BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010932
(497 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 30/286 (10%)
Query: 46 FKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPH-Q 104
K F L +L+ A++ FS++ I+ G VY+GRL + LVA+KR + Q
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGG---FGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--DKQPLPWEMR 162
F TE + H+ L+ L G C ERLLV YM N +++ L + PL W R
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 163 VRVAYYIAQAL----DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-----MKNSRD 213
R+A A+ L DHC+ + ++ D+ A +L DE+ + + FGL K+
Sbjct: 142 QRIALGSARGLAYLHDHCDP--KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 199
Query: 214 GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI---------PPSHALDV 264
+ + + PE+L TG+ ++ ++ YG +LL+L++G+ LD
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 265 IRG----KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
++G K L L+D L+G Y +E+ QL+++A C Q +RP
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 305
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 30/286 (10%)
Query: 46 FKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQ-SWPDPHQ 104
K F L +L+ A++ F ++ I+ G VY+GRL + LVA+KR + + Q
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGG---FGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--DKQPLPWEMR 162
F TE + H+ L+ L G C ERLLV YM N +++ L + PL W R
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 163 VRVAYYIAQAL----DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-----MKNSRD 213
R+A A+ L DHC+ + ++ D+ A +L DE+ + + FGL K+
Sbjct: 134 QRIALGSARGLAYLHDHCDP--KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV 191
Query: 214 GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI---------PPSHALDV 264
+ + + PE+L TG+ ++ ++ YG +LL+L++G+ LD
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 265 IRG----KNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
++G K L L+D L+G Y +E+ QL+++A C Q +RP
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 46 FKEFVLADLRAATNGFSSELIV---SESGDKAPNVVYRGRLKNNRLVAIKRFSR----QS 98
F F +L+ TN F I ++ G+ VVY+G + NN VA+K+ + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 99 WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ-PL 157
QF E + +H+ LV L+G ++GD+ LV YMPN +L L D PL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 158 PWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD---- 213
W MR ++A A ++ + +N ++ D+ + +L DE ++S FGL + S
Sbjct: 131 SWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL 271
AY PE LR G + P+S IYS+G VLL++++G +P A+D R LL
Sbjct: 190 VMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLL 243
Query: 272 LLMDSS-----------LEGQYANEDATQ---LVELASKCLQYEAKDRPDVK 309
L + ++ + + D+T + +AS+CL + RPD+K
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 46 FKEFVLADLRAATNGFSSELIV---SESGDKAPNVVYRGRLKNNRLVAIKRFSR----QS 98
F F +L+ TN F I ++ G+ VVY+G + NN VA+K+ + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 99 WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ-PL 157
QF E + +H+ LV L+G ++GD+ LV YMPN +L L D PL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 158 PWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD---- 213
W MR ++A A ++ + +N ++ D+ + +L DE ++S FGL + S
Sbjct: 131 SWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL 271
AY PE LR G + P+S IYS+G VLL++++G +P A+D R LL
Sbjct: 190 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLL 243
Query: 272 LLMDSS-----------LEGQYANEDATQ---LVELASKCLQYEAKDRPDVK 309
L + ++ + + D+T + +AS+CL + RPD+K
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 46 FKEFVLADLRAATNGFSSELIV---SESGDKAPNVVYRGRLKNNRLVAIKRFSRQ----S 98
F F +L+ TN F I ++ G+ VVY+G + NN VA+K+ + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 64
Query: 99 WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ-PL 157
QF E + +H+ LV L+G ++GD+ LV YMPN +L L D PL
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 158 PWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD---- 213
W MR ++A A ++ + +N ++ D+ + +L DE ++S FGL + S
Sbjct: 125 SWHMRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL 271
AY PE LR G + P+S IYS+G VLL++++G +P A+D R LL
Sbjct: 184 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLL 237
Query: 272 LLMDSS-----------LEGQYANEDATQ---LVELASKCLQYEAKDRPDVK 309
L + ++ + + D+T + +AS+CL + RPD+K
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 289
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 25/278 (8%)
Query: 51 LADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAA 110
L DL ATN F + ++ G VY+G L++ VA+KR + +S +F TE
Sbjct: 31 LVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 111 GLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWD--KQPLPWEMRVRVAYY 168
L RH LV+LIG C E +E +L+ +YM N L +HL+ D + WE R+ +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 169 IAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRD-GKSY-----STNL 221
A+ L + ++ R + H D+ + +L DE+ P+++ FG+ K + G+++ L
Sbjct: 148 AARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK-----HIP------PSHALDVIRGKNL 270
Y PE+ GR+ +S +YS+G VL ++L + +P A++ L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDV 308
++D +L + E + + A KCL ++DRP +
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 25/278 (8%)
Query: 51 LADLRAATNGFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAA 110
L DL ATN F + ++ G VY+G L++ VA+KR + +S +F TE
Sbjct: 31 LVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 111 GLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWD--KQPLPWEMRVRVAYY 168
L RH LV+LIG C E +E +L+ +YM N L +HL+ D + WE R+ +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 169 IAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRD------GKSYSTNL 221
A+ L + ++ R + H D+ + +L DE+ P+++ FG+ K + L
