Query 010918
Match_columns 497
No_of_seqs 150 out of 193
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 17:00:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010918.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010918hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jdh_A Beta-catenin; beta-cate 99.2 3.2E-09 1.1E-13 110.5 24.2 348 24-459 30-394 (529)
2 2z6h_A Catenin beta-1, beta-ca 98.9 1.8E-07 6.2E-12 101.7 24.5 354 19-459 22-391 (644)
3 4hxt_A De novo protein OR329; 98.9 3.9E-08 1.3E-12 91.8 15.7 242 54-453 4-245 (252)
4 3tpo_A Importin subunit alpha- 98.9 1.2E-07 4E-12 101.0 20.7 328 15-460 77-418 (529)
5 3nmw_A APC variant protein; AR 98.8 1.8E-08 6.1E-13 103.6 13.1 284 27-456 48-341 (354)
6 3nmz_A APC variant protein; pr 98.8 1.2E-07 4E-12 100.9 18.5 342 14-453 32-454 (458)
7 4b8j_A Importin subunit alpha- 98.8 5.6E-07 1.9E-11 94.7 23.4 351 15-453 75-447 (528)
8 2z6g_A B-catenin; FULL-length, 98.8 4.9E-07 1.7E-11 101.4 24.2 348 25-460 164-528 (780)
9 4db8_A Armadillo-repeat protei 98.8 1.5E-07 5.1E-12 88.8 17.1 243 49-449 9-251 (252)
10 3ul1_B Importin subunit alpha- 98.8 7.9E-07 2.7E-11 94.4 22.6 293 16-460 59-356 (510)
11 3ul1_B Importin subunit alpha- 98.7 1.3E-07 4.3E-12 100.5 14.3 278 29-459 119-398 (510)
12 1jdh_A Beta-catenin; beta-cate 98.7 2.6E-06 8.8E-11 88.5 23.6 121 14-144 59-183 (529)
13 2jdq_A Importin alpha-1 subuni 98.7 1.4E-06 4.7E-11 88.5 20.6 353 16-455 22-396 (450)
14 3tpo_A Importin subunit alpha- 98.6 1.3E-06 4.6E-11 92.9 20.3 285 68-460 88-375 (529)
15 1wa5_B Importin alpha subunit; 98.6 2.1E-06 7E-11 90.7 20.2 351 15-453 88-461 (530)
16 2z6h_A Catenin beta-1, beta-ca 98.6 6.7E-06 2.3E-10 89.4 24.1 132 14-155 56-191 (644)
17 4b8j_A Importin subunit alpha- 98.6 2.7E-06 9.4E-11 89.4 20.3 322 54-459 76-411 (528)
18 2z6g_A B-catenin; FULL-length, 98.6 1.2E-05 4E-10 90.2 26.2 124 14-147 192-319 (780)
19 2jdq_A Importin alpha-1 subuni 98.4 1.6E-05 5.4E-10 80.6 20.0 318 54-457 22-356 (450)
20 1wa5_B Importin alpha subunit; 98.4 8.9E-06 3E-10 85.8 18.7 356 14-452 130-513 (530)
21 1xm9_A Plakophilin 1; armadill 98.4 1.4E-05 4.9E-10 83.8 19.4 132 54-197 4-136 (457)
22 4db6_A Armadillo repeat protei 98.4 8.2E-07 2.8E-11 81.5 8.4 170 14-193 15-185 (210)
23 1xm9_A Plakophilin 1; armadill 98.2 0.00019 6.4E-09 75.2 23.2 376 24-450 15-450 (457)
24 4hxt_A De novo protein OR329; 98.2 3E-06 1E-10 78.9 8.5 170 14-193 44-217 (252)
25 3l6x_A Catenin delta-1; cateni 98.1 4.6E-05 1.6E-09 83.4 17.5 133 54-198 50-184 (584)
26 4db8_A Armadillo-repeat protei 98.0 1.3E-05 4.3E-10 75.5 9.2 169 14-192 15-184 (252)
27 3grl_A General vesicular trans 98.0 3E-05 1E-09 85.4 12.9 261 67-461 133-406 (651)
28 3l6x_A Catenin delta-1; cateni 98.0 0.00076 2.6E-08 73.8 23.7 393 15-462 49-488 (584)
29 3now_A UNC-45 protein, SD10334 97.9 0.00051 1.7E-08 77.8 21.5 341 24-449 392-782 (810)
30 3nmw_A APC variant protein; AR 97.8 3.2E-05 1.1E-09 79.3 7.5 164 14-183 170-342 (354)
31 1xqr_A HSPBP1 protein; armadil 97.8 3.7E-05 1.3E-09 77.1 7.3 160 28-197 57-218 (296)
32 4db6_A Armadillo repeat protei 97.7 9.1E-05 3.1E-09 67.7 8.9 132 51-192 11-142 (210)
33 3nmz_A APC variant protein; pr 97.7 4.5E-05 1.5E-09 81.0 7.4 163 14-182 286-457 (458)
34 1xqr_A HSPBP1 protein; armadil 97.6 0.00067 2.3E-08 67.9 13.6 159 16-183 83-246 (296)
35 3now_A UNC-45 protein, SD10334 97.5 0.0037 1.3E-07 70.8 19.0 310 70-462 393-750 (810)
36 3tt9_A Plakophilin-2; cell adh 97.1 0.0004 1.4E-08 67.5 5.2 70 391-462 25-94 (233)
37 3grl_A General vesicular trans 96.7 0.035 1.2E-06 61.3 16.8 116 315-463 231-356 (651)
38 3tt9_A Plakophilin-2; cell adh 96.0 0.0038 1.3E-07 60.6 4.0 114 53-174 9-123 (233)
39 4gmo_A Putative uncharacterize 88.9 0.44 1.5E-05 52.4 6.0 134 311-460 91-225 (684)
40 4gmo_A Putative uncharacterize 84.8 2.9 9.8E-05 45.9 9.6 164 22-188 45-227 (684)
41 3opb_A SWI5-dependent HO expre 79.7 1.2 4E-05 50.3 4.0 120 73-199 576-708 (778)
42 1n4k_A Inositol 1,4,5-trisphos 72.9 20 0.00067 36.9 10.8 123 315-452 249-380 (381)
43 3opb_A SWI5-dependent HO expre 64.6 9.5 0.00033 43.0 6.8 66 388-454 469-536 (778)
44 4fdd_A Transportin-1; heat rep 51.0 2.8E+02 0.0094 30.3 18.6 98 28-136 376-474 (852)
45 1n4k_A Inositol 1,4,5-trisphos 45.6 56 0.0019 33.4 8.3 63 90-153 283-361 (381)
46 3eg5_B Protein diaphanous homo 30.1 77 0.0026 32.3 6.4 72 69-146 133-206 (383)
47 2xoa_A Ryanodine receptor 1; m 25.2 1.4E+02 0.0048 32.1 7.6 62 90-152 474-549 (559)
48 3dad_A FH1/FH2 domain-containi 20.1 1.7E+02 0.0059 29.7 6.6 116 26-147 130-245 (339)
No 1
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.18 E-value=3.2e-09 Score=110.46 Aligned_cols=348 Identities=14% Similarity=0.103 Sum_probs=213.9
Q ss_pred ccCchHHHHHHHHHhcccccCCcccc-cccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHH
Q 010918 24 NSSSLKDALEILIESSKTTVGRSDLA-SKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGI 102 (497)
Q Consensus 24 ~~~~~~~~l~~L~~~~k~~~~R~~~a-~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~ 102 (497)
+..--+.+.+.|..+++...+|..+. .+..++.+.++|++. +.......+.+.|||++.. ..|+..|.+.+++..
T Consensus 30 ~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~---~~~~~~~~a~~~L~~ls~~-~~~~~~i~~~g~i~~ 105 (529)
T 1jdh_A 30 DQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT---NDVETARCTAGTLHNLSHH-REGLLAIFKSGGIPA 105 (529)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcC---CCHHHHHHHHHHHHHHHcC-chhHHHHHHcCCHHH
Confidence 33446789999999999888775443 236778888888642 2445667789999998765 559999999999999
Q ss_pred HHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhH
Q 010918 103 VLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFK 182 (497)
Q Consensus 103 ~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~ 182 (497)
+.+++... +..+.+.++..|+|++..++..+..+...-.-..+..++..++.++....+..+.+...++.+...
T Consensus 106 L~~lL~~~------~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~ 179 (529)
T 1jdh_A 106 LVKMLGSP------VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKL 179 (529)
T ss_dssp HHHHTTCS------CHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHcCC------CHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 98888653 245778999999999999999999998776556677788777666655555566666655555555
Q ss_pred hhhcccchHHHHHHHHHHhhcCCcchhHHHHHH-------------HHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCC
Q 010918 183 ELCGDKGLAIMAEIVCTAASVGFKEDWFKFLVS-------------RTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGT 249 (497)
Q Consensus 183 eL~~~~~i~i~~e~v~~a~~~~~d~ewl~lli~-------------~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~ 249 (497)
.+....+++.++.++.+. +.+...+-.. ..+++.+-++.+...+.. .
T Consensus 180 ~i~~~~~i~~L~~ll~~~-----~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~---------------~ 239 (529)
T 1jdh_A 180 IILASGGPQALVNIMRTY-----TYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTD---------------P 239 (529)
T ss_dssp HHHHTTHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTS---------------S
T ss_pred HHHHCCCHHHHHHHHHhC-----ChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhC---------------C
Confidence 555556677666665432 2221221111 112222222233332210 0
Q ss_pred CChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCC
Q 010918 250 FSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDP 329 (497)
Q Consensus 250 ~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~ 329 (497)
...-+...+..+.......+....+ .+....+...+ + +. ..++...+...|..+|...
T Consensus 240 ~~~~~~~a~~~L~~l~~~~~~~~~~-~~~i~~L~~ll-----------~------~~--~~~v~~~a~~~L~~L~~~~-- 297 (529)
T 1jdh_A 240 SQRLVQNCLWTLRNLSDAATKQEGM-EGLLGTLVQLL-----------G------SD--DINVVTCAAGILSNLTCNN-- 297 (529)
T ss_dssp CHHHHHHHHHHHHHHHTTCTTCSCC-HHHHHHHHHHT-----------T------CS--CHHHHHHHHHHHHHHTTTC--
T ss_pred ChHHHHHHHHHHHHHhcCChhhHHH-HhHHHHHHHHH-----------c------CC--CHHHHHHHHHHHHHHhcCC--
Confidence 0111222222222222111110000 01111111100 0 00 1122234566677766411
Q ss_pred CCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChh
Q 010918 330 AGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKH 409 (497)
Q Consensus 330 ~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~ 409 (497)
++....+...|.+..++.+|+.-. .....+...++.++|++..++.
T Consensus 298 --------~~~~~~~~~~~~v~~L~~ll~~~~--------------------------~~~~v~~~a~~~L~nl~~~~~~ 343 (529)
T 1jdh_A 298 --------YKNKMMVCQVGGIEALVRTVLRAG--------------------------DREDITEPAICALRHLTSRHQE 343 (529)
T ss_dssp --------HHHHHHHHHTTHHHHHHHHHHHHT--------------------------TCHHHHHHHHHHHHHHTSSSTT
T ss_pred --------HHHHHHHHHcCChHHHHHHHHccC--------------------------CHHHHHHHHHHHHHHHHcCCch
Confidence 134567778899999988886311 0126778889999999998765
Q ss_pred ---hHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHHHHH
Q 010918 410 ---IQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQKVVA 459 (497)
Q Consensus 410 ---~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~ 459 (497)
.|+.+++.||+|.++.... ++++|.+++.+.++++|++.+ +++|+.+.
T Consensus 344 ~~~~~~~i~~~~~i~~L~~lL~-~~~~~~v~~~a~~~l~nl~~~-~~~~~~~~ 394 (529)
T 1jdh_A 344 AEMAQNAVRLHYGLPVVVKLLH-PPSHWPLIKATVGLIRNLALC-PANHAPLR 394 (529)
T ss_dssp HHHHHHHHHHTTCHHHHHHTTS-TTCCHHHHHHHHHHHHHHTTS-GGGHHHHH
T ss_pred HHHHHHHHHHcCChhHHHHHhc-cccchHHHHHHHHHHHHHhcC-hhhhHHHH
Confidence 5889999999999988755 344569999999999999985 55665554
No 2
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.90 E-value=1.8e-07 Score=101.68 Aligned_cols=354 Identities=14% Similarity=0.111 Sum_probs=212.9
Q ss_pred hhhccccCchHHHHHHHHHhcccccCCccccc-ccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhc
Q 010918 19 LLTTSNSSSLKDALEILIESSKTTVGRSDLAS-KNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQ 97 (497)
Q Consensus 19 ~~~~~~~~~~~~~l~~L~~~~k~~~~R~~~a~-~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~ 97 (497)
|+...+..--+.+++.|..+++...+|..+.. ..+++.+.+.|++ ....+.-..+.+.|||+|.. ..|...|.+.
T Consensus 22 lL~~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~---~~~~~~~~~A~~~L~~Ls~~-~~~~~~i~~~ 97 (644)
T 2z6h_A 22 LLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQN---TNDVETARCTAGTLHNLSHH-REGLLAIFKS 97 (644)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHTTS-HHHHHHHHTT
T ss_pred HHcCCCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhc---CCCHHHHHHHHHHHHHHhcC-hhhHHHHHHc
Confidence 33433444477889999999998887764432 3667777777764 22455667788899998876 4599999999
Q ss_pred chhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCC
Q 010918 98 TGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGS 177 (497)
Q Consensus 98 ~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s 177 (497)
+++..+..++... +..+.+.++..|+|++..++..+..+-..-.-..+..++..++.++....+..|.++..++
T Consensus 98 g~i~~Lv~lL~~~------~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~ 171 (644)
T 2z6h_A 98 GGIPALVKMLGSP------VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGN 171 (644)
T ss_dssp THHHHHHHHTTCS------SHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhCC------CHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcC
Confidence 9999998888663 2457889999999999999888888886554445667777666565555556677776555
Q ss_pred chhhHhhhcccchHHHHHHHHHHhhcCCcch--hHHHHHH----------HHhHhcCcHHHHHHhhhhcCCCcccCCCCC
Q 010918 178 SGLFKELCGDKGLAIMAEIVCTAASVGFKED--WFKFLVS----------RTCVEEIHFPQLFFKLSQVGASRNCEDSNS 245 (497)
Q Consensus 178 ~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e--wl~lli~----------~~~le~~~l~~ly~~ls~~~~~~~~e~~~~ 245 (497)
.+....+....++..++.++... ..++ |.-.-+- ..+++.+-++.+...+.
T Consensus 172 ~~~~~~i~~~g~v~~Lv~lL~~~----~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~------------- 234 (644)
T 2z6h_A 172 QESKLIILASGGPQALVNIMRTY----TYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLT------------- 234 (644)
T ss_dssp HHHHHHHHHTTHHHHHHHHHTTC----CCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTT-------------
T ss_pred cHHHHHHHHcCChHHHHHHHHcC----ChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHh-------------
Confidence 55555555555666665555421 1111 3211111 11222222222222221
Q ss_pred CCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhh
Q 010918 246 REGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICA 325 (497)
Q Consensus 246 ~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~ 325 (497)
.....-+...+..+.......+....+ .+....+. +. + +. .. .++...+...|..||.
T Consensus 235 --~~~~~~~~~a~~~L~nL~~~~~~~~~~-~~~i~~Lv----~l---L----~~------~d--~~v~~~a~~aL~~L~~ 292 (644)
T 2z6h_A 235 --DPSQRLVQNCLWTLRNLSDAATKQEGM-EGLLGTLV----QL---L----GS------DD--INVVTCAAGILSNLTC 292 (644)
T ss_dssp --CSCHHHHHHHHHHHHHHGGGCTTCCSC-HHHHHHHH----HH---T----TC------SC--HHHHHHHHHHHHHHHT
T ss_pred --cCCHHHHHHHHHHHHHHhhcchhhhhh-hhHHHHHH----HH---H----cC------CC--HHHHHHHHHHHHHHHc
Confidence 001122222222222222211110000 01111111 10 0 00 00 1222345666666664
Q ss_pred ccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhcc
Q 010918 326 REDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAY 405 (497)
Q Consensus 326 ~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~ 405 (497)
.. ++....+...|.+..++.+|..-.. ....+...++.|+|++.
T Consensus 293 ~~----------~~~~~~v~~~g~v~~Lv~lL~~~~~--------------------------~~~v~~~a~~aL~nL~~ 336 (644)
T 2z6h_A 293 NN----------YKNKMMVCQVGGIEALVRTVLRAGD--------------------------REDITEPAICALRHLTS 336 (644)
T ss_dssp TC----------HHHHHHHHHTTHHHHHHHHHHHHTT--------------------------CHHHHHHHHHHHHHHTS
T ss_pred CC----------HHHHHHHHHcCCHHHHHHHHHccCC--------------------------cHHHHHHHHHHHHHHhc
Confidence 11 1235567778999999888863110 12678889999999998
Q ss_pred CCh---hhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHHHHH
Q 010918 406 RRK---HIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQKVVA 459 (497)
Q Consensus 406 ~~~---~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~ 459 (497)
.++ ..|..+++.+|++.+++...- +++|-+++.|.++++||..+ +++|+.+.
T Consensus 337 ~~~~~~~~q~~v~~~~~l~~L~~lL~~-~~~~~v~~~a~~~L~nLa~~-~~~~~~i~ 391 (644)
T 2z6h_A 337 RHQEAEMAQNAVRLHYGLPVVVKLLHP-PSHWPLIKATVGLIRNLALC-PANHAPLR 391 (644)
T ss_dssp SSTTHHHHHHHHHHTTHHHHHHHTTST-TCCHHHHHHHHHHHHHHTTS-GGGHHHHH
T ss_pred CCchHHHHHHHHHHccChHHHHHHhCc-cCchHHHHHHHHHHHHHccC-HHHHHHHH
Confidence 766 578889999999999887653 35678999999999999986 45665554
No 3
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=98.88 E-value=3.9e-08 Score=91.79 Aligned_cols=242 Identities=15% Similarity=0.171 Sum_probs=167.4
Q ss_pred hHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHh
Q 010918 54 LPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSL 133 (497)
Q Consensus 54 ~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~ 133 (497)
.+.+.+.|++ ...+.-..+.+.|+|+|.+...|...+++.+++..+.+++.... ..+.+.++..|+|++.
T Consensus 4 i~~L~~~L~~----~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~------~~v~~~a~~~L~~l~~ 73 (252)
T 4hxt_A 4 VEKLVKLLTS----TDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTD------SEVQKEAARALANIAS 73 (252)
T ss_dssp HHHHHHHTTC----SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSC------HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcC----CCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCC------HHHHHHHHHHHHHHHc
Confidence 4556666653 23566788899999999999999999999999999998887632 4577799999999999
Q ss_pred cCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcchhHHHH
Q 010918 134 AGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKEDWFKFL 213 (497)
Q Consensus 134 ~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~ewl~ll 213 (497)
.+++.+..+...-.-..+..+++.++.++....+.+|.++..++++...
T Consensus 74 ~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~------------------------------- 122 (252)
T 4hxt_A 74 GPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK------------------------------- 122 (252)
T ss_dssp SCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHH-------------------------------
T ss_pred CChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999998876555566677655555544444444444422111111
Q ss_pred HHHHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhh
Q 010918 214 VSRTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLV 293 (497)
Q Consensus 214 i~~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v 293 (497)
.+++.+-++.+..-+. +.
T Consensus 123 ---~~~~~~~i~~L~~~l~----------------------------------~~------------------------- 140 (252)
T 4hxt_A 123 ---AIVDAGGVEVLVKLLT----------------------------------ST------------------------- 140 (252)
T ss_dssp ---HHHHTTHHHHHHHHTT----------------------------------CS-------------------------
T ss_pred ---HHHHCCCHHHHHHHHc----------------------------------CC-------------------------
Confidence 1112222233333221 00
Q ss_pred hhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcC
Q 010918 294 DFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQG 373 (497)
Q Consensus 294 ~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~ 373 (497)
. .++-..++..|..++... ++....+...|.+..++.+|+.
T Consensus 141 -------------~--~~~~~~a~~~L~~l~~~~----------~~~~~~~~~~~~i~~L~~ll~~-------------- 181 (252)
T 4hxt_A 141 -------------D--SEVQKEAARALANIASGP----------DEAIKAIVDAGGVEVLVKLLTS-------------- 181 (252)
T ss_dssp -------------C--HHHHHHHHHHHHHHTTSC----------HHHHHHHHHTTHHHHHHHHTTC--------------
T ss_pred -------------C--HHHHHHHHHHHHHHHcCC----------HHHHHHHHHCcCHHHHHHHHCC--------------
Confidence 0 011123466666666411 1234567778999998888852
Q ss_pred CCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChH
Q 010918 374 ENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAE 453 (497)
Q Consensus 374 ~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~ 453 (497)
+-...+...++.++|++..++..+..+.+.|+++.+++... +.+|-+|+.|.++++||+...+.
