Query 010922
Match_columns 497
No_of_seqs 225 out of 2463
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 17:05:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 6.5E-60 2.2E-64 501.0 45.5 428 64-497 20-451 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 2.8E-52 9.5E-57 438.7 36.5 382 64-489 12-414 (420)
3 3st8_A Bifunctional protein GL 100.0 1.3E-45 4.6E-50 396.5 29.9 393 62-497 10-444 (501)
4 1hm9_A GLMU, UDP-N-acetylgluco 100.0 1.4E-43 4.7E-48 376.8 31.0 382 65-497 12-435 (468)
5 2ggo_A 401AA long hypothetical 100.0 1.6E-42 5.3E-47 361.6 28.6 353 65-497 1-389 (401)
6 4fce_A Bifunctional protein GL 100.0 9.1E-42 3.1E-46 361.6 26.3 380 64-497 8-430 (459)
7 2v0h_A Bifunctional protein GL 100.0 4.3E-40 1.5E-44 348.4 26.9 380 64-497 5-427 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 3.1E-35 1.1E-39 292.5 24.3 243 64-344 2-271 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 1.6E-33 5.5E-38 278.7 27.3 238 61-345 21-261 (269)
10 2e3d_A UTP--glucose-1-phosphat 100.0 1.1E-32 3.9E-37 276.9 25.4 245 63-347 7-285 (302)
11 2ux8_A Glucose-1-phosphate uri 100.0 1.1E-32 3.7E-37 276.5 20.2 247 63-347 13-283 (297)
12 1tzf_A Glucose-1-phosphate cyt 100.0 7.7E-32 2.6E-36 264.0 22.8 243 65-344 3-251 (259)
13 2pa4_A UTP-glucose-1-phosphate 100.0 1.4E-31 4.6E-36 272.0 22.3 250 62-347 10-286 (323)
14 4evw_A Nucleoside-diphosphate- 100.0 2.1E-31 7.2E-36 261.9 19.0 228 67-339 2-243 (255)
15 1lvw_A Glucose-1-phosphate thy 100.0 5.1E-30 1.7E-34 257.2 27.3 233 64-342 3-241 (295)
16 3pnn_A Conserved domain protei 100.0 6.8E-31 2.3E-35 264.6 20.4 255 64-343 5-291 (303)
17 1fxo_A Glucose-1-phosphate thy 100.0 6.5E-30 2.2E-34 256.3 25.3 232 65-342 3-240 (293)
18 1mc3_A Glucose-1-phosphate thy 100.0 3.7E-30 1.3E-34 258.4 22.3 233 64-342 3-241 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 2.1E-29 7.1E-34 254.2 18.1 240 64-341 4-282 (308)
20 2x65_A Mannose-1-phosphate gua 100.0 3.5E-28 1.2E-32 248.2 16.4 234 64-337 1-270 (336)
21 1jyk_A LICC protein, CTP:phosp 99.9 2.5E-27 8.5E-32 232.5 16.2 221 64-343 25-252 (254)
22 2cu2_A Putative mannose-1-phos 99.9 1.2E-26 4.2E-31 236.8 14.7 232 65-338 3-266 (337)
23 3oam_A 3-deoxy-manno-octuloson 99.9 2.3E-24 7.7E-29 211.2 20.8 238 65-344 3-250 (252)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 2.6E-22 8.8E-27 197.1 17.3 236 65-340 10-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 5.4E-22 1.9E-26 195.7 18.5 237 65-341 19-263 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.9 3E-21 1E-25 185.8 20.6 224 65-341 3-231 (234)
27 1h7e_A 3-deoxy-manno-octuloson 99.9 2E-21 6.7E-26 188.5 17.7 227 65-342 3-238 (245)
28 2xme_A CTP-inositol-1-phosphat 99.9 1.5E-21 5.1E-26 188.2 14.4 215 62-340 16-231 (232)
29 1vic_A 3-deoxy-manno-octuloson 99.8 5.9E-20 2E-24 180.4 20.8 236 65-344 3-254 (262)
30 4fcu_A 3-deoxy-manno-octuloson 99.8 1.8E-19 6.2E-24 176.5 21.1 238 65-344 2-251 (253)
31 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 1.3E-19 4.4E-24 174.2 15.6 225 63-342 1-234 (236)
32 2icy_A Probable UTP-glucose-1- 99.8 5.2E-19 1.8E-23 186.7 21.4 344 63-454 78-469 (469)
33 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.8 1.6E-20 5.6E-25 194.2 8.2 263 185-497 11-319 (374)
34 3f1c_A Putative 2-C-methyl-D-e 99.8 5.9E-19 2E-23 171.9 16.1 229 64-345 3-236 (246)
35 2xwl_A 2-C-methyl-D-erythritol 99.8 2.7E-18 9.1E-23 163.7 16.8 213 65-343 3-220 (223)
36 1vgw_A 4-diphosphocytidyl-2C-m 99.8 1.5E-17 5.2E-22 159.4 20.0 219 64-341 6-228 (231)
37 1ezi_A CMP-N-acetylneuraminic 99.8 5.6E-18 1.9E-22 162.5 16.5 215 65-342 5-224 (228)
38 2dpw_A Hypothetical protein TT 99.8 3.6E-19 1.2E-23 171.9 6.6 199 65-335 3-231 (232)
39 2yc3_A 2-C-methyl-D-erythritol 99.8 3.2E-18 1.1E-22 163.9 13.2 219 64-343 4-226 (228)
40 2i5k_A UTP--glucose-1-phosphat 99.7 4.2E-16 1.4E-20 165.4 24.0 341 60-454 88-485 (488)
41 1qwj_A Cytidine monophospho-N- 99.7 5E-16 1.7E-20 149.4 15.1 214 64-343 3-222 (229)
42 3rsb_A Adenosylcobinamide-phos 99.7 1.5E-16 5.2E-21 148.8 10.1 130 65-222 1-137 (196)
43 1i52_A 4-diphosphocytidyl-2-C- 99.7 1.3E-15 4.3E-20 146.9 16.7 217 64-344 7-230 (236)
44 2waw_A MOBA relate protein; un 99.7 5.9E-16 2E-20 144.5 13.9 187 64-342 5-196 (199)
45 2wee_A MOBA-related protein; u 99.7 5.3E-16 1.8E-20 144.7 12.3 185 64-340 5-194 (197)
46 1vpa_A 2-C-methyl-D-erythritol 99.6 9.2E-15 3.2E-19 140.3 18.3 217 61-343 10-229 (234)
47 2px7_A 2-C-methyl-D-erythritol 99.6 1.1E-14 3.9E-19 140.6 15.6 204 65-343 26-233 (236)
48 1jv1_A Glcnac1P uridyltransfer 99.5 7.2E-14 2.5E-18 148.8 17.6 214 59-294 97-344 (505)
49 3q80_A 2-C-methyl-D-erythritol 99.5 2.7E-13 9.3E-18 130.8 18.9 217 64-341 7-229 (231)
50 2e8b_A Probable molybdopterin- 99.5 2.4E-14 8.2E-19 134.9 8.2 177 65-341 15-198 (201)
51 3r8y_A 2,3,4,5-tetrahydropyrid 99.5 2.5E-15 8.7E-20 145.7 1.2 30 312-344 37-70 (240)
52 3d5n_A Q97W15_sulso; NESG, SSR 99.5 7.9E-14 2.7E-18 131.0 10.2 181 65-342 3-189 (197)
53 1e5k_A Molybdopterin-guanine d 99.5 5.2E-13 1.8E-17 125.9 14.0 109 64-206 6-116 (201)
54 1qre_A Carbonic anhydrase; bet 99.4 4E-13 1.4E-17 130.8 10.3 143 334-497 37-207 (247)
55 3c8v_A Putative acetyltransfer 99.4 2.2E-13 7.6E-18 144.6 8.6 247 163-496 124-392 (496)
56 4e79_A UDP-3-O-acylglucosamine 99.4 2E-12 7E-17 132.5 14.7 46 324-369 78-123 (357)
57 3eh0_A UDP-3-O-[3-hydroxymyris 99.4 4.1E-12 1.4E-16 129.5 14.4 82 326-407 74-160 (341)
58 1j2z_A Acyl-[acyl-carrier-prot 99.3 4.4E-12 1.5E-16 125.1 12.8 146 351-496 4-172 (270)
59 3pmo_A UDP-3-O-[3-hydroxymyris 99.3 9.5E-12 3.2E-16 128.2 15.3 62 435-496 245-312 (372)
60 4eqy_A Acyl-[acyl-carrier-prot 99.3 3.7E-12 1.3E-16 126.4 11.5 144 350-497 24-194 (283)
61 2oeg_A UTP-glucose-1-phosphate 99.3 1.8E-11 6.2E-16 129.9 16.3 347 64-452 75-490 (505)
62 3r0s_A Acyl-[acyl-carrier-prot 99.3 6.2E-12 2.1E-16 123.7 11.8 62 435-497 115-177 (266)
63 2yqc_A UDP-N-acetylglucosamine 99.3 2E-11 6.9E-16 129.5 16.3 214 59-294 98-352 (486)
64 3ngw_A Molybdopterin-guanine d 99.3 5.1E-11 1.8E-15 112.9 16.7 115 65-216 1-117 (208)
65 4e6u_A Acyl-[acyl-carrier-prot 99.3 1E-11 3.4E-16 122.0 11.8 143 351-497 10-179 (265)
66 3oc9_A UDP-N-acetylglucosamine 99.3 5.4E-11 1.8E-15 122.6 17.6 213 59-292 30-275 (405)
67 3ixc_A Hexapeptide transferase 99.3 2.1E-11 7.3E-16 113.8 13.0 117 350-496 29-156 (191)
68 3hsq_A Acyl-[acyl-carrier-prot 99.3 2.6E-11 8.9E-16 118.7 13.9 120 376-496 30-171 (259)
69 3fs8_A QDTC; acetyltransferase 99.3 1.5E-11 5.1E-16 121.1 12.1 66 393-461 71-140 (273)
70 3t57_A UDP-N-acetylglucosamine 99.3 2.2E-11 7.5E-16 122.2 12.9 148 350-497 9-201 (305)
71 1xhd_A Putative acetyltransfer 99.3 3.9E-11 1.3E-15 110.2 12.6 113 353-495 11-133 (173)
72 1v3w_A Ferripyochelin binding 99.3 3.2E-11 1.1E-15 110.8 12.0 107 351-479 7-122 (173)
73 1w55_A ISPD/ISPF bifunctional 99.3 7E-12 2.4E-16 129.0 8.2 195 65-338 4-202 (371)
74 2qia_A UDP-N-acetylglucosamine 99.2 2.4E-11 8.3E-16 119.0 11.6 52 357-408 14-69 (262)
75 3r3r_A Ferripyochelin binding 99.2 6.8E-11 2.3E-15 109.7 13.2 116 351-496 12-144 (187)
76 3r1w_A Carbonic anhydrase; bet 99.2 8E-11 2.7E-15 109.3 13.5 115 353-496 18-148 (189)
77 3mqg_A Lipopolysaccharides bio 99.2 5.2E-11 1.8E-15 111.0 11.9 16 446-461 103-118 (192)
78 3pmo_A UDP-3-O-[3-hydroxymyris 99.2 3.9E-11 1.3E-15 123.7 10.8 169 325-497 95-295 (372)
79 3kwd_A Carbon dioxide concentr 99.2 1.1E-10 3.6E-15 110.9 13.0 115 362-497 41-178 (213)
80 4eqy_A Acyl-[acyl-carrier-prot 99.2 4.7E-11 1.6E-15 118.5 10.8 48 353-408 21-68 (283)
81 3bfp_A Acetyltransferase; LEFT 99.2 3.2E-10 1.1E-14 106.1 15.6 18 325-342 51-68 (194)
82 3hsq_A Acyl-[acyl-carrier-prot 99.2 1.4E-10 4.9E-15 113.4 13.6 18 391-408 78-95 (259)
83 3tv0_A Dynactin subunit 6; LEF 99.2 5E-11 1.7E-15 111.5 9.4 127 361-497 13-147 (194)
84 3eh0_A UDP-3-O-[3-hydroxymyris 99.2 8.1E-11 2.8E-15 119.9 11.4 32 376-407 145-178 (341)
85 3c8v_A Putative acetyltransfer 99.2 1.2E-12 4E-17 139.0 -3.0 97 377-497 280-379 (496)
86 2pig_A Putative transferase; S 99.2 9E-11 3.1E-15 118.9 10.4 27 435-461 152-178 (334)
87 2qia_A UDP-N-acetylglucosamine 99.1 1.2E-10 4E-15 114.1 10.7 87 392-497 83-177 (262)
88 2v0h_A Bifunctional protein GL 99.1 5.4E-11 1.9E-15 125.1 8.7 133 360-495 283-435 (456)
89 3r0s_A Acyl-[acyl-carrier-prot 99.1 1.4E-10 4.9E-15 113.9 11.0 145 352-497 8-171 (266)
90 4e6u_A Acyl-[acyl-carrier-prot 99.1 1.5E-10 5.2E-15 113.6 11.2 55 354-408 7-65 (265)
91 3fs8_A QDTC; acetyltransferase 99.1 2.9E-10 1E-14 111.8 12.6 50 357-410 5-56 (273)
92 3tk8_A 2,3,4,5-tetrahydropyrid 99.1 2.1E-11 7.3E-16 122.6 4.2 36 446-481 219-254 (316)
93 4e79_A UDP-3-O-acylglucosamine 99.1 2.2E-10 7.6E-15 117.4 11.7 61 435-495 228-294 (357)
94 3vbi_A ANTD, galactoside O-ace 99.1 3.4E-10 1.1E-14 106.7 11.8 17 392-408 70-86 (205)
95 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.1 4.3E-10 1.5E-14 115.9 13.6 93 351-461 127-244 (374)
96 1hm9_A GLMU, UDP-N-acetylgluco 99.1 1.5E-10 5.2E-15 122.2 10.4 118 360-497 274-417 (468)
97 3ixc_A Hexapeptide transferase 99.1 6.2E-10 2.1E-14 103.9 13.0 98 376-497 39-145 (191)
98 1j2z_A Acyl-[acyl-carrier-prot 99.1 5.7E-10 1.9E-14 109.9 13.2 51 357-415 4-54 (270)
99 2pig_A Putative transferase; S 99.1 2.5E-10 8.5E-15 115.6 10.8 89 372-463 96-197 (334)
100 4fce_A Bifunctional protein GL 99.1 2.3E-10 7.8E-15 120.4 9.4 79 363-460 271-353 (459)
101 1xhd_A Putative acetyltransfer 99.1 1.2E-09 4.1E-14 100.1 13.1 98 376-497 18-123 (173)
102 3gos_A 2,3,4,5-tetrahydropyrid 99.1 6.6E-10 2.3E-14 109.8 11.5 36 446-481 178-213 (276)
103 3mqg_A Lipopolysaccharides bio 99.0 9.9E-10 3.4E-14 102.3 11.2 99 376-497 21-135 (192)
104 3t57_A UDP-N-acetylglucosamine 99.0 1.6E-09 5.4E-14 108.6 13.4 49 352-408 5-53 (305)
105 3kwd_A Carbon dioxide concentr 99.0 1.1E-09 3.8E-14 103.8 11.5 98 376-497 45-161 (213)
106 3eg4_A 2,3,4,5-tetrahydropyrid 99.0 8.2E-10 2.8E-14 110.5 10.5 27 310-336 61-89 (304)
107 3r3r_A Ferripyochelin binding 99.0 1.9E-09 6.5E-14 99.8 11.4 98 376-497 21-133 (187)
108 3tv0_A Dynactin subunit 6; LEF 99.0 3E-09 1E-13 99.3 12.5 98 376-497 18-135 (194)
109 3r1w_A Carbonic anhydrase; bet 99.0 2.2E-09 7.6E-14 99.4 11.3 98 376-497 25-137 (189)
110 1v3w_A Ferripyochelin binding 99.0 2.5E-09 8.5E-14 98.1 11.5 94 350-462 18-123 (173)
111 3vbi_A ANTD, galactoside O-ace 99.0 3.5E-09 1.2E-13 99.6 12.5 51 392-460 52-106 (205)
112 4ea9_A Perosamine N-acetyltran 99.0 9.1E-09 3.1E-13 97.9 15.4 119 325-461 75-199 (220)
113 3r8y_A 2,3,4,5-tetrahydropyrid 99.0 2.7E-09 9.1E-14 103.1 11.6 28 435-462 172-200 (240)
114 2ggo_A 401AA long hypothetical 99.0 1.6E-09 5.6E-14 112.0 10.2 83 377-478 245-329 (401)
115 3jqy_B NEUO, polysialic acid O 98.9 2.5E-09 8.7E-14 104.1 10.5 62 435-497 112-196 (252)
116 4ea9_A Perosamine N-acetyltran 98.9 3.9E-09 1.3E-13 100.5 10.6 60 392-469 129-189 (220)
117 3eg4_A 2,3,4,5-tetrahydropyrid 98.9 1E-09 3.5E-14 109.9 6.9 33 435-467 209-242 (304)
118 3gos_A 2,3,4,5-tetrahydropyrid 98.9 3E-09 1E-13 105.1 9.5 33 435-467 184-217 (276)
119 1qre_A Carbonic anhydrase; bet 98.9 7.2E-09 2.5E-13 100.6 11.6 97 377-497 66-190 (247)
120 3bfp_A Acetyltransferase; LEFT 98.8 1.5E-08 5.1E-13 94.7 11.1 33 301-333 13-47 (194)
121 2rij_A Putative 2,3,4,5-tetrah 98.8 6.7E-09 2.3E-13 106.2 8.2 27 317-343 164-192 (387)
122 3tk8_A 2,3,4,5-tetrahydropyrid 98.8 1.3E-08 4.5E-13 102.3 10.0 55 359-413 150-207 (316)
123 3nz2_A Hexapeptide-repeat cont 98.8 2.5E-08 8.4E-13 93.4 10.4 36 376-411 76-115 (195)
124 3r5d_A Tetrahydrodipicolinate 98.8 1.3E-08 4.4E-13 101.6 8.6 45 435-481 237-290 (347)
125 3brk_X Glucose-1-phosphate ade 98.8 1.4E-08 4.9E-13 105.9 9.1 66 377-462 303-374 (420)
126 3fsy_A Tetrahydrodipicolinate 98.7 1E-08 3.4E-13 101.6 7.2 48 435-484 214-270 (332)
127 2wlg_A Polysialic acid O-acety 98.7 4.2E-08 1.4E-12 93.0 10.4 29 377-405 59-92 (215)
128 3jqy_B NEUO, polysialic acid O 98.7 1.2E-07 4.2E-12 92.2 12.9 32 377-408 86-121 (252)
129 3ftt_A Putative acetyltransfer 98.7 4.2E-08 1.4E-12 92.1 9.1 50 360-411 60-113 (199)
130 3q1x_A Serine acetyltransferas 98.7 2.7E-08 9.1E-13 99.7 8.0 27 435-461 230-257 (313)
131 3fsy_A Tetrahydrodipicolinate 98.7 1.1E-07 3.8E-12 94.2 12.3 55 393-466 208-270 (332)
132 3srt_A Maltose O-acetyltransfe 98.7 4.8E-08 1.6E-12 90.8 9.0 51 358-410 60-114 (188)
133 3ftt_A Putative acetyltransfer 98.7 1.5E-07 5.2E-12 88.2 12.4 27 435-461 137-164 (199)
134 3hjj_A Maltose O-acetyltransfe 98.7 8.4E-08 2.9E-12 89.3 10.5 50 360-411 64-117 (190)
135 3hjj_A Maltose O-acetyltransfe 98.6 2.3E-07 8E-12 86.2 13.0 27 435-461 141-168 (190)
136 3r5d_A Tetrahydrodipicolinate 98.6 6.1E-08 2.1E-12 96.7 9.2 56 393-467 231-294 (347)
137 4hur_A Virginiamycin A acetylt 98.6 4.1E-08 1.4E-12 93.6 7.5 28 376-407 54-81 (220)
138 3srt_A Maltose O-acetyltransfe 98.6 2.8E-07 9.6E-12 85.6 12.9 14 394-407 78-91 (188)
139 2wlg_A Polysialic acid O-acety 98.6 2.4E-07 8.2E-12 87.7 11.5 50 361-410 59-118 (215)
140 3st8_A Bifunctional protein GL 98.6 1.3E-07 4.3E-12 101.1 10.6 84 376-484 352-444 (501)
141 3mc4_A WW/RSP5/WWP domain:bact 98.6 1.6E-07 5.4E-12 92.8 10.3 29 435-463 223-252 (287)
142 1yp2_A Glucose-1-phosphate ade 98.6 5.5E-08 1.9E-12 102.2 7.6 99 376-495 314-436 (451)
143 1krr_A Galactoside O-acetyltra 98.6 6E-07 2.1E-11 84.5 13.1 50 359-410 60-113 (203)
144 3f1x_A Serine acetyltransferas 98.5 2.1E-07 7.1E-12 93.0 9.6 28 435-462 258-286 (310)
145 1ssq_A SAT, serine acetyltrans 98.5 3.8E-07 1.3E-11 89.4 11.1 27 184-210 19-47 (267)
146 2p2o_A Maltose transacetylase; 98.5 6.6E-07 2.2E-11 83.0 11.8 35 376-410 74-112 (185)
147 4hur_A Virginiamycin A acetylt 98.5 3.4E-07 1.2E-11 87.2 9.5 36 376-411 35-79 (220)
148 1krr_A Galactoside O-acetyltra 98.5 4.2E-07 1.4E-11 85.6 9.6 27 435-461 138-165 (203)
149 3mc4_A WW/RSP5/WWP domain:bact 98.5 2.3E-07 7.9E-12 91.6 7.8 78 377-466 171-249 (287)
150 1ocx_A Maltose O-acetyltransfe 98.4 9.1E-07 3.1E-11 81.8 10.9 35 376-410 72-110 (182)
151 1t3d_A SAT, serine acetyltrans 98.4 8.8E-07 3E-11 87.6 11.1 28 184-211 39-68 (289)
152 3f1x_A Serine acetyltransferas 98.4 3.4E-07 1.2E-11 91.4 8.1 16 446-461 252-267 (310)
153 1ocx_A Maltose O-acetyltransfe 98.4 4.4E-07 1.5E-11 83.9 8.0 27 435-461 135-162 (182)
154 3q1x_A Serine acetyltransferas 98.4 2.4E-07 8.3E-12 92.7 6.6 20 445-464 223-242 (313)
155 1t3d_A SAT, serine acetyltrans 98.4 4.2E-07 1.4E-11 89.9 7.9 62 392-463 183-245 (289)
156 2p2o_A Maltose transacetylase; 98.4 7.8E-07 2.7E-11 82.4 9.3 27 435-461 137-164 (185)
157 3r3i_A UTP--glucose-1-phosphat 98.4 1.7E-05 6E-10 83.8 19.4 352 59-454 122-525 (528)
158 1ssq_A SAT, serine acetyltrans 98.3 1E-06 3.6E-11 86.2 8.7 62 392-463 163-225 (267)
159 3eev_A Chloramphenicol acetylt 98.1 2.9E-06 1E-10 80.1 7.2 17 391-407 57-73 (212)
160 3eev_A Chloramphenicol acetylt 98.1 7.7E-06 2.6E-10 77.2 9.5 17 395-411 55-71 (212)
161 2rij_A Putative 2,3,4,5-tetrah 98.1 3.1E-06 1.1E-10 86.5 7.1 27 435-462 297-323 (387)
162 3gue_A UTP-glucose-1-phosphate 98.1 0.00039 1.3E-08 72.9 23.0 343 64-448 76-481 (484)
163 4e8l_A Virginiamycin A acetylt 98.1 3.3E-06 1.1E-10 80.4 6.7 17 392-408 65-81 (219)
164 3nz2_A Hexapeptide-repeat cont 98.1 3.3E-06 1.1E-10 78.8 6.6 53 392-462 76-149 (195)
165 1mr7_A Streptogramin A acetylt 98.1 3.4E-06 1.2E-10 79.7 5.7 16 392-407 60-75 (209)
166 1xat_A Xenobiotic acetyltransf 97.9 1.4E-05 4.9E-10 75.5 7.5 17 391-407 55-71 (212)
167 4e8l_A Virginiamycin A acetylt 97.8 4.6E-05 1.6E-09 72.4 9.1 38 376-413 34-80 (219)
168 1xat_A Xenobiotic acetyltransf 97.5 0.00052 1.8E-08 64.7 10.5 15 397-411 55-69 (212)
169 1mr7_A Streptogramin A acetylt 97.2 0.00017 5.7E-09 68.0 3.7 37 376-412 29-74 (209)
170 3ogz_A UDP-sugar pyrophosphory 96.0 0.081 2.8E-06 57.0 14.1 165 64-240 114-320 (630)
171 2i5e_A Hypothetical protein MM 95.9 0.019 6.6E-07 53.4 8.1 105 63-205 2-111 (211)
172 3bcv_A Putative glycosyltransf 78.3 11 0.00038 34.2 9.9 106 89-216 10-118 (240)
173 1qg8_A Protein (spore coat pol 72.6 48 0.0016 30.1 12.8 100 89-210 6-116 (255)
174 1xhb_A Polypeptide N-acetylgal 56.5 89 0.003 31.7 12.2 103 90-212 35-144 (472)
175 3cgx_A Putative nucleotide-dip 52.1 77 0.0026 29.5 10.0 90 97-208 38-129 (242)
176 2d7i_A Polypeptide N-acetylgal 40.6 92 0.0032 32.8 9.5 102 89-211 117-225 (570)
177 2ffu_A Ppgalnact-2, polypeptid 35.8 2.6E+02 0.009 28.4 11.9 100 89-213 71-177 (501)
178 2z86_A Chondroitin synthase; G 31.0 2.3E+02 0.0077 29.8 10.7 100 89-210 380-482 (625)
179 2z86_A Chondroitin synthase; G 26.4 4.5E+02 0.015 27.4 12.1 103 89-212 98-204 (625)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=6.5e-60 Score=500.97 Aligned_cols=428 Identities=50% Similarity=0.944 Sum_probs=355.8
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCc-cc-C
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGT-NF-G 141 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~-~~-~ 141 (497)
.|+|||||||.|+||+|+|..+||||+||+|+||||+|++++|.++|+++|+|+++++.+++.+|+.+.| +... ++ .
T Consensus 20 ~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~-~~~~~~~~~ 98 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY-ASNMGGYKN 98 (451)
T ss_dssp HEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHC-C--------
T ss_pred ceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhh-hcccccccc
Confidence 5899999999999999999999999999999955999999999999999999999999889999986543 2110 01 1
Q ss_pred CCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 142 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 142 ~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
...++++...+.+ .+.+|.+||+++|+.+++++.+ ...++|||++||++++.++.++++.|+++++++|+++.+.
T Consensus 99 ~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~~~~---~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~ 173 (451)
T 1yp2_A 99 EGFVEVLAAQQSP--ENPDWFQGTADAVRQYLWLFEE---HTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPM 173 (451)
T ss_dssp CCEEEEEESCSST--TSCCCCCSHHHHHHHTHHHHTT---SCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEE
T ss_pred cCcEEEecccccc--cccccccCcHHHHHHHHHHHHh---cCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEc
Confidence 2236666544432 2345778999999999988852 1247899999999999999999999999999999998887
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCc
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 301 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d 301 (497)
+.+.+.+||++..|++++|+.|.|||..+....+.++.++++..+......++++++|+|+|++++|.++++..++...+
T Consensus 174 ~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~ 253 (451)
T 1yp2_A 174 DEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGAND 253 (451)
T ss_dssp CHHHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTCCC
T ss_pred ChhhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhcccccc
Confidence 53235689999999889999999999865434444555555433221112357899999999999987777766555567
Q ss_pred hhhhhHHhhhcc-CceEEEEeccEEEecCCHHHHHHHHHHhhcCC-CCccccCCCCCCCCCCccCCCeEEcCeEeeceEE
Q 010922 302 FGSEIIPAAIME-HDVQAYIFRDYWEDIGTIKSFYEANMALTKES-PAFHFYDPKTPFYTSPRFLPPTKIDNCRIKDAII 379 (497)
Q Consensus 302 ~~~~ii~~li~~-~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~~-~~~~~~~~~~~i~~~~~~~~~~~i~~~~i~~s~I 379 (497)
|..++++.++++ .++.+|.++++|.|+||+++|.+|+++++++. +...++++.+++++++.+.|+++|.+++|.++.|
T Consensus 254 ~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~I~~~~I 333 (451)
T 1yp2_A 254 FGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVI 333 (451)
T ss_dssp TTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEEEEEEEEEEEE
T ss_pred hHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEEcceEEeCeEE
Confidence 778899999887 78999999999999999999999999999876 6777899999999999999999998899999999
Q ss_pred CCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcE
Q 010922 380 SHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVV 459 (497)
Q Consensus 380 ~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~ 459 (497)
|++|+|+++.+.+|+||++|.|+++|.|.+++++++++++...+.......|.+.+.||+|+.|.+|+||+||.||+|++
T Consensus 334 g~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~ 413 (451)
T 1yp2_A 334 GEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGDNVK 413 (451)
T ss_dssp CTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECTTCE
T ss_pred CCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECCCCE
Confidence 99999998889999999999999999999999999988888777777777787778999999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 460 IVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 460 i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
|.+.+++...+.+++++.|++|.++||++++|++|++|
T Consensus 414 i~~~~~~~~~~~ig~~~~ig~~~v~Ig~~a~i~agsvv 451 (451)
T 1yp2_A 414 IINKDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII 451 (451)
T ss_dssp ECCSSCCSCEEEGGGTEEEETTEEEECTTCEECTTCBC
T ss_pred EeCCcccccCceeCCCEEEcCCEEEECCCcEECCCccC
Confidence 99999998777999999999998889999999999986
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.8e-52 Score=438.75 Aligned_cols=382 Identities=32% Similarity=0.517 Sum_probs=307.4
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
.|+|||||+|.|+||+|+|..+||+|+||+|+||||+|++++|.++|+++|+|+++++.+++.+|+.+.| +....+...
T Consensus 12 ~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~-~~~~~~~~~ 90 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGW-DFFRPERNE 90 (420)
T ss_dssp GEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHS-CCCCGGGTC
T ss_pred ceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhh-ccccccccC
Confidence 4799999999999999999999999999999955999999999999999999999999888988886433 210001112
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccCHHHHHHHHHHcCCCeEEEEeeeCC
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCAAVGE 223 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~dl~~ll~~h~~~~a~~tl~~~~~~~ 223 (497)
.++++...+.. ....|+.||+++|+.++.++.+ ...++|++++||+++..++.++++.|+++++++|+++.+.+.
T Consensus 91 ~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~l~~---~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~ 165 (420)
T 3brk_X 91 SFDILPASQRV--SETQWYEGTADAVYQNIDIIEP---YAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPR 165 (420)
T ss_dssp EEEEECCC---------CCCCHHHHHHTTHHHHHH---HCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEET
T ss_pred CEEEeCccccc--cCCccccCCHHHHHHHHHHHHh---cCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCc
Confidence 35666543310 1234778999999999988862 123689999999999999999999999999999999988754
Q ss_pred CCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC---CC
Q 010922 224 SRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT---SN 300 (497)
Q Consensus 224 ~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~---~~ 300 (497)
+.+..||++..|++|+|..|.|||..+... +. ...++++++|+|+|++++|.+++++..+. ..
T Consensus 166 ~~~~~~g~v~~d~~g~v~~~~ekp~~~~~~--~~------------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~ 231 (420)
T 3brk_X 166 MEATGFGVMHVNEKDEIIDFIEKPADPPGI--PG------------NEGFALASMGIYVFHTKFLMEAVRRDAADPTSSR 231 (420)
T ss_dssp TGGGGSEEEEECTTSBEEEEEESCSSCCCB--TT------------BTTEEEEEEEEEEEEHHHHHHHHTSSCCC-----
T ss_pred cccCcccEEEECCCCcEEEeEeCCCccccc--cc------------cccceEEeeeeEEEeHHHHHHHHHHhcccCCccc
Confidence 336689999999889999999998653210 00 01247899999999999987777654331 34
Q ss_pred chhhhhHHhhhccCceEEEEe-----------ccEEEecCCHHHHHHHHHHhhcCCCCccccCCCCCCCCCCccCCCeEE
Q 010922 301 DFGSEIIPAAIMEHDVQAYIF-----------RDYWEDIGTIKSFYEANMALTKESPAFHFYDPKTPFYTSPRFLPPTKI 369 (497)
Q Consensus 301 d~~~~ii~~li~~~~v~~~~~-----------~g~w~dIgt~~~y~~An~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i 369 (497)
+|..++++.+++++++++|.+ ++||.||||+++|++||+.++++.+...++.+.+++++.+.+.|+++|
T Consensus 232 ~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~~~i 311 (420)
T 3brk_X 232 DFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAKF 311 (420)
T ss_dssp -----CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCCCEE
T ss_pred cchHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCCcEE
Confidence 567789999998889999999 899999999999999999999988877788888899999999999999
Q ss_pred c------CeEeeceEECCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEe
Q 010922 370 D------NCRIKDAIISHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKI 443 (497)
Q Consensus 370 ~------~~~i~~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i 443 (497)
. ++.+.++.||++|+|.++.|.+|+||++|+|+++|.|.+++++++ +.||+|+.|
T Consensus 312 ~~~~~~~~~~i~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~-------------------~~i~~~~~i 372 (420)
T 3brk_X 312 VHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPS-------------------VKIGRHAQL 372 (420)
T ss_dssp ECBCSSCBCEEESCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTT-------------------CEECTTCEE
T ss_pred ecccccCCcEecCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCC-------------------CEECCCCEE
Confidence 5 578889999999999778999999999999999999999998887 999999999
Q ss_pred eceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEE-ccccEEEccCc
Q 010922 444 RNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYI-RSGITIIMEKA 489 (497)
Q Consensus 444 ~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i-~~g~~vi~~~~ 489 (497)
.+|+||+++.||++++|.+.. ..+.++++| .+|+++|.+++
T Consensus 373 ~~~~ig~~~~i~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~~~~ 414 (420)
T 3brk_X 373 SNVVIDHGVVIPEGLIVGEDP-----ELDAKRFRRTESGICLITQSM 414 (420)
T ss_dssp EEEEECTTCEECTTCEESSCH-----HHHHHHSEECTTSCEEECHHH
T ss_pred eceEECCCCEECCCCEEeCCC-----CCCCceEEEecCceEEEecch
Confidence 999999999999999998542 222235888 68887776654
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=1.3e-45 Score=396.48 Aligned_cols=393 Identities=18% Similarity=0.192 Sum_probs=282.0
Q ss_pred CCceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccC
Q 010922 62 PGVAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFG 141 (497)
Q Consensus 62 ~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~ 141 (497)
|..+.+||||||.||||+|+| ||||+||+|+ |||+|+|++|.++|+++|+|+++|+.+++++|+.+.. ..|+
T Consensus 10 ~~~~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~----~~~~ 81 (501)
T 3st8_A 10 PGDTAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELA----DTLG 81 (501)
T ss_dssp --CEEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHH----HHHT
T ss_pred CCCceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHH----HhcC
Confidence 567899999999999999976 9999999999 5999999999999999999999999999999996421 1222
Q ss_pred CCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee--ccCHHHHHHHHHHcCCCeEEEEe
Q 010922 142 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDRDADITISCA 219 (497)
Q Consensus 142 ~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~--~~dl~~ll~~h~~~~a~~tl~~~ 219 (497)
. .++++. | ++++|||+||+++++++.+ ...+++|+++||..+ ...+.+|++.|+++++++|++..
T Consensus 82 ~-~i~~~~--q-------~~~lGTa~Av~~a~~~l~~---~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~ 148 (501)
T 3st8_A 82 R-TIDVAL--Q-------DRPLGTGHAVLCGLSALPD---DYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTT 148 (501)
T ss_dssp S-CCEEEE--C-------SSCCCHHHHHHHHHTTSCT---TCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred C-cEEEEE--c-------CCCCCcHHHHHHHHHHhcc---ccccceeeecCcceeecHHHHHHHHHHHhhccccceEeee
Confidence 1 133332 2 1347999999999988863 235689999999744 45689999999999999999999
Q ss_pred eeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCC--
Q 010922 220 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP-- 297 (497)
Q Consensus 220 ~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~-- 297 (497)
++++ ++.||.+..|++|+|..|.|||+.+... ...+++++|+|+|++++|..+++....
T Consensus 149 ~~~d--p~~yG~i~~~~~g~v~~ivEk~~~~~~~-----------------~~i~~in~Giy~f~~~~l~~~l~~l~~~n 209 (501)
T 3st8_A 149 TLDD--PFGYGRILRTQDHEVMAIVEQTDATPSQ-----------------REIREVNAGVYAFDIAALRSALSRLSSNN 209 (501)
T ss_dssp ECSC--CTTSCEEEECTTCCEEEEECGGGCCHHH-----------------HHCCEEEEEEEEEEHHHHHHHHTTCCCCS
T ss_pred ccCC--chhccccccccceeEEeeccccCCChhh-----------------ccceeeeceeeeecchhHHHhhhhhcccc
Confidence 9887 6789999999999999999998764321 024789999999999999888776443
Q ss_pred -CCCchhhhhHHhhhcc-CceEEEEeccEEEecC--CHHHHHHHHHHhhcC-------------CCCccccCCCCCCCCC
Q 010922 298 -TSNDFGSEIIPAAIME-HDVQAYIFRDYWEDIG--TIKSFYEANMALTKE-------------SPAFHFYDPKTPFYTS 360 (497)
Q Consensus 298 -~~~d~~~~ii~~li~~-~~v~~~~~~g~w~dIg--t~~~y~~An~~l~~~-------------~~~~~~~~~~~~i~~~ 360 (497)
..+.+.++++..+... ..+.++....+|...+ +...+.++...+..+ .|...++++...+...
T Consensus 210 ~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~d 289 (501)
T 3st8_A 210 AQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRD 289 (501)
T ss_dssp TTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTT
T ss_pred cccccchhhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCc
Confidence 2445677888777665 5677777777766554 444444433322211 1222233333344444
Q ss_pred CccCCCeEEcC-e------------EeeceEECCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeC-CccccchhHH-H
Q 010922 361 PRFLPPTKIDN-C------------RIKDAIISHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLG-ADYYQTESEI-A 425 (497)
Q Consensus 361 ~~~~~~~~i~~-~------------~i~~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~-~~~~~~~~~~-~ 425 (497)
+.+.|++.+.+ + .+.++.++.++.+..+.+..+.+|+++.|++++.|...++++ +..++..+|+ +
T Consensus 290 v~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~ 369 (501)
T 3st8_A 290 TVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKN 369 (501)
T ss_dssp CEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEES
T ss_pred ceecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEcc
Confidence 44444444421 2 223333444444333344555666666666666665433333 3444555666 6
Q ss_pred HhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCCC-CCCCCCeEEccccEE-----EccCcEECCCccC
Q 010922 426 SLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEA-DRPELGFYIRSGITI-----IMEKATIEDGMVI 497 (497)
Q Consensus 426 ~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~~-~~~~~~~~i~~g~~v-----i~~~~~i~~g~~i 497 (497)
+.+++| +.|++.++|.+|+||+||.||+|+++.|.+++... +.+++++.|+++..+ ||++|+|++|++|
T Consensus 370 s~Ig~g---skI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v 444 (501)
T 3st8_A 370 STIGTG---TKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVV 444 (501)
T ss_dssp CEECTT---CEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred ceecCC---cEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEE
Confidence 667777 89999999999999999999999999999998754 788888888777653 7999999999875
No 4
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=1.4e-43 Score=376.85 Aligned_cols=382 Identities=17% Similarity=0.239 Sum_probs=275.2
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
-+|||||+|.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+++. . +
T Consensus 12 ~~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~-----~----~--- 75 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLA-----G----Q--- 75 (468)
T ss_dssp EEEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSS-----S----S---
T ss_pred CcEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhC-----C----C---
Confidence 4899999999999984 689999999999 6999999999999999999999998776655442 2 1
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
++++... +.+||+++|+.++.++++ ..+.||+++||+ +...++.++++.|.+.++++++++.+.+
T Consensus 76 i~~v~~~---------~~~G~~~sl~~a~~~~~~----~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~ 142 (468)
T 1hm9_A 76 TEFVTQS---------EQLGTGHAVMMTEPILEG----LSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETD 142 (468)
T ss_dssp SEEEECS---------SCCCHHHHHHTTHHHHTT----CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS
T ss_pred cEEEeCC---------ccCChHHHHHHHHHHhcc----CCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccC
Confidence 2333221 236999999999988851 247899999999 5678899999999999999999888876
Q ss_pred CCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC---C
Q 010922 223 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT---S 299 (497)
Q Consensus 223 ~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~---~ 299 (497)
+ +..|+.+..|++|+|..|.|||...... ..++++++|+|+|+++.|.+.+++..+. .
T Consensus 143 ~--~~~~g~v~~d~~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~ 203 (468)
T 1hm9_A 143 N--PFGYGRIVRNDNAEVLRIVEQKDATDFE-----------------KQIKEINTGTYVFDNERLFEALKNINTNNAQG 203 (468)
T ss_dssp C--CTTSCEEEECTTCCEEEEECTTTCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTC
T ss_pred C--CCceeEEEECCCCCEEEEEECCCCChHH-----------------hcCeEEEEEEEEEEHHHHHHHHHhhccccCCC
Confidence 6 5579999999889999999997532100 0247899999999999776666654332 2
Q ss_pred CchhhhhHHhhhcc-CceEEEEeccEEEe--cCCHHHHHHHHHHhhcCC------CCcc-------ccCCCCCCC-----
Q 010922 300 NDFGSEIIPAAIME-HDVQAYIFRDYWED--IGTIKSFYEANMALTKES------PAFH-------FYDPKTPFY----- 358 (497)
Q Consensus 300 ~d~~~~ii~~li~~-~~v~~~~~~g~w~d--Igt~~~y~~An~~l~~~~------~~~~-------~~~~~~~i~----- 358 (497)
..+.+++++.++++ .++++|.++++|.+ |+|+++|.+++..+..+. +... ++++.+.+.
T Consensus 204 ~~~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i 283 (468)
T 1hm9_A 204 EYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQI 283 (468)
T ss_dssp SCCTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEE
T ss_pred eEEHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEE
Confidence 34568899998886 58999999999977 559999999997654331 1111 122222222
Q ss_pred -C------CCccCCCeEEc-CeEeeceEECCCCEEcceEEeeeEEcCCcEECCCCEEc-ceEEeCCccccchhHH-HHhh
Q 010922 359 -T------SPRFLPPTKID-NCRIKDAIISHGCFLRECTVEHSIVGERSRLDYGVELK-DTVMLGADYYQTESEI-ASLL 428 (497)
Q Consensus 359 -~------~~~~~~~~~i~-~~~i~~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~-~s~i~~~~~~~~~~~~-~~~~ 428 (497)
+ .+.+++++.|. ++.|.++.||++|.|+++.+.+++||++|.|+++|.|. ++++..+..++..+++ .+.+
T Consensus 284 ~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~I 363 (468)
T 1hm9_A 284 EANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSI 363 (468)
T ss_dssp CSSCEEESSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEE
T ss_pred CCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEE
Confidence 2 22333333332 35555667777777776677788888888888888888 5555555555555554 3344
Q ss_pred cCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCC-CCCCCCCeEEccccEE-----EccCcEECCCccC
Q 010922 429 AEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQE-ADRPELGFYIRSGITI-----IMEKATIEDGMVI 497 (497)
Q Consensus 429 ~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~-~~~~~~~~~i~~g~~v-----i~~~~~i~~g~~i 497 (497)
+++ +.|++.+.+.+|+||+|+.||+++++.+.+++.. ...+++++.|+.+.+| ||++++|++|++|
T Consensus 364 g~~---~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~i~~~s~v 435 (468)
T 1hm9_A 364 GEN---TKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTI 435 (468)
T ss_dssp CTT---CEEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSCEECTTCEECTTCEE
T ss_pred cCC---cEeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEeCCcEECCCCEECCCCEE
Confidence 444 4555555556789999999999999988555443 3455556666555443 6888888888764
No 5
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=1.6e-42 Score=361.63 Aligned_cols=353 Identities=18% Similarity=0.264 Sum_probs=263.8
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
|+|||||+|.|+||+|+|..+||+|+|++|+ |||+|++++|.++|+++|+|++++. +.+++.+.+ . +
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~--~----~--- 67 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKL--K----E--- 67 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHC--T----T---
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccC--C----c---
Confidence 7899999999999999999999999999999 6999999999999999999999876 566664311 0 1
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeec--cCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYR--MDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~--~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
++++.... |.+|++++|+.+.. .++|++++||+++. .++.++++ .+++++++.+.+
T Consensus 68 i~~~~~~~--------~~~g~~~~l~~~~~---------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~ 125 (401)
T 2ggo_A 68 ISIVTQKD--------DIKGTGAAILSAKF---------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS 125 (401)
T ss_dssp CEEEECCT--------TCCBSTTTGGGCCC---------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS
T ss_pred EEEEeCCC--------CCCChHHHHHHhcc---------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC
Confidence 34443221 24689999877642 37899999999886 55666655 467888888876
Q ss_pred CCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC--CC
Q 010922 223 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT--SN 300 (497)
Q Consensus 223 ~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~--~~ 300 (497)
+ +..|+.+..|++|+|..|.|||..+ .++++++|+|+|++++|.. +++..+. ..
T Consensus 126 ~--~~~~~~v~~~~~g~v~~~~ek~~~~---------------------~~~~~~~Giy~~~~~~~~~-l~~~~~~~~~~ 181 (401)
T 2ggo_A 126 N--PKDYGVLVLDNQNNLSKIIEKPEIP---------------------PSNLINAGIYKLNSDIFTY-LDKISISERGE 181 (401)
T ss_dssp C--CSSSCEEEECTTSSEEEEECSCSSC---------------------SCSEEEEEEEEEETHHHHH-HHHSCCCSSSC
T ss_pred C--CcceeEEEECCCCeEEEEEECCCCC---------------------CCcEEEEEEEEEcHHHHHH-hhhcCcCCCCc
Confidence 5 4578888888889999999998643 2478999999999999864 5553321 12
Q ss_pred chhhhhHHhhhcc-CceEEEEeccEEEecCCHHHHHHHHHHhhcCCC--Cc-cccCCCCCCCCCCccCCCeEE-cCeEee
Q 010922 301 DFGSEIIPAAIME-HDVQAYIFRDYWEDIGTIKSFYEANMALTKESP--AF-HFYDPKTPFYTSPRFLPPTKI-DNCRIK 375 (497)
Q Consensus 301 d~~~~ii~~li~~-~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~~~--~~-~~~~~~~~i~~~~~~~~~~~i-~~~~i~ 375 (497)
....++++.+ .. .++.++..+++|.||+||+||.+|++.++++.. .. ..+++.+.+.+.+.+++++.| .++.|.
T Consensus 182 ~~~~~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~ 260 (401)
T 2ggo_A 182 LELTDAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIE 260 (401)
T ss_dssp BCHHHHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEE
T ss_pred eEHHHHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEe
Confidence 2245778777 54 689999999999999999999999999887643 11 123344444444445555555 245553
Q ss_pred -ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCC
Q 010922 376 -DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNV 452 (497)
Q Consensus 376 -~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~ 452 (497)
++.||++|.|+ ++.|. +++||++|.|+++|.|.+++++++ +.||+++.|.+|+||+++
T Consensus 261 ~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~-------------------~~i~~~~~i~~~~Ig~~~ 321 (401)
T 2ggo_A 261 GPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEG-------------------SKIPHLSYVGDSVIAEDV 321 (401)
T ss_dssp SSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTT-------------------CEEEESCEEESCEECTTC
T ss_pred CCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCC-------------------cEECCCceEcceEECCCc
Confidence 47788888887 45664 689999999999999988888777 899999999999999999
Q ss_pred EECCCcEEcC------------------------CCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 453 KIGKDVVIVN------------------------KDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 453 ~Ig~~~~i~~------------------------~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
.||++++|.+ ...+++...++.++.|..|++ ||++++|++|++|
T Consensus 322 ~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~-Ig~~~vi~~gsvv 389 (401)
T 2ggo_A 322 NFGAGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVK-IGAYARIYPGAVV 389 (401)
T ss_dssp EECTTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCE-ECTTCEECTTCEE
T ss_pred EECCCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcE-ECCCcEECCCCeE
Confidence 9999999984 222333444444444444433 5777777777764
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=9.1e-42 Score=361.55 Aligned_cols=380 Identities=14% Similarity=0.176 Sum_probs=267.3
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
.|.|||||+|.|+||.+ .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+.+.+++.+ ++
T Consensus 8 ~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~--------~~-- 73 (459)
T 4fce_A 8 SMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLAD--------PS-- 73 (459)
T ss_dssp CEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC--------------
T ss_pred cceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc--------CC--
Confidence 58999999999999986 789999999999 59999999999999999999999988777766631 12
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
++++... +..||+++++.++.++. ..+.|++++||+ +...++.++++.|.+ .++++++.+.
T Consensus 74 -~~~v~~~---------~~~g~~~~i~~~~~~~~-----~~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~ 136 (459)
T 4fce_A 74 -LNWVLQA---------EQLGTGHAMQQAAPHFA-----DDEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKL 136 (459)
T ss_dssp --CEEECS---------SCCCHHHHHHHHGGGSC-----TTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEEC
T ss_pred -cEEEeCC---------CCCCcHHHHHHHHHhcC-----CCCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEec
Confidence 3333321 23699999999987774 247899999999 567789999998865 5678877776
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCC---C
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP---T 298 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~---~ 298 (497)
.+ +..|+.+..| +|+|..|.|||...... ..++++++|+|+|+++.|.++++...+ .
