....
T Consensus 163 G~~s~ 167 (399)
T 2x3n_A 163 GIASY 167 (399)
T ss_dssp CTTCH
T ss_pred CCChH
Confidence 98653
No 126
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.72 E-value=2.2e-08 Score=101.41 Aligned_cols=66 Identities=23% Similarity=0.393 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeC--------------CCCcEEEEEeCCCcEE--EcCEEEEeccCcCCCcch
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAG--------------SDGRVAAVKLEDGSTI--DADTIVIGIGAKPTVSPF 321 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~--------------~~~~v~~v~~~~g~~i--~~D~vv~a~G~~p~~~~~ 321 (497)
..+...+.+.+++.|++++.+++|++++.. +++.+..|.+.+| ++ .+|.||+|+|.... .++
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~-~l~ 258 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN-RLL 258 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH-HHH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH-HHH
Confidence 367788888899999999999999999861 2455656788888 58 99999999997643 344
Q ss_pred hhcC
Q 010917 322 ERVG 325 (497)
Q Consensus 322 ~~~g 325 (497)
..++
T Consensus 259 ~~~g 262 (448)
T 3axb_A 259 NPLG 262 (448)
T ss_dssp GGGT
T ss_pred HHcC
Confidence 4443
No 127
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.72 E-value=8.4e-09 Score=106.63 Aligned_cols=48 Identities=10% Similarity=0.133 Sum_probs=38.0
Q ss_pred HHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 266 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 266 ~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
...++.|+++++++.|++|+.. ++.+. |.+.+|+++.+|.||++++..
T Consensus 220 ~l~~~lg~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 220 RIMDLLGDRVKLERPVIYIDQT-RENVL-VETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHGGGEESSCCEEEEECS-SSSEE-EEETTSCEEEESEEEECSCGG
T ss_pred HHHHHcCCcEEcCCeeEEEEEC-CCeEE-EEECCCeEEEeCEEEECCCHH
Confidence 3344448899999999999865 34443 888899999999999999864
No 128
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.71 E-value=1.5e-08 Score=105.52 Aligned_cols=122 Identities=17% Similarity=0.147 Sum_probs=71.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---------------CCCccccCCCCCCCCC-CCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------------ALTKGYLFPLDKKPAR-LPG 122 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---------------~l~~~~l~~~~~~~~~-~~~ 122 (497)
+++||+||||||+|+++|..|+++|+ +|+|||+.+....... .+...+.......... +.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~---~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGV---GALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTC---CEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCC
Confidence 45799999999999999999999998 8999999865321100 0000000000000000 000
Q ss_pred C-------ccccCCC-C---------CCCCHhHHHHcCcEEEeCCcEEEEecCCC--EEEE--CCC-cEEEeccEEeccC
Q 010917 123 F-------HTCVGSG-G---------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLIT--NSG-KLLKYGSLIVATG 180 (497)
Q Consensus 123 ~-------~~~~~~~-~---------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~--~~g-~~i~~d~lvlAtG 180 (497)
. ....... . ...+.+.+.+.|++++.+++|+.++.+.. ++++ .+| +++.+|+||.|.|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG 204 (570)
T 3fmw_A 125 IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDG 204 (570)
T ss_dssp BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSC
T ss_pred cccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCC
Confidence 0 0000000 0 00122334456999999999999876554 4555 677 6899999999999
Q ss_pred CCC
Q 010917 181 CTA 183 (497)
Q Consensus 181 ~~~ 183 (497)
...
T Consensus 205 ~~S 207 (570)
T 3fmw_A 205 GRS 207 (570)
T ss_dssp SSC
T ss_pred CCc
Confidence 864
No 129
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.69 E-value=1e-08 Score=106.39 Aligned_cols=161 Identities=12% Similarity=0.156 Sum_probs=91.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC-CCCCCCCCCcccc-----------CCCC-----------
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYERPALTKGYL-----------FPLD----------- 114 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~-~~~~~~~l~~~~l-----------~~~~----------- 114 (497)
...+||+|||||+||++||..|++.|. +|+|+|+... .....+..+.+.. .+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~ 95 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGL---HCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQ 95 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCC---cEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCc
Confidence 345899999999999999999999997 8999999742 1111000000000 0000
Q ss_pred -C--CCCCCCCCcc---ccC-CCCCCCCHhHHHH-cCcEEEeCCcEEEEecCCCE---EEECCCcEEEeccEEeccCCCC
Q 010917 115 -K--KPARLPGFHT---CVG-SGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTA 183 (497)
Q Consensus 115 -~--~~~~~~~~~~---~~~-~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~g~~i~~d~lvlAtG~~~ 183 (497)
. ....-+.... ... ..+...+.+.+++ .|++++. .+|+.+..++.. |.+.+|..+.+|.||+|||+.+
T Consensus 96 f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 96 FRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp EEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred hhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 0 0000000000 000 0000112233444 3899865 589888765543 6677888899999999999876
Q ss_pred CcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEE
Q 010917 184 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTII 245 (497)
Q Consensus 184 ~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv 245 (497)
.... ..+.... .+.+++ |+.++++++..|.+.|.+|..+
T Consensus 175 ~~~i------~~G~~~~--------------~~g~~v---G~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 175 NGLI------HIGMDHF--------------PGGRST---AEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp TCEE------EETTEEE--------------ECSSST---TSCCBCSHHHHHHHTTCCEEEE
T ss_pred Cccc------eeeeeee--------------cccccc---CCchhhhhHHHHHhCCceEEee
Confidence 5321 1111111 011221 4577889999999999988654
No 130
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.68 E-value=3.6e-08 Score=102.86 Aligned_cols=123 Identities=21% Similarity=0.304 Sum_probs=73.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCCc--------------------------ccc
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTK--------------------------GYL 110 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~-~l~~--------------------------~~l 110 (497)
++.+||+|||||+||+++|..|++.|+ +|+|||+.+....... .+.. .+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~---~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGH---DVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCC---CEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 446899999999999999999999998 8999999854322110 0000 000
Q ss_pred CCCCCCC--C----------CCCCCccccCCCCCCCCHhHHHHcCcEEEeCCcEEEEecC-C--CEEEEC-CC--cEEEe
Q 010917 111 FPLDKKP--A----------RLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIE-K--QTLITN-SG--KLLKY 172 (497)
Q Consensus 111 ~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~-~--~~v~~~-~g--~~i~~ 172 (497)
....... . ..+.........+...+.+.+.+.|++++.+++|+.+..+ . ..|++. +| .++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~A 177 (591)
T 3i3l_A 98 WGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVES 177 (591)
T ss_dssp CSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEE
T ss_pred ecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEc
Confidence 0000000 0 0000000000000011223345679999999999999864 2 256665 66 57999
Q ss_pred ccEEeccCCCC
Q 010917 173 GSLIVATGCTA 183 (497)
Q Consensus 173 d~lvlAtG~~~ 183 (497)
|.||.|+|...
T Consensus 178 dlVV~AdG~~S 188 (591)
T 3i3l_A 178 DFVIDAGGSGG 188 (591)
T ss_dssp SEEEECCGGGC
T ss_pred CEEEECCCCcc
Confidence 99999999764
No 131
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.68 E-value=4.6e-08 Score=95.26 Aligned_cols=118 Identities=17% Similarity=0.237 Sum_probs=70.6
Q ss_pred CcEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCC----CC-C---C----CccccCCCCC----------
Q 010917 61 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYE----RP-A---L----TKGYLFPLDK---------- 115 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~---~g~~~~~V~lie~~~~~~~~----~~-~---l----~~~~l~~~~~---------- 115 (497)
+||+|||||++|+++|+.|++ .|+ +|+|+|+++..... +. . . ...++.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~---~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 78 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL---YLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYD 78 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE---EEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc---eEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHH
Confidence 589999999999999999999 777 89999998643210 00 0 0 0000000000
Q ss_pred ------CCCCC----------CCCccccCCCCCCCCH-hHHHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEE
Q 010917 116 ------KPARL----------PGFHTCVGSGGERQTP-EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLI 176 (497)
Q Consensus 116 ------~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lv 176 (497)
....+ .....+........+. ...++.|++++++++|+++...+. +|++++|+.+.+|+||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 79 ELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEE
T ss_pred HHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEE
Confidence 00000 0000111111112222 223345899999999999987543 6777788778999999
Q ss_pred eccCC
Q 010917 177 VATGC 181 (497)
Q Consensus 177 lAtG~ 181 (497)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99974
No 132
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.67 E-value=7.6e-07 Score=89.72 Aligned_cols=58 Identities=24% Similarity=0.278 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHCCcEEEcCC---eEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGA---SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~---~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p 316 (497)
..+...+.+.+++.|+++++++ +|+++... ++.+.+|.+.+|+++.+|.||+|+|...
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 4677788888899999999999 99999864 5677779999998899999999999754
No 133
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.67 E-value=2.4e-08 Score=94.58 Aligned_cols=122 Identities=10% Similarity=0.106 Sum_probs=69.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCCCCCCCCCCCCccccCC----CC--------CCCCC-CCCCc
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAPYERPALTKGYLFP----LD--------KKPAR-LPGFH 124 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~~V~lie~~~~~~~~~~~l~~~~l~~----~~--------~~~~~-~~~~~ 124 (497)
.++||+|||||++|+++|..|+++ |. +|+|||+.+..... .....+.+.. .. ..+.. ...+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~---~V~viEk~~~~gg~-~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~ 113 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNV---QVAIIEQSVSPGGG-AWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYV 113 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTS---CEEEEESSSSCCTT-TTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCC---eEEEEECCCCCCCc-eecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEE
Confidence 357999999999999999999997 87 89999998654211 0000000000 00 00000 00000
Q ss_pred cc-cCCCCCCCCHhHHHH-cCcEEEeCCcEEEEecCCCEE---EEC---------CC-----cEEEeccEEeccCCCCC
Q 010917 125 TC-VGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQTL---ITN---------SG-----KLLKYGSLIVATGCTAS 184 (497)
Q Consensus 125 ~~-~~~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~v---~~~---------~g-----~~i~~d~lvlAtG~~~~ 184 (497)
.. ....+...+.+.+.+ .|++++.+++|+.+..+...+ .+. ++ ..+.+|.||+|||..+.
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 114 VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 00 000000011222333 589999999999998665432 331 22 57899999999997654
No 134
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.66 E-value=3.3e-08 Score=98.26 Aligned_cols=121 Identities=17% Similarity=0.210 Sum_probs=71.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---CCcccc----CCCC-CC-CCCC--------CC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---LTKGYL----FPLD-KK-PARL--------PG 122 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~---l~~~~l----~~~~-~~-~~~~--------~~ 122 (497)
++||+|||||+||+++|..|+++|+ +|+|+|+.+........ ++...+ .... .. ...+ .+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~---~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCC
Confidence 4799999999999999999999998 89999998743221100 000000 0000 00 0000 00
Q ss_pred Cc--cccCC-------------CCCCCCHhHHHHcCcEEEeCCcEEEEecCCCE---EEE---CCCcEEEeccEEeccCC
Q 010917 123 FH--TCVGS-------------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LIT---NSGKLLKYGSLIVATGC 181 (497)
Q Consensus 123 ~~--~~~~~-------------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~---~~g~~i~~d~lvlAtG~ 181 (497)
.. ..... .+...+.+.+.+.|++++.+++|+.+..++.. |.+ .++.++.+|.||.|+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 81 KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp SSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred CEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 00 00000 00011122344569999999999998876553 444 34567999999999997
Q ss_pred CC
Q 010917 182 TA 183 (497)
Q Consensus 182 ~~ 183 (497)
..
T Consensus 161 ~s 162 (397)
T 3cgv_A 161 ES 162 (397)
T ss_dssp TC
T ss_pred ch
Confidence 64
No 135
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.65 E-value=2.1e-07 Score=92.21 Aligned_cols=79 Identities=18% Similarity=0.400 Sum_probs=57.6
Q ss_pred CcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 240 LDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 240 ~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
..+.++.+....+. +..+...+.+.+++.|++++.+++|++++..+++ + .+.+.+| ++.+|.||+|+|...+ .
T Consensus 135 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~~-~ 207 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWNS-K 207 (389)
T ss_dssp TEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGHH-H
T ss_pred CceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccHH-H
Confidence 45667766654432 3467778888899999999999999999865443 3 4666665 7999999999998654 4
Q ss_pred chhhcC
Q 010917 320 PFERVG 325 (497)
Q Consensus 320 ~~~~~g 325 (497)
++..++
T Consensus 208 l~~~~g 213 (389)
T 2gf3_A 208 LLSKLN 213 (389)
T ss_dssp HGGGGT
T ss_pred Hhhhhc
Confidence 444444
No 136
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.64 E-value=2.8e-08 Score=98.30 Aligned_cols=37 Identities=16% Similarity=0.261 Sum_probs=33.3
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
...++||+|||||++|+++|+.|+++|+ +|+|||+..
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~---~V~llE~~~ 50 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENK---NTALFESGT 50 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCC
Confidence 3445899999999999999999999998 899999975
No 137
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.64 E-value=1.3e-07 Score=91.37 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=81.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhc------------------cCHHHHHHHHHHHHHCCcEEEcC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------FTPSLAQRYEQLYQQNGVKFVKG 278 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~------------------~~~~~~~~~~~~l~~~GV~i~~~ 278 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.... ...++...+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 579999999999999999999999999999986433111 13567778888888899999999
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccC---cCCC
Q 010917 279 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA---KPTV 318 (497)
Q Consensus 279 ~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~---~p~~ 318 (497)
++|.+++..+++. ..+.+.+|+ +.+|.||+|+|. .|..
T Consensus 88 ~~v~~i~~~~~~~-~~v~~~~g~-~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 88 QAVESVEKQADGV-FKLVTNEET-HYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp CCEEEEEECTTSC-EEEEESSEE-EEEEEEEECCTTSCCEECC
T ss_pred CEEEEEEECCCCc-EEEEECCCE-EEeCEEEECCCCCcCCCCC
Confidence 9999998764423 357777776 999999999999 6654
No 138
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.63 E-value=2e-07 Score=92.72 Aligned_cols=123 Identities=14% Similarity=0.170 Sum_probs=71.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC----CC--c--cccC-------------CCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA----LT--K--GYLF-------------PLDKKP 117 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~----l~--~--~~l~-------------~~~~~~ 117 (497)
+.+||+|||||++|+++|..|++.|+ +|+|+|+.+........ +. . ..+. +.....
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~ 101 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGI---DVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNI 101 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC---EEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEE
Confidence 45799999999999999999999998 89999998653211000 00 0 0000 000000
Q ss_pred CCCCCCcccc-------CCCCCC----CCHhHHHHc--CcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCC
Q 010917 118 ARLPGFHTCV-------GSGGER----QTPEWYKEK--GIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCT 182 (497)
Q Consensus 118 ~~~~~~~~~~-------~~~~~~----~~~~~~~~~--~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~ 182 (497)
....+..... ...... .+.+.+.+. +++++++++|+.++.+.. ++++.+|+++.+|.||.|+|..
T Consensus 102 ~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 102 ADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGM 181 (398)
T ss_dssp ECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTT
T ss_pred ECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcc
Confidence 0000000000 000000 011222221 357888999999976543 6778888889999999999986
Q ss_pred CC
Q 010917 183 AS 184 (497)
Q Consensus 183 ~~ 184 (497)
..
T Consensus 182 S~ 183 (398)
T 2xdo_A 182 SK 183 (398)
T ss_dssp CS
T ss_pred hh
Confidence 53
No 139
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.61 E-value=1.9e-08 Score=99.51 Aligned_cols=46 Identities=30% Similarity=0.338 Sum_probs=36.6
Q ss_pred hHHHHcCcEEEeCCcEEEEecCCCE---EEECCCcEEEeccEEeccCCCC
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTA 183 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~~g~~i~~d~lvlAtG~~~ 183 (497)
+.+++.|++++.+++|+++..+... +.+.+| ++.+|+||+|+|...
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 4456679999999999999866543 566666 799999999999764
No 140
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.61 E-value=5.4e-08 Score=100.88 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=33.9
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
..+++|+||||||+|+++|..|+++|+ +|+|||+.+..
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~---~v~viEr~~~~ 40 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGV---RVLVVERRPGL 40 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSSSC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 345799999999999999999999998 89999998643
No 141
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.60 E-value=3.2e-08 Score=101.49 Aligned_cols=123 Identities=15% Similarity=0.200 Sum_probs=73.2
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-C--------------CCCCccccCCCCCCC-CCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-R--------------PALTKGYLFPLDKKP-ARL 120 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-~--------------~~l~~~~l~~~~~~~-~~~ 120 (497)
..++++|+||||||+|+++|..|+++|+ +|+|||+.+..... + ..+...+... .... ..+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~ 83 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGV---EVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHF 83 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-cccccccc
Confidence 4556899999999999999999999998 89999998653211 0 0010000000 0000 000
Q ss_pred CCCc-ccc--C-----------CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCC--EEEECCCc---EEEeccEEeccCC
Q 010917 121 PGFH-TCV--G-----------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGC 181 (497)
Q Consensus 121 ~~~~-~~~--~-----------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~---~i~~d~lvlAtG~ 181 (497)
.+.. ... . ......+.+.+.+.|++++.+++|++++.+.. ++++.++. ++++|+||.|.|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~ 163 (500)
T 2qa1_A 84 GGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGG 163 (500)
T ss_dssp TTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCT
T ss_pred cceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCc
Confidence 0000 000 0 00000112234556999999999999976554 45555554 7999999999998
Q ss_pred CC
Q 010917 182 TA 183 (497)
Q Consensus 182 ~~ 183 (497)
..
T Consensus 164 ~S 165 (500)
T 2qa1_A 164 RS 165 (500)
T ss_dssp TC
T ss_pred ch
Confidence 64
No 142
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.59 E-value=1.8e-08 Score=100.02 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=33.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
++||+||||||||+++|..|+++|+ +|+|+|+.+..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~---~V~v~Er~~~~ 39 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 4899999999999999999999998 89999997654
No 143
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.59 E-value=5.8e-08 Score=98.49 Aligned_cols=98 Identities=17% Similarity=0.292 Sum_probs=75.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||++|+.+|..|++.|. +|+++++.+... |.. ...+ ...+.+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~---~V~lv~~~~~~l---~~~-----------~~~~-----------~~~l~~~l 218 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGA---EVIVLEYMDRIL---PTM-----------DLEV-----------SRAAERVF 218 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTS-----------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecCCccc---ccc-----------CHHH-----------HHHHHHHH
Confidence 4799999999999999999999987 899999886521 000 0000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~~ 185 (497)
++.|++++++++|.+++.+.. .+.+++++++.+|.||+|+|..|..
T Consensus 219 ~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 219 KKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 888999999999999987654 3555678889999999999988763
No 144
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.59 E-value=4.7e-08 Score=100.73 Aligned_cols=123 Identities=18% Similarity=0.283 Sum_probs=72.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCCc----ccc-----------------------
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTK----GYL----------------------- 110 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~-~l~~----~~l----------------------- 110 (497)
.++||+|||||++|+++|..|+++|+ +|+|||+.+...+... .+.. .++
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~---~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGH---RVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCC---CEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEE
Confidence 34799999999999999999999988 8999999863221110 0000 000
Q ss_pred CCCCCCC--CCCC-------CCccccC-CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCE---EE--ECCCc--EEEec
Q 010917 111 FPLDKKP--ARLP-------GFHTCVG-SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LI--TNSGK--LLKYG 173 (497)
Q Consensus 111 ~~~~~~~--~~~~-------~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~--~~~g~--~i~~d 173 (497)
....... ..+. ....... ..+...+.+.+.+.|++++.+++|+.+..+... +. ..+|+ ++.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad 162 (512)
T 3e1t_A 83 WGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHAR 162 (512)
T ss_dssp CSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEE
T ss_pred ecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcC
Confidence 0000000 0000 0000000 000001223345579999999999999876653 33 34563 79999
Q ss_pred cEEeccCCCCC
Q 010917 174 SLIVATGCTAS 184 (497)
Q Consensus 174 ~lvlAtG~~~~ 184 (497)
.||.|+|....
T Consensus 163 ~VI~AdG~~S~ 173 (512)
T 3e1t_A 163 FIVDASGNRTR 173 (512)
T ss_dssp EEEECCCTTCS
T ss_pred EEEECCCcchH
Confidence 99999998654
No 145
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.59 E-value=8.1e-08 Score=96.38 Aligned_cols=56 Identities=13% Similarity=0.269 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcC
Q 010917 257 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 257 ~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p 316 (497)
...+.+.+.+.+++.|+++++++.|++|+.. ++.+ | ..+|+++.+|.||+|+|...
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHH
Confidence 3567888889999999999999999999854 4554 4 56788999999999999754
No 146
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.58 E-value=7.1e-08 Score=100.75 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=33.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
..+||||||||+||++||..|+++|+ +|+|+|+.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~---~V~vlEk~~~~ 161 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGA---KVILIEKEPVI 161 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 35799999999999999999999998 89999998753
No 147
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.57 E-value=3.7e-08 Score=98.38 Aligned_cols=125 Identities=13% Similarity=0.056 Sum_probs=70.8
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---------------CCCcc------------c
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------------ALTKG------------Y 109 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~---------------~l~~~------------~ 109 (497)
..+++||+|||||++|+++|..|+++|+ +|+|+|+.+....... .+... +
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~---~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 96 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGI---DCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAY 96 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEE
Confidence 3456899999999999999999999998 8999999864311000 00000 0
Q ss_pred cCCC-CCCCCCCCCCc--cccCCCCC----CCCHhHHHH--cCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEec
Q 010917 110 LFPL-DKKPARLPGFH--TCVGSGGE----RQTPEWYKE--KGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVA 178 (497)
Q Consensus 110 l~~~-~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlA 178 (497)
.... ......++... ...+.... ..+...+.+ ..++++++++|+.++.+.. ++++.+|+++.+|.||.|
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~A 176 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAA 176 (407)
T ss_dssp EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEEC
T ss_pred EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEEC
Confidence 0000 00000000000 00000000 001112211 1278899999999987654 567788989999999999
Q ss_pred cCCCCC
Q 010917 179 TGCTAS 184 (497)
Q Consensus 179 tG~~~~ 184 (497)
+|....
T Consensus 177 dG~~S~ 182 (407)
T 3rp8_A 177 DGSHSA 182 (407)
T ss_dssp CCTTCS
T ss_pred CCcChH
Confidence 997643
No 148
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.56 E-value=2.5e-07 Score=89.58 Aligned_cols=102 Identities=15% Similarity=0.203 Sum_probs=79.8
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC----cc----------------hhhccCHHHHHHHHHHHHHCCcE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN----HL----------------LQRLFTPSLAQRYEQLYQQNGVK 274 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~----~~----------------~~~~~~~~~~~~~~~~l~~~GV~ 274 (497)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ .......++...+.+.+++.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 35689999999999999999999999999999843 11 11012357788888999999999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEe---CCCcEEEcCEEEEeccCcCCCc
Q 010917 275 FVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 275 i~~~~~v~~i~~~~~~~v~~v~~---~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
++.++ +.+++.. ++.+ .+.+ .++.++.+|.+|+|+|..|...
T Consensus 101 i~~~~-v~~i~~~-~~~~-~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 101 IITET-VSKVDLS-SKPF-KLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp EECSC-EEEEECS-SSSE-EEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEEeE-EEEEEEc-CCEE-EEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 99998 9999864 3333 3455 4677899999999999987643
No 149
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.56 E-value=1.1e-07 Score=94.15 Aligned_cols=102 Identities=24% Similarity=0.401 Sum_probs=78.4
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh-h-ccCH---------HHHHHHHHHHHHCCcEEEcCCeEEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-R-LFTP---------SLAQRYEQLYQQNGVKFVKGASIKN 283 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-~-~~~~---------~~~~~~~~~l~~~GV~i~~~~~v~~ 283 (497)
+..+|+|||+|+.|+.+|..|...+.+|+++++.+.+.- + .++. ++.....+.+++.||+++.+++|++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 345799999999999999999888899999998875321 1 1111 1112245667889999999999999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcc
Q 010917 284 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP 320 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~ 320 (497)
++.. .+ .|.+.+|+++.+|.+|+|+|.+|....
T Consensus 88 id~~--~~--~v~~~~g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 88 IDPN--NK--LVTLKSGEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp EETT--TT--EEEETTSCEEECSEEEECCCEEECCCC
T ss_pred EECC--CC--EEEECCCCEEECCEEEEecCCCcCCCC
Confidence 9854 22 577899999999999999999887543
No 150
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.55 E-value=5.8e-08 Score=101.29 Aligned_cols=37 Identities=24% Similarity=0.420 Sum_probs=33.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
..+||||||||+||++||..|+++|. +|+|||+.+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~---~V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGA---NVILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTC---CEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 45799999999999999999999998 89999998753
No 151
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.55 E-value=3.4e-07 Score=91.37 Aligned_cols=99 Identities=22% Similarity=0.282 Sum_probs=78.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhc----------------------------------------
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL---------------------------------------- 255 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~---------------------------------------- 255 (497)
..+|+|||+|..|+.+|..|++.|.+|+|+++.+.+....
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 4589999999999999999999999999999876532110
Q ss_pred -----------------------cCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEec
Q 010917 256 -----------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGI 312 (497)
Q Consensus 256 -----------------------~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~ 312 (497)
....+.+.+.+.+++.||+++++++|+++...++ . ..|.+.+| ++.+|.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-~-~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-G-FRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-E-EEEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-E-EEEEECCc-EEEeeEEEECC
Confidence 0124566777888889999999999999986533 3 35777777 89999999999
Q ss_pred cCcCC
Q 010917 313 GAKPT 317 (497)
Q Consensus 313 G~~p~ 317 (497)
|..+.
T Consensus 184 G~~S~ 188 (417)
T 3v76_A 184 GGKSI 188 (417)
T ss_dssp CCSSC
T ss_pred CCccC
Confidence 98763
No 152
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.55 E-value=4e-08 Score=100.69 Aligned_cols=122 Identities=16% Similarity=0.219 Sum_probs=72.9
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-C--------------CCCCccccCCCCCCC-CCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-R--------------PALTKGYLFPLDKKP-ARLP 121 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~-~--------------~~l~~~~l~~~~~~~-~~~~ 121 (497)
.++++|+||||||+|+++|..|+++|+ +|+|||+.+..... + ..+...+... .... ..+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~~ 85 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGV---DVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV-ETSTQGHFG 85 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC-CEESEEEET
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc-cccccceec
Confidence 456899999999999999999999998 89999998653211 0 0000000000 0000 0000
Q ss_pred CC--c--cccCC----------CCCCCCHhHHHHcCcEEEeCCcEEEEecCCC--EEEECCCc---EEEeccEEeccCCC
Q 010917 122 GF--H--TCVGS----------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGCT 182 (497)
Q Consensus 122 ~~--~--~~~~~----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~---~i~~d~lvlAtG~~ 182 (497)
+. . ..... .....+.+.+.+.|++++.+++|++++.+.. ++++.++. ++++|+||.|.|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 86 GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 00 0 00000 0001112334556999999999999976543 56666664 79999999999986
Q ss_pred C
Q 010917 183 A 183 (497)
Q Consensus 183 ~ 183 (497)
.
T Consensus 166 S 166 (499)
T 2qa2_A 166 S 166 (499)
T ss_dssp C
T ss_pred c
Confidence 4
No 153
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.54 E-value=1.9e-07 Score=97.54 Aligned_cols=37 Identities=38% Similarity=0.553 Sum_probs=33.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc------CCCCCcEEEEcCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAYA 98 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~------g~~~~~V~lie~~~~~ 98 (497)
+.+||+|||||+||+++|..|++. |+ +|+|||+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~---~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDL---RVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCC---CEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCC---cEEEEeCCCCC
Confidence 358999999999999999999998 87 89999998654
No 154
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.54 E-value=6.6e-07 Score=87.66 Aligned_cols=99 Identities=15% Similarity=0.196 Sum_probs=80.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh------------------ccCHHHHHHHHHHHHHCCcEEEc
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------LFTPSLAQRYEQLYQQNGVKFVK 277 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------~~~~~~~~~~~~~l~~~GV~i~~ 277 (497)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.|++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 458999999999999999999999999999987643110 01256677788888888999999
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 278 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 278 ~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
+++|++++..+++. ..+.+.+|+++.+|.||+|+|..
T Consensus 94 ~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCC
Confidence 99999998754433 35778888899999999999994
No 155
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.54 E-value=1.1e-07 Score=95.87 Aligned_cols=101 Identities=22% Similarity=0.318 Sum_probs=78.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHh---CCCcEEEEecCCcchhhc----------cCHHHHHHHHHHHHHCCcEEEcCCeEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------FTPSLAQRYEQLYQQNGVKFVKGASIKN 283 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~~~~~~~----------~~~~~~~~~~~~l~~~GV~i~~~~~v~~ 283 (497)
++|+|||||+.|+.+|..|++ .|.+|+|+++.+.+.... ...++...+.+.+++.||+++. .++++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 899999999987652111 1122333356777889999985 58999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchh
Q 010917 284 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE 322 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~ 322 (497)
++.. +. .|.+.+|+++.+|.+|+|+|.+|+...+.
T Consensus 84 id~~-~~---~V~~~~g~~i~~d~lviAtG~~~~~~~ip 118 (437)
T 3sx6_A 84 IDAE-AQ---NITLADGNTVHYDYLMIATGPKLAFENVP 118 (437)
T ss_dssp EETT-TT---EEEETTSCEEECSEEEECCCCEECGGGST
T ss_pred EEcC-CC---EEEECCCCEEECCEEEECCCCCcCcccCC
Confidence 9853 22 57788998999999999999998754443
No 156
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.53 E-value=2.1e-08 Score=101.71 Aligned_cols=122 Identities=17% Similarity=0.251 Sum_probs=71.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-CCCC---CCcccc--CC-CCCC---------------C
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-ERPA---LTKGYL--FP-LDKK---------------P 117 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~-~~~~---l~~~~l--~~-~~~~---------------~ 117 (497)
++||+||||||||+++|..|++.|+ +|+|+|+.+.... .... +....+ .. .... +
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~---~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 82 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGL---KILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSP 82 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSC---CEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECC
Confidence 5799999999999999999999998 8999999864211 0000 000000 00 0000 0
Q ss_pred -----CCCCCCccccC-CCCCCCCHhHHHHcCcEEEeCCcEEEEecCCCE---EEEC---CCc--EEEeccEEeccCCCC
Q 010917 118 -----ARLPGFHTCVG-SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITN---SGK--LLKYGSLIVATGCTA 183 (497)
Q Consensus 118 -----~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~---~g~--~i~~d~lvlAtG~~~ 183 (497)
..+++...... ..+...+.+.+.+.|++++.+++|+++..++.. +++. +|+ ++.+|.||.|+|...