T Consensus 182 --------------~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~ll~--~~~~~v~~~a~~~L~~l~~~~~~ 245 (252)
T 4hxt_A 182 --------------TDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLT--STDSEVQKEAQRALENIKSGGWL 245 (252)
T ss_dssp --------------SCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGGG--CSCHHHHHHHHHHHHHHHHTCBC
T ss_pred --------------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHC--CCcHHHHHHHHHHHHHHHcCCCc
Confidence 11277888999999999999999999999999999999875 56889999999999999987653
No 4
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.86 E-value=1.2e-07 Score=101.00 Aligned_cols=328 Identities=14% Similarity=0.204 Sum_probs=195.2
Q ss_pred hhhhhhhccccCchHHHHHHHHHh----ccccc-CCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch
Q 010918 15 VLQPLLTTSNSSSLKDALEILIES----SKTTV-GRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT 89 (497)
Q Consensus 15 ~~~~~~~~~~~~~~~~~l~~L~~~----~k~~~-~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~ 89 (497)
.++.+...-+|.+.+..++++..+ |++.. -...+..-.+.|.+.++|++ ..+-++-.++.++|.|+|.+.+.
T Consensus 77 ~l~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~---~~~~~~q~~Aa~aL~nia~~~~~ 153 (529)
T 3tpo_A 77 SVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGK---TDCSPIQFESAWALTNIASGTSE 153 (529)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTC---TTCHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcC---CCCHHHHHHHHHHHHHHHcCCHH
Confidence 355566666777776666655544 33221 11223344667888888864 33445667788999999999999
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccC-----
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCD----- 164 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~----- 164 (497)
+...+++.|.+..+.+++.+.. ..+...++..|||++..++.+++.|..+-....+..++..++.+...
T Consensus 154 ~~~~vv~~Gaip~Lv~LL~s~~------~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~~~~~~~~~~ 227 (529)
T 3tpo_A 154 QTKAVVDGGAIPAFISLLASPH------AHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLR 227 (529)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSC------HHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCGGGSCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCCC------HHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccchhHhHHHHHH
Confidence 9999999999999988887643 34677889999999999999999999997777788888766654322
Q ss_pred ceeeeehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcch---hHHHHHHHHhHhcCcHHHHHHhhhhcCCCcccC
Q 010918 165 PLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKED---WFKFLVSRTCVEEIHFPQLFFKLSQVGASRNCE 241 (497)
Q Consensus 165 ~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e---wl~lli~~~~le~~~l~~ly~~ls~~~~~~~~e 241 (497)
..+..+.+++.+.............++.++.++ . +.+.+ +.-|.+. .++.
T Consensus 228 ~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL----~-~~~~~v~~~a~~aL~--------------~l~~-------- 280 (529)
T 3tpo_A 228 NLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL----H-HNDPEVLADSCWAIS--------------YLTD-------- 280 (529)
T ss_dssp HHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHT----T-SSCHHHHHHHHHHHH--------------HHHS--------
T ss_pred HHHHHHHHHHhcccchhhHHHHhhHHHHHHHHh----c-CCcHHHHHHHHHHHH--------------Hhhh--------
Confidence 122333333322111100000001122221111 1 11211 1111111 1110
Q ss_pred CCCCCCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHH
Q 010918 242 DSNSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILR 321 (497)
Q Consensus 242 ~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~ 321 (497)
.++++... .+. .+....+...+. . . ...+...++..+.
T Consensus 281 --------~~~~~~~~------v~~---------~g~i~~Lv~lL~-----------~------~--~~~v~~~a~~aL~ 318 (529)
T 3tpo_A 281 --------GPNERIEM------VVK---------KGVVPQLVKLLG-----------A------T--ELPIVTPALRAIG 318 (529)
T ss_dssp --------SCHHHHHH------HHT---------TTCHHHHHHHHT-----------C------S--CHHHHHHHHHHHH
T ss_pred --------hhhhhHHH------HHh---------ccchHHHHHHhc-----------C------C--ChhHHHHHHHHHH
Confidence 01111000 000 011111111110 0 0 0122234566777
Q ss_pred HHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHH
Q 010918 322 NICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIG 401 (497)
Q Consensus 322 ~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~ 401 (497)
.++..+ ++....+...|.+..++.+|+. +-..+|...+..|+
T Consensus 319 nl~~~~----------~~~~~~i~~~g~l~~L~~LL~~----------------------------~~~~i~~~a~~aL~ 360 (529)
T 3tpo_A 319 NIVTGT----------DEQTQKVIDAGALAVFPSLLTN----------------------------PKTNIQKEATWTMS 360 (529)
T ss_dssp HHTTSC----------HHHHHHHHHTTGGGGHHHHTTC----------------------------SSHHHHHHHHHHHH
T ss_pred HHHccc----------hHHHHHHhhcccHHHHHHHHcC----------------------------CCHHHHHHHHHHHH
Confidence 766321 1234566778888888777752 12367888999999
Q ss_pred hhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcC-ChHHHHHHHh
Q 010918 402 NCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEG-NAENQKVVAD 460 (497)
Q Consensus 402 nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~-n~~nQ~~i~~ 460 (497)
|++..++.....+.+.|++|.++.... ..++-+|+.|.|||.|++.+ ++++...+.+
T Consensus 361 nl~~~~~~~~~~v~~~g~i~~Lv~lL~--~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~ 418 (529)
T 3tpo_A 361 NITAGRQDQIQQVVNHGLVPFLVGVLS--KADFKTQKAAAWAITNYTSGGTVEQIVYLVH 418 (529)
T ss_dssp HHHTSCHHHHHHHHHTTHHHHHHHHHH--SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHhcccHHHHHHHHhcCcHHHHHHHhc--CCCHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 999999999999999999999887653 56788999999999999874 5666555443
No 5
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=98.84 E-value=1.8e-08 Score=103.61 Aligned_cols=284 Identities=15% Similarity=0.160 Sum_probs=188.5
Q ss_pred chHHHHHHHHHhcccccCCcccccccchHHHHHhhhcC-------CCCCcHHHHHHHHHHHHhhccccchhhhHHhhcch
Q 010918 27 SLKDALEILIESSKTTVGRSDLASKNILPEVLQLTQSI-------PHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTG 99 (497)
Q Consensus 27 ~~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~il~~~-------s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~ 99 (497)
...-|+++|.++|...++|..+..-...+-+..+|++- ....+..+-..+...|+|+|.+...|...|+..+|
T Consensus 48 ~~~~A~~aL~nls~d~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~G 127 (354)
T 3nmw_A 48 QICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKG 127 (354)
T ss_dssp THHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCC
Confidence 35678999999999999999888888999999998531 11233456778889999999999889989987777
Q ss_pred -hHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhc-CcccHHHHHhh-hchhHHHHHhcCCCCCccCceeeeehhhccC
Q 010918 100 -VGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLA-GETHQHAIWCQ-FFPDEFATLAGVRCQETCDPLCMVIYTCCDG 176 (497)
Q Consensus 100 -i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~-n~~~Q~~IW~~-~fP~~f~~ll~~~d~k~~~~~~MViytc~~~ 176 (497)
+..++.+|++. +..+...+.-.|+|++.+ |..++..|-.. ..|-+...++..++.++....+-.++|+...
T Consensus 128 aIp~LV~LL~s~------~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~ 201 (354)
T 3nmw_A 128 CMRALVAQLKSE------SEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAH 201 (354)
T ss_dssp HHHHHHHGGGCS------CHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHCCC------CHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcc
Confidence 78888888753 235777899999999986 77788888765 3555443344444433333333333333311
Q ss_pred CchhhHhhhcccchHHHHHHHHHHhhcCCcchhHHHHHHHHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCCCChhHhH
Q 010918 177 SSGLFKELCGDKGLAIMAEIVCTAASVGFKEDWFKFLVSRTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGTFSSEQAF 256 (497)
Q Consensus 177 s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~ewl~lli~~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqvt 256 (497)
+ .+. . .......+-++.|-..|.... +
T Consensus 202 ~-----------------------------~~n-k---~~i~~~~Gai~~Lv~lL~~~~----------------~---- 228 (354)
T 3nmw_A 202 C-----------------------------TEN-K---ADICAVDGALAFLVGTLTYRS----------------Q---- 228 (354)
T ss_dssp C-----------------------------HHH-H---HHHHHSTTHHHHHHHHTTCCC----------------S----
T ss_pred C-----------------------------hhh-h---HHHHHhcCcHHHHHHHhccCC----------------C----
Confidence 1 010 0 000112333333434332000 0
Q ss_pred HHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcc
Q 010918 257 LLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGSSSVN 336 (497)
Q Consensus 257 LL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~ 336 (497)
. .+ .++...+...|+.|+.+-. . .
T Consensus 229 -------------~---------------------------------~~----~~v~~~A~~aL~nLs~~~a--~-~--- 252 (354)
T 3nmw_A 229 -------------T---------------------------------NT----LAIIESGGGILRNVSSLIA--T-N--- 252 (354)
T ss_dssp -------------S---------------------------------SC----CHHHHHHHHHHHHHHHHHT--T-C---
T ss_pred -------------c---------------------------------cc----HHHHHHHHHHHHHHHhhcc--C-C---
Confidence 0 00 0011123445555553200 0 0
Q ss_pred hhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHH
Q 010918 337 RADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRE 416 (497)
Q Consensus 337 ~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~ 416 (497)
++....+.+.|.+..++.+|+. +-...|...+..|+|+++.+++++..+.+
T Consensus 253 -~~~~~~i~~~g~i~~Lv~lL~~----------------------------~~~~v~~~A~~aL~nLa~~~~~~~~~i~~ 303 (354)
T 3nmw_A 253 -EDHRQILRENNCLQTLLQHLKS----------------------------HSLTIVSNACGTLWNLSARNPKDQEALWD 303 (354)
T ss_dssp -HHHHHHHHTTTHHHHHHHHTTC----------------------------SCHHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred -HHHHHHHHHcCCHHHHHHHHcC----------------------------CChHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 1345677789999999999862 01247888899999999999999999999
Q ss_pred hcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHH
Q 010918 417 RDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQK 456 (497)
Q Consensus 417 ~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~ 456 (497)
.|+||.+.+. +...++-+||.|.+|++||+.++++.++
T Consensus 304 ~G~i~~Lv~L--L~s~~~~i~~~A~~aL~nL~~~~~~~~~ 341 (354)
T 3nmw_A 304 MGAVSMLKNL--IHSKHKMIAMGSAAALRNLMANRPAKYK 341 (354)
T ss_dssp TTHHHHHHTT--TTCSSHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred CCCHHHHHHH--HhCCCHHHHHHHHHHHHHHHcCCHHHHh
Confidence 9999999875 3567889999999999999999998766
No 6
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=98.81 E-value=1.2e-07 Score=100.94 Aligned_cols=342 Identities=14% Similarity=0.142 Sum_probs=204.3
Q ss_pred hhhhhhhhccccCchHHHHHHHHHhcccccCCcccccccchHHHHHhhhcCCC---------------------------
Q 010918 14 DVLQPLLTTSNSSSLKDALEILIESSKTTVGRSDLASKNILPEVLQLTQSIPH--------------------------- 66 (497)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~il~~~s~--------------------------- 66 (497)
+.+..|...-.|.+..|..+.|..+++++..|..+...-.+|.+.++|++...
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~ 111 (458)
T 3nmz_A 32 EMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCISMRQSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIH 111 (458)
T ss_dssp -------------CCHHHHHHHHHHHSSTTHHHHHHHHTCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHcCCcHHHHHHHCCCHHHHHHHHhcccccccccccccCCHHHHHHHHHHHHHHHc
Confidence 34455555567788889999999999999998878888899999999986321
Q ss_pred --C------------CcHH----HHHHHHHHHHhhc----------------------------cccchhhhHHhhcchh
Q 010918 67 --S------------SGCH----YLLLSLKLLRNLC----------------------------AGEITNQKSFIEQTGV 100 (497)
Q Consensus 67 --~------------~~~~----~l~~clR~LRNlC----------------------------a~~~~NQ~~i~~~~~i 100 (497)
+ +.++ +...++++++..| +.+++|...|++.|++
T Consensus 112 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qAv~aL~nls~~~e~R~~i~~~G~l 191 (458)
T 3nmz_A 112 SQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGL 191 (458)
T ss_dssp HSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCSCC--CCCTTTTHHHHHHHHHHTTSHHHHHHHHHTTHH
T ss_pred cCcchhHHHHHHHHHHHHHHhhhhhHHHHHHHHhhccccccccCCccchhhHHHHHHHHHHHHhcCCHHHHHHHHHCCCH
Confidence 0 0011 1133455555555 2358899999999999
Q ss_pred HHHHHHhcCC----CCCCC-chhHHHHHHHHHHHHHHhcCcccHHHHH--hhhchhHHHHHhcCCCCCccCceeeeehhh
Q 010918 101 GIVLRVLRSP----GVNLD-KDYGIIRIALQVLANVSLAGETHQHAIW--CQFFPDEFATLAGVRCQETCDPLCMVIYTC 173 (497)
Q Consensus 101 ~~~~~ll~~~----~~~~e-~~~~~~r~glQ~LgNia~~n~~~Q~~IW--~~~fP~~f~~ll~~~d~k~~~~~~MViytc 173 (497)
..+..+|... ....+ ....+.|.+...|.|++.+++..+..|= ..+.|. +..++..++.++....+-.|.|+
T Consensus 192 ~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~-LV~LL~s~~~~v~~~A~~aL~nL 270 (458)
T 3nmz_A 192 QAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRA-LVAQLKSESEDLQQVIASVLRNL 270 (458)
T ss_dssp HHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHH-HHHGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHH-HHHHHhCCCHHHHHHHHHHHHHH
Confidence 9998888421 11112 2356788999999999999887666552 223555 56678888888888888889888
Q ss_pred ccC-CchhhHhhhcccchHHHHHHHHHHhhcCCcchhHHHHHHHHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCCCCh
Q 010918 174 CDG-SSGLFKELCGDKGLAIMAEIVCTAASVGFKEDWFKFLVSRTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGTFSS 252 (497)
Q Consensus 174 ~~~-s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~ewl~lli~~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~ 252 (497)
..+ +.+.-..+.+..+++.+++++.. ..+.+-.. .-+..++. |+.. + ..
T Consensus 271 s~~~~~~~k~~I~~~GaI~~LV~lLl~----s~~~~v~~----------~A~~aL~n-Ls~~-----~----------~~ 320 (458)
T 3nmz_A 271 SWRADVNSKKTLREVGSVKALMECALE----VKKESTLK----------SVLSALWN-LSAH-----C----------TE 320 (458)
T ss_dssp TSSCCHHHHHHHHHTTHHHHHHHHHTT----CCSHHHHH----------HHHHHHHH-HHHH-----C----------HH
T ss_pred hcCCCHHHHHHHHHcCCHHHHHHHHhc----CCCHHHHH----------HHHHHHHH-HccC-----C----------HH
Confidence 754 33333333344566665544321 11222111 00112332 3310 0 01
Q ss_pred hHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCC
Q 010918 253 EQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGS 332 (497)
Q Consensus 253 eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~ 332 (497)
.|..+ ... . +....+..... ...+..+ .++...+...|+.|+.+-..
T Consensus 321 nk~~I-------~~~-~-------Gal~~Lv~LL~-----------~~~~~~~----~~v~~~A~~aL~nLs~~~a~--- 367 (458)
T 3nmz_A 321 NKADI-------CAV-D-------GALAFLVGTLT-----------YRSQTNT----LAIIESGGGILRNVSSLIAT--- 367 (458)
T ss_dssp HHHHH-------HHS-T-------THHHHHHHHTT-----------CCCSSST----THHHHHHHHHHHHHHHHHTT---
T ss_pred HHHHH-------HHh-c-------CcHHHHHHHhc-----------CCCCcch----HHHHHHHHHHHHHHHhcccC---
Confidence 11111 000 0 00011111110 0000000 01222355667777642100
Q ss_pred CCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHH
Q 010918 333 SSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQD 412 (497)
Q Consensus 333 ~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd 412 (497)
. ++....+...|.+..++.+|+. +-...|...+..|+|+++.+++++.
T Consensus 368 ~----~~~~~~i~~~G~i~~Lv~LL~~----------------------------~~~~v~~~A~~aL~nLa~~~~~~~~ 415 (458)
T 3nmz_A 368 N----EDHRQILRENNCLQTLLQHLKS----------------------------HSLTIVSNACGTLWNLSARNPKDQE 415 (458)
T ss_dssp C----HHHHHHHHHTTHHHHHHHHSSC----------------------------SCHHHHHHHHHHHHHHHSSCHHHHH
T ss_pred C----HHHHHHHHHcccHHHHHHHHcC----------------------------CChHHHHHHHHHHHHHHcCCHHHHH
Confidence 1 1345677789999999888862 1125788899999999999999999
Q ss_pred HHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChH
Q 010918 413 EIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAE 453 (497)
Q Consensus 413 ~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~ 453 (497)
.|.+.||||.+.+.- ...++-++|.|.+|++||+.+||+
T Consensus 416 ~i~~~G~I~~Lv~LL--~s~~~~v~~~Aa~AL~nL~~~~p~ 454 (458)
T 3nmz_A 416 ALWDMGAVSMLKNLI--HSKHKMIAMGSAAALRNLMANRPA 454 (458)
T ss_dssp HHHHHTHHHHHHTTT--TCSSHHHHHHHHHHHHHHHTCCSC
T ss_pred HHHHCCCHHHHHHHH--hCCCHHHHHHHHHHHHHHHcCCHh
Confidence 999999999998864 567889999999999999999875
No 7
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.81 E-value=5.6e-07 Score=94.66 Aligned_cols=351 Identities=15% Similarity=0.114 Sum_probs=214.5
Q ss_pred hhhhhhhccccCc---hHHHHHHHHHh-cccc-cCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch
Q 010918 15 VLQPLLTTSNSSS---LKDALEILIES-SKTT-VGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT 89 (497)
Q Consensus 15 ~~~~~~~~~~~~~---~~~~l~~L~~~-~k~~-~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~ 89 (497)
.+..|...-.|.+ -.++++.|..+ +++. ..+..+....+++.+.++|++ +.....-..+.++|.|+|.+.+.
T Consensus 75 ~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~---~~~~~v~~~A~~~L~~l~~~~~~ 151 (528)
T 4b8j_A 75 SLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTR---EDFPQLQFEAAWALTNIASGTSE 151 (528)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTC---TTCHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCC---CCCHHHHHHHHHHHHHHhCCCHH
Confidence 3555555544544 34566666666 3332 334445566788999988864 22355677889999999999999
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHh-cCCCCCccCceee
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLA-GVRCQETCDPLCM 168 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll-~~~d~k~~~~~~M 168 (497)
+...++..+++..+..+|... +..+.+.++..|+|++..+...+..+-..-.-..+..++ ..++..+....+.
T Consensus 152 ~~~~~~~~g~i~~L~~lL~~~------~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~ 225 (528)
T 4b8j_A 152 NTKVVIDHGAVPIFVKLLGSS------SDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATW 225 (528)
T ss_dssp HHHHHHHTTHHHHHHHHTTCS------CHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHH
T ss_pred HHHHHHhCCcHHHHHHHhcCC------CHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHH
Confidence 999999999999999988763 235677999999999999888888887654333355555 5666677777788
Q ss_pred eehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcch---hHHHHHH----------HHhHhcCcHHHHHHhhhhcC
Q 010918 169 VIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKED---WFKFLVS----------RTCVEEIHFPQLFFKLSQVG 235 (497)
Q Consensus 169 Viytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e---wl~lli~----------~~~le~~~l~~ly~~ls~~~ 235 (497)
.|.+++.+.+....... ...++.++.++ . +.+.+ ..-+.+. +.+++.+-++.+...|...
T Consensus 226 ~L~~L~~~~~~~~~~~~-~~~l~~L~~lL----~-~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~- 298 (528)
T 4b8j_A 226 TLSNFCRGKPQPSFEQT-RPALPALARLI----H-SNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHP- 298 (528)
T ss_dssp HHHHHHCSSSCCCHHHH-TTHHHHHHHHT----T-CCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCS-
T ss_pred HHHHHHcCCCCCcHHHH-HHHHHHHHHHH----C-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCC-
Confidence 88888854322222111 22333333222 1 12222 1111221 1233444445555544311
Q ss_pred CCcccCCCCCCCCCCChhHhHHHHHHHHHhhccccc--cccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHH
Q 010918 236 ASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEE--IIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVL 313 (497)
Q Consensus 236 ~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~d--i~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L 313 (497)
...-|..-+..|..+....+.. ..+..+....+...+... . . .++-
T Consensus 299 --------------~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~---------------~-~--~~v~ 346 (528)
T 4b8j_A 299 --------------SPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQN---------------L-K--KSIK 346 (528)
T ss_dssp --------------CHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSC---------------C-C--HHHH
T ss_pred --------------ChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCC---------------C-c--HHHH
Confidence 1233444444444444321100 000111122222222110 0 0 1122
Q ss_pred HhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchh
Q 010918 314 GYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFR 393 (497)
Q Consensus 314 ~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k 393 (497)
..+...|..++.. . ++....+...|++..++.+|..- -...|
T Consensus 347 ~~A~~~L~nl~~~------~----~~~~~~~~~~~~i~~L~~lL~~~----------------------------~~~v~ 388 (528)
T 4b8j_A 347 KEACWTISNITAG------N----KDQIQAVINAGIIGPLVNLLQTA----------------------------EFDIK 388 (528)
T ss_dssp HHHHHHHHHHHTS------C----HHHHHHHHHTTCHHHHHHHHHHS----------------------------CHHHH
T ss_pred HHHHHHHHHHHCC------C----HHHHHHHHHCCCHHHHHHHHhcC----------------------------CHHHH
Confidence 3456677777741 1 12456777889999999888631 12578
Q ss_pred HHHHHHHHhhccC-ChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChH
Q 010918 394 RDLVAVIGNCAYR-RKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAE 453 (497)
Q Consensus 394 ~~lvrli~nl~~~-~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~ 453 (497)
...+..|+|++.. +++....+.+.|+++.+++.. +..+|.++++++.++.|++...+.