T Consensus 137 ~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~ 196 (459)
T 4fce_A 137 DN--PSGYGRIVRE-NGDVVGIVEHKDASDAQ-----------------REINEINTGILVANGRDLKRWLSLLDNNNAQ 196 (459)
T ss_dssp SC--CTTSCEEEEE-TTEEEEEECGGGCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHHTCCCCSTT
T ss_pred CC--CCcccEEEeC-CCcEEEEEECCCCChHH-----------------hhccEEEEEEEEEEHHHHHHHHHHhCccccC
Confidence 65 5679988887 79999999997532110 124789999999999988777765432 2
Q ss_pred CCchhhhhHHhhhcc-CceEEEEeccEE--EecCCHHHHHHHHHHhhcCC-------------CCccccCCCCCCCCCCc
Q 010922 299 SNDFGSEIIPAAIME-HDVQAYIFRDYW--EDIGTIKSFYEANMALTKES-------------PAFHFYDPKTPFYTSPR 362 (497)
Q Consensus 299 ~~d~~~~ii~~li~~-~~v~~~~~~g~w--~dIgt~~~y~~An~~l~~~~-------------~~~~~~~~~~~i~~~~~ 362 (497)
...+.+++++.+++. .++.+|..++|| .+|+||+||..|+..+..+. |....+++...+..++.
T Consensus 197 ~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~~ 276 (459)
T 4fce_A 197 GEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDIT 276 (459)
T ss_dssp CSCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSCE
T ss_pred CcEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCcE
Confidence 344567888888776 689999999766 66999999999986554331 11111222222223333
Q ss_pred cCCCeE------------Ec-CeEeeceEECCCCEEc-ceEEeeeEEcCCcEECCCCEEc-ceEEeCCccccchhHH-HH
Q 010922 363 FLPPTK------------ID-NCRIKDAIISHGCFLR-ECTVEHSIVGERSRLDYGVELK-DTVMLGADYYQTESEI-AS 426 (497)
Q Consensus 363 ~~~~~~------------i~-~~~i~~s~I~~~~~i~-~~~v~~svIg~~~~i~~~~~i~-~s~i~~~~~~~~~~~~-~~ 426 (497)
+.|.+. |. ++.|.++.||++|.|+ ++.+.+++||++|.|+++|.|. ++.+.++..++..+++ .+
T Consensus 277 i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~~ 356 (459)
T 4fce_A 277 IDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKA 356 (459)
T ss_dssp ECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEEE
T ss_pred ECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEeee
Confidence 333333 21 3444556666677776 4666667777777777777776 4444444444555554 34
Q ss_pred hhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCC-CCCCCCCeEEccccEE-----EccCcEECCCccC
Q 010922 427 LLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQE-ADRPELGFYIRSGITI-----IMEKATIEDGMVI 497 (497)
Q Consensus 427 ~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~-~~~~~~~~~i~~g~~v-----i~~~~~i~~g~~i 497 (497)
.+.++ +.|++++.+.+|+||+++.||+++++.+.+++.. ...+++++.|+.+.+| ||++++|++|++|
T Consensus 357 ~i~~~---~~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV 430 (459)
T 4fce_A 357 RLGKG---SKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTV 430 (459)
T ss_dssp EECTT---CEEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred EEcCC---CEECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCCEE
Confidence 44444 5566666667789999999999999998766654 3566666666655543 6788888877764
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=4.3e-40 Score=348.45 Aligned_cols=380 Identities=18% Similarity=0.223 Sum_probs=253.9
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
.|.|||||+|.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|++++..+++.+++.+ + +
T Consensus 5 ~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~-~-------~-- 70 (456)
T 2v0h_A 5 ALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLAN-E-------Q-- 70 (456)
T ss_dssp CEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTT-C-------C--
T ss_pred cceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhc-C-------C--
Confidence 47899999999999984 689999999999 69999999999999999999999987777666631 1 1
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
++++... +..||+++++.++.+++ ..+.|++++||+ +...++.++++.|.+ +++++++.+.
T Consensus 71 -~~~v~~~---------~~~g~~~~~~~~~~~~~-----~~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~ 133 (456)
T 2v0h_A 71 -VNWVLQT---------EQLGTAHAVQQAAPFFK-----DNENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNL 133 (456)
T ss_dssp -CEEEECS---------CCCCHHHHHHHHGGGCC-----TTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEEC
T ss_pred -cEEEeCC---------CCCCcHHHHHHHHHhcC-----CCCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeec
Confidence 3333221 23699999999987764 147899999999 556789999998876 6788888776
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC---
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT--- 298 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~--- 298 (497)
++ +..|+.+..| +|+|..|.|||...... ...+++++|+|+|+++.|.+.++...+.
T Consensus 134 ~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~ 193 (456)
T 2v0h_A 134 DN--PTGYGRIIRE-NGNVVAIVEQKDANAEQ-----------------LNIKEVNTGVMVSDGASFKKWLARVGNNNAQ 193 (456)
T ss_dssp SS--CTTSCEEEEE-TTEEEEEECTTTCCHHH-----------------HTCCEEEEEEEEEEHHHHHHHHTTCCCCSTT
T ss_pred CC--CCccceEEEc-CCcEEEEEECCCCChhH-----------------hcCcEEEEEEEEEEHHHHHHHHHHhcccccc
Confidence 65 4568988887 78999999987632100 0247889999999999876677653322
Q ss_pred CCchhhhhHHhhhcc-CceEEEEeccE--EEecCCHHHHHHHHHHhhcCC------CCccccCC-CCCCCCCCccCCCeE
Q 010922 299 SNDFGSEIIPAAIME-HDVQAYIFRDY--WEDIGTIKSFYEANMALTKES------PAFHFYDP-KTPFYTSPRFLPPTK 368 (497)
Q Consensus 299 ~~d~~~~ii~~li~~-~~v~~~~~~g~--w~dIgt~~~y~~An~~l~~~~------~~~~~~~~-~~~i~~~~~~~~~~~ 368 (497)
...+.+++++.+++. .++.+|..+++ |.+|+||+||.+|+..+..+. +...+++| .+.+.+.+.+++++.
T Consensus 194 ~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~ 273 (456)
T 2v0h_A 194 GEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVE 273 (456)
T ss_dssp CCCCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCE
T ss_pred ccEEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCE
Confidence 234567888887776 57999998765 569999999999998665431 11112333 122333334444444
Q ss_pred Ec-CeEe-eceEECCCCEEc-ceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHH--HHhhcCCCcceEe------
Q 010922 369 ID-NCRI-KDAIISHGCFLR-ECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEI--ASLLAEGKVPIGV------ 437 (497)
Q Consensus 369 i~-~~~i-~~s~I~~~~~i~-~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~--~~~~~~~~~~~~I------ 437 (497)
|. ++.| .++.||++|.|+ ++.|.+++||++|.|+++|.|.++.+..+..++..+-+ .+.++++ +.|
T Consensus 274 I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~---~~ig~~~~i 350 (456)
T 2v0h_A 274 IDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAE---THVGNFVEI 350 (456)
T ss_dssp ECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTT---CEEEEEEEE
T ss_pred EcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCC---CEECCCCEE
Confidence 43 2444 245666666666 45566666666666666666655444333322222221 1111111 222
Q ss_pred -----CCCcEe------eceEEcCCCEECCCcEEcCCCCCCC-CCCCCCCeEEccccE-----EEccCcEECCCccC
Q 010922 438 -----GRNTKI------RNCIIDKNVKIGKDVVIVNKDDVQE-ADRPELGFYIRSGIT-----IIMEKATIEDGMVI 497 (497)
Q Consensus 438 -----g~~~~i------~~~iI~~~~~Ig~~~~i~~~~~v~~-~~~~~~~~~i~~g~~-----vi~~~~~i~~g~~i 497 (497)
++++++ .++.||+||.||+++++.+.+++.. ...+++++.|+.+.+ .||++++|++|++|
T Consensus 351 ~~~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s~v 427 (456)
T 2v0h_A 351 KKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTI 427 (456)
T ss_dssp ESCEECTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTTCEE
T ss_pred eccEECCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCCEE
Confidence 222222 3468899999999999887554332 344555555544443 36888888888764
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=3.1e-35 Score=292.50 Aligned_cols=243 Identities=16% Similarity=0.233 Sum_probs=195.8
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcc-cCCCcc---
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTY-FGNGTN--- 139 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y-~~~g~~--- 139 (497)
.|+|||||+|.|+||+|+|..+||||+||+|+ |||+|+|+++.++|+++|+|++++..+++.+|+.+.+ +.....
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~ 80 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN 80 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CC
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhccc
Confidence 37999999999999999999999999999999 6999999999999999999999999998988875322 110000
Q ss_pred ------------cCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-----HHH
Q 010922 140 ------------FGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-----YMD 202 (497)
Q Consensus 140 ------------~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-----l~~ 202 (497)
++. .+.++. + .+..||+++|+++..++. .++|+|++||++++.+ +.+
T Consensus 81 ~~~~~~~~~~~~~~~-~i~~~~--~-------~~~~Gt~~al~~a~~~l~------~~~~lv~~~D~~~~~~~~~~~l~~ 144 (281)
T 3juk_A 81 KENALKSIRNIIEKC-CFSYVR--Q-------KQMKGLGHAILTGEALIG------NEPFAVILADDLCISHDHPSVLKQ 144 (281)
T ss_dssp HHHHHHHHHHHHHHC-EEEEEE--C-------SSCCCHHHHHHHTHHHHC------SSCEEEECTTEEEECTTSCCHHHH
T ss_pred chhhhhhhhccccCc-cEEEEe--c-------CCCCCcHHHHHHHHHHcC------CCCEEEEeCCeeccCccchHHHHH
Confidence 121 233232 1 124799999999998885 3789999999999998 999
Q ss_pred HHHHHHHcCCCeEEEEeeeCCCCCCcceEEEECC--CC--CEEEEeecCCccccccccccccccCCCccccccCCcccee
Q 010922 203 FIQSHVDRDADITISCAAVGESRASDYGLVKIDN--MG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASM 278 (497)
Q Consensus 203 ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d~--~g--~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 278 (497)
+++.|.++++ .++++..++.+.+.+||++..|+ +| +|..|.|||..... .++++++
T Consensus 145 l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~-------------------~~~~~~~ 204 (281)
T 3juk_A 145 MTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA-------------------PSNLAVI 204 (281)
T ss_dssp HHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCC-------------------CcceeEE
Confidence 9999998887 77877777544477899999986 78 99999999974321 2478899
Q ss_pred eEEEEcHHHHHHHHhhhCCC--CCchhhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHhhcC
Q 010922 279 GVYVFKKDVLFKLLRWRYPT--SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKE 344 (497)
Q Consensus 279 Giyif~~~vL~~ll~~~~~~--~~d~~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~ 344 (497)
|+|+|++++|. .++...++ ......++++.+++++++.+|.++++|.|||||++|++|++.+++.
T Consensus 205 GiYi~~~~~l~-~l~~~~~~~~~e~~l~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 205 GRYILTPDIFE-ILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp EEEEECTTHHH-HHHTCCCCGGGSCCHHHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHH-HHHhcCCCCCCceeHHHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 99999999985 55554321 2233588999999888999999999999999999999999998864
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=1.6e-33 Score=278.74 Aligned_cols=238 Identities=15% Similarity=0.245 Sum_probs=194.5
Q ss_pred CCCceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccCh-hHHHHHHHhcccCCCcc
Q 010922 61 KPGVAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNS-ASLNRHIARTYFGNGTN 139 (497)
Q Consensus 61 ~~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~-~~l~~~l~~~y~~~g~~ 139 (497)
.++.|+|||||+|.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++.. +++.+++. .+..
T Consensus 21 ~~~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~-----~~~~ 94 (269)
T 4ecm_A 21 QSNAMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLG-----SGQE 94 (269)
T ss_dssp ---CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHT-----TSGG
T ss_pred cccCcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHh-----hccc
Confidence 44579999999999999999999999999999999 59999999999999999999999764 66766663 2334
Q ss_pred cCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccCHHHHHHHHHHcCCCeEEEEe
Q 010922 140 FGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCA 219 (497)
Q Consensus 140 ~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~dl~~ll~~h~~~~a~~tl~~~ 219 (497)
|+.. +.++... +..||+++|+.+..+++ .++|+|++||++++.++.++++.|.++++++++++.
T Consensus 95 ~~~~-i~~~~~~---------~~~G~~~al~~a~~~~~------~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~ 158 (269)
T 4ecm_A 95 FGVS-FTYRVQD---------KAGGIAQALGLCEDFVG------NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQ 158 (269)
T ss_dssp GTCE-EEEEECS---------SCCCHHHHHHTTHHHHT------TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEE
T ss_pred cCce-EEEeeCC---------ccCcHHHHHHHHHHhcC------CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEE
Confidence 5422 2222211 23699999999988885 379999999999999999999999999999999998
Q ss_pred eeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCC--
Q 010922 220 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP-- 297 (497)
Q Consensus 220 ~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~-- 297 (497)
+.++ +..||++..|+ |+|..|.|||..+. ++++++|+|+|++++|. .+++..+
T Consensus 159 ~~~~--~~~~g~v~~d~-g~v~~~~ekp~~~~---------------------~~~~~~Giy~~~~~~l~-~l~~~~~~~ 213 (269)
T 4ecm_A 159 SVDD--PERFGVANIQN-RKIIEIEEKPKEPK---------------------SSYAVTGIYLYDSKVFS-YIKELKPSA 213 (269)
T ss_dssp ECSC--GGGSEEEEEET-TEEEEEEESCSSCS---------------------CSEEEEEEEEECTTHHH-HHTSCCBCT
T ss_pred ECCC--CCCceEEEEcC-CEEEEEEECCCCCC---------------------CcEEEEEEEEECHHHHH-hhhhcCCCC
Confidence 8776 56799999884 99999999986432 37899999999999885 4554332
Q ss_pred CCCchhhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHhhcCC
Q 010922 298 TSNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKES 345 (497)
Q Consensus 298 ~~~d~~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~~ 345 (497)
....+..++++.+++++++.+|.++++|.|||||++|.+|++.+.+..
T Consensus 214 ~ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~ 261 (269)
T 4ecm_A 214 RGELEITDINNWYLKRGVLTYNEMSGWWTDAGTHVSLQRANALARDIN 261 (269)
T ss_dssp TSCBCHHHHHHHHHHTTCEEEEECCSCEEECSSHHHHHHHHHHTTTCC
T ss_pred CCeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCHHHHHHHHHHHHhcc
Confidence 222346789999998889999999999999999999999999987643
No 10
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=1.1e-32 Score=276.91 Aligned_cols=245 Identities=20% Similarity=0.246 Sum_probs=191.7
Q ss_pred CceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcc-cC-----C
Q 010922 63 GVAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTY-FG-----N 136 (497)
Q Consensus 63 ~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y-~~-----~ 136 (497)
.+|+|||||+|.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+.| +. .
T Consensus 7 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 85 (302)
T 2e3d_A 7 KVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKR 85 (302)
T ss_dssp SCCEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC--
T ss_pred cccEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhhhc
Confidence 378999999999999999999999999999999 6999999999999999999999998888988885322 00 0
Q ss_pred Cc-----------ccCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeecc-------
Q 010922 137 GT-----------NFGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRM------- 198 (497)
Q Consensus 137 g~-----------~~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~------- 198 (497)
+. .++. .+.++... +..||+++|+++..++. .++|+|++||++++.
T Consensus 86 ~~~~~l~~~~~~~~~~~-~i~~~~~~---------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~~~~ 149 (302)
T 2e3d_A 86 VKRQLLDEVQSICPPHV-TIMQVRQG---------LAKGLGHAVLCAHPVVG------DEPVAVILPDVILDEYESDLSQ 149 (302)
T ss_dssp --CHHHHHHHHTSCTTC-EEEEEECS---------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEECTTSSCTTT
T ss_pred cchhhhhhhhhccccCc-ceEEeeCC---------ccCCHHHHHHHHHHHcC------CCcEEEEcCCccccCccccchH
Confidence 00 0121 23333221 23799999999998885 278999999999973
Q ss_pred -CHHHHHHHHHHcCCCeEEEEeeeCCCCCCcceEEEEC----CCC---CEEEEeecCCccccccccccccccCCCccccc
Q 010922 199 -DYMDFIQSHVDRDADITISCAAVGESRASDYGLVKID----NMG---RIAQFAEKPSGANLKAMQVDTSLLGFSPQEAR 270 (497)
Q Consensus 199 -dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d----~~g---~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~ 270 (497)
++.++++.|.++++ +++++.+.++ ++.||++..+ ++| +|..|.|||.....
T Consensus 150 ~~l~~l~~~~~~~~~-~~i~~~~~~~--~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~------------------ 208 (302)
T 2e3d_A 150 DNLAEMIRRFDETGH-SQIMVEPVAD--VTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA------------------ 208 (302)
T ss_dssp STHHHHHHHHHHHCC-EEEEEEECSC--GGGSEEEECTTCCCCTTCEEEECEEEESCCTTTC------------------
T ss_pred HHHHHHHHHHHhcCC-cEEEEEEccC--CCCccEEEecccccCCCCceeEEEEEECCCCCcc------------------
Confidence 79999999988777 7777777644 5689998874 457 89999999864211
Q ss_pred cCCccceeeEEEEcHHHHHHHHhhhCCC--CCchhhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHhhcCCCC
Q 010922 271 KCPYVASMGVYVFKKDVLFKLLRWRYPT--SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKESPA 347 (497)
Q Consensus 271 ~~~~l~~~Giyif~~~vL~~ll~~~~~~--~~d~~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~~~~ 347 (497)
.++++++|+|+|++++|. .++...++ ...+..++++.+++++++.+|.++++|.|||||++|.+|++.++.+.+.
T Consensus 209 -~~~~~~~Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~~~~ 285 (302)
T 2e3d_A 209 -PSNLAIVGRYVLSADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNT 285 (302)
T ss_dssp -SCSEEEEEEEEECTTHHH-HHTCCCC----CCCHHHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHHHHCTT
T ss_pred -ccceEEEEEEEECHHHHH-HHHhhCCCCCCceehHHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhcCcc
Confidence 247899999999999885 45554332 2234578888888778999999999999999999999999877655443
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=1.1e-32 Score=276.49 Aligned_cols=247 Identities=17% Similarity=0.210 Sum_probs=174.4
Q ss_pred CceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcc-c-----CC
Q 010922 63 GVAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTY-F-----GN 136 (497)
Q Consensus 63 ~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y-~-----~~ 136 (497)
..|+|||||||.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+.| + ..
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 91 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAAR 91 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTT
T ss_pred CccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhhc
Confidence 358999999999999999999999999999999 6999999999999999999999998888888874311 0 00
Q ss_pred C---------cccCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeec---cCHHHHH
Q 010922 137 G---------TNFGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYR---MDYMDFI 204 (497)
Q Consensus 137 g---------~~~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~---~dl~~ll 204 (497)
+ ..++. .+.++... +..||+++|+.+..++. .++|+|++||++++ .++.+++
T Consensus 92 ~~~~~~~~~~~~~g~-~i~~~~~~---------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~l~~l~ 155 (297)
T 2ux8_A 92 GKSLDVLDGTRLKPG-NIAYVRQQ---------EPMGLGHAVWCARDIVG------DEPFAVLLPDDFMFGQPGCLKQMV 155 (297)
T ss_dssp TCCGGGGTTSCCSTT-SEEEEECC---------SCCCHHHHHHTTHHHHC------SSCEEEECTTEEEESSSCHHHHHH
T ss_pred cchhhhhhhcccCCC-ceEEEeCC---------CCCChHHHHHHHHHHcC------CCcEEEEeCCeecCCChHHHHHHH
Confidence 0 00121 24443321 23799999999998885 37899999999987 5799999
Q ss_pred HHHHHcCCCeEEEEeeeCCCCCCcceEEEECC--CC--CEEEEeecCCccccccccccccccCCCccccccCCccceeeE
Q 010922 205 QSHVDRDADITISCAAVGESRASDYGLVKIDN--MG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGV 280 (497)
Q Consensus 205 ~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d~--~g--~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 280 (497)
+.|.+.++ .++++.+.+...+..||++..|+ +| +|..|.|||..... .++++++|+
T Consensus 156 ~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~-------------------~~~~~~~Gi 215 (297)
T 2ux8_A 156 DAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTA-------------------PSNLSVIGR 215 (297)
T ss_dssp HHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC---------------------------------CCCEEEE
T ss_pred HHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCC-------------------CccEEEEEE
Confidence 99988776 67777665433356799887663 45 89999999864211 236889999
Q ss_pred EEEcHHHHHHHHhhhCCC--CCchhhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHhhcCCCC
Q 010922 281 YVFKKDVLFKLLRWRYPT--SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKESPA 347 (497)
Q Consensus 281 yif~~~vL~~ll~~~~~~--~~d~~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~~~~ 347 (497)
|+|++++|. .++...++ ...+..++++.+++++++.+|.++++|.|||||++|.+|++.++.+.+.
T Consensus 216 yi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~~~ 283 (297)
T 2ux8_A 216 YILQPEVMR-ILENQGKGAGGEIQLTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSRPD 283 (297)
T ss_dssp EEECTHHHH-HHHHTC--------CCTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHHHHCTT
T ss_pred EEECHHHHH-HHHhhCCCCCCeeEHHHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHHhcChh
Confidence 999999875 45554332 1223467888888888999999999999999999999999888866553
No 12
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=100.00 E-value=7.7e-32 Score=264.01 Aligned_cols=243 Identities=16% Similarity=0.231 Sum_probs=179.0
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhccc-CCCccc--C
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYF-GNGTNF--G 141 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~-~~g~~~--~ 141 (497)
|+|||||+|.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+.+.+|+.+.+. ..+..+ +
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 81 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMA 81 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEGG
T ss_pred cEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhccccccccccccc
Confidence 7899999999999999999999999999999 59999999999999999999999998888888853210 011111 0
Q ss_pred CCeEEEeeCccCCCC---CCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccCHHHHHHHHHHcCCCeEEEE
Q 010922 142 DGFVEVLAATQTPGE---SGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISC 218 (497)
Q Consensus 142 ~~~VeIl~~~~~~~e---~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~dl~~ll~~h~~~~a~~tl~~ 218 (497)
...++++.+...+-+ ..+....||+++|+.++.++. ..++|++++||+++..++.++++.|.++++++|+..
T Consensus 82 ~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~-----~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~ 156 (259)
T 1tzf_A 82 ENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVK-----DDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTA 156 (259)
T ss_dssp GTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTT-----TSSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEE
T ss_pred ccceeeeeccccccceeeeecccccCcHHHHHHHHHhcC-----CCCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEE
Confidence 001223211000000 000113699999999987773 237899999999999999999999998888887754
Q ss_pred eeeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC
Q 010922 219 AAVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT 298 (497)
Q Consensus 219 ~~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~ 298 (497)
. .+ ++.||.+..| +|+|..|.|||..+ .+++++|+|+|++++|. .++. .
T Consensus 157 ~--~~--~~~~g~v~~~-~g~v~~~~ekp~~~----------------------~~~~~~Giy~~~~~~l~-~l~~---~ 205 (259)
T 1tzf_A 157 T--FP--PGRFGALDIQ-AGQVRSFQEKPKGD----------------------GAMINGGFFVLNPSVID-LIDN---D 205 (259)
T ss_dssp E--CC--CCCSEEEEEE-TTEEEEEEESCSCC----------------------SCCEECCCEEECGGGGG-GCCS---T
T ss_pred e--cC--CCCccEEEEc-CCEEEEEEecCCCC----------------------CceEEEEEEEeCHHHHH-hhcc---c
Confidence 3 22 4579988888 79999999998642 25789999999999884 3322 2
Q ss_pred CCchhhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHhhcC
Q 010922 299 SNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKE 344 (497)
Q Consensus 299 ~~d~~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~ 344 (497)
..+|..++++.+++++++.+|.++++|.||||+++|.++++.+.+.
T Consensus 206 ~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~ 251 (259)
T 1tzf_A 206 ATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEKG 251 (259)
T ss_dssp TCCTTTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhcC
Confidence 2355678888888888999999999999999999999999988764
No 13
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.98 E-value=1.4e-31 Score=271.97 Aligned_cols=250 Identities=19% Similarity=0.228 Sum_probs=189.6
Q ss_pred CCceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcc-cC-----
Q 010922 62 PGVAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTY-FG----- 135 (497)
Q Consensus 62 ~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y-~~----- 135 (497)
+.+|+|||||+|.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+|+...+ |.
T Consensus 10 ~~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~ 88 (323)
T 2pa4_A 10 NAVKTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLME 88 (323)
T ss_dssp --CCEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHH
T ss_pred hcceEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhc
Confidence 3469999999999999999999999999999999 6999999999999999999999998888877763211 00
Q ss_pred CC----------cccCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeec--cCHHHH
Q 010922 136 NG----------TNFGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYR--MDYMDF 203 (497)
Q Consensus 136 ~g----------~~~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~--~dl~~l 203 (497)
.+ ..++. .+.++... +..||+++|+.+..++.+ ..+.|+|++||++++ .++.++
T Consensus 89 ~~~~~~~~~~~~~~~g~-~i~~~~~~---------~~~Gt~~al~~a~~~l~~----~~d~~lv~~~D~~~~~~~~l~~l 154 (323)
T 2pa4_A 89 RGKTDQVEIIRRAADLI-KAVPVTQD---------KPLGLGHAVGLAESVLDD----DEDVVAVMLPDDLVLPTGVMERM 154 (323)
T ss_dssp TTCHHHHHHTTHHHHHC-EEEEEECS---------SCCCHHHHHHTTGGGSCS----SCCEEEEECTTEEEESSCHHHHH
T ss_pred cchhhhhhhhhccccCc-ceEEEeCC---------ccCCcHHHHHHHHHHhcC----CCCeEEEEeCCcccCchHHHHHH
Confidence 00 00111 23333211 236999999999877641 112399999999997 679999
Q ss_pred HHHHHHcCCCeEEEEeeeCCCCCCcceEEEEC----CCC--CEEEEeecCCccccccccccccccCCCccccccCCccce
Q 010922 204 IQSHVDRDADITISCAAVGESRASDYGLVKID----NMG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVAS 277 (497)
Q Consensus 204 l~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d----~~g--~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 277 (497)
++.|.+.++ .++++.+++.+..+.||++..| +++ +|..|.|||..... .+++++
T Consensus 155 ~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-------------------~~~~~~ 214 (323)
T 2pa4_A 155 AQVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDA-------------------PSRLAA 214 (323)
T ss_dssp HHHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTC-------------------SCSEEE
T ss_pred HHHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccc-------------------cccEEE
Confidence 999987765 5777766643335689999887 554 99999999864221 246889
Q ss_pred eeEEEEcHHHHHHHHhhhCCC--CCchhhhhHHhhhcc-CceEEEEeccEEEecCCHHHHHHHHHHhhcCCCC
Q 010922 278 MGVYVFKKDVLFKLLRWRYPT--SNDFGSEIIPAAIME-HDVQAYIFRDYWEDIGTIKSFYEANMALTKESPA 347 (497)
Q Consensus 278 ~Giyif~~~vL~~ll~~~~~~--~~d~~~~ii~~li~~-~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~~~~ 347 (497)
+|+|+|++++|. .++...++ ...+..++++.++++ .++.+|.++++|.|||||++|.+|++.++...+.
T Consensus 215 ~GiY~~~~~~~~-~l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~~~ 286 (323)
T 2pa4_A 215 TGRYLLDRKIFD-ALRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSHPV 286 (323)
T ss_dssp EEEEEEETHHHH-HHHHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTCTT
T ss_pred EEEEEECHHHHH-HHHhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcChh
Confidence 999999999886 45554332 122347889998887 7899999999999999999999999888866543
No 14
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.97 E-value=2.1e-31 Score=261.87 Aligned_cols=228 Identities=11% Similarity=0.083 Sum_probs=171.9
Q ss_pred EEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHh-cCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCeE
Q 010922 67 AVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCIN-SGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGFV 145 (497)
Q Consensus 67 aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~-~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~V 145 (497)
+||||||.||||+|+|..+||||+||+|+ |||+|+|++|.+ +|+++|+|++++..+ +.+++.+.. . .++...+
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~-~---~~~~~~~ 75 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKA-T---QLGIKQF 75 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHH-H---HHTCSSE
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHH-H---HcCCCCc
Confidence 79999999999999999999999999999 699999999999 799999999999876 555554322 0 1221112
Q ss_pred EEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee-ccCHHHHHHHHHHcCCCeEEEEeeeCCC
Q 010922 146 EVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAVGES 224 (497)
Q Consensus 146 eIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~-~~dl~~ll~~h~~~~a~~tl~~~~~~~~ 224 (497)
.++..+. +.+||++||+++.+++........++|+|++||+++ +.++.++ .++++.++++.++++
T Consensus 76 ~~~~~~~--------~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~~- 141 (255)
T 4evw_A 76 YIAELHT--------ETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGGG- 141 (255)
T ss_dssp EEEEESS--------CCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECCS-
T ss_pred eEEEeCC--------CCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecCC-
Confidence 2221111 237999999999998830000134789999999998 5566543 356778999988876
Q ss_pred CCCcceEEEECCCC--CEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHH-HHHHHHh----hhCC
Q 010922 225 RASDYGLVKIDNMG--RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKD-VLFKLLR----WRYP 297 (497)
Q Consensus 225 ~~~~~g~v~~d~~g--~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~-vL~~ll~----~~~~ 297 (497)
+ .||++..|++| +|++|.||+.. ++++++|+|+|++. .|.+.+. ...+
T Consensus 142 -p-~yG~v~~d~~g~~~V~~i~EK~~~-----------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~ 196 (255)
T 4evw_A 142 -D-NWSFAKPEHAGSTKVIQTAEKNPI-----------------------SDLCSTGLYHFNRKEDYLEAYREYVARPSQ 196 (255)
T ss_dssp -S-CSCEEEESSTTCCBEEEEESSSCS-----------------------SSEEEEEEEEESCHHHHHHHHHHHHTSCGG
T ss_pred -C-ceeEEEECCCCCeEEEEEEeccCc-----------------------cCcEEEeEEEECcHHHHHHHHHHHHhcccc
Confidence 3 79999999888 99999999432 36899999999986 3433332 2211
Q ss_pred ---CCCchhhhhHHhhhcc-CceEEEEec-cEEEecCCHHHHHHHHH
Q 010922 298 ---TSNDFGSEIIPAAIME-HDVQAYIFR-DYWEDIGTIKSFYEANM 339 (497)
Q Consensus 298 ---~~~d~~~~ii~~li~~-~~v~~~~~~-g~w~dIgt~~~y~~An~ 339 (497)
..+.+.+++++.++++ .++.+|.++ ++|.|||||++|.++..
T Consensus 197 ~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~ 243 (255)
T 4evw_A 197 EWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLR 243 (255)
T ss_dssp GCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHH
T ss_pred cccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHh
Confidence 3455678999999877 579999985 99999999999998864
No 15
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.97 E-value=5.1e-30 Score=257.25 Aligned_cols=233 Identities=18% Similarity=0.261 Sum_probs=186.0
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcc-cChhHHHHHHHhcccCCCcccCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQ-FNSASLNRHIARTYFGNGTNFGD 142 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~-~~~~~l~~~l~~~y~~~g~~~~~ 142 (497)
+|+|||||+|.|+||+|+|..+||+|+||+|+ |||+|+++.+..+|+++|+|+++ +..+.+.+++. .+..|+.
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~-----~g~~~g~ 76 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLG-----DGSQFGV 76 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHT-----TSGGGTS
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhh-----hccccCc
Confidence 58999999999999999999999999999999 69999999999999999999886 56677777773 3334553
Q ss_pred CeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee-ccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 143 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 143 ~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~-~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
. +.++. +. .+.|++++++.+..++. .++++++.||+++ +.++.++++.|.+.+.++++++.++
T Consensus 77 ~-i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v 140 (295)
T 1lvw_A 77 R-FSYRV--QE-------EPRGIADAFIVGKDFIG------DSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYV 140 (295)
T ss_dssp E-EEEEE--CS-------SCCCGGGHHHHTHHHHT------TSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEEC
T ss_pred e-EEEee--CC-------CCCChHHHHHHHHHHhC------CCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEEC
Confidence 2 33332 11 13699999999998885 2678888899865 6799999999987777888888887
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC--C
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT--S 299 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~--~ 299 (497)
.+ +.+||++..|++|+|..|.|||..+. ++++++|+|+|+++++.. ++...+. .
T Consensus 141 ~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~f~~~~l~~-~~~~~~~~~g 196 (295)
T 1lvw_A 141 RD--PRPFGVVEFDSEGRVISIEEKPSRPK---------------------SNYVVPGLYFYDNQVVEI-ARRIEPSDRG 196 (295)
T ss_dssp SC--CTTSEEEEECTTSBEEEEEESCSSCS---------------------CSEECCSEEEECTTHHHH-HHHCCCCTTS
T ss_pred CC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEeEEEcHHHHHH-HHhcCCcccC
Confidence 76 45799999999999999999986432 368899999999999864 4443332 1
Q ss_pred CchhhhhHHhhhccCceEEEEec-cE-EEecCCHHHHHHHHHHhh
Q 010922 300 NDFGSEIIPAAIMEHDVQAYIFR-DY-WEDIGTIKSFYEANMALT 342 (497)
Q Consensus 300 ~d~~~~ii~~li~~~~v~~~~~~-g~-w~dIgt~~~y~~An~~l~ 342 (497)
....+++++.+++++++.++.+. +| |.||||+++|.+|+..+.
T Consensus 197 e~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 197 ELEITSVNEEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred ceeHHHHHHHHHHcCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 22347788888888888888775 75 999999999999997654
No 16
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.97 E-value=6.8e-31 Score=264.58 Aligned_cols=255 Identities=14% Similarity=0.136 Sum_probs=186.6
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccc--cCcccchhHhHHHHHhcCCcEEEEEcccCh-hHHHHHHHhcccCCCccc
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPV--AGCYRLIDIPMSNCINSGINKIFVLTQFNS-ASLNRHIARTYFGNGTNF 140 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI--~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~-~~l~~~l~~~y~~~g~~~ 140 (497)
.|.|||||||.|+||+| ||+|+|| +|+ |||+|+++++.++|+++|+|++++.. +.+.+|+...+ .|
T Consensus 5 ~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~-----~~ 73 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKY-----EG 73 (303)
T ss_dssp CCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHH-----TT
T ss_pred ceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHh-----cc
Confidence 36899999999999998 7999999 599 69999999999999999999999985 78888886432 12
Q ss_pred CCCeEEEeeCcc-C-CC----CCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-HHHHHHHHHH---c
Q 010922 141 GDGFVEVLAATQ-T-PG----ESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVD---R 210 (497)
Q Consensus 141 ~~~~VeIl~~~~-~-~~----e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-l~~ll~~h~~---~ 210 (497)
+. .++++.... . +. .....+++||++||++++++++ ++|+|++||++++.+ +.++++.|.+ +
T Consensus 74 ~~-~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~-------~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~ 145 (303)
T 3pnn_A 74 RI-PVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR-------EPFAVINADDFYGRNGFEVLARKLMTLEGK 145 (303)
T ss_dssp TS-CEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC-------SCEEEEESSCBCCHHHHHHHHHHHHTTTTC
T ss_pred CC-cEEEEecccccccccccccccccccCCcHHHHHHHHHhcC-------CCEEEEECCeecCHHHHHHHHHHHHHhccc
Confidence 21 133332110 0 00 0000134799999999987773 789999999999876 8999999976 6
Q ss_pred CCCeEEEEeeeCCCCCCcc-----eEEEECCCCCEEEEeecCCcccccc-ccccccccCCCcc-ccccCCccceeeEEEE
Q 010922 211 DADITISCAAVGESRASDY-----GLVKIDNMGRIAQFAEKPSGANLKA-MQVDTSLLGFSPQ-EARKCPYVASMGVYVF 283 (497)
Q Consensus 211 ~a~~tl~~~~~~~~~~~~~-----g~v~~d~~g~V~~~~EKp~~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~~Giyif 283 (497)
++++++++.+++++ .++| |++.+|++|+|++|.|||....... .... ....+ .....++++++|+|+|
T Consensus 146 ~~~~~v~~~~~~~~-~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~----~~~g~~~~~~~~~~i~~GiY~f 220 (303)
T 3pnn_A 146 QGEYCMVGYRVGNT-LSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFR----DETGKICTLAEDAPVSMNMWGF 220 (303)
T ss_dssp SSEEEEEEEEGGGS-CBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEE----CTTSCEEEECTTCEEEEEEEEE
T ss_pred cCceEEEEEECCCc-cCccCceeeeeEeeCCCCcEEEEEECCCCcccccccccc----ccccccccCCCCCEEEEEEEEE
Confidence 78899999888663 1455 6888998999999999997531000 0000 00000 0001257899999999
Q ss_pred cHHHHHHHHhh--------hC--CCCCchhhhhHHhhhccC--ceEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010922 284 KKDVLFKLLRW--------RY--PTSNDFGSEIIPAAIMEH--DVQAYIFRDYWEDIGTIKSFYEANMALTK 343 (497)
Q Consensus 284 ~~~vL~~ll~~--------~~--~~~~d~~~~ii~~li~~~--~v~~~~~~g~w~dIgt~~~y~~An~~l~~ 343 (497)
++++|.. ++. .. +....+.+++++.+++++ ++.+|.++++|.|||||++|.+|+..+.+
T Consensus 221 ~~~~~~~-l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 221 TPDYFDY-SEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp CTHHHHH-HHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred CHHHHHH-HHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 9999864 332 21 223456788999999886 79999999999999999999999987764
No 17
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.97 E-value=6.5e-30 Score=256.26 Aligned_cols=232 Identities=21% Similarity=0.326 Sum_probs=185.5
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcc-cChhHHHHHHHhcccCCCcccCCC
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQ-FNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~-~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
|+|||||+|.|+||+|+|..+||+|+||+|+ |||+|++++|.++|+++|+|++. +..+.+.+++. .+..|+..
T Consensus 3 ~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~-----~g~~~g~~ 76 (293)
T 1fxo_A 3 RKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLG-----DGSNWGLD 76 (293)
T ss_dssp EEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHT-----TSGGGTCE
T ss_pred ceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHh-----cccccCce
Confidence 7899999999999999999999999999999 69999999999999999998874 55677777764 33345532
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee-ccCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~-~~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
+.++. +. .+.|++++++.+..++. .+++++++||+++ ..++.++++.|.+.+.++++++.++.
T Consensus 77 -i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~ 140 (293)
T 1fxo_A 77 -LQYAV--QP-------SPDGLAQAFLIGESFIG------NDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVL 140 (293)
T ss_dssp -EEEEE--CS-------SCCCGGGHHHHTHHHHT------TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECS
T ss_pred -EEEee--CC-------CCCCHHHHHHHHHHHhC------CCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECC
Confidence 33222 11 13699999999998885 2789999999865 67999999999877778888888776
Q ss_pred CCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC--CC
Q 010922 223 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT--SN 300 (497)
Q Consensus 223 ~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~--~~ 300 (497)
+ +.+||++..|++|+|..|.|||..+. ++++++|+|+|++++|.. ++...+. ..
T Consensus 141 d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~-~~~~~~~~~ge 196 (293)
T 1fxo_A 141 D--PERYGVVEFDQGGKAISLEEKPLEPK---------------------SNYAVTGLYFYDQQVVDI-ARDLKPSPRGE 196 (293)
T ss_dssp C--GGGSEEEEECTTSCEEEEEESCSSCS---------------------SSEEEEEEEEECTTHHHH-HHHCCCCTTSS
T ss_pred C--cccCcEEEECCCCcEEEEEECCCCCC---------------------CCeEEEEEEEEcHHHHHH-HHhcCcccCCc
Confidence 6 56799999999999999999986432 368999999999999864 4443332 12
Q ss_pred chhhhhHHhhhccCceEEEEec-cE-EEecCCHHHHHHHHHHhh
Q 010922 301 DFGSEIIPAAIMEHDVQAYIFR-DY-WEDIGTIKSFYEANMALT 342 (497)
Q Consensus 301 d~~~~ii~~li~~~~v~~~~~~-g~-w~dIgt~~~y~~An~~l~ 342 (497)
...+++++.+++++++.++... +| |.||||+++|.+|+..+.
T Consensus 197 ~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 197 LEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp CCHHHHHHHHHHTTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHhcCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 2347888888888888888775 75 999999999999997654
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.97 E-value=3.7e-30 Score=258.39 Aligned_cols=233 Identities=18% Similarity=0.267 Sum_probs=185.8
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcc-cChhHHHHHHHhcccCCCcccCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQ-FNSASLNRHIARTYFGNGTNFGD 142 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~-~~~~~l~~~l~~~y~~~g~~~~~ 142 (497)
.|+|||||+|.|+||+|+|..+||+|+||+|+ |||+|+++.+..+|+++|+|+++ +..+.+.+++. .+..|+.
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~-----~g~~~g~ 76 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLG-----DGSEFGI 76 (296)
T ss_dssp CCEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHT-----TSGGGTC
T ss_pred ccEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHh-----cccccCc
Confidence 48999999999999999999999999999999 69999999999999999999886 56677777763 3334552
Q ss_pred CeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee-ccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 143 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 143 ~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~-~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
. +.++. +. .+.||+++++.+..++. .++++++.||+++ ..++.++++.|.+.+.++++++.++
T Consensus 77 ~-i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v 140 (296)
T 1mc3_A 77 Q-LEYAE--QP-------SPDGLAQAFIIGETFLN------GEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQV 140 (296)
T ss_dssp E-EEEEE--CS-------SCCCSTHHHHHTHHHHT------TSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEEC
T ss_pred e-EEEec--cC-------CCCCHHHHHHHHHHHhC------CCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEEC
Confidence 2 33332 11 13699999999998885 2678888899865 6799999999987777888888887
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC--C
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT--S 299 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~--~ 299 (497)
.+ +.+||++..|++|+|..|.|||..+. ++++++|+|+|+++++.. ++...+. .
T Consensus 141 ~d--p~~yg~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~-~~~~~~~~~g 196 (296)
T 1mc3_A 141 MD--PERFGVVEFDDNFRAISLEEKPKQPK---------------------SNWAVTGLYFYDSKVVEY-AKQVKPSERG 196 (296)
T ss_dssp SC--CSSSBBCEEETTEEEEECCBSCSSCS---------------------CSEEEEEEEECCTHHHHH-HHSCCCCSSS
T ss_pred CC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEEEEEcHHHHHH-HHhcCccccC
Confidence 76 55799999998999999999986442 368899999999999864 4543332 1
Q ss_pred CchhhhhHHhhhccCceEEEEec-cE-EEecCCHHHHHHHHHHhh
Q 010922 300 NDFGSEIIPAAIMEHDVQAYIFR-DY-WEDIGTIKSFYEANMALT 342 (497)
Q Consensus 300 ~d~~~~ii~~li~~~~v~~~~~~-g~-w~dIgt~~~y~~An~~l~ 342 (497)
....+++++.+++++++.++... +| |.||||+++|.+|+..+.
T Consensus 197 e~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 197 ELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp SCCHHHHHHHHHHTTCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHhcCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 22347788888888888888775 75 999999999999997765
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.96 E-value=2.1e-29 Score=254.20 Aligned_cols=240 Identities=14% Similarity=0.234 Sum_probs=155.3
Q ss_pred ceEEEEecCCCCCcccCCCC-CCCCccccc-cCcccchhHhHHHHHhcCCcEEEEEcccCh-hHHHHHHHhcccCCCccc
Q 010922 64 VAYAVMTSKHPNEVMTLAPP-RAATPAVPV-AGCYRLIDIPMSNCINSGINKIFVLTQFNS-ASLNRHIARTYFGNGTNF 140 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~-~~PK~LlPI-~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~-~~l~~~l~~~y~~~g~~~ 140 (497)
.|+|||||+|.|+||+|+|. .+||||+|| +|+ |||+|+++++.++ +++|+|++++.. +.+.+++.+ + |
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~-----~--~ 74 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKN-----E--I 74 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTT-----T--C
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHH-----h--h
Confidence 58999999999999999996 799999999 599 6999999999999 999999999875 456666632 1 3
Q ss_pred CCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee-ccC-HHHHHHH---HHHcCCCeE
Q 010922 141 GDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RMD-YMDFIQS---HVDRDADIT 215 (497)
Q Consensus 141 ~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~-~~d-l~~ll~~---h~~~~a~~t 215 (497)
+...+.++... +..||+++++.+..++. ..+.|+|++||+++ +.+ +.++++. |.++++++|
T Consensus 75 ~~~~~~~i~~~---------~~~gt~~al~~a~~~l~-----~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t 140 (308)
T 2qh5_A 75 KNKSVGFLLES---------LSKNTANAIALSALMSD-----KEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVT 140 (308)
T ss_dssp SSCEEEEEEES---------SCCCHHHHHHHHHHTSC-----TTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCccEEEeCC---------CCCChHHHHHHHHHHhC-----CCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEE
Confidence 32123333221 13699999999987773 12459999999998 666 8999987 777788888
Q ss_pred EEEeeeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhh
Q 010922 216 ISCAAVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWR 295 (497)
Q Consensus 216 l~~~~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~ 295 (497)
+.+.+.++ ...||++..|++++|..|.|||.......+ ....++++++|+|+|++++|.+.+++.
T Consensus 141 ~~~~~~~~--~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~-------------~~~g~~~~n~Giy~~~~~~ll~~l~~~ 205 (308)
T 2qh5_A 141 FGVSIDKP--NTEFGYIESPNGLDVKRFIEKPSLDKAIEF-------------QKSGGFYFNSGMFVFQAGVFLDELKKH 205 (308)
T ss_dssp EEEECSSC--CTTSEEEECSSSSBCSEEEESCCHHHHHHH-------------HHHCCEEEEEEEEEEEHHHHHHHHHHH
T ss_pred EEEecCCC--CCCceEEEECCCCEEEEEEECCChHHHHHH-------------hhcCCeEEEeEEEEEEHHHHHHHHHHh
Confidence 88887654 467999988878999999999875421100 000247899999999999875555543
Q ss_pred CCC--------------C----Cchh---hhhHHh---------hhcc-CceEEEEeccEEEecCCHHHHHHHHHHh
Q 010922 296 YPT--------------S----NDFG---SEIIPA---------AIME-HDVQAYIFRDYWEDIGTIKSFYEANMAL 341 (497)
Q Consensus 296 ~~~--------------~----~d~~---~~ii~~---------li~~-~~v~~~~~~g~w~dIgt~~~y~~An~~l 341 (497)
.+. . .++. .++++. ++++ .++.+|.++++|.|||||++|.+++...
T Consensus 206 ~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~ 282 (308)
T 2qh5_A 206 APTILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANE 282 (308)
T ss_dssp CHHHHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC--------------
T ss_pred ChHHHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcC
Confidence 221 0 1111 344442 4555 6899999999999999999999998653
No 20
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.95 E-value=3.5e-28 Score=248.16 Aligned_cols=234 Identities=17% Similarity=0.214 Sum_probs=172.4
Q ss_pred ceEEEEecCCCCCcccCCC-CCCCCccccccC-cccchhHhHHHHHhc-CCcEEEEEcccCh-hHHHHHHHhcccCCCcc
Q 010922 64 VAYAVMTSKHPNEVMTLAP-PRAATPAVPVAG-CYRLIDIPMSNCINS-GINKIFVLTQFNS-ASLNRHIARTYFGNGTN 139 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt-~~~PK~LlPI~g-~p~LId~~L~~l~~~-GI~~I~Iv~~~~~-~~l~~~l~~~y~~~g~~ 139 (497)
+|++||||+|.|+||+|+| ..+||+|+|++| + |||+|+++++.++ |+++|+|++++.. +.+.+++.+ ...
T Consensus 1 mm~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~-pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~-----~~~ 74 (336)
T 2x65_A 1 VMKALILAGGSGERFWPLSTPETPKQFLKLFGNK-SLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPE-----LPD 74 (336)
T ss_dssp CCEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTB-CHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTT-----SCG
T ss_pred CeEEEEECCCCCccCCCCcCCCCCceEEECCCCC-cHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhc-----ccc
Confidence 5899999999999999999 779999999999 8 6999999999997 8999999999874 445555531 111
Q ss_pred cCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeecc--CHHH----HHHHHHHcCCC
Q 010922 140 FGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRM--DYMD----FIQSHVDRDAD 213 (497)
Q Consensus 140 ~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~--dl~~----ll~~h~~~~a~ 213 (497)
+. + ++.+. ..||+++++.+...+. ..+.+++++||+++.. ++.+ +++.|.++++.