T Consensus 83 ~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 83 DMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 00000000000 000011122334579999999999998766554 3443 565 789999999999765
Q ss_pred C
Q 010917 184 S 184 (497)
Q Consensus 184 ~ 184 (497)
.
T Consensus 163 ~ 163 (453)
T 3atr_A 163 S 163 (453)
T ss_dssp T
T ss_pred h
Confidence 3
No 157
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.53 E-value=9.8e-08 Score=94.21 Aligned_cols=64 Identities=17% Similarity=0.132 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 325 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~g 325 (497)
..+...+.+.+++.|+++++++.|++++..++ . ..|.+.+| ++.+|.||+|+|.... .++..++
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g 217 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAWCD-AIAGLAG 217 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGGHH-HHHHHHT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChhHH-HHHHHhC
Confidence 46777788888999999999999999986533 3 46777777 7999999999997543 3444433
No 158
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.52 E-value=6.6e-07 Score=88.35 Aligned_cols=97 Identities=21% Similarity=0.244 Sum_probs=79.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh-----------------------------------------
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 254 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 254 (497)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred --cc-----------CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 255 --LF-----------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 255 --~~-----------~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
.+ ...+.+.+.+.+++.|++++.+++|++++. ++ .+++.+|+++.+|.||.|.|..+.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHH
Confidence 00 034567777888889999999999999985 34 567888989999999999998764
No 159
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.52 E-value=5.9e-07 Score=86.96 Aligned_cols=97 Identities=18% Similarity=0.229 Sum_probs=78.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh------------------ccCHHHHHHHHHHHHHCCcEEEcC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------LFTPSLAQRYEQLYQQNGVKFVKG 278 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------~~~~~~~~~~~~~l~~~GV~i~~~ 278 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.+++++.+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 57999999999999999999999999999987644211 012456677777788889999999
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 279 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 279 ~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
++|.+++..++ ...+.+.+|+++.+|.||+|+|..
T Consensus 86 ~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 99999986533 235777888889999999999984
No 160
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.52 E-value=5.2e-07 Score=86.65 Aligned_cols=100 Identities=20% Similarity=0.297 Sum_probs=79.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC--Ccch--------hh---ccCHHHHHHHHHHHHHCCcEEEcCCeEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE--NHLL--------QR---LFTPSLAQRYEQLYQQNGVKFVKGASIKN 283 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~--~~~~--------~~---~~~~~~~~~~~~~l~~~GV~i~~~~~v~~ 283 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+. +. ....++...+.+.+++.|++++. .++.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 58999999999999999999999999999985 1111 11 12356777888888899999999 88999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 284 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
++..++ . ..+.+.+|+++.+|.+|+|+|..|...
T Consensus 95 i~~~~~-~-~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENRGD-E-FVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC---C-EEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEecCC-E-EEEEECCCCEEEcCEEEECcCCCCccC
Confidence 986532 2 357788888999999999999987654
No 161
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.51 E-value=5.8e-07 Score=92.85 Aligned_cols=102 Identities=17% Similarity=0.193 Sum_probs=82.1
Q ss_pred CeEEEEcCCHHHHHHHHHHH-hCCCcEEEEecCCcchhh------------------------------------ccCHH
Q 010917 217 KKVVVVGGGYIGMEVAAAAV-GWKLDTTIIFPENHLLQR------------------------------------LFTPS 259 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~-~~g~~Vtlv~~~~~~~~~------------------------------------~~~~~ 259 (497)
.+|+|||+|+.|+.+|..|+ +.|.+|+|+++.+.+... ...++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 999999999986533110 01235
Q ss_pred HHHHHHHHHHHCCc--EEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccC--cCCC
Q 010917 260 LAQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA--KPTV 318 (497)
Q Consensus 260 ~~~~~~~~l~~~GV--~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~--~p~~ 318 (497)
+..++.+..++.|+ +++++++|++++..+++....|.+.+|+++.+|.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 67778888888898 89999999999876554455788899999999999999994 5543
No 162
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.51 E-value=4.9e-07 Score=93.58 Aligned_cols=103 Identities=16% Similarity=0.199 Sum_probs=82.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh------------------------------------ccCHH
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------LFTPS 259 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------~~~~~ 259 (497)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+... .-.++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 357999999999999999999999999999986533210 01246
Q ss_pred HHHHHHHHHHHCCc--EEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEecc--CcCCC
Q 010917 260 LAQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTV 318 (497)
Q Consensus 260 ~~~~~~~~l~~~GV--~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G--~~p~~ 318 (497)
+..++.+..++.|+ +++++++|++++..++.....|.+.+|+++.+|.||+|+| .+|..
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 77788888889998 8999999999987655545578889999999999999999 55553
No 163
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.50 E-value=2.2e-07 Score=92.76 Aligned_cols=96 Identities=20% Similarity=0.343 Sum_probs=75.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+... .. .+ ...+ ...+.+.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l------~~-~~------~~~~-----------~~~l~~~l 197 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGV---HVSLVETQPRLM------SR-AA------PATL-----------ADFVARYH 197 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS------TT-TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeCCccc------cc-cc------CHHH-----------HHHHHHHH
Confidence 5899999999999999999999987 899999886421 00 00 0000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCC
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
++.||+++++++|.+++ ++ .+.+++|+++.+|.||+|+|..|.
T Consensus 198 ~~~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 198 AAQGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHTTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHcCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCcc
Confidence 88999999999999998 44 888899989999999999998765
No 164
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.50 E-value=6.4e-07 Score=85.67 Aligned_cols=101 Identities=20% Similarity=0.268 Sum_probs=78.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC--cch---------h--hccCHHHHHHHHHHHHHCCcEEEcCCeEEEE
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL---------Q--RLFTPSLAQRYEQLYQQNGVKFVKGASIKNL 284 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~--~~~---------~--~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i 284 (497)
+|+|||+|+.|+.+|..|++.|.+|+++++.. .+. . ....+.+...+.+.+++.|++++.++++..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999997531 111 0 0112467778888888999999999999999
Q ss_pred EeCCC-CcEEEEEeCCCcEEEcCEEEEeccCcCCC
Q 010917 285 EAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 318 (497)
Q Consensus 285 ~~~~~-~~v~~v~~~~g~~i~~D~vv~a~G~~p~~ 318 (497)
+...+ +....+.+.+|+++.+|.+|+|+|..|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22345778888889999999999998764
No 165
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.49 E-value=5.7e-07 Score=85.30 Aligned_cols=100 Identities=12% Similarity=0.255 Sum_probs=77.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch---------hh---ccCHHHHHHHHHHHHHC-CcEEEcCCeEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL---------QR---LFTPSLAQRYEQLYQQN-GVKFVKGASIKN 283 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------~~---~~~~~~~~~~~~~l~~~-GV~i~~~~~v~~ 283 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+... +. ....++...+.+.+++. +++++.+ ++++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 479999999999999999999999999999753211 00 11235667777777776 7888765 8999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 284 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
++..+++ ..+.+.+|+++.+|.||+|+|..|...
T Consensus 82 i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFGE--FIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 9865333 357888999999999999999987643
No 166
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.49 E-value=1.6e-07 Score=93.38 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=72.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC---CCCCCC-CCc-------------ccc-----------C
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA---PYERPA-LTK-------------GYL-----------F 111 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~---~~~~~~-l~~-------------~~l-----------~ 111 (497)
++||+|||||++|+++|..|++.|+ +|+|+|+.+.. .-.+.. +.. .+. .
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI---DNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 3799999999999999999999998 89999997631 000000 000 000 0
Q ss_pred CCCC-CCCCCC----CCcc-c-cCCCCCCCCHhHHHHcCcEEEeCCcEEEEecCC---CEEEE-CCCc--EEEeccEEec
Q 010917 112 PLDK-KPARLP----GFHT-C-VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEK---QTLIT-NSGK--LLKYGSLIVA 178 (497)
Q Consensus 112 ~~~~-~~~~~~----~~~~-~-~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~---~~v~~-~~g~--~i~~d~lvlA 178 (497)
.... ....+. +... . ........+.+.+.+.|++++.+++|+++..+. ..+++ ++|+ ++.+|.||.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 0000 000000 0000 0 000000112233445699999999999997642 46776 6776 7999999999
Q ss_pred cCCCCC
Q 010917 179 TGCTAS 184 (497)
Q Consensus 179 tG~~~~ 184 (497)
+|....
T Consensus 159 dG~~S~ 164 (394)
T 1k0i_A 159 DGFHGI 164 (394)
T ss_dssp CCTTCS
T ss_pred CCCCcH
Confidence 998654
No 167
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.49 E-value=2.1e-07 Score=91.53 Aligned_cols=35 Identities=14% Similarity=0.316 Sum_probs=32.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
++||+|||||++|+++|++|+++|+ +|+|+|+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~---~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGL---NVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTC---CEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCC
Confidence 4699999999999999999999998 8999999754
No 168
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.46 E-value=2.7e-07 Score=91.32 Aligned_cols=98 Identities=13% Similarity=0.174 Sum_probs=75.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++++|||||+.|+.+|..|++.|. +|+++++.+...-. .+ ...+ ...+.+.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~~-------~~------~~~~-----------~~~l~~~l 197 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGY---QLDVVAPCEQVMPG-------LL------HPAA-----------AKAVQAGL 197 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSSTT-------TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCcchhhc-------cc------CHHH-----------HHHHHHHH
Confidence 5899999999999999999999987 89999987642100 00 0000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCC
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
++.|++++++++|.+++.+.. .+.+.+|+++.+|.||+|+|..|.
T Consensus 198 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 198 EGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 788999999999999976543 577788888999999999998775
No 169
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.45 E-value=1.3e-06 Score=86.80 Aligned_cols=99 Identities=11% Similarity=0.204 Sum_probs=77.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh--------------------hc---------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ--------------------RL--------------------- 255 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--------------------~~--------------------- 255 (497)
.+|+|||+|..|+.+|..|++.|.+|+++++.+.+.. ..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4699999999999999999999999999998764310 00
Q ss_pred ----------------------cCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCC---CCcEEEEEeCCCcEEEcCEEEE
Q 010917 256 ----------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS---DGRVAAVKLEDGSTIDADTIVI 310 (497)
Q Consensus 256 ----------------------~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~---~~~v~~v~~~~g~~i~~D~vv~ 310 (497)
....+.+.+.+.+++.||++++++.++++..++ ++.+ .+.+.++ ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEE
Confidence 123455667788888999999999999998541 2333 5677766 799999999
Q ss_pred eccCcCC
Q 010917 311 GIGAKPT 317 (497)
Q Consensus 311 a~G~~p~ 317 (497)
|+|..+.
T Consensus 163 AtG~~s~ 169 (401)
T 2gqf_A 163 ATGGLSM 169 (401)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9999874
No 170
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.45 E-value=2.5e-07 Score=93.00 Aligned_cols=96 Identities=24% Similarity=0.353 Sum_probs=72.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCcchhhccCHH----------HHHHHHHHHHHCCcEEEcCCeEEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTPS----------LAQRYEQLYQQNGVKFVKGASIKNL 284 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~~~~~~~~----------~~~~~~~~l~~~GV~i~~~~~v~~i 284 (497)
|+|+|||+|+.|+.+|..|++++ .+||||++.+.+.-...-+. +...+.+.+++.||+++.+ ++++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999876 68999999876432111111 1112344567789999877 69999
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 285 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 285 ~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
+.. ++ .|++++|+++++|.+|+|+|.++.
T Consensus 82 d~~--~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DPD--AN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ETT--TT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred ECC--CC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 853 22 578899999999999999998753
No 171
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.45 E-value=2.8e-07 Score=93.30 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=76.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+|+++.+... +.+. ..+ ...+.+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l 218 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGA---KTHLFEMFDAPL---PSFD-----------PMI-----------SETLVEVM 218 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC---EEEEEEeCCchh---hhhh-----------HHH-----------HHHHHHHH
Confidence 5799999999999999999999987 899999876421 0000 000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCC---CEEEECCCcEEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~---~~v~~~~g~~i~~d~lvlAtG~~~~~ 185 (497)
++.|++++++++|.+++.+. ..+.+++|+++.+|.||+|+|..|..
T Consensus 219 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 219 NAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp HHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 88899999999999998653 36788888889999999999988763
No 172
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.44 E-value=2.8e-07 Score=93.60 Aligned_cols=98 Identities=21% Similarity=0.277 Sum_probs=76.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ ...+.+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l 217 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGS---EVTVVALEDRLL---FQFD-----------PLL-----------SATLAENM 217 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCCccc---cccC-----------HHH-----------HHHHHHHH
Confidence 4799999999999999999999987 899999875421 0000 000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCC--CEEEECCCc-EEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEK--QTLITNSGK-LLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~-~i~~d~lvlAtG~~~~~ 185 (497)
++.|++++++++|.+++.+. ..+.+++|+ ++.+|.||+|+|..|..
T Consensus 218 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 218 HAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 88999999999999998643 467788888 89999999999988763
No 173
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.44 E-value=3.8e-07 Score=91.53 Aligned_cols=57 Identities=19% Similarity=0.370 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p 316 (497)
..+.+.+.+.++++|+++++++.|++|... ++++..|.++ |+++.+|.||+|+|...
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHH
Confidence 457788889999999999999999999865 5666667765 77899999999998643
No 174
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.43 E-value=5.1e-07 Score=90.89 Aligned_cols=95 Identities=16% Similarity=0.283 Sum_probs=76.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++++|||||+.|+.+|..+++.|. +|||+++.+... .... .++ .....+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~ll-----------~~~d---~~~-----------~~~~~~~l 198 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGL---HPTLIHRSDKIN-----------KLMD---ADM-----------NQPILDEL 198 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC---EEEEEESSSCCS-----------TTSC---GGG-----------GHHHHHHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCC---cceeeeeecccc-----------cccc---chh-----------HHHHHHHh
Confidence 4689999999999999999999987 899999876431 0000 001 13456778
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCC
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
++.||+++++++|..++. ..+.+++|+.+++|.+++|+|..|.
T Consensus 199 ~~~gV~i~~~~~v~~~~~--~~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 199 DKREIPYRLNEEINAING--NEITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp HHTTCCEEESCCEEEEET--TEEEETTSCEEECSEEEECCCEEES
T ss_pred hccceEEEeccEEEEecC--CeeeecCCeEEeeeeEEEEeceecC
Confidence 889999999999998874 5788999999999999999998875
No 175
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=3.1e-07 Score=90.27 Aligned_cols=92 Identities=22% Similarity=0.332 Sum_probs=73.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 140 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (497)
++++|||||+.|+.+|..|++.|. +|+++++.+... + +. ..+ ...+.+.++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~-~~-----------~~~-----------~~~l~~~l~ 194 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGY---HVKLIHRGAMFL---G-LD-----------EEL-----------SNMIKDMLE 194 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTC---EEEEECSSSCCT---T-CC-----------HHH-----------HHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCCeec---c-CC-----------HHH-----------HHHHHHHHH
Confidence 799999999999999999999987 899999876421 0 00 000 123456778
Q ss_pred HcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCC
Q 010917 141 EKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 141 ~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+.||++++++++.+++ ...+.+++|+ +.+|.||+|+|..|.
T Consensus 195 ~~gV~i~~~~~v~~i~--~~~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 195 ETGVKFFLNSELLEAN--EEGVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp HTTEEEECSCCEEEEC--SSEEEETTEE-EECSCEEEECCEEEC
T ss_pred HCCCEEEcCCEEEEEE--eeEEEECCCE-EEcCEEEECcCCCcC
Confidence 8999999999999988 3468888888 999999999998765
No 176
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.43 E-value=8.6e-07 Score=92.39 Aligned_cols=141 Identities=15% Similarity=0.169 Sum_probs=92.8
Q ss_pred eccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhc----cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch
Q 010917 177 VATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE----KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 252 (497)
Q Consensus 177 lAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~----~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 252 (497)
.++.+.......+|....++........+...+...+. ..-.|+|||+|..|+.+|..|++.|.+|+|+++.+.+.
T Consensus 78 ~c~~ch~~~~~~~p~~~~~~~~~w~~~~~~~~i~~~i~~~~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~g 157 (566)
T 1qo8_A 78 YCNECHSFDIKPMPFSDAKKKKSWDDGWDQDKIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSG 157 (566)
T ss_dssp GGGGTCCCCCCCCTTTTSCCCCCSCCCCCHHHHHHHHHTCCSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred hhhhhcCCCcCCCCCCCCCCCcccccccccHHHHHhhccCCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 35555544312234444444444443233333322222 23479999999999999999999999999999875321
Q ss_pred hh------------------------------------------------------------------------------
Q 010917 253 QR------------------------------------------------------------------------------ 254 (497)
Q Consensus 253 ~~------------------------------------------------------------------------------ 254 (497)
..
T Consensus 158 g~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~ 237 (566)
T 1qo8_A 158 GNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVD 237 (566)
T ss_dssp TTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSC
T ss_pred CcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCC
Confidence 10
Q ss_pred ---------ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEeccCcCC
Q 010917 255 ---------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 317 (497)
Q Consensus 255 ---------~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~~D~vv~a~G~~p~ 317 (497)
.....+...+.+.+++.||++++++.++++...+++++.+|.+. +|+ ++.+|.||+|+|....
T Consensus 238 r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 238 RTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp CEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred ceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 00123445566777889999999999999986533777666664 675 6899999999997553
No 177
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=2e-07 Score=94.53 Aligned_cols=97 Identities=22% Similarity=0.306 Sum_probs=73.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||++|+.+|..|++.|. +|+|+++.+... +.+ ...+ ...+.+.
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~ 221 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGA---QVSVVEARERIL---PTY-----------DSEL-----------TAPVAES 221 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTS-----------CHHH-----------HHHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEEcCCccc---ccc-----------CHHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999986531 000 0000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEEC--CC--cEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITN--SG--KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~--~g--~~i~~d~lvlAtG~~~~~ 185 (497)
+++.||+++++++|.+++. +. +.+. +| .++.+|.||+|+|..|..
T Consensus 222 l~~~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 222 LKKLGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred HHHCCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCC
Confidence 7888999999999999987 43 4333 55 579999999999988763
No 178
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.42 E-value=1.1e-06 Score=84.06 Aligned_cols=99 Identities=16% Similarity=0.312 Sum_probs=76.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCc---c--------hhh----ccCHHHHHHHHHHHHHCCcEEEcCCeE
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH---L--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGASI 281 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~---~--------~~~----~~~~~~~~~~~~~l~~~GV~i~~~~~v 281 (497)
+|+|||+|+.|+.+|..|++.|. +|+++++... + .+. ....++...+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 69999999999999999999999 9999997521 0 111 11246677778888889999998 788
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 282 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 282 ~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
.+++..+ +. ..+.+.+|+++.+|.||+|+|..|...
T Consensus 82 ~~i~~~~-~~-~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 82 QRVSKKD-SH-FVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp EEEEEET-TE-EEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEcC-CE-EEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 8887643 32 246678888999999999999887643
No 179
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.42 E-value=3.4e-07 Score=91.17 Aligned_cols=101 Identities=22% Similarity=0.283 Sum_probs=73.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCcchhhccCHHHH---------HHHHHHHHHCCcEEEcCCeEEEE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTPSLA---------QRYEQLYQQNGVKFVKGASIKNL 284 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~~~~~~~~~~---------~~~~~~l~~~GV~i~~~~~v~~i 284 (497)
+|+|+|||+|+.|+.+|..|++.+ .+|+||++.+..........+. ..-.+.+.+.||+++.+ ++++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 799999999999999999998766 5899999887532211111110 01123456789999876 68899
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcch
Q 010917 285 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 321 (497)
Q Consensus 285 ~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~ 321 (497)
+.. .+ .+.+.+|+++.+|.+|+|+|.+++....
T Consensus 81 d~~--~~--~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 81 DPD--KK--LVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp ETT--TT--EEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred Ecc--Cc--EEEecccceeecceeeeccCCccccCCc
Confidence 853 22 4778999999999999999998875433
No 180
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.42 E-value=3e-07 Score=93.49 Aligned_cols=98 Identities=12% Similarity=0.216 Sum_probs=74.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+|+++.+... +.. ...+ ...+.+.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~l 220 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGA---EVTLIEYMPEIL---PQG-----------DPET-----------AALLRRAL 220 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTS-----------CHHH-----------HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---eEEEEEcCCccc---ccc-----------CHHH-----------HHHHHHHH
Confidence 4799999999999999999999987 899999876421 000 0000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCCC--EEEEC-C--Cc--EEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ--TLITN-S--GK--LLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~--~v~~~-~--g~--~i~~d~lvlAtG~~~~~ 185 (497)
++.||+++++++|.+++.+.. .+.+. + |+ ++.+|.||+|+|..|..
T Consensus 221 ~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 221 EKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred HhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 888999999999999986553 35554 5 66 79999999999988763
No 181
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.42 E-value=1.2e-06 Score=84.46 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=77.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc---c--------hhhc----cCHHHHHHHHHHHHHCCcEEEcCCeE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQRL----FTPSLAQRYEQLYQQNGVKFVKGASI 281 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------~~~~----~~~~~~~~~~~~l~~~GV~i~~~~~v 281 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++... + .+.. ...++...+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 5799999999999999999999999999998721 0 0110 1246677778888899999998 578
Q ss_pred EEEEeC--CCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 282 KNLEAG--SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 282 ~~i~~~--~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
.+++.. ++. ...+.+.+|+++.+|.||+|+|..|...
T Consensus 88 ~~i~~~~~~~~-~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 88 QGVQHDATSHP-YPFTVRGYNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp EEEEECTTSSS-CCEEEEESSCEEEEEEEEECCCEEECCC
T ss_pred EEEEeccCCCc-eEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 888764 222 1245667888999999999999987643
No 182
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.41 E-value=1.7e-06 Score=87.32 Aligned_cols=99 Identities=25% Similarity=0.437 Sum_probs=79.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh------------------------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------ 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 254 (497)
.+|+|||+|..|+.+|..|++.|.+|+|+++.+.+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 47999999999999999999999999999987532100
Q ss_pred -------------------cc-----CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEE
Q 010917 255 -------------------LF-----TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 310 (497)
Q Consensus 255 -------------------~~-----~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~ 310 (497)
.+ ...+.+.+.+.+++.||+++++++|+++... ++.+..|.+.+|+++.+|.||+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEE
Confidence 00 1234456677778899999999999999864 5666678888888899999999
Q ss_pred eccCcC
Q 010917 311 GIGAKP 316 (497)
Q Consensus 311 a~G~~p 316 (497)
|+|..+
T Consensus 186 AtGg~s 191 (447)
T 2i0z_A 186 AVGGKS 191 (447)
T ss_dssp CCCCSS
T ss_pred CCCCCc
Confidence 999876
No 183
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.41 E-value=2e-06 Score=84.42 Aligned_cols=97 Identities=16% Similarity=0.252 Sum_probs=75.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCcchh---------------------h--------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQ---------------------R-------------------- 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~~~---------------------~-------------------- 254 (497)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ +.. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 83 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEE 83 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccccc
Confidence 479999999999999999999999 999999875 100 0
Q ss_pred -ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 255 -LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 255 -~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
.....+..++.+.+++.|++++.++.|.+++..+++. .|.+.++ ++.+|.||+|+|..+.
T Consensus 84 ~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~--~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 84 HISGETYAEYLQVVANHYELNIFENTVVTNISADDAYY--TIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSE--EEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeE--EEEeCCC-EEEeCEEEECCCCCCc
Confidence 0013455667777788999999999999998653332 4666666 5999999999999754
No 184
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.40 E-value=7.8e-07 Score=91.97 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=79.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh-------------------------h-----------ccCHHH
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-------------------------R-----------LFTPSL 260 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------~-----------~~~~~~ 260 (497)
.+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.. . .-.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 4799999999999999999999999999998754310 0 012567
Q ss_pred HHHHHHHHHHCCc--EEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEecc--CcCCC
Q 010917 261 AQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTV 318 (497)
Q Consensus 261 ~~~~~~~l~~~GV--~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G--~~p~~ 318 (497)
..++.+..++.|+ .+.++++|++++.++++....|.+.+|+++.+|.||+|+| .+|+.
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 7778888888887 7889999999986554444568889999999999999999 55553
No 185
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.40 E-value=1.6e-06 Score=88.08 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=77.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHh---CCCc---EEEEecCCcchhhc-----------------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVG---WKLD---TTIIFPENHLLQRL----------------------------------- 255 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~---~g~~---Vtlv~~~~~~~~~~----------------------------------- 255 (497)
++|+|||+|+.|+.+|..|++ .|.+ |+++++.+.+....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 99999875431100
Q ss_pred ----------------cCHHHHHHHHHHHHHCCcE--EEcCCeEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEec
Q 010917 256 ----------------FTPSLAQRYEQLYQQNGVK--FVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGI 312 (497)
Q Consensus 256 ----------------~~~~~~~~~~~~l~~~GV~--i~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vv~a~ 312 (497)
-...+.+++.+.+++.|++ ++++++|++++..+++....|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 0134566777777888998 8999999999865442122444443 4 578999999999
Q ss_pred c--CcCCCc
Q 010917 313 G--AKPTVS 319 (497)
Q Consensus 313 G--~~p~~~ 319 (497)
| ..|+..
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677644
No 186
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.40 E-value=7.1e-07 Score=89.32 Aligned_cols=98 Identities=14% Similarity=0.216 Sum_probs=76.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+...-. .+ ...+ ...+.+.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtvv~~~~~~l~~-------~~------~~~~-----------~~~l~~~l 204 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGV---NVTLLEALPRVLAR-------VA------GEAL-----------SEFYQAEH 204 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTTT-------TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC---eEEEEecCCchhhh-------hc------CHHH-----------HHHHHHHH
Confidence 5799999999999999999999987 89999987653100 00 0000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCCC---EEEECCCcEEEeccEEeccCCCCC
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~---~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
++.|+++++++.|..+..++. .+.+++|+++.+|.||+|+|..|.
T Consensus 205 ~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 205 RAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp HHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred HhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 888999999999999987543 578889999999999999998876
No 187
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.40 E-value=3.3e-07 Score=91.33 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=32.0
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
-||+||||||+||++|..|+++|+ +|+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~---~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGI---KVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---CEEEEecCCCC
Confidence 389999999999999999999998 89999997654
No 188
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.40 E-value=8.8e-08 Score=98.68 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=36.5
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccC
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATG 180 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG 180 (497)
.+.|++++++++|++|+.+++.+++.+|+++.||+||.++-
T Consensus 233 ~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 233 PKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp CGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSC
T ss_pred HhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCC
Confidence 34588999999999999999999999999999999998754
No 189
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.40 E-value=4.2e-07 Score=91.91 Aligned_cols=98 Identities=17% Similarity=0.251 Sum_probs=73.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++++|||||++|+.+|..|++.|. +|+++++.+...- . .+ ...+ ...+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~------~-~~------~~~~-----------~~~l~~~ 200 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGK---KVTVIDILDRPLG------V-YL------DKEF-----------TDVLTEE 200 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTT------T-TC------CHHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---eEEEEecCccccc------c-cC------CHHH-----------HHHHHHH
Confidence 45899999999999999999999987 8999999764210 0 00 0000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+++.|++++++++|.+++.+++ .+.+ ++.++.+|.||+|+|..|.
T Consensus 201 l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 201 MEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 7788999999999999987643 3555 4567999999999998876
No 190
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.39 E-value=1.1e-06 Score=84.85 Aligned_cols=99 Identities=16% Similarity=0.233 Sum_probs=76.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEec----CCcch------------hh----ccCHHHHHHHHHHHHHCCcEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP----ENHLL------------QR----LFTPSLAQRYEQLYQQNGVKFV 276 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~----~~~~~------------~~----~~~~~~~~~~~~~l~~~GV~i~ 276 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++ ...+. +. ....++...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999997 21110 00 1124677778888889999999
Q ss_pred cCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 277 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 277 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
.++ +..++..++ .+ .+.+ +++++.+|.||+|+|..|...
T Consensus 89 ~~~-v~~i~~~~~-~~-~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 89 TET-VTKVDFSSK-PF-KLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp CCC-CCEEECSSS-SE-EEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred EeE-EEEEEEcCC-EE-EEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 987 888885433 22 3555 778899999999999987643
No 191
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.39 E-value=2.6e-06 Score=84.22 Aligned_cols=97 Identities=21% Similarity=0.297 Sum_probs=71.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh-------------------------------------------
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------- 254 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------- 254 (497)
.|+|||+|+.|+-+|..|++.|.+|+|+++.+.+...
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 4999999999999999999999999999986432100
Q ss_pred ------------ccC-HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe-CCC--cEEEcCEEEEeccCc
Q 010917 255 ------------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDG--STIDADTIVIGIGAK 315 (497)
Q Consensus 255 ------------~~~-~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~-~~g--~~i~~D~vv~a~G~~ 315 (497)
.++ ..+...+.+...+.|++++.+++++.+... ++.+..+.. .++ .++.+|.||-|.|..
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCccc
Confidence 001 234456677778899999999999998754 455444433 233 368899999999854
No 192
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=6.7e-07 Score=91.75 Aligned_cols=98 Identities=14% Similarity=0.192 Sum_probs=76.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ ...+.+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l~~~l 227 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGI---DSYIFARGNRIL---RKFD-----------ESV-----------INVLENDM 227 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC---EEEEECSSSSSC---TTSC-----------HHH-----------HHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCC---eEEEEecCCccC---cccc-----------hhh-----------HHHHHHHH
Confidence 5799999999999999999999987 899999876421 0000 000 12345677
Q ss_pred HHcCcEEEeCCcEEEEecCC---CEEEECCCcE-EEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEK---QTLITNSGKL-LKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~---~~v~~~~g~~-i~~d~lvlAtG~~~~~ 185 (497)
++.||+++++++|.+++.+. ..+.+++|++ +.+|.||+|+|..|..