T Consensus 389 ~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL--~~~d~~v~~~al~~L~~l~~~~~~ 447 (528)
T 4b8j_A 389 KEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLL--ICPDIRIVTVCLEGLENILKVGET 447 (528)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGG--GCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999987 788888999999999999874 457899999999999999987665
No 8
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.81 E-value=4.9e-07 Score=101.39 Aligned_cols=348 Identities=14% Similarity=0.117 Sum_probs=204.4
Q ss_pred cCchHHHHHHHHHhcccccCCcccc-cccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHH
Q 010918 25 SSSLKDALEILIESSKTTVGRSDLA-SKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIV 103 (497)
Q Consensus 25 ~~~~~~~l~~L~~~~k~~~~R~~~a-~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~ 103 (497)
..--+.+++.|..+++...+|..+. ...+++.+.++|++. .....-..++++|+|++. ...|...|.+.+++..+
T Consensus 164 ~~vr~~A~~~L~~L~~~~~~~~~i~~~~~~i~~Lv~~L~~~---~d~~vr~~Aa~aL~~Ls~-~~~~~~~i~~~g~I~~L 239 (780)
T 2z6g_A 164 QVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT---NDVETARCTSGTLHNLSH-HREGLLAIFKSGGIPAL 239 (780)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHTTCHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHhCCChhHHHHHhccChHHHHHHHHcCC---CCHHHHHHHHHHHHHHhC-CchhHHHHHHcCCHHHH
Confidence 3346788899999998877666444 235777777777642 245566778999999554 57888899999999999
Q ss_pred HHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhh-hchhHHHHHhcCCCCCccCceeeeehhhccCCchhhH
Q 010918 104 LRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQ-FFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFK 182 (497)
Q Consensus 104 ~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~-~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~ 182 (497)
..+|+.. +..+.+.++..|+|++..++..+..+-.. ..|. +..++..++.++....+..+.+...++.+-..
T Consensus 240 v~lL~~~------~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~-Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~ 312 (780)
T 2z6g_A 240 VNMLGSP------VDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQK-MVALLNKTNVKFLAITTDCLQILAYGNQESKL 312 (780)
T ss_dssp HHHTTCS------CHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHH-HHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHcCC------CHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHH-HHHHHhcCCHHHHHHHHHHHHHHhcCChHHHH
Confidence 9988764 24577899999999999999988888754 4454 56667666555544444455555444444444
Q ss_pred hhhcccchHHHHHHHHHHhhcCCcch--hHHH-HHH---------HHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCCC
Q 010918 183 ELCGDKGLAIMAEIVCTAASVGFKED--WFKF-LVS---------RTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGTF 250 (497)
Q Consensus 183 eL~~~~~i~i~~e~v~~a~~~~~d~e--wl~l-li~---------~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~~ 250 (497)
.+....++..++.+++. ...+. |.-. ++. ..+++.+-++.+...+.. ..
T Consensus 313 ~i~~~~~i~~Lv~lL~~----~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~---------------~~ 373 (780)
T 2z6g_A 313 IILASGGPQALVNIMRT----YTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTD---------------PS 373 (780)
T ss_dssp HHHTTTHHHHHHHHHTT----CCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTC---------------SC
T ss_pred HHHHcCCHHHHHHHHhc----CCHHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcC---------------Cc
Confidence 44444556655554432 11111 2111 111 111222222222222210 00
Q ss_pred ChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCC
Q 010918 251 SSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPA 330 (497)
Q Consensus 251 ~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~ 330 (497)
..-+..-+..+.......+..... ......+...+ +. . ..++...+...|..|+...
T Consensus 374 ~~~~~~a~~~L~~L~~~~~~~~~~-~~~i~~Lv~lL-----------~~------~--d~~vr~~A~~aL~~L~~~~--- 430 (780)
T 2z6g_A 374 QRLVQNCLWTLRNLSDAATKQEGM-EGLLGTLVQLL-----------GS------D--DINVVTCAAGILSNLTCNN--- 430 (780)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCSCC-HHHHHHHHHHT-----------TC------S--CHHHHHHHHHHHHHHTSSC---
T ss_pred hHHHHHHHHHHHHHhccchhhhhh-hhHHHHHHHHH-----------cC------C--CHHHHHHHHHHHHHHHhCC---
Confidence 111212222222222211110000 11111111111 00 0 0122234566666666311
Q ss_pred CCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChh-
Q 010918 331 GSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKH- 409 (497)
Q Consensus 331 s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~- 409 (497)
++....+...|.+..++.+|..-. .....+...++.|+|++..++.
T Consensus 431 -------~~~~~~i~~~g~i~~Lv~lL~~~~--------------------------~~~~v~~~Al~aL~nL~~~~~~~ 477 (780)
T 2z6g_A 431 -------YKNKMMVCQVGGIEALVRTVLRAG--------------------------DREDITEPAICALRHLTSRHQDA 477 (780)
T ss_dssp -------HHHHHHHHTTTHHHHHHHHHHHHT--------------------------TCHHHHHHHHHHHHHTTSSSTTH
T ss_pred -------HHHHHHHHHCCCHHHHHHHHHccC--------------------------CHHHHHHHHHHHHHHHHhcCchH
Confidence 123556667888999988886311 0125788889999999998776
Q ss_pred --hHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHHHHHh
Q 010918 410 --IQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQKVVAD 460 (497)
Q Consensus 410 --~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~~ 460 (497)
.|..|++.+|++.+++...-+ +.|.+|+-|.++|+||+. ++++|..+.+
T Consensus 478 ~~~~~~v~~~~~l~~L~~lL~~~-~~~~v~~~A~~aL~nLa~-~~~~~~~i~~ 528 (780)
T 2z6g_A 478 EMAQNAVRLHYGLPVVVKLLHPP-SHWPLIKATVGLIRNLAL-CPANHAPLRE 528 (780)
T ss_dssp HHHHHHHHHTTCHHHHHHTTSTT-CCHHHHHHHHHHHHHHHS-SHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHhcCC-ChHHHHHHHHHHHHHHhc-CHHHHHHHHH
Confidence 578999999999999887643 456899999999999997 5667765554
No 9
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.80 E-value=1.5e-07 Score=88.77 Aligned_cols=243 Identities=16% Similarity=0.179 Sum_probs=164.8
Q ss_pred ccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHH
Q 010918 49 ASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVL 128 (497)
Q Consensus 49 a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~L 128 (497)
..+..|+.+...|++- ..+....+.++|||+......+...+++.+++..+.+++.... ..+.+.++..|
T Consensus 9 ~~~~~~~~~~~~L~s~----~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~------~~v~~~a~~~L 78 (252)
T 4db8_A 9 HHGSELPQMTQQLNSD----DMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPN------EQILQEALWAL 78 (252)
T ss_dssp CTTCSHHHHHHHHHSS----CSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSC------HHHHHHHHHHH
T ss_pred cccchHHHHHHHHcCC----CHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCC------HHHHHHHHHHH
Confidence 4667789999999853 2345567788888877778888889999999999999887643 45677999999
Q ss_pred HHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcch
Q 010918 129 ANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKED 208 (497)
Q Consensus 129 gNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e 208 (497)
+|++.++.+.+..+...-.-..+..+++.++..+....+..|.++..+...+...
T Consensus 79 ~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~------------------------- 133 (252)
T 4db8_A 79 SNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA------------------------- 133 (252)
T ss_dssp HHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH-------------------------
T ss_pred HHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHH-------------------------
Confidence 9999999999988887744444666666555555444444444444221111111
Q ss_pred hHHHHHHHHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHh
Q 010918 209 WFKFLVSRTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTK 288 (497)
Q Consensus 209 wl~lli~~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~ 288 (497)
+++.+-++.+...|. +.
T Consensus 134 ---------~~~~~~i~~L~~lL~----------------------------------~~-------------------- 150 (252)
T 4db8_A 134 ---------VIDAGALPALVQLLS----------------------------------SP-------------------- 150 (252)
T ss_dssp ---------HHHTTHHHHHHHGGG----------------------------------CS--------------------
T ss_pred ---------HHHCCCHHHHHHHHh----------------------------------CC--------------------
Confidence 111122222222221 00
Q ss_pred hhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhh
Q 010918 289 SIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRK 368 (497)
Q Consensus 289 ~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k 368 (497)
. .++-..++..|..++... ++....+...|.+..++.+|+.
T Consensus 151 ------------------~--~~v~~~a~~~L~~l~~~~----------~~~~~~~~~~~~i~~L~~ll~~--------- 191 (252)
T 4db8_A 151 ------------------N--EQILQEALWALSNIASGG----------NEQIQAVIDAGALPALVQLLSS--------- 191 (252)
T ss_dssp ------------------C--HHHHHHHHHHHHHHTTSC----------HHHHHHHHHTTCHHHHHHGGGC---------
T ss_pred ------------------C--HHHHHHHHHHHHHHHcCC----------hHHHHHHHHCCCHHHHHHHHCC---------
Confidence 0 011123455666666311 1234566778999999888862
Q ss_pred hhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhh
Q 010918 369 AMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLL 448 (497)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~ 448 (497)
+-...+...+..++|++..++.....+.+.|+++.++.... +.+|.+|+.|.+|+.||+
T Consensus 192 -------------------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~--~~~~~v~~~A~~~L~~l~ 250 (252)
T 4db8_A 192 -------------------PNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQS--HENEKIQKEAQEALEKLQ 250 (252)
T ss_dssp -------------------SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTT--CSSSHHHHTHHHHHHTTC
T ss_pred -------------------CCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHh
Confidence 11267888999999999999999999999999999998764 568999999999999997
Q ss_pred c
Q 010918 449 E 449 (497)
Q Consensus 449 e 449 (497)
.
T Consensus 251 ~ 251 (252)
T 4db8_A 251 S 251 (252)
T ss_dssp -
T ss_pred c
Confidence 4
No 10
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.75 E-value=7.9e-07 Score=94.40 Aligned_cols=293 Identities=13% Similarity=0.164 Sum_probs=185.8
Q ss_pred hhhhhhccccCchHHHHHHHHHh----cccccC-CcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchh
Q 010918 16 LQPLLTTSNSSSLKDALEILIES----SKTTVG-RSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITN 90 (497)
Q Consensus 16 ~~~~~~~~~~~~~~~~l~~L~~~----~k~~~~-R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~N 90 (497)
++.+...-+|.+.+.-+++..+. |++..- +..+-.-.+.|.+.++|++ ...-.+-.++.++|.|+|.+.+.|
T Consensus 59 i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~---~~~~~lq~~Aa~aL~nias~~~e~ 135 (510)
T 3ul1_B 59 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGK---TDCSPIQFESAWALTNIASGTSEQ 135 (510)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTC---TTCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCC---CCCHHHHHHHHHHHHHHhcCCHHH
Confidence 45566666788877666665443 333210 1112233457778888864 233445567889999999999999
Q ss_pred hhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeee
Q 010918 91 QKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVI 170 (497)
Q Consensus 91 Q~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MVi 170 (497)
...+++.|.+..+.++|+++. ..+.+.+...|+|++..++..++.+-..-....+..++..++.+.... -++
T Consensus 136 ~~~vv~~GaIp~Lv~lL~s~~------~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~~~~~~--~~~ 207 (510)
T 3ul1_B 136 TKAVVDGGAIPAFISLLASPH------AHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLAC--GYL 207 (510)
T ss_dssp HHHHHHTTHHHHHHHHTTCSC------HHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCH--HHH
T ss_pred HHHHHHCCCHHHHHHHHcCCC------HHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccchhhhH--HHH
Confidence 999999999999999987633 457779999999999999999999988877777777776554332110 000
Q ss_pred hhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcchhHHHHHHHHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCCC
Q 010918 171 YTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKEDWFKFLVSRTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGTF 250 (497)
Q Consensus 171 ytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~ewl~lli~~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~~ 250 (497)
.++. +-+-.-+....+..++.. +
T Consensus 208 ~~a~-------------------~~L~nl~~~~~~~~~~~~--~------------------------------------ 230 (510)
T 3ul1_B 208 RNLT-------------------WTLSNLCRNKNPAPPLDA--V------------------------------------ 230 (510)
T ss_dssp HHHH-------------------HHHHHHHCCCSSCCCHHH--H------------------------------------
T ss_pred HHHH-------------------HHHHHHhhcccchhHHHH--H------------------------------------
Confidence 0000 000000000000000000 0
Q ss_pred ChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCC
Q 010918 251 SSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPA 330 (497)
Q Consensus 251 ~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~ 330 (497)
..++..+...+.+.. .++...+...|+.|+..
T Consensus 231 ----~~~lp~L~~LL~~~~----------------------------------------~~v~~~A~~aL~~L~~~---- 262 (510)
T 3ul1_B 231 ----EQILPTLVRLLHHND----------------------------------------PEVLADSCWAISYLTDG---- 262 (510)
T ss_dssp ----HHHHHHHHHHTTCSC----------------------------------------HHHHHHHHHHHHHHTSS----
T ss_pred ----HhHHHHHHHHHhcCC----------------------------------------HHHHHHHHHHHHHHhhc----
Confidence 001111111111100 12222345556666531
Q ss_pred CCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhh
Q 010918 331 GSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHI 410 (497)
Q Consensus 331 s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~ 410 (497)
. ++....+...|++..++.+|+. +-...+...++.++|++..+...
T Consensus 263 --~----~~~~~~i~~~g~i~~Lv~lL~~----------------------------~~~~v~~~al~aL~nl~~~~~~~ 308 (510)
T 3ul1_B 263 --P----NERIEMVVKKGVVPQLVKLLGA----------------------------TELPIVTPALRAIGNIVTGTDEQ 308 (510)
T ss_dssp --C----HHHHHHHHTTTCHHHHHHHHTC----------------------------SCHHHHHHHHHHHHHHTTSCHHH
T ss_pred --h----hhhHHHHHhcccchhhhhhhcC----------------------------CChhhhhHHHHHHHHhhcCCHHH
Confidence 1 1234556678999999998862 11256778899999999999999
Q ss_pred HHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHHHHHh
Q 010918 411 QDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQKVVAD 460 (497)
Q Consensus 411 Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~~ 460 (497)
...+.+.|+++.+...- ...++.+|+.|.|++.|++.+++++.+.+.+
T Consensus 309 ~~~i~~~g~l~~L~~LL--~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~ 356 (510)
T 3ul1_B 309 TQKVIDAGALAVFPSLL--TNPKTNIQKEATWTMSNITAGRQDQIQQVVN 356 (510)
T ss_dssp HHHHHHTTGGGGCC-CT--TCSSHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHhhccchHHHHHHh--cCCCHHHHHHHHHHHHHHHcCcHHHHHHHHh
Confidence 99999999999887754 4678899999999999999999998887754
No 11
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.70 E-value=1.3e-07 Score=100.54 Aligned_cols=278 Identities=15% Similarity=0.186 Sum_probs=182.6
Q ss_pred HHHHHHHHHhc-ccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHh
Q 010918 29 KDALEILIESS-KTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVL 107 (497)
Q Consensus 29 ~~~l~~L~~~~-k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll 107 (497)
.+|.++|++++ -+...+..+......|.+.++|++ ++...-..+..+|+|+|..++.++..+++.|++..+..++
T Consensus 119 ~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s----~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL 194 (510)
T 3ul1_B 119 FESAWALTNIASGTSEQTKAVVDGGAIPAFISLLAS----PHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALL 194 (510)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC----SCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcC----CCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHH
Confidence 58999999985 455566556666677888888863 4556777889999999999999999999999999999999
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcc
Q 010918 108 RSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGD 187 (497)
Q Consensus 108 ~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~ 187 (497)
...... .....+.|.+.-.|+|++.+...........-.-..+..++..++.++....|..|.++.+++.++.+.+.
T Consensus 195 ~~~~~~-~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~-- 271 (510)
T 3ul1_B 195 AVPDLS-TLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVV-- 271 (510)
T ss_dssp CSSCGG-GSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHH--
T ss_pred Hhccch-hhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHH--
Confidence 775432 12346789999999999998877766655443333355566666666555555555555433322222211
Q ss_pred cchHHHHHHHHHHhhcCCcchhHHHHHHHHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhc
Q 010918 188 KGLAIMAEIVCTAASVGFKEDWFKFLVSRTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNE 267 (497)
Q Consensus 188 ~~i~i~~e~v~~a~~~~~d~ewl~lli~~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e 267 (497)
+.+-++.+...|...
T Consensus 272 --------------------------------~~g~i~~Lv~lL~~~--------------------------------- 286 (510)
T 3ul1_B 272 --------------------------------KKGVVPQLVKLLGAT--------------------------------- 286 (510)
T ss_dssp --------------------------------TTTCHHHHHHHHTCS---------------------------------
T ss_pred --------------------------------hcccchhhhhhhcCC---------------------------------
Confidence 222222222222100
Q ss_pred cccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhc
Q 010918 268 RIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSH 347 (497)
Q Consensus 268 ~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~ 347 (497)
. ..+...++..+..++... . +....+...
T Consensus 287 -~----------------------------------------~~v~~~al~aL~nl~~~~-----~-----~~~~~i~~~ 315 (510)
T 3ul1_B 287 -E----------------------------------------LPIVTPALRAIGNIVTGT-----D-----EQTQKVIDA 315 (510)
T ss_dssp -C----------------------------------------HHHHHHHHHHHHHHTTSC-----H-----HHHHHHHHT
T ss_pred -C----------------------------------------hhhhhHHHHHHHHhhcCC-----H-----HHHHHHhhc
Confidence 0 001112344555555311 0 123455566
Q ss_pred ccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhc
Q 010918 348 GLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQC 427 (497)
Q Consensus 348 gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c 427 (497)
|.+..++.+|+. +-..+|......|+|++..++.....+.+.|++|.++...
T Consensus 316 g~l~~L~~LL~~----------------------------~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL 367 (510)
T 3ul1_B 316 GALAVFPSLLTN----------------------------PKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVL 367 (510)
T ss_dssp TGGGGCC-CTTC----------------------------SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHH
T ss_pred cchHHHHHHhcC----------------------------CCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHH
Confidence 665555444431 2236788899999999999999999999999999998876
Q ss_pred ccCCCCCcchhhhHHhHhhhhcC-ChHHHHHHH
Q 010918 428 VTDEDNPFSREWGIWCVRNLLEG-NAENQKVVA 459 (497)
Q Consensus 428 ~iD~~nP~~rEwai~~iRnL~e~-n~~nQ~~i~ 459 (497)
. ..++.+|..|.|||+|++.+ ++++...+.
T Consensus 368 ~--~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~ 398 (510)
T 3ul1_B 368 S--KADFKTQKEAAWAITNYTSGGTVEQIVYLV 398 (510)
T ss_dssp H--SSCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred c--CCCHHHHHHHHHHHHHHHccCCHHHHHHHH
Confidence 4 45789999999999999985 555544443
No 12
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.69 E-value=2.6e-06 Score=88.50 Aligned_cols=121 Identities=12% Similarity=0.158 Sum_probs=90.5
Q ss_pred hhhhhhhhccc----cCchHHHHHHHHHhcccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch
Q 010918 14 DVLQPLLTTSN----SSSLKDALEILIESSKTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT 89 (497)
Q Consensus 14 ~~~~~~~~~~~----~~~~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~ 89 (497)
+.+.+|...-. ...-+.+.+.|..+++...+|..+......+.+.++|++ ........+.+.|+|+|.....
T Consensus 59 ~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~----~~~~v~~~a~~~L~~l~~~~~~ 134 (529)
T 1jdh_A 59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGS----PVDSVLFYAITTLHNLLLHQEG 134 (529)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTC----SCHHHHHHHHHHHHHHHHHCTT
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcC----CCHHHHHHHHHHHHHHhcCCcc
Confidence 45555555422 223567889999999999999988877888888888864 3356678889999999999888
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHh
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWC 144 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~ 144 (497)
++..+++.+++..+..++.... ......+...|+|++.+|++.+..+-.