T Consensus 75 ~~---i-i~e~~----------~~gta~ai~~a~~~~~-----~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~ 135 (336)
T 2x65_A 75 EN---I-IAEPM----------KKNTAPACFIGTKLAD-----DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGL 135 (336)
T ss_dssp GG---E-EEESS----------CCCHHHHHHHHHTTSC-----TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSE
T ss_pred ce---E-EeCCC----------CCCcHHHHHHHHHhhC-----CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCe
Confidence 21 2 23222 2699999998875442 2467999999998854 4444 44457766777
Q ss_pred eEEEEeeeCCCCCCcceEEEECCC-----CCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHH
Q 010922 214 ITISCAAVGESRASDYGLVKIDNM-----GRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVL 288 (497)
Q Consensus 214 ~tl~~~~~~~~~~~~~g~v~~d~~-----g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL 288 (497)
+|+.+.+... .+.||++..|++ ++|..|.|||....... ++....+++++|+|+|+++.|
T Consensus 136 vt~~i~p~~~--~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~-------------~~~~g~y~~n~Giy~~~~~~l 200 (336)
T 2x65_A 136 FTFGIVPTRP--ETGYGYIEIGEELEEGVHKVAQFREKPDLETAKK-------------FVESGRFLWNSGMFLWKAREF 200 (336)
T ss_dssp EEEEECCCSC--CSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHH-------------HHHHTCEEEEEEEEEEEHHHH
T ss_pred EEEEeecccC--CCCceEEEECCccCCCccEEEEEEECCChHHHHH-------------HHhcCCeEEEeeeEEEEHHHH
Confidence 8888777654 357999988764 79999999998643210 000123789999999999988
Q ss_pred HHHHhhhCCC----------CC-chhhhhHHh---------hhcc-CceEEEEeccEEEecCCHHHHHHH
Q 010922 289 FKLLRWRYPT----------SN-DFGSEIIPA---------AIME-HDVQAYIFRDYWEDIGTIKSFYEA 337 (497)
Q Consensus 289 ~~ll~~~~~~----------~~-d~~~~ii~~---------li~~-~~v~~~~~~g~w~dIgt~~~y~~A 337 (497)
.+.+++..|. .. +|..+.++. ++++ .++.+++++++|.||||+++|+++
T Consensus 201 l~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 201 IEEVKVCEPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HHHHHHHCHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 5555543321 01 344566665 3444 689999999999999999999999
No 21
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.95 E-value=2.5e-27 Score=232.53 Aligned_cols=221 Identities=11% Similarity=0.145 Sum_probs=163.4
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
.|.|||||+|.|+||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++...+ +. |+
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~-~~-------~~-- 93 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLK-EK-------YG-- 93 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHH-HH-------HC--
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHH-Hh-------CC--
Confidence 48999999999999999999999999999999 699999999999999999999998877664433 22 23
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccCHHHHHHHHHHcCCCeEEEEeeeCC
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCAAVGE 223 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~dl~~ll~~h~~~~a~~tl~~~~~~~ 223 (497)
++++...+. ...||+++++.+..++ ++++|++||+++..++ ++.+.++++.+|+ ...+
T Consensus 94 -~~iv~~~~~-------~~~g~~~al~~a~~~~--------~~~lv~~~D~~~~~~~---~~~~~~~~~~~t~---~~~~ 151 (254)
T 1jyk_A 94 -VRLVFNDKY-------ADYNNFYSLYLVKEEL--------ANSYVIDADNYLFKNM---FRNDLTRSTYFSV---YRED 151 (254)
T ss_dssp -CEEEECTTT-------TTSCTHHHHHTTGGGC--------TTEEEEETTEEESSCC---CCSCCCSEEEEEC---EESS
T ss_pred -cEEEECCCc-------cCCCcHHHHHHHHHHC--------CCEEEEeCCcccCHHH---HHHHHhCCceEEE---Eccc
Confidence 344443221 1259999999887555 3599999999986654 3333333332332 2233
Q ss_pred CCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHH---HHHHhhhCCC--
Q 010922 224 SRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVL---FKLLRWRYPT-- 298 (497)
Q Consensus 224 ~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL---~~ll~~~~~~-- 298 (497)
+ ...|+++ .|++|+|..|.|||. ..++++|+|+|+++.+ .+++++..+.
T Consensus 152 ~-~~~~~v~-~d~~g~v~~~~e~~~------------------------~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~ 205 (254)
T 1jyk_A 152 C-TNEWFLV-YGDDYKVQDIIVDSK------------------------AGRILSGVSFWDAPTAEKIVSFIDKAYVSGE 205 (254)
T ss_dssp C-SSCCEEE-ECTTCBEEEEECCCS------------------------SEEBCCSEEEECHHHHHHHHHHHHHHHTTTC
T ss_pred C-CCCeEEE-ECCCCeEEEEEECCC------------------------CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCC
Confidence 2 1358755 788899999999753 2478999999998744 3334432221
Q ss_pred -CCchhhhhHHhhhccCceEEEEec-cEEEecCCHHHHHHHHHHhhc
Q 010922 299 -SNDFGSEIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMALTK 343 (497)
Q Consensus 299 -~~d~~~~ii~~li~~~~v~~~~~~-g~w~dIgt~~~y~~An~~l~~ 343 (497)
...|++++++.+++..++.++.++ ++|.+|+|+++|.++++.+.+
T Consensus 206 ~~e~~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~~ 252 (254)
T 1jyk_A 206 FVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252 (254)
T ss_dssp CTTCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHHHHC-
T ss_pred ccccCHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHHHHHHHhhh
Confidence 345677788888777899999987 799999999999999988754
No 22
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.94 E-value=1.2e-26 Score=236.82 Aligned_cols=232 Identities=19% Similarity=0.255 Sum_probs=166.3
Q ss_pred eEEEEecCCCCCcccCCC-CCCCCccccccC-cccchhHhHHHHHhc-CCcEEEEEcccChhHHHHHHHhcccCCCcccC
Q 010922 65 AYAVMTSKHPNEVMTLAP-PRAATPAVPVAG-CYRLIDIPMSNCINS-GINKIFVLTQFNSASLNRHIARTYFGNGTNFG 141 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt-~~~PK~LlPI~g-~p~LId~~L~~l~~~-GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~ 141 (497)
|.+||||+|.|+||+|+| ..+||+|+|++| + |||+|+++++.++ |+++|+|++++..... + +.+++..
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~-pli~~~l~~l~~~~~~~~iiVvt~~~~~~~---i-~~~l~~~---- 73 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPLFEGK-TLLEATLERLAPLVPPERTLLAVRRDQEAV---A-RPYADGI---- 73 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGC-BHHHHHHHHHTTTSCGGGEEEEEEGGGHHH---H-GGGCSSS----
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEcCCCC-hHHHHHHHHHhCcCCCCCEEEEcChHHHHH---H-HHHhccC----
Confidence 799999999999999999 689999999999 8 6999999999998 8999999999864321 2 2222221
Q ss_pred CCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeecc--CHHHHHH----HHHHcCCCeE
Q 010922 142 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRM--DYMDFIQ----SHVDRDADIT 215 (497)
Q Consensus 142 ~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~--dl~~ll~----~h~~~~a~~t 215 (497)
.+ ++.+. ..||+.++..+.. +... ...+.|++++||+++.. .+..+++ .|.+ ++.+|
T Consensus 74 --~~-i~e~~----------~~gta~ai~~a~~-l~~~--~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt 136 (337)
T 2cu2_A 74 --RL-LLEPL----------GRDTAGAVLLGVA-EALK--EGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVA 136 (337)
T ss_dssp --EE-EEESS----------CCHHHHHHHHHHH-HHHH--HTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEE
T ss_pred --ce-EecCC----------CCCcHHHHHHHHH-Hhcc--CCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEE
Confidence 12 33322 2699999999877 5310 12478999999998853 4444444 4444 67788
Q ss_pred EEEeeeCCCCCCcceEEEECCC----CCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHH
Q 010922 216 ISCAAVGESRASDYGLVKIDNM----GRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKL 291 (497)
Q Consensus 216 l~~~~~~~~~~~~~g~v~~d~~----g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~l 291 (497)
+.+.+..+ .+.||++..|++ ++|..|.|||..+....+ .... +++++|+|+|++++|.+.
T Consensus 137 ~~i~p~~~--~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~-------------~~~g-~~~n~Giy~f~~~~ll~~ 200 (337)
T 2cu2_A 137 LGLRPTRP--ETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEY-------------IRKG-YVWNGGVFAFAPATMAEL 200 (337)
T ss_dssp EEECCSSC--CSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHH-------------HHTT-CEEEEEEEEECHHHHHHH
T ss_pred EeeccCCC--CCCceEEEECCcccccCeEEEEEeCCChHHHHHH-------------hhcC-CEEEEEEEEEeHHHHHHH
Confidence 88877654 457999998765 799999999985432110 0011 689999999999988556
Q ss_pred HhhhCCCCC-ch--------hhhhHHh---------hhcc-CceEEEEeccEEEecCCHHHHHHHH
Q 010922 292 LRWRYPTSN-DF--------GSEIIPA---------AIME-HDVQAYIFRDYWEDIGTIKSFYEAN 338 (497)
Q Consensus 292 l~~~~~~~~-d~--------~~~ii~~---------li~~-~~v~~~~~~g~w~dIgt~~~y~~An 338 (497)
+++..|... .+ ..+.++. ++++ .++.+++++++|.||||+++|+++.
T Consensus 201 l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~ 266 (337)
T 2cu2_A 201 FRRHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVF 266 (337)
T ss_dssp HHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHH
T ss_pred HHHHCHHHHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHh
Confidence 655433210 01 1334543 3444 6899999999999999999999884
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.92 E-value=2.3e-24 Score=211.21 Aligned_cols=238 Identities=12% Similarity=0.169 Sum_probs=168.6
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
+.|||||+|.|+|| | ||+|+||+|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ |+
T Consensus 3 ~~aiIlA~G~stRl-p-----~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~--------~g--- 62 (252)
T 3oam_A 3 FTVVIPARYQSTRL-P-----GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA--------FG--- 62 (252)
T ss_dssp EEEEEECCCCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--------TT---
T ss_pred eEEEEecCcCCCCC-C-----CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH--------cC---
Confidence 68999999999998 3 7999999999 59999999999999999999995 4667777642 23
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
++++...+ ++..||++ +..+...+. ....+.|++++||. +...++.++++.|.++++++++++.+++
T Consensus 63 ~~v~~~~~-------~~~~Gt~~-~~~~~~~l~---~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~ 131 (252)
T 3oam_A 63 GVVCMTSP-------NHQSGTER-LAEVVAKMA---IPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIE 131 (252)
T ss_dssp CEEEECCT-------TCCSHHHH-HHHHHHHTT---CCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEEC
T ss_pred CEEEEcCC-------CCCCcHHH-HHHHHHhcC---cCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecC
Confidence 23332111 12369998 445554552 01247899999998 3467899999999988889999999987
Q ss_pred CCCCCcc-----eEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCC
Q 010922 223 ESRASDY-----GLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP 297 (497)
Q Consensus 223 ~~~~~~~-----g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~ 297 (497)
+ +.+| +.+..|++|+++.|.+||-........-. +. ....+++.++|+|+|++++|..+.... +
T Consensus 132 ~--~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~~~-----~~---~~~~~~~~n~GiY~~~~~~l~~~~~~~-~ 200 (252)
T 3oam_A 132 D--EAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKA-----DK---AIVQPLLRHIGIYAYRAGFINTYLDWQ-P 200 (252)
T ss_dssp C--HHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHHSS-----SC---CCCSCEEEEEEEEEEETTHHHHHHHSC-C
T ss_pred C--HHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCccccc-----cc---cccccceEEEEEEEcCHHHHHHHHcCC-C
Confidence 6 4456 88999999999999998754321000000 00 001257899999999999998765432 2
Q ss_pred CCCchhh--hhHHhhhccCceEEEEec-cEEEecCCHHHHHHHHHHhhcC
Q 010922 298 TSNDFGS--EIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMALTKE 344 (497)
Q Consensus 298 ~~~d~~~--~ii~~li~~~~v~~~~~~-g~w~dIgt~~~y~~An~~l~~~ 344 (497)
+.....+ +.+..+-...+|.++... .+|.|||||+||.+|+..+.++
T Consensus 201 ~~~e~~E~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 201 SQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp CHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred CcccccchhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 2111111 223322234689998764 5789999999999999887654
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.89 E-value=2.6e-22 Score=197.12 Aligned_cols=236 Identities=12% Similarity=0.181 Sum_probs=157.6
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
+.|||||+|.|+||. ||+|+||+|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ +|
T Consensus 10 ~~aIIlA~G~stRl~------~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~--------~g--- 69 (256)
T 3tqd_A 10 FRVIIPARFDSTRLP------GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED--------FG--- 69 (256)
T ss_dssp CEEEEECCCC---CT------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--------TT---
T ss_pred ceEEEEcCCCCCCCC------CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH--------cC---
Confidence 589999999999994 8999999999 59999999999999999999986 4666666632 23
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee--ccCHHHHHHHHHHc-CCCeEEEEeee
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDR-DADITISCAAV 221 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~--~~dl~~ll~~h~~~-~a~~tl~~~~~ 221 (497)
++++...+ +++.||+. ++.+...+. ....+.|+++.||.-+ ...+..+++.|.+. ++++++++.++
T Consensus 70 ~~v~~~~~-------~~~~Gt~~-i~~a~~~l~---~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v 138 (256)
T 3tqd_A 70 AVVCMTSS-------DHQSGTER-IAEAAVALG---FEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPI 138 (256)
T ss_dssp CEEEECCT-------TCCSHHHH-HHHHHHHTT---CCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEEC
T ss_pred CeEEEeCC-------CCCCcHHH-HHHHHHHhC---cCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEc
Confidence 23332111 23468876 777776663 1134789999999933 56789999999874 66788888876
Q ss_pred CCC----CCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCC
Q 010922 222 GES----RASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP 297 (497)
Q Consensus 222 ~~~----~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~ 297 (497)
.++ .+..++ |..|++|+++.|.+||.......... +++.....+++...|+|.|++++|..+... .+
T Consensus 139 ~~~~~~~~p~~vk-vv~d~~g~~l~fsr~pip~~r~~~~~-------~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l-~~ 209 (256)
T 3tqd_A 139 TEVDELFNPHSTK-VVLNRRNYALYFSHAPIPWGRDTFSD-------KENLQLNGSHYRHVGIYAYRVGFLEEYLSW-DA 209 (256)
T ss_dssp CCHHHHTCTTSCE-EEECTTSBEEEEESSCSSCCTTTTTC-------GGGCCCSSCCEEEEEEEEEEHHHHHHHHHS-CC
T ss_pred CCHHHhhCCCccE-EEECCCCEEeEEecCCCCCCCccccc-------ccccccCCcceEEEEEEEcCHHHHHHHHhC-CC
Confidence 431 122333 45889999999999976421100000 000001135789999999999999875432 23
Q ss_pred CCCchhh--hhHHhhhccCceEEEEeccE-EEecCCHHHHHHHHHH
Q 010922 298 TSNDFGS--EIIPAAIMEHDVQAYIFRDY-WEDIGTIKSFYEANMA 340 (497)
Q Consensus 298 ~~~d~~~--~ii~~li~~~~v~~~~~~g~-w~dIgt~~~y~~An~~ 340 (497)
+.....+ +.+..+-...++.++..+++ |.+||||+||.+++..
T Consensus 210 s~lE~~e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 210 CPAEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp CHHHHHHTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred CcccchhhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 2111111 22333334579999999875 8999999999998753
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.88 E-value=5.4e-22 Score=195.66 Aligned_cols=237 Identities=13% Similarity=0.179 Sum_probs=162.8
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
+.|||||+|.|+|| | +|+|+||+|+ |||+|+++++.++|+++|+|+++ .+.+.+++.+ |+
T Consensus 19 ~~aIIlA~G~stRl-p-----~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~--------~g--- 78 (264)
T 3k8d_A 19 FVVIIPARYASTRL-P-----GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVEA--------AG--- 78 (264)
T ss_dssp CEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH--------TT---
T ss_pred eEEEEEcCCCCCCC-C-----CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH--------cC---
Confidence 68999999999998 2 5999999999 59999999999999999999985 4666666632 23
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
++++...+ .++.||+. ++.+...++ ....+.|+++.||. +....+..+++.|.+.++++++++.++.
T Consensus 79 ~~v~~~~~-------~~~~Gt~~-i~~~~~~l~---~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~ 147 (264)
T 3k8d_A 79 GEVCMTRA-------DHQSGTER-LAEVVEKCA---FSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIH 147 (264)
T ss_dssp CEEEECCT-------TCCSHHHH-HHHHHHHHT---CCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECC
T ss_pred CEEEEecC-------CCCCCHHH-HHHHHHHhc---cCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcC
Confidence 23332111 23468887 777766663 11347899999998 4467899999999888899999999887
Q ss_pred CCC-CCcce--EEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCC
Q 010922 223 ESR-ASDYG--LVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTS 299 (497)
Q Consensus 223 ~~~-~~~~g--~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~ 299 (497)
++. ..+.+ -+..|++|+++.|.+||..........+ +.....+++.++|+|.|++++|..+... .++.
T Consensus 148 d~~~~~~p~~vkVv~d~~g~~l~fsr~~ip~~r~~~~~~--------~~~~~~~~~~~~GiY~y~~~~l~~~~~~-~~~~ 218 (264)
T 3k8d_A 148 NAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEG--------LETVGDNFLRHLGIYGYRAGFIRRYVNW-QPSP 218 (264)
T ss_dssp SHHHHTCTTSCEEEECTTSBEEEEESSCCSCCHHHHHHC--------SSCCCSCCEEECSEEEEEHHHHHHHHHS-CCCH
T ss_pred CHHHccCCCceEEEECCCCeEEEEecCCCCCCCcccccc--------ccccCCcceEEEEEEEECHHHHHHHHhC-CCCh
Confidence 521 11222 2457899999999999863211000000 0000124789999999999999876543 2221
Q ss_pred Cchhh--hhHHhhhccCceEEEEec-cEEEecCCHHHHHHHHHHh
Q 010922 300 NDFGS--EIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMAL 341 (497)
Q Consensus 300 ~d~~~--~ii~~li~~~~v~~~~~~-g~w~dIgt~~~y~~An~~l 341 (497)
....+ +.+..+-...+|.++... .+|.+|+||+||.+|+..|
T Consensus 219 lE~~e~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 219 LEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp HHHHHTCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 11001 223333334689998664 4689999999999998653
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.87 E-value=3e-21 Score=185.76 Aligned_cols=224 Identities=13% Similarity=0.182 Sum_probs=152.6
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
+.|||||+|.|+||. ||+|+|++|+ |||+|+++++.++ +++|+|++++ +++.+++.+ +
T Consensus 3 ~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~--------~---- 60 (234)
T 2y6p_A 3 RAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVED--------L---- 60 (234)
T ss_dssp EEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTT--------T----
T ss_pred eEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHh--------c----
Confidence 689999999999996 9999999999 6999999999999 9999999986 566666631 1
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe-eec-cCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYR-MDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
+.++...+ .+..|+++++. +...+ ..+.|++++||+ +++ .++.++++.|.+.+..+++......
T Consensus 61 ~~~~~~~~-------~~~~g~~~~~~-~~~~~------~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 126 (234)
T 2y6p_A 61 CEVFLTPS-------DLPSGSDRVLY-VVRDL------DVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKE 126 (234)
T ss_dssp SEEEECCT-------TCCSHHHHHHH-HHTTC------CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSG
T ss_pred eEEEECCc-------ccccchHHHHH-HHHhC------CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHH
Confidence 12222111 12258888763 33222 247899999999 776 6899999999887743455444211
Q ss_pred C-CCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCc
Q 010922 223 E-SRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 301 (497)
Q Consensus 223 ~-~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d 301 (497)
. ..+..++ +..|++|+|..|.|||....... .+ .+.+.++|+|+|+++.|..+.+. .+....
T Consensus 127 ~~~~~~~~~-~~~~~~g~v~~~~e~~~~~~~~~--~~-------------~~~~~~~giy~~~~~~l~~~~~~-~~~~~~ 189 (234)
T 2y6p_A 127 AYERPEDVK-VVLDREGYALYFSRSPIPYFRKN--DT-------------FYPLKHVGIYGFRKETLMEFGAM-PPSKLE 189 (234)
T ss_dssp GGGCTTSCE-EEECTTSBEEEEESSCCSCCSSC--CS-------------SCCEEEEEEEEEEHHHHHHHHHS-CCCHHH
T ss_pred HhcCCCceE-EEEcCCCCEeeeecCCCCccccc--cc-------------ceeeEEEEEEEcCHHHHHHHHhC-CCCccc
Confidence 1 1122344 34577899999999875311000 00 13567999999999998765532 111111
Q ss_pred hhhh--hHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHh
Q 010922 302 FGSE--IIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMAL 341 (497)
Q Consensus 302 ~~~~--ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l 341 (497)
.... .+..+.+..++.+|..+++|.||+||+||..|+..+
T Consensus 190 ~~d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 190 QIEGLEQLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HHHTCTHHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 1111 122233467899999999999999999999998764
No 27
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.87 E-value=2e-21 Score=188.51 Aligned_cols=227 Identities=16% Similarity=0.237 Sum_probs=157.7
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCC-cEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGI-NKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI-~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
+.|||||+|.|+|| | ||+|+|++|+ |||+|+++.+.++|+ ++|+|++++ +.+.+++.+ ++
T Consensus 3 ~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~--------~~-- 63 (245)
T 1h7e_A 3 AVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA--------FG-- 63 (245)
T ss_dssp EEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH--------TT--
T ss_pred eEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH--------cC--
Confidence 68999999999999 5 9999999999 599999999999996 999999986 556666632 22
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee--ccCHHHHHHHHHHc-CCCeEEEEee
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDR-DADITISCAA 220 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~--~~dl~~ll~~h~~~-~a~~tl~~~~ 220 (497)
++++...+ .+..|+++++..+. .++ .+.+++++||+.+ ..++..+++.|.+. ++++++++.+
T Consensus 64 -~~~~~~~~-------~~~~g~~~~~~~~~-~~~------~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 128 (245)
T 1h7e_A 64 -GKAIMTRN-------DHESGTDRLVEVMH-KVE------ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHA 128 (245)
T ss_dssp -CEEEECCS-------CCSSHHHHHHHHHH-HSC------CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEE
T ss_pred -CeEEeCCC-------ccCCcHHHHHHHHH-hCC------CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeec
Confidence 34443211 12358877664433 332 3789999999843 56789999999888 7888887777
Q ss_pred eCCCCCCcceE--EEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC
Q 010922 221 VGESRASDYGL--VKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT 298 (497)
Q Consensus 221 ~~~~~~~~~g~--v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~ 298 (497)
.+.....+++. +..+++|++..|.+++....... ...+.+.++|+|+|+++.|..++ . .+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~r~~---------------~~~~~~~~~g~y~~~~~~l~~~~-~-~~~ 191 (245)
T 1h7e_A 129 ISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRNA---------------EKARYLKHVGIYAYRRDVLQNYS-Q-LPE 191 (245)
T ss_dssp ECHHHHTCTTSCEEEECTTCBEEEEESSCSSCCTTG---------------GGCCEEEEEEEEEEEHHHHHHGG-G-SCC
T ss_pred CCHHHhcCCCCcEEEECCCCcEEEeecCCCCCCccc---------------ccCceeEEEEEEEcCHHHHHHHH-h-CCC
Confidence 62111112222 23367899999988754311000 00125679999999999887655 2 222
Q ss_pred CCchhhhhHHhhh--c-cCceEEEEeccEEEecCCHHHHHHHHHHhh
Q 010922 299 SNDFGSEIIPAAI--M-EHDVQAYIFRDYWEDIGTIKSFYEANMALT 342 (497)
Q Consensus 299 ~~d~~~~ii~~li--~-~~~v~~~~~~g~w~dIgt~~~y~~An~~l~ 342 (497)
.....++.++.+. + ..++.++..+++|.||+||+||..|+..+.
T Consensus 192 ~~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~ 238 (245)
T 1h7e_A 192 SMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMA 238 (245)
T ss_dssp CHHHHHHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHH
T ss_pred CccccchhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHH
Confidence 2222345555432 3 468999999999999999999999987654
No 28
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.86 E-value=1.5e-21 Score=188.17 Aligned_cols=215 Identities=15% Similarity=0.176 Sum_probs=135.6
Q ss_pred CCceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccC
Q 010922 62 PGVAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFG 141 (497)
Q Consensus 62 ~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~ 141 (497)
+..|.|||||+|.|+||+|+ ||+|+|++|+ |||+|+++++.++ +++|+|++ +..+++.+++.+. |+
T Consensus 16 m~~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~-------~~ 81 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKD-------KG 81 (232)
T ss_dssp CCCEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTT-------SC
T ss_pred cccceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHh-------cC
Confidence 34589999999999999986 9999999999 6999999999999 99999999 7777777776432 22
Q ss_pred CCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 142 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 142 ~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
. .+.++.... +..|++++++.+..+++ +++++++||+.++.+ +++...+.. . +++....
T Consensus 82 ~-~~~~v~~~~--------~~~g~~~~i~~a~~~~~-------~~~lv~~~D~p~~~~---~~~~l~~~~-~-~~~~~~~ 140 (232)
T 2xme_A 82 F-NYKIVRHDR--------PEKGNGYSLLVAKNHVE-------DRFILTMGDHVYSQQ---FIEKAVRGE-G-VIADREP 140 (232)
T ss_dssp C-CEEEEECSC--------GGGCHHHHHHTTGGGCC-------SSEEEEETTEEECHH---HHHHHTTCC-E-EEEESSC
T ss_pred C-cEEEEECCC--------CCCCcHHHHHHHHHHCC-------CCEEEEcCCcccCHH---HHHHHHhCC-C-cEEEccc
Confidence 1 145554221 22699999999876653 679999999987443 233333221 1 2222111
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCc
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 301 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d 301 (497)
......+++.+..+ +|+|..|.+++.. .+.+++|+|+|++++|. .+++.......
T Consensus 141 ~~~~~~~~~~v~~~-~g~v~~~~~~~~~-----------------------~~~~~~g~~~~~~~~~~-~l~~~~~~g~~ 195 (232)
T 2xme_A 141 RFVDIGEATKIRVE-DGRVAKIGKDLRE-----------------------FDCVDTGFFVLDDSIFE-HAEKLRDREEI 195 (232)
T ss_dssp SSSCTTTSCEEEEE-TTEEEEEETTCSS-----------------------CSEEEEEEEEECTTHHH-HHGGGTTSSCC
T ss_pred cccCCCcceEEEEc-CCEEEEeecCCCC-----------------------cceEEEEEEEECHHHHH-HHHHHHhcChh
Confidence 11113457766665 6899999887642 24678999999999987 45543321111
Q ss_pred hhhhhHHhhhccCceEEEEec-cEEEecCCHHHHHHHHHH
Q 010922 302 FGSEIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMA 340 (497)
Q Consensus 302 ~~~~ii~~li~~~~v~~~~~~-g~w~dIgt~~~y~~An~~ 340 (497)
. ++.+++++++..+.+. ++|.||+||+||.+++..
T Consensus 196 ~----l~~ll~~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 196 P----LSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp C----HHHHHHHHTCBEEECCSCCEEEEECC---------
T ss_pred H----HHHHHHcCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 1 3344455567777775 699999999999988754
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.85 E-value=5.9e-20 Score=180.43 Aligned_cols=236 Identities=13% Similarity=0.219 Sum_probs=159.9
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
|.|||||+|.|+||. +|+|+|++|+ |||+|+++.+.++|+++|+|++++ +.+.+++.+ ++
T Consensus 3 ~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~--------~~--- 62 (262)
T 1vic_A 3 FTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS--------FG--- 62 (262)
T ss_dssp CEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH--------TT---
T ss_pred cEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh--------cC---
Confidence 689999999999994 3999999999 599999999999999999999975 456665532 22
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
++++...+ .+..|++ .+..+...+. ....+.+++++||. +...++.++++.|.+.++++++++.+..
T Consensus 63 ~~~~~~~~-------~~~~g~~-~~~~~~~~l~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~ 131 (262)
T 1vic_A 63 AEVCMTSV-------NHNSGTE-RLAEVVEKLA---IPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIH 131 (262)
T ss_dssp CEEEECCC-------SSCCHHH-HHHHHHHHTT---CCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEECCc-------cccCChH-HHHHHHHHhc---cCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecC
Confidence 23332111 1235776 4555555553 11246799999998 3456899999999888888888888766
Q ss_pred CC-C--CCcceEEEECCCCCEEEEeecCCccccccc-------cccccccCCCccccccCCccceeeEEEEcHHHHHHHH
Q 010922 223 ES-R--ASDYGLVKIDNMGRIAQFAEKPSGANLKAM-------QVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLL 292 (497)
Q Consensus 223 ~~-~--~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll 292 (497)
++ + ...|..+..|++|+++.|.+++........ ..+ .| ..+..++|+|+|++++|..+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~~~~~~~~~~~~------~p-----~~~~~~~giy~~~~~~l~~~~ 200 (262)
T 1vic_A 132 DAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQ------LS-----DAYLRHIGIYAYRAGFIKQYV 200 (262)
T ss_dssp CHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHTTCSCGGGCC------CC-----TTCEEEEEEEEEEHHHHHHHH
T ss_pred CHHHhcCCCceEEEECCCCCEeeeecCCCCcCCccccccccccccc------cc-----cceEEEEEEEEeeHHHHHHHH
Confidence 42 0 123444555778999999887632100000 000 01 125789999999999887653
Q ss_pred hhhCCCCCchhhhhHH--hhh-ccCceEEEEec-cEEEecCCHHHHHHHHHHhhcC
Q 010922 293 RWRYPTSNDFGSEIIP--AAI-MEHDVQAYIFR-DYWEDIGTIKSFYEANMALTKE 344 (497)
Q Consensus 293 ~~~~~~~~d~~~~ii~--~li-~~~~v~~~~~~-g~w~dIgt~~~y~~An~~l~~~ 344 (497)
.. .+...+.. ++++ .++ ...++.++..+ ++|.||+||+||..|+..+...
T Consensus 201 ~~-~~~~~~~~-e~~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~ 254 (262)
T 1vic_A 201 QW-APTQLENL-EKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAAN 254 (262)
T ss_dssp HS-CCCHHHHH-HTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred hC-CCCchhhh-hhHHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 32 11111111 1222 233 35689999998 7999999999999999887654
No 30
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.83 E-value=1.8e-19 Score=176.52 Aligned_cols=238 Identities=13% Similarity=0.151 Sum_probs=159.4
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhH-HHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPM-SNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L-~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
..|||+|+|.|+||. +|+|+||+|+ |||+|++ +.+.++|+++|+|+++. +.+.+++. . ++
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~~--~~i~~~~~-~-------~g-- 62 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATDD--ERIAEICR-A-------EG-- 62 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHH-T-------TT--
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECCH--HHHHHHHH-H-------cC--
Confidence 579999999999995 4999999999 5999999 99999999999999963 55666653 1 23
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe-ee-ccCHHHHHHHHHHc-CCCeEEEEee
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LY-RMDYMDFIQSHVDR-DADITISCAA 220 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~-l~-~~dl~~ll~~h~~~-~a~~tl~~~~ 220 (497)
++++...+ .+..|| +++..+...+.. ...+.|+++.||. +. ...+..+++.|.+. ++.+..++.+
T Consensus 63 -~~v~~~~~-------~~~~Gt-~~i~~a~~~~~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~ 130 (253)
T 4fcu_A 63 -VDVVLTSA-------DHPSGT-DRLSEVARIKGW---DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEP 130 (253)
T ss_dssp -CCEEECCT-------TCCCHH-HHHHHHHHHHTC---CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEE
T ss_pred -CeEEEeCC-------CCCChH-HHHHHHHHhcCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEE
Confidence 22221111 122577 478887776641 1247899999999 43 56789999999876 3444444444
Q ss_pred eCC----CCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhC
Q 010922 221 VGE----SRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRY 296 (497)
Q Consensus 221 ~~~----~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~ 296 (497)
..+ ..+..+. +..|++|+++.|.++|..........+ +......++.+.|+|.|++++|..+... .
T Consensus 131 ~~~~~~~~~p~~~k-vv~d~~g~~l~fsr~~ip~~r~~~~~~--------~~~~~~~~~~~~GiY~f~~~~l~~~~~~-~ 200 (253)
T 4fcu_A 131 IHALDEFQRDSIVK-VVMSKQNEALYFSRATIPYDRDGAKRD--------EPTLHTQAFRHLGLYAYRVSLLQEYVTW-E 200 (253)
T ss_dssp CCCHHHHHCTTSCE-EEECTTSBEEEEESSCCSCCTTTSSSS--------SCCCCSCCEEEEEEEEEEHHHHHHHTTS-C
T ss_pred cCCHHHccCCCccE-EEECCCCeEEEecCCCCCCCCCccccc--------ccccccceeEEEEEEEeCHHHHHHHHhC-C
Confidence 321 1133444 567889999999998753211100000 0000124678999999999999876532 1
Q ss_pred CCCCchhhhhHHh---hhccCceEEEEeccE-EEecCCHHHHHHHHHHhhcC
Q 010922 297 PTSNDFGSEIIPA---AIMEHDVQAYIFRDY-WEDIGTIKSFYEANMALTKE 344 (497)
Q Consensus 297 ~~~~d~~~~ii~~---li~~~~v~~~~~~g~-w~dIgt~~~y~~An~~l~~~ 344 (497)
++ .....+.+.. +-...+|.++..+++ |.+||||+||.+|+..|.+|
T Consensus 201 ~~-~le~~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 201 MG-KLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp CC-HHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred CC-cccchhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 21 1112233332 223478999999999 99999999999999776654
No 31
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.82 E-value=1.3e-19 Score=174.25 Aligned_cols=225 Identities=10% Similarity=0.029 Sum_probs=141.0
Q ss_pred CceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhc-CCcEEEEEcccCh-hHHHHHHHhcccCCCccc
Q 010922 63 GVAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINS-GINKIFVLTQFNS-ASLNRHIARTYFGNGTNF 140 (497)
Q Consensus 63 ~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~-GI~~I~Iv~~~~~-~~l~~~l~~~y~~~g~~~ 140 (497)
++|.|||||+|.|+||.+ ..+||+|+|++|+ |||+|+++++.++ ++++|+|++++.. +.+.+++. .| + ..+
T Consensus 1 ~m~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~-~~-~--~~~ 73 (236)
T 2vsh_A 1 HMIYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVD-KY-L--PLY 73 (236)
T ss_dssp CCEEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHH-HH-C--GGG
T ss_pred CceEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHH-hc-c--ccc
Confidence 368999999999999998 6799999999999 6999999999998 5999999999887 44555553 22 1 011
Q ss_pred CCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccC--CCCcEEEEcCCe-e-eccCHHHHHHHHHHcCCCeEE
Q 010922 141 GDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNR--NIENVAILCGDH-L-YRMDYMDFIQSHVDRDADITI 216 (497)
Q Consensus 141 ~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~--~~e~~LVl~gD~-l-~~~dl~~ll~~h~~~~a~~tl 216 (497)
. ..+...... .|++++++.+...+... .. ..+.+++++||+ + ...++..+++.|.+.++ .+
T Consensus 74 ~-~~~~~~~~~-----------~~~~~~i~~~l~~~~~~-~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~ 138 (236)
T 2vsh_A 74 K-ERIIITKGG-----------ADRNTSIKNIIEAIDAY-RPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VD 138 (236)
T ss_dssp G-GGEEEEECC-----------SSHHHHHHHHHHHHHHH-SCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EE
T ss_pred c-CceEEECCC-----------CchHHHHHHHHHHHHhh-ccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EE
Confidence 1 012222110 47899999988777410 01 136789999998 4 45689999999987655 34
Q ss_pred EEeeeCCCCCCcceEEEECCCC-CEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhh
Q 010922 217 SCAAVGESRASDYGLVKIDNMG-RIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWR 295 (497)
Q Consensus 217 ~~~~~~~~~~~~~g~v~~d~~g-~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~ 295 (497)
++.+..+ + +..+++| ++..+.+++.. ......|+|+++.|..+++..
T Consensus 139 ~~~~~~~--~-----~~~~~~g~~~~~~~~~~~~-------------------------~~~~~p~~f~~~~l~~~~~~~ 186 (236)
T 2vsh_A 139 TVVEAVD--T-----IVESTNGQFITDIPNRAHL-------------------------YQGQTPQTFRCKDFMDLYGSL 186 (236)
T ss_dssp EEEECCS--C-----EEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTC
T ss_pred EEEeccc--c-----EEEeCCCCeeeeecChHHh-------------------------eeecCCcEecHHHHHHHHHHH
Confidence 4445443 2 2234567 77777665321 011237899999887666542
Q ss_pred CCCCCch-hhhhHHhhhc-cCceEEEEeccEEEecCCHHHHHHHHHHhh
Q 010922 296 YPTSNDF-GSEIIPAAIM-EHDVQAYIFRDYWEDIGTIKSFYEANMALT 342 (497)
Q Consensus 296 ~~~~~d~-~~~ii~~li~-~~~v~~~~~~g~w~dIgt~~~y~~An~~l~ 342 (497)
... ..+ ..+.+..+.. ..++..+..+++|.||+||+||..|+..+.
T Consensus 187 ~~~-g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~~ 234 (236)
T 2vsh_A 187 SDE-EKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIE 234 (236)
T ss_dssp CHH-HHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHTC
T ss_pred Hhc-CCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHhh
Confidence 111 011 2222333333 357888888889999999999999987653
No 32
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.82 E-value=5.2e-19 Score=186.69 Aligned_cols=344 Identities=10% Similarity=0.075 Sum_probs=211.6
Q ss_pred CceEEEEecCCCCCcccCCCCCCCCcccccc-CcccchhHhHHHHHhc----C--CcEEEEEcccChhHHHHHHHhcccC
Q 010922 63 GVAYAVMTSKHPNEVMTLAPPRAATPAVPVA-GCYRLIDIPMSNCINS----G--INKIFVLTQFNSASLNRHIARTYFG 135 (497)
Q Consensus 63 ~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~-g~p~LId~~L~~l~~~----G--I~~I~Iv~~~~~~~l~~~l~~~y~~ 135 (497)
..|.+||||+|.||||. ...||||+||. |+ |++++.++++... | +.-+++...+.++.+.+|+.+.
T Consensus 78 ~k~~vviLAGGlGTRLg---~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~--- 150 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKY--- 150 (469)
T ss_dssp TTEEEEEEECCBSGGGT---CCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGG---
T ss_pred ccceEEEEcCCccccCC---CCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhc---
Confidence 57899999999999984 68999999999 99 6999999999887 6 5555555556688888888642
Q ss_pred CCcccCCCeEEEe-eCc--------c----CCC--CCCCccccChHHHHHHHHH--HhhhhccCCCCcEEEEcCCeeecc
Q 010922 136 NGTNFGDGFVEVL-AAT--------Q----TPG--ESGKNWFQGTADAVRQFTW--VFEDAKNRNIENVAILCGDHLYRM 198 (497)
Q Consensus 136 ~g~~~~~~~VeIl-~~~--------~----~~~--e~~~~~~~GTa~aL~~~~~--~i~~~~~~~~e~~LVl~gD~l~~~ 198 (497)
..||.. |.++ +.. . .+. ..-...+.|||++++.+.. .+++......++|+|+++|.+...
T Consensus 151 --~~fG~~-I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~ 227 (469)
T 2icy_A 151 --TNSNVD-IHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAI 227 (469)
T ss_dssp --TTSSSC-EEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCC
T ss_pred --ccCCce-EEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcc
Confidence 123321 3321 100 0 000 0001235899999986421 122111234689999999999875
Q ss_pred CHHHHHHHHHHcCCCeEEEEeeeCCCCCCcceEEEECCCCC--EEEEeecCCccccccccccccccCCCccccccCCccc
Q 010922 199 DYMDFIQSHVDRDADITISCAAVGESRASDYGLVKIDNMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVA 276 (497)
Q Consensus 199 dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d~~g~--V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 276 (497)
....++.+|.++++++++.+.+..++ ...||++... +|+ ++++.|+|....... -+ .......
T Consensus 228 ~d~~ll~~~~~~~a~~t~~v~~k~~~-~~~~Gvl~~~-dg~~~vvE~~e~p~~~~~e~--k~-----------~~~~~~~ 292 (469)
T 2icy_A 228 VDLTILKHLIQNKNEYCMEVTPKTLA-DVKGGTLISY-EGKVQLLEIAQVPDEHVNEF--KS-----------IEKFKIF 292 (469)
T ss_dssp CCHHHHHHHHHHTCSEEEEEEECCTT-CCSSCEEEEE-TTEEEEECGGGSCGGGHHHH--HS-----------SSSCCEE
T ss_pred cCHHHHHHHHHcCCCeeEEEEEeccC-CCceeEEEEE-CCEEEEEEEeccChhhhhhh--cc-----------cccccee
Confidence 44489999999999999999887652 1368987753 344 666667766421100 00 0022466
Q ss_pred eeeEEEEcHHHHHHHHhhhC---CC--------------CCchhhhhHHhhhccCceEEEEe-ccEEEecCCHHHHHHHH
Q 010922 277 SMGVYVFKKDVLFKLLRWRY---PT--------------SNDFGSEIIPAAIMEHDVQAYIF-RDYWEDIGTIKSFYEAN 338 (497)
Q Consensus 277 ~~Giyif~~~vL~~ll~~~~---~~--------------~~d~~~~ii~~li~~~~v~~~~~-~g~w~dIgt~~~y~~An 338 (497)
++|+|+|++++|.++++... +. .+.|+.++++.+ .+..++.+ ..+|.++.+..+|+.+.
T Consensus 293 N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~---~~~~~~~V~R~~F~PvKn~~dll~~~ 369 (469)
T 2icy_A 293 NTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF---DNAIGVNVPRSRFLPVKASSDLLLVQ 369 (469)
T ss_dssp EEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGS---TTCEEEECCGGGCCBCCSHHHHHHHH
T ss_pred eEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhc---CCeEEEEechhHcCcCCCHHHHHHHH
Confidence 99999999999988776521 10 112222333222 35566655 45899999999999999
Q ss_pred HHhhcCCCCccccCCCCCCCCCCccCCCeEEcC--eEeec--eEECCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeC
Q 010922 339 MALTKESPAFHFYDPKTPFYTSPRFLPPTKIDN--CRIKD--AIISHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLG 414 (497)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~--~~i~~--s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~ 414 (497)
.++..........++... ..+.|-+++++ .+|.+ ...-+-..|-+| .+=+|--++..|.++++++++++.
T Consensus 370 s~l~~~~~g~~~~~~~~~----~~~~P~v~l~~~~~~v~~f~~rf~~~p~~~~~--~~l~v~gdv~fg~~v~l~G~v~i~ 443 (469)
T 2icy_A 370 SDLYTLVDGFVTRNKART----NPSNPSIELGPEFKKVATFLSRFKSIPSIVEL--DSLKVSGDVWFGSSIVLKGKVTVA 443 (469)
T ss_dssp STTEEEETTEEEECTTCC----SSSCCEEEECGGGCSHHHHHHTBSSCCBCTTE--EEEEEESEEEECSSCEEEEEEEEE
T ss_pred HHHHHHhcCcEEecCccc----CCCCCeEEcChhhhhHHHHHHhcCCCcccccC--CeEEEEeeeEEcCCcEEEEEEEEE
Confidence 874432211111222211 11223333321 11111 112222223333 455677788999999999999886
Q ss_pred CccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEE
Q 010922 415 ADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKI 454 (497)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~I 454 (497)
++ ...++.|.+|+.++|++|..|.+|
T Consensus 444 ~~--------------~~~~~~ip~g~~l~~~~~~~~~~~ 469 (469)
T 2icy_A 444 AK--------------SGVKLEIPDRAVVENKNINGPEDL 469 (469)
T ss_dssp CC--------------TTCEEEECTTCEEESCEECCC---
T ss_pred cC--------------CCCeeecCCCCEeecceeeccCCC
Confidence 52 223578999999999998877665
No 33
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.81 E-value=1.6e-20 Score=194.17 Aligned_cols=263 Identities=12% Similarity=0.115 Sum_probs=137.3
Q ss_pred CcEEEEcCCeeecc--CHHHHHHHHHHcCCCeEEEEeeeCCCCCCcceEEEECC--CCCEEEEeecCCcccccccccccc
Q 010922 185 ENVAILCGDHLYRM--DYMDFIQSHVDRDADITISCAAVGESRASDYGLVKIDN--MGRIAQFAEKPSGANLKAMQVDTS 260 (497)
Q Consensus 185 e~~LVl~gD~l~~~--dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d~--~g~V~~~~EKp~~~~~~~~~~~~~ 260 (497)
..=|+--|||+|+| +|.+|+++|. +|+.. .+.++.||+..+|+ +++| .|.|||+.+..
T Consensus 11 ~~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~-------- 72 (374)
T 2iu8_A 11 SSGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKH-------- 72 (374)
T ss_dssp ----------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHH--------
T ss_pred ccCcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhh--------
Confidence 34577889999998 9999999985 36654 22356788888874 4566 99999985421
Q ss_pred ccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCchhhhhHHhhhccCceEEEEeccEEEec--CCHHHHHHHH
Q 010922 261 LLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSNDFGSEIIPAAIMEHDVQAYIFRDYWEDI--GTIKSFYEAN 338 (497)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d~~~~ii~~li~~~~v~~~~~~g~w~dI--gt~~~y~~An 338 (497)
..+.++|+|+|+++++..+. +| .+++| ++.+....+|.+..+|+|. .++.
T Consensus 73 ------------~~~~~aGiyI~~~~~l~~~~--------~~-~~~~p-l~~~~~~~a~~~~~~~~~~~i~~~~------ 124 (374)
T 2iu8_A 73 ------------LKSSEAGAIIISRTQFQKYR--------DL-NKNFL-ITSESPSLVFQKCLELFITPVDSGF------ 124 (374)
T ss_dssp ------------HHTCCCSEEEEEHHHHHTST--------TS-CSCEE-EESSCHHHHHHHHHTTTSCCCCCSC------
T ss_pred ------------hhcCCcEEEEeChhHhhhcc--------cc-ccceE-EEeCCHHHHHHHHHHHhcccccccc------
Confidence 14679999999999874211 12 45666 6555555555555566553 2211
Q ss_pred HHhhcCCCCccccCCCCCCCCCCccCCCeEEc-CeEe------e-ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEc
Q 010922 339 MALTKESPAFHFYDPKTPFYTSPRFLPPTKID-NCRI------K-DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELK 408 (497)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i------~-~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~ 408 (497)
...+...++++.+.+...+.+.|++.|. +++| . ++.|+++|.|+ +|.|. +++|+.+++||++|.|.
T Consensus 125 ----~~i~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~ 200 (374)
T 2iu8_A 125 ----PGIHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQ 200 (374)
T ss_dssp ----CSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred ----CccCCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEEC
Confidence 0111122344555555555555555543 2333 1 23333333333 12222 33333333333333333
Q ss_pred ceEEeCCc---------------------cccchhHH--HHhhcCC-CcceEeCCCcEee-ceEEcCCCEECCCcEEcCC
Q 010922 409 DTVMLGAD---------------------YYQTESEI--ASLLAEG-KVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVNK 463 (497)
Q Consensus 409 ~s~i~~~~---------------------~~~~~~~~--~~~~~~~-~~~~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~ 463 (497)
....++.+ .++..++| .+.+..| --.+.||++++|. .+.|++|++||++++|.+.
T Consensus 201 ~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~~~~~~t~ig~~~~i~~~v~I~~~v~IG~~~~i~~~ 280 (374)
T 2iu8_A 201 PGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQ 280 (374)
T ss_dssp TTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEECSSSCEEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred CCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEccCcccceeECCCcEECCccccCCccEECCCCEEccC
Confidence 22222111 00111111 0011000 0013344444443 4677888999999999888
Q ss_pred CCCCCCCCCCCCeEEccccEE-----EccCcEECCCccC
Q 010922 464 DDVQEADRPELGFYIRSGITI-----IMEKATIEDGMVI 497 (497)
Q Consensus 464 ~~v~~~~~~~~~~~i~~g~~v-----i~~~~~i~~g~~i 497 (497)
.++...+.+++++.|+.+..+ ||++++|++|++|
T Consensus 281 ~~v~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~I~a~s~V 319 (374)
T 2iu8_A 281 AGIAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGV 319 (374)
T ss_dssp CEECTTCEECSSCEECTTCEECSSCEECTTEEECTTCEE
T ss_pred cccCCCcEECCCeEEecCcEECCCcccCCCcEEccCcee
Confidence 888888888888888777643 6777777777764
No 34
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.80 E-value=5.9e-19 Score=171.90 Aligned_cols=229 Identities=12% Similarity=0.093 Sum_probs=153.2
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcC-CcEEEEEcccChhHHHHHHHhcccCCCcccCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFGD 142 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~G-I~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~ 142 (497)
++.|||||+|.|+||.+ ..+||+|+|++|+ |||+|+++.+.+++ +++|+|++++......+.+.+.|...
T Consensus 3 ~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~~------ 73 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISD------ 73 (246)
T ss_dssp CEEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCCC------
T ss_pred ccEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCCC------
Confidence 46899999999999986 5789999999999 69999999999998 99999999987654333333444211
Q ss_pred CeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhcc-CCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEe
Q 010922 143 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKN-RNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCA 219 (497)
Q Consensus 143 ~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~-~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~ 219 (497)
..+.++... .+..++++.++..+.+... ...+.+|++.||. +....+.++++.|.+.++ .+.+.
T Consensus 74 ~~~~~~~~~-----------~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a--~i~~~ 140 (246)
T 3f1c_A 74 DRIVVIEGG-----------EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA--VDTVI 140 (246)
T ss_dssp TTEEEEECC-----------SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSE--EEEEE
T ss_pred CCEEEECCC-----------CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEEE
Confidence 124554321 3678899999888862100 1247899999997 456689999999988765 34444
Q ss_pred eeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCC
Q 010922 220 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTS 299 (497)
Q Consensus 220 ~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~ 299 (497)
+..+ .++..++++.|..+.+|+... ..-.-++|+.+.|.+.++......
T Consensus 141 ~~~d------~i~~~~~~~~v~~~~~r~~l~-------------------------~~qtpq~f~~~~L~~a~~~~~~~~ 189 (246)
T 3f1c_A 141 EALD------TIVESSNHEVITDIPVRDHMY-------------------------QGQTPQSFNMKKVFNHYQNLTPEK 189 (246)
T ss_dssp ECSS------CEEECSSSSBCCBCCCGGGEE-------------------------EEEEEEEEEHHHHHHHHHTSCHHH
T ss_pred eccc------eEEEecCCCeEEEecChHHhh-------------------------hhcCCceeEHHHHHHHHHHHHHcC
Confidence 4433 344444556666666654421 111346999998877776532111
Q ss_pred CchhhhhHHhhhcc-CceEEEEeccEEEecCCHHHHHHHHHHhhcCC
Q 010922 300 NDFGSEIIPAAIME-HDVQAYIFRDYWEDIGTIKSFYEANMALTKES 345 (497)
Q Consensus 300 ~d~~~~ii~~li~~-~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~~ 345 (497)
..+.+|.+..+.+. .++..+..+.+|.+|+||+||..|+..+.++.