T Consensus 228 ~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 228 KKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred HhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 88999999999999998643 3678888887 9999999999998764
No 193
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.38 E-value=2e-07 Score=93.18 Aligned_cols=98 Identities=21% Similarity=0.337 Sum_probs=74.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHh---CCCcEEEEecCCcchhhc----------cCHHHHHHHHHHHHHCCcEEEcCCeEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------FTPSLAQRYEQLYQQNGVKFVKGASIKN 283 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~~~~~~~----------~~~~~~~~~~~~l~~~GV~i~~~~~v~~ 283 (497)
++|+|||+|+.|+.+|..|++ .|.+|+|+++.+.+.... ...++...+.+.+++.|++++.+ ++++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 899999999887543210 11223334566777889999988 8999
Q ss_pred EEeCCCCcEEEEEeCCCc----EEEcCEEEEeccCcCCCc
Q 010917 284 LEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~----~i~~D~vv~a~G~~p~~~ 319 (497)
++.. +. .|.+.+++ ++.+|.||+|+|.+|+..
T Consensus 81 i~~~-~~---~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAK-SS---MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETT-TT---EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCC-CC---EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 9853 22 34555554 499999999999988754
No 194
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.38 E-value=1.8e-06 Score=82.35 Aligned_cols=100 Identities=10% Similarity=0.162 Sum_probs=70.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc----------chh--hccCHHHHHHHHHHHHHCC-cEEEcCCeEEEE
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH----------LLQ--RLFTPSLAQRYEQLYQQNG-VKFVKGASIKNL 284 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~----------~~~--~~~~~~~~~~~~~~l~~~G-V~i~~~~~v~~i 284 (497)
.|+|||+|+.|+.+|..+++.|.+|+++++... +.. ....+++.+...+.+.+.+ +.++.. .+..+
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 86 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEK-TVVMI 86 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEEC-CEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEee-EEEEe
Confidence 599999999999999999999999999987531 100 0112345555555555554 555544 45566
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 285 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 285 ~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
...+++. ..+.+.+|+++.+|.||+|||.+|...
T Consensus 87 ~~~~~~~-~~v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 87 TKQSTGL-FEIVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp EECTTSC-EEEEETTCCEEEEEEEEECCCCEEECC
T ss_pred eecCCCc-EEEEECCCCEEEeCEEEEccCCccccc
Confidence 5444443 357889999999999999999987643
No 195
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.37 E-value=1.1e-06 Score=87.26 Aligned_cols=35 Identities=26% Similarity=0.522 Sum_probs=32.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
.+||+|||||++|+++|+.|+++|+ +|+|+|+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~---~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGH---RVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCC
Confidence 3699999999999999999999998 8999999764
No 196
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.37 E-value=5.8e-07 Score=91.68 Aligned_cols=99 Identities=15% Similarity=0.217 Sum_probs=76.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ ...+.+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l~~~ 235 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGS---ETHLVIRGETVL---RKFD-----------ECI-----------QNTITDH 235 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEeCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999876421 0000 000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCC----CEEEECCC-cEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEK----QTLITNSG-KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~----~~v~~~~g-~~i~~d~lvlAtG~~~~~ 185 (497)
+++.||+++++++|.+++.+. ..+.+++| +++.+|.||+|+|..|..
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 788899999999999997642 36788888 789999999999988764
No 197
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.37 E-value=2.8e-07 Score=86.23 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=33.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
+.||+|||||||||+||..|+++|+ +|+|+|+++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~---~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCC
Confidence 4799999999999999999999998 89999998754
No 198
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.37 E-value=7.5e-07 Score=88.79 Aligned_cols=99 Identities=24% Similarity=0.435 Sum_probs=75.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCC--cEEEEecCCcchh-------hcc-----CHHHHHHHHHHHHHCCcEEEcCCeE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQ-------RLF-----TPSLAQRYEQLYQQNGVKFVKGASI 281 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~~~-------~~~-----~~~~~~~~~~~l~~~GV~i~~~~~v 281 (497)
.++|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. ..+ ...+.....+.+++.+|+++. .++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v 79 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRM 79 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEE
Confidence 3689999999999999999999998 8999998763211 000 111122345667889999999 899
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 282 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 282 ~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
++++.. ++ .+.+.+|+++.+|.+|+|+|.+|...
T Consensus 80 ~~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 113 (404)
T 3fg2_P 80 VSIDRE--GR--KLLLASGTAIEYGHLVLATGARNRML 113 (404)
T ss_dssp EEEETT--TT--EEEESSSCEEECSEEEECCCEEECCC
T ss_pred EEEECC--CC--EEEECCCCEEECCEEEEeeCCCccCC
Confidence 999853 22 47788999999999999999987643
No 199
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=3.7e-07 Score=92.57 Aligned_cols=99 Identities=14% Similarity=0.274 Sum_probs=73.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+.+|..|++.|. +|+|+++.+... +.+ ...+ ...+.+.
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~ 220 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGT---KVTILEGAGEIL---SGF-----------EKQM-----------AAIIKKR 220 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TTS-----------CHHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCccc---ccc-----------CHHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999876421 000 0000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEEC---CCcEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~---~g~~i~~d~lvlAtG~~~~~ 185 (497)
+++.||+++++++|.+++.+.. .+.+. +++++.+|.||+|+|..|..
T Consensus 221 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 221 LKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp HHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 7888999999999999986553 34443 45679999999999988763
No 200
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.35 E-value=7.2e-07 Score=91.75 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=33.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
..+||||||||+|||+||..|+++|. +|+||||.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~---~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGA---DVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 35799999999999999999999997 89999998753
No 201
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.35 E-value=2.2e-06 Score=85.13 Aligned_cols=100 Identities=15% Similarity=0.123 Sum_probs=78.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh-------------------------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------- 253 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------- 253 (497)
.+|+|||+|..|+.+|..|++.|.+|+|+++.+.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998654300
Q ss_pred --h--------------ccCHHHHHHHHHHHHHC-CcEEEcCCeEEEEEeCCCCcEE-EEEeCCCcEEEcCEEEEeccCc
Q 010917 254 --R--------------LFTPSLAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVA-AVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 254 --~--------------~~~~~~~~~~~~~l~~~-GV~i~~~~~v~~i~~~~~~~v~-~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
. .....+.+.+.+.+++. |++++.+++|++++.+++ .+. .+++.+|+++.+|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER-HAIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC-ceEEEEEECCCCEEECCEEEECCCCC
Confidence 0 00124556667777777 999999999999987544 342 5778899899999999999987
Q ss_pred CC
Q 010917 316 PT 317 (497)
Q Consensus 316 p~ 317 (497)
..
T Consensus 166 s~ 167 (399)
T 2x3n_A 166 SY 167 (399)
T ss_dssp CH
T ss_pred hH
Confidence 64
No 202
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.35 E-value=1.6e-06 Score=86.53 Aligned_cols=99 Identities=24% Similarity=0.427 Sum_probs=75.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCc--EEEEecCCcchhh--ccCHHHH---------HHHHHHHHHCCcEEEcCCeEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLD--TTIIFPENHLLQR--LFTPSLA---------QRYEQLYQQNGVKFVKGASIKN 283 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~--Vtlv~~~~~~~~~--~~~~~~~---------~~~~~~l~~~GV~i~~~~~v~~ 283 (497)
++|+|||+|+.|+.+|..|++.|.+ |+++++.+.+... .+...+. ....+.+++.||+++.+++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 5899999999999999999999987 9999987653210 0111111 1123456788999999999999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 284 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
++.. .+ .+.+.+|+++.+|.+|+|+|.+|...
T Consensus 83 id~~--~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDVQ--TR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EETT--TT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EECC--CC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 9853 22 57788999999999999999987654
No 203
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.34 E-value=1.3e-06 Score=87.85 Aligned_cols=102 Identities=24% Similarity=0.431 Sum_probs=76.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCC--cEEEEecCCcchh------h-ccC-----HHHHHHHHHHHHHCCcEEEcCCeE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQ------R-LFT-----PSLAQRYEQLYQQNGVKFVKGASI 281 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~~~------~-~~~-----~~~~~~~~~~l~~~GV~i~~~~~v 281 (497)
..+|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. . .+. ..+.....+.+++.||+++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999998 7999998754210 0 000 011111235677899999999999
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcch
Q 010917 282 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 321 (497)
Q Consensus 282 ~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~ 321 (497)
..++.. + . .|.+.+|+++.+|.+|+|+|.+|....+
T Consensus 84 ~~i~~~-~-~--~v~~~~g~~~~~d~lviAtG~~p~~~~i 119 (431)
T 1q1r_A 84 TAINRD-R-Q--QVILSDGRALDYDRLVLATGGRPRPLPV 119 (431)
T ss_dssp EEEETT-T-T--EEEETTSCEEECSEEEECCCEEECCCGG
T ss_pred EEEECC-C-C--EEEECCCCEEECCEEEEcCCCCccCCCC
Confidence 999853 2 2 4677888899999999999999875443
No 204
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.34 E-value=7.1e-07 Score=93.56 Aligned_cols=97 Identities=20% Similarity=0.376 Sum_probs=77.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ ...+.+.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l 238 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGI---EVTLVEMANQVM---PPID-----------YEM-----------AAYVHEHM 238 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSC-----------HHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCccc---ccCC-----------HHH-----------HHHHHHHH
Confidence 5799999999999999999999987 899999876421 0000 000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCC
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
++.|++++++++|..++.+...+.+.+|+++.+|.||+|+|..|.
T Consensus 239 ~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 239 KNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp HHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCC
Confidence 889999999999999988767899999999999999999998765
No 205
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.34 E-value=2.7e-07 Score=92.80 Aligned_cols=98 Identities=23% Similarity=0.342 Sum_probs=74.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHh--CCCcEEEEecCCcchhhccCH----------HHHHHHHHHHHHCCcEEEcCCeEEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLFTP----------SLAQRYEQLYQQNGVKFVKGASIKNL 284 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~~~~~~~----------~~~~~~~~~l~~~GV~i~~~~~v~~i 284 (497)
++|+|||+|+.|+.+|..|++ .|.+|+|+++.+.+......+ ++...+.+.+++.||+++.+ +++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 789999999987653211111 11112344566789999975 89999
Q ss_pred EeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 285 EAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 285 ~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
+.. +. .+.+.+++++.+|.+|+|+|.+|+..
T Consensus 82 d~~--~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPD--AN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETT--TT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECC--CC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 853 22 46788898999999999999987654
No 206
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.33 E-value=8e-07 Score=91.00 Aligned_cols=98 Identities=17% Similarity=0.298 Sum_probs=76.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~---g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
.++++|||||+.|+.+|..|++. |. +|+++++.+... +.+. ..+ ...+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l~ 242 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGG---KVTLCYRNNLIL---RGFD-----------ETI-----------REEVT 242 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTC---EEEEEESSSSSC---TTSC-----------HHH-----------HHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEEcCCccc---cccC-----------HHH-----------HHHHH
Confidence 57999999999999999999999 76 899999876421 0000 000 12345
Q ss_pred hHHHHcCcEEEeCCcEEEEecCC---CEEEECCCcEEEeccEEeccCCCCCc
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~---~~v~~~~g~~i~~d~lvlAtG~~~~~ 185 (497)
+.+++.||+++++++|.+++.+. ..+.+.+|+++.+|.||+|+|..|..
T Consensus 243 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 243 KQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 67788999999999999998653 36788888889999999999988763
No 207
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.33 E-value=2.7e-06 Score=87.57 Aligned_cols=103 Identities=21% Similarity=0.277 Sum_probs=80.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC--cch-----------hhccCHHHHHHHHHHHHHCCcEEEcCCeEE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL-----------QRLFTPSLAQRYEQLYQQNGVKFVKGASIK 282 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~--~~~-----------~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~ 282 (497)
..+|+|||+|+.|+.+|..|++.|.+|+++++.. .+. +....+++...+.+.+++.|++++.++++.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 4579999999999999999999999999997531 110 001234677788888899999999999999
Q ss_pred EEEeCCC-CcEEEEEeCCCcEEEcCEEEEeccCcCCC
Q 010917 283 NLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 318 (497)
Q Consensus 283 ~i~~~~~-~~v~~v~~~~g~~i~~D~vv~a~G~~p~~ 318 (497)
+++...+ +....+.+.+|+++.+|.||+|+|..|..
T Consensus 292 ~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 292 KLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 9974321 22345788889899999999999988753
No 208
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.32 E-value=8.6e-07 Score=90.66 Aligned_cols=98 Identities=17% Similarity=0.261 Sum_probs=76.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~---g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
.++++|||||+.|+.+|..|++. |. +|+++++.+... +.+. ..+ ...+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~l~ 238 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGG---QVDLAYRGDMIL---RGFD-----------SEL-----------RKQLT 238 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTC---EEEEEESSSSSS---TTSC-----------HHH-----------HHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcC---eEEEEEcCCCcc---cccC-----------HHH-----------HHHHH
Confidence 57999999999999999999999 76 899999886421 0000 000 12345
Q ss_pred hHHHHcCcEEEeCCcEEEEecCC---CEEEECCCcEEEeccEEeccCCCCCc
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~---~~v~~~~g~~i~~d~lvlAtG~~~~~ 185 (497)
+.+++.||+++++++|.+++.+. ..+.+++|+++.+|.||+|+|..|..
T Consensus 239 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 239 EQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 66788999999999999998653 36788888889999999999988763
No 209
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.32 E-value=2.6e-07 Score=92.34 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=32.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCc-EEEEcCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGR-LCIVSKEAY 97 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~-V~lie~~~~ 97 (497)
..+||+|||||++|+++|..|++.|+ + |+|+|+.+.
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~~v~v~E~~~~ 39 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGI---GKVTLLESSSE 39 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---SEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC---CeEEEEECCCC
Confidence 35799999999999999999999998 8 999999865
No 210
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.32 E-value=3.9e-06 Score=87.53 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=78.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh-----------------------------------------
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 254 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 254 (497)
..+|+|||+|..|+.+|..|++.|.+|+|+++.+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 357999999999999999999999999999987543210
Q ss_pred ----------------------------------------------ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCC
Q 010917 255 ----------------------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 288 (497)
Q Consensus 255 ----------------------------------------------~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~ 288 (497)
..+..+...+.+.+++.||+++++++++++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 0012344566677788999999999999998654
Q ss_pred CCcEEEEEeC--CCc--EEEcCEEEEeccCcC
Q 010917 289 DGRVAAVKLE--DGS--TIDADTIVIGIGAKP 316 (497)
Q Consensus 289 ~~~v~~v~~~--~g~--~i~~D~vv~a~G~~p 316 (497)
++++.+|... +|+ ++.+|.||+|+|...
T Consensus 286 ~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 286 KGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp TSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 4777666654 675 689999999999754
No 211
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.31 E-value=2.8e-06 Score=81.59 Aligned_cols=99 Identities=19% Similarity=0.270 Sum_probs=76.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc---c--------hhh----ccCHHHHHHHHHHHHHCCcEEEcCCeE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGASI 281 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------~~~----~~~~~~~~~~~~~l~~~GV~i~~~~~v 281 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++... + .+. ...+++...+.+.+++.|++++.+. +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 5799999999999999999999999999985410 0 011 1224677778888899999999986 8
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 282 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 282 ~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
..++..+ +.+ .+ +.+++++.+|.+|+|+|..|...
T Consensus 85 ~~i~~~~-~~~-~v-~~~~~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 85 NKVDLQN-RPF-RL-NGDNGEYTCDALIIATGASARYL 119 (320)
T ss_dssp EEEECSS-SSE-EE-EESSCEEEEEEEEECCCEEECCC
T ss_pred eEEEecC-CEE-EE-EeCCCEEEcCEEEECCCCCcCCC
Confidence 8887543 332 33 56788899999999999987643
No 212
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.31 E-value=8.9e-07 Score=91.33 Aligned_cols=97 Identities=20% Similarity=0.233 Sum_probs=75.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHHH
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 140 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (497)
++++|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ ...+.+.++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l~ 266 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGR---RTVMLVRTEPLK---LIKD-----------NET-----------RAYVLDRMK 266 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT---TCCS-----------HHH-----------HHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC---eEEEEEecCccc---cccc-----------HHH-----------HHHHHHHHH
Confidence 899999999999999999999987 899999876421 0000 000 123456778
Q ss_pred HcCcEEEeCCcEEEEec--CC----CEEEECCCc-EEEeccEEeccCCCCCc
Q 010917 141 EKGIEMIYQDPVTSIDI--EK----QTLITNSGK-LLKYGSLIVATGCTASR 185 (497)
Q Consensus 141 ~~~v~~~~~~~v~~i~~--~~----~~v~~~~g~-~i~~d~lvlAtG~~~~~ 185 (497)
+.|++++++++|.+++. +. ..+.+++|+ ++.+|.||+|+|..|..
T Consensus 267 ~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred hCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 89999999999999986 33 346777887 89999999999988763
No 213
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.30 E-value=1.4e-06 Score=89.42 Aligned_cols=34 Identities=15% Similarity=0.437 Sum_probs=31.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+||+|||||++|+++|+.|+++|+ +|+|+|+++
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~---~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGL---SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC---CEEEEECCC
Confidence 4799999999999999999999998 899999975
No 214
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.30 E-value=5.4e-07 Score=92.00 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=74.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+ ...+ ...+.+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~l 236 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGS---RLDVVEMMDGLM---QGA-----------DRDL-----------VKVWQKQN 236 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTS-----------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc---ccc-----------CHHH-----------HHHHHHHH
Confidence 5799999999999999999999987 899999876421 000 0000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCCC--EEEECC----CcEEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ--TLITNS----GKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~--~v~~~~----g~~i~~d~lvlAtG~~~~~ 185 (497)
++.||+++++++|.+++.+.. .+.+.+ |+++.+|.||+|+|..|..
T Consensus 237 ~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 237 EYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp GGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred HhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 788999999999999976543 466665 6779999999999988763
No 215
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.29 E-value=1.9e-06 Score=89.01 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=31.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
..+||||||||+||++||..|++ |. +|+|+||.+.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~---~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QH---QVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TS---CEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CC---cEEEEECCCC
Confidence 35799999999999999999999 87 8999999864
No 216
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.29 E-value=7.5e-07 Score=90.89 Aligned_cols=98 Identities=17% Similarity=0.322 Sum_probs=73.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ ...+.+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l 234 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGS---KVTVVEFQPQIG---ASMD-----------GEV-----------AKATQKFL 234 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---SSSC-----------HHH-----------HHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEEeCCccc---cccC-----------HHH-----------HHHHHHHH
Confidence 5799999999999999999999987 899999886421 0000 000 12345667
Q ss_pred HHcCcEEEeCCcEEEEec--CCC--EEEEC-----CCcEEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDI--EKQ--TLITN-----SGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~--~~~--~v~~~-----~g~~i~~d~lvlAtG~~~~~ 185 (497)
++.||+++++++|.+++. +.. .+.+. +++++.+|.||+|+|..|..
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 889999999999999986 443 44554 34679999999999988763
No 217
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.29 E-value=3.3e-07 Score=94.96 Aligned_cols=45 Identities=20% Similarity=0.386 Sum_probs=35.6
Q ss_pred HHHcCcEEEeCCcEEEEecCC--C--EEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~--~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+.+.|++++.+ +|+.++.+. . .|.+.+|+++.+|.||.|+|....
T Consensus 175 a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 175 AVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 34579999998 899987642 2 577788878999999999998644
No 218
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.28 E-value=9.7e-07 Score=89.94 Aligned_cols=99 Identities=11% Similarity=0.173 Sum_probs=73.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+...-. .+ ..++ ...+.+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~--~~-----------~~~~-----------~~~l~~~l 230 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGA---DVTAVEFLGHVGGV--GI-----------DMEI-----------SKNFQRIL 230 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSCS--SC-----------CHHH-----------HHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEeccCccCCc--cc-----------CHHH-----------HHHHHHHH
Confidence 4799999999999999999999987 89999987642100 00 0000 12345677
Q ss_pred HHcCcEEEeCCcEEEEecCCC---EEEE-----CCCcEEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQ---TLIT-----NSGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~---~v~~-----~~g~~i~~d~lvlAtG~~~~~ 185 (497)
++.||+++++++|.+++.+.. .+.+ .+++++.+|.||+|+|..|..
T Consensus 231 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 231 QKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred HHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 889999999999999986552 3442 456789999999999988763
No 219
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.28 E-value=1.5e-06 Score=89.53 Aligned_cols=98 Identities=10% Similarity=0.086 Sum_probs=75.4
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHh
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 137 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (497)
..+++++|||||+.|+..|..+++.|. +|||++++..++.. + .++ .....+
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~---~VTii~~~~~L~~~------------D---~ei-----------~~~l~~ 271 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGY---DVTVAVRSIVLRGF------------D---QQC-----------AVKVKL 271 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEESSCSSTTS------------C---HHH-----------HHHHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCC---eEEEeccccccccc------------c---hhH-----------HHHHHH
Confidence 345799999999999999999999997 89999875432110 0 000 123466
Q ss_pred HHHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCC
Q 010917 138 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 138 ~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
.+++.|+++++++.+..+..... .+.+.++..+.+|.|++|+|-+|+
T Consensus 272 ~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 272 YMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp HHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCC
Confidence 78889999999999998876655 456678888999999999997765
No 220
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.27 E-value=1.3e-06 Score=89.63 Aligned_cols=99 Identities=14% Similarity=0.261 Sum_probs=76.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+ ...+ ...+.+.
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------d~~~-----------~~~l~~~ 232 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGV---PVTVVASQDHVL---PYE-----------DADA-----------ALVLEES 232 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTC---CEEEECSSSSSS---CCS-----------SHHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc---ccc-----------CHHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999876421 000 0000 1234567
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~~ 185 (497)
+++.|++++++++|.+++.+.. .+.+.+|+++.+|.||+|+|..|..
T Consensus 233 l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 233 FAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 7889999999999999986553 5666788889999999999988764
No 221
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.27 E-value=9.7e-07 Score=89.69 Aligned_cols=99 Identities=20% Similarity=0.260 Sum_probs=74.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+ ...+ ...+.+.
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~ 221 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGV---DVTIVEFLPRAL---PNE-----------DADV-----------SKEIEKQ 221 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTS-----------CHHH-----------HHHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCC---eEEEEEcCCccc---ccc-----------CHHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999876421 000 0000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEEC-CC--cEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITN-SG--KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~-~g--~~i~~d~lvlAtG~~~~~ 185 (497)
+++.||++++++++.+++.+.. .+.+. +| +++.+|.||+|+|..|..
T Consensus 222 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 222 FKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp HHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred HHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 7888999999999999986543 44543 56 579999999999988763
No 222
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.27 E-value=2.7e-06 Score=82.33 Aligned_cols=100 Identities=18% Similarity=0.267 Sum_probs=76.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC---cc--------hhh----ccCHHHHHHHHHHHHHCCcEEEcCCe
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN---HL--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGAS 280 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~---~~--------~~~----~~~~~~~~~~~~~l~~~GV~i~~~~~ 280 (497)
..+|+|||+|+.|+.+|..|++.|.+|+++++.. .+ .+. ...+++...+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 4689999999999999999999999999998531 00 011 1124677778888889999999987
Q ss_pred EEEEEeCCCCcEEEE-EeCCCcEEEcCEEEEeccCcCCCc
Q 010917 281 IKNLEAGSDGRVAAV-KLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 281 v~~i~~~~~~~v~~v-~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
+.+++. ++. . .+ .+.+|+++.+|.+|+|+|..|...
T Consensus 93 v~~i~~-~~~-~-~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 93 VESVSL-HGP-L-KSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp EEEEEC-SSS-S-EEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEe-CCc-E-EEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 888875 222 2 34 677888999999999999987643
No 223
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.26 E-value=1.6e-06 Score=88.69 Aligned_cols=98 Identities=17% Similarity=0.297 Sum_probs=73.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... .. .+ ...+ ...+.+.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l------~~-~~------~~~~-----------~~~l~~~ 245 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGK---EVVLIDVVDTCL------AG-YY------DRDL-----------TDLMAKN 245 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTT------TT-TS------CHHH-----------HHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---eEEEEEcccchh------hh-HH------HHHH-----------HHHHHHH
Confidence 45899999999999999999999987 899999876421 00 00 0000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+++.||+++++++|.+++.+.+ .+.+ +++++.+|.||+|+|..|.
T Consensus 246 l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 246 MEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred HHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 7788999999999999987543 3555 6678999999999998876
No 224
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.26 E-value=2.4e-07 Score=92.48 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~ 96 (497)
..+||+|||||++|+++|+.|+++ |+ +|+|||+..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~---~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGR---SLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCC---eEEEEeCCC
Confidence 347999999999999999999999 87 899999974
No 225
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.25 E-value=2.9e-06 Score=88.10 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEeccCcC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKP 316 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~vv~a~G~~p 316 (497)
..+...+.+.+++.|++++++++|+++... ++.+..|.+.+ | .++.+|.||.|+|...
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 456677778888999999999999999864 56666676653 3 4799999999999754
No 226
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.25 E-value=4.6e-06 Score=79.80 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=74.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc----c----h------------hhccCHHHHHHHHHHHHHCCcEEEc
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH----L----L------------QRLFTPSLAQRYEQLYQQNGVKFVK 277 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~----~----~------------~~~~~~~~~~~~~~~l~~~GV~i~~ 277 (497)
.|+|||+|+.|+.+|..++++|.+|+++++.+. + . .....+++...+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 699999999999999999999999999987531 0 0 0012256777788888999999886
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 278 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 278 ~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
.. +.......+. ..+.+.++.++.+|.+|+|||.+|...
T Consensus 86 ~~-v~~~~~~~~~--~~~~~~~~~~~~~~~liiATG~~~~~~ 124 (314)
T 4a5l_A 86 ET-IDHVDFSTQP--FKLFTEEGKEVLTKSVIIATGATAKRM 124 (314)
T ss_dssp CC-EEEEECSSSS--EEEEETTCCEEEEEEEEECCCEEECCC
T ss_pred eE-EEEeecCCCc--eEEEECCCeEEEEeEEEEccccccccc
Confidence 65 5555433222 346678889999999999999988643
No 227
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.24 E-value=4.9e-06 Score=84.02 Aligned_cols=102 Identities=17% Similarity=0.145 Sum_probs=75.5
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCC--cEEEEecCCcchhhc-------------------------------------
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQRL------------------------------------- 255 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~~~~~------------------------------------- 255 (497)
..++|+|||+|+.|+.+|..|++.|. +|+++++.+.+....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35789999999999999999999999 999999874321000
Q ss_pred ----------------------------cCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC---Cc---
Q 010917 256 ----------------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--- 301 (497)
Q Consensus 256 ----------------------------~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~---g~--- 301 (497)
....+.+++.+..++.++.++++++|++++..+++. .|++.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~--~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSW--VVTYKGTKAGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEE--EEEEEESSTTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeE--EEEEeecCCCCeeE
Confidence 012455666676666688899999999998653322 344444 66
Q ss_pred EEEcCEEEEeccC--cCCC
Q 010917 302 TIDADTIVIGIGA--KPTV 318 (497)
Q Consensus 302 ~i~~D~vv~a~G~--~p~~ 318 (497)
++.+|.||+|+|. .|+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEEESEEEECCCSSSSBCB
T ss_pred EEEeCEEEECCCCCCCCCC
Confidence 7999999999998 6654
No 228
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.24 E-value=8.8e-06 Score=78.60 Aligned_cols=97 Identities=12% Similarity=0.131 Sum_probs=70.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh-------------------ccCHHHHHHHH------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------------------LFTPSLAQRYE------------ 265 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------------~~~~~~~~~~~------------ 265 (497)
.+|+|||+|++|+.+|..|++.|.+|+|+++.+.+..+ ...+.+...+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999987643110 01122222221
Q ss_pred -------------------------------HHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEecc
Q 010917 266 -------------------------------QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIG 313 (497)
Q Consensus 266 -------------------------------~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~-~D~vv~a~G 313 (497)
+.+. .|++++++++|++++..+++ + .+++.+|+.+. +|.||.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~-~-~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH-W-NLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC-E-EEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE-E-EEEeCCCcCccccCEEEEcCC
Confidence 2222 38999999999999876544 3 47788888764 999999999
Q ss_pred CcC
Q 010917 314 AKP 316 (497)
Q Consensus 314 ~~p 316 (497)
...
T Consensus 160 ~~~ 162 (336)
T 1yvv_A 160 APQ 162 (336)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 229
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.24 E-value=2.2e-06 Score=86.62 Aligned_cols=100 Identities=23% Similarity=0.404 Sum_probs=70.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcchhh------cc-----CHHHHHHHHHHH-HHCCcEEEcCCeE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQR------LF-----TPSLAQRYEQLY-QQNGVKFVKGASI 281 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~~------~~-----~~~~~~~~~~~l-~~~GV~i~~~~~v 281 (497)
.++|+|||+|+.|+.+|..|++. +.+|+++++.+.+... .+ ...+.....+.+ ++.||+++.++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 36899999999999999999998 7899999988743210 00 111112222333 6789999999999
Q ss_pred EEEEeCCCCcEEEEEeCCC-cEEEcCEEEEeccCcCCCc
Q 010917 282 KNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 282 ~~i~~~~~~~v~~v~~~~g-~~i~~D~vv~a~G~~p~~~ 319 (497)
..++.. . ..+.+.++ .++.+|.+|+|+|.+|...
T Consensus 83 ~~i~~~--~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDTG--Y--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECSS--E--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEecC--C--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 998632 2 24566777 4899999999999988644
No 230
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.23 E-value=5.6e-06 Score=79.44 Aligned_cols=99 Identities=15% Similarity=0.186 Sum_probs=75.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc---c--------hhh---ccCHHHHHHHHHHHHHCCcEEEcCCeE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR---LFTPSLAQRYEQLYQQNGVKFVKGASI 281 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~--------~~~---~~~~~~~~~~~~~l~~~GV~i~~~~~v 281 (497)
..+|+|||+|+.|+.+|..|++.|.+|+++++... + .+. ....++...+.+.+++.|++++. .++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeE
Confidence 35799999999999999999999999999998421 0 111 11245667777888889999998 688
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCC
Q 010917 282 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 318 (497)
Q Consensus 282 ~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~ 318 (497)
.+++..++ .+ .+.+ ++.++.+|.+|+|+|..|..