T Consensus 135 ~~~~i~~~g~i~~L~~ll~~~~------~~~~~~~~~~L~~la~~~~~~~~~i~~ 183 (529)
T 1jdh_A 135 AKMAVRLAGGLQKMVALLNKTN------VKFLAITTDCLQILAYGNQESKLIILA 183 (529)
T ss_dssp HHHHHHHHTHHHHHHHGGGCCC------HHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHcCCHHHHHHHHhcCC------HHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999998887632 234456667777777777666655544
No 13
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.67 E-value=1.4e-06 Score=88.47 Aligned_cols=353 Identities=13% Similarity=0.070 Sum_probs=204.8
Q ss_pred hhhhhhccccCc---hHHHHHHHHHh-c--ccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch
Q 010918 16 LQPLLTTSNSSS---LKDALEILIES-S--KTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT 89 (497)
Q Consensus 16 ~~~~~~~~~~~~---~~~~l~~L~~~-~--k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~ 89 (497)
++.|+..-+|.+ -+.+++.|..+ + +.+..+..+....+++.+.+.|++ +.....-....++|+|+|.+.+.
T Consensus 22 l~~l~~~l~s~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~---~~~~~v~~~a~~~L~~l~~~~~~ 98 (450)
T 2jdq_A 22 TSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKR---KENCTLQFESAWVLTNIASGNSL 98 (450)
T ss_dssp CHHHHHHHHSSCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTC---TTCHHHHHHHHHHHHHHHSSCHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCC---CCCHHHHHHHHHHHHHHhcCCHH
Confidence 555555555554 44566666554 2 222223322222678888888864 22455667889999999999999
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcC-CCCCccCceee
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGV-RCQETCDPLCM 168 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~-~d~k~~~~~~M 168 (497)
++..+++.+.+..+.+++.+. +..+-..++..|+|++..+...++.+-..-.-..+..++.. ++.++....+.
T Consensus 99 ~~~~~~~~~~i~~L~~lL~~~------~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~ 172 (450)
T 2jdq_A 99 QTRIVIQAGAVPIFIELLSSE------FEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVW 172 (450)
T ss_dssp HHHHHHHTTHHHHHHHHTTCS------CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHcCC------CHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHH
Confidence 999999888889888888753 34566789999999999998888888765544556667764 55667777788
Q ss_pred eehhhccCC-chhhHhhhcccchHHHHHHHHHHhhcCCcch---hHHHHHHHH----------hHhcCcHHHHHHhhhhc
Q 010918 169 VIYTCCDGS-SGLFKELCGDKGLAIMAEIVCTAASVGFKED---WFKFLVSRT----------CVEEIHFPQLFFKLSQV 234 (497)
Q Consensus 169 Viytc~~~s-~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e---wl~lli~~~----------~le~~~l~~ly~~ls~~ 234 (497)
.+.+++.+. +..-..+. ...++.++.++. . .+.+ ...|.+... +.+.+-++.+...|...
T Consensus 173 ~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~----~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~ 246 (450)
T 2jdq_A 173 ALSNLCRGKSPPPEFAKV-SPCLNVLSWLLF----V-SDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHN 246 (450)
T ss_dssp HHHHHHCCSSSCCCGGGT-GGGHHHHHHHTT----C-CCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCS
T ss_pred HHHHHhCCCCCCCCHHHH-HHHHHHHHHHHc----c-CCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCC
Confidence 888888543 22222222 223443333321 1 2222 122222211 22233344444443210
Q ss_pred CCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHH
Q 010918 235 GASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLG 314 (497)
Q Consensus 235 ~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~ 314 (497)
-..-|..-+..+.......+.. ...+. + .+.+.....- +. ... ..+-.
T Consensus 247 ---------------~~~v~~~a~~~L~~l~~~~~~~-------~~~~~----~-~~~l~~L~~l-l~--~~~--~~vr~ 294 (450)
T 2jdq_A 247 ---------------DYKVVSPALRAVGNIVTGDDIQ-------TQVIL----N-CSALQSLLHL-LS--SPK--ESIKK 294 (450)
T ss_dssp ---------------CHHHHHHHHHHHHHHTTSCHHH-------HHHHH----T-TTHHHHHHHH-TT--CSS--HHHHH
T ss_pred ---------------chhHHHHHHHHHHHHhhCChHH-------HHHHH----H-CccHHHHHHH-Hc--CCC--HHHHH
Confidence 1222333344444333221100 00000 0 0111000000 00 001 12222
Q ss_pred hHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhH
Q 010918 315 YSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRR 394 (497)
Q Consensus 315 ~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~ 394 (497)
.++..|..++.. . ++....+.+.|++..++.+|+. +-+..|.
T Consensus 295 ~a~~~L~~l~~~------~----~~~~~~~~~~~~l~~L~~~l~~----------------------------~~~~v~~ 336 (450)
T 2jdq_A 295 EACWTISNITAG------N----RAQIQTVIDANIFPALISILQT----------------------------AEFRTRK 336 (450)
T ss_dssp HHHHHHHHHTTS------C----HHHHHHHHHTTHHHHHHHHHHH----------------------------SCHHHHH
T ss_pred HHHHHHHHHHcC------C----HHHHHHHHHCCCHHHHHHHHhc----------------------------CCHHHHH
Confidence 456677777641 1 1234455667888888888752 0126788
Q ss_pred HHHHHHHhhccC-ChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHH
Q 010918 395 DLVAVIGNCAYR-RKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQ 455 (497)
Q Consensus 395 ~lvrli~nl~~~-~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ 455 (497)
..+..|+|++.. +++....+.+.++++.+++... +.+|.+|+.|++|+.|+++..+..+
T Consensus 337 ~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~--~~~~~v~~~a~~aL~~l~~~~~~~~ 396 (450)
T 2jdq_A 337 EAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLT--VMDSKIVQVALNGLENILRLGEQEA 396 (450)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGG--SSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhc--CCCHHHHHHHHHHHHHHHHhchhhh
Confidence 889999999976 6666667778899999999765 4589999999999999999766543
No 14
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.64 E-value=1.3e-06 Score=92.85 Aligned_cols=285 Identities=11% Similarity=0.088 Sum_probs=168.3
Q ss_pred CcHHHHHHHHHHHHhhc-cccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhh
Q 010918 68 SGCHYLLLSLKLLRNLC-AGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQF 146 (497)
Q Consensus 68 ~~~~~l~~clR~LRNlC-a~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~ 146 (497)
...+....+++.+|++- .+....=+.+++.|++..++++|.... ...+.+.+...|+|++.++..+...|=..-
T Consensus 88 ~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~-----~~~~q~~Aa~aL~nia~~~~~~~~~vv~~G 162 (529)
T 3tpo_A 88 NNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTD-----CSPIQFESAWALTNIASGTSEQTKAVVDGG 162 (529)
T ss_dssp SCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTT-----CHHHHHHHHHHHHHHHTSCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCCC-----CHHHHHHHHHHHHHHHcCCHHHHHHHHHCC
Confidence 34455677888888753 332222346788888888888886432 234666788899999999998877776664
Q ss_pred chhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcchhHHHHHHHHhHhcCcHHH
Q 010918 147 FPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKEDWFKFLVSRTCVEEIHFPQ 226 (497)
Q Consensus 147 fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~ewl~lli~~~~le~~~l~~ 226 (497)
.-..|..++..++..+....+..|.|+...+.+.-..+....++..++.++. ......
T Consensus 163 aip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~----~~~~~~------------------ 220 (529)
T 3tpo_A 163 AIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLA----VPDLST------------------ 220 (529)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTC----SSCGGG------------------
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHh----ccchhH------------------
Confidence 4344667888888887777777787777443333333323333333322221 100000
Q ss_pred HHHhhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccc-cccc-cCchhHHHHHHHHHhhhhhhhhhhcCCCCCC
Q 010918 227 LFFKLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERI-EEII-VPNDFALSVLGIFTKSIGLVDFYARGTPSLP 304 (497)
Q Consensus 227 ly~~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~-~di~-v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~ 304 (497)
....++..+...+..-. .+.+ .+.....-++..+.+.. ..
T Consensus 221 --------------------------~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL-------~~----- 262 (529)
T 3tpo_A 221 --------------------------LACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL-------HH----- 262 (529)
T ss_dssp --------------------------SCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHT-------TS-----
T ss_pred --------------------------hHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHh-------cC-----
Confidence 00011111110000000 0000 00000001111111110 00
Q ss_pred CCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCccccc
Q 010918 305 TSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSA 384 (497)
Q Consensus 305 t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~ 384 (497)
...++...+...|..++.. . ++....+...|++..++.+|+.
T Consensus 263 ---~~~~v~~~a~~aL~~l~~~------~----~~~~~~v~~~g~i~~Lv~lL~~------------------------- 304 (529)
T 3tpo_A 263 ---NDPEVLADSCWAISYLTDG------P----NERIEMVVKKGVVPQLVKLLGA------------------------- 304 (529)
T ss_dssp ---SCHHHHHHHHHHHHHHHSS------C----HHHHHHHHTTTCHHHHHHHHTC-------------------------
T ss_pred ---CcHHHHHHHHHHHHHhhhh------h----hhhHHHHHhccchHHHHHHhcC-------------------------
Confidence 0112223445556666631 1 1234566678999999998852
Q ss_pred ccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHHHHHh
Q 010918 385 KTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQKVVAD 460 (497)
Q Consensus 385 ~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~~ 460 (497)
+-...+...++.++|++..+......+.+.|+++.+.... ...+|.+|+.|.|++.|++.++++..+.+.+
T Consensus 305 ---~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL--~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~ 375 (529)
T 3tpo_A 305 ---TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLL--TNPKTNIQKEATWTMSNITAGRQDQIQQVVN 375 (529)
T ss_dssp ---SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHT--TCSSHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred ---CChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHH--cCCCHHHHHHHHHHHHHHhcccHHHHHHHHh
Confidence 1125677889999999999999999999999999988765 3678899999999999999999998877654
No 15
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.60 E-value=2.1e-06 Score=90.66 Aligned_cols=351 Identities=13% Similarity=0.080 Sum_probs=209.8
Q ss_pred hhhhhhhccccCc---hHHHHHHHHHhccc--ccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch
Q 010918 15 VLQPLLTTSNSSS---LKDALEILIESSKT--TVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT 89 (497)
Q Consensus 15 ~~~~~~~~~~~~~---~~~~l~~L~~~~k~--~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~ 89 (497)
.+..|+..-+|.+ -..+++.|..+... ...+..+....+++.+.++|++ +.....-..+.++|+|+|.+.+.
T Consensus 88 ~i~~lv~~L~s~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~---~~~~~v~~~A~~~L~~l~~~~~~ 164 (530)
T 1wa5_B 88 ELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRE---NQPEMLQLEAAWALTNIASGTSA 164 (530)
T ss_dssp CHHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTST---TSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCC---CCCHHHHHHHHHHHHHHhCCCHH
Confidence 3555555545544 34566777766432 2233334455778888888763 22456677889999999999999
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeee
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMV 169 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MV 169 (497)
+...++..+++..+..+|... +..+...++..|+|++..+...++.+-..-.-..+..++..++.++....+..
T Consensus 165 ~~~~~~~~g~i~~Lv~lL~~~------~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~ 238 (530)
T 1wa5_B 165 QTKVVVDADAVPLFIQLLYTG------SVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWT 238 (530)
T ss_dssp HHHHHHHTTCHHHHHHHHHHC------CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCC------CHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCHHHHHHHHHH
Confidence 999999999999999888753 24567799999999999988888877766555556667766777777777888
Q ss_pred ehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcch---hHHHHHHH----------HhHhcCcHHHHHHhhhhcCC
Q 010918 170 IYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKED---WFKFLVSR----------TCVEEIHFPQLFFKLSQVGA 236 (497)
Q Consensus 170 iytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e---wl~lli~~----------~~le~~~l~~ly~~ls~~~~ 236 (497)
|.+++.+.............++.++.++. +.+.+ ..-+.+.. .+++.+-++.+...|...
T Consensus 239 L~~L~~~~~~~~~~~~~~~~l~~L~~lL~-----~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~-- 311 (530)
T 1wa5_B 239 LSNLCRGKKPQPDWSVVSQALPTLAKLIY-----SMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHE-- 311 (530)
T ss_dssp HHHHHCCSSSCCCHHHHGGGHHHHHHHTT-----CCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCS--
T ss_pred HHHHhCCCCCCCcHHHHHhHHHHHHHHHc-----CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCC--
Confidence 88888543111111111223443333221 12222 11222221 223334445555544311
Q ss_pred CcccCCCCCCCCCCChhHhHHHHHHHHHhhcccccc--ccCchhHHHHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHH
Q 010918 237 SRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEEI--IVPNDFALSVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLG 314 (497)
Q Consensus 237 ~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di--~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~ 314 (497)
...-|..-+..+..+....+... -+..+....+.. .... .. ..+-.
T Consensus 312 -------------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~-----------lL~~------~~--~~vr~ 359 (530)
T 1wa5_B 312 -------------STLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRL-----------LLSS------PK--ENIKK 359 (530)
T ss_dssp -------------CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH-----------HTTC------SC--HHHHH
T ss_pred -------------ChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHH-----------HHcC------CC--HHHHH
Confidence 12234344444444432211000 000001111111 0111 11 12223
Q ss_pred hHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhH
Q 010918 315 YSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRR 394 (497)
Q Consensus 315 ~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~ 394 (497)
.++..|..++... ++....+.+.|++..++.+|+.- -+.+|.
T Consensus 360 ~A~~aL~~l~~~~----------~~~~~~~~~~~~l~~L~~lL~~~----------------------------~~~v~~ 401 (530)
T 1wa5_B 360 EACWTISNITAGN----------TEQIQAVIDANLIPPLVKLLEVA----------------------------EYKTKK 401 (530)
T ss_dssp HHHHHHHHHTTSC----------HHHHHHHHHTTCHHHHHHHHHHS----------------------------CHHHHH
T ss_pred HHHHHHHHHHcCC----------HHHHHHHHHCCCHHHHHHHHhcC----------------------------CHHHHH
Confidence 5667777777421 12345666789999998888530 126788
Q ss_pred HHHHHHHhhccC-Ch--hhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChH
Q 010918 395 DLVAVIGNCAYR-RK--HIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAE 453 (497)
Q Consensus 395 ~lvrli~nl~~~-~~--~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~ 453 (497)
..+..|+|++.. .+ +....+.+.|+++.+++... +.+|.++++|+.++.++++..+.
T Consensus 402 ~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~--~~~~~v~~~al~aL~~l~~~~~~ 461 (530)
T 1wa5_B 402 EACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLE--IADNRIIEVTLDALENILKMGEA 461 (530)
T ss_dssp HHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHh--CCCHHHHHHHHHHHHHHHHhhhh
Confidence 888999999875 34 66677778999999998865 45899999999999999987665
No 16
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.58 E-value=6.7e-06 Score=89.35 Aligned_cols=132 Identities=12% Similarity=0.157 Sum_probs=97.7
Q ss_pred hhhhhhhhcccc----CchHHHHHHHHHhcccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch
Q 010918 14 DVLQPLLTTSNS----SSLKDALEILIESSKTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT 89 (497)
Q Consensus 14 ~~~~~~~~~~~~----~~~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~ 89 (497)
..+.+|...-.+ ..-+.+..+|..+++...+|..+....+.+.+.++|++ ........+.+.|+|+|.....
T Consensus 56 ~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~----~~~~v~~~A~~aL~nL~~~~~~ 131 (644)
T 2z6h_A 56 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGS----PVDSVLFYAITTLHNLLLHQEG 131 (644)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTTC----SSHHHHHHHHHHHHHHHHHSTT
T ss_pred ChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHhC----CCHHHHHHHHHHHHHHHhCcch
Confidence 445555544332 23567888999999999999988877888888888864 3456778889999999999888
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHh
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLA 155 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll 155 (497)
++..+++.+++..+..+|.... ......++..|+|++.+|++.+..+-..-....+..++
T Consensus 132 ~~~~v~~~g~i~~Lv~lL~~~~------~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL 191 (644)
T 2z6h_A 132 AKMAVRLAGGLQKMVALLNKTN------VKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIM 191 (644)
T ss_dssp HHHHHHHTTHHHHHHHGGGCCC------HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred hHHHHHHCCChHHHHHHHCcCC------HHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHH
Confidence 9999999999999999887642 23555777888999888877776665544444444444
No 17
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.58 E-value=2.7e-06 Score=89.38 Aligned_cols=322 Identities=14% Similarity=0.082 Sum_probs=191.5
Q ss_pred hHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccc-hhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHH
Q 010918 54 LPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEI-TNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVS 132 (497)
Q Consensus 54 ~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~-~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia 132 (497)
++.+++.|.+ .....-..+.+.||++..+.. .+...++..+.+..+.++|.... +..+...++..|+|++
T Consensus 76 l~~lv~~L~s----~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~-----~~~v~~~A~~~L~~l~ 146 (528)
T 4b8j_A 76 LPAMIGGVYS----DDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRED-----FPQLQFEAAWALTNIA 146 (528)
T ss_dssp HHHHHHHHTS----SCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTT-----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC----CCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCC-----CHHHHHHHHHHHHHHh
Confidence 5666666642 234566778899999976665 67778888899999988886542 1346668999999999
Q ss_pred hcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcch---h
Q 010918 133 LAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKED---W 209 (497)
Q Consensus 133 ~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e---w 209 (497)
.++.+....+...-.-..|..++..++..+....+..|.+++..+++....+....++..++.++ ....+.+ .
T Consensus 147 ~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL----~~~~~~~v~~~ 222 (528)
T 4b8j_A 147 SGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQL----NEHTKLSMLRN 222 (528)
T ss_dssp TSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTC----CTTCCHHHHHH
T ss_pred CCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHH----hcCCCHHHHHH
Confidence 99999999988875555577788878888888888899998844433333333333444433222 1222222 2
Q ss_pred HHHHHHHHhHhc---------CcHHHHHHhhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccccccccCchhHH
Q 010918 210 FKFLVSRTCVEE---------IHFPQLFFKLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFAL 280 (497)
Q Consensus 210 l~lli~~~~le~---------~~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~ 280 (497)
.-|.+...+-.. +-++.+...+... -..-+..-+..+.......+..
T Consensus 223 a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~---------------~~~v~~~a~~aL~~l~~~~~~~--------- 278 (528)
T 4b8j_A 223 ATWTLSNFCRGKPQPSFEQTRPALPALARLIHSN---------------DEEVLTDACWALSYLSDGTNDK--------- 278 (528)
T ss_dssp HHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCC---------------CHHHHHHHHHHHHHHTSSCHHH---------
T ss_pred HHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCC---------------CHHHHHHHHHHHHHHHcCCHHH---------
Confidence 333333332221 1122233222100 0111222222222221110000
Q ss_pred HHHHHHHhhhhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhc
Q 010918 281 SVLGIFTKSIGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDL 360 (497)
Q Consensus 281 ~l~~~F~~~a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l 360 (497)
...+.+ .+.+..... -+.... .++...++..|..++... ++....+.+.|++..++.+|+.-
T Consensus 279 --~~~~~~-~g~v~~Lv~---lL~~~~--~~v~~~a~~~L~nl~~~~----------~~~~~~~~~~~~l~~L~~lL~~~ 340 (528)
T 4b8j_A 279 --IQAVIE-AGVCPRLVE---LLLHPS--PSVLIPALRTVGNIVTGD----------DAQTQCIIDHQALPCLLSLLTQN 340 (528)
T ss_dssp --HHHHHH-TTCHHHHHH---HTTCSC--HHHHHHHHHHHHHHTTSC----------HHHHHHHHTTTHHHHHHHHHHSC
T ss_pred --HHHHHH-cCHHHHHHH---HHcCCC--hhHHHHHHHHHHHHHcCC----------HHHHHHHHHhhhHHHHHHHHcCC
Confidence 000000 001100000 000111 123335677777777411 12355667789999998888621
Q ss_pred CCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhh
Q 010918 361 EPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWG 440 (497)
Q Consensus 361 ~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwa 440 (497)
.-..++...+..|+|++..++.....+.+.+++|.++.... ..+|.+|+.|
T Consensus 341 ---------------------------~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~--~~~~~v~~~a 391 (528)
T 4b8j_A 341 ---------------------------LKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQ--TAEFDIKKEA 391 (528)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHH--HSCHHHHHHH
T ss_pred ---------------------------CcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHh--cCCHHHHHHH
Confidence 02267888899999999999888888889999999998764 3489999999
Q ss_pred HHhHhhhhcC-ChHHHHHHH
Q 010918 441 IWCVRNLLEG-NAENQKVVA 459 (497)
Q Consensus 441 i~~iRnL~e~-n~~nQ~~i~ 459 (497)
.+|+.|++.+ ++++...+.
T Consensus 392 ~~aL~nl~~~~~~~~~~~l~ 411 (528)
T 4b8j_A 392 AWAISNATSGGSHDQIKYLV 411 (528)
T ss_dssp HHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHH
Confidence 9999999987 677766654
No 18
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.57 E-value=1.2e-05 Score=90.24 Aligned_cols=124 Identities=12% Similarity=0.122 Sum_probs=93.1
Q ss_pred hhhhhhhhcccc----CchHHHHHHHHHhcccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch
Q 010918 14 DVLQPLLTTSNS----SSLKDALEILIESSKTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT 89 (497)
Q Consensus 14 ~~~~~~~~~~~~----~~~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~ 89 (497)
+.+.+|...-.+ ..-+.+.+.|..+++...+|..+....+.+.+..+|++ ..-.....++.+|+|+|.....