T Consensus 190 ~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 190 KQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI 236 (246)
T ss_dssp HHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC
T ss_pred CCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhccc
Confidence 22345555544443 68999999999999999999999998876553
No 35
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.78 E-value=2.7e-18 Score=163.72 Aligned_cols=213 Identities=15% Similarity=0.067 Sum_probs=148.3
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcC-CcEEEEEcccChhH-HHHHHHhcccCCCcccCC
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSAS-LNRHIARTYFGNGTNFGD 142 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~G-I~~I~Iv~~~~~~~-l~~~l~~~y~~~g~~~~~ 142 (497)
|.|||||+|.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++.... +.+++ . + .+
T Consensus 3 ~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~-----~-~--~~- 69 (223)
T 2xwl_A 3 TVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVF-----G-G--ED- 69 (223)
T ss_dssp EEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHT-----C-B--TT-
T ss_pred eEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHh-----c-c--CC-
Confidence 689999999999998 3689999999999 59999999999988 99999999987643 33222 1 1 11
Q ss_pred CeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe-ee-ccCHHHHHHHHHHcCCCeEEEEee
Q 010922 143 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LY-RMDYMDFIQSHVDRDADITISCAA 220 (497)
Q Consensus 143 ~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~-l~-~~dl~~ll~~h~~~~a~~tl~~~~ 220 (497)
+.++... .+++++++.+...++ ..+.++++.||+ +. ..++..+++.|. .+.++++.+.+
T Consensus 70 --v~~~~~~-----------~~~~~~i~~al~~~~-----~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~ 130 (223)
T 2xwl_A 70 --SVIVSGG-----------VDRTESVALALEAAG-----DAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLA 130 (223)
T ss_dssp --EEEEECC-----------SSHHHHHHHHHTTCT-----TCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEEC
T ss_pred --eEEEcCC-----------CCHHHHHHHHHHhcC-----CCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEe
Confidence 4444321 367889998876662 246789999998 33 457889999883 34567776666
Q ss_pred eCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCC
Q 010922 221 VGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSN 300 (497)
Q Consensus 221 ~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~ 300 (497)
..+ +..+ .|++|++..+.|++.. ......|+|++..+..+++... .
T Consensus 131 ~~d--~~~~----~~~~g~~~~~~e~~~l-------------------------~~~~~p~~f~~~~l~~~~~~~~---~ 176 (223)
T 2xwl_A 131 PAD--TIKA----VDANGAVLGTPERAGL-------------------------RAVQTPQGFHADVLRRAYARAT---A 176 (223)
T ss_dssp CSS--CEEE----ECTTSBEEECCCGGGE-------------------------EEECSCEEEEHHHHHHHHTTCC---S
T ss_pred ccc--ceEE----EcCCCcEEeecChHHh-------------------------eeeeCCcccCHHHHHHHHHHhh---C
Confidence 554 2222 3777899888876531 0112358899988876654321 2
Q ss_pred chhhhhHHhhhc-cCceEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010922 301 DFGSEIIPAAIM-EHDVQAYIFRDYWEDIGTIKSFYEANMALTK 343 (497)
Q Consensus 301 d~~~~ii~~li~-~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~ 343 (497)
++..+....+.. ..++..+..+++|.||+||+||.+++..+.+
T Consensus 177 ~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 177 GGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp CCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 222333333322 3578888888899999999999999876654
No 36
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.77 E-value=1.5e-17 Score=159.44 Aligned_cols=219 Identities=9% Similarity=0.008 Sum_probs=133.0
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcC-CcEEEEEcccChhHHHHHHHhcccCCCcccCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFGD 142 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~G-I~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~ 142 (497)
.|.|||||+|.|+||++ ..||+|+|++|+ |||+|+++.+..++ +++|+|++++..+.+.+ +.+ + +.
T Consensus 6 ~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-~-~~------ 72 (231)
T 1vgw_A 6 KNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQT-A-FP------ 72 (231)
T ss_dssp CEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHH-H-CT------
T ss_pred ceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHh-c-CC------
Confidence 47999999999999986 589999999999 59999999999985 99999999987666655 432 2 10
Q ss_pred CeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhcc-CCCCcEEEEcCCee-e-ccCHHHHHHHHHHcCCCeEEEEe
Q 010922 143 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKN-RNIENVAILCGDHL-Y-RMDYMDFIQSHVDRDADITISCA 219 (497)
Q Consensus 143 ~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~-~~~e~~LVl~gD~l-~-~~dl~~ll~~h~~~~a~~tl~~~ 219 (497)
..++++.. ..|++++++.+...+.+... ...+.+++++||.- . ...+..+++.|.+.+. ..+++.
T Consensus 73 ~~i~~~~~-----------~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~-~~~~~~ 140 (231)
T 1vgw_A 73 QVRVWKNG-----------GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAE-GGILAV 140 (231)
T ss_dssp TSEEECCC-----------CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTT-CEEEEE
T ss_pred CceEEEcC-----------CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCC-eEEEEe
Confidence 12444321 14899999999877741000 02478999999973 3 4568889988876542 234444
Q ss_pred eeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCC
Q 010922 220 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTS 299 (497)
Q Consensus 220 ~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~ 299 (497)
+..+ . +..+++|+|....++.. .......|+|+.+.|..+++......
T Consensus 141 ~~~~--~-----~~~~~~g~i~~~~~~~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~~~g 188 (231)
T 1vgw_A 141 PVAD--T-----LKRAESGQISATVDRSG-------------------------LWQAQTPQLFQAGLLHRALAAENLGG 188 (231)
T ss_dssp ECCS--C-----EEEESSSBEEEEECCTT-------------------------EEEEEEEEEEEHHHHHHHHHC----C
T ss_pred eccc--c-----eEEeCCCceEecCChHH-------------------------heeeeCCcEecHHHHHHHHHHHhhcC
Confidence 4433 1 11124466554332210 11122489999998877665422111
Q ss_pred CchhhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHh
Q 010922 300 NDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMAL 341 (497)
Q Consensus 300 ~d~~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l 341 (497)
......++..+ ..++..+...+.|.||+||+||..|+..+
T Consensus 189 ~~~~~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 189 ITDEASAVEKL--GVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp CCSHHHHHHTT--TCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred CCcHHHHHHHc--CCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 11111222221 35777888778999999999999997654
No 37
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.77 E-value=5.6e-18 Score=162.53 Aligned_cols=215 Identities=15% Similarity=0.130 Sum_probs=145.7
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcC-CcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~G-I~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
+.|||||+|.|+||. ||+|+|++|+ |||+|+++.+.+++ +++|+|++++ +.+.+++. . ++
T Consensus 5 ~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~-~-------~~-- 65 (228)
T 1ezi_A 5 NIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAK-N-------FG-- 65 (228)
T ss_dssp EEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHH-H-------TT--
T ss_pred eEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHH-H-------cC--
Confidence 569999999999997 8999999999 59999999999998 7999999964 44555543 1 22
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee--ccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~--~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
++++....... .+..|++++++.+...+. ...+.+++++||.-+ ..++..+++.|.+.++++++.+.+.
T Consensus 66 -~~~~~~~~~~~----~~~~g~~~sv~~~l~~~~----~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 136 (228)
T 1ezi_A 66 -VEVVLRPAELA----SDTASSISGVIHALETIG----SNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPM 136 (228)
T ss_dssp -CEEEECCC----------CHHHHHHHHHHHHHT----CCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEEC
T ss_pred -CEEEeCchHHc----CCCCChHHHHHHHHHHhC----CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEec
Confidence 22221110000 012588999999988774 124679999999843 5678899998887777888888776
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCC-ccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCC
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPS-GANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSN 300 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~ 300 (497)
.+. + ++....|++|++..|.++.. .+.... ....+..+.|+|+|+++.|.+.++
T Consensus 137 ~~~-p--~~~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~~giy~~~~~~l~~~~~------- 191 (228)
T 1ezi_A 137 EHH-P--LKTLLQINNGEYAPMRHLSDLEQPRQQ---------------LPQAFRPNGAIYINDTASLIANNC------- 191 (228)
T ss_dssp SSC-T--TSCEEECC--CEEESSCHHHHTCCGGG---------------SCCEEEEEEEEEEEEHHHHHHHTS-------
T ss_pred CCC-c--ceeeEEcCCCcEeeccccccccCCccc---------------CchhheeeeEEEEEeHHHHhhCCc-------
Confidence 552 2 33333477889999876211 000000 001235678999999988764310
Q ss_pred chhhhhHHhhhccCceEEEEec-cEEEecCCHHHHHHHHHHhh
Q 010922 301 DFGSEIIPAAIMEHDVQAYIFR-DYWEDIGTIKSFYEANMALT 342 (497)
Q Consensus 301 d~~~~ii~~li~~~~v~~~~~~-g~w~dIgt~~~y~~An~~l~ 342 (497)
+ ...++.++... .+|.||+||+||..|+..+.
T Consensus 192 -~---------~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 192 -F---------FIAPTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp -S---------CCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred -c---------cCCceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 0 14467778776 58999999999999987654
No 38
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.76 E-value=3.6e-19 Score=171.85 Aligned_cols=199 Identities=12% Similarity=0.083 Sum_probs=140.5
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
|.|||||+|. |||.+.+...||+|+|++|+ |||+|+++.+.++|+ +|+|++.. +.+ +.++ +
T Consensus 3 ~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~~--~~i-----~~~~------~--- 63 (232)
T 2dpw_A 3 PSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGEN--PGL-----VPAP------A--- 63 (232)
T ss_dssp CEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESCC--SSC-----SSCC------S---
T ss_pred eeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeCh--HHH-----hhhc------C---
Confidence 7899999999 88887766689999999999 599999999999999 88887553 322 2221 2
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
+++ .. ..|++++++.+...+. +.|+|++||+ +...++..+++ | ..++++++.+.+.+
T Consensus 64 ~~~--~~----------~~g~~~~i~~a~~~~~-------~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~ 122 (232)
T 2dpw_A 64 LTL--PD----------RGGLLENLEQALEHVE-------GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKE 122 (232)
T ss_dssp EEE--CC----------CSSHHHHHHHHHHTCC-------SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHH
T ss_pred eEe--cC----------CCCHHHHHHHHHHHcC-------CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeecc
Confidence 444 11 2699999999986652 7899999999 55667889988 7 56677888777643
Q ss_pred CCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhh-----CC
Q 010922 223 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWR-----YP 297 (497)
Q Consensus 223 ~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~-----~~ 297 (497)
+. ...|+.+ .++|..+.||| .+++|+|+|++++|..+.+.. .+
T Consensus 123 ~~-~~~~~~~----~~~v~~~~ek~---------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~~~ 170 (232)
T 2dpw_A 123 AV-EARFPRT----KRTYARLREGT---------------------------FTGGNLLLLDKSLFRKALPLARRVVALR 170 (232)
T ss_dssp HH-HHHCTTC----CCCCEEETTEE---------------------------EEECSEEEEEHHHHTTTHHHHHHHHHTT
T ss_pred ch-hhhCCCc----ceeEEEEecCc---------------------------eeeeeEEEEcHHHHHHHHHHHHHHHHhc
Confidence 21 1234322 24577777663 257899999999875443211 00
Q ss_pred -------------------CCCchhhhhHHhhhcc--CceEEEEe--ccEEEecCCHHHHH
Q 010922 298 -------------------TSNDFGSEIIPAAIME--HDVQAYIF--RDYWEDIGTIKSFY 335 (497)
Q Consensus 298 -------------------~~~d~~~~ii~~li~~--~~v~~~~~--~g~w~dIgt~~~y~ 335 (497)
......++++..++.. .++..+.+ .+.|.|||||+||.
T Consensus 171 ~~P~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 171 KRPLALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp TCHHHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred cCHHHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 0123345666555543 67888888 46899999999984
No 39
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.76 E-value=3.2e-18 Score=163.95 Aligned_cols=219 Identities=11% Similarity=0.029 Sum_probs=138.0
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhc-CCcEEEEEcccChhHHHHHHHhcccCCCcccCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINS-GINKIFVLTQFNSASLNRHIARTYFGNGTNFGD 142 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~-GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~ 142 (497)
.|.|||||+|.|+||. ..+||+|+|++|+ |||+|+++.+.++ |+++|+|++++..+.+.+++.+ .++.
T Consensus 4 ~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~-------~~~~ 72 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEE-------SIDV 72 (228)
T ss_dssp CEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTT-------TSSS
T ss_pred ceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHH-------hCCC
Confidence 4789999999999996 3589999999999 5999999999998 8999999999887655544432 2221
Q ss_pred CeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe-e-eccCHHHHHHHHHHcCCCeEEEEee
Q 010922 143 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-L-YRMDYMDFIQSHVDRDADITISCAA 220 (497)
Q Consensus 143 ~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~-l-~~~dl~~ll~~h~~~~a~~tl~~~~ 220 (497)
.++++... .|..++++.+...+.+ ..+.++++.||. + ...++..+++.|.+.++ ++++.+
T Consensus 73 -~v~~~~~~-----------~~~~~sv~~al~~~~~----~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~~~ 134 (228)
T 2yc3_A 73 -DLSFAIPG-----------KERQDSVYSGLQEIDV----NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLGVP 134 (228)
T ss_dssp -EEEEECCC-----------SSHHHHHHHHHTTSCT----TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEEEE
T ss_pred -cEEEECCC-----------CCHHHHHHHHHHhhcc----CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEEEe
Confidence 24444311 4888999998876641 235788999996 3 35578999998877653 454554
Q ss_pred eCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCC
Q 010922 221 VGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSN 300 (497)
Q Consensus 221 ~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~ 300 (497)
..+. +..+|+++.+..+.+++. ..... ..|+|+++.|.+.++....+.
T Consensus 135 ~~~~------~~~~~~~~~v~~~~~~~~------------------------~~~~~-~~~~f~~~~l~~~~~~~~~~~- 182 (228)
T 2yc3_A 135 AKAT------IKEVNSDSLVVKTLDRKT------------------------LWEMQ-TPQVIKPELLKKGFELVKSEG- 182 (228)
T ss_dssp CCSC------CCCBCTTSCBCCCCSCCC------------------------CEEEE-EEEEECHHHHHHHHHHHHHHT-
T ss_pred ccce------EEEEcCCCceEEecCccc------------------------eEEEe-CCcEEEHHHHHHHHHHHHhcC-
Confidence 4331 112344445543322211 01223 389999887766554321111
Q ss_pred chhhhhHHhhhc-cCceEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010922 301 DFGSEIIPAAIM-EHDVQAYIFRDYWEDIGTIKSFYEANMALTK 343 (497)
Q Consensus 301 d~~~~ii~~li~-~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~ 343 (497)
.+..+.+..+.+ ..++..+.-...|.||+||+||..|+..+.+
T Consensus 183 ~~~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 226 (228)
T 2yc3_A 183 LEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE 226 (228)
T ss_dssp CCCCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred CCcccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHHhh
Confidence 122334444433 3566544545679999999999999876543
No 40
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.72 E-value=4.2e-16 Score=165.40 Aligned_cols=341 Identities=12% Similarity=0.109 Sum_probs=200.8
Q ss_pred cCCCceEEEEecCCCCCcccCCCCCCCCcccccc-CcccchhHhHHHHHhc----CCc-EEEEEcc-cChhHHHHHHHhc
Q 010922 60 VKPGVAYAVMTSKHPNEVMTLAPPRAATPAVPVA-GCYRLIDIPMSNCINS----GIN-KIFVLTQ-FNSASLNRHIART 132 (497)
Q Consensus 60 ~~~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~-g~p~LId~~L~~l~~~----GI~-~I~Iv~~-~~~~~l~~~l~~~ 132 (497)
.....+.+||||||.||||. ...||+|+||. |+ ||++++++++... |.. .++|+++ +.++.+.+++.+
T Consensus 88 ~~~~k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~- 162 (488)
T 2i5k_A 88 SNLSKLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKK- 162 (488)
T ss_dssp TTGGGEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGG-
T ss_pred hhcCCceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHh-
Confidence 34567889999999999996 57899999999 99 5999999999876 643 4667677 778888888854
Q ss_pred ccCCCcccCCCeEEEe-eC--------cc----CCCC--CCCccccChHHHHHHH-----HHHhhhhccCCCCcEEEEcC
Q 010922 133 YFGNGTNFGDGFVEVL-AA--------TQ----TPGE--SGKNWFQGTADAVRQF-----TWVFEDAKNRNIENVAILCG 192 (497)
Q Consensus 133 y~~~g~~~~~~~VeIl-~~--------~~----~~~e--~~~~~~~GTa~aL~~~-----~~~i~~~~~~~~e~~LVl~g 192 (497)
+ ..|+.. |..+ +. .. .+.. .-...+.|||++++.. ++.+. ....++++|++|
T Consensus 163 ~----~~fg~~-i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~---~~g~~~v~V~ng 234 (488)
T 2i5k_A 163 Y----SANRIR-IRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALI---AQGREILFVSNG 234 (488)
T ss_dssp G----CSSSCE-EEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHH---HTTCCEEEEECT
T ss_pred c----cccCce-EEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHH---hcCCCEEEEEeC
Confidence 2 123321 2211 11 00 0000 0012357999999843 23332 234689999999
Q ss_pred Ceeec-cCHHHHHHHHHHcCCCeEEEEeeeCCCCCC-cceEEEECCCCC--EEEEeecCCccccccccccccccCCCccc
Q 010922 193 DHLYR-MDYMDFIQSHVDRDADITISCAAVGESRAS-DYGLVKIDNMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQE 268 (497)
Q Consensus 193 D~l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~-~~g~v~~d~~g~--V~~~~EKp~~~~~~~~~~~~~~~~~~~~~ 268 (497)
|++.. .|+. ++..|.++++++++.+.+.++ +. .||.+..+ +|+ |+++.+.|....... + +
T Consensus 235 DnL~~~~d~~-~L~~~~~~~a~~t~~v~~~~~--p~~~yG~Iv~~-dG~~~iVE~~e~~~e~~~~~---~---------~ 298 (488)
T 2i5k_A 235 DNLGATVDLK-ILNHMIETGAEYIMELTDKTR--ADVKGGTLISY-DGQVRLLEVAQVPKEHIDEF---K---------N 298 (488)
T ss_dssp TBSSCCCCHH-HHHHHHHSCCSEEEEEEECCG--GGSSSCEEEEE-TTEEEEECGGGSCTTSHHHH---T---------C
T ss_pred CcCCCcccHH-HHHHHHhcCCcEEEEEEEecC--CCCceeEEEEE-CCcEEEEEeccCCHHHHhhc---c---------c
Confidence 99886 4775 668999999999999988765 43 49987764 465 333333443221100 0 0
Q ss_pred cccCCccceeeEEEEcHHHHHHHHhhhC---CC-----C-------------CchhhhhHHhhhccCceEEEEec-cEEE
Q 010922 269 ARKCPYVASMGVYVFKKDVLFKLLRWRY---PT-----S-------------NDFGSEIIPAAIMEHDVQAYIFR-DYWE 326 (497)
Q Consensus 269 ~~~~~~l~~~Giyif~~~vL~~ll~~~~---~~-----~-------------~d~~~~ii~~li~~~~v~~~~~~-g~w~ 326 (497)
.......++|+|+|+.+.|.+.++... |. . +.|..++++.+ .+..++... .-+.
T Consensus 299 -~~~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~---~~~~~~~V~R~~F~ 374 (488)
T 2i5k_A 299 -IRKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF---DGAHGVVVPRSRFL 374 (488)
T ss_dssp -TTTCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGS---SSCEEEEECGGGCC
T ss_pred -ccccCEEEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhc---cCceEEEecccccc
Confidence 001246699999999999988877522 10 0 11222333322 234444442 2355
Q ss_pred ecCCHHHHHHHHHHhhcCCCCccccCCCCCCCCCCccCCCeEEcC--eEeec--eEECCCCEEcceEEeeeEEcCCcEEC
Q 010922 327 DIGTIKSFYEANMALTKESPAFHFYDPKTPFYTSPRFLPPTKIDN--CRIKD--AIISHGCFLRECTVEHSIVGERSRLD 402 (497)
Q Consensus 327 dIgt~~~y~~An~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~--~~i~~--s~I~~~~~i~~~~v~~svIg~~~~i~ 402 (497)
.+-+..+++-+..++..........++.. ..+.|-+.+.+ .++.+ ..+.....|-++ .+=+|--++..|
T Consensus 375 PvKn~~~ll~~~~~~~~~~~g~~~~~~~~-----~e~~P~v~~~~~~~~~~~~~~rf~~~p~i~~~--~~l~v~Gdv~fg 447 (488)
T 2i5k_A 375 PVKTCSDLLLVKSDLFRLEHGSLKLDPSR-----FGPNPLIKLGSHFKKVSGFNARIPHIPKIVEL--DHLTITGNVFLG 447 (488)
T ss_dssp BCCSHHHHHHHTSTTEEEETTEEEECTTC-----CSSCCEEEECGGGSSHHHHHHHCSSCCBCTTE--EEEEEESSEEEC
T ss_pred cccCCccHHHHHHHHHHHhcCcEeecCCc-----CCCCCeEEECCcccchhhHHhhcCCCcccccc--ceEEEEeeeEEc
Confidence 66666555433332221111111112211 12233333332 11111 112222333333 345777788899
Q ss_pred CCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEE
Q 010922 403 YGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKI 454 (497)
Q Consensus 403 ~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~I 454 (497)
.++.+++++++.++ ...++.|.+|+.++|++|..|.+|
T Consensus 448 ~~v~l~G~v~i~a~--------------~~~~~~ip~g~~l~n~~~~~~~~~ 485 (488)
T 2i5k_A 448 KDVTLRGTVIIVCS--------------DGHKIDIPNGSILENVVVTGNLQI 485 (488)
T ss_dssp TTCEEEEEEEEECC--------------TTCCEEECTTCEEEEEEEEEEEEE
T ss_pred CCcEEEEEEEEEcC--------------CCCeEEeCCCCEEecceeeccccc
Confidence 99999999887552 123489999999999988877776
No 41
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.67 E-value=5e-16 Score=149.37 Aligned_cols=214 Identities=14% Similarity=0.148 Sum_probs=134.0
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcC-CcEEEEEcccChhHHHHHHHhcccCCCcccCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFGD 142 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~G-I~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~ 142 (497)
.+.|||||+|.|+||. +|+|+|++|+ |||+|+++.+.++| +++|+|++. .+.+.+++.+ ++
T Consensus 3 ~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~--------~g- 64 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ--------FG- 64 (229)
T ss_dssp CEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH--------TT-
T ss_pred cEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH--------cC-
Confidence 3689999999999994 4999999999 59999999999998 699999984 4556666532 22
Q ss_pred CeEEEee-CccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee--ccCHHHHHHHHHHcCCCeEEEEe
Q 010922 143 GFVEVLA-ATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDRDADITISCA 219 (497)
Q Consensus 143 ~~VeIl~-~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~--~~dl~~ll~~h~~~~a~~tl~~~ 219 (497)
++++. +..... . ..+..++++.+...+. ..+.+++++||.-+ ..++..+++.|.+.+++.++.+.
T Consensus 65 --~~~~~~~~~~~~----~-~~~~~~~v~~al~~~~-----~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~ 132 (229)
T 1qwj_A 65 --AQVHRRSSETSK----D-SSTSLDAIVEFLNYHN-----EVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVV 132 (229)
T ss_dssp --CEEEECCGGGSS----T-TCCHHHHHHHHHTTCT-----TCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEE
T ss_pred --CEEEeChhhhcC----C-CCcHHHHHHHHHHhcC-----CCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 23322 111000 0 1244588888876552 24789999999843 45789999999888887666555
Q ss_pred eeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCC
Q 010922 220 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTS 299 (497)
Q Consensus 220 ~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~ 299 (497)
+..+ +..+.+ .| + +..|.+++....... + .+. . ....+..++|+|+|+++.| ++.
T Consensus 133 ~~~~--p~~~~v--~~--~-~~~~~~~~~~~~~~~---~-----~~~-~-~~~~~~~n~giY~~~~~~l---~~~----- 187 (229)
T 1qwj_A 133 RRHQ--FRWSEI--QK--G-VREVTEPLNLNPAKR---P-----RRQ-D-WDGELYENGSFYFAKRHLI---EMG----- 187 (229)
T ss_dssp EECC--CEECCC--CS--S-TTCCCCBSSSBTTBC---C-----CTT-T-SCCEEEEEEEEEEEEHHHH---HTT-----
T ss_pred eccC--hhHhhc--cc--c-ccccccccccccccc---c-----CCC-C-CCceEEEeeEEEEEEHHHh---ccc-----
Confidence 4433 323332 22 2 212322111000000 0 000 0 0012567999999999987 111
Q ss_pred CchhhhhHHhhhccCceEEE-Eec-cEEEecCCHHHHHHHHHHhhc
Q 010922 300 NDFGSEIIPAAIMEHDVQAY-IFR-DYWEDIGTIKSFYEANMALTK 343 (497)
Q Consensus 300 ~d~~~~ii~~li~~~~v~~~-~~~-g~w~dIgt~~~y~~An~~l~~ 343 (497)
+.....+ .| ..+ ++|.|||||+||..|+..+..
T Consensus 188 ----------~~~g~~~-~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 188 ----------YLQGGKM-AYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp ----------CSSCSSE-EEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred ----------cccCCeE-EEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 1122334 44 554 699999999999999877654
No 42
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=1.5e-16 Score=148.79 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=93.4
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
|+|||||+|.|+||.| +||+|+|++|+ |||+|+++.+.++|+++|+|++++..+.+.+++.+.| . +. ..
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~-~----~~-~~ 69 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAY-K----DY-KN 69 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHT-T----TT-TE
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhc-c----CC-CC
Confidence 7899999999999988 89999999999 5999999999999999999999998888888886533 1 11 12
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHH-----cCCCeEEE
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVD-----RDADITIS 217 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~-----~~a~~tl~ 217 (497)
+.++... ..|++++++.+...+ .+.++++.||+ +....+..+++.|.+ .+.+..+.
T Consensus 70 ~~~~~~~----------~~g~~~si~~al~~~-------~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~ 132 (196)
T 3rsb_A 70 IVVIDTS----------GKGYIEDLNECIGYF-------SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAV 132 (196)
T ss_dssp EEE------------------CCCCCTTTTTC-------SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEE
T ss_pred EEEEECC----------CCCcHHHHHHHHHhC-------CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEE
Confidence 4444321 157888888776544 37899999999 446789999999987 66666666
Q ss_pred EeeeC
Q 010922 218 CAAVG 222 (497)
Q Consensus 218 ~~~~~ 222 (497)
+.+..
T Consensus 133 ~~p~~ 137 (196)
T 3rsb_A 133 MIPKE 137 (196)
T ss_dssp EEETT
T ss_pred EEEcc
Confidence 66544
No 43
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.66 E-value=1.3e-15 Score=146.85 Aligned_cols=217 Identities=10% Similarity=0.071 Sum_probs=138.0
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcC-CcEEEEEcccChhHHHHHHHhcccCCCcccCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTNFGD 142 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~G-I~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~ 142 (497)
.|.|||||+|.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ + .. ++.
T Consensus 7 ~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~-~~-------~~~ 73 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-L-PL-------ANH 73 (236)
T ss_dssp CEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-S-GG-------GGC
T ss_pred ceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-H-Hh-------cCC
Confidence 3799999999999997 3579999999999 59999999999987 89999999987554433 2 11 111
Q ss_pred CeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee-c-cCHHHHHHHHHHcCCCeEEEEee
Q 010922 143 GFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-R-MDYMDFIQSHVDRDADITISCAA 220 (497)
Q Consensus 143 ~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~-~-~dl~~ll~~h~~~~a~~tl~~~~ 220 (497)
..+.++... .|..++++.+...+. ..+.+++++||+.+ . ..+..+++.+.+.++.. +.+.+
T Consensus 74 ~~v~~~~~~-----------~g~~~~i~~al~~~~-----~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~ 136 (236)
T 1i52_A 74 PQITVVDGG-----------DERADSVLAGLKAAG-----DAQWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAP 136 (236)
T ss_dssp TTEEEEECC-----------SSHHHHHHHHHHTST-----TCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEE
T ss_pred CCEEEECCC-----------CCHHHHHHHHHHhcC-----CCCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEe
Confidence 124444321 378899998877663 24689999999843 3 46788888776654333 33334
Q ss_pred eCCCCCCcceEEEECCC-CCEEEEeecCCccccccccccccccCCCccccccCCccce-eeEEEEcHHHHHHHHhhhCCC
Q 010922 221 VGESRASDYGLVKIDNM-GRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVAS-MGVYVFKKDVLFKLLRWRYPT 298 (497)
Q Consensus 221 ~~~~~~~~~g~v~~d~~-g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Giyif~~~vL~~ll~~~~~~ 298 (497)
..+ ++...+++ |++....+. ..++. -+.++|+.+.|...++.....
T Consensus 137 ~~~------~~~~~~~~~~~i~~~~~~--------------------------~~i~~~~~p~~f~~~~l~~~~~~~~~~ 184 (236)
T 1i52_A 137 VRD------TMKRAEPGKNAIAHTVDR--------------------------NGLWHALTPQFFPRELLHDCLTRALNE 184 (236)
T ss_dssp CCS------CEEEECTTSSSEEEEECC--------------------------TTCEEEEEEEEEEHHHHHHHHHHHHHT
T ss_pred ccc------cEEEEcCCCCceeeccCh--------------------------HhheeeeCCceecHHHHHHHHHHHHhc
Confidence 332 11112444 455432211 01222 256678887776655442111
Q ss_pred CCch--hhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHhhcC
Q 010922 299 SNDF--GSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTKE 344 (497)
Q Consensus 299 ~~d~--~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~~ 344 (497)
...+ ...++..+ ..++..+...+.|.||+||+||..|+..+.++
T Consensus 185 g~~~td~~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~ 230 (236)
T 1i52_A 185 GATITDEASALEYC--GFHPQLVEGRADNIKVTRPEDLALAEFYLTRT 230 (236)
T ss_dssp TCCCCSHHHHHHHT--TCCCEEEECCTTCCCCCSHHHHHHHHHHHCC-
T ss_pred CCCcccHHHHHHHc--CCCEEEEecCccccccCCHHHHHHHHHHHHHh
Confidence 1111 11222221 35677787778999999999999998876543
No 44
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.66 E-value=5.9e-16 Score=144.46 Aligned_cols=187 Identities=11% Similarity=0.117 Sum_probs=128.3
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
.|.|||||+|.|+||. .||+|+|++|+ |||+|+++.+.++|+++|+|++++..+.+.+++. . ++
T Consensus 5 ~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~-----~---~~-- 68 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVE-----L---DG-- 68 (199)
T ss_dssp CEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSC-----C---TT--
T ss_pred ceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhc-----c---CC--
Confidence 3789999999999995 69999999999 6999999999999999999999987766655542 1 22
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee--ccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~--~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
++++.... +..|++++++.+...+. ...+.+++++||+.+ ..++..+++. +.++++++...
T Consensus 69 -~~~~~~~~--------~~~g~~~~i~~al~~~~----~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~-- 131 (199)
T 2waw_A 69 -LDIVLVDD--------AGLGCSSSLKSALTWVD----PTAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY-- 131 (199)
T ss_dssp -SEEEECCC--------CCTTCCCHHHHHHHTSC----TTCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE--
T ss_pred -CEEEECCC--------cccCHHHHHHHHHHhhh----ccCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec--
Confidence 23443211 23689999999987763 124789999999955 5577888876 44554433211
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCc
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 301 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d 301 (497)
+ |+ +. .-++|+++.|..+.+ . .....
T Consensus 132 -------------~--g~-------~~------------------------------~P~~~~~~~l~~~~~-~-~~~~~ 157 (199)
T 2waw_A 132 -------------A--NG-------IG------------------------------HPFWVSRGVFGDLAE-L-HGDKG 157 (199)
T ss_dssp -------------T--TE-------EE------------------------------EEEEEEGGGHHHHHT-C-SSTTC
T ss_pred -------------C--Cc-------cc------------------------------CCEEEcHHHHHHHHh-c-CCCHH
Confidence 1 10 00 014788888876542 1 11111
Q ss_pred hhhhhHHhhhcc--CceEEEEe-ccEEEecCCHHHHHHHHHHhh
Q 010922 302 FGSEIIPAAIME--HDVQAYIF-RDYWEDIGTIKSFYEANMALT 342 (497)
Q Consensus 302 ~~~~ii~~li~~--~~v~~~~~-~g~w~dIgt~~~y~~An~~l~ 342 (497)
+..++++ .++..+.+ .++|.||+||+||..++..+.
T Consensus 158 -----~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~~ 196 (199)
T 2waw_A 158 -----VWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASVV 196 (199)
T ss_dssp -----HHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHHH
T ss_pred -----HHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHHh
Confidence 2333333 45777777 469999999999999887643
No 45
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.65 E-value=5.3e-16 Score=144.70 Aligned_cols=185 Identities=12% Similarity=0.133 Sum_probs=123.6
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
.|.+||||+|.|+||. .||+|+|++|+ |||+|+++++.++|+++|+|++++..+.+.+++. . ++
T Consensus 5 ~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~-----~---~~-- 68 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMA-----L---DG-- 68 (197)
T ss_dssp EEEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSC-----C---TT--
T ss_pred ceEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhc-----c---CC--
Confidence 3789999999999993 79999999999 6999999999999999999999988766655542 1 22
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee--ccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY--RMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~--~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
++++... .+..|++++++.+...+. ...+.+++++||+.+ ...+..+++. +.++++++...
T Consensus 69 -~~~~~~~--------~~~~g~~~~i~~al~~~~----~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~~~~-- 131 (197)
T 2wee_A 69 -TDVVVVE--------DVERGCAASLRVALARVH----PRATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMVCRY-- 131 (197)
T ss_dssp -SEEEECC------------CCHHHHHHHHTTSC----TTEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEEEEE--
T ss_pred -CEEEECC--------CcccCHHHHHHHHHHHhc----ccCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEEEec--
Confidence 3344321 123699999999986662 123689999999943 4567788776 34444332110
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCc
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 301 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d 301 (497)
| | ++.. + ++|+++.|..+. .. .. +
T Consensus 132 -------------~--g-------~~~~-----------------------P-------~~~~~~~l~~l~-~~-~~--~ 155 (197)
T 2wee_A 132 -------------A--D-------GVGH-----------------------P-------FWFSRTVFGELA-RL-HG--D 155 (197)
T ss_dssp -------------T--T-------EEEE-----------------------E-------EEEEGGGHHHHH-TC-CS--T
T ss_pred -------------C--C-------CcCC-----------------------C-------EEECHHHHHHHH-hC-CC--C
Confidence 1 1 0000 0 377888877553 21 11 1
Q ss_pred hhhhhHHhhhcc--CceEEEEe-ccEEEecCCHHHHHHHHHH
Q 010922 302 FGSEIIPAAIME--HDVQAYIF-RDYWEDIGTIKSFYEANMA 340 (497)
Q Consensus 302 ~~~~ii~~li~~--~~v~~~~~-~g~w~dIgt~~~y~~An~~ 340 (497)
. -+..++++ .++..+.. .++|.||+||+||.+++..
T Consensus 156 ~---~~~~~l~~~~~~v~~v~~~~~~~~dIdtpeDl~~~~~~ 194 (197)
T 2wee_A 156 K---GVWKLVHSGRHPVRELAVDGCVPLDVDTWDDYRRLLES 194 (197)
T ss_dssp T---HHHHHHHCTTSCEEEEECSSCCCCCCSSHHHHHHHHTC
T ss_pred h---hHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHH
Confidence 1 12344444 35777776 4689999999999888653
No 46
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.63 E-value=9.2e-15 Score=140.35 Aligned_cols=217 Identities=12% Similarity=0.132 Sum_probs=136.4
Q ss_pred CCCceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcC-CcEEEEEcccChhHHHHHHHhcccCCCcc
Q 010922 61 KPGVAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNSASLNRHIARTYFGNGTN 139 (497)
Q Consensus 61 ~~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~G-I~~I~Iv~~~~~~~l~~~l~~~y~~~g~~ 139 (497)
+-.+|.|||||+|.|+||. ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++....+ + +.+..
T Consensus 10 ~~~~~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~---~-~~~~~---- 77 (234)
T 1vpa_A 10 HHHMNVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEV---V-EKRVF---- 77 (234)
T ss_dssp -CCCEEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHH---H-HTTCC----
T ss_pred ccccCeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHH---H-HHHhc----
Confidence 4568999999999999997 3579999999999 59999999999998 999999999876432 2 12211
Q ss_pred cCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe-ee-ccCHHHHHHHHHHcCCCeEEE
Q 010922 140 FGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LY-RMDYMDFIQSHVDRDADITIS 217 (497)
Q Consensus 140 ~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~-l~-~~dl~~ll~~h~~~~a~~tl~ 217 (497)
++. .+... .. | .+..++++.+...+.+ ...+.+++++||. +. ...+..+++.+.+.+ ..++
T Consensus 78 ~~~-~~~~~--~g-----g----~~~~~sv~~al~~~~~---~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~--~~i~ 140 (234)
T 1vpa_A 78 HEK-VLGIV--EG-----G----DTRSQSVRSALEFLEK---FSPSYVLVHDSARPFLRKKHVSEVLRRARETG--AATL 140 (234)
T ss_dssp CTT-EEEEE--EC-----C----SSHHHHHHHHHHHHGG---GCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS--EEEE
T ss_pred cCC-ceEEe--CC-----C----CcHHHHHHHHHHHhhh---cCCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEE
Confidence 211 12211 10 0 2377889888877741 0235688888997 33 457888888887654 3343
Q ss_pred EeeeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCC
Q 010922 218 CAAVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYP 297 (497)
Q Consensus 218 ~~~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~ 297 (497)
+.+..+ ++...+++| | .+.++.. .+..-.-++|+.+.|..+++...
T Consensus 141 ~~~~~~------~~~~~~~~g-v-~~~~r~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~- 186 (234)
T 1vpa_A 141 ALKNSD------ALVRVENDR-I-EYIPRKG-------------------------VYRILTPQAFSYEILKKAHENGG- 186 (234)
T ss_dssp EEECCS------EEEEEETTE-E-EEECCTT-------------------------EEEEEEEEEEEHHHHHHHHTTCC-
T ss_pred EEecCC------cEEEECCCC-c-ccCChhH-------------------------eeeecCCccccHHHHHHHHHhcC-
Confidence 444332 122335566 6 5544311 00111335888888876654311
Q ss_pred CCCchhhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010922 298 TSNDFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTK 343 (497)
Q Consensus 298 ~~~d~~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~ 343 (497)
...+ ...++... ..++..+..++.|.||+||+||..|+..+.+
T Consensus 187 ~~~~-~~~~~~~~--g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 229 (234)
T 1vpa_A 187 EWAD-DTEPVQKL--GVKIALVEGDPLCFKVTFKEDLELARIIARE 229 (234)
T ss_dssp CCSS-SHHHHHTT--TCCCEEEECCGGGCCCCSTTHHHHHHHHHHH
T ss_pred CCCc-HHHHHHHc--CCcEEEEECCchhcCCCCHHHHHHHHHHHhc
Confidence 0011 11122211 3467777667789999999999999875543
No 47
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.60 E-value=1.1e-14 Score=140.64 Aligned_cols=204 Identities=7% Similarity=-0.018 Sum_probs=125.4
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
+.|||||+|.|+||.+ . ||+|+|++|+ |||+|+++. ..++++|+|++++. + +. +.. .+
T Consensus 26 ~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~~-------~-~~-~~~---~~--- 83 (236)
T 2px7_A 26 VSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPPG-------A-EP-PKG---LG--- 83 (236)
T ss_dssp CEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECTT-------C-CC-CTT---CS---
T ss_pred eEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCHH-------H-HH-hhc---CC---
Confidence 5699999999999984 3 9999999999 599999999 77899999999861 1 11 111 11
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe-eec-cCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYR-MDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
++++... .|...+++.+...++ .+.+++++||. +.. ..+..+++.+.+.+ ..+.+.+..
T Consensus 84 v~~~~~~-----------~~~~~~i~~al~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~ 144 (236)
T 2px7_A 84 AVFLEGG-----------ATRQASVARLLEAAS------LPLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLPVP 144 (236)
T ss_dssp CEEEECC-----------SSHHHHHHHHHHHCC------SSEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEECC
T ss_pred cEEEeCC-----------CchHHHHHHHHHHcC------CCeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEecC
Confidence 3444211 367888988876663 36799999997 433 46888888877654 344444433
Q ss_pred CCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCch
Q 010922 223 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSNDF 302 (497)
Q Consensus 223 ~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d~ 302 (497)
+ ... ..+ +|++..+.++... .... ..++|+++.|.++++........+
T Consensus 145 ~--~~~----~~~-~G~v~~~~~~~~~------------------------~~~~-~~~~f~~~~l~~~~~~~~~~g~~~ 192 (236)
T 2px7_A 145 D--TLM----APE-GEAYGRVVPREAF------------------------RLVQ-TPQGFFTALLREAHAYARRKGLEA 192 (236)
T ss_dssp S--EEE----EEC-SSSCEEEECGGGC------------------------EEEC-SCEEEEHHHHHHHHHHHHHHTCCC
T ss_pred C--cEE----Eec-CCeEEecCChHhh------------------------cccc-CCeEEcHHHHHHHHHHHHhcCCCc
Confidence 3 111 124 6787766543210 1112 246788887766554321111111
Q ss_pred --hhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHHHHhhc
Q 010922 303 --GSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEANMALTK 343 (497)
Q Consensus 303 --~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An~~l~~ 343 (497)
...++... ..++..+..+++|.||+||+||..|+..+.+
T Consensus 193 ~d~~~ll~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 233 (236)
T 2px7_A 193 SDDAQLVQAL--GYPVALVEGEATAFKITHPQDLVLAEALARV 233 (236)
T ss_dssp SSHHHHHHHT--TCCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred hhHHHHHHHc--CCcEEEEECCccccCCCCHHHHHHHHHHHHh
Confidence 11222221 3568888888899999999999999876653
No 48
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.55 E-value=7.2e-14 Score=148.85 Aligned_cols=214 Identities=15% Similarity=0.172 Sum_probs=142.2
Q ss_pred ccCCCceEEEEecCCCCCcccCCCCCCCCccccc---cCcccchhHhHHHHHh--------cC----CcEEEEEcccChh
Q 010922 59 KVKPGVAYAVMTSKHPNEVMTLAPPRAATPAVPV---AGCYRLIDIPMSNCIN--------SG----INKIFVLTQFNSA 123 (497)
Q Consensus 59 ~~~~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI---~g~p~LId~~L~~l~~--------~G----I~~I~Iv~~~~~~ 123 (497)
.+....|.+||||+|.||||. ...||+|+|| .|+ |+++++++++.. .| +..+++...+.++
T Consensus 97 ~i~~~kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e 172 (505)
T 1jv1_A 97 QISQNKVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTME 172 (505)
T ss_dssp HHHTTCEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHH
T ss_pred hhccCceEEEEEcCCccccCC---CCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHH
Confidence 344567899999999999984 5799999999 799 599999999876 37 7777777777788
Q ss_pred HHHHHHHhc-ccCCCcccCCCeEEEee-----CccCCC-------CCCCccccChHHHHHHHHH--HhhhhccCCCCcEE
Q 010922 124 SLNRHIART-YFGNGTNFGDGFVEVLA-----ATQTPG-------ESGKNWFQGTADAVRQFTW--VFEDAKNRNIENVA 188 (497)
Q Consensus 124 ~l~~~l~~~-y~~~g~~~~~~~VeIl~-----~~~~~~-------e~~~~~~~GTa~aL~~~~~--~i~~~~~~~~e~~L 188 (497)
.+.+|+.+. ||+... ..|.++. .-...+ ..-...+.|||++++.+.. .+++......+.|+
T Consensus 173 ~t~~~f~~~~~fGl~~----~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~ 248 (505)
T 1jv1_A 173 STKEFFTKHKYFGLKK----ENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIH 248 (505)
T ss_dssp HHHHHHHHTGGGGSCG----GGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEE
T ss_pred HHHHHHHhhhhcCCCc----CceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEE
Confidence 898888642 343210 0122111 000000 0000124799999987643 22222223468999
Q ss_pred EEcCCee-eccCHHHHHHHHHHcCCCeEEEEee-eCCCCCCcceEEEECCCCC--EEEEeecCCccccccccccccccCC
Q 010922 189 ILCGDHL-YRMDYMDFIQSHVDRDADITISCAA-VGESRASDYGLVKIDNMGR--IAQFAEKPSGANLKAMQVDTSLLGF 264 (497)
Q Consensus 189 Vl~gD~l-~~~dl~~ll~~h~~~~a~~tl~~~~-~~~~~~~~~g~v~~d~~g~--V~~~~EKp~~~~~~~~~~~~~~~~~ 264 (497)
|+++|++ ...+...++..|.++++++++.+.+ ... ...+|++..+ +|+ |+++.|+|...... .+
T Consensus 249 V~n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~--~e~~Gvl~~~-dg~~~vvEy~E~p~~~~~~---~~------ 316 (505)
T 1jv1_A 249 VYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNP--TEPVGVVCRV-DGVYQVVEYSEISLATAQK---RS------ 316 (505)
T ss_dssp EEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCST--TCSCCEEEEE-TTEEEEECGGGSCHHHHHC---BC------
T ss_pred EEECCccccccchHHHHHHHHHcCCCEEEEEEEccCC--ccCcceEEEE-CCeEEEEEEeeCCHHHhhh---cc------
Confidence 9999996 7777779999999999999998886 443 4579988764 344 45566666532100 00
Q ss_pred CccccccCCccceeeEEEEcHHHHHHHHhh
Q 010922 265 SPQEARKCPYVASMGVYVFKKDVLFKLLRW 294 (497)
Q Consensus 265 ~~~~~~~~~~l~~~Giyif~~~vL~~ll~~ 294 (497)
+.. ....+..++|+|+|+.++|.++.+.
T Consensus 317 -~~g-~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 317 -SDG-RLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp -TTS-SBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred -ccc-ccccceeeEEEEEecHHHHHHHHHh
Confidence 000 0124678999999999999877653
No 49
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.54 E-value=2.7e-13 Score=130.79 Aligned_cols=217 Identities=12% Similarity=0.096 Sum_probs=145.0
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcC-CcEEEEEcccCh-hHHHHHHHhcccCCCcccC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSG-INKIFVLTQFNS-ASLNRHIARTYFGNGTNFG 141 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~G-I~~I~Iv~~~~~-~~l~~~l~~~y~~~g~~~~ 141 (497)
++.|||||+|.|+||. ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++.. +.+.+++.. .
T Consensus 7 ~~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~---------~ 73 (231)
T 3q80_A 7 EVVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH---------R 73 (231)
T ss_dssp CEEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG---------G
T ss_pred ceEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC---------C
Confidence 5789999999999996 3689999999999 59999999999874 999999999775 344443321 1
Q ss_pred CCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe--eeccCHHHHHHHHHHcCCCeEEEEe
Q 010922 142 DGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH--LYRMDYMDFIQSHVDRDADITISCA 219 (497)
Q Consensus 142 ~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~ 219 (497)
+.++... .+-.++++.++..+.+ ....+.+|++.||. +....+..+++.+.+ +.+..+...
T Consensus 74 ---v~~v~gg-----------~~r~~sv~~gl~~~~~--~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~ 136 (231)
T 3q80_A 74 ---AMIVAGG-----------SNRTDTVNLALTVLSG--TAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVL 136 (231)
T ss_dssp ---CEEEECC-----------SSHHHHHHHHHGGGC-----CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred ---eEEEcCC-----------CchHHHHHHHHHHhhh--cCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEE
Confidence 3344321 1346888888876652 01136799999997 334567888887765 356677777
Q ss_pred eeCCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCC-
Q 010922 220 AVGESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPT- 298 (497)
Q Consensus 220 ~~~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~- 298 (497)
++.++ +...|++|.|.+..+... . +.+.+ -+.|+.+.|.+.++....+
T Consensus 137 p~~dt------~~~~~~~g~v~~~~~r~~---l---------------------~~~qT-Pq~F~~~~L~~a~~~~~~~n 185 (231)
T 3q80_A 137 PLSDT------IKAVDANGVVLGTPERAG---L---------------------RAVQT-PQGFTTDLLLRSYQRGSLDL 185 (231)
T ss_dssp CCSSC------EEEECTTSBEEECCCGGG---E---------------------EEECS-CEEEEHHHHHHHHHHHTC--
T ss_pred eccCC------EEEEcCCCcEEEecchhh---e---------------------EEEcC-CcEEEHHHHHHHHHHHHhhc
Confidence 76652 122467788776654311 0 22333 4899999988877664431
Q ss_pred CCchhhhhHHhhhc-cCceEEEEeccEEEecCCHHHHHHHHHHh
Q 010922 299 SNDFGSEIIPAAIM-EHDVQAYIFRDYWEDIGTIKSFYEANMAL 341 (497)
Q Consensus 299 ~~d~~~~ii~~li~-~~~v~~~~~~g~w~dIgt~~~y~~An~~l 341 (497)
...+.+|-...+.. ..++....-+..++.|+||+|+..|+..+
T Consensus 186 ~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 186 PAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp ---CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 11223443333322 35677666666789999999999988654
No 50
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.50 E-value=2.4e-14 Score=134.93 Aligned_cols=177 Identities=8% Similarity=-0.003 Sum_probs=110.1
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
+.|||||+|.|+||. .||+|+|++|+ |||+|+++.+..+ +++|+|++++... +++ . +
T Consensus 15 ~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~-----~-----~--- 71 (201)
T 2e8b_A 15 NTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FSF-----L-----N--- 71 (201)
T ss_dssp CEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GGG-----G-----T---
T ss_pred ceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hhc-----C-----C---
Confidence 589999999999996 79999999999 5999999999988 9999999987653 111 1 2
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeee-cc-CHHH-HHHHHHHcCCCeEEEEeee
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLY-RM-DYMD-FIQSHVDRDADITISCAAV 221 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~-~~-dl~~-ll~~h~~~~a~~tl~~~~~ 221 (497)
++++.... +..|++++++.+...+. .+.+++++||+.+ .. .+.. ++ +.++++.