T Consensus 95 ~~i~~~~~-~~-~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 95 RSIKKTQG-GF-DIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEEETT-EE-EEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEEeCC-EE-EEEE-CCCEEEeCEEEECCCCCccc
Confidence 88875432 22 3555 56789999999999988764
No 231
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.23 E-value=2.1e-06 Score=86.93 Aligned_cols=101 Identities=14% Similarity=0.238 Sum_probs=73.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcchh------hccCH------HHHHHHHHHHHHCCcEEEcCCeEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQ------RLFTP------SLAQRYEQLYQQNGVKFVKGASIK 282 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~------~~~~~------~~~~~~~~~l~~~GV~i~~~~~v~ 282 (497)
++|+|||+|+.|+.+|..|++. |.+|+++++.+.+.. ..... ++.....+.+++.|++++.+.+|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 899999998875431 00111 111113466788999999999999
Q ss_pred EEEeCCCCcEEEEE-eCCCcEEEcCEEEEeccCcCCCc
Q 010917 283 NLEAGSDGRVAAVK-LEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 283 ~i~~~~~~~v~~v~-~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
+++.. +..+ .+. ..+++++.+|.+|+|+|.+|...
T Consensus 83 ~id~~-~~~v-~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDVE-NQLI-AWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEETT-TTEE-EEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEECC-CCEE-EEEecCceEEEEcCEEEECCCcccCCC
Confidence 99854 3322 232 23556899999999999998754
No 232
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.23 E-value=1.6e-06 Score=88.23 Aligned_cols=99 Identities=15% Similarity=0.240 Sum_probs=73.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+ ...+ ...+.+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------d~~~-----------~~~l~~~ 224 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGA---EVTVVEFAPRCA---PTL-----------DEDV-----------TNALVGA 224 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTS-----------CHHH-----------HHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCC---EEEEEecCCccc---ccC-----------CHHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999876421 000 0000 1234566
Q ss_pred H-HHcCcEEEeCCcEEEEecCCC--EEEEC--CC--cEEEeccEEeccCCCCCc
Q 010917 139 Y-KEKGIEMIYQDPVTSIDIEKQ--TLITN--SG--KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~-~~~~v~~~~~~~v~~i~~~~~--~v~~~--~g--~~i~~d~lvlAtG~~~~~ 185 (497)
+ ++.||+++++++|.+++.+.. .+.+. +| +++.+|.||+|+|..|..
T Consensus 225 l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 225 LAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred HhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 7 889999999999999986543 45554 56 579999999999988763
No 233
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.23 E-value=5.6e-06 Score=82.04 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=76.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch-----------h-------h------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-----------Q-------R------------------------ 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------~-------~------------------------ 254 (497)
.+|+|||+|+.|+.+|..|++.|.+|+|+++.+... + .
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 369999999999999999999999999999876310 0 0
Q ss_pred --c--------------cC-HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe-CCCc--EEEcCEEEEeccC
Q 010917 255 --L--------------FT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGA 314 (497)
Q Consensus 255 --~--------------~~-~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~-~~g~--~i~~D~vv~a~G~ 314 (497)
. ++ ..+...+.+.+.+.|++++.+++|++++..+++.+ .+++ .+|+ ++.+|.||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCC
Confidence 0 01 23445566667778999999999999986433333 4565 6786 7999999999998
Q ss_pred cCCC
Q 010917 315 KPTV 318 (497)
Q Consensus 315 ~p~~ 318 (497)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 7653
No 234
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.23 E-value=1.8e-06 Score=87.33 Aligned_cols=98 Identities=15% Similarity=0.300 Sum_probs=73.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+... .. .+ ...+ ...+.+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l------~~-~~------~~~~-----------~~~l~~~l 201 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNY---NVNLIDGHERVL------YK-YF------DKEF-----------TDILAKDY 201 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSTT------TT-TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCC---EEEEEEcCCchh------hh-hh------hhhH-----------HHHHHHHH
Confidence 5799999999999999999999986 899999876421 00 00 0000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCCCEE--EECCCcEEEeccEEeccCCCCC
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTL--ITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v--~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
++.|++++++++|.+++.++..+ ...+|+++.+|.||+|+|..|.
T Consensus 202 ~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 202 EAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 88999999999999998633322 2346788999999999998876
No 235
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.23 E-value=5.3e-06 Score=81.76 Aligned_cols=63 Identities=16% Similarity=0.290 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcC
Q 010917 259 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 325 (497)
Q Consensus 259 ~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~g 325 (497)
.+...+.+.+++.|++++.+++|++++.. ++.+ .|.+.+| ++.+|.||+|+|.... .++..++
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~~~ 227 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG-MFFKQLG 227 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH-HHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH-HHHHhcC
Confidence 35566777788899999999999999865 4445 6777777 7999999999998653 4555544
No 236
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.22 E-value=1.3e-06 Score=83.69 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=33.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 98 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~~~ 98 (497)
..+||+|||||++|+++|..|+++ |+ +|+|||+.+..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~---~V~LiEk~~~~ 116 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDL---RITIVEAGVAP 116 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTS---CEEEEESSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCC---EEEEEeCCCcc
Confidence 358999999999999999999998 76 89999998654
No 237
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.21 E-value=1.5e-06 Score=88.58 Aligned_cols=97 Identities=18% Similarity=0.267 Sum_probs=73.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+ ...+ ...+.+.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~ 236 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGK---KVRMIERNDHIG---TIY-----------DGDM-----------AEYIYKE 236 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTC---EEEEECCGGGTT---SSS-----------CHHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEEeCCchh---hcC-----------CHHH-----------HHHHHHH
Confidence 45899999999999999999999987 899999875421 000 0000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCCE--EEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQT--LITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~--v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+++.|++++++++|.+++.+.+. +.++ +.++.+|.||+|+|..|.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 237 ADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred HHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 78899999999999999876542 4454 457999999999998875
No 238
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.21 E-value=9e-06 Score=84.12 Aligned_cols=100 Identities=17% Similarity=0.237 Sum_probs=77.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc-ch-----------------------hh------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------------------ 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~-----------------------~~------------------ 254 (497)
-.|+|||+|..|+++|..+++.|.+|.|+++.+. +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 5799999999999999999999999999997631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHH-CCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCC
Q 010917 255 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 318 (497)
Q Consensus 255 -----------~~~-~~~~~~~~~~l~~-~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~ 318 (497)
..+ ..+...+.+.+++ .|++++ +..|+++..+ ++.+..|.+.+|+++.+|.||+|+|..++.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 001 1345566677777 599995 5689998754 667778999999999999999999987553
No 239
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.21 E-value=1.6e-06 Score=90.56 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=32.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
.+||||||||+||++||..|++.|. +|+|+||.+.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~---~V~vlEK~~~ 41 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQ---TCALLSKVFP 41 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCC
Confidence 4699999999999999999999987 8999999753
No 240
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.20 E-value=2.3e-06 Score=87.40 Aligned_cols=98 Identities=20% Similarity=0.343 Sum_probs=75.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++++|||+|+.|+..|..|++.|. +|+++++.+... +.+. ..+ ...+.+.
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 241 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGV---KTTLLHRGDLIL---RNFD-----------YDL-----------RQLLNDA 241 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCC---eEEEEECCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999986 899999876421 0000 000 1234556
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+++.|++++++++|.+++.+.. .+.+++|+++.+|.||+|+|..|.
T Consensus 242 l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 242 MVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 7788999999999999987543 678888888999999999998765
No 241
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=1.2e-06 Score=89.28 Aligned_cols=99 Identities=16% Similarity=0.314 Sum_probs=74.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ ...+.+.
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 227 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGS---EVTVVEFASEIV---PTMD-----------AEI-----------RKQFQRS 227 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCccc---cccc-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999886421 0000 000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEEC---CC--cEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SG--KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~---~g--~~i~~d~lvlAtG~~~~~ 185 (497)
+++.||+++++++|.+++.+.. .+.+. +| +++.+|.||+|+|..|..
T Consensus 228 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 228 LEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp HHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred HHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 7889999999999999987653 44443 44 679999999999988763
No 242
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.20 E-value=4.5e-06 Score=79.75 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=74.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEE-EecCCcch------------hh----ccCHHHHHHHHHHHHHCCcEEEcC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTI-IFPENHLL------------QR----LFTPSLAQRYEQLYQQNGVKFVKG 278 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtl-v~~~~~~~------------~~----~~~~~~~~~~~~~l~~~GV~i~~~ 278 (497)
.++|+|||+|+.|+.+|..|++.|.+|++ +++. .+. +. ....++..++.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 35899999999999999999999999999 8873 221 11 012467788888889999999998
Q ss_pred CeEEEEEeCCC-CcEEEE-EeCCCcEEEcCEEEEeccCcCCCc
Q 010917 279 ASIKNLEAGSD-GRVAAV-KLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 279 ~~v~~i~~~~~-~~v~~v-~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
++.++ ..++ +.. .+ ...++ ++.+|.+|+|+|..|+..
T Consensus 83 -~v~~i-~~~~~~~~-~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 -GVEQI-LKNSDGSF-TIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp -CEEEE-EECTTSCE-EEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred -EEEEE-ecCCCCcE-EEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 78888 4331 222 32 22334 899999999999987654
No 243
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.20 E-value=5.3e-06 Score=82.39 Aligned_cols=100 Identities=17% Similarity=0.275 Sum_probs=73.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh-----ccCHHHHH----------------------------
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----LFTPSLAQ---------------------------- 262 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----~~~~~~~~---------------------------- 262 (497)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+..... .+.+....
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653110 01221111
Q ss_pred ---------------HHHHHHHH--CCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 263 ---------------RYEQLYQQ--NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 263 ---------------~~~~~l~~--~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
.+.+.|.+ .|++++.+++|++++..+++ + .+++.+|+++.+|.||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET-V-QMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-E-EEEETTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-E-EEEECCCCEEECCEEEECCCcchh
Confidence 12222222 38899999999999875443 3 478889999999999999998753
No 244
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.20 E-value=1.7e-05 Score=82.10 Aligned_cols=98 Identities=14% Similarity=0.185 Sum_probs=75.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch--------hh------------cc----------------CHHH
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL--------QR------------LF----------------TPSL 260 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------~~------------~~----------------~~~~ 260 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. .+ .+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999875421 00 00 1334
Q ss_pred HHHHHHHHHHCC--cEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccC
Q 010917 261 AQRYEQLYQQNG--VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 314 (497)
Q Consensus 261 ~~~~~~~l~~~G--V~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~ 314 (497)
.+++....++.+ ++++++++|.+++..+++....|.+.+|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 556666666665 678899999999865444344678889989999999999995
No 245
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.19 E-value=2.5e-06 Score=86.65 Aligned_cols=102 Identities=14% Similarity=0.155 Sum_probs=75.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCC-----CcEEEEecCCcchhh--------------------------------------
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWK-----LDTTIIFPENHLLQR-------------------------------------- 254 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g-----~~Vtlv~~~~~~~~~-------------------------------------- 254 (497)
+|+|||+|+.|+.+|..|++.| .+|+++++.+.+...
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 999999987632100
Q ss_pred ----------c--cCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCC-CcE--EEEEeCCCc----EEEcCEEEEeccCc
Q 010917 255 ----------L--FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD-GRV--AAVKLEDGS----TIDADTIVIGIGAK 315 (497)
Q Consensus 255 ----------~--~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~-~~v--~~v~~~~g~----~i~~D~vv~a~G~~ 315 (497)
. ...++.+++....++.+++++++++|++++..++ +.. ..|.+.+|+ ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 0 0134445565666667899999999999976421 222 246666665 89999999999998
Q ss_pred CCCc
Q 010917 316 PTVS 319 (497)
Q Consensus 316 p~~~ 319 (497)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 8644
No 246
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.19 E-value=9.1e-07 Score=93.49 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=33.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHH-cCCCCCcEEEEcCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAYA 98 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~-~g~~~~~V~lie~~~~~ 98 (497)
..++|+||||||+||++|..|++ .|+ +|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~---~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDI---RTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTS---CEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCC---CEEEEeCCCCC
Confidence 35799999999999999999999 898 89999998643
No 247
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.19 E-value=1.1e-05 Score=83.80 Aligned_cols=99 Identities=19% Similarity=0.236 Sum_probs=76.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc-ch-----------------------hh------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------------------ 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~-----------------------~~------------------ 254 (497)
-.|+|||||..|+++|..+++.|.+|+|+++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999997631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHH-CCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 255 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 255 -----------~~~-~~~~~~~~~~l~~-~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+ ..+...+.+.+++ .|++++ +..|+++..+ ++.+..|.+.+|.++.+|.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 011 1345566777777 699995 5689998754 56777888989989999999999998654
No 248
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.18 E-value=2.4e-06 Score=89.02 Aligned_cols=98 Identities=15% Similarity=0.274 Sum_probs=74.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ ...+.+.
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 201 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGI---KTTLLELADQVM---TPVD-----------REM-----------AGFAHQA 201 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSC---TTSC-----------HHH-----------HHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC---cEEEEEcCCccc---hhcC-----------HHH-----------HHHHHHH
Confidence 34799999999999999999999987 899999876421 0000 000 1234556
Q ss_pred HHHcCcEEEeCCcEEEEec-------------------CCC--EEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDI-------------------EKQ--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~-------------------~~~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+++.||++++++++.+++. ... .+.+.+|+++.+|.||+|+|..|.
T Consensus 202 l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 202 IRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp HHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 7889999999999999876 222 566788889999999999998775
No 249
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.17 E-value=2.8e-06 Score=86.36 Aligned_cols=96 Identities=18% Similarity=0.272 Sum_probs=73.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... + +. ..+ ...+.+.
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~-~~-----------~~~-----------~~~l~~~ 225 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGS---KVTVLARNTLFF---R-ED-----------PAI-----------GEAVTAA 225 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT---T-SC-----------HHH-----------HHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEEECCccC---C-CC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999876421 0 00 000 1234567
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+++.|++++++++|.+++.++. .+.++ +.++.+|.||+|+|..|.
T Consensus 226 l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 226 FRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcC
Confidence 7889999999999999986554 35555 457999999999998876
No 250
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.17 E-value=4.3e-06 Score=85.11 Aligned_cols=102 Identities=20% Similarity=0.268 Sum_probs=64.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcch------hhccC------HHH-------HHHHHHHHHHCCcE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL------QRLFT------PSL-------AQRYEQLYQQNGVK 274 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~------~~~~~------~~~-------~~~~~~~l~~~GV~ 274 (497)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. +..+. ..+ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 89999999987641 11111 111 11222222357999
Q ss_pred EEcCCeEEEEEeCCCCcEEEEEe-CCCc--EEEcCEEEEeccCcCCCc
Q 010917 275 FVKGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 275 i~~~~~v~~i~~~~~~~v~~v~~-~~g~--~i~~D~vv~a~G~~p~~~ 319 (497)
++.++++.+++.. +..+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~V~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDRA-AHTV-EIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEECC-CCEE-EEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 9999999999853 3333 3332 3465 799999999999988654
No 251
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.17 E-value=2.2e-06 Score=89.74 Aligned_cols=34 Identities=32% Similarity=0.322 Sum_probs=31.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+||||||||+||++||..|++.|. +|+|+||..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~---~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGF---NTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCC---cEEEEeccC
Confidence 4799999999999999999999997 899999975
No 252
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.16 E-value=1.2e-05 Score=81.44 Aligned_cols=100 Identities=20% Similarity=0.220 Sum_probs=77.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh---------------h---------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ---------------R--------------------------- 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---------------~--------------------------- 254 (497)
.+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.. .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998754210 0
Q ss_pred ---------ccC-HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC---CCc--EEEcCEEEEeccCcCC
Q 010917 255 ---------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKPT 317 (497)
Q Consensus 255 ---------~~~-~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~---~g~--~i~~D~vv~a~G~~p~ 317 (497)
.++ ..+.+.+.+.+.+.|++++.+++|+++..+ ++.+.+|.+. +|+ ++.+|.||.|.|....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 001 235566777778899999999999999864 4555545554 675 7999999999998764
No 253
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.15 E-value=1.9e-06 Score=93.97 Aligned_cols=37 Identities=19% Similarity=0.377 Sum_probs=32.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
.++||+|||||++|+++|++|+++|+. +|+|||++..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~--~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWN--NITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCC--CEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCC--cEEEEeCCCC
Confidence 357999999999999999999999862 6999999864
No 254
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.15 E-value=1.4e-05 Score=83.03 Aligned_cols=101 Identities=18% Similarity=0.305 Sum_probs=76.6
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc-ch-----------------------hh----------------
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR---------------- 254 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~-----------------------~~---------------- 254 (497)
..-.|+|||+|..|+++|..+++.|.+|+++++.+. +. ..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 345899999999999999999999999999997631 10 00
Q ss_pred -------------ccC-HHHHHHHHHHHHH-CCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 255 -------------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 255 -------------~~~-~~~~~~~~~~l~~-~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+ ..+...+.+.+++ .|++++.+ .|+.+..+ ++.+.+|.+.+|+++.+|.||+|+|..++
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 011 1345566677777 49999754 78888653 56677788899999999999999998755
No 255
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.15 E-value=1.6e-05 Score=78.34 Aligned_cols=54 Identities=17% Similarity=0.271 Sum_probs=43.6
Q ss_pred HHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 262 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 262 ~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+.+.+++.|++++.+++|++++.. ++.+..|.+.+| ++.+|.||+|+|....
T Consensus 153 ~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 153 TAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWAN 206 (382)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred HHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHH
Confidence 44566778899999999999999865 456656778777 7999999999998653
No 256
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.15 E-value=2.7e-05 Score=74.62 Aligned_cols=139 Identities=20% Similarity=0.228 Sum_probs=90.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcchhh-------------------------------------cc
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQR-------------------------------------LF 256 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~~-------------------------------------~~ 256 (497)
...|+|||+|+.|+.+|..|++. |.+|+|+++.+.+... ..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 35799999999999999999997 9999999987533200 00
Q ss_pred CHHHHHHHHHHHHH-CCcEEEcCCeEEEEEeCCC----------------C--cEEEEEeC--------------CCcEE
Q 010917 257 TPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSD----------------G--RVAAVKLE--------------DGSTI 303 (497)
Q Consensus 257 ~~~~~~~~~~~l~~-~GV~i~~~~~v~~i~~~~~----------------~--~v~~v~~~--------------~g~~i 303 (497)
..++...+.+.+.+ .|++++.++.+.++...++ + ++.+|... +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 12334556666666 5999999999998865432 2 66666542 23479
Q ss_pred EcCEEEEeccCcCCC-c----chhhcCCccc-CCCEEec---------CCCCCCCCcEEEeccccc
Q 010917 304 DADTIVIGIGAKPTV-S----PFERVGLNSS-VGGIQVD---------GQFRTRMPGIFAIGDVAA 354 (497)
Q Consensus 304 ~~D~vv~a~G~~p~~-~----~~~~~gl~~~-~g~i~vd---------~~~~t~~~~iya~GD~~~ 354 (497)
.++.||.|+|..... . .+...++... .|.-..+ ++-+--+|++|++|=.+.
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~ 304 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELS 304 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHH
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhH
Confidence 999999999987642 1 1334444311 1111111 111113699999997764
No 257
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.13 E-value=3.2e-06 Score=86.47 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=71.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ ...+.+.
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 224 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGV---IVKVFGRSGSVA---NLQDE-----------EM-----------KRYAEKT 224 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTC---EEEEECCTTCCT---TCCCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc---ccCCH-----------HH-----------HHHHHHH
Confidence 35899999999999999999999987 899999886531 00000 00 1223445
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEEC--CC--cEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITN--SG--KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~--~g--~~i~~d~lvlAtG~~~~~ 185 (497)
+++. |++++++++..+..+.. .+.+. +| .++.+|.||+|+|..|..
T Consensus 225 l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 225 FNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp HHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred HhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 5556 99999999999976543 44443 66 679999999999988763
No 258
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.13 E-value=4.1e-06 Score=85.32 Aligned_cols=99 Identities=15% Similarity=0.276 Sum_probs=74.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+..|..|++.|. +|+++++.+... +.+ ...+ ...+.+.
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~-----------~~~~-----------~~~l~~~ 230 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGA---EVTVLEAMDKFL---PAV-----------DEQV-----------AKEAQKI 230 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TTS-----------CHHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEecCCCcC---ccc-----------CHHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999876421 000 0000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECCC---cEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSG---KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g---~~i~~d~lvlAtG~~~~~ 185 (497)
+++.||++++++++.+++.+.. .+.+.++ +++.+|.||+|+|..|..
T Consensus 231 l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 231 LTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred HHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 7888999999999999986543 4555544 578999999999988763
No 259
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.12 E-value=4.1e-06 Score=85.01 Aligned_cols=98 Identities=18% Similarity=0.290 Sum_probs=75.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++++|||||+.|+..|..|++.|. +|+++++.+... +.+. ..+ ...+.+.
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vt~v~~~~~~l---~~~~-----------~~~-----------~~~l~~~ 220 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGV---KTTLIYRGKEIL---SRFD-----------QDM-----------RRGLHAA 220 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccC-----------HHH-----------HHHHHHH
Confidence 35799999999999999999999987 899999876421 0000 000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCC-C--EEE-ECCCcEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEK-Q--TLI-TNSGKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~-~--~v~-~~~g~~i~~d~lvlAtG~~~~~ 185 (497)
+++.|++++++++|.+++.+. . .+. +++|+ +.+|.||+|+|..|..
T Consensus 221 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 221 MEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred HHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 788999999999999998753 2 577 78887 9999999999987763
No 260
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.11 E-value=2.2e-05 Score=81.82 Aligned_cols=101 Identities=20% Similarity=0.299 Sum_probs=79.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC------CCcEEEEecCCcchhh------------------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGW------KLDTTIIFPENHLLQR------------------------------------ 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~------------------------------------ 254 (497)
-+|+|||+|+.|+-+|..|++. |.+|+|+++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999976432110
Q ss_pred c--------c---C--------------HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC------CC---
Q 010917 255 L--------F---T--------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE------DG--- 300 (497)
Q Consensus 255 ~--------~---~--------------~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~------~g--- 300 (497)
. + + ..+...+.+.+++.||++++++.++++..++++.+..|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 0 0 0 13456677778889999999999999987666777777775 33
Q ss_pred ------cEEEcCEEEEeccCcCC
Q 010917 301 ------STIDADTIVIGIGAKPT 317 (497)
Q Consensus 301 ------~~i~~D~vv~a~G~~p~ 317 (497)
.++.+|.||.|.|....
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCH
T ss_pred cccCCceEEECCEEEEeeCCCch
Confidence 68999999999999764
No 261
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.11 E-value=1.8e-05 Score=75.62 Aligned_cols=98 Identities=19% Similarity=0.230 Sum_probs=73.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc---ch--------h---hccCHHHHHHHHHHHHHCCcEEEcCCeEEE
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---LL--------Q---RLFTPSLAQRYEQLYQQNGVKFVKGASIKN 283 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~---~~--------~---~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~ 283 (497)
.|+|||+|+.|+.+|..|++.|.+|+++++... ++ + ....+++.........+.++.+..+.....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999987531 11 0 011245666677777888888888876666
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCc
Q 010917 284 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
.... .. .+...+++++.+|.+|+|||.+|...
T Consensus 88 ~~~~-~~---~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 88 EDKG-EY---KVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EECS-SC---EEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eeee-cc---eeeccCCeEEEeceeEEcccCccCcC
Confidence 5532 22 34567788999999999999988654
No 262
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.11 E-value=1.4e-05 Score=79.31 Aligned_cols=99 Identities=15% Similarity=0.139 Sum_probs=72.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh------ccCHHH------------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSL------------------------------ 260 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------~~~~~~------------------------------ 260 (497)
-+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+... .+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 37999999999999999999999999999986543211 001100
Q ss_pred -----------------------------HHHHHHHHH-HCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEE
Q 010917 261 -----------------------------AQRYEQLYQ-QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 310 (497)
Q Consensus 261 -----------------------------~~~~~~~l~-~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~ 310 (497)
...+.+.|. ..+..+++++++++++..+++.+ .+++.||+++.+|+||-
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVG 160 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEE
Confidence 011223222 23456888999999987666655 68899999999999999
Q ss_pred eccCcC
Q 010917 311 GIGAKP 316 (497)
Q Consensus 311 a~G~~p 316 (497)
|-|...
T Consensus 161 ADG~~S 166 (412)
T 4hb9_A 161 ADGSNS 166 (412)
T ss_dssp CCCTTC
T ss_pred CCCCCc
Confidence 999764
No 263
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.11 E-value=3.4e-06 Score=86.81 Aligned_cols=45 Identities=11% Similarity=0.139 Sum_probs=35.5
Q ss_pred HHHcCcEEEeCCcEEEEecC--C--CEEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIE--K--QTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~--~--~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+.+.|++++.+ +|+++..+ . ..|.+++|+++.+|.||.|+|....
T Consensus 183 a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 183 AIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 34569999998 99998763 2 2467788888999999999998643
No 264
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.11 E-value=1.1e-05 Score=79.73 Aligned_cols=99 Identities=20% Similarity=0.281 Sum_probs=76.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh--------------h----------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ--------------R---------------------------- 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--------------~---------------------------- 254 (497)
.+|+|||+|..|+-+|..|++.|.+|+|+++.+.+.. .
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 3699999999999999999999999999998742110 0
Q ss_pred ccC--------------HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCcEEEcCEEEEeccCcC
Q 010917 255 LFT--------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 255 ~~~--------------~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~---~~g~~i~~D~vv~a~G~~p 316 (497)
.++ ..+...+.+.+++.|++++.+++|++++.. ++.+.+|.+ .+++++.+|.||.|.|...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 000 124456777778889999999999999865 566655665 3556899999999999875
No 265
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.10 E-value=3.7e-06 Score=86.03 Aligned_cols=99 Identities=17% Similarity=0.235 Sum_probs=73.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||||+.|+..|..|++.|. +|+++++.+...- .+ ...+ ...+.+.
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~---~~-----------d~~~-----------~~~l~~~ 248 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGA---KVTVVEFLDTILG---GM-----------DGEV-----------AKQLQRM 248 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSSS---SS-----------CHHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEeccccccc---cC-----------CHHH-----------HHHHHHH
Confidence 35799999999999999999999987 8999998764310 00 0000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECC---C--cEEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS---G--KLLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~---g--~~i~~d~lvlAtG~~~~~ 185 (497)
+++.||++++++++.++..+.. .+.+.+ | +++.+|.||+|+|..|..
T Consensus 249 l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred HHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 7888999999999999876554 344442 4 579999999999988763
No 266
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.10 E-value=3.5e-06 Score=88.78 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=31.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+||||||||.||++||.+|++.|. +|+||||.+
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~---~V~vlEK~~ 38 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGL---STIVLSLIP 38 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTC---CEEEECSSC
T ss_pred cccEEEECchHHHHHHHHHHHHCCC---cEEEEeccC
Confidence 4799999999999999999999987 899999975
No 267
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.10 E-value=4.9e-06 Score=85.06 Aligned_cols=101 Identities=18% Similarity=0.258 Sum_probs=73.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCC-CCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMA-DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~-~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
.++|+|||||+.|+.+|..|++.+.. ..+|+++++.+.. ..+ .+ + ..+ ...+.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~-~~~------~l-~-----~~~-----------~~~~~~~ 235 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN-MGK------IL-P-----EYL-----------SNWTMEK 235 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST-TTT------TS-C-----HHH-----------HHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc-ccc------cC-C-----HHH-----------HHHHHHH
Confidence 57999999999999999999874210 1379999876431 000 00 0 000 1233556
Q ss_pred HHHcCcEEEeCCcEEEEecCCC--EEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+++.||+++++++|..++.+.. .+.+.+|+++.+|.||+|+|..|.
T Consensus 236 l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 236 VRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 7788999999999999975443 577889989999999999998876
No 268
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.08 E-value=1.8e-05 Score=82.41 Aligned_cols=100 Identities=16% Similarity=0.223 Sum_probs=77.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh-----------------------------------------
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 254 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 254 (497)
..+|+|||||..|+-+|..|++.|.+|+|+++.+.....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 468999999999999999999999999999987311000
Q ss_pred ---------------------ccC-HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC-CC--cEEEcCEEE
Q 010917 255 ---------------------LFT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIV 309 (497)
Q Consensus 255 ---------------------~~~-~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~~D~vv 309 (497)
.++ ..+...+.+.+++.|++++.+++|+++... ++.+..|.+. +| +++.+|.||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 001 245566777788899999999999999854 4444567776 66 579999999
Q ss_pred EeccCcC
Q 010917 310 IGIGAKP 316 (497)
Q Consensus 310 ~a~G~~p 316 (497)
.|+|...
T Consensus 182 ~AdG~~S 188 (591)
T 3i3l_A 182 DAGGSGG 188 (591)
T ss_dssp ECCGGGC
T ss_pred ECCCCcc
Confidence 9999865
No 269
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.07 E-value=6e-06 Score=78.73 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=32.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 98 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~~~ 98 (497)
..+||+|||||++|++||..|++. |+ +|+|+|+.+..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~---~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDL---KVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCC---eEEEEecCccc
Confidence 346999999999999999999998 76 89999998654
No 270
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.06 E-value=3.4e-06 Score=86.10 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=71.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++++|||||+.|+..|..|++.|. +|+++++....+ .+. .++ ...+.+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l~----~~d-----------~~~-----------~~~l~~~ 236 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGY---EPTVMVRSIVLR----GFD-----------QQM-----------AELVAAS 236 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSCSST----TSC-----------HHH-----------HHHHHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCCCc----ccC-----------HHH-----------HHHHHHH
Confidence 34789999999999999999999987 899998743211 000 000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecCC---CEEEECCCc-----EEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEK---QTLITNSGK-----LLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~---~~v~~~~g~-----~i~~d~lvlAtG~~~~ 184 (497)
+++.||++++++.+.++.... ..+.+.++. ++.+|.||+|+|..|.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 237 MEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 788999999999999987632 246665543 7899999999998775
No 271
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.06 E-value=2.4e-05 Score=80.32 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=75.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc----------------chhh--------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH----------------LLQR-------------------------- 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~----------------~~~~-------------------------- 254 (497)
.+|+|||+|..|+-+|..|++.|.+|+|+++.+. ++..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 4799999999999999999999999999998741 0000
Q ss_pred -------------------cc-CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEE--eCCCc--EEEcCEEEE
Q 010917 255 -------------------LF-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK--LEDGS--TIDADTIVI 310 (497)
Q Consensus 255 -------------------~~-~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~--~~~g~--~i~~D~vv~ 310 (497)
.+ ...+...+.+.+++.|++++.+++|+++... ++.+..+. ..+|+ ++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 00 1234556777778899999999999999864 55554444 45674 799999999
Q ss_pred eccCcC
Q 010917 311 GIGAKP 316 (497)
Q Consensus 311 a~G~~p 316 (497)
|+|...