T Consensus 192 ~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~----~~~~v~~~A~~aL~nLa~~~~~ 267 (780)
T 2z6g_A 192 QMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGS----PVDSVLFHAITTLHNLLLHQEG 267 (780)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTC----SCHHHHHHHHHHHHHHHHHSTT
T ss_pred ChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcC----CCHHHHHHHHHHHHHHhCCChh
Confidence 566666554332 23567889999999998888877777888888888864 2456778899999999999889
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhc
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFF 147 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~f 147 (497)
++..+++.+.+..+..++.+.. ..+.+.++..|+|++.+|++.+..+...-.
T Consensus 268 ~~~~v~~~g~v~~Lv~lL~~~~------~~v~~~a~~aL~~La~~~~e~~~~i~~~~~ 319 (780)
T 2z6g_A 268 AKMAVRLAGGLQKMVALLNKTN------VKFLAITTDCLQILAYGNQESKLIILASGG 319 (780)
T ss_dssp HHHHHHHTTHHHHHHHGGGCCC------HHHHHHHHHHHHHHHTTCHHHHHHHHTTTH
T ss_pred hHHHHHHcCCHHHHHHHHhcCC------HHHHHHHHHHHHHHhcCChHHHHHHHHcCC
Confidence 9999999999999999887632 235567777788888777766666554433
No 19
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.41 E-value=1.6e-05 Score=80.58 Aligned_cols=318 Identities=12% Similarity=0.073 Sum_probs=173.7
Q ss_pred hHHHHHhhhcCCCCCcHHHHHHHHHHHHhhcc--ccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHH
Q 010918 54 LPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCA--GEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANV 131 (497)
Q Consensus 54 ~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa--~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNi 131 (497)
++.+.+.|++ .....-..+++.||+++. ..+..+..+...+.+..+.+++.... +..+.+.++..|+|+
T Consensus 22 l~~l~~~l~s----~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~~~-----~~~v~~~a~~~L~~l 92 (450)
T 2jdq_A 22 TSDMIEMIFS----KSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKE-----NCTLQFESAWVLTNI 92 (450)
T ss_dssp CHHHHHHHHS----SCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTT-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC----CCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCCCC-----CHHHHHHHHHHHHHH
Confidence 5666666653 233455677888888754 33444444433377788888886531 245677999999999
Q ss_pred HhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcch---
Q 010918 132 SLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKED--- 208 (497)
Q Consensus 132 a~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e--- 208 (497)
+.++.+.++.+...-.-..+..+++.++..+....+..+.++...+.+....+.....++.++.++. ..++.+
T Consensus 93 ~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~----~~~~~~v~~ 168 (450)
T 2jdq_A 93 ASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFS----KQNRLTMTR 168 (450)
T ss_dssp HSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTT----SCCCHHHHH
T ss_pred hcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhc----CCCCHHHHH
Confidence 9998777776654433444666777777777777788888887544333333333344554433332 112222
Q ss_pred hHHHHHHHHhHhc-CcHHHHHHhhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHH
Q 010918 209 WFKFLVSRTCVEE-IHFPQLFFKLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFT 287 (497)
Q Consensus 209 wl~lli~~~~le~-~~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~ 287 (497)
..-|.+...+-.. +... .... .-++..+...+.+...++ ...+.|.+..+.
T Consensus 169 ~a~~~L~~l~~~~~~~~~----------------------~~~~---~~~l~~L~~~l~~~~~~v---~~~a~~~L~~l~ 220 (450)
T 2jdq_A 169 NAVWALSNLCRGKSPPPE----------------------FAKV---SPCLNVLSWLLFVSDTDV---LADACWALSYLS 220 (450)
T ss_dssp HHHHHHHHHHCCSSSCCC----------------------GGGT---GGGHHHHHHHTTCCCHHH---HHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCCC----------------------HHHH---HHHHHHHHHHHccCCHHH---HHHHHHHHHHHH
Confidence 2222222222111 0000 0000 112222222222111100 011112111111
Q ss_pred hh----------hhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHh
Q 010918 288 KS----------IGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLL 357 (497)
Q Consensus 288 ~~----------a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LL 357 (497)
.. .+.+.....- +. ... .++...++..|..++... ++..+.+...|++..++.+|
T Consensus 221 ~~~~~~~~~~~~~~~i~~L~~l-l~--~~~--~~v~~~a~~~L~~l~~~~----------~~~~~~~~~~~~l~~L~~ll 285 (450)
T 2jdq_A 221 DGPNDKIQAVIDAGVCRRLVEL-LM--HND--YKVVSPALRAVGNIVTGD----------DIQTQVILNCSALQSLLHLL 285 (450)
T ss_dssp SSSHHHHHHHHHTTTHHHHHHH-TT--CSC--HHHHHHHHHHHHHHTTSC----------HHHHHHHHTTTHHHHHHHHT
T ss_pred CCCcHHHHHHHHcCcHHHHHHH-HC--CCc--hhHHHHHHHHHHHHhhCC----------hHHHHHHHHCccHHHHHHHH
Confidence 10 0011000000 00 001 122234566666666411 12344566678888777776
Q ss_pred hhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcch
Q 010918 358 RDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSR 437 (497)
Q Consensus 358 r~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~r 437 (497)
+. +-...|...++.|+|++..++.....+.+.+++|.+++... +.+|.+|
T Consensus 286 ~~----------------------------~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~--~~~~~v~ 335 (450)
T 2jdq_A 286 SS----------------------------PKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQ--TAEFRTR 335 (450)
T ss_dssp TC----------------------------SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHH--HSCHHHH
T ss_pred cC----------------------------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHh--cCCHHHH
Confidence 42 12367888999999999999888888888899999988755 4689999
Q ss_pred hhhHHhHhhhhcC-ChHHHHH
Q 010918 438 EWGIWCVRNLLEG-NAENQKV 457 (497)
Q Consensus 438 Ewai~~iRnL~e~-n~~nQ~~ 457 (497)
+.|.+++.|++.+ +++..+.
T Consensus 336 ~~a~~~L~~l~~~~~~~~~~~ 356 (450)
T 2jdq_A 336 KEAAWAITNATSGGSAEQIKY 356 (450)
T ss_dssp HHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHH
Confidence 9999999999987 5655443
No 20
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.40 E-value=8.9e-06 Score=85.80 Aligned_cols=356 Identities=14% Similarity=0.077 Sum_probs=208.5
Q ss_pred hhhhhhhhccccC-c---hHHHHHHHHHhccc-ccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccc
Q 010918 14 DVLQPLLTTSNSS-S---LKDALEILIESSKT-TVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEI 88 (497)
Q Consensus 14 ~~~~~~~~~~~~~-~---~~~~l~~L~~~~k~-~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~ 88 (497)
.++..|...-.+. + -.+++++|.+++.. ...|..+....+.+.++++|++ +....-..++++|.|+|...+
T Consensus 130 g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~----~~~~vr~~A~~aL~~l~~~~~ 205 (530)
T 1wa5_B 130 GVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYT----GSVEVKEQAIWALGNVAGDST 205 (530)
T ss_dssp TCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHH----CCHHHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcC----CCHHHHHHHHHHHHHHhCCCc
Confidence 4666676665544 2 56788899988874 3455545556788888988874 355667788999999999999
Q ss_pred hhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcC-cccHHHHHhhhchhHHHHHhcCCCCCccCcee
Q 010918 89 TNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAG-ETHQHAIWCQFFPDEFATLAGVRCQETCDPLC 167 (497)
Q Consensus 89 ~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n-~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~ 167 (497)
.+...+...+.+..+..++.. .+..+.+.++..|+|++.+. +..+..+=..+.|- +..++..+|..+....|
T Consensus 206 ~~~~~~~~~~~l~~L~~ll~~------~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~-L~~lL~~~d~~v~~~a~ 278 (530)
T 1wa5_B 206 DYRDYVLQCNAMEPILGLFNS------NKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPT-LAKLIYSMDTETLVDAC 278 (530)
T ss_dssp HHHHHHHHTTCHHHHHHGGGS------CCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHH-HHHHTTCCCHHHHHHHH
T ss_pred cchHHHHHcCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHH-HHHHHcCCCHHHHHHHH
Confidence 999999999999999888876 23467889999999999876 44444444455555 55577888888888889
Q ss_pred eeehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcch---hHHHHHHHHhHhcCcHHH-HHHhhhhcCCCcccCCC
Q 010918 168 MVIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKED---WFKFLVSRTCVEEIHFPQ-LFFKLSQVGASRNCEDS 243 (497)
Q Consensus 168 MViytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~e---wl~lli~~~~le~~~l~~-ly~~ls~~~~~~~~e~~ 243 (497)
.+|.++..++.+....+.....++.+++++. +++.+ ..-+.+...+..++...+ ++.
T Consensus 279 ~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~-----~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~-------------- 339 (530)
T 1wa5_B 279 WAISYLSDGPQEAIQAVIDVRIPKRLVELLS-----HESTLVQTPALRAVGNIVTGNDLQTQVVIN-------------- 339 (530)
T ss_dssp HHHHHHHSSCHHHHHHHHHTTCHHHHHHGGG-----CSCHHHHHHHHHHHHHHTTSCHHHHHHHHH--------------
T ss_pred HHHHHHhCCCHHHHHHHHhcCcHHHHHHHHC-----CCChhhHHHHHHHHHHHHcCCHHHHHHHHH--------------
Confidence 9999988776666666655445555443332 12221 111122211111111000 000
Q ss_pred CCCCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhh-hhhhhhcCCC------CCCCCchhHHHHHhH
Q 010918 244 NSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIG-LVDFYARGTP------SLPTSSSAINVLGYS 316 (497)
Q Consensus 244 ~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~-~v~~~~~~~~------~l~t~~~~~d~L~~s 316 (497)
.-++..+...+......+ ...|.|.+..+..... .+........ -+.... .++-..+
T Consensus 340 -----------~~~l~~L~~lL~~~~~~v---r~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~--~~v~~~a 403 (530)
T 1wa5_B 340 -----------AGVLPALRLLLSSPKENI---KKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAE--YKTKKEA 403 (530)
T ss_dssp -----------TTHHHHHHHHTTCSCHHH---HHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSC--HHHHHHH
T ss_pred -----------cchHHHHHHHHcCCCHHH---HHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCC--HHHHHHH
Confidence 012222333332211000 0111222222211000 0000000000 000000 1222356
Q ss_pred HHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHH
Q 010918 317 LSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDL 396 (497)
Q Consensus 317 L~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~l 396 (497)
...|..++...... ++..+++...|++..++.+|..- -+.++...
T Consensus 404 ~~aL~~l~~~~~~~-------~~~~~~l~~~~~l~~L~~ll~~~----------------------------~~~v~~~a 448 (530)
T 1wa5_B 404 CWAISNASSGGLQR-------PDIIRYLVSQGCIKPLCDLLEIA----------------------------DNRIIEVT 448 (530)
T ss_dssp HHHHHHHHHHTTTC-------THHHHHHHHTTCHHHHHHHTTTC----------------------------CHHHHHHH
T ss_pred HHHHHHHHhcCCCc-------HHHHHHHHHCCCHHHHHHHHhCC----------------------------CHHHHHHH
Confidence 67777777532100 13456777889999998887531 11456666
Q ss_pred HHHHHhhccCChh-----------hHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCCh
Q 010918 397 VAVIGNCAYRRKH-----------IQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNA 452 (497)
Q Consensus 397 vrli~nl~~~~~~-----------~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~ 452 (497)
+..|++++...+. ....+.+.||++.+.... .+.|+.++|.|..+|.++...-+
T Consensus 449 l~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~L~~L~--~~~~~~v~~~a~~il~~~~~~~~ 513 (530)
T 1wa5_B 449 LDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQ--QNENDKIYEKAYKIIETYFGEEE 513 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGGG--GCSCHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHhhhhhhhcccccccHHHHHHHHcCcHHHHHHHH--cCCCHHHHHHHHHHHHHHCCccc
Confidence 7777777754432 456788899999988754 56789999999999999886544
No 21
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=98.38 E-value=1.4e-05 Score=83.78 Aligned_cols=132 Identities=19% Similarity=0.257 Sum_probs=99.4
Q ss_pred hHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHh
Q 010918 54 LPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSL 133 (497)
Q Consensus 54 ~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~ 133 (497)
.+.+.++|++- ....-..+.+.|||+|.+.+.+...+++.|++..++++|++. +..+.+.+...|.|++.
T Consensus 4 l~~lv~~L~s~----~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~------~~~~~~~A~~aL~nLa~ 73 (457)
T 1xm9_A 4 IPKAVQYLSSQ----DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP------NQNVQQAAAGALRNLVF 73 (457)
T ss_dssp HHHHHHHHHSS----CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSS------CHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHCCC----CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCC------CHHHHHHHHHHHHHHhc
Confidence 45566677642 234567789999999988888888999999999999998753 24577899999999999
Q ss_pred cCcccHHHHHhhhchhHHHHHhc-CCCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHH
Q 010918 134 AGETHQHAIWCQFFPDEFATLAG-VRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIV 197 (497)
Q Consensus 134 ~n~~~Q~~IW~~~fP~~f~~ll~-~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v 197 (497)
.|.+++..|-..-.-..|..+++ .++.++.-..+..|+|+..+ ++.-..+.. .+++.+++++
T Consensus 74 ~~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~-~~~~~~i~~-g~i~~Lv~ll 136 (457)
T 1xm9_A 74 RSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRV 136 (457)
T ss_dssp SCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS-SSTHHHHHH-HHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC-HHhHHHHHh-ccHHHHHHHH
Confidence 99999999988876666888887 77777777778889998843 222222334 5677666666
No 22
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=98.37 E-value=8.2e-07 Score=81.49 Aligned_cols=170 Identities=17% Similarity=0.201 Sum_probs=131.9
Q ss_pred hhhhhhhhccccCchHHHHHHHHHhc-ccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhh
Q 010918 14 DVLQPLLTTSNSSSLKDALEILIESS-KTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQK 92 (497)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~l~~L~~~~-k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~ 92 (497)
..|-.|+.-++..--.++++.|..++ ....+|..+....+++.++++|++ ++-+....+.++|.|+|.+...+..
T Consensus 15 ~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~----~~~~v~~~a~~~L~~l~~~~~~~~~ 90 (210)
T 4db6_A 15 PQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSS----PNEQILQEALWALSNIASGGNEQIQ 90 (210)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC----SCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcC----CCHHHHHHHHHHHHHHhcCCcHHHH
Confidence 34555555444445778999999998 456666666667788888888863 3556778889999999999999999
Q ss_pred HHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehh
Q 010918 93 SFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYT 172 (497)
Q Consensus 93 ~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViyt 172 (497)
.+++.+++..+..++... +..+.+.++..|+|++.+++...+.+...-.-..+..++..++.++....+..|.|
T Consensus 91 ~i~~~g~i~~L~~lL~~~------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~ 164 (210)
T 4db6_A 91 AVIDAGALPALVQLLSSP------NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSN 164 (210)
T ss_dssp HHHHTTCHHHHHHHTTCS------CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCC------cHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999999999999988664 24577799999999999999998888877666667778888888888888999999
Q ss_pred hccCCchhhHhhhcccchHHH
Q 010918 173 CCDGSSGLFKELCGDKGLAIM 193 (497)
Q Consensus 173 c~~~s~er~~eL~~~~~i~i~ 193 (497)
++.++++....+....++..+
T Consensus 165 l~~~~~~~~~~~~~~g~i~~L 185 (210)
T 4db6_A 165 IASGGNEQKQAVKEAGALEKL 185 (210)
T ss_dssp HHTSCHHHHHHHHHTTHHHHH
T ss_pred HHcCCcHHHHHHHHCCCHHHH
Confidence 986656655555554445544
No 23
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=98.21 E-value=0.00019 Score=75.23 Aligned_cols=376 Identities=11% Similarity=0.065 Sum_probs=211.6
Q ss_pred ccCchHHHHHHHHHhccccc-CCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHH
Q 010918 24 NSSSLKDALEILIESSKTTV-GRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGI 102 (497)
Q Consensus 24 ~~~~~~~~l~~L~~~~k~~~-~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~ 102 (497)
+...-..+.++|..+++... .|..+......+.+.++|++ .+.+.-..+.++|||++.+.+.|...|++.|++..
T Consensus 15 ~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s----~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~ 90 (457)
T 1xm9_A 15 DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS----PNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIRE 90 (457)
T ss_dssp CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTS----SCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcC----CCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHH
Confidence 33446788899999886544 46557777888888888873 33455678899999999988999999999999999
Q ss_pred HHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcC--------C--------CCCccCce
Q 010918 103 VLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGV--------R--------CQETCDPL 166 (497)
Q Consensus 103 ~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~--------~--------d~k~~~~~ 166 (497)
+.++|+... +..+.+.+.-.|+|++.. ++.+..|...+.|.+ ..++.. + +.++....
T Consensus 91 Lv~lL~~~~-----~~~~~~~a~~aL~nLa~~-~~~~~~i~~g~i~~L-v~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a 163 (457)
T 1xm9_A 91 AVSLLRRTG-----NAEIQKQLTGLLWNLSST-DELKEELIADALPVL-ADRVIIPFSGWCDGNSNMSREVVDPEVFFNA 163 (457)
T ss_dssp HHHHHTTCC-----CHHHHHHHHHHHHHHHTS-SSTHHHHHHHHHHHH-HHHTTHHHHTCC---------CCCHHHHHHH
T ss_pred HHHHHhhCC-----CHHHHHHHHHHHHHHhcC-HHhHHHHHhccHHHH-HHHHhccccccccCccchhcccccHHHHHHH
Confidence 999997321 245777889999999988 788888888666664 445521 1 11222356
Q ss_pred eeeehhhccCCchhhHhhhcc-cchHHHHHHHHHHhhcC-CcchhH---HHHHHHHhHh----cC---------------
Q 010918 167 CMVIYTCCDGSSGLFKELCGD-KGLAIMAEIVCTAASVG-FKEDWF---KFLVSRTCVE----EI--------------- 222 (497)
Q Consensus 167 ~MViytc~~~s~er~~eL~~~-~~i~i~~e~v~~a~~~~-~d~ewl---~lli~~~~le----~~--------------- 222 (497)
+..|+|++.+ ++..+.+.+. .+++.++.++......+ ++.... -.++....+. -+
T Consensus 164 ~~aL~nLs~~-~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~~ 242 (457)
T 1xm9_A 164 TGCLRNLSSA-DAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 242 (457)
T ss_dssp HHHHHHHTTS-HHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC-----
T ss_pred HHHHHHHccC-HHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhccCcchhhhcccccccccc
Confidence 8889999855 5555555554 56777777776532221 222211 1111111100 00
Q ss_pred --cHHHHHHhhhhcCCCcccCCCCCCCCCCChhHh------HHHHHHHHHhhccc-cccccCchhHHHHHHHHHhh----
Q 010918 223 --HFPQLFFKLSQVGASRNCEDSNSREGTFSSEQA------FLLEIVSEIVNERI-EEIIVPNDFALSVLGIFTKS---- 289 (497)
Q Consensus 223 --~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqv------tLL~ll~a~l~e~~-~di~v~~~~a~~l~~~F~~~---- 289 (497)
..+.+|...+.... ....+.....+..+++++ -.++.+...+.+.. .++ ..-+.|.+.-+...
T Consensus 243 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~~~~~---~e~a~~aL~nl~~~~~~~ 318 (457)
T 1xm9_A 243 EKSSTGCFSNKSDKMM-NNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT---LEACAGALQNLTASKGLM 318 (457)
T ss_dssp ------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHH---HHHHHHHHHHHTTCSSSH
T ss_pred cccccchhhccchhhh-hccccCCccccccCchHHHHHhCcchHHHHHHHHhhcCCHHH---HHHHHHHHHHhccCcCcc
Confidence 00112221100000 000000000000111221 22344444443221 111 12233333333210
Q ss_pred hhhh-hhhhcCCCCCCC-----CchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCC
Q 010918 290 IGLV-DFYARGTPSLPT-----SSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPP 363 (497)
Q Consensus 290 a~~v-~~~~~~~~~l~t-----~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~ 363 (497)
...+ ....++.-.+|. .+...++...+...|+.++.. .+ ...+...|.+..++.+|..-++.
T Consensus 319 ~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~------~~------~~~~i~~~~i~~Lv~lL~~~~~~ 386 (457)
T 1xm9_A 319 SSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH------PL------LHRVMGNQVFPEVTRLLTSHTGN 386 (457)
T ss_dssp HHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTS------GG------GHHHHHHHTHHHHHHTTTSCCSC
T ss_pred hHHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhcC------HH------HHHHHHHhhhHHHHHhccCCCCC
Confidence 0011 111111000110 001123334567778877741 11 23444456788888888743211
Q ss_pred hhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHh
Q 010918 364 AIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWC 443 (497)
Q Consensus 364 ~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~ 443 (497)
...........++.++|++-.+++....+.+.||++.+.+...-+ .|+-+++-|-+.