T Consensus 72 ~~~v~~~~--------~~~g~~~~i~~al~~~~------~~~~lv~~~D~P~i~~~~i~~~l~------~~~~~v~---- 127 (201)
T 2e8b_A 72 APVVLDEF--------EESASIIGLYTALKHAK------EENVFVLSGDLPLMKKETVLYVLE------NFKEPVS---- 127 (201)
T ss_dssp CCEEECCC--------SSCCHHHHHHHHHHHCS------SSEEEEEETTCTTCCHHHHHHHHH------TCCSSEE----
T ss_pred ceEEecCC--------CCCCcHHHHHHHHHHcC------CCCEEEEeCCcCcCCHHHHHHHHh------cCCEEEE----
Confidence 23333221 22699999999987764 3789999999954 33 3444 44 1222110
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCc
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSND 301 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d 301 (497)
.. +|+ .....|+| |+++++..+.+....+. .
T Consensus 128 -----------~~--~g~----------------------------------~~p~~giy-~~~~~~~~l~~~~~~g~-~ 158 (201)
T 2e8b_A 128 -----------VA--KTE----------------------------------KLHTLVGV-YSKKLLEKIEERIKKGD-Y 158 (201)
T ss_dssp -----------EE--ESS----------------------------------SEEEEEEE-EEGGGHHHHHHHHHTTC-C
T ss_pred -----------ec--CCc----------------------------------eeeEEEEE-eChhHHHHHHHHHHcCC-c
Confidence 00 010 13467999 99997764332111111 2
Q ss_pred hhhhhHHhhhccCceEEEEec--cEEE--ecCCHHHHHHHHHHh
Q 010922 302 FGSEIIPAAIMEHDVQAYIFR--DYWE--DIGTIKSFYEANMAL 341 (497)
Q Consensus 302 ~~~~ii~~li~~~~v~~~~~~--g~w~--dIgt~~~y~~An~~l 341 (497)
...+++. +.++..+.+. +.|. |||||++|.+++..+
T Consensus 159 ~~~~~l~----~~~~~~~~~~~~~~~~~~dintpedl~~~~~~~ 198 (201)
T 2e8b_A 159 RIWALLK----DVGYNEVEIPEELRYTLLNMNTKEDLKRILAIE 198 (201)
T ss_dssp CHHHHHH----HHCCEEEECCGGGGGGGCCSCCC----------
T ss_pred hHHHHHH----HCCeEEeccccccchhhcCCCCHHHHHHHHHHh
Confidence 2334443 3356666663 5799 999999998887543
No 51
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.50 E-value=2.5e-15 Score=145.68 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=21.0
Q ss_pred ccCceEEEEeccE----EEecCCHHHHHHHHHHhhcC
Q 010922 312 MEHDVQAYIFRDY----WEDIGTIKSFYEANMALTKE 344 (497)
Q Consensus 312 ~~~~v~~~~~~g~----w~dIgt~~~y~~An~~l~~~ 344 (497)
+..++++|...+| |.|+++ |+++|..+++.
T Consensus 37 ~~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~ 70 (240)
T 3r8y_A 37 ETVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVD 70 (240)
T ss_dssp TTSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEE
T ss_pred CcceEEEcCCCeEEEccHHHHHH---HHHhccceech
Confidence 3456666665555 999887 88898877643
No 52
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.48 E-value=7.9e-14 Score=130.96 Aligned_cols=181 Identities=9% Similarity=0.098 Sum_probs=110.8
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
|.+||||+|.|+||. .||+|+|++|+ |||+|+++.+..+ +|+|++++..+.+. .++. .+
T Consensus 3 ~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~-----~~~~----~~--- 61 (197)
T 3d5n_A 3 IGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEML-----PLLM----DQ--- 61 (197)
T ss_dssp EEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHG-----GGCT----TS---
T ss_pred eEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHH-----HHhc----CC---
Confidence 689999999999996 39999999999 5999999999877 88899988754332 2222 12
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe-eec-cCHHHHHHHHHHcCCCeEEEEeeeC
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYR-MDYMDFIQSHVDRDADITISCAAVG 222 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~ 222 (497)
+ ++... .|..|++++|+.+...+. ..+.+++++||. +.. ..+..+++.+ +.++++++...
T Consensus 62 ~-~v~~~--------~~~~G~~~si~~al~~~~-----~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~--- 123 (197)
T 3d5n_A 62 I-VIYNP--------FWNEGISTSLKLGLRFFK-----DYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH--- 123 (197)
T ss_dssp C-EEECT--------TGGGCHHHHHHHHHHHTT-----TSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE---
T ss_pred E-EEECC--------CCCCCHHHHHHHHHHhhc-----cCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe---
Confidence 3 33221 133699999999988775 236899999999 433 4567777766 44444333221
Q ss_pred CCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCch
Q 010922 223 ESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSNDF 302 (497)
Q Consensus 223 ~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d~ 302 (497)
+ | ++. .+ .+|+++.+..+. .. ....+
T Consensus 124 ------------~--g-------~~~-----------------------~P-------~~~~~~~l~~l~-~l-~g~~~- 149 (197)
T 3d5n_A 124 ------------K--G-------ERG-----------------------NP-------VLISKSLFNEIE-KL-RGDVG- 149 (197)
T ss_dssp ------------T--T-------EEC-----------------------SC-------EEEEHHHHHHHH-HC-CTTCC-
T ss_pred ------------C--C-------ccc-----------------------CC-------EEECHHHHHHHH-cc-CCCcc-
Confidence 0 1 000 01 278888887654 22 22222
Q ss_pred hhhhHHhhhcc--CceEEEEec--cEEEecCCHHHHHHHHHHhh
Q 010922 303 GSEIIPAAIME--HDVQAYIFR--DYWEDIGTIKSFYEANMALT 342 (497)
Q Consensus 303 ~~~ii~~li~~--~~v~~~~~~--g~w~dIgt~~~y~~An~~l~ 342 (497)
+..++++ .++..+..+ +.|.||+||+||..++..+.
T Consensus 150 ----~~~~l~~~~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~~ 189 (197)
T 3d5n_A 150 ----ARVILNKIKIEELCFIECSEGVLIDIDKKEDLMRLRDFHP 189 (197)
T ss_dssp ----THHHHTTSCGGGEEEEECCGGGTCCTTTC-----------
T ss_pred ----HHHHHHhCccCeEEEEcCCCCcccCCCCHHHHHHHHHhhc
Confidence 1223333 346666654 57999999999988876544
No 53
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.46 E-value=5.2e-13 Score=125.87 Aligned_cols=109 Identities=9% Similarity=-0.002 Sum_probs=81.0
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
.|.+||||+|.|+||. ..||+|+|++|+ |||+|+++.+.. ++++|+|++++..+.+ .+ ++
T Consensus 6 ~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~----~~--------~~-- 65 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIY----QA--------SG-- 65 (201)
T ss_dssp SEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHH----HT--------TS--
T ss_pred cceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHH----hh--------cC--
Confidence 3789999999999997 379999999999 699999999985 6999999998875422 11 12
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCe-eecc-CHHHHHHH
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDH-LYRM-DYMDFIQS 206 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~-l~~~-dl~~ll~~ 206 (497)
++++.... + ...|++++|+.+...+. .+.+++++||+ +... .+..+++.
T Consensus 66 -~~~v~~~~-~------~~~G~~~si~~~l~~~~------~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 66 -LKVIEDSL-A------DYPGPLAGMLSVMQQEA------GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp -CCEECCCT-T------CCCSHHHHHHHHHHHCC------SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred -CeEEecCC-C------CCCCHHHHHHHHHHhCC------CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 23332211 1 01599999999987764 37899999999 4444 46676664
No 54
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.42 E-value=4e-13 Score=130.85 Aligned_cols=143 Identities=17% Similarity=0.259 Sum_probs=95.8
Q ss_pred HHHHHHHhhcCCCC--ccccCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcc
Q 010922 334 FYEANMALTKESPA--FHFYDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLRECTVEHSIVGERSRLDYGVELKD 409 (497)
Q Consensus 334 y~~An~~l~~~~~~--~~~~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~ 409 (497)
..++|+.|+.+.|. +.+++....+.+++.+.|++.|. ++.|. ++.|+++|.|.+..-.+++||++|.|+++|.|..
T Consensus 37 ~~~~~~~~~~~~p~~~~~~~~~~~~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~ 116 (247)
T 1qre_A 37 ITVDEFSNIRENPVTPWNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHA 116 (247)
T ss_dssp -CCCCCCSEECCCCBTTBSSCCCCEECTTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEE
T ss_pred chhhhhhhccCCCCccccccCCCcEECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEe
Confidence 44567777666554 44555666677777777777663 34442 3555555555421112459999999999999974
Q ss_pred e-----------------------EEeCCccccchhHHHHhhcCCCcceEeCCCcEeec-eEEcCCCEECCCcEEcCCCC
Q 010922 410 T-----------------------VMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRN-CIIDKNVKIGKDVVIVNKDD 465 (497)
Q Consensus 410 s-----------------------~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~-~iI~~~~~Ig~~~~i~~~~~ 465 (497)
. +++|++ +.||+++.|.+ |+||++|.||++++|.+ ..
T Consensus 117 ~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~------------------v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~-v~ 177 (247)
T 1qre_A 117 LETINEEGEPIEDNIVEVDGKEYAVYIGNN------------------VSLAHQSQVHGPAAVGDDTFIGMQAFVFK-SK 177 (247)
T ss_dssp CCSBCTTSCBCGGGCEEETTEEESEEECTT------------------CEECTTCEEEEEEEECTTCEECTTCEEEE-EE
T ss_pred cccccccCcccccceeeccCccCceEECCC------------------CEECCCCEEcCCcEECCCCEECCCCEEec-eE
Confidence 3 444443 89999999987 99999999999999986 55
Q ss_pred CCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 466 VQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 466 v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
+++...+++++.| .+. .|+++++|++|++|
T Consensus 178 Ig~~~~IgagsvV-~~~-~I~~~~~v~~g~vv 207 (247)
T 1qre_A 178 VGNNCVLEPRSAA-IGV-TIPDGRYIPAGMVV 207 (247)
T ss_dssp ECTTCEECTTCEE-ESC-EECTTBEECTTCEE
T ss_pred ECCCCEECCCCEE-CCe-EeCCCCEECCCCEE
Confidence 6665555555555 442 25778888777754
No 55
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.41 E-value=2.2e-13 Score=144.57 Aligned_cols=247 Identities=11% Similarity=0.082 Sum_probs=146.5
Q ss_pred cChHHHHHHHHHHhhhhccCCCCcEEEEc----CCeeeccCHHHHHHHHHHc--C---------CCeEEEEeeeCCCCCC
Q 010922 163 QGTADAVRQFTWVFEDAKNRNIENVAILC----GDHLYRMDYMDFIQSHVDR--D---------ADITISCAAVGESRAS 227 (497)
Q Consensus 163 ~GTa~aL~~~~~~i~~~~~~~~e~~LVl~----gD~l~~~dl~~ll~~h~~~--~---------a~~tl~~~~~~~~~~~ 227 (497)
++|+.+++.+.+.+ .+++|++ +|.....++.+++..|.++ + ...++.+..+.+.-.+
T Consensus 124 L~~a~~i~~~d~~~--------~~t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti~L~~l~d~li~ 195 (496)
T 3c8v_A 124 LHDDEVITIKDSFL--------NKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVDLSTIHNSVVR 195 (496)
T ss_dssp CSSCCEEEEESCEE--------ESCEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEEESCEEESCEEC
T ss_pred hhHhhhHHhhhhcC--------CceEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEecccceeeHHHHHHHHHH
Confidence 67777755432111 1248888 5888777777777777753 2 2445555555553224
Q ss_pred cceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCccceeeEEEEcHHHHHHHHhhhCCCCCchhhhhH
Q 010922 228 DYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRWRYPTSNDFGSEII 307 (497)
Q Consensus 228 ~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~~~~~~~d~~~~ii 307 (497)
.|+.+. .|++..+.++|..... .+......+|.|+++.|..++.+.. +.+
T Consensus 196 ~~~~~~---~g~i~~~~~~pg~~~i-------------------~~~~~lnf~Y~f~~~~L~~~l~~~~-~~n------- 245 (496)
T 3c8v_A 196 YFSYVQ---TGELVGKCVEPGQIWI-------------------KSGDELEFHYSFDKAILDKYISQEA-GSC------- 245 (496)
T ss_dssp TTCEEE---SSEEESCEECTTEEEE-------------------ECTTSEEEEEECCHHHHTTTCBCCT-TSC-------
T ss_pred HHhhhc---CCceEEeeecCCceec-------------------ccccccceEEEcCHHHHHHHHhhcc-Ccc-------
Confidence 576663 4677777777763211 1123345699999988865432211 100
Q ss_pred HhhhccCceEEEEeccEEEec--CCHHHHHHHHHHhhcCCCCccccCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCC
Q 010922 308 PAAIMEHDVQAYIFRDYWEDI--GTIKSFYEANMALTKESPAFHFYDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGC 383 (497)
Q Consensus 308 ~~li~~~~v~~~~~~g~w~dI--gt~~~y~~An~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~ 383 (497)
..+.|.|+ ..++++.+....... ++ .+.+.+++.|. .+.+. ++.||++|
T Consensus 246 -------------~~g~~~Dll~~~~~d~~~i~~~~~~--------~~------~~~I~~~a~I~p~a~i~g~v~IG~~~ 298 (496)
T 3c8v_A 246 -------------PTGVLMEFVEVRQEDFEEVFASGHM--------AS------GAGSASGASVSGYAVIKGDTVIGENV 298 (496)
T ss_dssp -------------CBSHHHHHHHTTTHHHHHHHHC----------------------CCTTCEECTTSEEESSCEECTTC
T ss_pred -------------ccceeeehhccchHHHHHHhhcccc--------cc------CcccCCCcEECCCcEEeCCeEECCCC
Confidence 12223332 234555443211110 01 12233444443 23332 67788888
Q ss_pred EEc-ceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcC
Q 010922 384 FLR-ECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVN 462 (497)
Q Consensus 384 ~i~-~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~ 462 (497)
+|+ +|.|.+++||++|.|+++|+|.++++..+ +.||+++.|.+|+||++|.||++++|.+
T Consensus 299 ~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~-------------------~~Ig~~a~I~gv~IGd~v~IG~~a~I~~ 359 (496)
T 3c8v_A 299 LVSQRAYLDNAWMGKGSNAQENCYIINSRLERN-------------------CVTAHGGKIINAHLGDMIFTGFNSFLQG 359 (496)
T ss_dssp EECTTCEEEEEEECTTCEECTTCEEEEEEEEES-------------------CEECTTCEEESEEEEETCEECTTCEEEC
T ss_pred EECCCcEEeceEecCCCEECCCceEeceEeCCC-------------------CEECCCcEEcCceECCCcEECCCCEEeC
Confidence 887 57778899999999999999999988877 8999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCeEEccccEEEc--cCcEECCCcc
Q 010922 463 KDDVQEADRPELGFYIRSGITIIM--EKATIEDGMV 496 (497)
Q Consensus 463 ~~~v~~~~~~~~~~~i~~g~~vi~--~~~~i~~g~~ 496 (497)
+. .....+++++.|+.|.+| . +++.|++|++
T Consensus 360 ~~--~~~v~IG~~a~IGagsvV-~~~~~~~I~~~s~ 392 (496)
T 3c8v_A 360 SE--SSPLKIGDGCVVMPHTII-DLEEPLEIPAGHL 392 (496)
T ss_dssp CS--SSCEEECTTCEECTTCEE-ECSSCEEECSSEE
T ss_pred CC--CcceEECCCCEECCCCEE-ecCCCcEeCCCCE
Confidence 61 112344455555555332 3 4455555543
No 56
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.40 E-value=2e-12 Score=132.55 Aligned_cols=46 Identities=4% Similarity=-0.110 Sum_probs=27.0
Q ss_pred EEEecCCHHHHHHHHHHhhcCCCCccccCCCCCCCCCCccCCCeEE
Q 010922 324 YWEDIGTIKSFYEANMALTKESPAFHFYDPKTPFYTSPRFLPPTKI 369 (497)
Q Consensus 324 ~w~dIgt~~~y~~An~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i 369 (497)
.|.-+.+|...+.....++...+....++|.+.+.+++.+.+++.|
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~~~~i~p~a~I~~~a~ig~~~~I 123 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKISSTGIESTARIHPSAVISETAYI 123 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCCCCEECTTCEECTTCEECTTCEE
T ss_pred cEEEECCHHHHHHHHHHHhccccccCeeCCCCEECCCCEECCCCEE
Confidence 4566778887666656555544333556666666655555555554
No 57
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.37 E-value=4.1e-12 Score=129.53 Aligned_cols=82 Identities=17% Similarity=0.216 Sum_probs=44.5
Q ss_pred EecCCHHHHHHHHHHhhcCCC-CccccCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEE-eeeEEcCCcE
Q 010922 326 EDIGTIKSFYEANMALTKESP-AFHFYDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTV-EHSIVGERSR 400 (497)
Q Consensus 326 ~dIgt~~~y~~An~~l~~~~~-~~~~~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v-~~svIg~~~~ 400 (497)
.-+.+|...+.....++...+ ....++|.+.+.+++.+.++++|. ++.|. ++.||++|+|+ ++.| .++.||++|.
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~ 153 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSR 153 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcE
Confidence 446778776666665555432 234566777776666666666663 34443 35555555554 2333 3444444444
Q ss_pred ECCCCEE
Q 010922 401 LDYGVEL 407 (497)
Q Consensus 401 i~~~~~i 407 (497)
|++++.|
T Consensus 154 I~~~~~I 160 (341)
T 3eh0_A 154 LWANVTI 160 (341)
T ss_dssp ECSSCEE
T ss_pred ECCCcEE
Confidence 4444444
No 58
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.35 E-value=4.4e-12 Score=125.12 Aligned_cols=146 Identities=14% Similarity=0.113 Sum_probs=81.4
Q ss_pred cCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEc-------------ceEEe
Q 010922 351 YDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELK-------------DTVML 413 (497)
Q Consensus 351 ~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~-------------~s~i~ 413 (497)
++|.+.+.+.+.+.+++.|. .|.|. ++.||++|+|+ ++.|. +++||++|.|+++|.|. ...+.
T Consensus 4 I~p~a~I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG 83 (270)
T 1j2z_A 4 IAKTAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIG 83 (270)
T ss_dssp BCTTCEECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEEC
T ss_pred cCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEEC
Confidence 44555555556666666663 36664 67777777777 46665 78888888888888883 23333
Q ss_pred CCccccchhHHHHhhcCCCcceEeCCCcEee-ceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEE-----Ecc
Q 010922 414 GADYYQTESEIASLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITI-----IME 487 (497)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~v-----i~~ 487 (497)
++..++..+.|..--..+.-.+.||+++.|. ++.|++++.||+++.|.+...+.....+++++.|+.+.+| ||+
T Consensus 84 ~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~IG~ 163 (270)
T 1j2z_A 84 EDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAK 163 (270)
T ss_dssp SSCEECTTCEECCCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECT
T ss_pred CCCEECCCeEEcCCeecCCccEEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECCCcEeCC
Confidence 3333333222210000000126667766663 5555555666666665555554445555555555555432 567
Q ss_pred CcEECCCcc
Q 010922 488 KATIEDGMV 496 (497)
Q Consensus 488 ~~~i~~g~~ 496 (497)
++.|++|++
T Consensus 164 ~a~Ig~~s~ 172 (270)
T 1j2z_A 164 GCMIAGKSA 172 (270)
T ss_dssp TCEECTTCE
T ss_pred ceEEecCcE
Confidence 777777665
No 59
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.34 E-value=9.5e-12 Score=128.23 Aligned_cols=62 Identities=15% Similarity=0.279 Sum_probs=33.2
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEE-----EccCcEECCCcc
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITI-----IMEKATIEDGMV 496 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~v-----i~~~~~i~~g~~ 496 (497)
+.||++++|. ++.|+++++||+++.|.+..++...+++++++.|+.+..| |+++++|+++++
T Consensus 245 t~IG~~~~I~~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~Ig~~~vI~a~s~ 312 (372)
T 3pmo_A 245 TLIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTM 312 (372)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECSSEEECTTCE
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEECCCCEEeeCCE
Confidence 3444444443 3455555556666666555555555666666666555443 355555555443
No 60
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.34 E-value=3.7e-12 Score=126.42 Aligned_cols=144 Identities=10% Similarity=0.138 Sum_probs=73.1
Q ss_pred ccCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEc-------------ceEE
Q 010922 350 FYDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELK-------------DTVM 412 (497)
Q Consensus 350 ~~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~-------------~s~i 412 (497)
.++|.+.+.+.+.+.++++|. .|.|. ++.||++|.|+ .+.|. +++||++|+|+++|.|. +..+
T Consensus 24 ~I~p~a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~I 103 (283)
T 4eqy_A 24 RIHPTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVI 103 (283)
T ss_dssp CBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEE
T ss_pred ccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEE
Confidence 455555555555555555553 35553 46677777776 35554 57777777777777772 2333
Q ss_pred eCCccccchhHHH---------HhhcCCCcceEeCCCcEe-eceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEcccc
Q 010922 413 LGADYYQTESEIA---------SLLAEGKVPIGVGRNTKI-RNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGI 482 (497)
Q Consensus 413 ~~~~~~~~~~~~~---------~~~~~~~~~~~Ig~~~~i-~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~ 482 (497)
.++..++..+.|. ..++++ +.|+.++.| .+|+||+++.|+.++.+.....+++...++.++.|..++
T Consensus 104 G~~~~Ig~~~~I~~g~~~~~~~~~IG~~---~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v 180 (283)
T 4eqy_A 104 GDRNTIREFTTIHTGTVQDAGVTTLGDD---NWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYV 180 (283)
T ss_dssp CSSCEECTTEEEECCCTTTTSEEEECSS---CEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CCCcccCcceeEccceecCCCceEECCC---cEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCe
Confidence 3333222222221 111122 333333333 344555555555555554444444444444555554443
Q ss_pred EEEccCcEECCCccC
Q 010922 483 TIIMEKATIEDGMVI 497 (497)
Q Consensus 483 ~vi~~~~~i~~g~~i 497 (497)
+ |+++++|++|++|
T Consensus 181 ~-Ig~~~vvg~~s~V 194 (283)
T 4eqy_A 181 R-IGAHSMLGGASAL 194 (283)
T ss_dssp E-ECTTCEECTTCEE
T ss_pred E-ECCCcEECCCCeE
Confidence 3 4777777766653
No 61
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.32 E-value=1.8e-11 Score=129.86 Aligned_cols=347 Identities=13% Similarity=0.133 Sum_probs=192.9
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCcccccc-CcccchhHhHHHHHhcCCc-----EEEEEcc-cChhHHHHHHH-h-ccc
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVA-GCYRLIDIPMSNCINSGIN-----KIFVLTQ-FNSASLNRHIA-R-TYF 134 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~-g~p~LId~~L~~l~~~GI~-----~I~Iv~~-~~~~~l~~~l~-~-~y~ 134 (497)
.+.+||||+|.||||+ ...||+|+||+ |+ |++++.++++...|.. .++|.+. +.++.+.+|+. + .||
T Consensus 75 k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~f 150 (505)
T 2oeg_A 75 STVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPWL 150 (505)
T ss_dssp TEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHHH
T ss_pred cceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhcc
Confidence 6799999999999998 67999999999 99 6999999999987533 4555554 55788888886 3 234
Q ss_pred CCC---cc-cCCCeEEEeeC-ccCCC--C---CCCccccChHHHHHHHHH--HhhhhccCCCCcEEEEcCCeeec-cCHH
Q 010922 135 GNG---TN-FGDGFVEVLAA-TQTPG--E---SGKNWFQGTADAVRQFTW--VFEDAKNRNIENVAILCGDHLYR-MDYM 201 (497)
Q Consensus 135 ~~g---~~-~~~~~VeIl~~-~~~~~--e---~~~~~~~GTa~aL~~~~~--~i~~~~~~~~e~~LVl~gD~l~~-~dl~ 201 (497)
+.. +. |..+.+-.+.. ...+- + .-...+.|||++++.+.. .+++......+.++|.++|.+.. .|+
T Consensus 151 Gl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~- 229 (505)
T 2oeg_A 151 YQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK- 229 (505)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH-
T ss_pred CCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH-
Confidence 431 11 11110101100 00000 0 001124699999975511 11211123568999999999884 577
Q ss_pred HHHHHHHHcCCCeEEEEeeeCCCCCCcceEEEEC------CCCC---------EEEEeecCCccccccccccccccCCCc
Q 010922 202 DFIQSHVDRDADITISCAAVGESRASDYGLVKID------NMGR---------IAQFAEKPSGANLKAMQVDTSLLGFSP 266 (497)
Q Consensus 202 ~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d------~~g~---------V~~~~EKp~~~~~~~~~~~~~~~~~~~ 266 (497)
.++..|.++++++++.+.+.... ...+|++..+ .+|+ ++++.+-|....... + +
T Consensus 230 ~llg~~~~~~ad~~~~v~~k~~~-d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~----~---g--- 298 (505)
T 2oeg_A 230 RVLAYMEKEKIDFLMEVCRRTES-DKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESF----Q---D--- 298 (505)
T ss_dssp HHHHHHHHHTCSEEEEEEECCTT-CCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHH----H---C---
T ss_pred HHHHHHHhcCCcEEEEEEEecCC-ccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcc----c---C---
Confidence 99999999999999999887652 1368888763 4566 333334343321100 0 0
Q ss_pred cccccCCccceeeEEEEcHHHHHHHHhhh-----CCC-----CC--------------chhhhhHHhhhccCceEEEEec
Q 010922 267 QEARKCPYVASMGVYVFKKDVLFKLLRWR-----YPT-----SN--------------DFGSEIIPAAIMEHDVQAYIFR 322 (497)
Q Consensus 267 ~~~~~~~~l~~~Giyif~~~vL~~ll~~~-----~~~-----~~--------------d~~~~ii~~li~~~~v~~~~~~ 322 (497)
.......++...+|+-+.|.++++.. .|. .. .|..++++.+ .+..++.++
T Consensus 299 ---~~~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~---~~~~~~~V~ 372 (505)
T 2oeg_A 299 ---INKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMF---ESASAIVVP 372 (505)
T ss_dssp ---TTTTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSC---TTCEEEECC
T ss_pred ---ccccCeeEEEEEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhc---CcceEEEec
Confidence 00123478999999999998887752 110 00 1111222211 234444442
Q ss_pred c-EEEecCCHHHHHHHHHHhhcCCCCcccc-CCCCCCCCCCccCCCeEEcC---eEee--ceEECCCC-EEcceEEeeeE
Q 010922 323 D-YWEDIGTIKSFYEANMALTKESPAFHFY-DPKTPFYTSPRFLPPTKIDN---CRIK--DAIISHGC-FLRECTVEHSI 394 (497)
Q Consensus 323 g-~w~dIgt~~~y~~An~~l~~~~~~~~~~-~~~~~i~~~~~~~~~~~i~~---~~i~--~s~I~~~~-~i~~~~v~~sv 394 (497)
. -+.-+-+..+++.+..++........+. .+.. + ...|.+.++. ..+. ...+..|. .|.++ .+-+
T Consensus 373 R~~FsPvKn~~dl~~~~sdly~~~~~~~~~~~~~~-~----~~~p~i~l~p~~~~~~~~~~~r~~~g~psi~~~--~~L~ 445 (505)
T 2oeg_A 373 RSRFAPVKTCADLLALRSDAYVVTDDFRLVLDDRC-H----GHPPVVDLDSAHYKMMNGFEKLVQHGVPSLVEC--KRVT 445 (505)
T ss_dssp GGGCCCCSSHHHHHHHHSTTEEECTTCCEEECGGG-T----TCCCEEEECHHHHSSHHHHHHHSTTCCCBCTTE--EEEE
T ss_pred cceeecccCCCCHHHHHHHHHhhcCCceEEEcccc-c----CcCCeEEEChhHcCcHHHHHHhcCCCCCccccC--cEEE
Confidence 2 3556667777777666655433211111 1100 0 0122223321 1111 12333431 33332 2335
Q ss_pred EcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCC
Q 010922 395 VGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNV 452 (497)
Q Consensus 395 Ig~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~ 452 (497)
|.-.+..+.++.|+++++..++ ....++.|.+|+.++|..|...-
T Consensus 446 v~G~~~f~~~v~l~G~v~i~a~-------------~~~~~~~ip~g~~l~n~~~~~~~ 490 (505)
T 2oeg_A 446 VKGLVQFGAGNVLTGTVTIENT-------------DSASAFVIPDGAKLNDTTASPQQ 490 (505)
T ss_dssp EESSEECCTTCEEEEEEEEECC-------------SCSSCEECCTTCEEESCEECC--
T ss_pred EEcceEEccCcEEEEEEEEEec-------------CCCCcEEeCCCCEEeCceechhh
Confidence 5556677788888888776541 01123677777788777666544
No 62
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.32 E-value=6.2e-12 Score=123.70 Aligned_cols=62 Identities=10% Similarity=0.135 Sum_probs=31.9
Q ss_pred eEeCCCcEe-eceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 435 IGVGRNTKI-RNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 435 ~~Ig~~~~i-~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
+.|+.++.| .+|.||+++.|+.++.+.....+++...++.++.|..+++ |+++++|++|+++
T Consensus 115 ~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~-Ig~~a~Vg~~s~V 177 (266)
T 3r0s_A 115 AFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVK-VGEGCMIAGASAL 177 (266)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCE-ECTTCEECSSCBB
T ss_pred ceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECCCcE-ECCCCEEccCCeE
Confidence 333333333 3455555555555555544444444444555555544433 4777777777654
No 63
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.32 E-value=2e-11 Score=129.54 Aligned_cols=214 Identities=14% Similarity=0.206 Sum_probs=144.0
Q ss_pred ccCCCceEEEEecCCCCCcccCCCCCCCCcccccc---CcccchhHhHHHHHhc--------C------CcEEEEEcccC
Q 010922 59 KVKPGVAYAVMTSKHPNEVMTLAPPRAATPAVPVA---GCYRLIDIPMSNCINS--------G------INKIFVLTQFN 121 (497)
Q Consensus 59 ~~~~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~---g~p~LId~~L~~l~~~--------G------I~~I~Iv~~~~ 121 (497)
.++...|.+||||+|.|||| +...||+|+||+ |+ |++++.++++... | |..+++...+.
T Consensus 98 ~i~~gkvavvlLaGG~GTRL---g~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t 173 (486)
T 2yqc_A 98 AIGNGEVAVLLMAGGQGTRL---GSSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPT 173 (486)
T ss_dssp HHHTTCEEEEEEEESBCGGG---TCSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGG
T ss_pred HHhhCCeEEEEEcCCccccC---CCCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCC
Confidence 34556789999999999998 568999999999 99 5999999999876 7 88888888888
Q ss_pred hhHHHHHHHhc-ccCCCcccCCCeEEE-----eeCccCCCCCC-----------CccccChHHHHHHHHH--HhhhhccC
Q 010922 122 SASLNRHIART-YFGNGTNFGDGFVEV-----LAATQTPGESG-----------KNWFQGTADAVRQFTW--VFEDAKNR 182 (497)
Q Consensus 122 ~~~l~~~l~~~-y~~~g~~~~~~~VeI-----l~~~~~~~e~~-----------~~~~~GTa~aL~~~~~--~i~~~~~~ 182 (497)
++.+.+|+.+. ||+.... .|.+ +++-.. +| ...+.|+|+.++.... .+++....
T Consensus 174 ~~~t~~~~~~~~~fgl~~~----~v~~f~Q~~~P~i~~---dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~ 246 (486)
T 2yqc_A 174 RNATESFFIENNYFGLNSH----QVIFFNQGTLPCFNL---QGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSK 246 (486)
T ss_dssp HHHHHHHHHHTGGGGSCGG----GEEEEECCEEECBCT---TSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHhhccccCCCcc----eEEEEecccceeEcC---CCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhc
Confidence 88899999652 4543211 1221 111100 11 0124699998876532 23333335
Q ss_pred CCCcEEEEcCCeeec--cCHHHHHHHHHHcCCCeEEEEeeeCCCCCCcceEEEECC-CC--CEEEEeecCCccccccccc
Q 010922 183 NIENVAILCGDHLYR--MDYMDFIQSHVDRDADITISCAAVGESRASDYGLVKIDN-MG--RIAQFAEKPSGANLKAMQV 257 (497)
Q Consensus 183 ~~e~~LVl~gD~l~~--~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d~-~g--~V~~~~EKp~~~~~~~~~~ 257 (497)
+.+.+.+.+.|.+.- .|. .++..|.++++++++.+.+...+ ...+|++...+ +| +|+++.|+|.......
T Consensus 247 G~~yi~v~~vDN~l~~~~Dp-~~lg~~~~~~~~~~~~vv~k~~~-~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~--- 321 (486)
T 2yqc_A 247 GIKHIHMYCVDNCLVKVADP-IFIGFAIAKKFDLATKVVRKRDA-NESVGLIVLDQDNQKPCVIEYSEISQELANKK--- 321 (486)
T ss_dssp TCCEEEEEETTBTTCCTTCH-HHHHHHHHHTCSEEEEEEECCST-TCCCCEEEEETTTTEEEEECGGGSCHHHHHCE---
T ss_pred CCeEEEEECCCCceeeccCH-HHHHHHHHcCCCEEEEEEEcCCC-CCceeEEEEEecCCCEEEEEEecCCHHHhhcc---
Confidence 678999999997654 354 67889999999999988876432 24688777531 45 5888888876421100
Q ss_pred cccccCCCccccccCCccceeeEEEEcHHHHHHHHhh
Q 010922 258 DTSLLGFSPQEARKCPYVASMGVYVFKKDVLFKLLRW 294 (497)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~Giyif~~~vL~~ll~~ 294 (497)
+.. ++. ....+..++|+|+|+.++|.+.++.
T Consensus 322 ~~~----~~~--~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 322 DPQ----DSS--KLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp ETT----EEE--EESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred ccc----ccc--cccccceeEEEEEEeHHHHHHHHHh
Confidence 000 000 0123678999999999999875554
No 64
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.30 E-value=5.1e-11 Score=112.94 Aligned_cols=115 Identities=10% Similarity=0.070 Sum_probs=81.4
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCe
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGF 144 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~ 144 (497)
|.|||||+|.|+||. .||+|+|++|+ |||+|+++.+..+ +|+|++++ .+.+. .+.+. ++
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~~-~~~~~-------~~--- 59 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQAE-KLSSR-------YE--- 59 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHHH-HHHTT-------SC---
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHHH-HHHHh-------cC---
Confidence 789999999999995 69999999999 5999999999877 99999974 23332 23221 22
Q ss_pred EEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCee-ec-cCHHHHHHHHHHcCCCeEE
Q 010922 145 VEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL-YR-MDYMDFIQSHVDRDADITI 216 (497)
Q Consensus 145 VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l-~~-~dl~~ll~~h~~~~a~~tl 216 (497)
+.++.... + -.|...+|+.+...+ . +.+ ++.||.- .. ..+..+++.+.++++++.+
T Consensus 60 ~~~v~d~~-~-------~~G~~~si~~gl~~~-~------~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 60 AEFIWDLH-K-------GVGSIAGIHAALRHF-G------SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp SCEECCTT-C-------CCSHHHHHHHHHHHH-S------SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred CeEEecCC-C-------CCChHHHHHHHHHHc-C------CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 23343221 1 148889999988766 2 678 9999983 34 3567777776655555444
No 65
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.30 E-value=1e-11 Score=122.03 Aligned_cols=143 Identities=13% Similarity=0.108 Sum_probs=68.7
Q ss_pred cCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEc-------------ceEEe
Q 010922 351 YDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELK-------------DTVML 413 (497)
Q Consensus 351 ~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~-------------~s~i~ 413 (497)
++|.+.+.+.+.+.+++.|. .|.|. ++.||++|.|+ .+.|. +++||++|+|++++.|. +..+.
T Consensus 10 I~p~a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG 89 (265)
T 4e6u_A 10 IHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIG 89 (265)
T ss_dssp BCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEEC
T ss_pred ECCCCEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEEC
Confidence 34444444444444444442 24442 35555555555 34443 46666666666666662 22222
Q ss_pred CCccccchhHHH---------HhhcCCCcceEeCCCcEe-eceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccE
Q 010922 414 GADYYQTESEIA---------SLLAEGKVPIGVGRNTKI-RNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGIT 483 (497)
Q Consensus 414 ~~~~~~~~~~~~---------~~~~~~~~~~~Ig~~~~i-~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~ 483 (497)
++..++..+.+. +.++++ +.|+.++.| .+|+||+++.|+.++.+.....+++...++.++.|..+++
T Consensus 90 ~~~~Ig~~~~I~~g~~~~~~~~~IG~~---~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~ 166 (265)
T 4e6u_A 90 NNNLIREHCSLHRGTVQDNALTKIGSH---NLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCK 166 (265)
T ss_dssp SSCEECTTCEEECCCTTTTSEEEECSS---CEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCE
T ss_pred CCeEECCceEECcccccCCCceEEccC---cEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCCcE
Confidence 222222222221 111111 334444444 3455555555555555555444555555555555555533
Q ss_pred EEccCcEECCCccC
Q 010922 484 IIMEKATIEDGMVI 497 (497)
Q Consensus 484 vi~~~~~i~~g~~i 497 (497)
|+++++|++|+++
T Consensus 167 -Ig~~~~i~~~svV 179 (265)
T 4e6u_A 167 -IDSYSMIGGASLI 179 (265)
T ss_dssp -ECTTCEECTTCEE
T ss_pred -ECCCCEEcCCCEE
Confidence 4777777777654
No 66
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.30 E-value=5.4e-11 Score=122.64 Aligned_cols=213 Identities=11% Similarity=0.088 Sum_probs=144.7
Q ss_pred ccCCCceEEEEecCCCCCcccCCCCCCCCccccc---cCcccchhHhHHHHHh-------------cCCcEEEEEcccCh
Q 010922 59 KVKPGVAYAVMTSKHPNEVMTLAPPRAATPAVPV---AGCYRLIDIPMSNCIN-------------SGINKIFVLTQFNS 122 (497)
Q Consensus 59 ~~~~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI---~g~p~LId~~L~~l~~-------------~GI~~I~Iv~~~~~ 122 (497)
.++...+.+|+||+|.||||. ...||+|+|| .|+ |++++.++++.+ .+|.-+++...+.+
T Consensus 30 ~i~~gkvavvlLAGG~GTRLG---~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~ 105 (405)
T 3oc9_A 30 LISQGKTALITPAGGQGSRLG---FEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETI 105 (405)
T ss_dssp HHHTTCEEEEEECCSBCTTTT---CCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTH
T ss_pred HHhcCceEEEEecCCCccccc---CCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccH
Confidence 344557899999999999984 5799999999 899 699999988863 57876766666778
Q ss_pred hHHHHHHHh-cccCCCcccCCCeEEE-----eeCccCCC----C--CC-CccccChHHHHHHHHH--HhhhhccCCCCcE
Q 010922 123 ASLNRHIAR-TYFGNGTNFGDGFVEV-----LAATQTPG----E--SG-KNWFQGTADAVRQFTW--VFEDAKNRNIENV 187 (497)
Q Consensus 123 ~~l~~~l~~-~y~~~g~~~~~~~VeI-----l~~~~~~~----e--~~-~~~~~GTa~aL~~~~~--~i~~~~~~~~e~~ 187 (497)
+.+.+++.+ .||+.... .|.. ++.-...+ + .. ...+.|+++..+.... .+++....+.+.+
T Consensus 106 e~t~~~f~~~~~fGl~~~----~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi 181 (405)
T 3oc9_A 106 EEINNYFKEHQYFGLSSE----QIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYS 181 (405)
T ss_dssp HHHHHHHHHTGGGGSCTT----SEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEE
T ss_pred HHHHHHHHhCcccCCCcc----ceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEE
Confidence 889999865 34543210 1221 11100000 0 00 0123689888876432 2343334567899
Q ss_pred EEEcCCe-eeccCHHHHHHHHHHcCCCeEEEEeeeCCCCCCcceEEEE-CCCCCEEEEeecCCccccccccccccccCCC
Q 010922 188 AILCGDH-LYRMDYMDFIQSHVDRDADITISCAAVGESRASDYGLVKI-DNMGRIAQFAEKPSGANLKAMQVDTSLLGFS 265 (497)
Q Consensus 188 LVl~gD~-l~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~-d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~ 265 (497)
+|.++|. +.....-.++..|.++++++++-+.+..++ ....|++.. |...+|+++.|.|+. .... ..+-
T Consensus 182 ~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~-dek~Gvl~~~dg~~~vvEysei~~e-~e~~-~~~g------ 252 (405)
T 3oc9_A 182 VAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFK-EEKVGVLVKEQERIKVVEYTELTDE-LNKQ-LSNG------ 252 (405)
T ss_dssp EEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCST-TCSCCEEEEETTEEEEECGGGCCTT-TTCB-CTTS------
T ss_pred EEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCC-CCccceEEEECCeeEEEEEeeCCHH-Hhhc-CCCC------
Confidence 9999999 888888899999999999999998887652 146887764 544578888888775 2110 0000
Q ss_pred ccccccCCccceeeEEEEcHHHHHHHH
Q 010922 266 PQEARKCPYVASMGVYVFKKDVLFKLL 292 (497)
Q Consensus 266 ~~~~~~~~~l~~~Giyif~~~vL~~ll 292 (497)
....+..+.++++|+.++|.+++
T Consensus 253 ----~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 253 ----EFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp ----CBSSCEEEEEEEEEEHHHHHHHT
T ss_pred ----ceeeccceeEeeecCHHHHHHhh
Confidence 01235678999999999998875
No 67
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.29 E-value=2.1e-11 Score=113.84 Aligned_cols=117 Identities=15% Similarity=0.276 Sum_probs=80.1
Q ss_pred ccCCCCCCCCCCccCCCeEEcCeEeeceEECCCCEEc-ceEE----eeeEEcCCcEECCCCEEc------ceEEeCCccc
Q 010922 350 FYDPKTPFYTSPRFLPPTKIDNCRIKDAIISHGCFLR-ECTV----EHSIVGERSRLDYGVELK------DTVMLGADYY 418 (497)
Q Consensus 350 ~~~~~~~i~~~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v----~~svIg~~~~i~~~~~i~------~s~i~~~~~~ 418 (497)
+.++...+...+.+.|++.|.+ ++.||++|.|+ ++.| .+++||++|.|+++|.|. ++++.++
T Consensus 29 ~~~~~~~ig~~~~I~~~~~i~~----~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~--- 101 (191)
T 3ixc_A 29 YAGVSPSVDSTAFIAGNARIIG----DVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKF--- 101 (191)
T ss_dssp BTTBCCEECTTSEECTTCEEEE----EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTT---
T ss_pred ccCCCCEECCCCEECCCCEEeC----CcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCC---
Confidence 4445555555555666665532 34555555555 3444 356999999999999998 5665555
Q ss_pred cchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCcc
Q 010922 419 QTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 496 (497)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~ 496 (497)
+.||+++.|.+|+||++|.||++++|.+.. .+++++.|+.|.+ |.++..|+++++
T Consensus 102 ----------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~------~Ig~~~~Ig~gsv-V~~~~~i~~~~~ 156 (191)
T 3ixc_A 102 ----------------VTIGHSCILHACTLGNNAFVGMGSIVMDRA------VMEEGSMLAAGSL-LTRGKIVKSGEL 156 (191)
T ss_dssp ----------------CEECTTCEECSCEECTTCEECTTCEECTTC------EECTTCEECTTCE-ECTTCEECTTEE
T ss_pred ----------------CEECCCCEEECCEECCCCEECCCCEEeCCe------EECCCCEECCCCE-ECCCcCcCCCeE
Confidence 899999999999999999999999998653 3445555555533 355556666554
No 68
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.28 E-value=2.6e-11 Score=118.72 Aligned_cols=120 Identities=12% Similarity=0.196 Sum_probs=60.6
Q ss_pred ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEE-------------cceEEeCCc-cccchhHHHHhhcCCCcceEeCC
Q 010922 376 DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVEL-------------KDTVMLGAD-YYQTESEIASLLAEGKVPIGVGR 439 (497)
Q Consensus 376 ~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i-------------~~s~i~~~~-~~~~~~~~~~~~~~~~~~~~Ig~ 439 (497)
++.||++|+|+ .+.|. +++||++|.|++++.| ...+.+|++ .++..+.+..--. +.-++.||+
T Consensus 30 ~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~-~~~~~~IG~ 108 (259)
T 3hsq_A 30 NVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTK-EDSPTVIGN 108 (259)
T ss_dssp SCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSB-TTBCEEECS
T ss_pred CCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCcc-CCCcEEECC
Confidence 45555555555 34443 3677777777777777 344444432 2222222100000 001255666
Q ss_pred CcEee-ceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEE-----EccCcEECCCcc
Q 010922 440 NTKIR-NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITI-----IMEKATIEDGMV 496 (497)
Q Consensus 440 ~~~i~-~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~v-----i~~~~~i~~g~~ 496 (497)
++.|. +|.|++++.||+++.|.+...+.....+++++.|+.+.+| |++++.|++|++
T Consensus 109 ~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~Vg~~s~ 171 (259)
T 3hsq_A 109 KNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMVAGLAK 171 (259)
T ss_dssp SCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTTCEECSSEE
T ss_pred CcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCCCEECCCCE
Confidence 65553 4555556666666666555555555555555555555332 466666666654
No 69
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.28 E-value=1.5e-11 Score=121.06 Aligned_cols=66 Identities=18% Similarity=0.253 Sum_probs=29.3
Q ss_pred eEEcCCcEECCCCEEc-ceEEeCCccccchhHH--HHhhcCCCcceEeCCCcEee-ceEEcCCCEECCCcEEc
Q 010922 393 SIVGERSRLDYGVELK-DTVMLGADYYQTESEI--ASLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 393 svIg~~~~i~~~~~i~-~s~i~~~~~~~~~~~~--~~~~~~~~~~~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~ 461 (497)
++||++|.|++++.|. ++.+.++..++..+.| .+.++++ +.|+.++.|. +|+||+++.|+.++.|.
T Consensus 71 ~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~---~~Ig~~~~i~~~~~IG~~~~I~~~~~I~ 140 (273)
T 3fs8_A 71 LIIGENALIRTENVIYGDTIIGDNFQTGHKVTIRENTKIGNN---VKIGTLSDIQHHVYIGNYVNIHSNVFVG 140 (273)
T ss_dssp EEECTTCEECTTCEEESSCEECTTCEECSSCEECSSCEECSS---CEECTTCEECSSCEECSSCEECTTCEEC
T ss_pred eEECCCCEECCCCEEeCCCEECCCCEECCceEECCCCEECCC---CEECccceeCCceEECCceEECCCCEEC
Confidence 5666666666666663 3333222222222222 2222333 4444444442 45555555555554444
No 70
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.27 E-value=2.2e-11 Score=122.19 Aligned_cols=148 Identities=19% Similarity=0.220 Sum_probs=78.2
Q ss_pred ccCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEcc-----eEEeCCccccc
Q 010922 350 FYDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELKD-----TVMLGADYYQT 420 (497)
Q Consensus 350 ~~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~~-----s~i~~~~~~~~ 420 (497)
+++|.+.+.+.+.+.++++|. .|.|. ++.||++|.|+ .+.|. +++||++|.|++++.|.. +.+.++..++.
T Consensus 9 ~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~ 88 (305)
T 3t57_A 9 LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGH 88 (305)
T ss_dssp CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECT
T ss_pred eECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECC
Confidence 455666666666666666663 35553 56666666666 34444 556666666666665542 22222221111
Q ss_pred hhHH---------------------------HHhhcCCC---cceEeCCCcEe-eceEEcCCCEECCCcEEcCCCCCCCC
Q 010922 421 ESEI---------------------------ASLLAEGK---VPIGVGRNTKI-RNCIIDKNVKIGKDVVIVNKDDVQEA 469 (497)
Q Consensus 421 ~~~~---------------------------~~~~~~~~---~~~~Ig~~~~i-~~~iI~~~~~Ig~~~~i~~~~~v~~~ 469 (497)
.+.+ .+.+..|. -++.||+++.| .+|.|++++.||+++++.+...+...