T Consensus 167 AdG~~S 172 (512)
T 3e1t_A 167 ASGNRT 172 (512)
T ss_dssp CCCTTC
T ss_pred CCCcch
Confidence 999865
No 272
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.06 E-value=4e-06 Score=86.96 Aligned_cols=36 Identities=17% Similarity=0.257 Sum_probs=32.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
.+||+||||||+|+++|..|+++|. +|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~---~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQV---GHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 4699999999999999999999998 89999998643
No 273
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.05 E-value=4.6e-06 Score=85.00 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=72.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.+... +.+. ..+ .....+.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d-----------~~~-----------~~~~~~~l 238 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGS---KTSLMIRHDKVL---RSFD-----------SMI-----------STNCTEEL 238 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSC-----------HHH-----------HHHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCC---eEEEEEeCCccc---cccC-----------HHH-----------HHHHHHHH
Confidence 5799999999999999999999987 899999876421 0000 000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCC-C---EEEECC-------CcEEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEK-Q---TLITNS-------GKLLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~-~---~v~~~~-------g~~i~~d~lvlAtG~~~~~ 185 (497)
++.||++++++.+.+++... . .+.+.+ |..+.+|.||+|+|..|..
T Consensus 239 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 239 ENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp HHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 88999999999999987542 2 355554 2578999999999987763
No 274
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.04 E-value=4e-06 Score=88.34 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHc------CCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~------g~~~~~V~lie~~~~ 97 (497)
.+||||||||+|||+||..|++. |. +|+||||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~---~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEA---KILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTC---CEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCC---cEEEEEecCC
Confidence 57999999999999999999997 87 8999999753
No 275
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.04 E-value=1.9e-05 Score=76.62 Aligned_cols=95 Identities=18% Similarity=0.196 Sum_probs=69.2
Q ss_pred eEEEEcCCHHHHHHHHHHHh---CCCcEEEEecCCcchhhc-------------------c---CH---HH---------
Q 010917 218 KVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL-------------------F---TP---SL--------- 260 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~~~~~~~-------------------~---~~---~~--------- 260 (497)
+|+|||+|..|+-+|..|++ .|.+|+++++.+.+..+. + +. .+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 999999999764321100 0 00 11
Q ss_pred -----------------------------HHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEe
Q 010917 261 -----------------------------AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIG 311 (497)
Q Consensus 261 -----------------------------~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a 311 (497)
...+....++.|+++++++.|++|+..+++ + .|.+.+|+++.+|.||+|
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~A 160 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVLT 160 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEEC
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEEC
Confidence 112222333348999999999999876444 3 477888888999999999
Q ss_pred ccC
Q 010917 312 IGA 314 (497)
Q Consensus 312 ~G~ 314 (497)
++.
T Consensus 161 ~p~ 163 (342)
T 3qj4_A 161 MPV 163 (342)
T ss_dssp SCH
T ss_pred CCH
Confidence 874
No 276
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.03 E-value=3.3e-05 Score=75.72 Aligned_cols=54 Identities=19% Similarity=0.340 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcC
Q 010917 260 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 260 ~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p 316 (497)
+...+.+.+++.|++++.+++|++++..+++ + .+.+.+|+ +.+|.||+|+|...
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~g~-~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-V-TIETADGE-YQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSCE-EEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-E-EEEECCCe-EEcCEEEEcCCccH
Confidence 3445666777889999999999999865443 3 56777774 99999999999754
No 277
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.01 E-value=6.7e-06 Score=84.03 Aligned_cols=98 Identities=12% Similarity=0.149 Sum_probs=70.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++++|||||+.|+..|..|++.|. +|+++++....+ .+. .++ ...+.+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~l~----~~d-----------~~~-----------~~~l~~~ 234 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGL---DTTVMMRSIPLR----GFD-----------QQM-----------SSLVTEH 234 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSST----TSC-----------HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEcCcccc----cCC-----------HHH-----------HHHHHHH
Confidence 34689999999999999999999987 899998753211 000 000 1234566
Q ss_pred HHHcCcEEEeCCcEEEEecC-C--CEEEECC---Cc--EEEeccEEeccCCCCCc
Q 010917 139 YKEKGIEMIYQDPVTSIDIE-K--QTLITNS---GK--LLKYGSLIVATGCTASR 185 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~-~--~~v~~~~---g~--~i~~d~lvlAtG~~~~~ 185 (497)
+++.||++++++.+..+... . ..+.+.+ |+ ++.+|.||+|+|..|..
T Consensus 235 l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 235 MESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp HHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESC
T ss_pred HHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCccc
Confidence 78899999999888888652 2 2455443 44 47899999999987753
No 278
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.00 E-value=2e-05 Score=81.86 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=75.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch-------------------------------------hhc----
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------QRL---- 255 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------~~~---- 255 (497)
..|+|||+|+.|+-+|..|++.|.+|+|+++.+... ...
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999753210 000
Q ss_pred ---------------c-CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe--CCC-cEEEcCEEEEeccCcC
Q 010917 256 ---------------F-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL--EDG-STIDADTIVIGIGAKP 316 (497)
Q Consensus 256 ---------------~-~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~--~~g-~~i~~D~vv~a~G~~p 316 (497)
+ ...+...+.+.+++.|++++.+++|++++.++++. .+++ .+| +++.+|+||.|.|...
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v--~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV--EVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE--EEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE--EEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 0 12355667777788899999999999998765543 3444 778 7899999999999864
No 279
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.99 E-value=6.9e-05 Score=77.45 Aligned_cols=55 Identities=16% Similarity=0.284 Sum_probs=45.5
Q ss_pred HHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 262 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 262 ~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+.+.+++.|++++.+ +|++++..+++.+..|.+.+|+++.+|.||.|+|....
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 44556667789999999 89999876566666788889988999999999998765
No 280
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.99 E-value=4.5e-05 Score=72.65 Aligned_cols=101 Identities=21% Similarity=0.226 Sum_probs=73.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcchhhc-------------------------------------cC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQRL-------------------------------------FT 257 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~~~~~-------------------------------------~~ 257 (497)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+.... ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 3799999999999999999998 99999999865432100 01
Q ss_pred HHHHHHHHHHHHHC-CcEEEcCCeEEEEEeCC--C-C--cEEEEEeC--------------CCcEEEc------------
Q 010917 258 PSLAQRYEQLYQQN-GVKFVKGASIKNLEAGS--D-G--RVAAVKLE--------------DGSTIDA------------ 305 (497)
Q Consensus 258 ~~~~~~~~~~l~~~-GV~i~~~~~v~~i~~~~--~-~--~v~~v~~~--------------~g~~i~~------------ 305 (497)
.++...+.+.+.+. ||+++.++.++++...+ + + ++.++... ++.++.+
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~ 225 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLS 225 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSS
T ss_pred HHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccc
Confidence 23445566666664 99999999999997653 3 4 77777652 3457999
Q ss_pred ---CEEEEeccCcCC
Q 010917 306 ---DTIVIGIGAKPT 317 (497)
Q Consensus 306 ---D~vv~a~G~~p~ 317 (497)
|.||.|+|....
T Consensus 226 ~~~~~VV~ATG~~~~ 240 (326)
T 2gjc_A 226 QKHGVILSTTGHDGP 240 (326)
T ss_dssp TTCCEEEECCCCC--
T ss_pred ccCCEEEECcCCCch
Confidence 999999998754
No 281
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.99 E-value=4e-06 Score=84.62 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=69.8
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch-------hh-ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEe
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------QR-LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 286 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~~-~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~ 286 (497)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. .++.++.....+.+++.||++++++.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~--- 197 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR--- 197 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc---
Confidence 46789999999999999999999999999999987641 11 13556777778889999999999986520
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 287 GSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 287 ~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
.+.++++ .+.+|.||+|+|..
T Consensus 198 -------~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 -------DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp -------TBCHHHH-HSSCSEEEECCCCC
T ss_pred -------EEEhhHh-HhhCCEEEEecCCC
Confidence 1222332 25799999999986
No 282
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.98 E-value=1.7e-05 Score=80.55 Aligned_cols=98 Identities=23% Similarity=0.291 Sum_probs=71.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhcc------------------------------CH-H------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLF------------------------------TP-S------ 259 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~------------------------------~~-~------ 259 (497)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+..... +- .
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 3699999999999999999999999999997765421100 00 0
Q ss_pred ----HH--HHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcE--EEcCEEEEeccCcCCCc
Q 010917 260 ----LA--QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST--IDADTIVIGIGAKPTVS 319 (497)
Q Consensus 260 ----~~--~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~--i~~D~vv~a~G~~p~~~ 319 (497)
+. ..+.+.+++.||+++.+ ++..++. +. ..+.+.+|++ +.+|.+|+|+|.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~---~~-~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYKG-YVKIKDP---TH-VIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEESE-EEEEEET---TE-EEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHhCCCEEEEe-EEEEecC---Ce-EEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 01 33445556789999888 5777652 22 3577788888 99999999999988654
No 283
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.97 E-value=3.1e-05 Score=77.04 Aligned_cols=100 Identities=20% Similarity=0.296 Sum_probs=74.4
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh----------------------------------------
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR---------------------------------------- 254 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---------------------------------------- 254 (497)
...+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3568999999999999999999999999999987532100
Q ss_pred -----cc-----------------CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEec
Q 010917 255 -----LF-----------------TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGI 312 (497)
Q Consensus 255 -----~~-----------------~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~ 312 (497)
.+ ...+.+.+.+.+.+ ++++++++|++++..++ .+ .+++.+|+++.+|.||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v-~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD-GV-TVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT-EE-EEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC-cE-EEEEcCCCEEeeCEEEECC
Confidence 00 01233444444444 88999999999987543 33 5788999999999999999
Q ss_pred cCcCCC
Q 010917 313 GAKPTV 318 (497)
Q Consensus 313 G~~p~~ 318 (497)
|.....
T Consensus 178 G~~S~v 183 (407)
T 3rp8_A 178 GSHSAL 183 (407)
T ss_dssp CTTCSS
T ss_pred CcChHH
Confidence 987543
No 284
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.97 E-value=3.3e-05 Score=79.88 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=75.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch--------------------------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------------- 252 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 252 (497)
.+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999874220
Q ss_pred -------h----h-----------------cc-CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCC---cEEEEEeCCC
Q 010917 253 -------Q----R-----------------LF-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG---RVAAVKLEDG 300 (497)
Q Consensus 253 -------~----~-----------------~~-~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~---~v~~v~~~~g 300 (497)
. . .+ ...+...+.+.+++.|+++++++++++++.++++ .+ .+.+.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v-~v~~~~~ 164 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV-TARLAGP 164 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE-EEEEEET
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE-EEEEEcC
Confidence 0 0 00 1235566777888899999999999999876442 33 4555555
Q ss_pred ---cEEEcCEEEEeccCcC
Q 010917 301 ---STIDADTIVIGIGAKP 316 (497)
Q Consensus 301 ---~~i~~D~vv~a~G~~p 316 (497)
.++.+|+||.|.|...
T Consensus 165 ~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 165 DGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TEEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCCcc
Confidence 6899999999999753
No 285
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.93 E-value=3.8e-05 Score=76.13 Aligned_cols=101 Identities=17% Similarity=0.299 Sum_probs=71.7
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh----cc---C---HHH------------------------
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----LF---T---PSL------------------------ 260 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----~~---~---~~~------------------------ 260 (497)
...+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+..+ .+ . ...
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 3468999999999999999999999999999987543210 00 0 000
Q ss_pred ----------------------HHHHHHHHHHC--CcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcC
Q 010917 261 ----------------------AQRYEQLYQQN--GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 261 ----------------------~~~~~~~l~~~--GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p 316 (497)
...+.+.|.+. +++++++++|++++..++ .+ .+++.+|+++.+|.||.|.|...
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-~v-~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKK-KW-TLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSS-SE-EEEETTSCCEEESEEEECSCTTC
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCC-EE-EEEECCCcEEecCEEEECCCcch
Confidence 01122222221 357888999999986543 33 57888998899999999999876
Q ss_pred C
Q 010917 317 T 317 (497)
Q Consensus 317 ~ 317 (497)
.
T Consensus 183 ~ 183 (398)
T 2xdo_A 183 K 183 (398)
T ss_dssp S
T ss_pred h
Confidence 4
No 286
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.92 E-value=9e-06 Score=83.15 Aligned_cols=99 Identities=21% Similarity=0.305 Sum_probs=70.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCC-----------CCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGM-----------ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGS 129 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~-----------~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 129 (497)
.+++|||||+.|+..|..|++.+. +..+|+|+|..+... |.+.. .+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il---~~~~~-----------~~--------- 274 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL---NMFEK-----------KL--------- 274 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS---TTSCH-----------HH---------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc---cCCCH-----------HH---------
Confidence 479999999999999998876431 124799999986531 11110 01
Q ss_pred CCCCCCHhHHHHcCcEEEeCCcEEEEecCCCEEE--ECCC----cEEEeccEEeccCCCCC
Q 010917 130 GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLI--TNSG----KLLKYGSLIVATGCTAS 184 (497)
Q Consensus 130 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~--~~~g----~~i~~d~lvlAtG~~~~ 184 (497)
.....+.+++.||++++++.|.+++.+...+. ..+| +++++|.+|+|+|..|.
T Consensus 275 --~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 275 --SSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp --HHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred --HHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 12346778899999999999999987654433 3455 36999999999997764
No 287
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.90 E-value=7.5e-05 Score=76.60 Aligned_cols=58 Identities=17% Similarity=0.260 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCC-c--EEEcC-EEEEeccCcC
Q 010917 259 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-S--TIDAD-TIVIGIGAKP 316 (497)
Q Consensus 259 ~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g-~--~i~~D-~vv~a~G~~p 316 (497)
.+...+.+.+++.||++++++.++++..++++++.+|...++ + ++.+| .||+|+|--.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 455566677788999999999999998765678877766543 2 58996 9999999654
No 288
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.89 E-value=5.2e-05 Score=81.26 Aligned_cols=37 Identities=24% Similarity=0.472 Sum_probs=33.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
...+||+|||||++|++||..|++.|+ +|+|+|+.+.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~ 370 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGI---KVTVLEAKDR 370 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEecccc
Confidence 346899999999999999999999998 8999999654
No 289
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.88 E-value=1.8e-05 Score=80.85 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=71.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhc------------cCHHHHHHHHHHHHHCCcEEEcCCeEEE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------FTPSLAQRYEQLYQQNGVKFVKGASIKN 283 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~------------~~~~~~~~~~~~l~~~GV~i~~~~~v~~ 283 (497)
..+|+|||+|+.|+.+|..|++. .+|+++++.+.+.... ...++...+.+.+ +.|++++.++.+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~ 185 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALG 185 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEE
Confidence 35799999999999999999999 9999999886542110 0122333333333 56999999999988
Q ss_pred EEeCCCCcEEEEEeCCCc--EEEcCEEEEeccCcCCCc
Q 010917 284 LEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~--~i~~D~vv~a~G~~p~~~ 319 (497)
+...+ ..+......+++ ++.+|.+|+|+|..|...
T Consensus 186 i~~~~-~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 186 VFDKG-EYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp CEECS-SSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EEcCC-cEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 87543 333223334554 689999999999988643
No 290
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.87 E-value=1.8e-05 Score=81.38 Aligned_cols=97 Identities=15% Similarity=0.245 Sum_probs=67.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++++|||||+.|+..|..|++.|. +|+++++....+ .+. .++ .....+.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~l~----~~d-----------~~~-----------~~~~~~~l 260 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGL---DVTVMVRSILLR----GFD-----------QDM-----------ANKIGEHM 260 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSST----TSC-----------HHH-----------HHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCC---eEEEEecccccc----cCC-----------HHH-----------HHHHHHHH
Confidence 4679999999999999999999987 899998742210 000 000 12345667
Q ss_pred HHcCcEEEeCCcEEEEecCC----C--EEE--ECCC-c--EEEeccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDIEK----Q--TLI--TNSG-K--LLKYGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~----~--~v~--~~~g-~--~i~~d~lvlAtG~~~~~ 185 (497)
++.||++++++.+..+.... . .+. ..++ + ++.+|.|++|+|..|..
T Consensus 261 ~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~ 317 (519)
T 3qfa_A 261 EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACT 317 (519)
T ss_dssp HHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccC
Confidence 88999999987766664321 2 232 2344 2 56899999999988753
No 291
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.86 E-value=3.7e-06 Score=89.08 Aligned_cols=35 Identities=31% Similarity=0.459 Sum_probs=32.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHH-----cCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVE-----HGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~-----~g~~~~~V~lie~~~~ 97 (497)
.+||+||||||+||++|..|++ .|+ +|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi---~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL---KVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC---CEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC---CEEEEeCCCC
Confidence 4799999999999999999999 888 8999999764
No 292
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.83 E-value=0.00012 Score=74.89 Aligned_cols=100 Identities=18% Similarity=0.263 Sum_probs=77.1
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh----------------------hc-----------------
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------------RL----------------- 255 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------------------~~----------------- 255 (497)
...+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+.. ..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 446799999999999999999999999999997632110 00
Q ss_pred -------------c-CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc---EEEcCEEEEeccCcC
Q 010917 256 -------------F-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 316 (497)
Q Consensus 256 -------------~-~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~---~i~~D~vv~a~G~~p 316 (497)
+ ...+...+.+.+++.|++++.++++++++.++++ + .+++.+++ ++.+|+||.|.|...
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEcCCCcEEEEeCEEEEccCccc
Confidence 0 1235566777788889999999999999876444 3 36666664 799999999999864
No 293
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.82 E-value=1.6e-05 Score=84.68 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=73.4
Q ss_pred CCCcEEEEc--CchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 59 ENREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 59 ~~~~VvIIG--gG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
..++|+||| ||..|+.+|..|++.|. +|+++++.+...-. ..+ ... ...+.
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~---~Vtlv~~~~~l~~~--------~~~-----~~~-----------~~~l~ 574 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGY---EVSIVTPGAQVSSW--------TNN-----TFE-----------VNRIQ 574 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTC---EEEEEESSSSTTGG--------GGG-----GTC-----------HHHHH
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCC---eeEEEecccccccc--------ccc-----chh-----------HHHHH
Confidence 456899999 99999999999999987 89999987642100 000 000 12345
Q ss_pred hHHHHcCcEEEeCCcEEEEecCCCEEEE---CCCcEEEeccEEeccCCCCC
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEKQTLIT---NSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~---~~g~~i~~d~lvlAtG~~~~ 184 (497)
+.+++.||+++.+++|.+++.+...+.. .+++++.+|.||+|+|..|.
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 6778899999999999999876655553 24567999999999998764
No 294
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.81 E-value=3e-05 Score=81.28 Aligned_cols=97 Identities=11% Similarity=0.211 Sum_probs=67.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||||+.|+.+|..|++.|. +|+++++.... +.+.. .+ .....+.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l----~~~d~-----------~~-----------~~~~~~~l 336 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGG---DVTVMVRSILL----RGFDQ-----------QM-----------AEKVGDYM 336 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSS----TTSCH-----------HH-----------HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---EEEEEECCcCc----CcCCH-----------HH-----------HHHHHHHH
Confidence 4689999999999999999999987 79999976211 00000 00 12234567
Q ss_pred HHcCcEEEeCCcEEEEec-------C--CCE--EE--ECCCcEEE--eccEEeccCCCCCc
Q 010917 140 KEKGIEMIYQDPVTSIDI-------E--KQT--LI--TNSGKLLK--YGSLIVATGCTASR 185 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~-------~--~~~--v~--~~~g~~i~--~d~lvlAtG~~~~~ 185 (497)
++.||++++++.+..+.. . ... +. ..+|+++. +|.||+|+|..|..
T Consensus 337 ~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 337 ENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp HHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECG
T ss_pred HhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 788999999877766632 1 122 22 35676555 99999999988763
No 295
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.81 E-value=6.9e-05 Score=74.58 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=72.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCc-EEEEecCCcchhh----------------------------------------
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLD-TTIIFPENHLLQR---------------------------------------- 254 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~-Vtlv~~~~~~~~~---------------------------------------- 254 (497)
..+|+|||+|+.|+.+|..|++.|.+ |+|+++.+.+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35799999999999999999999999 9999987542100
Q ss_pred --------------------ccCHHHHHHHHHHHHH-CC-cEEEcCCeEEEEEeCCCCcEEEEEeCC---C--cEEEcCE
Q 010917 255 --------------------LFTPSLAQRYEQLYQQ-NG-VKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADT 307 (497)
Q Consensus 255 --------------------~~~~~~~~~~~~~l~~-~G-V~i~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~~D~ 307 (497)
.....+.+.+.+.+.+ .| ++++++++|++++. +++ + .+.+.+ | +++.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v-~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-R-VLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-E-EEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-c-EEEEecCCCCCceEEecCE
Confidence 0001344555666655 35 68999999999986 444 3 355544 6 5799999
Q ss_pred EEEeccCcCC
Q 010917 308 IVIGIGAKPT 317 (497)
Q Consensus 308 vv~a~G~~p~ 317 (497)
||.|.|....
T Consensus 161 vV~AdG~~S~ 170 (410)
T 3c96_A 161 LVGADGIHSA 170 (410)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCccch
Confidence 9999998653
No 296
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.79 E-value=1.4e-05 Score=80.25 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=31.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
++++|+||||||+|+++|..|+++|+ +|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~---~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDV---DVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTC---EEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC---eEEEEcCCC
Confidence 45799999999999999999999998 899999976
No 297
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.77 E-value=0.00011 Score=81.20 Aligned_cols=102 Identities=16% Similarity=0.150 Sum_probs=72.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhcc-----------CHHHHHHHHHHHHHC-CcEEEcCCeEEE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLF-----------TPSLAQRYEQLYQQN-GVKFVKGASIKN 283 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~-----------~~~~~~~~~~~l~~~-GV~i~~~~~v~~ 283 (497)
..+|+|||+|+.|+.+|..|++.|.+|+|+++.+.+..... ..++...+.+.+.+. +|+++.+++|.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 45799999999999999999999999999998765421111 123444555556664 999999999988
Q ss_pred EEeCCCCcEEEEEe---------------CCCcEEEcCEEEEeccCcCCCc
Q 010917 284 LEAGSDGRVAAVKL---------------EDGSTIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 284 i~~~~~~~v~~v~~---------------~~g~~i~~D~vv~a~G~~p~~~ 319 (497)
+.. ++.+..+.. .++.++.+|.||+|+|..|...
T Consensus 208 i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~ 256 (965)
T 2gag_A 208 SYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPI 256 (965)
T ss_dssp EET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCC
T ss_pred eec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCC
Confidence 873 233222211 1123689999999999987643
No 298
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.77 E-value=0.00018 Score=74.07 Aligned_cols=55 Identities=16% Similarity=0.266 Sum_probs=44.3
Q ss_pred HHHHHHHHH-CCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 262 QRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 262 ~~~~~~l~~-~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+.+.+++ .|++++.+ +|++++..+++.+..|.+.+|+++.+|.||.|.|....
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 344555667 89999999 69999876566666788888878999999999999764
No 299
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.77 E-value=0.00014 Score=74.40 Aligned_cols=101 Identities=20% Similarity=0.218 Sum_probs=76.9
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh----------------------hc----------------
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------------RL---------------- 255 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------------------~~---------------- 255 (497)
....+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+.. ..
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 3456799999999999999999999999999997632100 00
Q ss_pred --------------c-CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCc---EEEcCEEEEeccCcC
Q 010917 256 --------------F-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 316 (497)
Q Consensus 256 --------------~-~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~---~i~~D~vv~a~G~~p 316 (497)
+ ...+.+.+.+.+++.|++++.++++++++.+++ .+ .+++.+++ ++.+|+||.|.|...
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GV-TVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECCCTTC
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eE-EEEEEcCCCCEEEEeCEEEECCCcch
Confidence 0 123556677777888999999999999987544 33 36666664 799999999999864
No 300
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.76 E-value=0.00016 Score=74.20 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=45.5
Q ss_pred HHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 262 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 262 ~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+.+.+++.|++++.+ +|++++.++++.+..|.+.+|+++.+|.||.|.|....
T Consensus 177 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 177 RYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 34556667789999999 99999876567777888899989999999999998754
No 301
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.76 E-value=0.00017 Score=71.24 Aligned_cols=59 Identities=24% Similarity=0.374 Sum_probs=42.5
Q ss_pred HHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchhhcC
Q 010917 263 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 325 (497)
Q Consensus 263 ~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~g 325 (497)
.+.+.+++.|++++.++.|++++.++ +.+ .+.+.++ ++.+|.||+|+|.... .++..++
T Consensus 158 ~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~v-~v~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g 216 (397)
T 2oln_A 158 ALFTLAQAAGATLRAGETVTELVPDA-DGV-SVTTDRG-TYRAGKVVLACGPYTN-DLLEPLG 216 (397)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEESSC-EEEEEEEEECCGGGHH-HHHGGGT
T ss_pred HHHHHHHHcCCEEECCCEEEEEEEcC-CeE-EEEECCC-EEEcCEEEEcCCcChH-HHhhhcC
Confidence 44555678899999999999998653 333 3666555 7999999999998643 3444444
No 302
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.75 E-value=2.2e-05 Score=76.77 Aligned_cols=37 Identities=16% Similarity=0.355 Sum_probs=33.5
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+.+++||+|||||++|+++|++|+++|+ +|+|+|++.
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~---~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGY---SVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCC---EEEEEeccC
Confidence 3456899999999999999999999987 899999975
No 303
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.74 E-value=1.2e-05 Score=81.61 Aligned_cols=40 Identities=25% Similarity=0.505 Sum_probs=34.1
Q ss_pred cEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccC
Q 010917 273 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 314 (497)
Q Consensus 273 V~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~ 314 (497)
+++++++.|++|+..+++ + .|++.+|+++.+|.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC-Y-SLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSS-E-EEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCe-E-EEEECCCCEEECCEEEECCCH
Confidence 799999999999876444 3 588899988999999999875
No 304
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.72 E-value=6.1e-05 Score=74.88 Aligned_cols=63 Identities=24% Similarity=0.254 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHCCcEEEcCCeEE---------EEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCCCcchh-hcCC
Q 010917 260 LAQRYEQLYQQNGVKFVKGASIK---------NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE-RVGL 326 (497)
Q Consensus 260 ~~~~~~~~l~~~GV~i~~~~~v~---------~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~~~~-~~gl 326 (497)
+...+.+.+++.|++++.+++|+ ++... ++.+ .|.+.+| ++.+|.||+|+|.... .++. .+++
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s~-~l~~~~~g~ 246 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAGP-ALVEQGLGL 246 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGHH-HHHHHHHCC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccHH-HHHHHhcCC
Confidence 44556677788999999999998 87643 3444 5666666 7999999999998643 3444 4443
No 305
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.72 E-value=0.00018 Score=78.34 Aligned_cols=55 Identities=27% Similarity=0.378 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcC
Q 010917 260 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 260 ~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p 316 (497)
+...+.+.+++.|++++.++.|++++.. ++.+..|.+.+| ++.+|.||+|+|...
T Consensus 153 l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 3445666778899999999999999864 455666778777 799999999999864
No 306
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.70 E-value=3.6e-05 Score=75.20 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=35.1
Q ss_pred cCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC-CCC
Q 010917 56 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE-AYA 98 (497)
Q Consensus 56 ~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~-~~~ 98 (497)
++...++|+|||||++||+||+.|++.|+ +|+|+|++ +..
T Consensus 40 ~~~~~~~V~IIGAGiaGL~aA~~L~~~G~---~V~VlE~~~~~v 80 (376)
T 2e1m_A 40 PPGPPKRILIVGAGIAGLVAGDLLTRAGH---DVTILEANANRV 80 (376)
T ss_dssp SCCSCCEEEEECCBHHHHHHHHHHHHTSC---EEEEECSCSSCC
T ss_pred CCCCCceEEEECCCHHHHHHHHHHHHCCC---cEEEEecccccc
Confidence 34557899999999999999999999998 89999998 543
No 307
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.70 E-value=1.7e-05 Score=88.10 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=71.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCcchhh--------ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEe
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQR--------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 286 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~~~~--------~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~ 286 (497)
+++|+|||+|+.|+.+|..|++.|. +|+++++.+.+... .+..+...+..+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 5789999999999999999999999 79999988654210 13445666667788999999999976631
Q ss_pred CCCCcEEEEEeCCCcEEEcCEEEEeccC-cCC
Q 010917 287 GSDGRVAAVKLEDGSTIDADTIVIGIGA-KPT 317 (497)
Q Consensus 287 ~~~~~v~~v~~~~g~~i~~D~vv~a~G~-~p~ 317 (497)
. .+.+.+++++.+|.||+|+|. +|.
T Consensus 264 ---~---~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ---N---EITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ---T---SBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred ---c---eEEhhhcCccCCCEEEEecCCCCCC
Confidence 1 133445556789999999998 575
No 308
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.70 E-value=1.4e-05 Score=80.86 Aligned_cols=91 Identities=14% Similarity=0.194 Sum_probs=68.8
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCcch--------hhc-cCHHHHHHHHHHHHHCCcEEEcCCeEEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLL--------QRL-FTPSLAQRYEQLYQQNGVKFVKGASIKN 283 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~~~-~~~~~~~~~~~~l~~~GV~i~~~~~v~~ 283 (497)
..++|+|||+|+.|+.+|..|++.| .+|+++++.+.+. +.. ...++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3578999999999999999999998 8999999887654 111 123456667788888999999987652
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcC
Q 010917 284 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 284 i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p 316 (497)
. .|.+.+ .++.+|.||+|+|..|
T Consensus 84 ------~---~V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R---DVTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T---TBCHHH-HHHHSSEEEECCCCCE
T ss_pred ------e---EEEecc-ceEEcCEEEEecCcCC
Confidence 1 133333 2478999999999985
No 309
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.66 E-value=6.4e-05 Score=79.84 Aligned_cols=47 Identities=19% Similarity=0.300 Sum_probs=37.6
Q ss_pred HhHHHHcCcEEEeCCcEEEEecCCCEEEE-CCC--cEEEeccEEeccCCCCC
Q 010917 136 PEWYKEKGIEMIYQDPVTSIDIEKQTLIT-NSG--KLLKYGSLIVATGCTAS 184 (497)
Q Consensus 136 ~~~~~~~~v~~~~~~~v~~i~~~~~~v~~-~~g--~~i~~d~lvlAtG~~~~ 184 (497)
.+.+++.||++++++++..++.+. +.+ .+| +++.+|.||+|+|..|.