T Consensus 387 ----------------------~~~~~~v~~~~l~~l~ni~~~~~~~~~~i~~~g~l~~L~~L~~~~-~~~~i~~~A~~~ 443 (457)
T 1xm9_A 387 ----------------------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS-ASPKAAEAARLL 443 (457)
T ss_dssp ----------------------STTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred ----------------------CCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHHcCC-CcHHHHHHHHHH
Confidence 011224566788899999999999999999999999998887744 588999999999
Q ss_pred HhhhhcC
Q 010918 444 VRNLLEG 450 (497)
Q Consensus 444 iRnL~e~ 450 (497)
+.|+...
T Consensus 444 L~~~~~~ 450 (457)
T 1xm9_A 444 LSDMWSS 450 (457)
T ss_dssp HHTTSSS
T ss_pred HHHHHcc
Confidence 9998854
No 24
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=98.21 E-value=3e-06 Score=78.85 Aligned_cols=170 Identities=16% Similarity=0.189 Sum_probs=133.6
Q ss_pred hhhhhhhhccccCc---hHHHHHHHHHhccc-ccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch
Q 010918 14 DVLQPLLTTSNSSS---LKDALEILIESSKT-TVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT 89 (497)
Q Consensus 14 ~~~~~~~~~~~~~~---~~~~l~~L~~~~k~-~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~ 89 (497)
..+.+|...-.|.+ -+.++++|..++.. ..+|..+....+++.+.++|++ ...+....+.++|+|+|...+.
T Consensus 44 g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~----~~~~v~~~a~~~L~~l~~~~~~ 119 (252)
T 4hxt_A 44 GGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTS----TDSEVQKEAARALANIASGPDE 119 (252)
T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC----SSHHHHHHHHHHHHHHTTSCHH
T ss_pred CCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcC----CCHHHHHHHHHHHHHHHcCCHH
Confidence 45556655555444 66788899999987 7788877777888888888873 4567788899999999999999
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeee
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMV 169 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MV 169 (497)
++..+.+.+++..+.+++... +..+.+.++..|+|++..++...+.+...-.-..+..++..++.++....+..
T Consensus 120 ~~~~~~~~~~i~~L~~~l~~~------~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~ 193 (252)
T 4hxt_A 120 AIKAIVDAGGVEVLVKLLTST------DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARA 193 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCS------CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCC------CHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHH
Confidence 999999999999998888753 24577899999999999999887777776655667778888888888888999
Q ss_pred ehhhccCCchhhHhhhcccchHHH
Q 010918 170 IYTCCDGSSGLFKELCGDKGLAIM 193 (497)
Q Consensus 170 iytc~~~s~er~~eL~~~~~i~i~ 193 (497)
|.+++.++++..+.+....++..+
T Consensus 194 L~~l~~~~~~~~~~l~~~~~i~~L 217 (252)
T 4hxt_A 194 LANIASGPTSAIKAIVDAGGVEVL 217 (252)
T ss_dssp HHHHTTSBHHHHHHHHHTTHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCHHHH
Confidence 999887666666666555555544
No 25
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=98.15 E-value=4.6e-05 Score=83.42 Aligned_cols=133 Identities=17% Similarity=0.161 Sum_probs=96.4
Q ss_pred hHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHh
Q 010918 54 LPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSL 133 (497)
Q Consensus 54 ~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~ 133 (497)
.+.+.++|.+ ...+.-..+...|+|+|.+...|...|++.|+|..++++|++.. ..+.+.+.-.|+|++.
T Consensus 50 i~~LV~~L~s----~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~------~~vq~~Aa~AL~nLa~ 119 (584)
T 3l6x_A 50 LPEVIAMLGF----RLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPK------KEVHLGACGALKNISF 119 (584)
T ss_dssp HHHHHHHTTC----SCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSS------HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHCC----CCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCC------HHHHHHHHHHHHHHHc
Confidence 4666677753 23445566678899999999999999999999999999998743 3577889999999999
Q ss_pred c-CcccHHHHHhhhchhHHHHHhcC-CCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHHH
Q 010918 134 A-GETHQHAIWCQFFPDEFATLAGV-RCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIVC 198 (497)
Q Consensus 134 ~-n~~~Q~~IW~~~fP~~f~~ll~~-~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v~ 198 (497)
+ |.+++..|..+-.-..|..+++. ++.++....+-.|+|+-.. ++.-..+. ..+++.+++++.
T Consensus 120 ~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~-~~~k~~I~-~~alp~Lv~LL~ 184 (584)
T 3l6x_A 120 GRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSH-DSIKMEIV-DHALHALTDEVI 184 (584)
T ss_dssp SSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTS-GGGHHHHH-HHTHHHHHHHTH
T ss_pred cCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-chhhHHHH-hccHHHHHHHHh
Confidence 7 89999999998766667777764 5555555556678888732 12112222 236777666654
No 26
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.05 E-value=1.3e-05 Score=75.45 Aligned_cols=169 Identities=16% Similarity=0.185 Sum_probs=124.6
Q ss_pred hhhhhhhhccccCchHHHHHHHHH-hcccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhh
Q 010918 14 DVLQPLLTTSNSSSLKDALEILIE-SSKTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQK 92 (497)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~l~~L~~-~~k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~ 92 (497)
+.+..++.-++...-..+++.|.. +++...+|..+....+.+.+.++|++ +.......+.++|+|+|.+...|+.
T Consensus 15 ~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~----~~~~v~~~a~~~L~~l~~~~~~~~~ 90 (252)
T 4db8_A 15 PQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSS----PNEQILQEALWALSNIASGGNEQIQ 90 (252)
T ss_dssp HHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGC----SCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcC----CCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 344445555566667788888844 55566677767777888888988874 3366778889999999999999999
Q ss_pred HHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehh
Q 010918 93 SFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYT 172 (497)
Q Consensus 93 ~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViyt 172 (497)
.+++.+++..+..++... +..+.+.++..|+|++...+..+..+...-.-..+..++..++.++....+..+.+
T Consensus 91 ~i~~~g~i~~L~~lL~~~------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~ 164 (252)
T 4db8_A 91 AVIDAGALPALVQLLSSP------NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSN 164 (252)
T ss_dssp HHHHTTHHHHHHHGGGCS------CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHcCC------CHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999999998773 24577799999999999888876777776555556777777777777777778877
Q ss_pred hccCCchhhHhhhcccchHH
Q 010918 173 CCDGSSGLFKELCGDKGLAI 192 (497)
Q Consensus 173 c~~~s~er~~eL~~~~~i~i 192 (497)
+..++++....+.....++.
T Consensus 165 l~~~~~~~~~~~~~~~~i~~ 184 (252)
T 4db8_A 165 IASGGNEQIQAVIDAGALPA 184 (252)
T ss_dssp HTTSCHHHHHHHHHTTCHHH
T ss_pred HHcCChHHHHHHHHCCCHHH
Confidence 77555444444433333333
No 27
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=98.02 E-value=3e-05 Score=85.44 Aligned_cols=261 Identities=15% Similarity=0.181 Sum_probs=155.6
Q ss_pred CCcHHHHHHHHHHHHhhccccch-hhhHHhhc-chhHHHHHHhcCCCCCCCchhHHHH-HHHHHHHHHHhcCcccHHHH-
Q 010918 67 SSGCHYLLLSLKLLRNLCAGEIT-NQKSFIEQ-TGVGIVLRVLRSPGVNLDKDYGIIR-IALQVLANVSLAGETHQHAI- 142 (497)
Q Consensus 67 ~~~~~~l~~clR~LRNlCa~~~~-NQ~~i~~~-~~i~~~~~ll~~~~~~~e~~~~~~r-~glQ~LgNia~~n~~~Q~~I- 142 (497)
......-.-.+++|+.+|...+. +|+.|... +|+..+..+|.+.+ .++| .++-+|.+++.+|.+-|+.|
T Consensus 133 ~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~r-------E~iRneallLL~~Lt~~n~~iQklVA 205 (651)
T 3grl_A 133 EFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSR-------EVIRNDGVLLLQALTRSNGAIQKIVA 205 (651)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSS-------HHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCch-------HHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 34555566779999999999988 99999966 78888888887643 4889 59999999999999999998
Q ss_pred HhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHHHHHhhcCCcchhHHHHHHHHhHhcC
Q 010918 143 WCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIVCTAASVGFKEDWFKFLVSRTCVEEI 222 (497)
Q Consensus 143 W~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v~~a~~~~~d~ewl~lli~~~~le~~ 222 (497)
...+||-+|..+..-.. +. ..||.--|+ .++..+++ .+.-. -..|.|.+
T Consensus 206 FEnaFe~Lf~Ii~~Eg~---~~-Ggivv~DCL----------------~ll~nLLr------~N~sN-----Q~~FrEt~ 254 (651)
T 3grl_A 206 FENAFERLLDIITEEGN---SD-GGIVVEDCL----------------ILLQNLLK------NNNSN-----QNFFKEGS 254 (651)
T ss_dssp HTTHHHHHHHHHHHHTG---GG-SHHHHHHHH----------------HHHHHHHT------TCHHH-----HHHHHHTT
T ss_pred HhccHHHHHHHHHhcCC---Cc-cchhHHHHH----------------HHHHHHHh------cCHHH-----HHHHHHcC
Confidence 44788887764432110 00 112211111 11111110 00000 00112222
Q ss_pred cHHHHHHhhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhhhhcCCCC
Q 010918 223 HFPQLFFKLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDFYARGTPS 302 (497)
Q Consensus 223 ~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~~~~~~~~ 302 (497)
.++.+-.-+.. + + ....|+ +|
T Consensus 255 ~i~~L~~LL~~-~-----~----~~~~W~-~Q------------------------------------------------ 275 (651)
T 3grl_A 255 YIQRMKPWFEV-G-----D----ENSGWS-AQ------------------------------------------------ 275 (651)
T ss_dssp CGGGGGGGGCC-C-----S----CSSCCC-HH------------------------------------------------
T ss_pred CHHHHHHHhCC-C-----c----cccccH-HH------------------------------------------------
Confidence 22222111100 0 0 000111 11
Q ss_pred CCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCccc
Q 010918 303 LPTSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAK 382 (497)
Q Consensus 303 l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~ 382 (497)
-...+..++.+++.++.-.+.. + ..+.-++.+.+.|++..++.++..-.
T Consensus 276 ------k~~N~~~~L~iIrlLv~~~~~~---~-~t~~nQ~~~~~~g~l~~Ll~ll~~~~--------------------- 324 (651)
T 3grl_A 276 ------KVTNLHLMLQLVRVLVSPNNPP---G-ATSSCQKAMFQCGLLQQLCTILMATG--------------------- 324 (651)
T ss_dssp ------HHHHHHHHHHHHHHHTCTTSCH---H-HHHHHHHHHHHTTHHHHHHHHHTCSS---------------------
T ss_pred ------HHHHHHHHHHHHHHHhCCCCCC---C-CCHHHHHHHHHCCCHHHHHHHHccCC---------------------
Confidence 0112224688888888522110 0 01123567778999999988876311
Q ss_pred ccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhc-----ChH----HHhhhcccCCCCCcchhhhHHhHhhhhcCChH
Q 010918 383 SAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERD-----GIL----LLLQQCVTDEDNPFSREWGIWCVRNLLEGNAE 453 (497)
Q Consensus 383 ~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~-----gi~----liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~ 453 (497)
....+|...++.+|.++..|+.+|+++.+.. -.| ++++. .-+.+-+-+|==|.+|++-.+.+|++
T Consensus 325 -----~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~~p~li~lL~~~-~~~~~~~~lR~Aa~~cl~ay~~~N~~ 398 (651)
T 3grl_A 325 -----VPADILTETINTVSEVIRGCQVNQDYFASVNAPSNPPRPAIVVLLMSM-VNERQPFVLRCAVLYCFQCFLYKNQK 398 (651)
T ss_dssp -----CCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSCEEHHHHHHHHH-TCTTSCHHHHHHHHHHHHHHHTTCHH
T ss_pred -----CCHHHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCCcChHHHHHHHH-hcccccHHHHHHHHHHHHHHHhCCHH
Confidence 1237889999999999999999999998765 222 23332 22333344588889999999999999
Q ss_pred HHHHHHhc
Q 010918 454 NQKVVADL 461 (497)
Q Consensus 454 nQ~~i~~L 461 (497)
.|..|..-
T Consensus 399 ~Q~~i~~~ 406 (651)
T 3grl_A 399 GQGEIVST 406 (651)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99877654
No 28
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=98.01 E-value=0.00076 Score=73.79 Aligned_cols=393 Identities=12% Similarity=0.064 Sum_probs=218.0
Q ss_pred hhhhhhhccccCc---hHHHHHHHHHhcc-cccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccc-cch
Q 010918 15 VLQPLLTTSNSSS---LKDALEILIESSK-TTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAG-EIT 89 (497)
Q Consensus 15 ~~~~~~~~~~~~~---~~~~l~~L~~~~k-~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~-~~~ 89 (497)
.+.+|...=.|.+ -.++.++|..+++ ...+|..+......|.+.++|++ .+...-......|||++.+ ...
T Consensus 49 ~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s----~~~~vq~~Aa~AL~nLa~~~~~~ 124 (584)
T 3l6x_A 49 ELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDH----PKKEVHLGACGALKNISFGRDQD 124 (584)
T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGC----SSHHHHHHHHHHHHHHTSSSCHH
T ss_pred cHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCC----CCHHHHHHHHHHHHHHHccCCHH
Confidence 3444443333433 3568888988885 77788877777778888888874 3455667778999999997 699
Q ss_pred hhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhc-------------
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAG------------- 156 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~------------- 156 (497)
|...|++.|+|..++++|+... +..+.+.+.-.|.|++. +++++..|=..+.|-+. .++.
T Consensus 125 nk~~I~~~GaIp~LV~LL~s~~-----~~~~~e~aa~aL~nLS~-~~~~k~~I~~~alp~Lv-~LL~~p~sg~~~~~~~~ 197 (584)
T 3l6x_A 125 NKIAIKNCDGVPALVRLLRKAR-----DMDLTEVITGTLWNLSS-HDSIKMEIVDHALHALT-DEVIIPHSGWEREPNED 197 (584)
T ss_dssp HHHHHHHTTHHHHHHHHHHHCC-----SHHHHHHHHHHHHHHTT-SGGGHHHHHHHTHHHHH-HHTHHHHHCCC------
T ss_pred HHHHHHHcCCHHHHHHHHcCCC-----CHHHHHHHHHHHHHHhC-CchhhHHHHhccHHHHH-HHHhccccccccccccc
Confidence 9999999999999999997532 23466677788999987 78888888777766543 3331
Q ss_pred -----CCCCCccCceeeeehhhccCCchhhHhhhcccc-hHHHHHHHHHHhh-cCCcch------hHHHHHHHHhHhc-C
Q 010918 157 -----VRCQETCDPLCMVIYTCCDGSSGLFKELCGDKG-LAIMAEIVCTAAS-VGFKED------WFKFLVSRTCVEE-I 222 (497)
Q Consensus 157 -----~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~-i~i~~e~v~~a~~-~~~d~e------wl~lli~~~~le~-~ 222 (497)
.+|.++.-...-+|+|+.-.+.+--+.+...-| +.-++.++...-. ..++.. |.-+=++..+-+. +
T Consensus 198 ~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav~aL~NLs~~~~~e~~ 277 (584)
T 3l6x_A 198 CKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIP 277 (584)
T ss_dssp ----CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHST
T ss_pred ccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHHHHHHHhhcccccccc
Confidence 123344444566777776333222222222223 3344566654321 112222 3222222111000 0
Q ss_pred ---cHHH-HHH-hhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccc-cccccCchhHHHHHHHHHhh----hhh
Q 010918 223 ---HFPQ-LFF-KLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERI-EEIIVPNDFALSVLGIFTKS----IGL 292 (497)
Q Consensus 223 ---~l~~-ly~-~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~-~di~v~~~~a~~l~~~F~~~----a~~ 292 (497)
.+.. ... ... ..+.+.++ .+.. -|...+..+.+.+++.. .++ ..-|.+.+.-+... +..
T Consensus 278 ~~~~~~~~~~~~~~~--~~~~~~~G---ve~L---~~~~~v~~Ll~LL~~s~~~~v---~E~Aa~AL~nL~ag~~~~~~~ 346 (584)
T 3l6x_A 278 QAERYQEAAPNVANN--TGTSPARG---YELL---FQPEVVRIYISLLKESKTPAI---LEASAGAIQNLCAGRWTYGRY 346 (584)
T ss_dssp TCCC----------------CCCCG---GGGG---GSHHHHHHHHHHHHHCCCHHH---HHHHHHHHHHHHSSCSHHHHH
T ss_pred chhhhhhhccccccc--ccccCchh---HHHH---hcccHHHHHHHHHccCCCHHH---HHHHHHHHHHHHcCCccccHH
Confidence 0100 000 000 00000000 0000 12233455555553211 111 01122222222100 000
Q ss_pred hhhhhcCCCCCCC-----CchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhh
Q 010918 293 VDFYARGTPSLPT-----SSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIR 367 (497)
Q Consensus 293 v~~~~~~~~~l~t-----~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~ 367 (497)
+....+..-.+|. .+...++...+...|+.|+... .. ...+ ..|.+..++.+|..-+.+
T Consensus 347 ~~~~v~~~~glp~Lv~LL~s~~~~v~~~A~~aL~nLs~~~----~~-------~~~I-~~g~ip~LV~LL~~~~~~---- 410 (584)
T 3l6x_A 347 IRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDA----RN-------KELI-GKHAIPNLVKNLPGGQQN---- 410 (584)
T ss_dssp HHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTC----SC-------HHHH-HHHHHHHHHHTSSSSSCS----
T ss_pred HHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhCCh----hH-------HHHH-HhCCHHHHHHHhcCCccc----
Confidence 0001110000000 0001133345677777777421 11 2233 456677777777542110
Q ss_pred hhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhh
Q 010918 368 KAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNL 447 (497)
Q Consensus 368 k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL 447 (497)
+............++.++|++-.++++...|.+.||||.+.+...-....|-+++-|-+++.||
T Consensus 411 ----------------~~~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl 474 (584)
T 3l6x_A 411 ----------------SSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTI 474 (584)
T ss_dssp ----------------GGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHH
T ss_pred ----------------ccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCCChHHHHHHHHHHHHH
Confidence 0011123566779999999999999999999999999999999876556889999999999999
Q ss_pred hcCChHHHHHHHhcc
Q 010918 448 LEGNAENQKVVADLE 462 (497)
Q Consensus 448 ~e~n~~nQ~~i~~L~ 462 (497)
.. +.++|..+.+-.
T Consensus 475 ~~-~~elr~~~kk~G 488 (584)
T 3l6x_A 475 WG-YKELRKPLEKEG 488 (584)
T ss_dssp HT-SHHHHHHHHTTT
T ss_pred Hc-CHHHHHHHHHcC
Confidence 87 999999999843
No 29
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=97.95 E-value=0.00051 Score=77.83 Aligned_cols=341 Identities=11% Similarity=0.049 Sum_probs=197.4
Q ss_pred ccCchHHHHHHHHHhcccccCCccccc-ccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccch-------------
Q 010918 24 NSSSLKDALEILIESSKTTVGRSDLAS-KNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEIT------------- 89 (497)
Q Consensus 24 ~~~~~~~~l~~L~~~~k~~~~R~~~a~-~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~------------- 89 (497)
+....+.+.+.|-.++...+.|+.+.. ....|.+.++|++ . .......+++.|-|++.+...
T Consensus 392 d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s-~---d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~ 467 (810)
T 3now_A 392 DKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARG-G---NQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKF 467 (810)
T ss_dssp CSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHT-T---CGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTT
T ss_pred CHHHHHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhCC-C---ChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHH
Confidence 455689999999999999999998873 5788999999974 1 233566889999999986532
Q ss_pred ----------------hh---hHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhH
Q 010918 90 ----------------NQ---KSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDE 150 (497)
Q Consensus 90 ----------------NQ---~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~ 150 (497)
++ ..+++-|.+..+.+++++.+ ..+-..+...|+|++ ++++++..|..+-.-..
T Consensus 468 s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s------~~vqe~Aa~aL~NLA-~d~~~r~~Vv~~Gaip~ 540 (810)
T 3now_A 468 AKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTES------HNSQELIARVLNAVC-GLKELRGKVVQEGGVKA 540 (810)
T ss_dssp TCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCC------HHHHHHHHHHHHHHH-TSHHHHHHHHHTTHHHH
T ss_pred hhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcCCC------HHHHHHHHHHHHHHc-CCHHHHHHHHHCCCHHH
Confidence 22 56778888888888988644 346668899999998 57788888888743334
Q ss_pred HHHHhcCCCCCccCceeeeehhhc-cCCchhhHhhhc-ccchHHHHHHHHHHhhcCCcc----h--h-HHHH------HH
Q 010918 151 FATLAGVRCQETCDPLCMVIYTCC-DGSSGLFKELCG-DKGLAIMAEIVCTAASVGFKE----D--W-FKFL------VS 215 (497)
Q Consensus 151 f~~ll~~~d~k~~~~~~MViytc~-~~s~er~~eL~~-~~~i~i~~e~v~~a~~~~~d~----e--w-l~ll------i~ 215 (497)
+..+++-.+.++.-..+-.|.+++ ..+++.+-.... ..+++-+++++. ...+. + | +..| ..