T Consensus 89 ~a~Ig~~~q~~~~~~~~~~~i~IG~~~~I~~~~~I~~g~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~g~ 168 (305)
T 3t57_A 89 HAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIHRSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGH 168 (305)
T ss_dssp TCEEEECCCCTTCCTTCCEEEEECSSCEECTTCEEECCSSTTCCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred ccEeCccccccceecCCCceEEECCCcccCceEEEeecccccCccEEccCccccceEEEeCceEeCCceEECCCcccCCC
Confidence 1111 01111100 02556666666 35666666777777666665555555
Q ss_pred CCCCCCeEEccccEE-----EccCcEECCCccC
Q 010922 470 DRPELGFYIRSGITI-----IMEKATIEDGMVI 497 (497)
Q Consensus 470 ~~~~~~~~i~~g~~v-----i~~~~~i~~g~~i 497 (497)
..+++++.|+.+.+| ||++++|++|++|
T Consensus 169 v~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~V 201 (305)
T 3t57_A 169 VVVEDNTHTAGASVVHQFCHIGSFAFIGGGSVV 201 (305)
T ss_dssp CEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CEECCceEEcCCCEEcCCeEECCCCEEcCCCeE
Confidence 556666665555432 5777777777654
No 71
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.25 E-value=3.9e-11 Score=110.18 Aligned_cols=113 Identities=18% Similarity=0.324 Sum_probs=75.8
Q ss_pred CCCCCCCCCccCCCeEEcCeEeeceEECCCCEEc-ceEEee----eEEcCCcEECCCCEEc-----ceEEeCCccccchh
Q 010922 353 PKTPFYTSPRFLPPTKIDNCRIKDAIISHGCFLR-ECTVEH----SIVGERSRLDYGVELK-----DTVMLGADYYQTES 422 (497)
Q Consensus 353 ~~~~i~~~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v~~----svIg~~~~i~~~~~i~-----~s~i~~~~~~~~~~ 422 (497)
+...+...+.+.|++.+. .++.||++|.|+ ++.+.. ++||++|.|+++|.|. ++++.++
T Consensus 11 ~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~------- 79 (173)
T 1xhd_A 11 KKPKIASSAFIADYVTIT----GDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDD------- 79 (173)
T ss_dssp BCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTT-------
T ss_pred CCCEECCCcEECCCCEEE----CCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCC-------
Confidence 333444444455555443 256667777776 355543 8999999999999998 5555554
Q ss_pred HHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCc
Q 010922 423 EIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGM 495 (497)
Q Consensus 423 ~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~ 495 (497)
+.|++++.|.+|+||++|.||.+++|.....++ +++.|+.|.+ |.++..|++++
T Consensus 80 ------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig------~~~~Ig~~s~-V~~~~~i~~~~ 133 (173)
T 1xhd_A 80 ------------VTVGHQVILHSCHIKKDALIGMGSIILDGAEIG------EGAFIGAGSL-VSQGKKIPPNT 133 (173)
T ss_dssp ------------CEECTTCEEESCEECTTCEECTTCEECTTCEEC------TTCEECTTCE-ECTTCEECTTE
T ss_pred ------------CEECCCCEEeCCEECCCCEEcCCCEEcCCCEEC------CCCEECCCCE-ECCCcEeCCCC
Confidence 899999999999999999999999998654444 4444444432 24444444444
No 72
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.25 E-value=3.2e-11 Score=110.82 Aligned_cols=107 Identities=15% Similarity=0.207 Sum_probs=72.2
Q ss_pred cCCCCCCCCCCccCCCeEEcCeEeeceEECCCCEEc-ceEEe----eeEEcCCcEECCCCEEcce----EEeCCccccch
Q 010922 351 YDPKTPFYTSPRFLPPTKIDNCRIKDAIISHGCFLR-ECTVE----HSIVGERSRLDYGVELKDT----VMLGADYYQTE 421 (497)
Q Consensus 351 ~~~~~~i~~~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v~----~svIg~~~~i~~~~~i~~s----~i~~~~~~~~~ 421 (497)
.++...+.+++.+.|++.+.+ ++.||++|.|+ ++.+. .++||++|.|+++|.|... +.++++
T Consensus 7 ~~~~~~i~~~~~I~~~a~i~g----~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~----- 77 (173)
T 1v3w_A 7 NGKKPRIHPSAFVDENAVVIG----DVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEY----- 77 (173)
T ss_dssp TTBCCEECTTCEECTTSEEEE----EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSS-----
T ss_pred CCCCCEECCCCEECCCCEEeC----CEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCC-----
Confidence 334444555566666666633 35555555555 24443 4899999999999999842 444443
Q ss_pred hHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEc
Q 010922 422 SEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIR 479 (497)
Q Consensus 422 ~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~ 479 (497)
+.|++++.|.+|+||+++.||.++.|.+...+++...+++++.|.
T Consensus 78 -------------~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~ 122 (173)
T 1v3w_A 78 -------------VTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVP 122 (173)
T ss_dssp -------------CEECTTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred -------------CEECCCCEECCCEECCCCEECCCCEEeCCCEECCCCEECCCCEEC
Confidence 899999999999999999999999988755555444444444443
No 73
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.25 E-value=7e-12 Score=128.98 Aligned_cols=195 Identities=13% Similarity=0.080 Sum_probs=122.8
Q ss_pred eEEEEecCCCCCcccCCCCCCCCccccccCcccchhHhHHHHHh-cCCcEEEEEcccChhHHHHHHHhcccCCCcccCCC
Q 010922 65 AYAVMTSKHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCIN-SGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDG 143 (497)
Q Consensus 65 m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~-~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~ 143 (497)
|.|||||+|.|+||. ...||+|+|++|+ |||+|+++.+.+ .++++|+|+++ ..+.+. .+...
T Consensus 4 i~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~-----~~~~~------- 66 (371)
T 1w55_A 4 MSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMK-----KFTKN------- 66 (371)
T ss_dssp EEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHH-----TTCSS-------
T ss_pred cEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHH-----HHhCC-------
Confidence 689999999999997 3579999999999 599999999998 58999999998 433332 22111
Q ss_pred eEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCee-e-ccCHHHHHHHHHHcCCCeEEEEeee
Q 010922 144 FVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL-Y-RMDYMDFIQSHVDRDADITISCAAV 221 (497)
Q Consensus 144 ~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l-~-~~dl~~ll~~h~~~~a~~tl~~~~~ 221 (497)
++++... .|..++++.+...++ .+.++++.||.- . ...+..+++.+.+. +..+.+.+.
T Consensus 67 -v~~v~~g-----------~g~~~sv~~aL~~l~------~d~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~~~~~ 126 (371)
T 1w55_A 67 -YEFIEGG-----------DTRAESLKKALELID------SEFVMVSDVARVLVSKNLFDRLIENLDKA--DCITPALKV 126 (371)
T ss_dssp -SEEEECC-----------SSHHHHHHHHHTTCC------SSEEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEEEECC
T ss_pred -CEEEeCC-----------CChHHHHHHHHHhcC------CCeEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEEEEEe
Confidence 2333211 478899998876553 478999999983 3 44678888877654 344444444
Q ss_pred CCCCCCcceEEEECCCCCEEEEeecCCccccccccccccccCCCccccccCCcccee-eEEEEcHHHHHHHHhhhCCCCC
Q 010922 222 GESRASDYGLVKIDNMGRIAQFAEKPSGANLKAMQVDTSLLGFSPQEARKCPYVASM-GVYVFKKDVLFKLLRWRYPTSN 300 (497)
Q Consensus 222 ~~~~~~~~g~v~~d~~g~V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Giyif~~~vL~~ll~~~~~~~~ 300 (497)
.+. +.. + .+.+... .+... .-+.|+.+.|.+.++... ...
T Consensus 127 ~d~-------vk~-----v---~~t~~r~-----------------------~l~~~~~P~~f~~~~l~~~~~~~~-~~t 167 (371)
T 1w55_A 127 ADT-------TLF-----D---NEALQRE-----------------------KIKLIQTPQISKTKLLKKALDQNL-EFT 167 (371)
T ss_dssp CSC-------EEE-----T---TEEECGG-----------------------GCCEECSCEEEEHHHHHHHTSSCC-CCS
T ss_pred ecC-------eee-----e---eeecCcc-----------------------ceeecCCcceecHHHHHHHHHhcc-ccc
Confidence 331 010 0 0111110 01111 125688887766553321 001
Q ss_pred chhhhhHHhhhccCceEEEEeccEEEecCCHHHHHHHH
Q 010922 301 DFGSEIIPAAIMEHDVQAYIFRDYWEDIGTIKSFYEAN 338 (497)
Q Consensus 301 d~~~~ii~~li~~~~v~~~~~~g~w~dIgt~~~y~~An 338 (497)
+ ...++.. ...++..+..++.|.||+||+||..|+
T Consensus 168 d-~~~ll~~--~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 168 D-DSTAIAA--MGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp S-HHHHHHT--TTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred C-HHHHHHh--CCCcEEEEECCccccCCCCHHHHHHHH
Confidence 1 0112211 135677777778899999999998876
No 74
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.25 E-value=2.4e-11 Score=119.00 Aligned_cols=52 Identities=15% Similarity=0.251 Sum_probs=28.4
Q ss_pred CCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEc
Q 010922 357 FYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELK 408 (497)
Q Consensus 357 i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~ 408 (497)
+.+.+.+.+++.|. .|.|. ++.||++|+|+ ++.|. +++||++|.|+++|.|.
T Consensus 14 I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~ 69 (262)
T 2qia_A 14 VEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIG 69 (262)
T ss_dssp ECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEEC
Confidence 33333333444442 24443 46666666665 34444 57777777777777774
No 75
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.23 E-value=6.8e-11 Score=109.68 Aligned_cols=116 Identities=14% Similarity=0.219 Sum_probs=78.5
Q ss_pred cCCCCCCCCCCccCCCeEEcCeEeeceEECCCCEEc-ceEEe----eeEEcCCcEECCCCEE------------cceEEe
Q 010922 351 YDPKTPFYTSPRFLPPTKIDNCRIKDAIISHGCFLR-ECTVE----HSIVGERSRLDYGVEL------------KDTVML 413 (497)
Q Consensus 351 ~~~~~~i~~~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v~----~svIg~~~~i~~~~~i------------~~s~i~ 413 (497)
.+....+...+.+.|++.|.+ ++.||++|+|+ ++.+. +++||++|.|+++|.| .++++.
T Consensus 12 ~~~~~~ig~~~~I~~~~~i~~----~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig 87 (187)
T 3r3r_A 12 KNLFPGIGQRVMIDTSSVVIG----DVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIG 87 (187)
T ss_dssp TTBCCEECTTCEECTTCEEEE----EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEEC
T ss_pred cccCcccCCCeEECCCCEEEC----ceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEEC
Confidence 334445555666666666632 34555555555 23333 4699999999999999 444444
Q ss_pred CCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECC
Q 010922 414 GADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIED 493 (497)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~ 493 (497)
++ +.||+++.|.+|+||++|.||.+++|... ..+++++.|+.|.+ |.++..|++
T Consensus 88 ~~-------------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~------~~Ig~~~~Ig~~s~-V~~~~~i~~ 141 (187)
T 3r3r_A 88 ED-------------------VTVGHKVMLHGCTIGNRVLVGMGSIVLDG------AIIEDDVMIGAGSL-VPQHKRLES 141 (187)
T ss_dssp SS-------------------CEECTTCEEESCEECSSEEECTTCEECTT------CEECSSEEECTTCE-ECTTCEECT
T ss_pred CC-------------------CEECCCCEEeCcEECCCCEECCCCEECCC------CEECCCCEECCCCE-ECCCcCcCC
Confidence 44 89999999999999999999999999754 34455566666633 355566666
Q ss_pred Ccc
Q 010922 494 GMV 496 (497)
Q Consensus 494 g~~ 496 (497)
+++
T Consensus 142 ~~v 144 (187)
T 3r3r_A 142 GYL 144 (187)
T ss_dssp TEE
T ss_pred CcE
Confidence 654
No 76
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.23 E-value=8e-11 Score=109.31 Aligned_cols=115 Identities=21% Similarity=0.340 Sum_probs=78.5
Q ss_pred CCCCCCCCCccCCCeEEcCeEeeceEECCCCEEc-ceEE----eeeEEcCCcEECCCCEEcce-----------EEeCCc
Q 010922 353 PKTPFYTSPRFLPPTKIDNCRIKDAIISHGCFLR-ECTV----EHSIVGERSRLDYGVELKDT-----------VMLGAD 416 (497)
Q Consensus 353 ~~~~i~~~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v----~~svIg~~~~i~~~~~i~~s-----------~i~~~~ 416 (497)
....+...+.+.|++.|.+ ++.||++|.|+ ++.| .+++||++|.|++++.|..+ +.++++
T Consensus 18 ~~~~ig~~~~I~~~~~i~~----~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~ 93 (189)
T 3r1w_A 18 ISPKLGERVFVDRSSVIIG----DVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDD 93 (189)
T ss_dssp BCCEECTTCEECTTCEEEE----EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSS
T ss_pred cCCEECCCcEECCCCEEee----eeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCC
Confidence 3444555666666666643 34555555555 2333 45699999999999999874 344443
Q ss_pred cccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCcc
Q 010922 417 YYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMV 496 (497)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~ 496 (497)
+.||+++.|.+|+||++|.||.+++|..... +++++.|+.|.+ |.++..|+++++
T Consensus 94 ------------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~v~------Ig~~~~Ig~~s~-V~~g~~i~~~~v 148 (189)
T 3r1w_A 94 ------------------VTIGHQAMLHGCTIGNRVLIGMKSMIMDGAI------VEDEVIVAAGAT-VSPGKVLESGFV 148 (189)
T ss_dssp ------------------EEECTTCEEESCEECSSEEECTTCEECTTCE------ECSSCEECTTCE-ECTTCEECTTEE
T ss_pred ------------------CEECCCCEEeCcEECCCcEECCCCEEcCCCE------ECCCCEEccCCE-ECCCCEeCCCCE
Confidence 9999999999999999999999999975543 445555555533 355555565554
No 77
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.22 E-value=5.2e-11 Score=110.99 Aligned_cols=16 Identities=19% Similarity=0.544 Sum_probs=8.1
Q ss_pred eEEcCCCEECCCcEEc
Q 010922 446 CIIDKNVKIGKDVVIV 461 (497)
Q Consensus 446 ~iI~~~~~Ig~~~~i~ 461 (497)
++||++|.||.+++|.
T Consensus 103 ~~Ig~~v~IG~~~~I~ 118 (192)
T 3mqg_A 103 TIVRQGATLGANCTVV 118 (192)
T ss_dssp EEECTTCEECTTCEEC
T ss_pred cEECCCcEECCCCEEC
Confidence 4555555555555544
No 78
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.20 E-value=3.9e-11 Score=123.66 Aligned_cols=169 Identities=19% Similarity=0.268 Sum_probs=79.5
Q ss_pred EEecCCHHHHHHHHHHhhcCCCC-ccccCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCc
Q 010922 325 WEDIGTIKSFYEANMALTKESPA-FHFYDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERS 399 (497)
Q Consensus 325 w~dIgt~~~y~~An~~l~~~~~~-~~~~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~ 399 (497)
+.-+.+|+..+.....++...+. ...++|.+.+.+++.+.++++|. ++.|. ++.||++|.|+ ++.|. ++.||++|
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~~i~p~a~i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~ 174 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGG 174 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCSEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEEECCHHHHHHHHHHHhccccccccccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCc
Confidence 45567777766655666654432 33566766666666666666653 24443 34444444443 22221 23444444
Q ss_pred EECCCCEEcceEEeCCc-cccchhHH---------------------HHhhcCCCcceEeCCCcEe-----eceEEcCCC
Q 010922 400 RLDYGVELKDTVMLGAD-YYQTESEI---------------------ASLLAEGKVPIGVGRNTKI-----RNCIIDKNV 452 (497)
Q Consensus 400 ~i~~~~~i~~s~i~~~~-~~~~~~~~---------------------~~~~~~~~~~~~Ig~~~~i-----~~~iI~~~~ 452 (497)
.|+++++|.+.+.+|++ .++..+.| ...++++ +.||.|+.| .+++||+++
T Consensus 175 ~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~---v~IGa~~~I~~g~~~~t~IG~~~ 251 (372)
T 3pmo_A 175 WLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDD---VEIGANTTIDRGALSDTLIGNGV 251 (372)
T ss_dssp EECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECCCCCCEEECSS---CEECTTCEEECCSSSCEEECTTC
T ss_pred ccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcceeccccCCeEECCC---CEECCCcEEccCcccceEECCCC
Confidence 44434443333322221 11111110 1112222 444444444 345555555
Q ss_pred EECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 453 KIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 453 ~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
.|+.++.|.....+++.+.+..++.|..+ +.||++++|+.+++|
T Consensus 252 ~I~~~v~I~~~v~IG~~~~I~~~~~I~~~-v~IG~~~~Ig~~a~V 295 (372)
T 3pmo_A 252 KLDNQIMIAHNVQIGDHTAMAACVGISGS-AKIGRHCMLAGGVGL 295 (372)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTT-CEECSSCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCC-CEECCCeEEeCCCEE
Confidence 55555555544444444444444444443 345777777777654
No 79
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.20 E-value=1.1e-10 Score=110.91 Aligned_cols=115 Identities=18% Similarity=0.267 Sum_probs=80.8
Q ss_pred ccCCCeEEc-CeEe-eceEECCCCEEc-ceEEe-----eeEEcCCcEECCCCEEcce--------------EEeCCcccc
Q 010922 362 RFLPPTKID-NCRI-KDAIISHGCFLR-ECTVE-----HSIVGERSRLDYGVELKDT--------------VMLGADYYQ 419 (497)
Q Consensus 362 ~~~~~~~i~-~~~i-~~s~I~~~~~i~-~~~v~-----~svIg~~~~i~~~~~i~~s--------------~i~~~~~~~ 419 (497)
.+.+++.|. .+.+ .++.||++|.|+ ++.+. +++||++|.|+++|.|..+ +.+|++
T Consensus 41 ~i~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~--- 117 (213)
T 3kwd_A 41 EIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDN--- 117 (213)
T ss_dssp EECTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTT---
T ss_pred cCCCCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCC---
Confidence 344555553 3444 256777777777 45553 4799999999999999741 233332
Q ss_pred chhHHHHhhcCCCcceEeCCCcEeec-eEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 420 TESEIASLLAEGKVPIGVGRNTKIRN-CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 420 ~~~~~~~~~~~~~~~~~Ig~~~~i~~-~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
+.|++++.|.. ++||++|.||++++|.+ ..+++...+++++.|. + ++|++++.|++|+++
T Consensus 118 ---------------v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~-~~Ig~~~~Igags~V~-~-~~i~~~~~v~~~~vv 178 (213)
T 3kwd_A 118 ---------------VSITHMALIHGPAYIGDGCFIGFRSTVFN-ARVGAGCVVMMHVLIQ-D-VEIPPGKYVPSGMVI 178 (213)
T ss_dssp ---------------CEECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECSSCEEE-S-CEECTTBEECTTCEE
T ss_pred ---------------cEECCCcEEcCCCEECCCCEECCCCEEeC-cEECCCCEEcCCCEEC-C-cEeCCCCEECCCcEE
Confidence 78888888876 99999999999999886 5566666666666662 3 346888888888764
No 80
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.20 E-value=4.7e-11 Score=118.45 Aligned_cols=48 Identities=6% Similarity=0.159 Sum_probs=22.5
Q ss_pred CCCCCCCCCccCCCeEEcCeEeeceEECCCCEEcceEEeeeEEcCCcEECCCCEEc
Q 010922 353 PKTPFYTSPRFLPPTKIDNCRIKDAIISHGCFLRECTVEHSIVGERSRLDYGVELK 408 (497)
Q Consensus 353 ~~~~i~~~~~~~~~~~i~~~~i~~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~ 408 (497)
+...|++++.+.|+++|.. ++.|+++|+|++ ++.||++|.|++++.|.
T Consensus 21 ~~~~I~p~a~I~~~a~ig~----~v~Ig~~~~I~~----~v~IG~~~~I~~~~~I~ 68 (283)
T 4eqy_A 21 SMSRIHPTAIIEPGAQLHE----TVEVGPYAIVGS----NVTIGARTTIGSHSVIE 68 (283)
T ss_dssp --CCBCTTCEECTTCEECT----TCEECTTCEECT----TEEECTTCEECTTCEEC
T ss_pred CCcccCCCCEECCCCEECC----CCEECCCCEECC----CCEECCCCEECCCCEEC
Confidence 3444666666666666632 344444444441 33444444444444444
No 81
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.19 E-value=3.2e-10 Score=106.14 Aligned_cols=18 Identities=11% Similarity=0.093 Sum_probs=8.7
Q ss_pred EEecCCHHHHHHHHHHhh
Q 010922 325 WEDIGTIKSFYEANMALT 342 (497)
Q Consensus 325 w~dIgt~~~y~~An~~l~ 342 (497)
..-++++...++....+.
T Consensus 51 ~iaig~~~~r~~~~~~l~ 68 (194)
T 3bfp_A 51 FIAIGNNEIRKKIYQKIS 68 (194)
T ss_dssp EECCCCHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHH
Confidence 345555554444444443
No 82
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.19 E-value=1.4e-10 Score=113.44 Aligned_cols=18 Identities=6% Similarity=0.278 Sum_probs=11.8
Q ss_pred eeeEEcCCcEECCCCEEc
Q 010922 391 EHSIVGERSRLDYGVELK 408 (497)
Q Consensus 391 ~~svIg~~~~i~~~~~i~ 408 (497)
.+++||++|.|+++|.|.
T Consensus 78 ~~v~IG~~~~Ig~~~~I~ 95 (259)
T 3hsq_A 78 TKTVIGDHNIFREYSNIH 95 (259)
T ss_dssp CCEEECSSCEECTTCEEE
T ss_pred CcEEECCCcEECCCCEEC
Confidence 346666777777766665
No 83
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.18 E-value=5e-11 Score=111.52 Aligned_cols=127 Identities=11% Similarity=0.091 Sum_probs=71.9
Q ss_pred CccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe----eeEEcCCcEECCCCEEcceEEeCCccccchhHH-HHhhcCCC
Q 010922 361 PRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE----HSIVGERSRLDYGVELKDTVMLGADYYQTESEI-ASLLAEGK 432 (497)
Q Consensus 361 ~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~----~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~-~~~~~~~~ 432 (497)
+.+.|.+.|. ++.|. ++.||++|.|+ ++.+. +.+||++|.|+++|.|.++............+. ...++++
T Consensus 13 v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~- 91 (194)
T 3tv0_A 13 VKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTN- 91 (194)
T ss_dssp EEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSS-
T ss_pred CEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCc-
Confidence 3344444442 24432 45666666666 34442 468999999999999975543222111000000 1122333
Q ss_pred cceEeCCCcEeeceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 433 VPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 433 ~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
+.|++++.+.+|.|++++.||.++.|... ..+++++.|+.|.+ |.+++.|+++++|
T Consensus 92 --~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~g------v~IG~~~~Igagsv-V~~~~~Ip~~svv 147 (194)
T 3tv0_A 92 --NVFEVGCYSQAMKMGDNNVIESKAYVGRN------VILTSGCIIGACCN-LNTFEVIPENTVI 147 (194)
T ss_dssp --CEECTTCEECCSEECSSCEECTTCEECTT------EEECSSCEECTTCE-ECCCEEECTTEEE
T ss_pred --ceEecceeEeeeeecccceecceeeECCe------EEECCCCEECCCCE-ECCCcEECCCCEE
Confidence 67777777778888888888888888754 34455566666533 3666666666543
No 84
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.17 E-value=8.1e-11 Score=119.90 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=17.7
Q ss_pred ceEECCCCEEc-ceEE-eeeEEcCCcEECCCCEE
Q 010922 376 DAIISHGCFLR-ECTV-EHSIVGERSRLDYGVEL 407 (497)
Q Consensus 376 ~s~I~~~~~i~-~~~v-~~svIg~~~~i~~~~~i 407 (497)
++.||++|.|+ ++.| .+++||++|.|++++.|
T Consensus 145 ~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 178 (341)
T 3eh0_A 145 NSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVV 178 (341)
T ss_dssp TCEECTTCEECSSCEECTTCEECSSCEECTTCEE
T ss_pred CCEECCCcEECCCcEECCCCEECCccEEcCCcEE
Confidence 45555555554 2344 35666666666666666
No 85
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.16 E-value=1.2e-12 Score=139.04 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=79.5
Q ss_pred eEECCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECC
Q 010922 377 AIISHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGK 456 (497)
Q Consensus 377 s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~ 456 (497)
+.|+++|.|. .++.||++|.|+++|.|.++++..+ +.|+++|.|.+|+||++|.||.
T Consensus 280 a~I~p~a~i~----g~v~IG~~~~I~~~a~I~~v~IG~~-------------------~~I~~~~~I~~~vIG~~~~Ig~ 336 (496)
T 3c8v_A 280 ASVSGYAVIK----GDTVIGENVLVSQRAYLDNAWMGKG-------------------SNAQENCYIINSRLERNCVTAH 336 (496)
T ss_dssp CEECTTSEEE----SSCEECTTCEECTTCEEEEEEECTT-------------------CEECTTCEEEEEEEEESCEECT
T ss_pred cEECCCcEEe----CCeEECCCCEECCCcEEeceEecCC-------------------CEECCCceEeceEeCCCCEECC
Confidence 5555555554 3689999999999999966655444 8999999999999999999999
Q ss_pred CcEEcCCCCCCCCCCCCCCeEEccc---cEEEccCcEECCCccC
Q 010922 457 DVVIVNKDDVQEADRPELGFYIRSG---ITIIMEKATIEDGMVI 497 (497)
Q Consensus 457 ~~~i~~~~~v~~~~~~~~~~~i~~g---~~vi~~~~~i~~g~~i 497 (497)
+++|.+ ..+++...++.++.|..+ .++||+++.||+|++|
T Consensus 337 ~a~I~g-v~IGd~v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV 379 (496)
T 3c8v_A 337 GGKIIN-AHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTII 379 (496)
T ss_dssp TCEEES-EEEEETCEECTTCEEECCSSSCEEECTTCEECTTCEE
T ss_pred CcEEcC-ceECCCcEECCCCEEeCCCCcceEECCCCEECCCCEE
Confidence 999986 567788888888888776 1446999999999875
No 86
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.15 E-value=9e-11 Score=118.91 Aligned_cols=27 Identities=11% Similarity=0.190 Sum_probs=14.9
Q ss_pred eEeCCCcEeeceEEcCCCEECCCcEEc
Q 010922 435 IGVGRNTKIRNCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 435 ~~Ig~~~~i~~~iI~~~~~Ig~~~~i~ 461 (497)
+.|+++++|.+|+|+++|.|+.++.|.
T Consensus 152 ~~I~~~a~I~~s~I~~g~~I~~~a~I~ 178 (334)
T 2pig_A 152 LQIYDRATVNHSRIVHQVQLYGNATIT 178 (334)
T ss_dssp EEECTTCEEESCEEETTCEECTTCEEE
T ss_pred eEECCCCEEeccEEcCCCEEcCCeEEe
Confidence 555555555555555555555555444
No 87
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.15 E-value=1.2e-10 Score=114.10 Aligned_cols=87 Identities=13% Similarity=0.163 Sum_probs=51.0
Q ss_pred eeEEcCCcEECCCCEEcce-------EEeCCccccchhHHHHhhcCCCcceEeCCCcEe-eceEEcCCCEECCCcEEcCC
Q 010922 392 HSIVGERSRLDYGVELKDT-------VMLGADYYQTESEIASLLAEGKVPIGVGRNTKI-RNCIIDKNVKIGKDVVIVNK 463 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i~~s-------~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i-~~~iI~~~~~Ig~~~~i~~~ 463 (497)
+++||++|.|++++.|... +.+|++ +.|+.++.| .+|.||+++.|+.++.+...
T Consensus 83 ~~~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~------------------~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~ 144 (262)
T 2qia_A 83 RVEIGDRNRIRESVTIHRGTVQGGGLTKVGSD------------------NLLMINAHIAHDCTVGNRCILANNATLAGH 144 (262)
T ss_dssp EEEECSSCEECTTCEEECCCTTTTSEEEECSS------------------CEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred ceEECCCceeCCCCEEcCCccCCCCcCEECCC------------------cEEeeeeEECCCCEECCCeEECCcccccCC
Confidence 4666666666666666542 333332 555555555 35666666666666665555
Q ss_pred CCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 464 DDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 464 ~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
..+++...++.++.|..+++ |++++.|++|++|
T Consensus 145 v~Ig~~~~Ig~~~~I~~~v~-Ig~~~~ig~~s~V 177 (262)
T 2qia_A 145 VSVDDFAIIGGMTAVHQFCI-IGAHVMVGGCSGV 177 (262)
T ss_dssp CEECTTCEECTTCEECTTCE-ECTTCEECSSCEE
T ss_pred cEECCCcEEccCCEECCCCE-ECCCCEEccCCEE
Confidence 45555555555555555544 5888888887764
No 88
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.14 E-value=5.4e-11 Score=125.13 Aligned_cols=133 Identities=22% Similarity=0.298 Sum_probs=89.0
Q ss_pred CCccCCCeEEc-CeEeeceEECCCCEEc-ceEEeeeEEcCCcEECCCCEEcce-EEeCCccccchhHH-HHhhcCCC---
Q 010922 360 SPRFLPPTKID-NCRIKDAIISHGCFLR-ECTVEHSIVGERSRLDYGVELKDT-VMLGADYYQTESEI-ASLLAEGK--- 432 (497)
Q Consensus 360 ~~~~~~~~~i~-~~~i~~s~I~~~~~i~-~~~v~~svIg~~~~i~~~~~i~~s-~i~~~~~~~~~~~~-~~~~~~~~--- 432 (497)
.+.++.++.|. ++.|.++.||++|.|+ ++.+.+++||++|.|++++.|... .+..+..++..+++ .+.+.+|.
T Consensus 283 ~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~~~i~~~~~i~ 362 (456)
T 2v0h_A 283 NVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVN 362 (456)
T ss_dssp EEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEESCEECTTCEEE
T ss_pred CcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEeccEECCCCEec
Confidence 33445555553 4677788899999999 578888999999999999999844 44444555666655 23333331
Q ss_pred -----cceEeCCCcEee-ceEEcC-------CCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCc
Q 010922 433 -----VPIGVGRNTKIR-NCIIDK-------NVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGM 495 (497)
Q Consensus 433 -----~~~~Ig~~~~i~-~~iI~~-------~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~ 495 (497)
-++.||+++.|. +|+|.. +++||++|.|+....+.....++++++|+.|.+| .++ |++|+
T Consensus 363 ~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s~v-~~~--v~~~~ 435 (456)
T 2v0h_A 363 HLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTI-TRD--VGENE 435 (456)
T ss_dssp EEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTTCEE-CSC--BCTTC
T ss_pred cceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCCEE-CCC--cCCCC
Confidence 125788888885 666654 6777888777776666777777788888777554 333 44444
No 89
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.14 E-value=1.4e-10 Score=113.93 Aligned_cols=145 Identities=17% Similarity=0.227 Sum_probs=73.4
Q ss_pred CCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEc-------------ceEEeC
Q 010922 352 DPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELK-------------DTVMLG 414 (497)
Q Consensus 352 ~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~-------------~s~i~~ 414 (497)
+|.+.+.+.+.++++++|. .|.|. ++.||++|+|+ .+.|. +++||++|+|++++.|. ..+.+|
T Consensus 8 ~p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG 87 (266)
T 3r0s_A 8 HPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIG 87 (266)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEEC
T ss_pred CCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEEC
Confidence 3334333344444444442 23332 46666666666 34554 68888888888888884 233333
Q ss_pred Cc-cccchhHHHHhhcCCCcceEeCCCcEee-ceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEEC
Q 010922 415 AD-YYQTESEIASLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIE 492 (497)
Q Consensus 415 ~~-~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~ 492 (497)
++ .++..+.|..--..+.-++.||+++.|. +|.|++++.||+++.|.+...+.....+++++.|+.+.+ |.++++||
T Consensus 88 ~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~-V~~~v~Ig 166 (266)
T 3r0s_A 88 KNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTP-IHQFVKVG 166 (266)
T ss_dssp TTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCE-ECTTCEEC
T ss_pred CCCEECCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCE-ECCCcEEC
Confidence 32 2222222100000000114455555552 455555555555555555555555556666666665533 46666677
Q ss_pred CCccC
Q 010922 493 DGMVI 497 (497)
Q Consensus 493 ~g~~i 497 (497)
++++|
T Consensus 167 ~~a~V 171 (266)
T 3r0s_A 167 EGCMI 171 (266)
T ss_dssp TTCEE
T ss_pred CCCEE
Confidence 66654
No 90
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.14 E-value=1.5e-10 Score=113.57 Aligned_cols=55 Identities=18% Similarity=0.242 Sum_probs=23.1
Q ss_pred CCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCcEECCCCEEc
Q 010922 354 KTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERSRLDYGVELK 408 (497)
Q Consensus 354 ~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~~i~~~~~i~ 408 (497)
...+++++.+.|.++|. ++.|. .+.|++++.|+ +|.|. +++|+.+++||++|.|.
T Consensus 7 ~~~I~p~a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~ 65 (265)
T 4e6u_A 7 HDLIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIF 65 (265)
T ss_dssp -CCBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEEC
T ss_pred CCeECCCCEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEc
Confidence 34455555555555553 23332 23344444443 22232 33444444444444443
No 91
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.13 E-value=2.9e-10 Score=111.75 Aligned_cols=50 Identities=20% Similarity=0.262 Sum_probs=28.8
Q ss_pred CCCCCccCCCeEEc-CeEee-ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcce
Q 010922 357 FYTSPRFLPPTKID-NCRIK-DAIISHGCFLRECTVEHSIVGERSRLDYGVELKDT 410 (497)
Q Consensus 357 i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s 410 (497)
+.+++.+.|++.|. +++|. ++.|+++|.|++ +++||++|.|+++|.|.+.
T Consensus 5 i~~~~~I~~~a~I~~~~~Ig~~~~Ig~~~~I~~----~v~Ig~~~~I~~~~~I~~~ 56 (273)
T 3fs8_A 5 ISKSAIIKEGVIIGENVTIEDNVYIDYGCIIRD----NVHIKKGSFIGARSILGEY 56 (273)
T ss_dssp ECTTCEECTTCEECSSEEECTTCEECTTCEECS----SEEECTTCEECTTCEEEEC
T ss_pred cCCCeEECCCcEECCCCEECCCcEECCCCEECC----CCEECCCcEECCCcEeCCc
Confidence 34445555566553 34443 466666666652 4667777777777666553
No 92
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.12 E-value=2.1e-11 Score=122.56 Aligned_cols=36 Identities=28% Similarity=0.395 Sum_probs=15.8
Q ss_pred eEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccc
Q 010922 446 CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSG 481 (497)
Q Consensus 446 ~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g 481 (497)
++||++|.||.+++|.....+++...+++|++|..+
T Consensus 219 v~IGd~v~IG~~a~I~~gv~IG~g~vIgagsvV~~~ 254 (316)
T 3tk8_A 219 VIIEDNCFIGARSEVVEGVIVEENSVISMGVYLGQS 254 (316)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred cEECCCCEECCCCEEcCCCEECCCCEEcCCCEEcCC
Confidence 445555555555544443333333333344444433
No 93
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.12 E-value=2.2e-10 Score=117.38 Aligned_cols=61 Identities=16% Similarity=0.178 Sum_probs=29.5
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEE-----EccCcEECCCc
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITI-----IMEKATIEDGM 495 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~v-----i~~~~~i~~g~ 495 (497)
+.||++++|. ++.|++|++||+++.|.+..++.....+++++.|+.+.+| |+++++|++++
T Consensus 228 t~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~Ig~~~vv~g~s 294 (357)
T 4e79_A 228 TILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIADNVTLTGMS 294 (357)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSEEECTTC
T ss_pred ccccCCcccCCCcccCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEECCCCEEeecC
Confidence 3444444442 3444555555555555555555455555555555544332 34444444443
No 94
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.11 E-value=3.4e-10 Score=106.65 Aligned_cols=17 Identities=18% Similarity=0.161 Sum_probs=12.0
Q ss_pred eeEEcCCcEECCCCEEc
Q 010922 392 HSIVGERSRLDYGVELK 408 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i~ 408 (497)
+++||++|.|+++|.|.
T Consensus 70 ~v~IG~~~~I~~~~~I~ 86 (205)
T 3vbi_A 70 KVTIGSYSHIAAYTALY 86 (205)
T ss_dssp EEEECSSEEECTTCEEE
T ss_pred ceEECCCCEECCCeEEE
Confidence 56777777777777773
No 95
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.11 E-value=4.3e-10 Score=115.93 Aligned_cols=93 Identities=20% Similarity=0.324 Sum_probs=52.2
Q ss_pred cCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEE-eeeEEcCCcEECCCCEEcceEEeCCccccchhHHHH
Q 010922 351 YDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTV-EHSIVGERSRLDYGVELKDTVMLGADYYQTESEIAS 426 (497)
Q Consensus 351 ~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v-~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~ 426 (497)
+++.+.+.+.+.+.+++.|. ++.|. ++.||++|.|+ ++.| .+++||++|.|+++|.|.+.+..|++
T Consensus 127 i~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~---------- 196 (374)
T 2iu8_A 127 IHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKR---------- 196 (374)
T ss_dssp BCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTT----------
T ss_pred cCCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCC----------
Confidence 33444444445555555552 35554 56666666666 3444 34666666666666666444444443
Q ss_pred hhcCCCcceEeCCCcEee---------------------ceEEcCCCEECCCcEEc
Q 010922 427 LLAEGKVPIGVGRNTKIR---------------------NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 427 ~~~~~~~~~~Ig~~~~i~---------------------~~iI~~~~~Ig~~~~i~ 461 (497)
+.|+.++.|. +++||+++.||+|++|.
T Consensus 197 --------~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~ 244 (374)
T 2iu8_A 197 --------VIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTID 244 (374)
T ss_dssp --------CEECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEE
T ss_pred --------CEECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEc
Confidence 5666666552 36677777777776664
No 96
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.11 E-value=1.5e-10 Score=122.25 Aligned_cols=118 Identities=19% Similarity=0.243 Sum_probs=79.1
Q ss_pred CCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceE
Q 010922 360 SPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIG 436 (497)
Q Consensus 360 ~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~ 436 (497)
.+.+.+.+.|. ++.|. ++.||++|+|+ ++.|.+|+||++|.|+ ++.|.++.+..+ +.
T Consensus 274 ~~~i~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~-~~~i~~~~Ig~~-------------------~~ 333 (468)
T 1hm9_A 274 DVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVIT-NSMIEESSVADG-------------------VT 333 (468)
T ss_dssp TCEECTTCEECSSCEEESSCEECTTCEECTTCEEESCEECTTCEEC-SCEEESCEECTT-------------------CE
T ss_pred CcEECCCCEECCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEE-EEEEeccccCCC-------------------cE
Confidence 34445555553 35553 68899999998 5888899999999999 999999877666 77
Q ss_pred eCCCcEee-ceEEcCCCEECCCcEEcCC----------------CCCCCCCCCCCCeEEcc------ccEEEccCcEECC
Q 010922 437 VGRNTKIR-NCIIDKNVKIGKDVVIVNK----------------DDVQEADRPELGFYIRS------GITIIMEKATIED 493 (497)
Q Consensus 437 Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~----------------~~v~~~~~~~~~~~i~~------g~~vi~~~~~i~~ 493 (497)
||+++.|. +|+||++++||+++.|.++ ..+++.+.+++++.+.. +-++||+++.||+
T Consensus 334 Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~ 413 (468)
T 1hm9_A 334 VGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGS 413 (468)
T ss_dssp ECSSCEECSSCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECT
T ss_pred ECCceEEecCcEECCccEECCCcEEeeeEEcCCcEeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeEECC
Confidence 88888886 7777777777776655431 11233334444444422 1255677777777
Q ss_pred CccC
Q 010922 494 GMVI 497 (497)
Q Consensus 494 g~~i 497 (497)
|++|
T Consensus 414 ~~~i 417 (468)
T 1hm9_A 414 NSTI 417 (468)
T ss_dssp TCEE
T ss_pred CCEE
Confidence 7654
No 97
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.10 E-value=6.2e-10 Score=103.86 Aligned_cols=98 Identities=17% Similarity=0.318 Sum_probs=79.0
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcce---EEeCCccccchhHHHHhhcCCCcceEeCCCcEee------ce
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVELKDT---VMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR------NC 446 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s---~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~------~~ 446 (497)
++.|+++|.|. .++.||++|.|+++|.|..+ +.+|++ +.|++++.|. +|
T Consensus 39 ~~~I~~~~~i~----~~v~IG~~~~I~~~~~I~~~~~~i~IG~~------------------~~I~~~~~I~~~~~~g~~ 96 (191)
T 3ixc_A 39 TAFIAGNARII----GDVCIGKNASIWYGTVLRGDVDKIEVGEG------------------TNIQDNTVVHTDSMHGDT 96 (191)
T ss_dssp TSEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEECC----CCE
T ss_pred CCEECCCCEEe----CCcEECCCCEECCCCEEecCCCCeEECCC------------------CEECCCCEEeecCCcCCe
Confidence 46666677666 36789999999999999844 355654 8999999997 89
Q ss_pred EEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 447 IIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 447 iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
+||+++.||+++.|.+ ..+++...++.++.|..+++ |+++++|++|++|
T Consensus 97 ~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~I~~~~~-Ig~~~~Ig~gsvV 145 (191)
T 3ixc_A 97 VIGKFVTIGHSCILHA-CTLGNNAFVGMGSIVMDRAV-MEEGSMLAAGSLL 145 (191)
T ss_dssp EECTTCEECTTCEECS-CEECTTCEECTTCEECTTCE-ECTTCEECTTCEE
T ss_pred EECCCCEECCCCEEEC-CEECCCCEECCCCEEeCCeE-ECCCCEECCCCEE
Confidence 9999999999999986 45777778888888877754 5888888888865
No 98
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.10 E-value=5.7e-10 Score=109.95 Aligned_cols=51 Identities=18% Similarity=0.325 Sum_probs=30.2
Q ss_pred CCCCCccCCCeEEcCeEeeceEECCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeCC
Q 010922 357 FYTSPRFLPPTKIDNCRIKDAIISHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLGA 415 (497)
Q Consensus 357 i~~~~~~~~~~~i~~~~i~~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~~ 415 (497)
|++++.+.|+++|.. ++.|+++|.|+ .+++||++|.|+++|.|.+.+.+|.
T Consensus 4 I~p~a~I~~~a~Ig~----~~~Ig~~~~I~----~~v~IG~~~~I~~~~~I~g~~~IG~ 54 (270)
T 1j2z_A 4 IAKTAIISPKAEINK----GVEIGEFCVIG----DGVKLDEGVKLHNNVTLQGHTFVGK 54 (270)
T ss_dssp BCTTCEECTTSEECT----TCEECTTCEEC----TTCEECTTCEECTTCEECSEEEECT
T ss_pred cCCCCEECCCCEECC----CCEECCCCEEC----CCCEECCCCEEcCCcEEeCCeEEcC
Confidence 444444444444422 56677777776 2567777777777777775455544
No 99
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.10 E-value=2.5e-10 Score=115.64 Aligned_cols=89 Identities=17% Similarity=0.178 Sum_probs=55.9
Q ss_pred eEeeceEECCCCEEc-ceEEeeeEEcCCcEECCCCEEc-ceEEeCC----------ccccchhHH-HHhhcCCCcceEeC
Q 010922 372 CRIKDAIISHGCFLR-ECTVEHSIVGERSRLDYGVELK-DTVMLGA----------DYYQTESEI-ASLLAEGKVPIGVG 438 (497)
Q Consensus 372 ~~i~~s~I~~~~~i~-~~~v~~svIg~~~~i~~~~~i~-~s~i~~~----------~~~~~~~~~-~~~~~~~~~~~~Ig 438 (497)
|+|.++.|+++|.|+ ++.|++|+|+.+|+|..++++. ++.++++ .++...+.+ .+++.+| +.|+
T Consensus 96 ~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g---~~I~ 172 (334)
T 2pig_A 96 VWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDRATVNHSRIVHQ---VQLY 172 (334)
T ss_dssp CEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECTTCEEESCEEETT---CEEC
T ss_pred CEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECCCCEEeccEEcCC---CEEc
Confidence 455556666666666 4566666666666666666543 3333332 223333344 4667777 8888
Q ss_pred CCcEeeceEEcCCCEECCCcEEcCC
Q 010922 439 RNTKIRNCIIDKNVKIGKDVVIVNK 463 (497)
Q Consensus 439 ~~~~i~~~iI~~~~~Ig~~~~i~~~ 463 (497)
.++.|.+++|++++.|++++++...
T Consensus 173 ~~a~I~~svI~~~a~I~~~a~V~~~ 197 (334)
T 2pig_A 173 GNATITHAFIEHRAEVFDFALIEGD 197 (334)
T ss_dssp TTCEEESEEECTTCEECTTCEEECC
T ss_pred CCeEEeCcEEcCCCEECCCcEECCc
Confidence 8888888888888888888877654
No 100
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.07 E-value=2.3e-10 Score=120.44 Aligned_cols=79 Identities=20% Similarity=0.321 Sum_probs=47.4
Q ss_pred cCCCeEEc-CeEe-eceEECCCCEEc-ceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCC
Q 010922 363 FLPPTKID-NCRI-KDAIISHGCFLR-ECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGR 439 (497)
Q Consensus 363 ~~~~~~i~-~~~i-~~s~I~~~~~i~-~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~ 439 (497)
+++++.|. +|.| .++.||++|.|+ ++.+.+++||++|.|+++|.|.++.+..+ +.||+
T Consensus 271 ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~-------------------~~ig~ 331 (459)
T 4fce_A 271 HGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDAN-------------------CTVGP 331 (459)
T ss_dssp ECSSCEECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTT-------------------CEECS
T ss_pred ECCCcEECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCC-------------------CEECC
Confidence 44455553 3555 356677777777 46666777777777777777766555444 55555
Q ss_pred CcEee-ceEEcCCCEECCCcEE
Q 010922 440 NTKIR-NCIIDKNVKIGKDVVI 460 (497)
Q Consensus 440 ~~~i~-~~iI~~~~~Ig~~~~i 460 (497)
++.|. +++|++++.||+++.|
T Consensus 332 ~~~i~~~~~ig~~~~Ig~~~~i 353 (459)
T 4fce_A 332 FARLRPGAELAEGAHVGNFVEI 353 (459)
T ss_dssp SEEECTTCEECTTCEEEEEEEE
T ss_pred ccEECCCcEECCCcEECCCeEE
Confidence 55554 5555555555554443
No 101
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.07 E-value=1.2e-09 Score=100.14 Aligned_cols=98 Identities=20% Similarity=0.364 Sum_probs=79.3
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcce---EEeCCccccchhHHHHhhcCCCcceEeCCCcEee-----ceE
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVELKDT---VMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR-----NCI 447 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s---~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-----~~i 447 (497)
++.|+++|.|. .+++||++|.|++++.|... +.+|++ +.|++++.|. +++
T Consensus 18 ~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~v~IG~~------------------~~I~~~~~I~~~~~~~~~ 75 (173)
T 1xhd_A 18 SAFIADYVTIT----GDVYVGEESSIWFNTVIRGDVSPTIIGDR------------------VNVQDQCTLHQSPQYPLI 75 (173)
T ss_dssp TCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEEECCTTCCEE
T ss_pred CcEECCCCEEE----CCEEECCCcEEcCCcEEecCCCeEEECCC------------------CEECCCCEEEeCCCCCeE
Confidence 45667777665 46899999999999999874 556654 8999999998 899
Q ss_pred EcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 448 IDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 448 I~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
||+++.|+.++.|.+ ..+++.+.++.++.|..+++ ||++++|++|++|
T Consensus 76 Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~~~-Ig~~~~Ig~~s~V 123 (173)
T 1xhd_A 76 LEDDVTVGHQVILHS-CHIKKDALIGMGSIILDGAE-IGEGAFIGAGSLV 123 (173)
T ss_dssp ECTTCEECTTCEEES-CEECTTCEECTTCEECTTCE-ECTTCEECTTCEE
T ss_pred ECCCCEECCCCEEeC-CEECCCCEEcCCCEEcCCCE-ECCCCEECCCCEE
Confidence 999999999999975 35677778888888877754 5999999998864
No 102
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.05 E-value=6.6e-10 Score=109.83 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=16.3
Q ss_pred eEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccc
Q 010922 446 CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSG 481 (497)
Q Consensus 446 ~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g 481 (497)
++||+||.||.+++|.....+++...+++|+.|..+
T Consensus 178 v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~ 213 (276)
T 3gos_A 178 TIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQS 213 (276)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 555555555555555443333333333344444333
No 103
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.03 E-value=9.9e-10 Score=102.26 Aligned_cols=99 Identities=21% Similarity=0.272 Sum_probs=64.7
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEe-eceEEcCCCEE
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKI-RNCIIDKNVKI 454 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i-~~~iI~~~~~I 454 (497)
++.|+++|.|+ .++.||++|.|++++.|.+.+.+|++ +.|++++.| .++.|++++.|
T Consensus 21 ~~~I~~~~~I~----~~~~IG~~~~Ig~~~~I~~~~~IG~~------------------~~I~~~~~I~~~~~Ig~~~~i 78 (192)
T 3mqg_A 21 HSRIWHWVHIC----GGAEIGEGCSLGQNVFVGNRVRIGNR------------------VKIQNNVSVYDNVFLEDDVFC 78 (192)
T ss_dssp TCEECTTCEEC----TTCEECTTCEECTTCEECSSCEECSS------------------CEECTTCEECTTEEECTTCEE
T ss_pred CCEECCCCEEC----CCcEECCCCEECCCEEECCceEECCC------------------cEEcCCcEEeCCCEECCCCEE
Confidence 35555555555 24677888888888877765555554 778888877 47888888888
Q ss_pred CCCcEEcCCC---------------CCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 455 GKDVVIVNKD---------------DVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 455 g~~~~i~~~~---------------~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
|.++++.+.. .+++...++.++.|..|++ ||++++|++|++|
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~-Ig~~~~IgagsvV 135 (192)
T 3mqg_A 79 GPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCGAT-IGRYAFVGAGAVV 135 (192)
T ss_dssp CTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECTTCE-ECTTCEECTTCEE
T ss_pred CCceEEecccCCccccccccccCCcEECCCcEECCCCEECCCCE-ECCCCEEcCCCEE
Confidence 8887776522 2333344555555555533 5888888888764
No 104
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.03 E-value=1.6e-09 Score=108.60 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=24.7
Q ss_pred CCCCCCCCCCccCCCeEEcCeEeeceEECCCCEEcceEEeeeEEcCCcEECCCCEEc
Q 010922 352 DPKTPFYTSPRFLPPTKIDNCRIKDAIISHGCFLRECTVEHSIVGERSRLDYGVELK 408 (497)
Q Consensus 352 ~~~~~i~~~~~~~~~~~i~~~~i~~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~ 408 (497)
++.+.+++++.+.|.++|.. ++.|+++|.|+ .+++||++|.|+++++|.