T Consensus 580 ~~~l~~~GV~v~~~~~v~~i~~~~--v~~~~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 580 RTTLLSRGVKMIPGVSYQKIDDDG--LHVVINGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHTTCEEECSCEEEEEETTE--EEEEETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHHhcCCEEEeCcEEEEEeCCe--EEEecCCeEEEEeCCEEEECCCcccc
Confidence 456788899999999999998543 444 566 57999999999998764
No 310
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.65 E-value=4.4e-05 Score=76.34 Aligned_cols=53 Identities=17% Similarity=0.274 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 260 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 260 ~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
+.....+..++.+.++++++.|++|+.. ++.+ .|.+.+|+ +.+|.||+|++..
T Consensus 205 ~~~l~~~l~~~l~~~v~~~~~V~~i~~~-~~~v-~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 205 TQAMFEHLNATLEHPAERNVDITRITRE-DGKV-HIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp HHHHHHHHHHHSSSCCBCSCCEEEEECC-TTCE-EEEESSCE-EEESEEEECSCHH
T ss_pred HHHHHHHHHHhhcceEEcCCEEEEEEEE-CCEE-EEEECCCe-EEcCEEEECCCHH
Confidence 4444455555666788999999999865 4444 37787775 8999999999864
No 311
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.63 E-value=3.8e-05 Score=78.08 Aligned_cols=54 Identities=30% Similarity=0.467 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccC
Q 010917 259 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 314 (497)
Q Consensus 259 ~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~ 314 (497)
.+.+.+.+.+++.|++|++++.|++|+..+++. ..|.+ ++.++.+|.||+|++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~-~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGC-EEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCce-EEEEE-CCeEEEcCEEEECCCH
Confidence 567788888999999999999999998654432 34555 5557999999999875
No 312
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.63 E-value=1.4e-05 Score=80.60 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=67.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHh-C------CCcEEEEecCCcchhh---------ccCHHHHHHHHHHHHHCCcEEEcCC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVG-W------KLDTTIIFPENHLLQR---------LFTPSLAQRYEQLYQQNGVKFVKGA 279 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~-~------g~~Vtlv~~~~~~~~~---------~~~~~~~~~~~~~l~~~GV~i~~~~ 279 (497)
.++|+|||+|+.|+.+|..|.+ . +.+|+++++.+.+... ....++...+.+.+++.||+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999999 7 8999999998654321 1123456677777888899999885
Q ss_pred eEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 280 SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 280 ~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
.+ + . .|.+.++ ++.+|.||+|+|..
T Consensus 83 ~v-----~--~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV-----G--E---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB-----T--T---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EE-----C--C---EEEECCC-eEeCCEEEEeeCCC
Confidence 43 1 1 1344444 47899999999997
No 313
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.62 E-value=5e-05 Score=76.71 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCC-CCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGS-DGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~-~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+.+.+.+.+++.|+++++++.|++|.... ++++..|.+ +|+++.||.||+++|..+.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4677888888999999999999999998642 566666776 5788999999999998764
No 314
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.61 E-value=3e-05 Score=79.75 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=33.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcC-CCCCcEEEEcCCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAP 99 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g-~~~~~V~lie~~~~~~ 99 (497)
..+||+|||||+|||+||..|++.| + +|+|+|+++...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~---~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQ---DCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCC---SEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCC---CEEEEeCCCCCC
Confidence 3479999999999999999999998 7 899999987643
No 315
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.60 E-value=5.5e-05 Score=75.02 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=34.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAP 99 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~~V~lie~~~~~~ 99 (497)
.++||+|||||++||+||..|++. |+ +|+|+|+++...
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~---~v~v~E~~~~~G 44 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDK---RVLVLERRPHIG 44 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCC---CEEEECSSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCC---CEEEEeCCCCCC
Confidence 368999999999999999999999 87 899999997653
No 316
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.59 E-value=5.6e-05 Score=77.15 Aligned_cols=38 Identities=18% Similarity=0.376 Sum_probs=34.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
+..+||+|||||+|||+||+.|++.|+ +|+|+|+.+..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~---~v~v~E~~~~~ 46 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGY---KVTVLEARTRP 46 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeccCCC
Confidence 446799999999999999999999997 89999998764
No 317
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.59 E-value=3.2e-05 Score=78.11 Aligned_cols=36 Identities=22% Similarity=0.418 Sum_probs=33.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
++||+|||||++||+||..|++.|+ +|+|+|+++..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~ 40 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGL---SVAVIEARDRV 40 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---cEEEEECCCCC
Confidence 4799999999999999999999988 79999998764
No 318
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.56 E-value=6.6e-05 Score=73.93 Aligned_cols=39 Identities=26% Similarity=0.441 Sum_probs=34.6
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
....+||+|||||++|++||..|++.|+ +|+|+|+.+..
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~ 64 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQ---RVLIVDRRPHI 64 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCC---ceEEEeccCCC
Confidence 3456899999999999999999999987 89999998764
No 319
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.54 E-value=5.5e-05 Score=81.03 Aligned_cols=98 Identities=19% Similarity=0.216 Sum_probs=70.1
Q ss_pred CCCcEEEEc--CchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 59 ENREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 59 ~~~~VvIIG--gG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
..++|+||| ||..|+.+|..|++.|. +|+++++.+ ..-. ...+.. .....
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~---~Vtlv~~~~-l~~~-------~~~~~~-----------------~~~~~ 578 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGH---EVTIVSGVH-LANY-------MHFTLE-----------------YPNMM 578 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTC---EEEEEESSC-TTHH-------HHHTTC-----------------HHHHH
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCC---EEEEEeccc-cccc-------cccccc-----------------HHHHH
Confidence 357999999 99999999999999987 899999876 2100 000000 01234
Q ss_pred hHHHHcCcEEEeCCcEEEEecCCCEEEE--CCC-cE------------------EEeccEEeccCCCCC
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEKQTLIT--NSG-KL------------------LKYGSLIVATGCTAS 184 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~--~~g-~~------------------i~~d~lvlAtG~~~~ 184 (497)
+.+++.||+++.++.+.+++.+...+.. .++ +. +.+|.||+|+|..|.
T Consensus 579 ~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 579 RRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp HHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred HHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 5678889999999999999865433332 232 32 899999999998765
No 320
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.53 E-value=0.00053 Score=70.06 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEeccCcCC
Q 010917 260 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKPT 317 (497)
Q Consensus 260 ~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vv~a~G~~p~ 317 (497)
+...+.+.+++.|++++.+++|+++..++ .+..|.+ .+|+ ++.+|.||.|+|...+
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 34455666788999999999999998643 4456666 3565 7999999999998653
No 321
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.51 E-value=0.00041 Score=70.27 Aligned_cols=98 Identities=17% Similarity=0.249 Sum_probs=70.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh-------------h------------------------------
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-------------R------------------------------ 254 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------~------------------------------ 254 (497)
.|+|||+|..|+-+|..|++.|.+|+++++...-.. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 489999999999999999999999999987610000 0
Q ss_pred -----------------------------------ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC-
Q 010917 255 -----------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE- 298 (497)
Q Consensus 255 -----------------------------------~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~- 298 (497)
.....+...+.+.+++.||+++.++.+ ++..+ ++++.++...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEe
Confidence 000123445556667789999999999 98754 5666566543
Q ss_pred CCcEEEcCEEEEeccCcCC
Q 010917 299 DGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 299 ~g~~i~~D~vv~a~G~~p~ 317 (497)
++.++.+|.||+|+|..+.
T Consensus 159 ~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp TEEECCCSEEEECCCCCGG
T ss_pred CCCeEEeeeEEECCCCCcc
Confidence 2335789999999998764
No 322
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.49 E-value=7.4e-05 Score=73.58 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=31.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 98 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~--g~~~~~V~lie~~~~~ 98 (497)
.||+|||||++|+++|..|++. |+ +|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~---~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW---AIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS---EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC---CEEEEECCCCC
Confidence 3899999999999999999999 87 89999998654
No 323
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.49 E-value=0.00098 Score=69.40 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=39.8
Q ss_pred HHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEeccCc
Q 010917 264 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAK 315 (497)
Q Consensus 264 ~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vv~a~G~~ 315 (497)
+.+.+++.||+++.++.++++..++++++.++.. .+|+ ++.++.||+|+|..
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 4455567899999999999998643567766654 4565 68999999999963
No 324
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.47 E-value=7.7e-05 Score=76.86 Aligned_cols=44 Identities=23% Similarity=0.244 Sum_probs=34.6
Q ss_pred HH-cCcEEEeCCcEEEEecCC--C--EEEECCCcEEEeccEEeccCCCCC
Q 010917 140 KE-KGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 140 ~~-~~v~~~~~~~v~~i~~~~--~--~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
.+ .|++++.+ +|++++.+. . .+.+++|.++.+|.||.|+|....
T Consensus 186 ~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 186 TQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 45 79999998 699987542 2 466777777999999999998643
No 325
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.46 E-value=8.4e-05 Score=75.50 Aligned_cols=38 Identities=24% Similarity=0.183 Sum_probs=33.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
++||+|||||++||+||+.|+++|. +.+|+|+|+++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~-~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFP-DLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCT-TSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCC-CCCEEEEECCCCC
Confidence 5799999999999999999999992 2389999997654
No 326
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.46 E-value=8.3e-05 Score=75.58 Aligned_cols=38 Identities=18% Similarity=0.276 Sum_probs=32.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
...+||+|||||++||+||..|+++|+ +|+|+|+++..
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~---~v~v~E~~~~~ 51 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGT---DAVLLESSARL 51 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTC---CEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCC
Confidence 346799999999999999999999998 89999998754
No 327
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.43 E-value=0.00012 Score=70.86 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=32.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
++||+|||||+||+.||..|++.|+ +|+|+|+.+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~---~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGV---PVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 3699999999999999999999998 8999998763
No 328
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.41 E-value=4e-05 Score=82.80 Aligned_cols=38 Identities=21% Similarity=0.389 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
...++|+|||||++||+||..|+++|+ +|+|+|+.+..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~---~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEecCcC
Confidence 456899999999999999999999998 89999998754
No 329
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.40 E-value=0.00011 Score=75.22 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=33.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
..+||+|||||++||+||..|+++|+ +|+|+|+.+..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGL---NVTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSC---EEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEeCCCC
Confidence 45899999999999999999999998 89999998765
No 330
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.40 E-value=8.3e-05 Score=72.26 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=30.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCC---CCCcEEEEcCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGM---ADGRLCIVSKEA 96 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~---~~~~V~lie~~~ 96 (497)
.||+|||||++|+++|++|+++|. +..+|+|+|++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 389999999999999999999971 023899999985
No 331
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.39 E-value=0.00013 Score=74.46 Aligned_cols=39 Identities=23% Similarity=0.331 Sum_probs=34.6
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
...+++|+|||||++||+||..|+++|+ +|+|+|+.+..
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~~g~---~v~vlE~~~~~ 68 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAGAGH---QVTVLEASERP 68 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTC---EEEEECSSSSS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCC
Confidence 3446899999999999999999999998 89999998654
No 332
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.38 E-value=0.00015 Score=73.78 Aligned_cols=38 Identities=21% Similarity=0.177 Sum_probs=33.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcC-CCCCcEEEEcCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYA 98 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g-~~~~~V~lie~~~~~ 98 (497)
.++++|+|||||++||+||+.|+++| . +|+|+|+++..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~---~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYK---NWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCC---SEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCC---CEEEEeCCCCC
Confidence 34589999999999999999999998 4 89999998764
No 333
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.38 E-value=0.00012 Score=74.65 Aligned_cols=56 Identities=21% Similarity=0.350 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHCC-cEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 258 PSLAQRYEQLYQQNG-VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 258 ~~~~~~~~~~l~~~G-V~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
..+.+.+.+.+++.| +++++++.|++|+..++ .+ .|++.+|+++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-AA-RVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-SE-EEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-EE-EEEECCCCEEEcCEEEECCCHH
Confidence 356777888888888 99999999999986543 33 5778888889999999999963
No 334
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.37 E-value=0.00012 Score=72.08 Aligned_cols=88 Identities=15% Similarity=0.185 Sum_probs=68.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcc----------------------h-hh-----------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL----------------------L-QR----------------- 254 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~~~----------------------~-~~----------------- 254 (497)
.+|+|||+|+.|+.+|..|++. |.+|+|+++.+.+ . ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3699999999999999999999 9999999987543 0 00
Q ss_pred --------------ccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 255 --------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 255 --------------~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
....++.+.+.+.+++.|++++++++|++++.. +++.+|.||.|.|....
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCch
Confidence 011356677778888889999999998877521 13679999999998653
No 335
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.36 E-value=0.00079 Score=70.97 Aligned_cols=100 Identities=19% Similarity=0.267 Sum_probs=73.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-CCCcEEEEecCCcchh------------------------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPENHLLQ------------------------------------------ 253 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~~~------------------------------------------ 253 (497)
.+|+|||+|+.|+-+|..|++ .|.+|+|+++.+.+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 469999999999999999999 9999999997632100
Q ss_pred --h---------------------ccC-HHHHHHHHHHHHHCCc--EEEcCCeEEEEEeCCC--CcEEEEEeC------C
Q 010917 254 --R---------------------LFT-PSLAQRYEQLYQQNGV--KFVKGASIKNLEAGSD--GRVAAVKLE------D 299 (497)
Q Consensus 254 --~---------------------~~~-~~~~~~~~~~l~~~GV--~i~~~~~v~~i~~~~~--~~v~~v~~~------~ 299 (497)
. .++ ..+...+.+.+++.|+ +++.++++++++.+++ +....+++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 000 2455667778888877 9999999999987542 212234443 4
Q ss_pred C--cEEEcCEEEEeccCcC
Q 010917 300 G--STIDADTIVIGIGAKP 316 (497)
Q Consensus 300 g--~~i~~D~vv~a~G~~p 316 (497)
| +++.+|.||.|.|...
T Consensus 193 G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TCEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCcch
Confidence 5 5799999999999753
No 336
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.33 E-value=0.0011 Score=69.31 Aligned_cols=97 Identities=20% Similarity=0.246 Sum_probs=70.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCcchhh-------------------------------cc-------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQR-------------------------------LF------- 256 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~~~-------------------------------~~------- 256 (497)
-.|+|||+|..|+-+|..|++.| .+|+|+++.+..... ..
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 36999999999999999999999 999999976321000 00
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHHCC-cEEEcCCeEEEEEeCC
Q 010917 257 -----------------------------------------------TPSLAQRYEQLYQQNG-VKFVKGASIKNLEAGS 288 (497)
Q Consensus 257 -----------------------------------------------~~~~~~~~~~~l~~~G-V~i~~~~~v~~i~~~~ 288 (497)
+..+...+.+.+++.| |+++.++.++++..+
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~- 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD- 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-
Confidence 0123334445556678 999999999999754
Q ss_pred CCcEEEEEe---CCCc--EEEcCEEEEeccC
Q 010917 289 DGRVAAVKL---EDGS--TIDADTIVIGIGA 314 (497)
Q Consensus 289 ~~~v~~v~~---~~g~--~i~~D~vv~a~G~ 314 (497)
++++.++.. .+|+ ++.++.||+|+|.
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 566655543 5676 6999999999994
No 337
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.32 E-value=0.00014 Score=71.21 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=32.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
+||+|||||++|+++|..|++.|+ +|+|+|+++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNK---KVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTC---CEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---cEEEEecCCCC
Confidence 589999999999999999999987 89999998754
No 338
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.31 E-value=0.00017 Score=71.01 Aligned_cols=37 Identities=22% Similarity=0.444 Sum_probs=33.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 99 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 99 (497)
+.+|+|||||++|+++|..|++.|+ +|+|+|+++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGH---QVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---cEEEEEecCCcC
Confidence 3699999999999999999999987 899999987653
No 339
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.18 E-value=0.00098 Score=68.64 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=30.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 250 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 250 (497)
-.|+|||+|..|+-+|..|++ |.+|+|+++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 469999999999999999999 999999998753
No 340
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.17 E-value=0.0021 Score=66.48 Aligned_cols=95 Identities=19% Similarity=0.303 Sum_probs=67.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh-------------------------------------------
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------- 253 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------- 253 (497)
.+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 4799999999999999999999999999997643210
Q ss_pred -h-c---c---------------------C-HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC---C--c
Q 010917 254 -R-L---F---------------------T-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--S 301 (497)
Q Consensus 254 -~-~---~---------------------~-~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~---g--~ 301 (497)
. . + + ..+.+.+.+.+++. +++++++++++.++++ + .+++.+ | +
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-RATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-EEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-EEEEEECCCCCEE
Confidence 0 0 0 0 12334455555554 8889999999876444 3 244443 6 4
Q ss_pred EEEcCEEEEeccCcC
Q 010917 302 TIDADTIVIGIGAKP 316 (497)
Q Consensus 302 ~i~~D~vv~a~G~~p 316 (497)
++.+|.||.|.|...
T Consensus 182 ~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 182 AVHARYLVACDGASS 196 (549)
T ss_dssp EEEEEEEEECCCTTC
T ss_pred EEEeCEEEECCCCCc
Confidence 799999999999754
No 341
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.17 E-value=0.00036 Score=69.93 Aligned_cols=58 Identities=17% Similarity=0.350 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
..+.+.+.+.+++.|+++++++.|++|... ++++..+. .+|+++.||.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 467778888888999999999999999864 56665555 47888999999999998764
No 342
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.15 E-value=0.0032 Score=65.31 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=38.8
Q ss_pred HHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeC---CCc--EEEcCEEEEeccCcC
Q 010917 264 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKP 316 (497)
Q Consensus 264 ~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~---~g~--~i~~D~vv~a~G~~p 316 (497)
+.+..++.|++++.+++|+++... ++.+..|.+. +|+ ++.+|.||.|+|...
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 334456789999999999999865 4566566653 343 799999999999753
No 343
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.13 E-value=0.00032 Score=72.88 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=32.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
..+||+|||||++|+++|+.|+++|+ +|+|+|+++
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~---~V~LlE~~~ 65 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGI---KTGLIEMQD 65 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCC
Confidence 46899999999999999999999998 899999975
No 344
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.10 E-value=0.00043 Score=73.30 Aligned_cols=39 Identities=21% Similarity=0.384 Sum_probs=34.8
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
....++|+|||||++|++||..|++.|+ +|+|+|+.+..
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~ 142 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRV 142 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTC---EEEEECSSSSS
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEecCCCC
Confidence 3456899999999999999999999998 89999998654
No 345
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.05 E-value=0.00044 Score=69.55 Aligned_cols=58 Identities=16% Similarity=0.315 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccCc
Q 010917 258 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 258 ~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~~ 315 (497)
.++.+.+.+.+++.|+++++++.|++|..++++++.+|.+.+|+++.||.||++.++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4678888899999999999999999998645778889999999999999999999988
No 346
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.00 E-value=0.0037 Score=65.32 Aligned_cols=51 Identities=20% Similarity=0.180 Sum_probs=37.8
Q ss_pred HHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEeccCcC
Q 010917 265 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKP 316 (497)
Q Consensus 265 ~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vv~a~G~~p 316 (497)
.+.+.+.||+++.++.+.++..+ ++++.++.. .+|+ .+.++.||+|+|...
T Consensus 162 ~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 162 YGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 33345578999999999998753 567666655 4665 689999999999643
No 347
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.98 E-value=0.00099 Score=68.15 Aligned_cols=49 Identities=18% Similarity=0.332 Sum_probs=37.9
Q ss_pred HHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccC
Q 010917 262 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 314 (497)
Q Consensus 262 ~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~ 314 (497)
+.+.+.+++.|+++++++.|++|..+ ++ .+++.+|+++.+|.||+++..
T Consensus 226 ~~l~~~l~~~g~~i~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 226 IAVANTLPKEKTRFGEKGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHTSCGGGEEESGGGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHhcCeeeecceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCH
Confidence 33444456678999999999999853 33 367899999999999998754
No 348
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.96 E-value=0.00052 Score=72.33 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=32.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHH---H-cCCCCCcEEEEcCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFV---E-HGMADGRLCIVSKEAY 97 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~---~-~g~~~~~V~lie~~~~ 97 (497)
..+||||||||+|||+||..|+ + .|. +|+||||.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~---~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGL---KVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTC---CEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCC---eEEEEeCcCC
Confidence 3579999999999999999999 5 787 8999999864
No 349
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.85 E-value=0.0058 Score=61.50 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=32.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC------CcEEEEecCCcc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWK------LDTTIIFPENHL 251 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g------~~Vtlv~~~~~~ 251 (497)
++|+|||+|.+|+-+|..|++.| .+|+|+++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 57999999999999999999999 899999987654
No 350
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.85 E-value=0.0069 Score=63.72 Aligned_cols=50 Identities=18% Similarity=0.176 Sum_probs=37.3
Q ss_pred HHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEeccCc
Q 010917 265 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAK 315 (497)
Q Consensus 265 ~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~~D~vv~a~G~~ 315 (497)
.+.+.+.||+++.++.+.++... ++++.++.. .+|+ .+.++.||+|+|-.
T Consensus 165 ~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 165 ANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 34445678999999999998753 566666654 4665 58999999999853
No 351
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.78 E-value=0.0011 Score=67.02 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=34.6
Q ss_pred CcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccC
Q 010917 272 GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 314 (497)
Q Consensus 272 GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~ 314 (497)
|.++++++.|++|+..++ .+ .|++.+|+++.+|.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPG-GV-TVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECSS-CE-EEEETTSCEEEESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcCC-cE-EEEECCCCEEEcCEEEEecCH
Confidence 678999999999987544 44 488899989999999999875
No 352
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.78 E-value=0.00055 Score=72.09 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=32.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcC--------CCCCcEEEEcCCC-CC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHG--------MADGRLCIVSKEA-YA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g--------~~~~~V~lie~~~-~~ 98 (497)
.++|+|||||++||+||+.|++.| + +|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~---~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGI---DVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEE---EEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCc---eEEEEeccCccc
Confidence 478999999999999999999988 5 899999987 54
No 353
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.74 E-value=0.0078 Score=64.48 Aligned_cols=42 Identities=17% Similarity=0.365 Sum_probs=34.9
Q ss_pred CCcEEEcCCeEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEeccC
Q 010917 271 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 314 (497)
Q Consensus 271 ~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g~~i~~D~vv~a~G~ 314 (497)
.|++|++++.|++|+..+++ + .|++.+|+++.+|.||+|+..
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCH
Confidence 47899999999999865444 3 578889989999999999864
No 354
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.73 E-value=0.0011 Score=68.55 Aligned_cols=64 Identities=16% Similarity=0.272 Sum_probs=46.9
Q ss_pred HHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC---Cc--EE---EcCEEEEeccCcCCCcchhhcCCc
Q 010917 263 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TI---DADTIVIGIGAKPTVSPFERVGLN 327 (497)
Q Consensus 263 ~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i---~~D~vv~a~G~~p~~~~~~~~gl~ 327 (497)
++....++.|+++++++.|++|..+ ++++.+|.+.+ |+ ++ .++.||+|+|.-....++..+|+.
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 4444444469999999999999864 56788888865 53 34 889999999986555666666653
No 355
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.72 E-value=0.0059 Score=64.48 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=29.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-----CCCcEEEEecC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVG-----WKLDTTIIFPE 248 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~-----~g~~Vtlv~~~ 248 (497)
..|+|||+|+.|+-+|..|++ .|.+|+|+++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 369999999999999999999 99999999976
No 356
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.66 E-value=0.0036 Score=59.91 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=53.6
Q ss_pred CCcEEEEcCchHHHH-HHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 60 NREFVIVGGGNAAGY-AARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~-aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
+++|.|||.|.+|++ +|..|.++|+ +|++.|.....+ ..+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~---~V~~~D~~~~~~-----------------------------------~~~~ 45 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGF---EVSGCDAKMYPP-----------------------------------MSTQ 45 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTC---EEEEEESSCCTT-----------------------------------HHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCC---EEEEEcCCCCcH-----------------------------------HHHH
Confidence 479999999999997 7889999998 899999864310 1345
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+++.|+++..+.. ++. +.. ..+|.||+.+|..+.
T Consensus 46 L~~~gi~v~~g~~-----~~~----l~~---~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 46 LEALGIDVYEGFD-----AAQ----LDE---FKADVYVIGNVAKRG 79 (326)
T ss_dssp HHHTTCEEEESCC-----GGG----GGS---CCCSEEEECTTCCTT
T ss_pred HHhCCCEEECCCC-----HHH----cCC---CCCCEEEECCCcCCC
Confidence 6778999887632 111 000 147999999997654
No 357
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.65 E-value=0.0038 Score=62.72 Aligned_cols=133 Identities=13% Similarity=0.171 Sum_probs=78.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
..++|+|||.|.+|+++|+.|+++|+ +|++.|..+.. . ....+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~---~V~~~D~~~~~---~------------------------------~~~~~~ 51 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGA---IVTVNDGKPFD---E------------------------------NPTAQS 51 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTC---EEEEEESSCGG---G------------------------------CHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC---EEEEEeCCccc---C------------------------------ChHHHH
Confidence 45899999999999999999999998 89999986420 0 012345
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEECCCcEEE-eccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCC
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLK-YGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 217 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~-~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~ 217 (497)
+++.|+++..+... +.. + -. +|.||+++|..+. .|........|+..+. +.+-+.. +...+
T Consensus 52 L~~~gi~~~~g~~~-----~~~---~-----~~~~d~vv~spgi~~~-~p~~~~a~~~gi~v~~---~~e~~~~-~~~~~ 113 (451)
T 3lk7_A 52 LLEEGIKVVCGSHP-----LEL---L-----DEDFCYMIKNPGIPYN-NPMVKKALEKQIPVLT---EVELAYL-VSESQ 113 (451)
T ss_dssp HHHTTCEEEESCCC-----GGG---G-----GSCEEEEEECTTSCTT-SHHHHHHHHTTCCEEC---HHHHHHH-HCCSE
T ss_pred HHhCCCEEEECCCh-----HHh---h-----cCCCCEEEECCcCCCC-ChhHHHHHHCCCcEEe---HHHHHHH-hcCCC
Confidence 77889999877431 110 0 12 7999999998654 2321111112333332 2222222 22334
Q ss_pred eEEEEcC-CH--HHHHHHHHHHhCCCcEEEE
Q 010917 218 KVVVVGG-GY--IGMEVAAAAVGWKLDTTII 245 (497)
Q Consensus 218 ~vvVvG~-G~--~g~e~A~~l~~~g~~Vtlv 245 (497)
-|.|=|+ |- +.--++..|...|.++.+.
T Consensus 114 ~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~~ 144 (451)
T 3lk7_A 114 LIGITGSNGKTTTTTMIAEVLNAGGQRGLLA 144 (451)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 4555553 32 3344556677778776443
No 358
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.54 E-value=0.012 Score=62.01 Aligned_cols=50 Identities=14% Similarity=0.187 Sum_probs=36.7
Q ss_pred HHHHC-Cc-EEEcCCeEEEEEeCCC--CcEEEEEe---CCCc--EEEcCEEEEeccCcC
Q 010917 267 LYQQN-GV-KFVKGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTIVIGIGAKP 316 (497)
Q Consensus 267 ~l~~~-GV-~i~~~~~v~~i~~~~~--~~v~~v~~---~~g~--~i~~D~vv~a~G~~p 316 (497)
.+++. || +++.++.+.++..+++ +++.++.. .+|+ .+.++.||+|+|...
T Consensus 160 ~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 160 AAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 33455 89 9999999999876433 27776653 5665 689999999999643
No 359
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.44 E-value=0.0011 Score=68.28 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=42.0
Q ss_pred HHHCCcEEEcCCeEEEEEeCCC--CcEEEEEeC--CCc--EE---EcCEEEEeccCcCCCcchhhcCC
Q 010917 268 YQQNGVKFVKGASIKNLEAGSD--GRVAAVKLE--DGS--TI---DADTIVIGIGAKPTVSPFERVGL 326 (497)
Q Consensus 268 l~~~GV~i~~~~~v~~i~~~~~--~~v~~v~~~--~g~--~i---~~D~vv~a~G~~p~~~~~~~~gl 326 (497)
.++.|+++++++.|+++..+++ +++.+|... +|+ ++ .++.||+|+|.-.+..++..+|+
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 4678999999999999986543 478788774 454 34 57899999997544455554443
No 360
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.34 E-value=0.0031 Score=57.98 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=31.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
.|+|||+|+.|+-+|..|++.|.+|+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999988765
No 361
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.33 E-value=0.002 Score=66.65 Aligned_cols=37 Identities=32% Similarity=0.430 Sum_probs=32.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
..+|+||||||.||+.+|.+|++.+ ..+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~--~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENP--NVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTST--TSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCC--CCcEEEEecCCC
Confidence 4589999999999999999999986 238999999875
No 362
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.25 E-value=0.0022 Score=65.87 Aligned_cols=57 Identities=19% Similarity=0.372 Sum_probs=41.0
Q ss_pred HHCCcEEEcCCeEEEEEeCCCCcEEEEEeCCC---cEEEcCEEEEeccCcCCCcchhhcCC
Q 010917 269 QQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVSPFERVGL 326 (497)
Q Consensus 269 ~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~g---~~i~~D~vv~a~G~~p~~~~~~~~gl 326 (497)
...++++..++.+.++... ++++.++...+. .++.++.||+|.|.--...+|..+|+
T Consensus 222 ~r~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SGi 281 (526)
T 3t37_A 222 GRKNLTILTGSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSGI 281 (526)
T ss_dssp TCTTEEEECSCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred CCCCeEEEeCCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhccC
Confidence 4568999999999999754 566666655332 35778999999997654456665554
No 363
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.21 E-value=0.019 Score=58.38 Aligned_cols=61 Identities=16% Similarity=0.186 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCC------cEEEEEeCCC-----cEEEcCEEEEeccCcCCCc
Q 010917 259 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG------RVAAVKLEDG-----STIDADTIVIGIGAKPTVS 319 (497)
Q Consensus 259 ~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~------~v~~v~~~~g-----~~i~~D~vv~a~G~~p~~~ 319 (497)
++.++++...++.+..+.++++|++++..+++ ....|+..++ +++.++.||+|+|..|+..