T Consensus 541 Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~----~~~~~l~~~eAl~AL~NLa~~~d~~~ 616 (810)
T 3now_A 541 LLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQ----QDCTALENFESLMALTNLASMNESVR 616 (810)
T ss_dssp HHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTS----TTSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhC----CCCcHHHHHHHHHHHHHHhcCCHHHH
Confidence 556665554443333334444443 222221100000 001222222211 00000 0 1 0000 01
Q ss_pred HHhHhcCcHHHHHHhhhhcCCCcccCCCCCCCCCCChhHhHHHHHHHHHhhccccccccCchhHHHHHHHHHhhhhhhhh
Q 010918 216 RTCVEEIHFPQLFFKLSQVGASRNCEDSNSREGTFSSEQAFLLEIVSEIVNERIEEIIVPNDFALSVLGIFTKSIGLVDF 295 (497)
Q Consensus 216 ~~~le~~~l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eqvtLL~ll~a~l~e~~~di~v~~~~a~~l~~~F~~~a~~v~~ 295 (497)
..+++.+-++.+..-|... ...-|..-++.|..+....+ ....|...++.+..
T Consensus 617 ~~Ii~aG~l~~Lv~LL~s~---------------~~~Vq~~A~~~L~NLa~~~~------------~~~~~v~~~g~l~~ 669 (810)
T 3now_A 617 QRIIKEQGVSKIEYYLMED---------------HLYLTRAAAQCLCNLVMSED------------VIKMFEGNNDRVKF 669 (810)
T ss_dssp HHHHHTTHHHHHHHHHHSC---------------CTTHHHHHHHHHHHHTTSHH------------HHHHHHSSSSHHHH
T ss_pred HHHHHcCCHHHHHHHHcCC---------------CHHHHHHHHHHHHHHhCChH------------HHHHHHhccCcHHH
Confidence 1233334444444433210 01123233333333332110 01111111111100
Q ss_pred hhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhh-cccHHHHHHHhhhcCCChhhhhhhhcCC
Q 010918 296 YARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQS-HGLIEMFLSLLRDLEPPAIIRKAMRQGE 374 (497)
Q Consensus 296 ~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~-~gLle~lI~LLr~l~~~~~i~k~~~~~~ 374 (497)
...- +..+ ..++-..+...|..|++.. ++..+.+.+ .|.++.++.||+.
T Consensus 670 Lv~L-L~s~----d~~vq~~Aa~ALanLt~~s----------~~~~~~ii~~~g~I~~Lv~LL~s--------------- 719 (810)
T 3now_A 670 LALL-CEDE----DEETATACAGALAIITSVS----------VKCCEKILAIASWLDILHTLIAN--------------- 719 (810)
T ss_dssp HHHG-GGCS----SHHHHHHHHHHHHHHHHHC----------HHHHHHHHTSTTHHHHHHHHHTC---------------
T ss_pred HHHH-hcCC----CHHHHHHHHHHHHHHhCCC----------HHHHHHHHHHcCCHHHHHHHHCC---------------
Confidence 0000 0000 0122224566777777521 123556666 8999999998862
Q ss_pred CCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcc-cCCCCCcchhhhHHhHhhhhc
Q 010918 375 NQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCV-TDEDNPFSREWGIWCVRNLLE 449 (497)
Q Consensus 375 ~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~-iD~~nP~~rEwai~~iRnL~e 449 (497)
+-.++|..-+..++|++..+++...++.+.||++.+.+... -|++++-++|-|.-|+.++++
T Consensus 720 -------------~d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~ 782 (810)
T 3now_A 720 -------------PSPAVQHRGIVIILNMINAGEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAER 782 (810)
T ss_dssp -------------SSHHHHHHHHHHHHHHHTTCHHHHHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHH
T ss_pred -------------CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHhCcccCcHHHHHHHHHHHHHHHh
Confidence 12377888899999999999999999999999999998854 467899999999999999975
No 30
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=97.78 E-value=3.2e-05 Score=79.30 Aligned_cols=164 Identities=16% Similarity=0.170 Sum_probs=124.4
Q ss_pred hhhhhhhhc-cc--c-CchHHHHHHHHHhcc-cccCCcccc-cccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhcc--
Q 010918 14 DVLQPLLTT-SN--S-SSLKDALEILIESSK-TTVGRSDLA-SKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCA-- 85 (497)
Q Consensus 14 ~~~~~~~~~-~~--~-~~~~~~l~~L~~~~k-~~~~R~~~a-~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa-- 85 (497)
..+.+|... .. + .-.+.++.+|.+++. .+++|..+. .....+.+.++|++-+.....+....+..+|||+|.
T Consensus 170 G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~ 249 (354)
T 3nmw_A 170 GSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLI 249 (354)
T ss_dssp THHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhc
Confidence 345555553 22 2 235667888999988 667776665 567788888888643322223566778899999997
Q ss_pred -ccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccC
Q 010918 86 -GEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCD 164 (497)
Q Consensus 86 -~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~ 164 (497)
++..|...+++.+++..+.++|+..+ ..+.+.+.=.|+|++.++++.+..|+..-.-..|..++..++.++..
T Consensus 250 a~~~~~~~~i~~~g~i~~Lv~lL~~~~------~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~ 323 (354)
T 3nmw_A 250 ATNEDHRQILRENNCLQTLLQHLKSHS------LTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAM 323 (354)
T ss_dssp TTCHHHHHHHHTTTHHHHHHHHTTCSC------HHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCSSHHHHH
T ss_pred cCCHHHHHHHHHcCCHHHHHHHHcCCC------hHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHH
Confidence 89999999999999999999987633 45778899999999999999999999886555577888888888888
Q ss_pred ceeeeehhhccCCchhhHh
Q 010918 165 PLCMVIYTCCDGSSGLFKE 183 (497)
Q Consensus 165 ~~~MViytc~~~s~er~~e 183 (497)
..+..|.|++.+++++.++
T Consensus 324 ~A~~aL~nL~~~~~~~~~~ 342 (354)
T 3nmw_A 324 GSAAALRNLMANRPAKYKD 342 (354)
T ss_dssp HHHHHHHHHHTTCCGGGC-
T ss_pred HHHHHHHHHHcCCHHHHhh
Confidence 8899999999777776664
No 31
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=97.76 E-value=3.7e-05 Score=77.08 Aligned_cols=160 Identities=12% Similarity=0.069 Sum_probs=120.3
Q ss_pred hHHHHHHHHHhcccccCCcccccccchHHHHH-hhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHH
Q 010918 28 LKDALEILIESSKTTVGRSDLASKNILPEVLQ-LTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRV 106 (497)
Q Consensus 28 ~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~-il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~l 106 (497)
-..++..|.++....++...+..-..++.+++ +|++ +....-..+.++|.|++.+.+.+|..+++.|++..+.++
T Consensus 57 k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s----~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~L 132 (296)
T 1xqr_A 57 REGALELLADLCENMDNAADFCQLSGMHLLVGRYLEA----GAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRL 132 (296)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTC----SSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcC----CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHH
Confidence 45688888888888777766655567777777 7752 345677788999999999999999999999999999999
Q ss_pred hcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhh-hchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhh
Q 010918 107 LRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQ-FFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELC 185 (497)
Q Consensus 107 l~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~-~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~ 185 (497)
|+... ...+.+.++-.|+|++.+++..++.+=.. .+| .+..+++.+|.++....|..|.+++.++.+....+.
T Consensus 133 L~~~~-----~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~-~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv 206 (296)
T 1xqr_A 133 LDRDA-----CDTVRVKALFAISCLVREQEAGLLQFLRLDGFS-VLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLC 206 (296)
T ss_dssp HHHCS-----CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH-HHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred HccCC-----CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHH-HHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 87421 24678899999999999999988776653 455 566677778888877788888888766555555555
Q ss_pred cccchHHHHHHH
Q 010918 186 GDKGLAIMAEIV 197 (497)
Q Consensus 186 ~~~~i~i~~e~v 197 (497)
....++.++.++
T Consensus 207 ~~g~i~~Lv~LL 218 (296)
T 1xqr_A 207 SMGMVQQLVALV 218 (296)
T ss_dssp HTTHHHHHHHHH
T ss_pred HcCCHHHHHHHH
Confidence 444444444333
No 32
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=97.73 E-value=9.1e-05 Score=67.69 Aligned_cols=132 Identities=17% Similarity=0.223 Sum_probs=100.7
Q ss_pred ccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHH
Q 010918 51 KNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLAN 130 (497)
Q Consensus 51 ~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgN 130 (497)
...++.+..+|+ .+..+....+.+.|+|+|.+...++..+++.+++..+..+|... +..+...++..|+|
T Consensus 11 ~~~~~~l~~LL~----s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~------~~~v~~~a~~~L~~ 80 (210)
T 4db6_A 11 GSELPQMVQQLN----SPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP------NEQILQEALWALSN 80 (210)
T ss_dssp --CHHHHHHHTT----CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS------CHHHHHHHHHHHHH
T ss_pred cchhHHHHHHhc----CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC------CHHHHHHHHHHHHH
Confidence 345666777775 34456778899999999999999999999999999999988764 23567799999999
Q ss_pred HHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcccchHH
Q 010918 131 VSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAI 192 (497)
Q Consensus 131 ia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i 192 (497)
++.+++..+..+...-.-..+..++..++..+....+.+|.|+..++.+..+.+....+++.
T Consensus 81 l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~ 142 (210)
T 4db6_A 81 IASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPA 142 (210)
T ss_dssp HTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHH
T ss_pred HhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHH
Confidence 99999999888887766666777888888777777888888887655555544443333443
No 33
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=97.70 E-value=4.5e-05 Score=81.02 Aligned_cols=163 Identities=17% Similarity=0.163 Sum_probs=123.3
Q ss_pred hhhhhhhhc-ccc---CchHHHHHHHHHhcc-cccCCcccc-cccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhcc--
Q 010918 14 DVLQPLLTT-SNS---SSLKDALEILIESSK-TTVGRSDLA-SKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCA-- 85 (497)
Q Consensus 14 ~~~~~~~~~-~~~---~~~~~~l~~L~~~~k-~~~~R~~~a-~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa-- 85 (497)
..+.+|... ..| .-.+.++.+|-+++. .+++|..+. .....+.+.++|++-+.....+....+..+|||++.
T Consensus 286 GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~ 365 (458)
T 3nmz_A 286 GSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLI 365 (458)
T ss_dssp THHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcc
Confidence 345666663 332 225667888999888 667777665 556778888887643322223567778889999997
Q ss_pred -ccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccC
Q 010918 86 -GEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCD 164 (497)
Q Consensus 86 -~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~ 164 (497)
++..|...|++.+++..+..+|+... ..+.+.+.-.|+|++.++++.+..|...-.-..+..++..++.++..
T Consensus 366 a~~~~~~~~i~~~G~i~~Lv~LL~~~~------~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~ 439 (458)
T 3nmz_A 366 ATNEDHRQILRENNCLQTLLQHLKSHS------LTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAM 439 (458)
T ss_dssp TTCHHHHHHHHHTTHHHHHHHHSSCSC------HHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCSSHHHHH
T ss_pred cCCHHHHHHHHHcccHHHHHHHHcCCC------hHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHH
Confidence 89999999999999999989887633 45788899999999999999999999886555678888888888888
Q ss_pred ceeeeehhhccCCchhhH
Q 010918 165 PLCMVIYTCCDGSSGLFK 182 (497)
Q Consensus 165 ~~~MViytc~~~s~er~~ 182 (497)
..++.|.|++.+++.+.+
T Consensus 440 ~Aa~AL~nL~~~~p~ky~ 457 (458)
T 3nmz_A 440 GSAAALRNLMANRPAKYK 457 (458)
T ss_dssp HHHHHHHHHHTCCSCC--
T ss_pred HHHHHHHHHHcCCHhhhc
Confidence 889999999976665544
No 34
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=97.59 E-value=0.00067 Score=67.86 Aligned_cols=159 Identities=10% Similarity=0.105 Sum_probs=125.9
Q ss_pred hhhhhh-ccccCc---hHHHHHHHHHhccc-ccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchh
Q 010918 16 LQPLLT-TSNSSS---LKDALEILIESSKT-TVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITN 90 (497)
Q Consensus 16 ~~~~~~-~~~~~~---~~~~l~~L~~~~k~-~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~N 90 (497)
+.+|+. .-.|.+ -+.|.++|-..+.. +..|..+.....++.++++|++ ++.......++..|-|+|.+.+.+
T Consensus 83 l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~---~~~~~v~~~A~~ALsnl~~~~~~~ 159 (296)
T 1xqr_A 83 MHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDR---DACDTVRVKALFAISCLVREQEAG 159 (296)
T ss_dssp HHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH---CSCHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHcc---CCCHHHHHHHHHHHHHHHcCCcHH
Confidence 445555 333433 45688888887764 4566656666888999999975 334667888999999999999999
Q ss_pred hhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHHHhcCCCCCccCceeeee
Q 010918 91 QKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFATLAGVRCQETCDPLCMVI 170 (497)
Q Consensus 91 Q~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ll~~~d~k~~~~~~MVi 170 (497)
+..|.+.+++..+.++|... +..+.+.+.-.|+|++.++.+.++.+-..-+...+..+++.+|.++....+..|
T Consensus 160 ~~~~~~~ggi~~L~~lL~~~------d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL 233 (296)
T 1xqr_A 160 LLQFLRLDGFSVLMRAMQQQ------VQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGAL 233 (296)
T ss_dssp HHHHHHTTHHHHHHHHHHSS------CHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHcCC------CHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHH
Confidence 99999999999999988753 356888999999999999999999998887777788899999999999999999
Q ss_pred hhhccCCchhhHh
Q 010918 171 YTCCDGSSGLFKE 183 (497)
Q Consensus 171 ytc~~~s~er~~e 183 (497)
.++..++...+++
T Consensus 234 ~~l~~~~~~~~~~ 246 (296)
T 1xqr_A 234 CSLVTDFPQGVRE 246 (296)
T ss_dssp HHHHTTCHHHHHH
T ss_pred HHHHhCChhHHHH
Confidence 9999665444443
No 35
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=97.47 E-value=0.0037 Score=70.85 Aligned_cols=310 Identities=11% Similarity=0.129 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCccc-----------
Q 010918 70 CHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETH----------- 138 (497)
Q Consensus 70 ~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~----------- 138 (497)
-+....+...|.+++.+.........+.+.+..++.++... +..+..-++-.|+|++.+.++.
T Consensus 393 ~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s~------d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~ 466 (810)
T 3now_A 393 KDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARGG------NQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAK 466 (810)
T ss_dssp SSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHTT------CGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTT
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhCCC------ChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHH
Confidence 34566777788888877666555555567778888988752 3457778899999999976421
Q ss_pred ------------------H---HHHHhhhchhHHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcccchHHHHHHH
Q 010918 139 ------------------Q---HAIWCQFFPDEFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGDKGLAIMAEIV 197 (497)
Q Consensus 139 ------------------Q---~~IW~~~fP~~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~~~i~i~~e~v 197 (497)
+ +.|-.+-.-..|..+++.++.++..-.+-+|+|+. ++.+....+....+++.++.++
T Consensus 467 ~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA-~d~~~r~~Vv~~Gaip~Lv~LL 545 (810)
T 3now_A 467 FAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVC-GLKELRGKVVQEGGVKALLRMA 545 (810)
T ss_dssp TTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHH-TSHHHHHHHHHTTHHHHHHHHH
T ss_pred HhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHc-CCHHHHHHHHHCCCHHHHHHHH
Confidence 1 34545444455788889888888888889999998 3334444444444566665555
Q ss_pred HHHhhcCCcchhHHHHHHHHhHh-cCc-----------HHHHHHhhhhcCCCcccCCCCCCCCCCChhH-hHHHHHHHHH
Q 010918 198 CTAASVGFKEDWFKFLVSRTCVE-EIH-----------FPQLFFKLSQVGASRNCEDSNSREGTFSSEQ-AFLLEIVSEI 264 (497)
Q Consensus 198 ~~a~~~~~d~ewl~lli~~~~le-~~~-----------l~~ly~~ls~~~~~~~~e~~~~~~~~~~~eq-vtLL~ll~a~ 264 (497)
...... .-+.--|-+++.+.- ++. ++.|..-|.. + .+..+ .--+..|..
T Consensus 546 ~s~~~~--~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~--------------~-~~~l~~~eAl~AL~N- 607 (810)
T 3now_A 546 LEGTEK--GKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQ--------------D-CTALENFESLMALTN- 607 (810)
T ss_dssp HSSCHH--HHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTST--------------T-SCHHHHHHHHHHHHH-
T ss_pred ccCCHH--HHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCC--------------C-CcHHHHHHHHHHHHH-
Confidence 422100 011233333333321 111 1222221110 0 01111 001111111
Q ss_pred hhccccccccCchhHHHHHHHHHhh-hhhhhhhhcCCCCCCCCchhHHHHHhHHHHHHHHhhccCCCCCCCcchhhhHHH
Q 010918 265 VNERIEEIIVPNDFALSVLGIFTKS-IGLVDFYARGTPSLPTSSSAINVLGYSLSILRNICAREDPAGSSSVNRADLVDS 343 (497)
Q Consensus 265 l~e~~~di~v~~~~a~~l~~~F~~~-a~~v~~~~~~~~~l~t~~~~~d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~ 343 (497)
|...+++ ...- +.... ...+.....+. .+ .+-..+...+..|+.- ++.++.
T Consensus 608 La~~~d~------~~~~---Ii~aG~l~~Lv~LL~s~------~~--~Vq~~A~~~L~NLa~~-----------~~~~~~ 659 (810)
T 3now_A 608 LASMNES------VRQR---IIKEQGVSKIEYYLMED------HL--YLTRAAAQCLCNLVMS-----------EDVIKM 659 (810)
T ss_dssp HTTSCHH------HHHH---HHHTTHHHHHHHHHHSC------CT--THHHHHHHHHHHHTTS-----------HHHHHH
T ss_pred HhcCCHH------HHHH---HHHcCCHHHHHHHHcCC------CH--HHHHHHHHHHHHHhCC-----------hHHHHH
Confidence 1111000 0000 00000 00000000000 00 0112345566666531 123444
Q ss_pred Hhh-cccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhHHHHHHHHhhccCChhhHHHHHH-hcChH
Q 010918 344 LQS-HGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRRDLVAVIGNCAYRRKHIQDEIRE-RDGIL 421 (497)
Q Consensus 344 L~~-~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~-~~gi~ 421 (497)
+.. .|.+..++.||+. +-.+.|+.....|+|++..++.....|.+ .||||
T Consensus 660 ~v~~~g~l~~Lv~LL~s----------------------------~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~ 711 (810)
T 3now_A 660 FEGNNDRVKFLALLCED----------------------------EDEETATACAGALAIITSVSVKCCEKILAIASWLD 711 (810)
T ss_dssp HHSSSSHHHHHHHGGGC----------------------------SSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHH
T ss_pred HHhccCcHHHHHHHhcC----------------------------CCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHH
Confidence 444 6777777777652 11267888888999999987777777766 89999
Q ss_pred HHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHHHHHhcc
Q 010918 422 LLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQKVVADLE 462 (497)
Q Consensus 422 liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~~L~ 462 (497)
.+...+. ..++-+++.|.|||.|++.++++..+.|.+.+
T Consensus 712 ~Lv~LL~--s~d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G 750 (810)
T 3now_A 712 ILHTLIA--NPSPAVQHRGIVIILNMINAGEEIAKKLFETD 750 (810)
T ss_dssp HHHHHHT--CSSHHHHHHHHHHHHHHHTTCHHHHHHHHTST
T ss_pred HHHHHHC--CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCC
Confidence 9998875 67899999999999999999998887777654
No 36
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=97.11 E-value=0.0004 Score=67.53 Aligned_cols=70 Identities=21% Similarity=0.231 Sum_probs=62.7
Q ss_pred chhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHHHHHhcc
Q 010918 391 GFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQKVVADLE 462 (497)
Q Consensus 391 g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~~L~ 462 (497)
..+..-.+.|.|+|++++.++..|++.||||.+...= +..+|-++|.|.+|+|||..+|++|+..|.+-.
T Consensus 25 ~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL--~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~G 94 (233)
T 3tt9_A 25 SRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLL--KVQNEDVQRAVCGALRNLVFEDNDNKLEVAELN 94 (233)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGG--GCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHH--cCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcC
Confidence 6677777889999999999999999999999998875 347899999999999999999999999998743
No 37
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=96.70 E-value=0.035 Score=61.27 Aligned_cols=116 Identities=10% Similarity=0.059 Sum_probs=82.5
Q ss_pred hHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCcchhH
Q 010918 315 YSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYIGFRR 394 (497)
Q Consensus 315 ~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~g~k~ 394 (497)
-+|.++..|...+. --+++++..|++..++.+|.. + . +...|.+=|.