T Consensus 5 ~~~~~I~p~A~I~~~a~Ig~----~v~Ig~~~~I~----~~v~IG~~~~I~~~~~I~ 53 (305)
T 3t57_A 5 DSEVLIHPSAVVHPNAVIGK----GVSVGPYCTIG----SSVKLGNGCKLYPSSHVF 53 (305)
T ss_dssp ----CBCTTSEECTTSEECT----TCEECTTCEEC----TTEEECTTCEECTTCEEC
T ss_pred CCCCeECCCCEECCCCEECC----CCEECCCCEEC----CCCEECCCCEECCCcEEC
Confidence 34555666666666666642 34455555554 234555555555555555
No 105
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.03 E-value=1.1e-09 Score=103.78 Aligned_cols=98 Identities=11% Similarity=0.095 Sum_probs=80.0
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcce----EEeCCccccchhHHHHhhcCCCcceEeCCCcEeec------
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVELKDT----VMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRN------ 445 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s----~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~------ 445 (497)
++.|+++|.|+ .+..||++|.|+++|.|... +.+|++ +.|++++.|..
T Consensus 45 ~~~I~~~a~i~----~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~------------------~~Ig~~~~I~~~~~~~~ 102 (213)
T 3kwd_A 45 TAYVHSFSNLI----GDVRIKDYVHIAPGTSIRADEGTPFHIGSR------------------TNIQDGVVIHGLQQGRV 102 (213)
T ss_dssp TCEECTTSEEE----ESEEECTTCEECTTCEEEESSSCCEEECTT------------------CEECTTCEEEECSSCCE
T ss_pred CCEECCCCEEe----CceEECCCCEEcCCcEEecCCCCceEECCC------------------CEECCCCEEEecCCCce
Confidence 46777777777 35799999999999999653 555654 89999999974
Q ss_pred ---------eEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 446 ---------CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 446 ---------~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
++||+++.|+.++.|.+...+++.+.+++++.|.. ++||++++|++|++|
T Consensus 103 ig~~~~~~~~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~--~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 103 IGDDGQEYSVWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFN--ARVGAGCVVMMHVLI 161 (213)
T ss_dssp ECTTSCEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEE--EEECTTCEECSSCEE
T ss_pred eccCCcccceEECCCcEECCCcEEcCCCEECCCCEECCCCEEeC--cEECCCCEEcCCCEE
Confidence 89999999999998887667777888888888864 668999999998875
No 106
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.02 E-value=8.2e-10 Score=110.54 Aligned_cols=27 Identities=11% Similarity=0.022 Sum_probs=12.6
Q ss_pred hhccCceEEEEec--cEEEecCCHHHHHH
Q 010922 310 AIMEHDVQAYIFR--DYWEDIGTIKSFYE 336 (497)
Q Consensus 310 li~~~~v~~~~~~--g~w~dIgt~~~y~~ 336 (497)
+++++++.+.... |.|..-..++...-
T Consensus 61 ~l~~g~~r~a~~~~~g~w~~~~w~kk~il 89 (304)
T 3eg4_A 61 LLDRGEVRVAEKQADGNWHVNQWLKKAVL 89 (304)
T ss_dssp HHHTTSSCSEEECTTSCEEECHHHHHHHH
T ss_pred HhcCCCeEEEEEcCCCceEEeeeeeeeee
Confidence 3344555554442 55655544444333
No 107
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.00 E-value=1.9e-09 Score=99.80 Aligned_cols=98 Identities=15% Similarity=0.250 Sum_probs=79.1
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcceE---EeCCccccchhHHHHhhcCCCcceEeCCCcEe---------
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVELKDTV---MLGADYYQTESEIASLLAEGKVPIGVGRNTKI--------- 443 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~---i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i--------- 443 (497)
++.|+++|.|. .++.||++|.|++++.|.... .+|++ +.|++++.|
T Consensus 21 ~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~------------------~~I~~~~~I~~~~~~~~~ 78 (187)
T 3r3r_A 21 RVMIDTSSVVI----GDVRLADDVGIWPLVVIRGDVNYVAIGAR------------------TNIQDGSVLHVTHKSSSN 78 (187)
T ss_dssp TCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEEECBCCBTTB
T ss_pred CeEECCCCEEE----CceEECCCCEECCCcEEEcCCccEEECCC------------------CEECCCCEEecCCccccC
Confidence 45666666665 468999999999999998643 66665 899999999
Q ss_pred ---eceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 444 ---RNCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 444 ---~~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
.+++||+++.||.++.|.+ ..+++.+.++.++.|..+++ |+++++|++|++|
T Consensus 79 ~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~I~~~~~-Ig~~~~Ig~~s~V 133 (187)
T 3r3r_A 79 PHGNPLIIGEDVTVGHKVMLHG-CTIGNRVLVGMGSIVLDGAI-IEDDVMIGAGSLV 133 (187)
T ss_dssp C-CBCEEECSSCEECTTCEEES-CEECSSEEECTTCEECTTCE-ECSSEEECTTCEE
T ss_pred CCCCCeEECCCCEECCCCEEeC-cEECCCCEECCCCEECCCCE-ECCCCEECCCCEE
Confidence 7899999999999999976 45777777788888877744 5889999888875
No 108
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.99 E-value=3e-09 Score=99.34 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=73.5
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEEc---ceEEeCCccccchhHHHHhhcCCCcceEeCCCcEee--------
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVELK---DTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR-------- 444 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~---~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-------- 444 (497)
+++|+++|.|++ +..||++|.|+++|.|. +.+.+|++ +.|++++.|.
T Consensus 18 ~a~I~~~a~I~g----~V~IG~~~~I~~~~~I~~~~g~i~IG~~------------------~~I~~~~~I~~~~~~~~~ 75 (194)
T 3tv0_A 18 GAVVCVESEIRG----DVTIGPRTVIHPKARIIAEAGPIVIGEG------------------NLIEEQALIINAYPDNIT 75 (194)
T ss_dssp TCEECTTSEEES----SEEECTTCEECTTCEEEESSSCEEECTT------------------CEECTTCEEEECCCSCC-
T ss_pred CCEEcCCCEEeC----CCEECCCCEECCCCEEccCCCCeEECCC------------------ccccCCcccccccccccc
Confidence 466777777763 67889999999998884 34555554 7788887774
Q ss_pred ---------ceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 445 ---------NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 445 ---------~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
+++||+++.|+.++.+.+ ..+++.+.++.++.|..|++ ||+|++|++|++|
T Consensus 76 ~~~~~~~~~~~~Ig~~~~i~~~~~i~~-~~Ig~~~~Ig~~~~I~~gv~-IG~~~~IgagsvV 135 (194)
T 3tv0_A 76 PDTEDPEPKPMIIGTNNVFEVGCYSQA-MKMGDNNVIESKAYVGRNVI-LTSGCIIGACCNL 135 (194)
T ss_dssp --------CCEEECSSCEECTTCEECC-SEECSSCEECTTCEECTTEE-ECSSCEECTTCEE
T ss_pred cccccCcCCceEECCcceEecceeEee-eeecccceecceeeECCeEE-ECCCCEECCCCEE
Confidence 367888888888888865 35677778888888887744 5999999988875
No 109
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.98 E-value=2.2e-09 Score=99.45 Aligned_cols=98 Identities=12% Similarity=0.214 Sum_probs=79.2
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcc---eEEeCCccccchhHHHHhhcCCCcceEeCCCcEeec-------
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVELKD---TVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRN------- 445 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~---s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~------- 445 (497)
++.|++++.|+ .++.||++|.|++++.|.. .+.+|++ +.|++++.|..
T Consensus 25 ~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~------------------~~I~~~~~I~~~~~~~~~ 82 (189)
T 3r1w_A 25 RVFVDRSSVII----GDVELGDDCSVWPLAVIRGDMHHIRIGAR------------------TSVQDGSVLHITHASDYN 82 (189)
T ss_dssp TCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEEECBCCSSSS
T ss_pred CcEECCCCEEe----eeeEECCCCEECCCCEEecCCCceEECCC------------------CEECCCCEEecCCcccCC
Confidence 46677777776 3789999999999999973 3466665 89999999975
Q ss_pred -----eEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 446 -----CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 446 -----~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
++||+++.||.++.|.+ ..+++.+.+++++.|..+++ |+++++|++|++|
T Consensus 83 ~~~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~v~-Ig~~~~Ig~~s~V 137 (189)
T 3r1w_A 83 PGGYPLIIGDDVTIGHQAMLHG-CTIGNRVLIGMKSMIMDGAI-VEDEVIVAAGATV 137 (189)
T ss_dssp TTCBCEEECSSEEECTTCEEES-CEECSSEEECTTCEECTTCE-ECSSCEECTTCEE
T ss_pred CCCCCeEECCCCEECCCCEEeC-cEECCCcEECCCCEEcCCCE-ECCCCEEccCCEE
Confidence 49999999999999986 56777778888888877754 5999999988875
No 110
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=98.98 E-value=2.5e-09 Score=98.06 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=72.6
Q ss_pred ccCCCCCCCCCCccCCCeEEc-CeEeec----eEECCCCEEc-ceEEe-----eeEEcCCcEECCCCEEcceEEeCCccc
Q 010922 350 FYDPKTPFYTSPRFLPPTKID-NCRIKD----AIISHGCFLR-ECTVE-----HSIVGERSRLDYGVELKDTVMLGADYY 418 (497)
Q Consensus 350 ~~~~~~~i~~~~~~~~~~~i~-~~~i~~----s~I~~~~~i~-~~~v~-----~svIg~~~~i~~~~~i~~s~i~~~~~~ 418 (497)
++++.+.+...+.+++++.|. ++.|.. +.||++|.|+ ++.+. +++||++|.|++++.|.++++.++
T Consensus 18 ~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~--- 94 (173)
T 1v3w_A 18 FVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNY--- 94 (173)
T ss_dssp EECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSS---
T ss_pred EECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCC---
Confidence 344545444445556666663 466643 7889999998 56776 589999999999999998877666
Q ss_pred cchhHHHHhhcCCCcceEeCCCcEee-ceEEcCCCEECCCcEEcC
Q 010922 419 QTESEIASLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVN 462 (497)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~ 462 (497)
+.||.++.|. +|.||+++.||+++++..
T Consensus 95 ----------------~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~ 123 (173)
T 1v3w_A 95 ----------------VIIGISSVILDGAKIGDHVIIGAGAVVPP 123 (173)
T ss_dssp ----------------EEECTTCEECTTCEECSSEEECTTCEECT
T ss_pred ----------------CEECCCCEEeCCCEECCCCEECCCCEECC
Confidence 8999999985 799999999999999874
No 111
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.97 E-value=3.5e-09 Score=99.59 Aligned_cols=51 Identities=16% Similarity=0.179 Sum_probs=30.2
Q ss_pred eeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEee----ceEEcCCCEECCCcEE
Q 010922 392 HSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR----NCIIDKNVKIGKDVVI 460 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~----~~iI~~~~~Ig~~~~i 460 (497)
+.+||++|.|+++|.|...+.+|++ +.|++++.|. +++||++|.|+++++|
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v~IG~~------------------~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKVTIGSY------------------SHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp GEEECSSEEECTTCEEEEEEEECSS------------------EEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred eeEECCCCEECCCCEEccceEECCC------------------CEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 3566666666666666555555554 6666666662 3666666666666666
No 112
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.97 E-value=9.1e-09 Score=97.89 Aligned_cols=119 Identities=16% Similarity=0.197 Sum_probs=54.1
Q ss_pred EEecCCHHHHHHHHHHhhcCCCCc-cccCCCCCCCCCCccCCCeEEc-CeEee-ceEECCCCEEc-ceEEe-eeEEcCCc
Q 010922 325 WEDIGTIKSFYEANMALTKESPAF-HFYDPKTPFYTSPRFLPPTKID-NCRIK-DAIISHGCFLR-ECTVE-HSIVGERS 399 (497)
Q Consensus 325 w~dIgt~~~y~~An~~l~~~~~~~-~~~~~~~~i~~~~~~~~~~~i~-~~~i~-~s~I~~~~~i~-~~~v~-~svIg~~~ 399 (497)
+.-|++++...+....+.+....+ .++++.+.+...+.+.+++.|. ++.|. ++.||++|.|+ ++.|. +++||++|
T Consensus 75 ~iAIg~~~~R~~i~~~l~~~g~~~~~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~ 154 (220)
T 4ea9_A 75 FVAIGDNRLRQKLGRKARDHGFSLVNAIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAAC 154 (220)
T ss_dssp EECCCCHHHHHHHHHHHHHTTCEECCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEecCCHHHHHHHHHHHHhcCCCcCCcCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCC
Confidence 445777666555555555432111 2344544444444444444442 23332 34444444444 23332 24444444
Q ss_pred EECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEee-ceEEcCCCEECCCcEEc
Q 010922 400 RLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 400 ~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~ 461 (497)
.|++++.|.+.+..+++ +.||.++.|. ++.||+++.||+++++.
T Consensus 155 ~i~~~~~i~~~v~Ig~~------------------~~Ig~~~~i~~~~~Ig~~~~igagsvv~ 199 (220)
T 4ea9_A 155 HLGPASALAGGVSVGER------------------AFLGVGARVIPGVTIGADTIVGAGGVVV 199 (220)
T ss_dssp EECTTCEECSSCEECTT------------------CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EECCCCEEcCCCEECCC------------------CEECCCCEEcCCcEECCCCEECCCCEEc
Confidence 44444444443333332 4455554442 44555555555555444
No 113
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=98.97 E-value=2.7e-09 Score=103.11 Aligned_cols=28 Identities=14% Similarity=0.362 Sum_probs=15.9
Q ss_pred eEeCCCcEe-eceEEcCCCEECCCcEEcC
Q 010922 435 IGVGRNTKI-RNCIIDKNVKIGKDVVIVN 462 (497)
Q Consensus 435 ~~Ig~~~~i-~~~iI~~~~~Ig~~~~i~~ 462 (497)
+.||.++.| .+|.||++|.|++++++..
T Consensus 172 ~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~ 200 (240)
T 3r8y_A 172 VVIGANVVVLEGVTVGKGAVVAAGAVVTE 200 (240)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CEECCCCEECCCcEECCCCEECCCCEECC
Confidence 555555555 4555555555555555543
No 114
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.95 E-value=1.6e-09 Score=112.01 Aligned_cols=83 Identities=16% Similarity=0.197 Sum_probs=55.6
Q ss_pred eEECCCCEEc-ceEE-eeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEE
Q 010922 377 AIISHGCFLR-ECTV-EHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKI 454 (497)
Q Consensus 377 s~I~~~~~i~-~~~v-~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~I 454 (497)
+.|+++|.|+ ++.+ .++.||++|.|+++|.|...+.+|++ +.||+++.|.+|+|++++.|
T Consensus 245 ~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~------------------~~ig~~~~i~~~~i~~~~~i 306 (401)
T 2ggo_A 245 VIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEK------------------NKIGASVEVKESVIMEGSKI 306 (401)
T ss_dssp EEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSS------------------CEEEETCEEESEEECTTCEE
T ss_pred eEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCC------------------CEECCCCEEecCEEcCCcEE
Confidence 4444444443 2333 35789999999999999866666664 88999999999999998888
Q ss_pred CCCcEEcCCCCCCCCCCCCCCeEE
Q 010922 455 GKDVVIVNKDDVQEADRPELGFYI 478 (497)
Q Consensus 455 g~~~~i~~~~~v~~~~~~~~~~~i 478 (497)
+.++.|.+ ..+++.+.+++++.|
T Consensus 307 ~~~~~i~~-~~Ig~~~~Ig~~~~i 329 (401)
T 2ggo_A 307 PHLSYVGD-SVIAEDVNFGAGTLI 329 (401)
T ss_dssp EESCEEES-CEECTTCEECTTCEE
T ss_pred CCCceEcc-eEECCCcEECCCcEE
Confidence 77666543 234444444444444
No 115
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.94 E-value=2.5e-09 Score=104.14 Aligned_cols=62 Identities=18% Similarity=0.283 Sum_probs=33.9
Q ss_pred eEeCCCcEee----ceEEcCCCEECCCcEEcCCC-------------------CCCCCCCCCCCeEEccccEEEccCcEE
Q 010922 435 IGVGRNTKIR----NCIIDKNVKIGKDVVIVNKD-------------------DVQEADRPELGFYIRSGITIIMEKATI 491 (497)
Q Consensus 435 ~~Ig~~~~i~----~~iI~~~~~Ig~~~~i~~~~-------------------~v~~~~~~~~~~~i~~g~~vi~~~~~i 491 (497)
+.||++++|. ++.||++|.||++++|.+++ .+++.+.++.++.|..|++ ||++++|
T Consensus 112 ~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~-IG~~~~I 190 (252)
T 3jqy_B 112 TTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVS-VGSGSVI 190 (252)
T ss_dssp CEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCE-ECTTCEE
T ss_pred CEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCE-ECCCCEE
Confidence 6666666665 56666666666666666552 2233333333444434422 4666666
Q ss_pred CCCccC
Q 010922 492 EDGMVI 497 (497)
Q Consensus 492 ~~g~~i 497 (497)
++|++|
T Consensus 191 gagsvV 196 (252)
T 3jqy_B 191 GYGSIV 196 (252)
T ss_dssp CTTCEE
T ss_pred CCCCEE
Confidence 666653
No 116
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.92 E-value=3.9e-09 Score=100.50 Aligned_cols=60 Identities=13% Similarity=0.271 Sum_probs=33.7
Q ss_pred eeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeec-eEEcCCCEECCCcEEcCCCCCCCC
Q 010922 392 HSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRN-CIIDKNVKIGKDVVIVNKDDVQEA 469 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~-~iI~~~~~Ig~~~~i~~~~~v~~~ 469 (497)
++.||++|.|+.++.|.+....+++ +.|++++.|.+ ++||++|.||.+++|.....+++.
T Consensus 129 ~~~IG~~~~I~~~~~I~~~~~Ig~~------------------~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~ 189 (220)
T 4ea9_A 129 DSWIGDLAIINTGAVVDHDCRLGAA------------------CHLGPASALAGGVSVGERAFLGVGARVIPGVTIGAD 189 (220)
T ss_dssp TCEECTTCEECTTCEECTTCEECTT------------------CEECTTCEECSSCEECTTCEECTTCEECTTCEECTT
T ss_pred CCEECCCCEECCCCEECCCCEECCC------------------CEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCC
Confidence 4566666666666666532222222 66666666643 677777777777766654333333
No 117
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.92 E-value=1e-09 Score=109.88 Aligned_cols=33 Identities=18% Similarity=0.427 Sum_probs=20.0
Q ss_pred eEeCCCcEe-eceEEcCCCEECCCcEEcCCCCCC
Q 010922 435 IGVGRNTKI-RNCIIDKNVKIGKDVVIVNKDDVQ 467 (497)
Q Consensus 435 ~~Ig~~~~i-~~~iI~~~~~Ig~~~~i~~~~~v~ 467 (497)
+.||.++.| .+|.||++|.||++++|.....++
T Consensus 209 v~IG~~a~I~~gv~IG~~avIgagsvV~~g~~Ig 242 (304)
T 3eg4_A 209 CFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIV 242 (304)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCCEE
T ss_pred CEECCCCEEcCCcEECCCcEECCCCEEcCCeEEC
Confidence 566666655 366666666666666666544433
No 118
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.90 E-value=3e-09 Score=105.12 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=19.5
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEcCCCCCC
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIVNKDDVQ 467 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~~~v~ 467 (497)
|.||.|+.|. ++.||++|.||+|++|.....++
T Consensus 184 v~IG~~a~I~~gv~IG~~avIgagsvV~~~~~I~ 217 (276)
T 3gos_A 184 CFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIY 217 (276)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCCEE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCcEEc
Confidence 5555555553 56666666666666666544443
No 119
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=98.89 E-value=7.2e-09 Score=100.60 Aligned_cols=97 Identities=10% Similarity=0.154 Sum_probs=64.5
Q ss_pred eEECCCCEEcceEEeeeEEcCCcEECCCCEEcce----EEeCCccccchhHHHHhhcCCCcceEeCCCcEee--------
Q 010922 377 AIISHGCFLRECTVEHSIVGERSRLDYGVELKDT----VMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR-------- 444 (497)
Q Consensus 377 s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s----~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-------- 444 (497)
+.|+++|.|. .++.||++|.|+++|.|... +.+|.+ +.|++++.|.
T Consensus 66 ~~I~~~a~I~----g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~------------------~~Ig~~~~I~~~~~~~~~ 123 (247)
T 1qre_A 66 AYIDPQASVI----GEVTIGANVMVSPMASIRSDEGMPIFVGDR------------------SNVQDGVVLHALETINEE 123 (247)
T ss_dssp CEECTTCEEE----ESEEECTTCEECTTCEEEESSSCCEEECTT------------------CEECTTCEEEECCSBCTT
T ss_pred cEECCCCEEe----CCcEECCCCEECCCcEEecCCCCCEEECCC------------------CEECCCeEEEeccccccc
Confidence 4555555554 24677777777777777653 244443 6777777774
Q ss_pred ----------------ceEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEEEccCcEECCCccC
Q 010922 445 ----------------NCIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITIIMEKATIEDGMVI 497 (497)
Q Consensus 445 ----------------~~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~vi~~~~~i~~g~~i 497 (497)
+++||+++.||+++.|.+...+++.+.++.++.|.. ++||++++|++|++|
T Consensus 124 g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~--v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 124 GEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFK--SKVGNNCVLEPRSAA 190 (247)
T ss_dssp SCBCGGGCEEETTEEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEE--EEECTTCEECTTCEE
T ss_pred CcccccceeeccCccCceEECCCCEECCCCEEcCCcEECCCCEECCCCEEec--eEECCCCEECCCCEE
Confidence 378888888888887776455666666777777655 556777777777764
No 120
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.83 E-value=1.5e-08 Score=94.66 Aligned_cols=33 Identities=9% Similarity=-0.184 Sum_probs=16.0
Q ss_pred chhhhhHHhhhc-cCceEEEEecc-EEEecCCHHH
Q 010922 301 DFGSEIIPAAIM-EHDVQAYIFRD-YWEDIGTIKS 333 (497)
Q Consensus 301 d~~~~ii~~li~-~~~v~~~~~~g-~w~dIgt~~~ 333 (497)
.|++++++.+.. .+++.+|..++ .|..+++.++
T Consensus 13 g~gk~v~~~~~~~~~~v~~f~Dd~~g~~vig~~~~ 47 (194)
T 3bfp_A 13 GHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPK 47 (194)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEC--------CCCCC
T ss_pred HHHHHHHHHHHhCCCeEEEEEeCCCCCeEECCccc
Confidence 345555554432 36788888764 6999988775
No 121
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.80 E-value=6.7e-09 Score=106.22 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=20.8
Q ss_pred EEEEeccEEEecCC--HHHHHHHHHHhhc
Q 010922 317 QAYIFRDYWEDIGT--IKSFYEANMALTK 343 (497)
Q Consensus 317 ~~~~~~g~w~dIgt--~~~y~~An~~l~~ 343 (497)
.++....+|.|.|+ |++|....+.+..
T Consensus 164 ~g~l~~~~Wt~~G~~~~~~f~~~~~~l~~ 192 (387)
T 2rij_A 164 FGLLSNVAWSDDKPIELEYLRANEMRLKM 192 (387)
T ss_dssp HHHSCCEEEETTEEECHHHHHHHHHHHHH
T ss_pred hccCceeeeccCcccCHHHHHHHHHHHHh
Confidence 33445679999999 7889888888774
No 122
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.80 E-value=1.3e-08 Score=102.25 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=24.8
Q ss_pred CCCccCCCeEEc-CeEeeceEECCCCEEc-ceEEee-eEEcCCcEECCCCEEcceEEe
Q 010922 359 TSPRFLPPTKID-NCRIKDAIISHGCFLR-ECTVEH-SIVGERSRLDYGVELKDTVML 413 (497)
Q Consensus 359 ~~~~~~~~~~i~-~~~i~~s~I~~~~~i~-~~~v~~-svIg~~~~i~~~~~i~~s~i~ 413 (497)
+.+.+.++++|. +|.|....|+.+|.|| +|.|.+ ++||++|.||++|.|...+.+
T Consensus 150 p~a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I 207 (316)
T 3tk8_A 150 PPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGI 207 (316)
T ss_dssp TTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEE
T ss_pred CCeEEeCCcEEcCCCEECCCEEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEE
Confidence 333344444442 3444333444444444 233322 556666666666666544433
No 123
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.77 E-value=2.5e-08 Score=93.37 Aligned_cols=36 Identities=8% Similarity=0.161 Sum_probs=25.1
Q ss_pred ceEECCCCEEc-ceEEe---eeEEcCCcEECCCCEEcceE
Q 010922 376 DAIISHGCFLR-ECTVE---HSIVGERSRLDYGVELKDTV 411 (497)
Q Consensus 376 ~s~I~~~~~i~-~~~v~---~svIg~~~~i~~~~~i~~s~ 411 (497)
++.||++|+|+ +|.+. ..+||++|.|+++|.|..+.
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~ 115 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTAS 115 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEE
T ss_pred CeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCC
Confidence 35566666665 34442 34899999999999997754
No 124
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.76 E-value=1.3e-08 Score=101.56 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=30.5
Q ss_pred eEeCCCcEeec---------eEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccc
Q 010922 435 IGVGRNTKIRN---------CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSG 481 (497)
Q Consensus 435 ~~Ig~~~~i~~---------~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g 481 (497)
+.||.++.|.. ++||+||.||.|++| ...+++.+.+++|++|..+
T Consensus 237 v~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI--GVtIGd~~iIGAGSVVtkd 290 (347)
T 3r5d_A 237 SDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI--GIPLGDRNIVEAGLYITAG 290 (347)
T ss_dssp EEECTTCEECC------CCCCEECTTCEECTTCEE--CSCBCTTCEECTTCEECTT
T ss_pred CEECCCCEEccccCCCCccceEECCCCEECCCCEE--eeEECCCCEECCCCEECCC
Confidence 78888888854 899999999999988 4444444444444444433
No 125
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.76 E-value=1.4e-08 Score=105.88 Aligned_cols=66 Identities=18% Similarity=0.318 Sum_probs=55.2
Q ss_pred eEECCCCEEc------ceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcC
Q 010922 377 AIISHGCFLR------ECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDK 450 (497)
Q Consensus 377 s~I~~~~~i~------~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~ 450 (497)
+.|.+++.|+ .+.++++.||++|.| +++.|.++++..+ |.||+++.|.+|+|++
T Consensus 303 ~~i~~~~~i~~~~~~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~-------------------~~I~~~~~i~~~~i~~ 362 (420)
T 3brk_X 303 AEITPPAKFVHDDEDRRGSAVSSVVSGDCII-SGAALNRSLLFTG-------------------VRANSYSRLENAVVLP 362 (420)
T ss_dssp CCCCCCCEEECBCSSCBCEEESCEECSSCEE-ESCEEESCEECTT-------------------CEECTTCEEEEEEECT
T ss_pred cccCCCcEEecccccCCcEecCCEECCCCEE-cCCEEeCcEEcCC-------------------CEECCCCEEcceEEcC
Confidence 4455555555 256678999999999 8999999887766 8999999999999999
Q ss_pred CCEECCCcEEcC
Q 010922 451 NVKIGKDVVIVN 462 (497)
Q Consensus 451 ~~~Ig~~~~i~~ 462 (497)
++.||+++.|.+
T Consensus 363 ~~~i~~~~~i~~ 374 (420)
T 3brk_X 363 SVKIGRHAQLSN 374 (420)
T ss_dssp TCEECTTCEEEE
T ss_pred CCEECCCCEEec
Confidence 999999999874
No 126
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.75 E-value=1e-08 Score=101.62 Aligned_cols=48 Identities=21% Similarity=0.327 Sum_probs=32.9
Q ss_pred eEeCCCcEeec---------eEEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEE
Q 010922 435 IGVGRNTKIRN---------CIIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITI 484 (497)
Q Consensus 435 ~~Ig~~~~i~~---------~iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~v 484 (497)
+.|+.++.|.. +.||+||.||+|++| ...+++.+.+++|++|..+..|
T Consensus 214 v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI--gVtIGd~~iIGAGSVVtkdt~I 270 (332)
T 3fsy_A 214 SDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL--GISLGDDCVVEAGLYVTAGTRV 270 (332)
T ss_dssp CEECTTCEECSBCC---CCBCEECTTCEECTTCEE--CSCBCSSCEECTTCEECTTCEE
T ss_pred CEECCCCEEcCCCCCCCccceEECCCCEECCCCEE--eeEECCCCEECCCCEECCCCEE
Confidence 67777777753 888889999998888 4455555555556666555443
No 127
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.72 E-value=4.2e-08 Score=93.03 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=16.4
Q ss_pred eEECCCCEEcc-eEEee----eEEcCCcEECCCC
Q 010922 377 AIISHGCFLRE-CTVEH----SIVGERSRLDYGV 405 (497)
Q Consensus 377 s~I~~~~~i~~-~~v~~----svIg~~~~i~~~~ 405 (497)
+.||++|.|+. +.+.. ++||++|.|++++
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ 92 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGE 92 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEE
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEE
Confidence 55666666663 44432 5666666666533
No 128
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.69 E-value=1.2e-07 Score=92.15 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=16.1
Q ss_pred eEECCCCEEcc-eEEe---eeEEcCCcEECCCCEEc
Q 010922 377 AIISHGCFLRE-CTVE---HSIVGERSRLDYGVELK 408 (497)
Q Consensus 377 s~I~~~~~i~~-~~v~---~svIg~~~~i~~~~~i~ 408 (497)
+.||++|.|++ +.+. +++||++|.|++++.|.
T Consensus 86 v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~ 121 (252)
T 3jqy_B 86 VRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVV 121 (252)
T ss_dssp EEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEE
T ss_pred EEECCCCEECCceEEccCCEEEECCCCEECCCcEEE
Confidence 44555555552 2331 45555555555555555
No 129
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.68 E-value=4.2e-08 Score=92.10 Aligned_cols=50 Identities=8% Similarity=0.173 Sum_probs=30.5
Q ss_pred CCccCCCeEEcCeEeeceEECCCCEEc-ceEEe---eeEEcCCcEECCCCEEcceE
Q 010922 360 SPRFLPPTKIDNCRIKDAIISHGCFLR-ECTVE---HSIVGERSRLDYGVELKDTV 411 (497)
Q Consensus 360 ~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v~---~svIg~~~~i~~~~~i~~s~ 411 (497)
.+.+.||.++.-. .++.||++|+|+ +|.+. ..+||++|.|+++|.|..+.
T Consensus 60 ~~~i~~~~~~~~g--~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~ 113 (199)
T 3ftt_A 60 NVSISIPFDTDYG--WNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTAT 113 (199)
T ss_dssp SEEECSSEEESSS--TTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEE
T ss_pred CeEEeCCEEEEec--CCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCC
Confidence 4455666666210 134555555555 34442 35999999999999996553
No 130
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.68 E-value=2.7e-08 Score=99.66 Aligned_cols=27 Identities=30% Similarity=0.554 Sum_probs=14.1
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEc
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~ 461 (497)
|.||.|++|. ++.||+||.||+|+++.
T Consensus 230 v~IGaga~Ilggv~IG~~a~IGagsvV~ 257 (313)
T 3q1x_A 230 VTIGTGAKVLGNIIVGSHVRIGANCWID 257 (313)
T ss_dssp CEECTTCEEESSCEECSSEEECTTCEEC
T ss_pred CEECCCCEECCCcEECCCCEECCCCEEC
Confidence 4555555443 45555555555555554
No 131
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.68 E-value=1.1e-07 Score=94.16 Aligned_cols=55 Identities=16% Similarity=0.323 Sum_probs=41.7
Q ss_pred eEEcCCcEECCCCEEcce--------EEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCC
Q 010922 393 SIVGERSRLDYGVELKDT--------VMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKD 464 (497)
Q Consensus 393 svIg~~~~i~~~~~i~~s--------~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~ 464 (497)
++||++|.|+++|.|... +..|++ +.||.|+.| ++.||+||.||+|++|..+.
T Consensus 208 v~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDn------------------v~IGanAtI-gVtIGd~~iIGAGSVVtkdt 268 (332)
T 3fsy_A 208 VVVGDGSDVGGGASIMGTLSGGGTHVISIGKR------------------CLLGANSGL-GISLGDDCVVEAGLYVTAGT 268 (332)
T ss_dssp CEECTTCEECTTCEECSBCC---CCBCEECTT------------------CEECTTCEE-CSCBCSSCEECTTCEECTTC
T ss_pred eEECCCCEECCCCEEcCCCCCCCccceEECCC------------------CEECCCCEE-eeEECCCCEECCCCEECCCC
Confidence 667777777777777653 444443 888888888 88999999999998888765
Q ss_pred CC
Q 010922 465 DV 466 (497)
Q Consensus 465 ~v 466 (497)
.+
T Consensus 269 ~I 270 (332)
T 3fsy_A 269 RV 270 (332)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 132
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.67 E-value=4.8e-08 Score=90.83 Aligned_cols=51 Identities=12% Similarity=0.156 Sum_probs=31.6
Q ss_pred CCCCccCCCeEEcCeEeeceEECCCCEEc-ceEEe---eeEEcCCcEECCCCEEcce
Q 010922 358 YTSPRFLPPTKIDNCRIKDAIISHGCFLR-ECTVE---HSIVGERSRLDYGVELKDT 410 (497)
Q Consensus 358 ~~~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v~---~svIg~~~~i~~~~~i~~s 410 (497)
...+.+.||+++.-. .++.||++|+|+ +|.+. ..+||++|.|+++|.|...
T Consensus 60 g~~~~I~~~~~~~~g--~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~ 114 (188)
T 3srt_A 60 GKQINVEQNIRCDYG--YNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTA 114 (188)
T ss_dssp CSCEEECSCEEESSS--TTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECE
T ss_pred CCCCEEcCCEEEEeC--CCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeC
Confidence 344556666666310 145566666666 34443 3489999999999999543
No 133
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.67 E-value=1.5e-07 Score=88.24 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=14.6
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEc
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~ 461 (497)
|.||.++.|. ++.||+||.||+++++.
T Consensus 137 v~IG~~~~I~~gv~IG~~~vIgagsvV~ 164 (199)
T 3ftt_A 137 TWFGGHVAVLPGVTIGEGSVIGAGSVVT 164 (199)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cEEcCCCEECCCCEECCCCEECCCCEEC
Confidence 4555555553 55555555555555554
No 134
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.67 E-value=8.4e-08 Score=89.26 Aligned_cols=50 Identities=14% Similarity=0.307 Sum_probs=29.9
Q ss_pred CCccCCCeEEcCeEeeceEECCCCEEc-ceEEe---eeEEcCCcEECCCCEEcceE
Q 010922 360 SPRFLPPTKIDNCRIKDAIISHGCFLR-ECTVE---HSIVGERSRLDYGVELKDTV 411 (497)
Q Consensus 360 ~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v~---~svIg~~~~i~~~~~i~~s~ 411 (497)
.+.+.||+++.-. .++.||++|+|+ +|.+. ..+||++|.|+++|.|.++.
T Consensus 64 ~~~I~~~~~~~~g--~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~ 117 (190)
T 3hjj_A 64 KAQINPDFRCDYG--YNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTAT 117 (190)
T ss_dssp CCEECSSCEESSS--TTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEE
T ss_pred CcEECCCEEEEeC--CceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCC
Confidence 4455666655200 134444444444 23332 56899999999999997654
No 135
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.65 E-value=2.3e-07 Score=86.22 Aligned_cols=27 Identities=26% Similarity=0.347 Sum_probs=14.4
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEc
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~ 461 (497)
|.||.++.|. ++.||+||.||+++++.
T Consensus 141 v~IG~~~~I~~gv~IG~~~vIgagsvV~ 168 (190)
T 3hjj_A 141 VWVGGGAIINPGVSIGDNAVIASGAVVT 168 (190)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CEECCCCEECCCCEECCCCEECCCCEEC
Confidence 4555555553 55555555555555554
No 136
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.64 E-value=6.1e-08 Score=96.71 Aligned_cols=56 Identities=21% Similarity=0.270 Sum_probs=43.4
Q ss_pred eEEcCCcEECCCCEEcce--------EEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEECCCcEEcCCC
Q 010922 393 SIVGERSRLDYGVELKDT--------VMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKIGKDVVIVNKD 464 (497)
Q Consensus 393 svIg~~~~i~~~~~i~~s--------~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~~~ 464 (497)
++||++|.|+++|.|... +..|++ |.||.|+.| ++.||+||.||+|++|..+.
T Consensus 231 v~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdn------------------v~IGAnAtI-GVtIGd~~iIGAGSVVtkdt 291 (347)
T 3r5d_A 231 VFVGKGSDLGGGCSTMGTLSGGGNIVISVGEG------------------CLIGANAGI-GIPLGDRNIVEAGLYITAGT 291 (347)
T ss_dssp CEECTTEEECTTCEECC------CCCCEECTT------------------CEECTTCEE-CSCBCTTCEECTTCEECTTC
T ss_pred EEECCCCEECCCCEEccccCCCCccceEECCC------------------CEECCCCEE-eeEECCCCEECCCCEECCCC
Confidence 778888888888888764 444443 888888888 88899999999998888776
Q ss_pred CCC
Q 010922 465 DVQ 467 (497)
Q Consensus 465 ~v~ 467 (497)
.++
T Consensus 292 ~I~ 294 (347)
T 3r5d_A 292 KVA 294 (347)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 137
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.63 E-value=4.1e-08 Score=93.58 Aligned_cols=28 Identities=18% Similarity=0.355 Sum_probs=18.0
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEE
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVEL 407 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i 407 (497)
+++|+++|+|+ .+++||++|.|+++|.|
T Consensus 54 ~~vI~~~~~Ig----~~v~IG~~~~Ig~~v~i 81 (220)
T 4hur_A 54 DQVLYHYEVIG----DKLIIGRFCSIGPGTTF 81 (220)
T ss_dssp GGEESCCTTTC----CCEEECSSCEECTTCEE
T ss_pred CeEEeCCCEEC----CCeEECCCCEECCCCEE
Confidence 35555555555 24677777777777775
No 138
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.63 E-value=2.8e-07 Score=85.62 Aligned_cols=14 Identities=29% Similarity=0.332 Sum_probs=5.6
Q ss_pred EEcCCcEECCCCEE
Q 010922 394 IVGERSRLDYGVEL 407 (497)
Q Consensus 394 vIg~~~~i~~~~~i 407 (497)
.||+++.|+++|.|
T Consensus 78 ~IG~~~~i~~~~~i 91 (188)
T 3srt_A 78 HVGENFFANYDCIF 91 (188)
T ss_dssp EECTTEEECTTEEE
T ss_pred EECCcccccCceEE
Confidence 33344444444333
No 139
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.59 E-value=2.4e-07 Score=87.75 Aligned_cols=50 Identities=14% Similarity=0.110 Sum_probs=38.1
Q ss_pred CccCCCeEEcC-eEee----ceEECCCCEEcceEE-----eeeEEcCCcEECCCCEEcce
Q 010922 361 PRFLPPTKIDN-CRIK----DAIISHGCFLRECTV-----EHSIVGERSRLDYGVELKDT 410 (497)
Q Consensus 361 ~~~~~~~~i~~-~~i~----~s~I~~~~~i~~~~v-----~~svIg~~~~i~~~~~i~~s 410 (497)
..+++.+.|.. +.+. ++.||++|.|+++++ .+++||++|.|+++|.|.++
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~ 118 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNT 118 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESC
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECC
Confidence 34556666643 5554 289999999997665 57899999999999999875
No 140
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.59 E-value=1.3e-07 Score=101.06 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=63.4
Q ss_pred ceEECCCCEEc-ceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeec--------e
Q 010922 376 DAIISHGCFLR-ECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRN--------C 446 (497)
Q Consensus 376 ~s~I~~~~~i~-~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~--------~ 446 (497)
+++|+++|.|| .+.+++|+||++|+|++.+.|.+++|..+ |.||.||.+-| +
T Consensus 352 ~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~-------------------v~IG~g~i~~n~dg~~~~~t 412 (501)
T 3st8_A 352 GTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEY-------------------SNIGASSVFVNYDGTSKRRT 412 (501)
T ss_dssp TCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSS-------------------CEECTTCEEECBCSSSBCCE
T ss_pred CcEEccccccCCeEEEccceecCCcEEeccceecCceEcCC-------------------CEECCCEEEEcccCCcccCC
Confidence 46777777777 46778888888888888888888877666 88999988854 8
Q ss_pred EEcCCCEECCCcEEcCCCCCCCCCCCCCCeEEccccEE
Q 010922 447 IIDKNVKIGKDVVIVNKDDVQEADRPELGFYIRSGITI 484 (497)
Q Consensus 447 iI~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~~v 484 (497)
+||+||+||.++.|... .+++++++|+.|.+|
T Consensus 413 ~IGd~~~iG~~~~l~~~------v~Ig~~~~i~ags~v 444 (501)
T 3st8_A 413 TVGSHVRTGSDTMFVAP------VTIGDGAYTGAGTVV 444 (501)
T ss_dssp EECTTCEECTTCEEESS------EEECTTCEECTTCEE
T ss_pred EECCCcEECCCCEEcCC------cEECCCCEECCCCEE
Confidence 89999999998888754 344556666666443
No 141
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.59 E-value=1.6e-07 Score=92.79 Aligned_cols=29 Identities=24% Similarity=0.370 Sum_probs=23.6
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEcCC
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIVNK 463 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~ 463 (497)
|.||.|++|. ++.||+||+||+|+++..+
T Consensus 223 v~IGaga~Il~gv~IG~~a~IGagsvV~kd 252 (287)
T 3mc4_A 223 VLIGAGAKILGNIQVGQCSKIAAGSVVLKS 252 (287)
T ss_dssp CEECTTCEEESSCEECTTCEECTTCEECSC
T ss_pred CEECCCCEECCCcEECCCCEECCCCEEccc
Confidence 7888888885 6888888888888888753
No 142
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.59 E-value=5.5e-08 Score=102.23 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=76.6
Q ss_pred ceEECCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCC----
Q 010922 376 DAIISHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKN---- 451 (497)
Q Consensus 376 ~s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~---- 451 (497)
++.|++++.|.++.|.+++||++|.|+. +.|.++++..+ +.||+++.|.++++..+
T Consensus 314 ~~~i~~~~~i~~~~I~~~~Ig~~~~I~~-~~i~~~~Ig~~-------------------~~Ig~~~~I~~~~~~~~~~~~ 373 (451)
T 1yp2_A 314 QPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLR-------------------SCISEGAIIEDSLLMGADYYE 373 (451)
T ss_dssp CCCCCCCEEEEEEEEEEEEECTTCEEEE-EEEESCEECTT-------------------CEECTTCEEESCEECCCSSCC
T ss_pred CCccCCCeEEcceEEeCeEECCCCEEcc-eEEeccEECCC-------------------CEECCCCEEcCceEECCCCcc
Confidence 4667788888767788899999999986 88998887666 89999999998877777
Q ss_pred ---------------CEECCCcEEcCCCCCCCCCCCCCCeEEcccc-----EEEccCcEECCCc
Q 010922 452 ---------------VKIGKDVVIVNKDDVQEADRPELGFYIRSGI-----TIIMEKATIEDGM 495 (497)
Q Consensus 452 ---------------~~Ig~~~~i~~~~~v~~~~~~~~~~~i~~g~-----~vi~~~~~i~~g~ 495 (497)
+.||+++.|.+ ..+++.+.+++++.|..+. .+||+++.|++|+
T Consensus 374 ~~~~~~~~~~~g~~~~~Ig~~~~i~~-~~Ig~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~ 436 (451)
T 1yp2_A 374 TDADRKLLAAKGSVPIGIGKNCHIKR-AIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSGI 436 (451)
T ss_dssp CHHHHHHHHTTTCCCSEECTTCEEES-EEECTTCEECTTCEECCSSCCSCEEEGGGTEEEETTE
T ss_pred cccccccccccCceeEEECCCCEEec-cEeCCCcEECCCCEEeCCcccccCceeCCCEEEcCCE
Confidence 99999998875 4577778888888885431 2456666555554
No 143
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.56 E-value=6e-07 Score=84.50 Aligned_cols=50 Identities=16% Similarity=0.230 Sum_probs=33.5
Q ss_pred CCCccCCCeEEcCeEeeceEECCCCEEc-ceEEee---eEEcCCcEECCCCEEcce
Q 010922 359 TSPRFLPPTKIDNCRIKDAIISHGCFLR-ECTVEH---SIVGERSRLDYGVELKDT 410 (497)
Q Consensus 359 ~~~~~~~~~~i~~~~i~~s~I~~~~~i~-~~~v~~---svIg~~~~i~~~~~i~~s 410 (497)
..+.+.||..+.-. .++.||++|+|+ +|.+.+ .+||++|.|+++|.|..+
T Consensus 60 ~~~~I~~~~~~~~g--~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 113 (203)
T 1krr_A 60 ENAWVEPPVYFSYG--SNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVT 113 (203)
T ss_dssp SSCEECSCEEESCS--TTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESE
T ss_pred CCcEEcCCeEEEeC--CCeEECCeeEECCccEEecccceEECCCCEECCCCEEecC
Confidence 34556666554210 256777777777 455543 799999999999999754
No 144
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.53 E-value=2.1e-07 Score=92.99 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=20.9
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEcC
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIVN 462 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~ 462 (497)
|.||.|++|. ++.||+||+||+|+++..
T Consensus 258 V~IGaga~Il~gv~IGd~a~IGagsvV~~ 286 (310)
T 3f1x_A 258 VIVYSNATILGRVTIGKGATVGGNIWVTE 286 (310)
T ss_dssp CEECTTCEEESSCEECTTCEECSSCEECS
T ss_pred cEEcCCCEECCCcEECCCCEECCCCEECC
Confidence 7777777775 777777777777777764
No 145
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.53 E-value=3.8e-07 Score=89.35 Aligned_cols=27 Identities=7% Similarity=-0.007 Sum_probs=24.4
Q ss_pred CCcEE--EEcCCeeeccCHHHHHHHHHHc
Q 010922 184 IENVA--ILCGDHLYRMDYMDFIQSHVDR 210 (497)
Q Consensus 184 ~e~~L--Vl~gD~l~~~dl~~ll~~h~~~ 210 (497)
.|++| ++++|++...+|.+++.+|...
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~ 47 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLAN 47 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhc
Confidence 38999 9999999999999999999874
No 146
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.51 E-value=6.6e-07 Score=82.97 Aligned_cols=35 Identities=11% Similarity=0.306 Sum_probs=24.9
Q ss_pred ceEECCCCEEc-ceEE---eeeEEcCCcEECCCCEEcce
Q 010922 376 DAIISHGCFLR-ECTV---EHSIVGERSRLDYGVELKDT 410 (497)
Q Consensus 376 ~s~I~~~~~i~-~~~v---~~svIg~~~~i~~~~~i~~s 410 (497)
++.||++|+|. +|.+ .+.+||++|.|+++|.|.++
T Consensus 74 ~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 112 (185)
T 2p2o_A 74 NIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTA 112 (185)
T ss_dssp TEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECE
T ss_pred CEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcC
Confidence 35566666665 3444 46799999999999999653
No 147
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.49 E-value=3.4e-07 Score=87.16 Aligned_cols=36 Identities=3% Similarity=0.180 Sum_probs=17.5
Q ss_pred ceEECCCCEEc--------ceEE-eeeEEcCCcEECCCCEEcceE
Q 010922 376 DAIISHGCFLR--------ECTV-EHSIVGERSRLDYGVELKDTV 411 (497)
Q Consensus 376 ~s~I~~~~~i~--------~~~v-~~svIg~~~~i~~~~~i~~s~ 411 (497)
++.||++|+|+ ++.+ .+++||++++||++|.|...+
T Consensus 35 ~v~IG~~t~i~~~~~~~~~~~vI~~~~~Ig~~v~IG~~~~Ig~~v 79 (220)
T 4hur_A 35 NILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGT 79 (220)
T ss_dssp TEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTC
T ss_pred CEEECCCeEECCcCCcccCCeEEeCCCEECCCeEECCCCEECCCC
Confidence 46666666662 1111 234444455555555555443
No 148
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.47 E-value=4.2e-07 Score=85.55 Aligned_cols=27 Identities=22% Similarity=0.414 Sum_probs=14.5
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEc
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~ 461 (497)
|.||.++.|. ++.||+||.||+++++.
T Consensus 138 v~IG~~a~I~~gv~IG~~~vIgagsvV~ 165 (203)
T 1krr_A 138 VWIGSHVVINPGVTIGDNSVIGAGSIVT 165 (203)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEEeCCeEECCCCEECCCCEEC
Confidence 5555555553 45555555555555554
No 149
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.46 E-value=2.3e-07 Score=91.58 Aligned_cols=78 Identities=23% Similarity=0.287 Sum_probs=39.9
Q ss_pred eEECCCCEEcceEEeeeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEee-ceEEcCCCEEC
Q 010922 377 AIISHGCFLRECTVEHSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR-NCIIDKNVKIG 455 (497)
Q Consensus 377 s~I~~~~~i~~~~v~~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~iI~~~~~Ig 455 (497)
+.||++|+|+.. ..++||++|+||++|.|...+.+++.. ...++-++.||+||.|. +|.|..+++||
T Consensus 171 a~IG~~v~I~hg--~gvvIG~~~~IGd~v~I~~gvtIg~~~----------~~~~~r~~~IGd~v~IGaga~Il~gv~IG 238 (287)
T 3mc4_A 171 ARLGSGLFLDHA--TGLVVGETAVVEDNVSILHGVTLGGTG----------KSSGDRHPKIRQGVLIGAGAKILGNIQVG 238 (287)
T ss_dssp CEECSSCEEESC--TTCEECTTCEECSSCEEETTCEEEC---------------CCCSCEECTTCEECTTCEEESSCEEC
T ss_pred CEECCCeEEccC--CCeEECCCeEECCCCEEcCCCEEcCCc----------ccCCCcCCEECCCCEECCCCEECCCcEEC
Confidence 445555555411 135566666666666665544444310 01122235666666664 66666666666
Q ss_pred CCcEEcCCCCC
Q 010922 456 KDVVIVNKDDV 466 (497)
Q Consensus 456 ~~~~i~~~~~v 466 (497)
++++|.....|
T Consensus 239 ~~a~IGagsvV 249 (287)
T 3mc4_A 239 QCSKIAAGSVV 249 (287)
T ss_dssp TTCEECTTCEE
T ss_pred CCCEECCCCEE
Confidence 66666554433
No 150
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.45 E-value=9.1e-07 Score=81.81 Aligned_cols=35 Identities=17% Similarity=0.414 Sum_probs=23.9
Q ss_pred ceEECCCCEEc-ceEE---eeeEEcCCcEECCCCEEcce
Q 010922 376 DAIISHGCFLR-ECTV---EHSIVGERSRLDYGVELKDT 410 (497)
Q Consensus 376 ~s~I~~~~~i~-~~~v---~~svIg~~~~i~~~~~i~~s 410 (497)
++.||++|+|+ ++.+ ...+||++|.|+++|.|...