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCC
Confidence 46667776667777788999999999764332 1234554433 3688999999999988754
No 364
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.08 E-value=0.012 Score=61.97 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=29.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC------CCcEEEEecC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGW------KLDTTIIFPE 248 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~------g~~Vtlv~~~ 248 (497)
-.|+|||+|..|+-+|..|++. |.+|+|+++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3699999999999999999997 9999999874
No 365
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.06 E-value=0.0053 Score=61.61 Aligned_cols=82 Identities=22% Similarity=0.141 Sum_probs=60.4
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 294 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~ 294 (497)
.+++|.|+|.|.+|+.+|..|.++|.+|++.+..+.- .++ ..+.|++.||+++.+....++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~----~~~-----~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFD----ENP-----TAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGG----GCH-----HHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCccc----CCh-----HHHHHHhCCCEEEECCChHHh----------
Confidence 5789999999999999999999999999999876521 111 234678889999877531100
Q ss_pred EEeCCCcEEEcCEEEEeccCcCCCcch
Q 010917 295 VKLEDGSTIDADTIVIGIGAKPTVSPF 321 (497)
Q Consensus 295 v~~~~g~~i~~D~vv~a~G~~p~~~~~ 321 (497)
+. + .+|.||+++|..++.+.+
T Consensus 69 --~~-~---~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 69 --LD-E---DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp --GG-S---CEEEEEECTTSCTTSHHH
T ss_pred --hc-C---CCCEEEECCcCCCCChhH
Confidence 00 0 168999999998877653
No 366
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.03 E-value=0.0035 Score=64.88 Aligned_cols=78 Identities=15% Similarity=0.291 Sum_probs=50.9
Q ss_pred HHHHHHHHHCCcEEEcCCeEEEEEeCC---CCcEEEEEeC--CCc--EEEcC-EEEEeccCcCCCcc-----------hh
Q 010917 262 QRYEQLYQQNGVKFVKGASIKNLEAGS---DGRVAAVKLE--DGS--TIDAD-TIVIGIGAKPTVSP-----------FE 322 (497)
Q Consensus 262 ~~~~~~l~~~GV~i~~~~~v~~i~~~~---~~~v~~v~~~--~g~--~i~~D-~vv~a~G~~p~~~~-----------~~ 322 (497)
.++...+++.|+++++++.|++|.-+. ++++++|++. +|+ ++.+. -||+|.|.--...+ |+
T Consensus 231 ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~ 310 (583)
T 3qvp_A 231 EWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILE 310 (583)
T ss_dssp HHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHG
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHH
Confidence 344444567899999999999987542 5678888764 564 56776 69999997533344 34
Q ss_pred hcCCcccCCCEEecCCCC
Q 010917 323 RVGLNSSVGGIQVDGQFR 340 (497)
Q Consensus 323 ~~gl~~~~g~i~vd~~~~ 340 (497)
.+|+++-..-. |-++|+
T Consensus 311 ~~GI~vv~dLP-VG~NLq 327 (583)
T 3qvp_A 311 PLGIDTVVDLP-VGLNLQ 327 (583)
T ss_dssp GGTCCCSBCCC-TTCCBB
T ss_pred hCCCCceeeCc-cccchh
Confidence 44554422234 666665
No 367
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.02 E-value=0.0048 Score=62.97 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=42.5
Q ss_pred HHHC-CcEEEcCCeEEEEEeCCCC-cEEEEEeC--CC-----cEEEcCEEEEeccCcCCCcchhhcC
Q 010917 268 YQQN-GVKFVKGASIKNLEAGSDG-RVAAVKLE--DG-----STIDADTIVIGIGAKPTVSPFERVG 325 (497)
Q Consensus 268 l~~~-GV~i~~~~~v~~i~~~~~~-~v~~v~~~--~g-----~~i~~D~vv~a~G~~p~~~~~~~~g 325 (497)
..++ ++++++++.|++|..++++ ++.+|... +| .++.++.||+|+|.-....++..+|
T Consensus 231 a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 231 ALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp HHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 3455 5999999999999865434 77888774 56 3688999999999754445555544
No 368
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.91 E-value=0.0061 Score=62.22 Aligned_cols=63 Identities=10% Similarity=0.133 Sum_probs=43.9
Q ss_pred HHHHHHHHCCcEEEcCCeEEEEEeCCCC-cEEEEEeC--CC-----cEEEcCEEEEeccCcCCCcchhhcC
Q 010917 263 RYEQLYQQNGVKFVKGASIKNLEAGSDG-RVAAVKLE--DG-----STIDADTIVIGIGAKPTVSPFERVG 325 (497)
Q Consensus 263 ~~~~~l~~~GV~i~~~~~v~~i~~~~~~-~v~~v~~~--~g-----~~i~~D~vv~a~G~~p~~~~~~~~g 325 (497)
++....+..++++++++.|++|..++++ ++.+|... +| .++.++.||+|.|.-....+|..++
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 3334334446999999999999865444 67788774 45 3688999999999754445555544
No 369
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.76 E-value=0.0062 Score=62.00 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=31.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 253 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 253 (497)
|+|+|||+|..|+-+|..|++.|.+|+|+++.+++..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 6899999999999999999999999999999876643
No 370
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.73 E-value=0.012 Score=56.16 Aligned_cols=80 Identities=23% Similarity=0.221 Sum_probs=58.8
Q ss_pred cCCeEEEEcCCHHHHH-HHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEE
Q 010917 215 KAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 293 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e-~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~ 293 (497)
..++|.|||.|-+|+. +|..|.++|.+|++.+..+.. + ..+.|++.|++++.+.....+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~------~-----~~~~L~~~gi~v~~g~~~~~l--------- 62 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP------P-----MSTQLEALGIDVYEGFDAAQL--------- 62 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT------T-----HHHHHHHTTCEEEESCCGGGG---------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc------H-----HHHHHHhCCCEEECCCCHHHc---------
Confidence 3578999999999996 899999999999999876531 1 234578889998866321110
Q ss_pred EEEeCCCcEEEcCEEEEeccCcCCCcch
Q 010917 294 AVKLEDGSTIDADTIVIGIGAKPTVSPF 321 (497)
Q Consensus 294 ~v~~~~g~~i~~D~vv~a~G~~p~~~~~ 321 (497)
.. ..+|.||++.|..|+.+.+
T Consensus 63 ----~~---~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 63 ----DE---FKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp ----GS---CCCSEEEECTTCCTTCHHH
T ss_pred ----CC---CCCCEEEECCCcCCCCHHH
Confidence 00 1479999999998887654
No 371
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.68 E-value=0.016 Score=58.21 Aligned_cols=33 Identities=27% Similarity=0.513 Sum_probs=30.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
-+|+|+|+|--|...|..|.+.|+ +|++||+++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~---~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENN---DITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTE---EEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 379999999999999999999988 899999986
No 372
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.67 E-value=0.0082 Score=62.40 Aligned_cols=61 Identities=13% Similarity=0.254 Sum_probs=42.9
Q ss_pred HHHHHCCcEEEcCCeEEEEEeCCC---CcEEEEEeC--CCc--EEEc-CEEEEeccCcCCCcchhhcCC
Q 010917 266 QLYQQNGVKFVKGASIKNLEAGSD---GRVAAVKLE--DGS--TIDA-DTIVIGIGAKPTVSPFERVGL 326 (497)
Q Consensus 266 ~~l~~~GV~i~~~~~v~~i~~~~~---~~v~~v~~~--~g~--~i~~-D~vv~a~G~~p~~~~~~~~gl 326 (497)
...++.|+++++++.|++|..+++ +++.+|... +|+ ++.+ +.||+|+|.-....+|..+|+
T Consensus 239 ~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGI 307 (587)
T 1gpe_A 239 PNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307 (587)
T ss_dssp TTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTE
T ss_pred HhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCC
Confidence 334567999999999999875432 467777664 564 5778 899999998655455554443
No 373
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.66 E-value=0.016 Score=47.68 Aligned_cols=37 Identities=11% Similarity=0.271 Sum_probs=32.9
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
...+.+|+|+|.|.-|...|..|.+.|+ +|+++|+++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~---~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDI---PLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 4456799999999999999999999998 899999874
No 374
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.63 E-value=0.0069 Score=62.41 Aligned_cols=64 Identities=22% Similarity=0.356 Sum_probs=44.6
Q ss_pred HHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEEeCC---Cc--EEEcC-EEEEeccCcCCCcchhhcCC
Q 010917 263 RYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TIDAD-TIVIGIGAKPTVSPFERVGL 326 (497)
Q Consensus 263 ~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i~~D-~vv~a~G~~p~~~~~~~~gl 326 (497)
++....++.|+++++++.|++|..++++++.+|.+.+ |+ ++.++ .||+|+|.--...++..+|+
T Consensus 214 ~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGi 283 (546)
T 2jbv_A 214 YIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGI 283 (546)
T ss_dssp HTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCC
Confidence 3334344679999999999999865437777887643 53 68898 99999997433345554443
No 375
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.55 E-value=0.026 Score=56.64 Aligned_cols=40 Identities=15% Similarity=0.336 Sum_probs=35.5
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 99 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 99 (497)
++..+||+|||+|++|+++|..|++.|+ +|+++|+++...
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~---~v~~~e~~~~~G 56 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGK---KILVLDRNPYYG 56 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeccCCCC
Confidence 3456899999999999999999999998 899999998654
No 376
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.54 E-value=0.0051 Score=63.46 Aligned_cols=36 Identities=22% Similarity=0.429 Sum_probs=31.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHH-cCCCCCcEEEEcCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAYA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~-~g~~~~~V~lie~~~~~ 98 (497)
.+|++|||||.||+.+|.+|++ .+. +|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~---~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDV---SVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTC---CEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCC---cEEEEecCCcc
Confidence 4799999999999999999998 444 89999998653
No 377
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.49 E-value=0.012 Score=52.47 Aligned_cols=107 Identities=15% Similarity=0.223 Sum_probs=66.6
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 294 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~ 294 (497)
.+++|+|||+|.+|...+..|.+.|.+|+++.+. ..++ +.+..++.+++++.+.- .
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~----l~~l~~~~~i~~i~~~~----~--------- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAE----INEWEAKGQLRVKRKKV----G--------- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHH----HHHHHHTTSCEEECSCC----C---------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHH----HHHHHHcCCcEEEECCC----C---------
Confidence 5799999999999999999999999999999764 2333 33334455677654321 1
Q ss_pred EEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEecC-----CCCCCCCcEEEecccc
Q 010917 295 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDG-----QFRTRMPGIFAIGDVA 353 (497)
Q Consensus 295 v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd~-----~~~t~~~~iya~GD~~ 353 (497)
.+..-.+|.||.|||.......+... .. .++.||. .+.-..|.++--||..
T Consensus 86 ----~~dL~~adLVIaAT~d~~~N~~I~~~---ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 86 ----EEDLLNVFFIVVATNDQAVNKFVKQH---IK-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp ----GGGSSSCSEEEECCCCTHHHHHHHHH---SC-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred ----HhHhCCCCEEEECCCCHHHHHHHHHH---Hh-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 01112389999999875433333222 11 2444442 1222457777777765
No 378
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.21 E-value=0.021 Score=47.91 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=32.1
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.....+|+|+|+|.-|...|..|.+.|+ +|+++++++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~---~V~vid~~~ 52 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGH---SVVVVDKNE 52 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 3445799999999999999999999987 899999864
No 379
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.12 E-value=0.028 Score=47.02 Aligned_cols=34 Identities=15% Similarity=0.255 Sum_probs=30.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+.+|+|+|+|..|...|..|.+.|+ +|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~---~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ---NVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC---CEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---CEEEEECCC
Confidence 4689999999999999999999988 899999863
No 380
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.70 E-value=0.024 Score=57.54 Aligned_cols=74 Identities=18% Similarity=0.249 Sum_probs=52.8
Q ss_pred CCCCcEEEEcCchHHHH-HHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCH
Q 010917 58 NENREFVIVGGGNAAGY-AARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 136 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~-aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (497)
...++|.|||-|-+|++ +|+.|.++|+ +|++.|.... ...
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~---~V~~~D~~~~------------------------------------~~~ 60 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGY---QISGSDLAPN------------------------------------SVT 60 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTC---EEEEECSSCC------------------------------------HHH
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCC---eEEEEECCCC------------------------------------HHH
Confidence 34589999999999997 6999999998 8999886521 012
Q ss_pred hHHHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCC
Q 010917 137 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 184 (497)
Q Consensus 137 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~ 184 (497)
+.+++.|+++..+.. ++. + ..+|.||+.+|..+.
T Consensus 61 ~~l~~~gi~~~~g~~-----~~~--~-------~~~d~vV~Spgi~~~ 94 (494)
T 4hv4_A 61 QHLTALGAQIYFHHR-----PEN--V-------LDASVVVVSTAISAD 94 (494)
T ss_dssp HHHHHTTCEEESSCC-----GGG--G-------TTCSEEEECTTSCTT
T ss_pred HHHHHCCCEEECCCC-----HHH--c-------CCCCEEEECCCCCCC
Confidence 457788999887632 111 0 147999999997654
No 381
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.68 E-value=0.038 Score=45.36 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=31.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+++|+|+|+|.-|...|..|.+.|+ +|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~---~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK---KVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECCH
Confidence 4689999999999999999999998 899999764
No 382
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.66 E-value=0.097 Score=54.06 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=33.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 252 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 252 (497)
++++|+|.|..|..+|..|.+.|.+|++++..+...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~ 384 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV 384 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHH
Confidence 899999999999999999999999999999887544
No 383
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.64 E-value=0.035 Score=56.31 Aligned_cols=39 Identities=26% Similarity=0.339 Sum_probs=35.0
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 253 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 253 (497)
..++|+|||+|.+|+.+|..|++.|.+|+|+++.+++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357899999999999999999999999999998876654
No 384
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.64 E-value=0.03 Score=44.12 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=30.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcC-CCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g-~~~~~V~lie~~~ 96 (497)
+++|+|+|+|..|...+..|.+.| + +|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~---~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNY---SVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSE---EEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCc---eEEEEeCCH
Confidence 468999999999999999999998 5 799998753
No 385
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.58 E-value=0.032 Score=55.27 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=32.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
++|+|||+|..|+-+|..|++.|.+|+|+++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 47999999999999999999999999999988654
No 386
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.54 E-value=0.13 Score=48.77 Aligned_cols=85 Identities=13% Similarity=0.176 Sum_probs=55.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcC--CeEEEEEeCCCCcEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKG--ASIKNLEAGSDGRVAA 294 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~--~~v~~i~~~~~~~v~~ 294 (497)
.+|+|||+|.+|.-+|..|++.|.+|+++.|.+ . +.+++.|+.+... ... .+.+ + .
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~-------------~~i~~~Gl~~~~~~~g~~-~~~~-----~-~ 60 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--Y-------------ETVKAKGIRIRSATLGDY-TFRP-----A-A 60 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--H-------------HHHHHHCEEEEETTTCCE-EECC-----S-C
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--H-------------HHHHhCCcEEeecCCCcE-EEee-----e-e
Confidence 579999999999999999999999999998753 0 2356667766531 111 1100 0 1
Q ss_pred EEeCCC-cEE-EcCEEEEeccCcCCCcchhhc
Q 010917 295 VKLEDG-STI-DADTIVIGIGAKPTVSPFERV 324 (497)
Q Consensus 295 v~~~~g-~~i-~~D~vv~a~G~~p~~~~~~~~ 324 (497)
+. .+- +.. ++|.||+|+-.....+.++.+
T Consensus 61 ~~-~~~~~~~~~~DlVilavK~~~~~~~l~~l 91 (320)
T 3i83_A 61 VV-RSAAELETKPDCTLLCIKVVEGADRVGLL 91 (320)
T ss_dssp EE-SCGGGCSSCCSEEEECCCCCTTCCHHHHH
T ss_pred eE-CCHHHcCCCCCEEEEecCCCChHHHHHHH
Confidence 11 222 222 689999998877665555554
No 387
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.44 E-value=0.037 Score=49.35 Aligned_cols=37 Identities=24% Similarity=0.508 Sum_probs=32.7
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
....++|+|||||..|...|..|.+.|. +|+|++++.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA---~VtVvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA---AITVVAPTV 64 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC---CEEEECSSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 3457899999999999999999999987 899999763
No 388
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.34 E-value=0.037 Score=54.73 Aligned_cols=35 Identities=23% Similarity=0.150 Sum_probs=32.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
++|+|||+|..|+-+|..|++.|.+|+|+++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 36999999999999999999999999999998665
No 389
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.24 E-value=0.035 Score=55.20 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=31.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 249 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 249 (497)
.++|+|||+|+.|+.+|..|++.|.+|+|+++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999875
No 390
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.19 E-value=0.05 Score=44.30 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=29.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+|+|||+|.-|...|..|.+.|+ +|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~---~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH---DIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 489999999999999999999987 899998753
No 391
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=94.19 E-value=0.021 Score=54.45 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=45.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHh--CCCcEEEEecCCcchhhcc------C-HHHHHHHHHHHHHCCcEEEcCCeE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLF------T-PSLAQRYEQLYQQNGVKFVKGASI 281 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~~~~~------~-~~~~~~~~~~l~~~GV~i~~~~~v 281 (497)
...|+|||+|+.|+-+|..|++ .|.+|+++++.+.+..... + ..+...+.+.+++.|+++..+...
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~ 139 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDY 139 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCcc
Confidence 4579999999999999999964 6999999998765432110 0 011123345567788888766543
No 392
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.15 E-value=0.037 Score=55.23 Aligned_cols=130 Identities=15% Similarity=0.165 Sum_probs=76.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhHH
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 139 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
.++|+|||.|.+|+++|+.|+++|+ +|+++|.....+. ...+
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~---~v~~~D~~~~~~~-----------------------------------~~~l 46 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGV---TPRVMDTRMTPPG-----------------------------------LDKL 46 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTC---CCEEEESSSSCTT-----------------------------------GGGS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCC---EEEEEECCCCcch-----------------------------------hHHh
Confidence 4689999999999999999999998 8999998654210 0112
Q ss_pred HHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCeE
Q 010917 140 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 219 (497)
Q Consensus 140 ~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~v 219 (497)
+ .|+++..+... .+. + -.+|.+|+++|..+. .|.+......++..+.. .+.+... ...+.|
T Consensus 47 ~-~G~~~~~g~~~----~~~--~-------~~~d~vV~s~gi~~~-~p~~~~a~~~~~~v~~~---~~~~~~~-~~~~vI 107 (439)
T 2x5o_A 47 P-EAVERHTGSLN----DEW--L-------MAADLIVASPGIALA-HPSLSAAADAGIEIVGD---IELFCRE-AQAPIV 107 (439)
T ss_dssp C-TTSCEEESSCC----HHH--H-------HTCSEEEECTTSCTT-CHHHHHHHHTTCEEECH---HHHHHHH-CCSCEE
T ss_pred h-CCCEEEECCCc----HHH--h-------ccCCEEEeCCCCCCC-CHHHHHHHHCCCcEEEH---HHHHHHh-cCCCEE
Confidence 3 57777665421 000 0 036889999997654 23322111134444432 2223232 234556
Q ss_pred EEEcC---CHHHHHHHHHHHhCCCcEEEEe
Q 010917 220 VVVGG---GYIGMEVAAAAVGWKLDTTIIF 246 (497)
Q Consensus 220 vVvG~---G~~g~e~A~~l~~~g~~Vtlv~ 246 (497)
.|-|+ +-+..-++..|...|.++.+..
T Consensus 108 ~VTGTnGKTTT~~ml~~iL~~~g~~~~~~g 137 (439)
T 2x5o_A 108 AITGSNGKSTVTTLVGEMAKAAGVNVGVGG 137 (439)
T ss_dssp EEECSSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEECCCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 66664 2344556666777888776543
No 393
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.14 E-value=0.046 Score=52.72 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=31.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 249 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 249 (497)
.+|+|||+|..|+-+|..|++.|.+|+|+++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999885
No 394
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=94.00 E-value=0.048 Score=54.08 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
+|+|||+|..|+-+|..|++.|.+|+|+++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6999999999999999999999999999987654
No 395
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.96 E-value=0.054 Score=52.51 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=30.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 249 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 249 (497)
++|+|||+|..|+++|..+++.|.+|+++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999754
No 396
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.94 E-value=0.056 Score=53.50 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=34.0
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCC-CcEEEEecCCcch
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHLL 252 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~~ 252 (497)
...+|+|||+|..|+-+|..|++.| .+|+|+++.+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 3568999999999999999999999 8999999887653
No 397
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.92 E-value=0.096 Score=42.91 Aligned_cols=77 Identities=14% Similarity=0.189 Sum_probs=50.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEE
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 295 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v 295 (497)
.++++|+|.|..|..+|..|.+.|.+|+++++.+. .. +.+++.|+.++.+.- . +. .
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~---------~~----~~~~~~g~~~i~gd~------~-~~---~- 62 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT---------RV----DELRERGVRAVLGNA------A-NE---E- 62 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH---------HH----HHHHHTTCEEEESCT------T-SH---H-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH---------HH----HHHHHcCCCEEECCC------C-CH---H-
Confidence 46899999999999999999999999999987532 11 224556777654320 0 00 0
Q ss_pred EeCCCcEEEcCEEEEeccCcC
Q 010917 296 KLEDGSTIDADTIVIGIGAKP 316 (497)
Q Consensus 296 ~~~~g~~i~~D~vv~a~G~~p 316 (497)
.+..-..-.+|.||++++...
T Consensus 63 ~l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 63 IMQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp HHHHTTGGGCSEEEECCSCHH
T ss_pred HHHhcCcccCCEEEEECCChH
Confidence 000001135899999987643
No 398
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.91 E-value=0.06 Score=52.30 Aligned_cols=37 Identities=24% Similarity=0.402 Sum_probs=33.5
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC-Ccc
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHL 251 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~-~~~ 251 (497)
...+|+|||+|..|+-+|..|.+.|.+|+|+++. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3578999999999999999999999999999988 554
No 399
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.86 E-value=0.054 Score=54.87 Aligned_cols=77 Identities=16% Similarity=0.152 Sum_probs=57.0
Q ss_pred ccCCeEEEEcCCHHHHH-HHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcE
Q 010917 214 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 292 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e-~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v 292 (497)
...++|.|||-|-+|+- +|..|.++|.+|+..+.... + ..+.|++.|++++.+.....
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-------~-----~~~~l~~~gi~~~~g~~~~~--------- 78 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-------S-----VTQHLTALGAQIYFHHRPEN--------- 78 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-------H-----HHHHHHHTTCEEESSCCGGG---------
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC-------H-----HHHHHHHCCCEEECCCCHHH---------
Confidence 34689999999999996 89999999999999876532 1 22457888999987632110
Q ss_pred EEEEeCCCcEEEcCEEEEeccCcCCCcc
Q 010917 293 AAVKLEDGSTIDADTIVIGIGAKPTVSP 320 (497)
Q Consensus 293 ~~v~~~~g~~i~~D~vv~a~G~~p~~~~ 320 (497)
+ ..+|.||++.|..++.+.
T Consensus 79 ----~-----~~~d~vV~Spgi~~~~p~ 97 (494)
T 4hv4_A 79 ----V-----LDASVVVVSTAISADNPE 97 (494)
T ss_dssp ----G-----TTCSEEEECTTSCTTCHH
T ss_pred ----c-----CCCCEEEECCCCCCCCHH
Confidence 1 137999999999887654
No 400
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.85 E-value=0.051 Score=54.73 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=32.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC--cEEEEecCCcc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHL 251 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~--~Vtlv~~~~~~ 251 (497)
++|+|||+|.+|+-+|..|++.|. +|+|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999987654
No 401
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.83 E-value=0.091 Score=43.89 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=33.4
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 250 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 250 (497)
..+++|+|+|+|.+|..+|..|.+.|.+|+++.+.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4678999999999999999999999999999988654
No 402
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.72 E-value=0.058 Score=53.26 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=31.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 249 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 249 (497)
.+|+|||||..|+-+|..|++.|.+|+|+++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 403
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.71 E-value=0.083 Score=45.49 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=31.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEA 96 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~-g~~~~~V~lie~~~ 96 (497)
....+|+|||.|.-|...|..|.+. |+ +|+++|+++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~---~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK---ISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS---CEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC---eEEEEECCH
Confidence 3356899999999999999999998 98 799999864
No 404
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.70 E-value=0.057 Score=55.08 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCC-CcEEEEecCCcc
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 251 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 251 (497)
..+|+|||+|..|+-+|..|.+.| .+|+|++.++++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 358999999999999999999999 999999987643
No 405
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.69 E-value=0.06 Score=53.92 Aligned_cols=39 Identities=15% Similarity=0.048 Sum_probs=35.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhh
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR 254 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 254 (497)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.+..+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 457999999999999999999999999999999876554
No 406
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=93.67 E-value=0.059 Score=54.24 Aligned_cols=38 Identities=29% Similarity=0.407 Sum_probs=32.7
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
....+|+|||+|..|+-+|..|++.|.+|+|+++.+++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 34678999999999999999999999999999988654
No 407
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.64 E-value=0.066 Score=54.14 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=35.1
Q ss_pred ccCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh
Q 010917 214 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 253 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 253 (497)
....+|+|||+|..|+-+|..|++.|.+|+|+++.+++..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 3467899999999999999999999999999998876543
No 408
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.61 E-value=0.067 Score=43.70 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=30.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+++|+|+|+|.-|...|..|.+.|+ +|+++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~---~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH---EVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4689999999999999999999987 799998753
No 409
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.61 E-value=0.063 Score=52.29 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=31.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 250 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 250 (497)
.+|+|||+|..|+-+|..|++.|.+|+|+++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3699999999999999999999999999998753
No 410
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=93.48 E-value=0.063 Score=52.05 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=32.0
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
..++|+|||+|.+|+-+|..|+ .|.+|+|+++.+.+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 3578999999999999999999 69999999988644
No 411
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.42 E-value=0.074 Score=51.37 Aligned_cols=33 Identities=30% Similarity=0.435 Sum_probs=30.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 248 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 248 (497)
..+|+|||+|.+|+-+|..|++.|.+|+|+++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 457999999999999999999999999999975
No 412
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=93.42 E-value=0.067 Score=54.59 Aligned_cols=61 Identities=28% Similarity=0.366 Sum_probs=46.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhc-----------------cCHHHHHHHHHHHHHCCcEEEc
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-----------------FTPSLAQRYEQLYQQNGVKFVK 277 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~GV~i~~ 277 (497)
..+|+|||+|..|+-+|..|++.|.+|+|+++.+++..+. +... ...+.+.+++.|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~ 81 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETYK 81 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCccee
Confidence 3579999999999999999999999999999987663321 1111 24556778888887643
No 413
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.36 E-value=0.041 Score=50.73 Aligned_cols=37 Identities=19% Similarity=0.411 Sum_probs=32.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
...++|+|||||..|...+..|.+.|. +|+||+++..
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga---~VtViap~~~ 47 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGC---KLTLVSPDLH 47 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTC---EEEEEEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCCC
Confidence 346899999999999999999999997 8999998653
No 414
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.24 E-value=0.14 Score=41.81 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=30.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 248 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 248 (497)
.++++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999999864
No 415
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.24 E-value=0.03 Score=55.92 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=56.0
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 294 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~ 294 (497)
.+++|+|||.|.+|+..|..|.++|.+|+..+........ ..++ .|+++..+... . . .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~-----------~~l~-~G~~~~~g~~~---~-~------~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL-----------DKLP-EAVERHTGSLN---D-E------W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTG-----------GGSC-TTSCEEESSCC---H-H------H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchh-----------HHhh-CCCEEEECCCc---H-H------H
Confidence 4689999999999999999999999999999876542210 2345 68888755421 0 0 0
Q ss_pred EEeCCCcEEEcCEEEEeccCcCCCcch
Q 010917 295 VKLEDGSTIDADTIVIGIGAKPTVSPF 321 (497)
Q Consensus 295 v~~~~g~~i~~D~vv~a~G~~p~~~~~ 321 (497)
+ . .+|.||++.|..|+.+.+
T Consensus 62 ~------~-~~d~vV~s~gi~~~~p~~ 81 (439)
T 2x5o_A 62 L------M-AADLIVASPGIALAHPSL 81 (439)
T ss_dssp H------H-TCSEEEECTTSCTTCHHH
T ss_pred h------c-cCCEEEeCCCCCCCCHHH
Confidence 0 1 378999999988765543
No 416
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.06 E-value=0.16 Score=51.85 Aligned_cols=131 Identities=12% Similarity=0.045 Sum_probs=76.3
Q ss_pred CCcEEEEcCchHHHHH-HHHHHHcCCCCCcEEEEcCCCCCCCCCCCCCccccCCCCCCCCCCCCCccccCCCCCCCCHhH
Q 010917 60 NREFVIVGGGNAAGYA-ARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 138 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~a-A~~L~~~g~~~~~V~lie~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (497)
.++|.+||-|-+||++ |+.|.++|+ +|++.|..... ...+.