T Consensus 231 DCL~ll~nLLr~N~----------sNQ~~FrEt~~i~~L~~LL~~-----------~-~-----------~~~~W~~Qk~ 277 (651)
T 3grl_A 231 DCLILLQNLLKNNN----------SNQNFFKEGSYIQRMKPWFEV-----------G-D-----------ENSGWSAQKV 277 (651)
T ss_dssp HHHHHHHHHHTTCH----------HHHHHHHHTTCGGGGGGGGCC-----------C-S-----------CSSCCCHHHH
T ss_pred HHHHHHHHHHhcCH----------HHHHHHHHcCCHHHHHHHhCC-----------C-c-----------cccccHHHHH
Confidence 36777877775321 125778888888887766631 0 0 1125665443
Q ss_pred H----HHHHHHhhccC------ChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCChHHHHHHHhccc
Q 010918 395 D----LVAVIGNCAYR------RKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNAENQKVVADLEL 463 (497)
Q Consensus 395 ~----lvrli~nl~~~------~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~~L~~ 463 (497)
. .+.+|.-++-. .+.+|+.+.+.||++.+++--..+.--+-+|--|+.|+-.++.||+.||+.+++...
T Consensus 278 ~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~v 356 (651)
T 3grl_A 278 TNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNA 356 (651)
T ss_dssp HHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhhccC
Confidence 2 34455555554 678999999999999988876655445568899999999999999999999998873
No 38
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=96.05 E-value=0.0038 Score=60.57 Aligned_cols=114 Identities=11% Similarity=0.099 Sum_probs=83.1
Q ss_pred chHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHH
Q 010918 53 ILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVS 132 (497)
Q Consensus 53 ~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia 132 (497)
-++.+.++|++- +...+......+.++|+|.+...|...|++.|+|..++++|++.. ..+.+.+.-.|.|++
T Consensus 9 ~i~~lV~lL~s~--~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~------~~vq~~Aa~aL~nLa 80 (233)
T 3tt9_A 9 TLERAVSMLEAD--HMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQN------EDVQRAVCGALRNLV 80 (233)
T ss_dssp CHHHHHHTCCSS--CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCC------HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhCCC--CchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCC------HHHHHHHHHHHHHHH
Confidence 345666666532 222245556678899999999999999999999999999997643 357778999999999
Q ss_pred hcCcccHHHHHhhhchhHHHHHhc-CCCCCccCceeeeehhhc
Q 010918 133 LAGETHQHAIWCQFFPDEFATLAG-VRCQETCDPLCMVIYTCC 174 (497)
Q Consensus 133 ~~n~~~Q~~IW~~~fP~~f~~ll~-~~d~k~~~~~~MViytc~ 174 (497)
.+|++++..|-.+-.-..|..+++ .++.++....+-.|+|+-
T Consensus 81 ~~~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS 123 (233)
T 3tt9_A 81 FEDNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLS 123 (233)
T ss_dssp TTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 999999999998866666777775 445444443344455543
No 39
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=88.90 E-value=0.44 Score=52.43 Aligned_cols=134 Identities=19% Similarity=0.215 Sum_probs=93.6
Q ss_pred HHHHhHHHHHHHHhhccCCCCCCCcchhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccccCCCc
Q 010918 311 NVLGYSLSILRNICAREDPAGSSSVNRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAKTCPYI 390 (497)
Q Consensus 311 d~L~~sL~lL~~Lc~~~~~~s~~~~~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~ 390 (497)
++-..+...|+.||.-+ ++|+.+++...|.+-.+..+|+... .+............ .......+
T Consensus 91 ~Vr~~A~gaLrnL~~~~---------g~d~~~~l~~~~il~~L~~~l~~~~------~~~~~~~~~~~~~~-~~~~~~~~ 154 (684)
T 4gmo_A 91 DSRAAGWEILKVLAQEE---------EADFCVHLYRLDVLTAIEHAAKAVL------ETLTTSEPPFSKLL-KAQQRLVW 154 (684)
T ss_dssp HHHHHHHHHHHHHHHHS---------CHHHHHHHHHTTHHHHHHHHHHHHH------HHHHCBTTBGGGSC-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc---------CchHHHHHHHcChHHHHHHHHHhhH------HHHhhhcccccccc-HHHHHHHH
Confidence 34446788999999643 2468889999998888888887532 11111000000000 00111233
Q ss_pred chhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhc-ccCCCCCcchhhhHHhHhhhhcCChHHHHHHHh
Q 010918 391 GFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQC-VTDEDNPFSREWGIWCVRNLLEGNAENQKVVAD 460 (497)
Q Consensus 391 g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c-~iD~~nP~~rEwai~~iRnL~e~n~~nQ~~i~~ 460 (497)
.+-..++.++.+||-.+.+..+.|.+.++++.++..+ ..|...+-++.+|.-|+.+|.++|++.-+.|..
T Consensus 155 ~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~ 225 (684)
T 4gmo_A 155 DITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLISADIAPQDIYEEAISCLTTLSEDNLKVGQAITD 225 (684)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhccCHHHHHHHHh
Confidence 4556788899999999999999999999999999887 446566679999999999999999987666655
No 40
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=84.83 E-value=2.9 Score=45.95 Aligned_cols=164 Identities=13% Similarity=0.096 Sum_probs=108.9
Q ss_pred ccccCchHHHHHHHHHhcccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccc-cchhhhHHhhcchh
Q 010918 22 TSNSSSLKDALEILIESSKTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAG-EITNQKSFIEQTGV 100 (497)
Q Consensus 22 ~~~~~~~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~-~~~NQ~~i~~~~~i 100 (497)
-+++.+-..|+.+|.++......|.-+..+++.+.++..+ ++ ++..+.-.+++.+|||+|.. +......+.+.+.+
T Consensus 45 S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~l--L~-D~~~~Vr~~A~gaLrnL~~~~g~d~~~~l~~~~il 121 (684)
T 4gmo_A 45 SPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTET--LT-DNNIDSRAAGWEILKVLAQEEEADFCVHLYRLDVL 121 (684)
T ss_dssp SSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTT--TT-CSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHH--cC-CCCHHHHHHHHHHHHHHHhhcCchHHHHHHHcChH
Confidence 3445557789999999998888888666666665544322 12 67778889999999999986 46777777777766
Q ss_pred HHHHHHhcCC-------CCC----CC----chhHHHHHHHHHHHHHHhcCcccHHHHHh-hhchhHHHHHhcCCC--CCc
Q 010918 101 GIVLRVLRSP-------GVN----LD----KDYGIIRIALQVLANVSLAGETHQHAIWC-QFFPDEFATLAGVRC--QET 162 (497)
Q Consensus 101 ~~~~~ll~~~-------~~~----~e----~~~~~~r~glQ~LgNia~~n~~~Q~~IW~-~~fP~~f~~ll~~~d--~k~ 162 (497)
..+..+++.. ... .+ ..+.+.-..+.+|.|++.++.+..+.|=. ...|.++..+..... .++
T Consensus 122 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~~~~~~~~v 201 (684)
T 4gmo_A 122 TAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLISADIAPQDI 201 (684)
T ss_dssp HHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHHHCCSCHHH
T ss_pred HHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHHhcCCCcHHH
Confidence 5555544321 110 00 11223335678899999998888777754 356666665554332 236
Q ss_pred cCceeeeehhhccCCchhhHhhhccc
Q 010918 163 CDPLCMVIYTCCDGSSGLFKELCGDK 188 (497)
Q Consensus 163 ~~~~~MViytc~~~s~er~~eL~~~~ 188 (497)
....+-.||++.++|.+.++.+..+.
T Consensus 202 ~~~a~~~L~~ls~dn~~~~~~i~~~~ 227 (684)
T 4gmo_A 202 YEEAISCLTTLSEDNLKVGQAITDDQ 227 (684)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhccCHHHHHHHHhcc
Confidence 66677788998888888888776653
No 41
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=79.70 E-value=1.2 Score=50.32 Aligned_cols=120 Identities=13% Similarity=0.084 Sum_probs=72.4
Q ss_pred HHHHHHHHHhhcccc----chhhhHHhh-cchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccH-HHHHhhh
Q 010918 73 LLLSLKLLRNLCAGE----ITNQKSFIE-QTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQ-HAIWCQF 146 (497)
Q Consensus 73 l~~clR~LRNlCa~~----~~NQ~~i~~-~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q-~~IW~~~ 146 (497)
..++++.|-|++... ..-+..|++ .+.+..+..++.+.. ..+-|++++.++|++. +++.. +.+...-
T Consensus 576 ~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n------~~VrrAA~elI~NL~~-~~e~i~~k~~~~~ 648 (778)
T 3opb_A 576 NYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDEN------VPLQRSTLELISNMMS-HPLTIAAKFFNLE 648 (778)
T ss_dssp HHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSS------HHHHHHHHHHHHHHHT-SGGGTGGGTSCCS
T ss_pred HHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCC------HHHHHHHHHHHHHHhC-CcHHHHHHHHhhc
Confidence 568899999998875 223455555 477777777776532 3578899999999997 44431 1221111
Q ss_pred chh------HHHHHhcCCCCCccCceeeeehhhccCCchhhHhhhcc-cchHHHHHHHHH
Q 010918 147 FPD------EFATLAGVRCQETCDPLCMVIYTCCDGSSGLFKELCGD-KGLAIMAEIVCT 199 (497)
Q Consensus 147 fP~------~f~~ll~~~d~k~~~~~~MViytc~~~s~er~~eL~~~-~~i~i~~e~v~~ 199 (497)
-|. .+..++...|.++.-..+..+-++.-+++...+.+... .|+..+++++.+
T Consensus 649 ~~~~~~rL~lLV~Ll~s~D~~~r~AAagALAnLts~~~~ia~~ll~~~~gi~~Ll~lL~~ 708 (778)
T 3opb_A 649 NPQSLRNFNILVKLLQLSDVESQRAVAAIFANIATTIPLIAKELLTKKELIENAIQVFAD 708 (778)
T ss_dssp SHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CchhhccHHHHHHHHcCCCHHHHHHHHHHHHHhcCCChHHHHHHHHccccHHHHHHHHhc
Confidence 132 46667777777776666666666542333444555554 455555554443
No 42
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=72.87 E-value=20 Score=36.87 Aligned_cols=123 Identities=13% Similarity=0.090 Sum_probs=75.4
Q ss_pred hHHHHHHHHhhccCCCCCCC-c--------chhhhHHHHhhcccHHHHHHHhhhcCCChhhhhhhhcCCCCCCCcccccc
Q 010918 315 YSLSILRNICAREDPAGSSS-V--------NRADLVDSLQSHGLIEMFLSLLRDLEPPAIIRKAMRQGENQEGTSAKSAK 385 (497)
Q Consensus 315 ~sL~lL~~Lc~~~~~~s~~~-~--------~~~d~~~~L~~~gLle~lI~LLr~l~~~~~i~k~~~~~~~~~~~~~~~~~ 385 (497)
.+..+|.+|..|.......+ + ...+-++.|+..|.++.++.+|...-++...+...+ -+. ...+.
T Consensus 249 ~v~~~L~dLi~F~~~~~~~~~~~l~~~~g~p~r~RQkLlrEq~il~ll~~iL~~~f~~~~~~~~~~-~~~-----l~~~~ 322 (381)
T 1n4k_A 249 SVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDCGDGPMLR-LEE-----LGDQR 322 (381)
T ss_dssp HHHHHHHHHHHHHTTTSCCSSCSGGGGGCCCCHHHHHHHHHTTHHHHHHHHHHGGGC-----------------------
T ss_pred HHHHHHHHHHHHhcCcchhcccchhhhcCCccHHHHHHHHhhChHHHHHHHHHhhccccCccchhh-HHH-----hcchh
Confidence 45667777766544332110 0 011246778889999999999987532211111000 000 00112
Q ss_pred cCCCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCCCcchhhhHHhHhhhhcCCh
Q 010918 386 TCPYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDNPFSREWGIWCVRNLLEGNA 452 (497)
Q Consensus 386 ~~~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~nP~~rEwai~~iRnL~e~n~ 452 (497)
..+|..+=+.+-|+|+.+|-.++.||..+-+ -++.+..++..| --|.-||--|+.+|.
T Consensus 323 ~~~~~~i~~l~Y~LL~~~~~~~r~Nq~y~ak--~~~~~q~qig~~-------~~a~d~i~~ll~nN~ 380 (381)
T 1n4k_A 323 HAPFRHICRLCYRVLRHSQQDYRKNQEYIAK--QFGFMQKQIGYD-------VLAEDTITALLHNNR 380 (381)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH--HHHHHHHHHCTT-------HHHHHHHHHHHTTC-
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHH--HHHHHHHHhCcc-------ccHHHHHHHHHhcCC
Confidence 2356667777899999999999999999965 567799999875 456778888888886
No 43
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=64.61 E-value=9.5 Score=43.01 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=51.4
Q ss_pred CCcchhHHHHHHHHhhccCChhhHHHHHHhcChHHHhhhcccCCCC-CcchhhhHHhHhhhhc-CChHH
Q 010918 388 PYIGFRRDLVAVIGNCAYRRKHIQDEIRERDGILLLLQQCVTDEDN-PFSREWGIWCVRNLLE-GNAEN 454 (497)
Q Consensus 388 ~~~g~k~~lvrli~nl~~~~~~~Qd~vr~~~gi~liL~~c~iD~~n-P~~rEwai~~iRnL~e-~n~~n 454 (497)
+..+.|...+++|.|++ .++++++.+.+.||++.++..=.-...+ +-.|+-|..|+-+++. .||+.
T Consensus 469 ~s~~~re~A~~aL~nLS-~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~~ 536 (778)
T 3opb_A 469 LSPNCKQQVVRIIYNIT-RSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPGL 536 (778)
T ss_dssp SCHHHHHHHHHHHHHHH-TSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHHH
T ss_pred CCHHHHHHHHHHHHHHc-CCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHH
Confidence 45689999999999999 6699999999999999999873322111 2379999999999984 45544
No 44
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=51.03 E-value=2.8e+02 Score=30.30 Aligned_cols=98 Identities=8% Similarity=0.080 Sum_probs=47.7
Q ss_pred hHHHHHHHHHhcccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhh-hHHhhcchhHHHHHH
Q 010918 28 LKDALEILIESSKTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQ-KSFIEQTGVGIVLRV 106 (497)
Q Consensus 28 ~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ-~~i~~~~~i~~~~~l 106 (497)
-+.++.+|-..+..... .+. ..++.++..+.+.-.+++-..-..+..++-+.|......- ..+. .+.+..+...
T Consensus 376 R~aa~~alg~i~~~~~~--~~~--~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~-~~ll~~L~~~ 450 (852)
T 4fdd_A 376 KESGILVLGAIAEGCMQ--GMI--PYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYL-KPLMTELLKR 450 (852)
T ss_dssp HHHHHHHHHHTTTTTHH--HHG--GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchH--HHH--HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccchHHHHH-HHHHHHHHHH
Confidence 55666666666654321 111 2334444443332225555566667777777776443211 1100 0111233333
Q ss_pred hcCCCCCCCchhHHHHHHHHHHHHHHhcCc
Q 010918 107 LRSPGVNLDKDYGIIRIALQVLANVSLAGE 136 (497)
Q Consensus 107 l~~~~~~~e~~~~~~r~glQ~LgNia~~n~ 136 (497)
+.+ ....+-+.++..|+|++.+-.
T Consensus 451 L~d------~~~~vr~~a~~aL~~l~~~~~ 474 (852)
T 4fdd_A 451 ILD------SNKRVQEAACSAFATLEEEAC 474 (852)
T ss_dssp HTC------SSHHHHHHHHHHHHHHHHHHG
T ss_pred HhC------CCHHHHHHHHHHHHHHHHHhh
Confidence 332 124466688888899886544
No 45
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=45.64 E-value=56 Score=33.45 Aligned_cols=63 Identities=21% Similarity=0.179 Sum_probs=47.8
Q ss_pred hhhHHhhcchhHHHHHHhcCC---C----------CC---CCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHHH
Q 010918 90 NQKSFIEQTGVGIVLRVLRSP---G----------VN---LDKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFAT 153 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~---~----------~~---~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~~ 153 (497)
-|+.|++.+-+..+..+|..+ . .. ......++|.+.++|+.++-.|+.+|.-+ ..+||....+
T Consensus 283 RQkLlrEq~il~ll~~iL~~~f~~~~~~~~~~~~~l~~~~~~~~~~i~~l~Y~LL~~~~~~~r~Nq~y~-ak~~~~~q~q 361 (381)
T 1n4k_A 283 RQKLMREQNILKQIFKLLQAPFTDCGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYI-AKQFGFMQKQ 361 (381)
T ss_dssp HHHHHHHTTHHHHHHHHHHGGGC-----------------CHHHHHHHHHHHHHHHHHHTTCHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHhhChHHHHHHHHHhhccccCccchhhHHHhcchhhhHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHH
Confidence 688999999998888877443 1 10 12345689999999999999999999977 6678864443
No 46
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=30.07 E-value=77 Score=32.34 Aligned_cols=72 Identities=7% Similarity=0.139 Sum_probs=44.7
Q ss_pred cHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHhcCc-cc-HHHHHhhh
Q 010918 69 GCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLRVLRSPGVNLDKDYGIIRIALQVLANVSLAGE-TH-QHAIWCQF 146 (497)
Q Consensus 69 ~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~-~~-Q~~IW~~~ 146 (497)
....-.+|+||||.++-....-...+.....+..+...+... ....-+.++++|+=+|.-.+ .. -..|+.++
T Consensus 133 d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~------~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al 206 (383)
T 3eg5_B 133 DSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPA------VPNMMIDAAKLLSALCILPQPEDMNERVLEAM 206 (383)
T ss_dssp CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTT------SHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCC------chHHHHHHHHHHHHHHhCcCcCCcHHHHHHHH
Confidence 346678899999988765544444444444444443333322 23455688999999998775 44 66777765
No 47
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=25.21 E-value=1.4e+02 Score=32.12 Aligned_cols=62 Identities=13% Similarity=0.120 Sum_probs=34.2
Q ss_pred hhhHHhhcchhHHHHHHhcCCC-----------CCC---CchhHHHHHHHHHHHHHHhcCcccHHHHHhhhchhHHH
Q 010918 90 NQKSFIEQTGVGIVLRVLRSPG-----------VNL---DKDYGIIRIALQVLANVSLAGETHQHAIWCQFFPDEFA 152 (497)
Q Consensus 90 NQ~~i~~~~~i~~~~~ll~~~~-----------~~~---e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~fP~~f~ 152 (497)
-|+.|++.+-+..+..+|.... ... +....+++.+.|+|+.++-+|..+|.-+=+. +|.++-
T Consensus 474 RQkLlrEq~il~ll~~il~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~Y~LL~~~i~~N~~N~~y~~~~-l~~l~~ 549 (559)
T 2xoa_A 474 RQSLFQEEGMLSLVLNCIDRLNVYTTAAHFAEYAGEEAAESWKEIVNLLYELLASLIRGNRANCALFSTN-LDWVVS 549 (559)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHTTSCC------CCCSTGGGTHHHHHHHHHHHHHHHHCC------------------
T ss_pred HHHHHhhhchHHHHHHHHHHhhccCchhhHHHhhcchhHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHH
Confidence 5999999999999988774211 111 2245689999999999999999998866443 554443
No 48
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=20.06 E-value=1.7e+02 Score=29.65 Aligned_cols=116 Identities=14% Similarity=0.026 Sum_probs=67.9
Q ss_pred CchHHHHHHHHHhcccccCCcccccccchHHHHHhhhcCCCCCcHHHHHHHHHHHHhhccccchhhhHHhhcchhHHHHH
Q 010918 26 SSLKDALEILIESSKTTVGRSDLASKNILPEVLQLTQSIPHSSGCHYLLLSLKLLRNLCAGEITNQKSFIEQTGVGIVLR 105 (497)
Q Consensus 26 ~~~~~~l~~L~~~~k~~~~R~~~a~~~~~~~~l~il~~~s~~~~~~~l~~clR~LRNlCa~~~~NQ~~i~~~~~i~~~~~ 105 (497)
++.++-.++|..+.+-.+-=.+.|.+.|-+.=+..|-+.-......+..-.||.|+++=-....-...+.....|..+..
T Consensus 130 ~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lys 209 (339)
T 3dad_A 130 SSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYT 209 (339)
T ss_dssp CCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHH
Confidence 33444444444443322211245555554443333322222446667888899999987664444444444445566666
Q ss_pred HhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHhhhc
Q 010918 106 VLRSPGVNLDKDYGIIRIALQVLANVSLAGETHQHAIWCQFF 147 (497)
Q Consensus 106 ll~~~~~~~e~~~~~~r~glQ~LgNia~~n~~~Q~~IW~~~f 147 (497)
++.+ .+..+.|-+|-+|-+++..-+.+=..|++.+-
T Consensus 210 lv~s------~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~ 245 (339)
T 3dad_A 210 LCAS------LSRLVVKTALKLLLVFVEYSENNAPLFIRAVN 245 (339)
T ss_dssp GGGC------SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHcC------ccHHHHHHHHHHHHHHHccCcccchHHHHHHH
Confidence 6663 24678999999999999988866667766554
Done!