T Consensus 72 ~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 110 (182)
T 1ocx_A 72 NIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTA 110 (182)
T ss_dssp TEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECE
T ss_pred CEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeC
Confidence 34555555555 3444 25799999999999999643
No 151
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.43 E-value=8.8e-07 Score=87.56 Aligned_cols=28 Identities=7% Similarity=0.000 Sum_probs=24.9
Q ss_pred CCcEE--EEcCCeeeccCHHHHHHHHHHcC
Q 010922 184 IENVA--ILCGDHLYRMDYMDFIQSHVDRD 211 (497)
Q Consensus 184 ~e~~L--Vl~gD~l~~~dl~~ll~~h~~~~ 211 (497)
.|++| ++++|++...+|.+++..|...+
T Consensus 39 ~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 39 CEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 48999 99999999999999999998743
No 152
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.43 E-value=3.4e-07 Score=91.42 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=8.2
Q ss_pred eEEcCCCEECCCcEEc
Q 010922 446 CIIDKNVKIGKDVVIV 461 (497)
Q Consensus 446 ~iI~~~~~Ig~~~~i~ 461 (497)
++||+||.||+|++|.
T Consensus 252 ~~IGd~V~IGaga~Il 267 (310)
T 3f1x_A 252 PILEDDVIVYSNATIL 267 (310)
T ss_dssp CEECTTCEECTTCEEE
T ss_pred CEECCCcEEcCCCEEC
Confidence 3555555555555544
No 153
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.42 E-value=4.4e-07 Score=83.94 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=12.2
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEc
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~ 461 (497)
+.||.++.|. ++.||+||.||+++++.
T Consensus 135 v~Ig~~a~I~~gv~IG~~~vIgagsvV~ 162 (182)
T 1ocx_A 135 VWIGGRAVINPGVTIGDNVVVASGAVVT 162 (182)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCcEECCCCEECCCCEEC
Confidence 4444444442 44444444444444443
No 154
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.41 E-value=2.4e-07 Score=92.70 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=14.9
Q ss_pred ceEEcCCCEECCCcEEcCCC
Q 010922 445 NCIIDKNVKIGKDVVIVNKD 464 (497)
Q Consensus 445 ~~iI~~~~~Ig~~~~i~~~~ 464 (497)
.++||+||.||+|++|....
T Consensus 223 ~~~IGd~v~IGaga~Ilggv 242 (313)
T 3q1x_A 223 HPTVGDYVTIGTGAKVLGNI 242 (313)
T ss_dssp SCEECSSCEECTTCEEESSC
T ss_pred CCEECCCCEECCCCEECCCc
Confidence 45888888888888876543
No 155
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.40 E-value=4.2e-07 Score=89.86 Aligned_cols=62 Identities=23% Similarity=0.348 Sum_probs=35.9
Q ss_pred eeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEee-ceEEcCCCEECCCcEEcCC
Q 010922 392 HSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVNK 463 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~ 463 (497)
+++||++|.|+.+|+|.++-.... .-...|+++ |.||.|++|. ++.||++|+||+|+++..+
T Consensus 183 ~~~IG~~v~I~~gvtLg~~~~~~~-------~~~~~IGd~---v~IGaga~Ilggv~IG~~a~IGagsvV~~d 245 (289)
T 1t3d_A 183 TAVIENDVSILQSVTLGGTGKSGG-------DRHPKIREG---VMIGAGAKILGNIEVGRGAKIGAGSVVLQP 245 (289)
T ss_dssp TCEECSSCEECTTCEEECCSSSCS-------SCSCEECTT---CEECTTCEEESSCEECTTCEECTTCEECSC
T ss_pred CcEECCCCEEcCCcEECCCccccC-------CCCeEECCC---eEECCCCEEecCcEECCCCEECCCCEEccC
Confidence 456666666666666654300000 001122223 7788887774 6888888888888887653
No 156
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.40 E-value=7.8e-07 Score=82.45 Aligned_cols=27 Identities=22% Similarity=0.362 Sum_probs=14.3
Q ss_pred eEeCCCcEee-ceEEcCCCEECCCcEEc
Q 010922 435 IGVGRNTKIR-NCIIDKNVKIGKDVVIV 461 (497)
Q Consensus 435 ~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~ 461 (497)
|.||.|+.|. ++.||+||.||+++++.
T Consensus 137 v~IG~~~~I~~gv~IG~~~vIgagsvV~ 164 (185)
T 2p2o_A 137 VWIGGRAVINPGVTIGDNAVIASGAVVT 164 (185)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred eEECCCCEECCCCEECCCCEECCCCEEC
Confidence 4555555553 55555555555555554
No 157
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.36 E-value=1.7e-05 Score=83.79 Aligned_cols=352 Identities=13% Similarity=0.120 Sum_probs=186.2
Q ss_pred ccCCCceEEEEecCCCCCcccCCCCCCCCcccccc-CcccchhHhHHHHHhc----CCc-EEEEEcccC-hhHHHHHHHh
Q 010922 59 KVKPGVAYAVMTSKHPNEVMTLAPPRAATPAVPVA-GCYRLIDIPMSNCINS----GIN-KIFVLTQFN-SASLNRHIAR 131 (497)
Q Consensus 59 ~~~~~~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~-g~p~LId~~L~~l~~~----GI~-~I~Iv~~~~-~~~l~~~l~~ 131 (497)
+...+.+.+|+||+|.||||. ...||.++||. |+ ++++..++++... |.. ..+|.|.+. .+...+++.+
T Consensus 122 ~~~l~kvavvlLaGGlGTRLG---~~~PK~~i~V~sgk-tflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k 197 (528)
T 3r3i_A 122 SSVLNKLVVVKLNGGLGTSMG---CKGPKSLIGVRNEN-TFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQK 197 (528)
T ss_dssp CTTCTTEEEEEECCCBCTTTT---CSSBGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGG
T ss_pred hhhcCceEEEEeCCCCccccC---CCCCccceecCCCC-cHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHh
Confidence 345667899999999999984 57899999997 77 6999999998764 532 445666654 5667666643
Q ss_pred c-ccCCCcc-cCCCeE-EEeeCccCCCC--------CCCcc-ccChHHHHHHHH--HHhhhhccCCCCcEEEEcCCeee-
Q 010922 132 T-YFGNGTN-FGDGFV-EVLAATQTPGE--------SGKNW-FQGTADAVRQFT--WVFEDAKNRNIENVAILCGDHLY- 196 (497)
Q Consensus 132 ~-y~~~g~~-~~~~~V-eIl~~~~~~~e--------~~~~~-~~GTa~aL~~~~--~~i~~~~~~~~e~~LVl~gD~l~- 196 (497)
. ||+.... |....+ .+......+-+ ....| +-|.++...... -.+++....+.+.+.+.+.|.+.
T Consensus 198 ~~~fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga 277 (528)
T 3r3i_A 198 YNHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGA 277 (528)
T ss_dssp GTTSSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTC
T ss_pred cCccCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCccc
Confidence 2 2332110 000000 00000000000 01122 246655443322 23444445678999999999975
Q ss_pred ccCHHHHHHHHHHc----CCCeEEEEeeeCCCCCCcceEEEECCCCC--EEEEeecCCccccccccccccccCCCccccc
Q 010922 197 RMDYMDFIQSHVDR----DADITISCAAVGESRASDYGLVKIDNMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQEAR 270 (497)
Q Consensus 197 ~~dl~~ll~~h~~~----~a~~tl~~~~~~~~~~~~~g~v~~d~~g~--V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~ 270 (497)
..|. .++..+.++ ++++.+-+.+...+ ...-|++.. .+|+ ++++.|-|+...... + + .
T Consensus 278 ~vDp-~~Lg~~~~~~~~~~~d~~~kVv~Kt~~-dek~Gvl~~-~dGk~~vvEyseip~e~~~~~----~---g------~ 341 (528)
T 3r3i_A 278 TVDL-YILNHLMNPPNGKRCEFVMEVTNKTRA-DVKGGTLTQ-YEGKLRLVEIAQVPKAHVDEF----K---S------V 341 (528)
T ss_dssp CCCH-HHHHHHSSCSSSCCCSEEEEECCCCTT-CCSSCEEEC-SSSSCEEECTTSSCGGGTTTS----S---C------S
T ss_pred ccCH-HHHHHHHhcccccCCcEEEEEeEcccc-CCcccEEEE-ECCeEEEEEecCCChhHhhcc----C---C------c
Confidence 4454 356777776 78877766554321 123455543 3444 444444443321100 0 0 0
Q ss_pred cCCccceeeEEEEcHHHHHHHHhhhCCCC--------Cc----------hhhhhHHhhhccCceEEEEec-cEEEecCCH
Q 010922 271 KCPYVASMGVYVFKKDVLFKLLRWRYPTS--------ND----------FGSEIIPAAIMEHDVQAYIFR-DYWEDIGTI 331 (497)
Q Consensus 271 ~~~~l~~~Giyif~~~vL~~ll~~~~~~~--------~d----------~~~~ii~~li~~~~v~~~~~~-g~w~dIgt~ 331 (497)
......++....|+-+.|.+++++..... .+ +..+.++.+ .+..++.+. ..+..+-+.
T Consensus 342 ~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f---~~~~~i~VpR~rF~PvKn~ 418 (528)
T 3r3i_A 342 SKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSF---ENSLGINVPRSRFLPVKTT 418 (528)
T ss_dssp SSCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTS---SSCCCEECCGGGCCBCCSH
T ss_pred ccCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhc---cCcEEEEEehHHcccccch
Confidence 12345799999999999998887632110 00 111111111 223344432 237788888
Q ss_pred HHHHHHHHHhhcCCCCccc-cCCCCCCCCCCccCCCeEEcC--eEeec--eEECCCCEEcceEEeeeEEcCCcEECCCCE
Q 010922 332 KSFYEANMALTKESPAFHF-YDPKTPFYTSPRFLPPTKIDN--CRIKD--AIISHGCFLRECTVEHSIVGERSRLDYGVE 406 (497)
Q Consensus 332 ~~y~~An~~l~~~~~~~~~-~~~~~~i~~~~~~~~~~~i~~--~~i~~--s~I~~~~~i~~~~v~~svIg~~~~i~~~~~ 406 (497)
.|++-..-++..-.. -.+ ..|.....+ .|-++++. .+|.+ ..+..--.|.++ .+=+|--++..|.+++
T Consensus 419 sdLll~~Sdly~l~~-g~l~~~~~r~~~~----~P~v~L~~~~~~v~~f~~rf~~iP~l~~~--~~LtV~Gdv~fg~~v~ 491 (528)
T 3r3i_A 419 SDLLLVMSNLYSLNA-GSLTMSEKREFPT----VPLVKLGSSFTKVQDYLRRFESIPDMLEL--DHLTVSGDVTFGKNVS 491 (528)
T ss_dssp HHHHHHHSTTSEEET-TEEECCSSCSSCC----CCEEEECTTSCSHHHHHHHCSSCCEEEEE--EEEEEESEEECCTTCE
T ss_pred HHHHHHhcceeEeeC-CeEEecccccCCC----CCEEEeCcccCcHHHHHHhCCCCCCcccC--CEEEEecceEECCCcE
Confidence 888755544332111 111 112111111 12223321 12211 222222223333 4557777889999999
Q ss_pred EcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEEcCCCEE
Q 010922 407 LKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCIIDKNVKI 454 (497)
Q Consensus 407 i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI~~~~~I 454 (497)
+++++++.++ ...++.|.+|+.++|++|--|.+|
T Consensus 492 l~G~v~i~~~--------------~g~~~~ip~g~~len~~v~g~~~~ 525 (528)
T 3r3i_A 492 LKGTVIIIAN--------------HGDRIDIPPGAVLENKIVSGNLRI 525 (528)
T ss_dssp EEEEEEEECC--------------TTCEEECCTTCEEEEEEEC-----
T ss_pred EEEEEEEEcC--------------CCCceecCCCCEEeccEEeccccc
Confidence 9999988442 224589999999999998877666
No 158
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.33 E-value=1e-06 Score=86.20 Aligned_cols=62 Identities=27% Similarity=0.365 Sum_probs=37.4
Q ss_pred eeEEcCCcEECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEee-ceEEcCCCEECCCcEEcCC
Q 010922 392 HSIVGERSRLDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIR-NCIIDKNVKIGKDVVIVNK 463 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~iI~~~~~Ig~~~~i~~~ 463 (497)
+++||++|.|+++|+|.++..... .-...++++ |.||.|++|. ++.||++|+||+|+++..+
T Consensus 163 ~~~IG~~v~I~~gvtig~~~~~~~-------~~~~~IGd~---v~IGaga~Il~gv~IG~~a~IGagsvV~~d 225 (267)
T 1ssq_A 163 TSVIENDVSILQGVTLGGTGKESG-------DRHPKVREG---VMIGAGAKILGNIEVGKYAKIGANSVVLNP 225 (267)
T ss_dssp TCEECTTCEECTTCEEECCSSSCS-------SCSCEECTT---CEECTTCEEESSCEECTTCEECTTCEECSC
T ss_pred eeEECCCCEEcCCcEECCCcccCC-------CCCeEECCC---eEEcCCCEEeCCcEECCCCEECCCCEEccC
Confidence 456666777777766665410000 001122223 7888888874 7888888888888888753
No 159
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.15 E-value=2.9e-06 Score=80.12 Aligned_cols=17 Identities=12% Similarity=0.368 Sum_probs=12.9
Q ss_pred eeeEEcCCcEECCCCEE
Q 010922 391 EHSIVGERSRLDYGVEL 407 (497)
Q Consensus 391 ~~svIg~~~~i~~~~~i 407 (497)
.+++||++|.|+++|+|
T Consensus 57 ~~v~IG~~~~I~~~v~i 73 (212)
T 3eev_A 57 DKLVIGSFCSIGSGAVF 73 (212)
T ss_dssp CCEEECSSCEECTTCEE
T ss_pred CCcEECCCCEECCCCEE
Confidence 35678888888888876
No 160
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.12 E-value=7.7e-06 Score=77.23 Aligned_cols=17 Identities=0% Similarity=-0.148 Sum_probs=11.0
Q ss_pred EcCCcEECCCCEEcceE
Q 010922 395 VGERSRLDYGVELKDTV 411 (497)
Q Consensus 395 Ig~~~~i~~~~~i~~s~ 411 (497)
++.+++||++|.|...+
T Consensus 55 i~~~v~IG~~~~I~~~v 71 (212)
T 3eev_A 55 DVDKLVIGSFCSIGSGA 71 (212)
T ss_dssp SSCCEEECSSCEECTTC
T ss_pred ccCCcEECCCCEECCCC
Confidence 55666777777776554
No 161
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.12 E-value=3.1e-06 Score=86.54 Aligned_cols=27 Identities=11% Similarity=0.241 Sum_probs=12.8
Q ss_pred eEeCCCcEeeceEEcCCCEECCCcEEcC
Q 010922 435 IGVGRNTKIRNCIIDKNVKIGKDVVIVN 462 (497)
Q Consensus 435 ~~Ig~~~~i~~~iI~~~~~Ig~~~~i~~ 462 (497)
|.||.|+. .++.||++|.||+|++|..
T Consensus 297 v~IGagAv-~GV~IGdgavIGAGsVVt~ 323 (387)
T 2rij_A 297 CLLGANSV-TGIPLGDNCIVDAGIAVLE 323 (387)
T ss_dssp CEECTTCE-ECSCBCTTCEECTTCEECT
T ss_pred CEECCCCc-CCcEECCCCEECCCCEECC
Confidence 34444444 4445555555555554443
No 162
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.11 E-value=0.00039 Score=72.90 Aligned_cols=343 Identities=13% Similarity=0.126 Sum_probs=189.3
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCccccc-cCcccchhHhHHHHHh----cCCc-EEEEEcccC-hhHHHHHHHhc-ccC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPV-AGCYRLIDIPMSNCIN----SGIN-KIFVLTQFN-SASLNRHIART-YFG 135 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI-~g~p~LId~~L~~l~~----~GI~-~I~Iv~~~~-~~~l~~~l~~~-y~~ 135 (497)
.+..|+||+|.||||. ...||.++|| .|+ ++++..++++.. .|.. -.+|.|.+. ++...+++.+. ||+
T Consensus 76 kvavvlLaGGlGTRLG---~~~pKg~~~v~sgk-sflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~Fg 151 (484)
T 3gue_A 76 QAVVLKLNGGLGTGMG---LNGPKSLLQVKNGQ-TFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTLY 151 (484)
T ss_dssp TEEEEEEECCCCGGGT---CSSCGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHHH
T ss_pred hcEEEEEcCCcccccC---CCCCceeeecCCCC-cHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCcccC
Confidence 5788999999999984 5689999999 566 799999998765 2433 457777765 57788888643 354
Q ss_pred CCc----ccCCCeEEEe-eCccCC--CC--CCCcc-ccChHHHHHHHH--HHhhhhccCCCCcEEEEcCCeeeccCHHHH
Q 010922 136 NGT----NFGDGFVEVL-AATQTP--GE--SGKNW-FQGTADAVRQFT--WVFEDAKNRNIENVAILCGDHLYRMDYMDF 203 (497)
Q Consensus 136 ~g~----~~~~~~VeIl-~~~~~~--~e--~~~~~-~~GTa~aL~~~~--~~i~~~~~~~~e~~LVl~gD~l~~~dl~~l 203 (497)
... -|....+-.+ .....+ .+ ....| +.|.++...... -.+++....+.+.+.+.+.|.+...-=-.+
T Consensus 152 l~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~~ 231 (484)
T 3gue_A 152 EVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRL 231 (484)
T ss_dssp TTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHHH
T ss_pred CCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHHH
Confidence 211 1111111111 111100 00 01122 256666554432 234444456789999999999765433467
Q ss_pred HHHHHHcCCCeEEEEeeeCCCCCCcceEEEEC---------CCCC--EEEEeecCCccccccccccccccCCCccccccC
Q 010922 204 IQSHVDRDADITISCAAVGESRASDYGLVKID---------NMGR--IAQFAEKPSGANLKAMQVDTSLLGFSPQEARKC 272 (497)
Q Consensus 204 l~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d---------~~g~--V~~~~EKp~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (497)
+..+.++++++.+-+.+...+. ..-|++... .+|+ ++++.|-|...... .. + . ..
T Consensus 232 lG~~~~~~~d~~~kvv~Kt~~d-ekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~-f~--------~---~-~g 297 (484)
T 3gue_A 232 LDYMHEKQLGFLMEVCRRTESD-KKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDS-FQ--------N---I-AK 297 (484)
T ss_dssp HHHHHHTTCSEEEEEEECCTTC-CSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHH-HT--------C---T-TT
T ss_pred HHHHHhcCCCEEEEEEECCCCC-CceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhh-hc--------C---C-CC
Confidence 8889999999988887755421 235644332 2454 44555544432110 00 0 0 01
Q ss_pred CccceeeEEEEcHHHHHHHHhhhC-----CC-----C--------------CchhhhhHHhhhccCceEEEEec-cEEEe
Q 010922 273 PYVASMGVYVFKKDVLFKLLRWRY-----PT-----S--------------NDFGSEIIPAAIMEHDVQAYIFR-DYWED 327 (497)
Q Consensus 273 ~~l~~~Giyif~~~vL~~ll~~~~-----~~-----~--------------~d~~~~ii~~li~~~~v~~~~~~-g~w~d 327 (497)
....+++-..++-..+.++++... |. . +.|..++++.+ .+..++.+. .-+..
T Consensus 298 ~~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~---~~~~~ieV~R~rF~P 374 (484)
T 3gue_A 298 HCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLF---DRSEAVVVPRERFAP 374 (484)
T ss_dssp SCEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTS---SSEEEEECCGGGCCC
T ss_pred ceEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhC---CccEEEEEChhhccc
Confidence 234488888999888877877631 10 0 01222222222 245555543 34667
Q ss_pred cCCHHHHHHHHHHhhcCCCCccc-cCCCCCCCCCCccCCCeEEcC---eEeec--eEECCCC-EEcceEEeeeEEcCCcE
Q 010922 328 IGTIKSFYEANMALTKESPAFHF-YDPKTPFYTSPRFLPPTKIDN---CRIKD--AIISHGC-FLRECTVEHSIVGERSR 400 (497)
Q Consensus 328 Igt~~~y~~An~~l~~~~~~~~~-~~~~~~i~~~~~~~~~~~i~~---~~i~~--s~I~~~~-~i~~~~v~~svIg~~~~ 400 (497)
+-+..|++-...++..-.....+ ..+.. .. ..|-++++. .+|.+ ..+.+|. .|.++ .+=+|--++.
T Consensus 375 vKn~sdLl~~~Sdly~l~~~~~l~~~~~~-~~----~~P~v~L~~~~~~~v~~f~~rf~~giPsl~~~--~~L~V~Gdv~ 447 (484)
T 3gue_A 375 VKTCSDLLALRSDAYQVTEDQRLVLCEER-NG----KPPAIDLDGEHYKMIDGFEKLVKGGVPSLRQC--TSLTVRGLVE 447 (484)
T ss_dssp CSSHHHHHHHHSTTEEECTTSCEEECGGG-TT----CCCEEEECTTTSSSHHHHHHHHTTCCCBCTTE--EEEEEESSEE
T ss_pred cccchHHHHHhhhceeccCCceEEecccc-CC----CCCeEEECchhcCcHHHHHHhcCCCCCChhhC--CEEEEecceE
Confidence 77777776665444432111111 11111 00 112233421 22221 3333333 23333 4557777888
Q ss_pred ECCCCEEcceEEeCCccccchhHHHHhhcCCCcceEeCCCcEeeceEE
Q 010922 401 LDYGVELKDTVMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRNCII 448 (497)
Q Consensus 401 i~~~~~i~~s~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~iI 448 (497)
.|.++++++++++.++ ...++.|.+|+.++|++|
T Consensus 448 fg~~v~l~G~v~i~~~--------------~g~~~~ip~g~~l~~~~~ 481 (484)
T 3gue_A 448 FGADVSVRGNVVIKNL--------------KEEPLIIGSGRVLDNEVV 481 (484)
T ss_dssp ECTTCEEEEEEEEEEC--------------SSSCEEECTTCEEESCEE
T ss_pred ECCCcEEEEEEEEEcC--------------CCCeeecCCCCEecceec
Confidence 9999999999988542 124588999999988876
No 163
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.11 E-value=3.3e-06 Score=80.39 Aligned_cols=17 Identities=18% Similarity=0.305 Sum_probs=12.6
Q ss_pred eeEEcCCcEECCCCEEc
Q 010922 392 HSIVGERSRLDYGVELK 408 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i~ 408 (497)
..+||++|.|+++|.|.
T Consensus 65 ~v~IG~~~~I~~gv~I~ 81 (219)
T 4e8l_A 65 KLIIGRFCSIGPGTTFI 81 (219)
T ss_dssp CEEECSSCEECTTCEEE
T ss_pred CEEECCCCEEcCCCEEE
Confidence 46778888888887773
No 164
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.11 E-value=3.3e-06 Score=78.78 Aligned_cols=53 Identities=25% Similarity=0.468 Sum_probs=34.9
Q ss_pred eeEEcCCcEECCCCEEcce--EEeCCccccchhHHHHhhcCCCcceEeCCCcEeec-------------------eEEcC
Q 010922 392 HSIVGERSRLDYGVELKDT--VMLGADYYQTESEIASLLAEGKVPIGVGRNTKIRN-------------------CIIDK 450 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i~~s--~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~-------------------~iI~~ 450 (497)
++.||++|.|+++|.|.++ +.+|++ |.||+++.|.. ++||+
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~------------------~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 137 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDH------------------VLIGPSTQFYTASHSLDYRRRQAWETICKPIVIED 137 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTT------------------CEECTTCEEECEECCSSGGGTTTCCCEECCEEECT
T ss_pred CeEECCCcEECcCCEEecCceEEECCC------------------CEECCCCEEecCCCCcccccccccceecCCeEECC
Confidence 5678888888888888433 444544 77888887643 46666
Q ss_pred CCEECCCcEEcC
Q 010922 451 NVKIGKDVVIVN 462 (497)
Q Consensus 451 ~~~Ig~~~~i~~ 462 (497)
||.||.+++|..
T Consensus 138 ~v~IG~~~~I~~ 149 (195)
T 3nz2_A 138 DVWIGGNVVINQ 149 (195)
T ss_dssp TCEECTTCEECT
T ss_pred CCEEcCCCEECC
Confidence 666666666653
No 165
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.06 E-value=3.4e-06 Score=79.69 Aligned_cols=16 Identities=19% Similarity=0.345 Sum_probs=13.1
Q ss_pred eeEEcCCcEECCCCEE
Q 010922 392 HSIVGERSRLDYGVEL 407 (497)
Q Consensus 392 ~svIg~~~~i~~~~~i 407 (497)
.++||++|.|+++|.|
T Consensus 60 ~v~IG~~~~Ig~gv~I 75 (209)
T 1mr7_A 60 KLKIGKFCSIGPGVTI 75 (209)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CEEECCCCEEcCCCEE
Confidence 4788888888888877
No 166
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.94 E-value=1.4e-05 Score=75.51 Aligned_cols=17 Identities=12% Similarity=0.405 Sum_probs=14.3
Q ss_pred eeeEEcCCcEECCCCEE
Q 010922 391 EHSIVGERSRLDYGVEL 407 (497)
Q Consensus 391 ~~svIg~~~~i~~~~~i 407 (497)
...+||++|.|+++|+|
T Consensus 55 ~~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAF 71 (212)
T ss_dssp CCEEECSSCEECTTCEE
T ss_pred cCEEEcCCCEECCCCEE
Confidence 46789999999999887
No 167
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=97.84 E-value=4.6e-05 Score=72.39 Aligned_cols=38 Identities=5% Similarity=0.204 Sum_probs=23.7
Q ss_pred ceEECCCCEEcc---eEEee------eEEcCCcEECCCCEEcceEEe
Q 010922 376 DAIISHGCFLRE---CTVEH------SIVGERSRLDYGVELKDTVML 413 (497)
Q Consensus 376 ~s~I~~~~~i~~---~~v~~------svIg~~~~i~~~~~i~~s~i~ 413 (497)
+..||++++|++ +.+.+ ++|+.+++||++|.|...+.+
T Consensus 34 ~i~IG~~t~i~~~~~~~~~~~vi~~~~~i~~~v~IG~~~~I~~gv~I 80 (219)
T 4e8l_A 34 NILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTF 80 (219)
T ss_dssp SEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEE
T ss_pred CEEECCccEEcCCcCceecceEEeecceeCCCEEECCCCEEcCCCEE
Confidence 466777777763 12222 345677888888888766554
No 168
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.48 E-value=0.00052 Score=64.74 Aligned_cols=15 Identities=0% Similarity=-0.031 Sum_probs=8.1
Q ss_pred CCcEECCCCEEcceE
Q 010922 397 ERSRLDYGVELKDTV 411 (497)
Q Consensus 397 ~~~~i~~~~~i~~s~ 411 (497)
..++||++|.|...+
T Consensus 55 ~~i~IG~~~~Ig~~v 69 (212)
T 1xat_A 55 DKLVIGSFCSIGSGA 69 (212)
T ss_dssp CCEEECSSCEECTTC
T ss_pred cCEEEcCCCEECCCC
Confidence 455566666665443
No 169
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=97.22 E-value=0.00017 Score=67.99 Aligned_cols=37 Identities=8% Similarity=0.168 Sum_probs=23.6
Q ss_pred ceEECCCCEEcc---eEEeeeE------EcCCcEECCCCEEcceEE
Q 010922 376 DAIISHGCFLRE---CTVEHSI------VGERSRLDYGVELKDTVM 412 (497)
Q Consensus 376 ~s~I~~~~~i~~---~~v~~sv------Ig~~~~i~~~~~i~~s~i 412 (497)
+..||++|+|++ +.+.+++ |+..+.||++|.|...+.
T Consensus 29 ~i~IG~~~~I~~~~~~~i~~~~i~~~~~i~~~v~IG~~~~Ig~gv~ 74 (209)
T 1mr7_A 29 NVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVT 74 (209)
T ss_dssp TEEECTTCEEECSSSCCGGGGEESCCGGGCCCEEECSSCEECTTCE
T ss_pred CeEECCCcEEcCCCceEEeceEEeeccccCCCEEECCCCEEcCCCE
Confidence 467788888874 2333344 455678888888876653
No 170
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=95.97 E-value=0.081 Score=57.02 Aligned_cols=165 Identities=10% Similarity=0.071 Sum_probs=102.1
Q ss_pred ceEEEEecCCCCCcccCCCCCCCCcccccc---CcccchhHhHHHHHh-cCCc-EEEEEcccC-hhHHHHHHHhcccCCC
Q 010922 64 VAYAVMTSKHPNEVMTLAPPRAATPAVPVA---GCYRLIDIPMSNCIN-SGIN-KIFVLTQFN-SASLNRHIARTYFGNG 137 (497)
Q Consensus 64 ~m~aVIlaaG~G~Rl~Plt~~~PK~LlPI~---g~p~LId~~L~~l~~-~GI~-~I~Iv~~~~-~~~l~~~l~~~y~~~g 137 (497)
.+..|+||+|.||||. ...||.++|++ |+ +++++.++++.+ .|.. ..+|.|.+. ++...+++.+ | +..
T Consensus 114 kvavvllaGGlGTRLG---~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-f-gl~ 187 (630)
T 3ogz_A 114 KTVFVLVAGGLGERLG---YSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-L-QLE 187 (630)
T ss_dssp GEEEEEECCCEEGGGT---EEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-T-TCC
T ss_pred hceEEEecCCcccccC---CCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-h-CCC
Confidence 6789999999999975 46899999997 88 699999999876 3533 456666654 6778888865 3 321
Q ss_pred cccCCCeEEE-----eeCcc-C----CCC--CCCcc-ccChHHHHHHHHH--------------------HhhhhccCCC
Q 010922 138 TNFGDGFVEV-----LAATQ-T----PGE--SGKNW-FQGTADAVRQFTW--------------------VFEDAKNRNI 184 (497)
Q Consensus 138 ~~~~~~~VeI-----l~~~~-~----~~e--~~~~~-~~GTa~aL~~~~~--------------------~i~~~~~~~~ 184 (497)
.. .|.+ +++-. . ..+ ....| +.|.++....... .+++....+.
T Consensus 188 ~~----~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gi 263 (630)
T 3ogz_A 188 VP----NLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGY 263 (630)
T ss_dssp CT----TEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTC
T ss_pred cc----cEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCC
Confidence 11 1221 11100 0 000 01112 3566665544332 4555555678
Q ss_pred CcEEEEcCCeee-ccCHHHHHHHHHHcCCCeEEEEeeeCCCCCCcceEEEE--CCCCCE
Q 010922 185 ENVAILCGDHLY-RMDYMDFIQSHVDRDADITISCAAVGESRASDYGLVKI--DNMGRI 240 (497)
Q Consensus 185 e~~LVl~gD~l~-~~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~--d~~g~V 240 (497)
+.+.+.+.|.+. ..---.++-.+.++++++.+-+.+... ...-|.+.. ..+|+.
T Consensus 264 eyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p--~E~vG~l~~~~~~dGk~ 320 (630)
T 3ogz_A 264 ESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVP--KEPIGLLCRTKKNSGDP 320 (630)
T ss_dssp CEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCS--SCSSCEEEEEESSTTSC
T ss_pred EEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEECCC--CcceeeEEEEecCCCce
Confidence 999999999943 333334678889999998887766432 223454443 345655
No 171
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=95.89 E-value=0.019 Score=53.37 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=68.7
Q ss_pred CceEEEEec--CCCCCcccCCCCCCCCccccccCcccchhHhHHHHHhcCCcEE-EEEcccChhHHHHHHHhcccCCCcc
Q 010922 63 GVAYAVMTS--KHPNEVMTLAPPRAATPAVPVAGCYRLIDIPMSNCINSGINKI-FVLTQFNSASLNRHIARTYFGNGTN 139 (497)
Q Consensus 63 ~~m~aVIla--aG~G~Rl~Plt~~~PK~LlPI~g~p~LId~~L~~l~~~GI~~I-~Iv~~~~~~~l~~~l~~~y~~~g~~ 139 (497)
+.|.+||++ +...|||.| ...+..-...++ |||+|+++.+..++++++ ++++++... +.+
T Consensus 2 ~~~~~vip~k~g~~KtRL~~---~l~~~~~~~l~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~~-------~~~------ 64 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSP---VLSLQEREEFVE-LMLNQVISSLKGAGIEQVDILSPSVYGL-------EEM------ 64 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTT---TSCHHHHHHHHH-HHHHHHHHHHHHTTCSEEEEEESSCTTC-------SSC------
T ss_pred CceEEEEEeCCCCCccccCc---cCCHHHHHHHHH-HHHHHHHHHHHHcCCceEEEEEcCcHHH-------Hhh------
Confidence 468899999 555677542 122222226678 599999999999999999 899876421 111
Q ss_pred cCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCee--eccCHHHHHH
Q 010922 140 FGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHL--YRMDYMDFIQ 205 (497)
Q Consensus 140 ~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l--~~~dl~~ll~ 205 (497)
++ ++++... .|.+.+++.+...+ .+.++++.||+= ....+..+++
T Consensus 65 ~~---~~~v~~~-----------~gl~~sl~~a~~~~-------~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 65 TE---ARVLLDE-----------KDLNEALNRYLKEA-------EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp CS---SEEEECC-----------SCHHHHHHHHHHHC-------CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred cC---CEEEECC-----------CCHHHHHHHHHHhc-------CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 22 3444321 38899998886544 268999999983 3444555554
No 172
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=78.27 E-value=11 Score=34.16 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=63.2
Q ss_pred cccccCcccchhHhHHHHHhcCCc--EEEEEcccChhHHHHHHHhcccCCCcccCCCeEEEeeCccCCCCCCCccccChH
Q 010922 89 AVPVAGCYRLIDIPMSNCINSGIN--KIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGTA 166 (497)
Q Consensus 89 LlPI~g~p~LId~~L~~l~~~GI~--~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~VeIl~~~~~~~e~~~~~~~GTa 166 (497)
.+|.-|.+..|...|+.+.+.-.. +|+||-....+...+.+ +.+... +. .+.++.. .. .|.+
T Consensus 10 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~-~~~~~~---~~--~i~~i~~-~n---------~G~~ 73 (240)
T 3bcv_A 10 IVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKIC-DDYAAQ---YP--NIKVIHK-KN---------AGLG 73 (240)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHH-HHHHHH---CS--SEEEEEC-CC---------CCHH
T ss_pred EEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHH-HHHHhh---CC--CEEEEEC-CC---------CChH
Confidence 455556656888888888765433 66666543332222222 222111 11 2566642 11 5888
Q ss_pred HHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-HHHHHHHHHHcCCCeEE
Q 010922 167 DAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDADITI 216 (497)
Q Consensus 167 ~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-l~~ll~~h~~~~a~~tl 216 (497)
.+.-.+..... .+.++++.+|.+...+ +..+++...+.+.++.+
T Consensus 74 ~a~N~g~~~a~------g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 74 MACNSGLDVAT------GEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp HHHHHHHHHCC------SSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcC------CCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 88877765553 4789999999988776 56666666665666544
No 173
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=72.55 E-value=48 Score=30.13 Aligned_cols=100 Identities=12% Similarity=0.188 Sum_probs=62.1
Q ss_pred cccccCcccchhHhHHHHHhcCCc--EEEEEcccChhHHHHHHHhcccCCCcccCCCeEEEeeCc--------cCCCCCC
Q 010922 89 AVPVAGCYRLIDIPMSNCINSGIN--KIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAAT--------QTPGESG 158 (497)
Q Consensus 89 LlPI~g~p~LId~~L~~l~~~GI~--~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~VeIl~~~--------~~~~e~~ 158 (497)
.+|.-|....|...|+.+.+.-.. +|+||-....+...+.+ +.+.. . ..+.++... ..
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~-~~~~~-~-----~~i~~i~~~~~~~~~~~~n----- 73 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVI-RPFLN-D-----NRVRFYQSDISGVKERTEK----- 73 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHH-GGGGG-S-----TTEEEEECCCCSHHHHHSS-----
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHH-HHHhh-c-----CCEEEEecccccccccccc-----
Confidence 456666667888999988775443 56666554444444444 34421 1 126666543 11
Q ss_pred CccccChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-HHHHHHHHHHc
Q 010922 159 KNWFQGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDR 210 (497)
Q Consensus 159 ~~~~~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-l~~ll~~h~~~ 210 (497)
.|.+.+.-.+..... .+.++++.+|.+...+ +..+++.+.+.
T Consensus 74 ----~G~~~a~N~gi~~a~------g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 74 ----TRYAALINQAIEMAE------GEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp ----CHHHHHHHHHHHHCC------CSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred ----cCHHHHHHHHHHHcC------CCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 477777777665443 4789999999998776 46666666554
No 174
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=56.53 E-value=89 Score=31.68 Aligned_cols=103 Identities=13% Similarity=0.066 Sum_probs=61.2
Q ss_pred ccccCcc-cchhHhHHHHHhcCC----cEEEEEcccChh-HHHHHHHhcccCCCcccCCCeEEEeeCccCCCCCCCcccc
Q 010922 90 VPVAGCY-RLIDIPMSNCINSGI----NKIFVLTQFNSA-SLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQ 163 (497)
Q Consensus 90 lPI~g~p-~LId~~L~~l~~~GI----~~I~Iv~~~~~~-~l~~~l~~~y~~~g~~~~~~~VeIl~~~~~~~e~~~~~~~ 163 (497)
+|.-|.. ..|...|+.+.+.-. .+|+||-....+ ...+.+. .+... ++ ..|+++..... .
T Consensus 35 Ip~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~-~~~~~---~~-~~v~vi~~~~n---------~ 100 (472)
T 1xhb_A 35 IVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLE-SYVKK---LK-VPVHVIRMEQR---------S 100 (472)
T ss_dssp EEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHH-HHHHS---SS-SCEEEEECSSC---------C
T ss_pred EEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHH-HHHHH---CC-CcEEEEECCCC---------C
Confidence 4555664 577788888776432 277777654432 2333332 22111 11 02666654332 4
Q ss_pred ChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-HHHHHHHHHHcCC
Q 010922 164 GTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDA 212 (497)
Q Consensus 164 GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-l~~ll~~h~~~~a 212 (497)
|-+.|.-.+..... .+.++++.+|.....+ +..+++...+...
T Consensus 101 G~~~a~N~g~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~ 144 (472)
T 1xhb_A 101 GLIRARLKGAAVSR------GQVITFLDAHCECTAGWLEPLLARIKHDRR 144 (472)
T ss_dssp CHHHHHHHHHHHCC------SSEEEEEESSEEECTTCHHHHHHHHHHCTT
T ss_pred ChHHHHHHHHHhcc------CCeEEEECCCeEeCccHHHHHHHHHHhCCC
Confidence 88888877765543 4789999999988665 6777777665544
No 175
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=52.13 E-value=77 Score=29.51 Aligned_cols=90 Identities=7% Similarity=-0.019 Sum_probs=56.9
Q ss_pred cchhHhHHHHHhcCCcEEEEEcccChhHHHHHHHhcccCCCcccCCCeEEEeeCccCCCCCCCccccChHHHHHHHHHHh
Q 010922 97 RLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGTADAVRQFTWVF 176 (497)
Q Consensus 97 ~LId~~L~~l~~~GI~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~VeIl~~~~~~~e~~~~~~~GTa~aL~~~~~~i 176 (497)
+|+.++++.+..++...++++++.....+.+ .+.+.+. + +.+.+ |. ..|-+.+++.+...+
T Consensus 38 ~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~--~~~~~~~----~---~~~~~--q~--------~~gLg~rl~~a~~~~ 98 (242)
T 3cgx_A 38 HFVQDMLQGLARLHADLHICYVPGDADLPEK--FKAWLGP----Q---HMFAA--QQ--------GLDLGERMKHAMQKA 98 (242)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCCCTTHHHH--HHHHHCT----T---SEEEE--CC--------SSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCchhhhhh--hhhhccC----C---cEEec--CC--------CCCHHHHHHHHHHHH
Confidence 4999999999999988887887765543310 0111111 1 12222 21 148899999887654
Q ss_pred hhhccCCCCcEEEEcCCe--eeccCHHHHHHHHH
Q 010922 177 EDAKNRNIENVAILCGDH--LYRMDYMDFIQSHV 208 (497)
Q Consensus 177 ~~~~~~~~e~~LVl~gD~--l~~~dl~~ll~~h~ 208 (497)
-. ...+.++++.+|+ +...++.++++.+.
T Consensus 99 ~~---~~~~~vliigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 99 FD---DGYDRVVLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp HH---TTCSEEEEECSSCTTCCHHHHHHHHHHTT
T ss_pred Hh---CCCCeEEEEcCCCCCCCHHHHHHHHHHhc
Confidence 21 2346899999998 55667788777554
No 176
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=40.61 E-value=92 Score=32.78 Aligned_cols=102 Identities=12% Similarity=0.157 Sum_probs=61.4
Q ss_pred cccccCcc-cchhHhHHHHHhcCC-c---EEEEEcccChh-HHHHHHHhcccCCCcccCCCeEEEeeCccCCCCCCCccc
Q 010922 89 AVPVAGCY-RLIDIPMSNCINSGI-N---KIFVLTQFNSA-SLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWF 162 (497)
Q Consensus 89 LlPI~g~p-~LId~~L~~l~~~GI-~---~I~Iv~~~~~~-~l~~~l~~~y~~~g~~~~~~~VeIl~~~~~~~e~~~~~~ 162 (497)
.+|.-|.. ..|...|+.+.+.-. . +|+||-....+ .+.+.+ +.|... +. .|.++.....
T Consensus 117 IIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l-~~~~~~---~~--~v~vi~~~~n--------- 181 (570)
T 2d7i_A 117 IIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPL-EDYMAL---FP--SVRILRTKKR--------- 181 (570)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHH-HHHHTT---ST--TEEEEECSSC---------
T ss_pred EEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHH-HHHHHh---CC--eEEEEECCCC---------
Confidence 35666774 577788888766432 2 77777654332 223333 222111 11 2677654322
Q ss_pred cChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-HHHHHHHHHHcC
Q 010922 163 QGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRD 211 (497)
Q Consensus 163 ~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-l~~ll~~h~~~~ 211 (497)
.|-+.|.-.+..... .+.++++.+|.....+ +..+++...+..
T Consensus 182 ~G~~~A~N~G~~~A~------gd~i~fLD~D~~~~p~~L~~ll~~l~~~~ 225 (570)
T 2d7i_A 182 EGLIRTRMLGASVAT------GDVITFLDSHCEANVNWLPPLLDRIARNR 225 (570)
T ss_dssp CCHHHHHHHHHHHCC------SSEEEECCSSEEECTTCSHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHhcC------CCEEEEEcCCccccccHHHHHHHHHHhCC
Confidence 488888877765543 4789999999988664 677777766543
No 177
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=35.81 E-value=2.6e+02 Score=28.41 Aligned_cols=100 Identities=7% Similarity=0.069 Sum_probs=61.1
Q ss_pred cccccCccc-chhHhHHHHHhcCC-c---EEEEEcccCh-hHHHHHHHhcccCCCcccCCCeEEEeeCccCCCCCCCccc
Q 010922 89 AVPVAGCYR-LIDIPMSNCINSGI-N---KIFVLTQFNS-ASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWF 162 (497)
Q Consensus 89 LlPI~g~p~-LId~~L~~l~~~GI-~---~I~Iv~~~~~-~~l~~~l~~~y~~~g~~~~~~~VeIl~~~~~~~e~~~~~~ 162 (497)
.+|.-|... .|...|+.+.+.-. . +|+||-.... ..+...+ +. +. .|.++.....
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~-~~-------~~--~v~vi~~~~n--------- 131 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL-GK-------IE--KVRVLRNDRR--------- 131 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG-GG-------BT--TEEEEECSSC---------
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH-hc-------CC--CEEEEECCCC---------
Confidence 456667644 67788888765422 2 7777755443 3333322 11 11 2666654322
Q ss_pred cChHHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-HHHHHHHHHHcCCC
Q 010922 163 QGTADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDAD 213 (497)
Q Consensus 163 ~GTa~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-l~~ll~~h~~~~a~ 213 (497)
.|-+.|+..+..... .+.++++.+|.....+ +..+++...+....
T Consensus 132 ~G~~~A~N~G~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 132 EGLMRSRVRGADAAQ------AKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp CHHHHHHHHHHHHCC------SSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred cCHHHHHHHHHHhcC------CCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 478888877765543 4788999999988654 77888777665543
No 178
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=31.03 E-value=2.3e+02 Score=29.77 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=59.7
Q ss_pred cccccCcccchhHhHHHHHhcCCc--EEEEEcccChhHHHHHHHhcccCCCcccCCCeEEEeeCccCCCCCCCccccChH
Q 010922 89 AVPVAGCYRLIDIPMSNCINSGIN--KIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGTA 166 (497)
Q Consensus 89 LlPI~g~p~LId~~L~~l~~~GI~--~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~VeIl~~~~~~~e~~~~~~~GTa 166 (497)
++|.-|....|...|+.+.+.-.. +|+|+-....+...+.+. .+... + ..+.++.. .. .|-+
T Consensus 380 ii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~-~~~~~---~--~~i~~~~~-~n---------~G~~ 443 (625)
T 2z86_A 380 YIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQ-EHYAN---H--PRVRFISQ-KN---------KGIG 443 (625)
T ss_dssp EEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHH-HHHTT---C--TTEEEEEE-CC---------CCHH
T ss_pred EEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHH-HHHhh---C--CcEEEEeC-CC---------CCHH
Confidence 355567667889999988764332 666665543333333332 22111 1 12566642 11 4888
Q ss_pred HHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-HHHHHHHHHHc
Q 010922 167 DAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDR 210 (497)
Q Consensus 167 ~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-l~~ll~~h~~~ 210 (497)
.++-.+..... .+.++++.+|.+...+ +..+++...+.
T Consensus 444 ~a~n~g~~~a~------g~~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 444 SASNTAVRLCR------GFYIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp HHHHHHHHHCC------SSEEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred HHHHHHHHhcC------CCEEEEECCCcccChhHHHHHHHHHHhC
Confidence 88877765543 4789999999988776 45666655443
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=26.35 E-value=4.5e+02 Score=27.35 Aligned_cols=103 Identities=12% Similarity=0.096 Sum_probs=62.6
Q ss_pred cccccCcccchhHhHHHHHhcC---CcEEEEEcccChhHHHHHHHhcccCCCcccCCCeEEEeeCccCCCCCCCccccCh
Q 010922 89 AVPVAGCYRLIDIPMSNCINSG---INKIFVLTQFNSASLNRHIARTYFGNGTNFGDGFVEVLAATQTPGESGKNWFQGT 165 (497)
Q Consensus 89 LlPI~g~p~LId~~L~~l~~~G---I~~I~Iv~~~~~~~l~~~l~~~y~~~g~~~~~~~VeIl~~~~~~~e~~~~~~~GT 165 (497)
++|.-|.+..|...|+.+.+.- --+|+||-....+...+.+ +.+ .. .. .+.++..... + .|-
T Consensus 98 iIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~-~~~-~~--~~---~i~~i~~~~~----~----~g~ 162 (625)
T 2z86_A 98 VIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIV-REF-ES--LL---NIKYVRQKDY----G----YQL 162 (625)
T ss_dssp EEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHH-HTT-TT--TS---CEEEEEECCC----S----CCH
T ss_pred EEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHH-HHh-hh--cC---CeEEEEeCCC----C----cch
Confidence 4677777678888998887652 3477777665544444444 333 11 11 2555542211 0 257
Q ss_pred HHHHHHHHHHhhhhccCCCCcEEEEcCCeeeccC-HHHHHHHHHHcCC
Q 010922 166 ADAVRQFTWVFEDAKNRNIENVAILCGDHLYRMD-YMDFIQSHVDRDA 212 (497)
Q Consensus 166 a~aL~~~~~~i~~~~~~~~e~~LVl~gD~l~~~d-l~~ll~~h~~~~a 212 (497)
+.++-.+..... .+.++++.+|.+...+ +..+++.+.+...
T Consensus 163 ~~a~N~g~~~a~------g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~ 204 (625)
T 2z86_A 163 CAVRNLGLRAAK------YNYVAILDCDMAPNPLWVQSYMELLAVDDN 204 (625)
T ss_dssp HHHHHHHHHHCC------SSEEEEECTTEEECTTHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHhCC------cCEEEEECCCCCCCHHHHHHHHHHHhcCCc
Confidence 777777665443 4789999999999776 4566666655444
Done!