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~---~V~~sD~~~~~-----------------------------------~~~~~ 60 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGH---TVTGSDANIYP-----------------------------------PMSTQ 60 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCCT-----------------------------------THHHH
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCC---EEEEECCCCCc-----------------------------------HHHHH
Confidence 4789999999999985 888899998 89999876421 01345
Q ss_pred HHHcCcEEEeCCcEEEEecCCCEEEECCCcEEEeccEEeccCCCCCcCCCCCCCCCCcEEEecCHHHHHHHHHhhccCCe
Q 010917 139 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKK 218 (497)
Q Consensus 139 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~i~~d~lvlAtG~~~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~ 218 (497)
+++.|+++..+.. ++.. .-.+|.||+.+|..+. .|.+......|+..+. +.+-+.+.+...++
T Consensus 61 L~~~gi~~~~G~~-----~~~~--------~~~~d~vV~Spgi~~~-~p~l~~a~~~gi~v~~---~~e~l~~~~~~~~~ 123 (524)
T 3hn7_A 61 LEQAGVTIEEGYL-----IAHL--------QPAPDLVVVGNAMKRG-MDVIEYMLDTGLRYTS---GPQFLSEQVLQSRH 123 (524)
T ss_dssp HHHTTCEEEESCC-----GGGG--------CSCCSEEEECTTCCTT-SHHHHHHHHHTCCEEE---HHHHHHHHTGGGSE
T ss_pred HHHCCCEEECCCC-----HHHc--------CCCCCEEEECCCcCCC-CHHHHHHHHCCCcEEE---HHHHHHHHHhccCc
Confidence 6778999887632 1110 0147899999997654 2321110012332322 23333332223344
Q ss_pred -EEEEcC-CH--HHHHHHHHHHhCCCcEEEE
Q 010917 219 -VVVVGG-GY--IGMEVAAAAVGWKLDTTII 245 (497)
Q Consensus 219 -vvVvG~-G~--~g~e~A~~l~~~g~~Vtlv 245 (497)
|.|=|+ |- +..-++..|...|.+++++
T Consensus 124 vIaVTGTnGKTTTt~li~~iL~~~G~~~~~~ 154 (524)
T 3hn7_A 124 VIAVAGTHGKTTTTTMLAWILHYAGIDAGFL 154 (524)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHcCCCceEE
Confidence 445553 32 3344566677788887644
No 417
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.00 E-value=0.11 Score=52.97 Aligned_cols=80 Identities=20% Similarity=0.136 Sum_probs=57.6
Q ss_pred ccCCeEEEEcCCHHHHH-HHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcE
Q 010917 214 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRV 292 (497)
Q Consensus 214 ~~~~~vvVvG~G~~g~e-~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v 292 (497)
...++|.+||-|-+|+- +|..|.++|.+|+..+.... ++ ..+.|++.||+++.+.....+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~G~~~~~~-------- 77 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEEGYLIAHL-------- 77 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEESCCGGGG--------
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEECCCCHHHc--------
Confidence 46789999999999997 68889999999999987642 11 235578889998766321111
Q ss_pred EEEEeCCCcEEEcCEEEEeccCcCCCcch
Q 010917 293 AAVKLEDGSTIDADTIVIGIGAKPTVSPF 321 (497)
Q Consensus 293 ~~v~~~~g~~i~~D~vv~a~G~~p~~~~~ 321 (497)
.-.+|.||++.|..++.+.+
T Consensus 78 ---------~~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 78 ---------QPAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp ---------CSCCSEEEECTTCCTTSHHH
T ss_pred ---------CCCCCEEEECCCcCCCCHHH
Confidence 01479999999998876553
No 418
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=93.00 E-value=0.1 Score=50.92 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=32.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 252 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 252 (497)
.+|+|||+|.+|+.+|..|++.|.+|+++++.+.+.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 479999999999999999999999999999887654
No 419
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.99 E-value=0.1 Score=54.12 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCC-CcEEEEEeCCCcEEEcCEEEEeccCcCC
Q 010917 257 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPT 317 (497)
Q Consensus 257 ~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~-~~v~~v~~~~g~~i~~D~vv~a~G~~p~ 317 (497)
...+.+.+.+.++..|.++++++.|.+|...++ +++.+|.+.+|+++.||.||......|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 446788888899999999999999999976543 7888888888999999999998776664
No 420
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.84 E-value=0.11 Score=50.20 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=32.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
+|+|+|||||..|..+|+.+++.|+ +++++|.++..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~---~vv~vd~~~~~ 36 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGM---KVVLVDKNPQA 36 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCCC
Confidence 5799999999999999999999999 89999987654
No 421
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.68 E-value=0.11 Score=51.96 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=32.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 252 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 252 (497)
.+|+|||+|..|+-+|..|++.|.+|+|+++.+++.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 579999999999999999999999999999876543
No 422
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=92.66 E-value=0.11 Score=52.67 Aligned_cols=38 Identities=29% Similarity=0.330 Sum_probs=34.0
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 252 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 252 (497)
...+|+|||+|..|+-+|..|++.|.+|+|+++.+++.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 35789999999999999999999999999999987654
No 423
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.64 E-value=0.11 Score=51.71 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=32.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCc
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH 250 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~ 250 (497)
..+|+|||+|..|+-+|..|++.|. +|+|+++.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 3579999999999999999999999 9999998764
No 424
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=92.61 E-value=0.12 Score=50.48 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=33.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 252 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 252 (497)
..+|+|||+|..|+-+|..|++.|.+|+|+++.+.+.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 3579999999999999999999999999999886654
No 425
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.57 E-value=0.15 Score=48.10 Aligned_cols=85 Identities=16% Similarity=0.158 Sum_probs=52.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 296 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~ 296 (497)
.+|+|||+|..|.-+|..|++.|.+|+++.|.+ . +.+++.|+.+.....-..+.+ + .+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~-------------~~i~~~g~~~~~~~g~~~~~~-----~-~~~ 61 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--Y-------------EAIAGNGLKVFSINGDFTLPH-----V-KGY 61 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--H-------------HHHHHTCEEEEETTCCEEESC-----C-CEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--H-------------HHHHhCCCEEEcCCCeEEEee-----c-eee
Confidence 479999999999999999999999999998753 1 235677877653210001100 0 011
Q ss_pred eCCCc-EEEcCEEEEeccCcCCCcchhh
Q 010917 297 LEDGS-TIDADTIVIGIGAKPTVSPFER 323 (497)
Q Consensus 297 ~~~g~-~i~~D~vv~a~G~~p~~~~~~~ 323 (497)
.+-+ .-++|.||+|+-.....+.++.
T Consensus 62 -~~~~~~~~~D~vilavk~~~~~~~l~~ 88 (312)
T 3hn2_A 62 -RAPEEIGPMDLVLVGLKTFANSRYEEL 88 (312)
T ss_dssp -SCHHHHCCCSEEEECCCGGGGGGHHHH
T ss_pred -cCHHHcCCCCEEEEecCCCCcHHHHHH
Confidence 1211 1268999999876554444444
No 426
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.55 E-value=0.089 Score=51.53 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=30.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-CC-CcEEEEecCC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVG-WK-LDTTIIFPEN 249 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~-~g-~~Vtlv~~~~ 249 (497)
.+|+|||+|..|+.+|..|++ .| .+|+|+++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999875
No 427
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.45 E-value=0.17 Score=47.99 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=29.0
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 248 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 248 (497)
...+|.|||+|..|.-+|..|++.|.+|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4678999999999999999999999999998 54
No 428
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.43 E-value=0.13 Score=50.03 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=31.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
...+|+|||+|.+|+.+|..|+..|. +|+++|..+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA---VVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 35799999999999999999999987 899999875
No 429
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.39 E-value=0.13 Score=54.34 Aligned_cols=34 Identities=15% Similarity=0.331 Sum_probs=31.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 250 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 250 (497)
.+|+|||+|..|+-+|..|++.|.+|+|+++.+.
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5899999999999999999999999999998643
No 430
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.36 E-value=0.18 Score=41.86 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=30.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 248 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 248 (497)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999875
No 431
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.35 E-value=0.087 Score=50.60 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=29.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCC------CcEEEEecCC
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWK------LDTTIIFPEN 249 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g------~~Vtlv~~~~ 249 (497)
+|+|||+|.+|+-+|..|++.| .+|+|+++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999874
No 432
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.29 E-value=0.13 Score=54.57 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=31.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
.+|+|||+|..|+-+|..|++.|.+|+|+++.+.+
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 57999999999999999999999999999986433
No 433
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=92.25 E-value=0.11 Score=51.07 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=33.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhC-CCcEEEEecCCcch
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLL 252 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~ 252 (497)
..+|+|||+|..|+-+|..|++. |.+|+|+++.+++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45799999999999999999998 99999999886553
No 434
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=92.22 E-value=0.14 Score=49.75 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=31.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch
Q 010917 218 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 252 (497)
Q Consensus 218 ~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 252 (497)
+++|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 68999999999999999999999999999876543
No 435
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.97 E-value=0.15 Score=52.31 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=31.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHh---CCCcEEEEecCC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPEN 249 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~---~g~~Vtlv~~~~ 249 (497)
..+|+|||||..|+-+|..|++ .|.+|+|+++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 5689999999999999999999 999999999864
No 436
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.93 E-value=0.18 Score=47.39 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=31.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
...++|.|||+|.-|...|..|++.|+ +|+++|+++
T Consensus 13 ~~~~~I~VIG~G~mG~~iA~~la~~G~---~V~~~d~~~ 48 (302)
T 1f0y_A 13 IIVKHVTVIGGGLMGAGIAQVAAATGH---TVVLVDQTE 48 (302)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 345789999999999999999999998 899999864
No 437
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.92 E-value=0.14 Score=49.40 Aligned_cols=35 Identities=17% Similarity=0.070 Sum_probs=31.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
...+|+|||+|..|+.+|..|+..|. +|+++|+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA---KTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 45799999999999999999999997 899999874
No 438
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.90 E-value=0.34 Score=48.92 Aligned_cols=36 Identities=17% Similarity=0.369 Sum_probs=33.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
.+||+|||||++||+||..|++.|+ +|+|+|+++..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~ 74 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGF---KTLLLEARDRI 74 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTC---CEEEECSSSBS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 3799999999999999999999998 89999998754
No 439
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.86 E-value=0.16 Score=48.95 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=32.9
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
....+|||+|+|.+|..+|..|...|.+ +|+++|+..
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCC
Confidence 4568999999999999999999999863 899999983
No 440
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.80 E-value=0.16 Score=46.29 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
.++|+|||+|-.|..+|..|++.|.. +|+|+|.+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~--~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVG--NLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCC--eEEEEcCCCc
Confidence 47999999999999999999999963 8999998754
No 441
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.80 E-value=0.16 Score=48.97 Aligned_cols=37 Identities=24% Similarity=0.418 Sum_probs=32.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
....+|||+|||.||+.+|..|...|.+ +|+++|+..
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCC
Confidence 4457999999999999999999999863 899999974
No 442
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=91.63 E-value=0.17 Score=53.27 Aligned_cols=37 Identities=24% Similarity=0.520 Sum_probs=33.4
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
..++|+|||+|..|+.+|..|.+.|.+|+++++.+++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4679999999999999999999999999999987543
No 443
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.51 E-value=0.39 Score=45.17 Aligned_cols=76 Identities=20% Similarity=0.319 Sum_probs=48.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 296 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~ 296 (497)
.+|+|||+|.+|.-+|..|+ .|.+|+++.|.+. - .+.+++.|+.+..... .... .+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~---------~----~~~l~~~G~~~~~~~~-~~~~--------~~~ 59 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQE---------Q----AAAIQSEGIRLYKGGE-EFRA--------DCS 59 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH---------H----HHHHHHHCEEEEETTE-EEEE--------CCE
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHH---------H----HHHHHhCCceEecCCC-eecc--------ccc
Confidence 57999999999999999999 9999999977531 1 1334566887753221 1111 111
Q ss_pred eCCCcEEEcCEEEEeccCc
Q 010917 297 LEDGSTIDADTIVIGIGAK 315 (497)
Q Consensus 297 ~~~g~~i~~D~vv~a~G~~ 315 (497)
......-++|.||+|+-..
T Consensus 60 ~~~~~~~~~D~vilavK~~ 78 (307)
T 3ego_A 60 ADTSINSDFDLLVVTVKQH 78 (307)
T ss_dssp EESSCCSCCSEEEECCCGG
T ss_pred ccccccCCCCEEEEEeCHH
Confidence 1111123589999997543
No 444
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.51 E-value=0.18 Score=44.82 Aligned_cols=32 Identities=28% Similarity=0.580 Sum_probs=29.6
Q ss_pred cEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 62 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 62 ~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+|+|+|+|.-|...|..|.+.|+ +|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~---~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY---GVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 69999999999999999999988 899999764
No 445
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=91.51 E-value=0.18 Score=54.44 Aligned_cols=36 Identities=22% Similarity=0.505 Sum_probs=32.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
.++|+|||+|..|+.+|..|.+.|.+|+|+++.+++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 568999999999999999999999999999987543
No 446
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=91.45 E-value=0.14 Score=51.47 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENH 250 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~ 250 (497)
.+|+|||+|.+|+-+|..|++.| .+|+++++.+.
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 57999999999999999999999 99999998644
No 447
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.40 E-value=0.22 Score=46.32 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=31.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.++|.|||+|.-|...|..|++.|+ +|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~---~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGF---AVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCH
Confidence 4799999999999999999999998 899998864
No 448
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=91.39 E-value=0.61 Score=48.41 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=35.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 99 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 99 (497)
++.+||+|||+|..|...|..|++.|. +|.+||++++..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~---~vl~id~~~~~g 44 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQ---RVLHVDSRSYYG 44 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCCccc
Confidence 346999999999999999999999997 899999998754
No 449
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.37 E-value=0.25 Score=39.94 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=29.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 248 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 248 (497)
+.+++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 358999999999999999999999999999764
No 450
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=91.23 E-value=0.19 Score=51.73 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 249 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 249 (497)
.-.|+|||||..|+-+|..|++.|.+|+|+++.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3579999999999999999999999999999874
No 451
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.23 E-value=0.16 Score=46.69 Aligned_cols=34 Identities=24% Similarity=0.492 Sum_probs=31.8
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 248 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 248 (497)
.+++|+|||+|.+|...+..|.+.|++|+++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5789999999999999999999999999999864
No 452
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.05 E-value=0.15 Score=47.92 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=29.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 248 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 248 (497)
.+|.|||+|..|.-+|..|.+.|.+|+++.+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999998764
No 453
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.91 E-value=0.21 Score=47.73 Aligned_cols=77 Identities=16% Similarity=0.241 Sum_probs=49.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK 296 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~v~ 296 (497)
.+|.|||+|..|.-+|..|++.|.+|+++.|.+ . .+.+++.|+.+..... . .... + ..
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~----~----------~~~~~~~g~~~~~~~~-~-~~~~----~-~~- 61 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGA----T----------LQALQTAGLRLTEDGA-T-HTLP----V-RA- 61 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH----H----------HHHHHHTCEEEEETTE-E-EEEC----C-EE-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH----H----------HHHHHHCCCEEecCCC-e-EEEe----e-eE-
Confidence 579999999999999999999999999987531 1 1335677887653211 1 1100 0 11
Q ss_pred eCCC-cEEEcCEEEEeccCc
Q 010917 297 LEDG-STIDADTIVIGIGAK 315 (497)
Q Consensus 297 ~~~g-~~i~~D~vv~a~G~~ 315 (497)
..+- ..-++|.||+|+...
T Consensus 62 ~~~~~~~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 62 THDAAALGEQDVVIVAVKAP 81 (335)
T ss_dssp ESCHHHHCCCSEEEECCCHH
T ss_pred ECCHHHcCCCCEEEEeCCch
Confidence 1121 123589999998653
No 454
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.88 E-value=0.23 Score=38.71 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=29.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCC-CcEEEEecC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPE 248 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~ 248 (497)
.++++|+|+|.+|..++..|.+.| .+|+++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 889888775
No 455
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=90.69 E-value=0.28 Score=49.44 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=33.6
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCC-CcEEEEecCCcch
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHLL 252 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~~ 252 (497)
...+|+|||+|..|+-+|..|++.| .+|+++++.+.+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 3568999999999999999999998 7999999887653
No 456
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.69 E-value=0.23 Score=49.28 Aligned_cols=39 Identities=13% Similarity=0.317 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 99 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~~ 99 (497)
+..+||+|||+|++|+++|..|++.|+ +|+++|+++...
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~g 42 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGK---KVLHMDRNPYYG 42 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCCcc
Confidence 345799999999999999999999998 899999987643
No 457
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.60 E-value=0.24 Score=48.54 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=30.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
..+|+|||+|.+|+.+|..++..|. +|+++|..+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGA---IVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 5799999999999999999999986 799998764
No 458
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.57 E-value=0.32 Score=45.88 Aligned_cols=39 Identities=21% Similarity=0.234 Sum_probs=33.3
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchh
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 253 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 253 (497)
..++|.|||+|..|..+|..++..|.+|++++..+..+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~ 43 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQIT 43 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 357899999999999999999999999999988765443
No 459
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.56 E-value=0.15 Score=50.88 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=29.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC-CcEEEEec
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFP 247 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~ 247 (497)
.+|+|||+|..|+-+|..|++.| .+|+|+++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 460
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.52 E-value=0.29 Score=39.73 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=30.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 248 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~ 248 (497)
.++++|+|+|.+|..++..|.+.|.+|+++.+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999998764
No 461
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.43 E-value=0.28 Score=46.48 Aligned_cols=36 Identities=19% Similarity=0.538 Sum_probs=32.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
..+|+|||+|-.|..+|..|++.|. ++++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV--g~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV--RKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CEEEEecCCEe
Confidence 5799999999999999999999997 49999998764
No 462
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.28 E-value=0.29 Score=47.70 Aligned_cols=35 Identities=20% Similarity=0.113 Sum_probs=31.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
...+|+|||+|.+|+.++..++..|. +|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA---VVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46799999999999999999999986 799998764
No 463
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.28 E-value=0.22 Score=49.78 Aligned_cols=35 Identities=37% Similarity=0.609 Sum_probs=31.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
..++|+|||||..|...+..|.+.|. +|+|++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga---~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGA---RLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB---EEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC---EEEEEcCCC
Confidence 45899999999999999999999987 899999864
No 464
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.26 E-value=0.32 Score=46.06 Aligned_cols=36 Identities=14% Similarity=0.370 Sum_probs=31.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 95 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 95 (497)
...+|.|||+|..|.+.|..|+..|+ ..+++++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 35689999999999999999999986 4589999875
No 465
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.19 E-value=0.31 Score=46.12 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=31.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+.||+|||+|..|.+.|..|+..++ ..+|+++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 4699999999999999999999886 55899999763
No 466
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.96 E-value=0.28 Score=44.63 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=32.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
..+|+|||+|-.|..+|..|++.|.. +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg--~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVG--TLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCS--EEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCC--eEEEEeCCCc
Confidence 57999999999999999999999973 8999998754
No 467
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.88 E-value=0.36 Score=45.54 Aligned_cols=37 Identities=11% Similarity=0.270 Sum_probs=32.0
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 010917 57 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 95 (497)
Q Consensus 57 ~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 95 (497)
++..++|.|||+|.-|.+.|..|++.|+ .+|+++|..
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 3445799999999999999999999886 389999976
No 468
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.59 E-value=0.29 Score=45.52 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=33.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
...+|+|||+|-.|-.+|..|++.|. ++++|+|.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV--G~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI--GKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC--CEEEEECCCcc
Confidence 35799999999999999999999996 49999998754
No 469
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.54 E-value=0.34 Score=45.86 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=30.0
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+|.|||+|.-|...|..|++.|+ +|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH---CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC---EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---eEEEEeCCh
Confidence 589999999999999999999987 899998753
No 470
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.54 E-value=0.36 Score=46.49 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=31.9
Q ss_pred cCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 56 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 56 ~~~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
|.+.+.+|.|||+|.-|.+.|..|++.|+ +|+++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~---~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQ---KVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTC---CEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 33445689999999999999999999998 899999864
No 471
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.51 E-value=0.35 Score=46.69 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=30.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.++|+|+|+|.+|..++..|+..|. +|+++++.+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga---~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA---QVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 4799999999999999999999986 899998763
No 472
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.31 E-value=0.45 Score=45.25 Aligned_cols=35 Identities=11% Similarity=0.228 Sum_probs=30.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+.+|+|||+|.-|.+.|..|++.|+- +|+|+|.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~--~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELA--DVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCh
Confidence 45899999999999999999998862 599999764
No 473
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.30 E-value=0.32 Score=45.88 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=30.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
..+|.|||+|.-|...|..++..|+ +|+|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~---~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 4689999999999999999999999 899999875
No 474
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.05 E-value=0.44 Score=43.70 Aligned_cols=34 Identities=18% Similarity=0.440 Sum_probs=30.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.++++|||+|-+|-++|..|++.|. +|+++.+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~---~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL---QVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 6899999999999999999999984 899998763
No 475
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.69 E-value=0.42 Score=40.93 Aligned_cols=34 Identities=18% Similarity=0.084 Sum_probs=30.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhC-CCcEEEEecCC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPEN 249 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 249 (497)
+++++|+|.|.+|..+|..|.+. |.+|+++++.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 56899999999999999999999 99999997653
No 476
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=88.67 E-value=0.37 Score=49.75 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=32.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 457999999999999999999999999999987644
No 477
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.62 E-value=0.37 Score=45.40 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=28.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 95 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 95 (497)
.+|.|||+|.-|.+.|..|++.|+ +|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE---DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC---CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---eEEEEEcC
Confidence 589999999999999999999987 79999875
No 478
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=88.58 E-value=0.42 Score=47.92 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=32.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCcchh
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQ 253 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~~~ 253 (497)
..+|+|||+|..|+-+|..|.+.|. +|+++++.+++..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 4579999999999999999999998 8999998866543
No 479
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.43 E-value=0.56 Score=44.71 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=31.0
Q ss_pred CCCcEEEEcC-chHHHHHHHHHHHcCCCCCcEEEEcCC
Q 010917 59 ENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKE 95 (497)
Q Consensus 59 ~~~~VvIIGg-G~AGl~aA~~L~~~g~~~~~V~lie~~ 95 (497)
.+.||+|||+ |..|.++|..+..+|. ..+|+|+|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 3569999997 9999999999999986 4489999975
No 480
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.37 E-value=0.61 Score=43.19 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=32.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcch
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 252 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 252 (497)
-++|.|||+|..|..+|..+++.|.+|+++++.+..+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDAL 40 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 3689999999999999999999999999998776443
No 481
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.32 E-value=1.5 Score=43.14 Aligned_cols=105 Identities=19% Similarity=0.280 Sum_probs=0.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccC-------HHHHHHHHHHHHHCCcEEEcCCeEEEEEeCC
Q 010917 216 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFT-------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 288 (497)
Q Consensus 216 ~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~-------~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~ 288 (497)
+.+..|||.|+.|.-+|..|++.|.+|+.+.+.+........ +.+.+.+.+.+....+.+-.+..
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~-------- 82 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPE-------- 82 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCC--------
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchh--------
Q ss_pred CCcEEEEEeCCCcEEEcCEEEEeccCcCCCc---------c---hhhcCCcccCCCEEecCCCCCCCCc
Q 010917 289 DGRVAAVKLEDGSTIDADTIVIGIGAKPTVS---------P---FERVGLNSSVGGIQVDGQFRTRMPG 345 (497)
Q Consensus 289 ~~~v~~v~~~~g~~i~~D~vv~a~G~~p~~~---------~---~~~~gl~~~~g~i~vd~~~~t~~~~ 345 (497)
.+|.+|+|++...+.+ + .+.+.-....|.+.|+.. |..|+
T Consensus 83 ---------------~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S--TV~pg 134 (431)
T 3ojo_A 83 ---------------ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES--TIAPK 134 (431)
T ss_dssp ---------------CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS--CCCTT
T ss_pred ---------------hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec--CCChh
No 482
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.24 E-value=0.51 Score=43.44 Aligned_cols=34 Identities=12% Similarity=0.254 Sum_probs=30.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 95 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 95 (497)
..++++|+|+|.+|.++|..|++.|. +|+++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~---~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDC---AVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCC---EEEEEECC
Confidence 45789999999999999999999985 89998875
No 483
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.18 E-value=0.19 Score=41.34 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=29.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.++|+|||+|..|...|..|.+.|+ +|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~---~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQY---KVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTC---EEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---EEEEEcCCH
Confidence 5799999999999999999998876 688888753
No 484
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.15 E-value=0.45 Score=45.69 Aligned_cols=36 Identities=19% Similarity=0.468 Sum_probs=32.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 97 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~ 97 (497)
..+|+|||+|-.|..+|..|++.|. ++++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGv--g~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGI--GEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC--SEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC--CeEEEECCCcC
Confidence 5799999999999999999999996 48999998754
No 485
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.03 E-value=0.9 Score=45.30 Aligned_cols=78 Identities=12% Similarity=0.106 Sum_probs=52.7
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEEEEEeCCCCcEEE
Q 010917 215 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 294 (497)
Q Consensus 215 ~~~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~~~~v~~ 294 (497)
.+++|+|||+|.+|...+..|.+.|.+|+++.+.. .+++ .+..++.+++++.+.. +
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~-------~~~~----~~l~~~~~i~~~~~~~----~--------- 66 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF-------IPQF----TVWANEGMLTLVEGPF----D--------- 66 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC-------CHHH----HHHHTTTSCEEEESSC----C---------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC-------CHHH----HHHHhcCCEEEEECCC----C---------
Confidence 47899999999999999999999999999998642 2322 2323335666654321 1
Q ss_pred EEeCCCcEEEcCEEEEeccCc-CCCcc
Q 010917 295 VKLEDGSTIDADTIVIGIGAK-PTVSP 320 (497)
Q Consensus 295 v~~~~g~~i~~D~vv~a~G~~-p~~~~ 320 (497)
.+..-.+|.||.|+|.. .|..+
T Consensus 67 ----~~~l~~~~lVi~at~~~~~n~~i 89 (457)
T 1pjq_A 67 ----ETLLDSCWLAIAATDDDTVNQRV 89 (457)
T ss_dssp ----GGGGTTCSEEEECCSCHHHHHHH
T ss_pred ----ccccCCccEEEEcCCCHHHHHHH
Confidence 11111478999999876 34433
No 486
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.85 E-value=0.5 Score=44.34 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=29.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+|.|||+|.-|...|..|++.|+ +|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN---DVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC---cEEEEECCH
Confidence 489999999999999999999997 899998753
No 487
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=87.83 E-value=0.48 Score=49.37 Aligned_cols=35 Identities=29% Similarity=0.268 Sum_probs=32.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 251 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 251 (497)
..|+|||+|..|+.+|..|++.|.+|+++++.+..
T Consensus 47 ~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~ 81 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEID 81 (623)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCC
Confidence 47999999999999999999999999999987644
No 488
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.81 E-value=0.43 Score=46.88 Aligned_cols=34 Identities=15% Similarity=0.415 Sum_probs=31.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+.+|+|||.|.-|...|..|.+.|+ +|++||.++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~---~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV---KMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 3589999999999999999999998 899999875
No 489
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.79 E-value=0.6 Score=43.07 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=30.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+++|+|.|+|.-|...+..|.++|+ +|+++++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH---EVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 4689999999999999999999998 899998864
No 490
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.76 E-value=0.59 Score=41.11 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=30.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
...+|.|||+|.-|.+.|..|++.|+ +|+++++++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~---~V~~~~~~~ 52 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH---EVTYYGSKD 52 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC---EEEEECTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 34689999999999999999999987 899998764
No 491
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.73 E-value=0.6 Score=44.07 Aligned_cols=36 Identities=19% Similarity=0.405 Sum_probs=30.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 95 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 95 (497)
.+.||+|||+|..|.+.|..|+..++ ..+|.|+|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 34699999999999999999999875 4589999865
No 492
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=87.72 E-value=0.71 Score=44.93 Aligned_cols=38 Identities=18% Similarity=0.332 Sum_probs=33.1
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 98 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~~~ 98 (497)
...++|+|||+|..|...+..+++.|+ ++.+++..+..
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~---~vi~~d~~~~~ 49 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGY---KIAVLDPTKNS 49 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCCC
Confidence 346799999999999999999999998 89999876543
No 493
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.68 E-value=0.5 Score=44.65 Aligned_cols=93 Identities=14% Similarity=0.035 Sum_probs=0.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCC-CcEEEEecCCcchhhccCHHHHHHHHHHHHHCCcEEEcCCeEE-EEEeCCCCcEEE
Q 010917 217 KKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIK-NLEAGSDGRVAA 294 (497)
Q Consensus 217 ~~vvVvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~-~i~~~~~~~v~~ 294 (497)
.+|.|||.|..|.-+|..|++.| .+|+++.+.+....+ .+...+.+.+.|+ .. ....-
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~------~~~~~~~~~~~g~-------~~~s~~e~------- 84 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAA------SGALRARAAELGV-------EPLDDVAG------- 84 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTT------HHHHHHHHHHTTC-------EEESSGGG-------
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccc------hHHHHHHHHHCCC-------CCCCHHHH-------
Q ss_pred EEeCCCcEEEcCEEEEeccCcCCCcchhhcCCcccCCCEEec
Q 010917 295 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVD 336 (497)
Q Consensus 295 v~~~~g~~i~~D~vv~a~G~~p~~~~~~~~gl~~~~g~i~vd 336 (497)
.-.+|.||+|+......+.++.+.-....+.+.+|
T Consensus 85 -------~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 85 -------IACADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp -------GGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred -------HhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
No 494
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.67 E-value=0.56 Score=44.29 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=30.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~---~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4789999999999999999999998 899999875
No 495
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.63 E-value=0.55 Score=45.44 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 59 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 59 ~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
..++|+|+|+|..|..+|..|+..|. +|+++++.+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga---~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA---QVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 34799999999999999999999987 899998753
No 496
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.62 E-value=0.53 Score=45.13 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=29.7
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+|.|||+|.-|...|..|++.|+ +|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~---~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ---SVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 589999999999999999999987 799998753
No 497
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.59 E-value=0.59 Score=44.09 Aligned_cols=35 Identities=11% Similarity=0.291 Sum_probs=30.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 61 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 61 ~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
.+|+|||+|.-|...|..|++.|+ ..+|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 589999999999999999999886 34799998763
No 498
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=87.57 E-value=0.62 Score=43.17 Aligned_cols=36 Identities=25% Similarity=0.417 Sum_probs=31.1
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 010917 58 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 95 (497)
Q Consensus 58 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 95 (497)
...++++|+|+|-+|-+++..|++.|.. +|+++++.
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~--~v~i~~R~ 160 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQ--KLQVADLD 160 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCC--EEEEEECC
Confidence 4568999999999999999999999863 69998776
No 499
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.53 E-value=0.44 Score=43.99 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=30.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 96 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~~ 96 (497)
+++|+|.|+|.-|...+..|.++|+ +|+.+.+.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW---RIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC---EEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC---EEEEEEcCh
Confidence 4689999999999999999999998 899987753
No 500
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=87.50 E-value=0.59 Score=44.48 Aligned_cols=33 Identities=21% Similarity=0.445 Sum_probs=29.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 010917 60 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 95 (497)
Q Consensus 60 ~~~VvIIGgG~AGl~aA~~L~~~g~~~~~V~lie~~ 95 (497)
..+|.|||+|.-|...|..|++.|+ +|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~---~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE---AINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC---CEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC---EEEEEECh
Confidence 3589999999999999999999997 79999864
Done!