Sbjct: 148 AARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK-----HIP------PSHALDVIRGKNL 270
Y PE+ GR+ +S +YS+G VL ++L + +P A++ L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 271 LLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDV 308
++D +L + E + + A KCL ++DRP +
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 46 FKEFVLADLRAATNGFSSELIV---SESGDKAPNVVYRGRLKNNRLVAIKRFSR----QS 98
F F +L+ TN F I ++ G+ VVY+G + NN VA+K+ + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 61
Query: 99 WPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ-PL 157
QF E +H+ LV L+G ++GD+ LV Y PN +L L D PL
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 158 PWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD---- 213
W R ++A A ++ + +N ++ D+ + +L DE ++S FGL + S
Sbjct: 122 SWHXRCKIAQGAANGINFLH-ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 214 --GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLL 271
AY PE LR G + P+S IYS+G VLL++++G +P A+D R LL
Sbjct: 181 VXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLL 234
Query: 272 LLMDSS-----------LEGQYANEDATQL---VELASKCLQYEAKDRPDVK 309
L + ++ + + D+T + +AS+CL + RPD+K
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIK 286
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
+ E G VV G+ + VAIK S + +F+ EA + N+ H++LV L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYG 71
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN-------- 177
C + ++ +YM N L +L EMR R + Q L+ C
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLR---------EMRHR--FQTQQLLEMCKDVCEAMEY 120
Query: 178 -SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPPEFLRT 231
+ L+ DL A L ++ G ++S FGL + D + S+ + ++PPE L
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMY 180
Query: 232 GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291
+ +S I+++G ++ ++ S +P + +++ L + + ++
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA----QGLRLYRPHLASEKVY 236
Query: 292 ELASKCLQYEAKDRPDVKFLLSAV 315
+ C +A +RP K LLS +
Sbjct: 237 TIMYSCWHEKADERPTFKILLSNI 260
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
+ E G VV G+ + VAIK S + +F+ EA + N+ H++LV L G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 86
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN-------- 177
C + ++ +YM N L +L EMR R + Q L+ C
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLR---------EMRHR--FQTQQLLEMCKDVCEAMEY 135
Query: 178 -SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST-----NLAYTPPEFLRT 231
+ L+ DL A L ++ G ++S FGL + D + S+ + ++PPE L
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMY 195
Query: 232 GRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLV 291
+ +S I+++G ++ ++ S +P + +++ L + + ++
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA----QGLRLYRPHLASEKVY 251
Query: 292 ELASKCLQYEAKDRPDVKFLLSAV 315
+ C +A +RP K LLS +
Sbjct: 252 TIMYSCWHEKADERPTFKILLSNI 275
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
+ E G VV G+ + VAIK S + +F+ EA + N+ H++LV L G
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYG 70
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN-------- 177
C + ++ +YM N L +L EMR R + Q L+ C
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLR---------EMRHR--FQTQQLLEMCKDVCEAMEY 119
Query: 178 -SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLR 230
+ L+ DL A L ++ G ++S FGL + D + Y++++ ++PPE L
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM 178
Query: 231 TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
+ +S I+++G ++ ++ S +P + +++ L + + ++
Sbjct: 179 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA----QGLRLYRPHLASEKV 234
Query: 291 VELASKCLQYEAKDRPDVKFLLSAV 315
+ C +A +RP K LLS +
Sbjct: 235 YTIMYSCWHEKADERPTFKILLSNI 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
+ E G VV G+ + VAIK S + +F+ EA + N+ H++LV L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYG 71
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN-------- 177
C + ++ +YM N L +L EMR R + Q L+ C
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLR---------EMRHR--FQTQQLLEMCKDVCEAMEY 120
Query: 178 -SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLR 230
+ L+ DL A L ++ G ++S FGL + D + Y++++ ++PPE L
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM 179
Query: 231 TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
+ +S I+++G ++ ++ S +P + +++ L + + ++
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA----QGLRLYRPHLASEKV 235
Query: 291 VELASKCLQYEAKDRPDVKFLLSAV 315
+ C +A +RP K LLS +
Sbjct: 236 YTIMYSCWHEKADERPTFKILLSNI 260
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
+ E G VV G+ + VAIK S + +F+ EA + N+ H++LV L G
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYG 77
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN-------- 177
C + ++ +YM N L +L EMR R + Q L+ C
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLR---------EMRHR--FQTQQLLEMCKDVCEAMEY 126
Query: 178 -SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLR 230
+ L+ DL A L ++ G ++S FGL + D + Y++++ ++PPE L
Sbjct: 127 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM 185
Query: 231 TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
+ +S I+++G ++ ++ S +P + +++ L + + ++
Sbjct: 186 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA----QGLRLYRPHLASEKV 241
Query: 291 VELASKCLQYEAKDRPDVKFLLSAV 315
+ C +A +RP K LLS +
Sbjct: 242 YTIMYSCWHEKADERPTFKILLSNI 266
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
+ E G VV G+ + VAIK S + +F+ EA + N+ H++LV L G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 86
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN-------- 177
C + ++ +YM N L +L EMR R + Q L+ C
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLR---------EMRHR--FQTQQLLEMCKDVCEAMEY 135
Query: 178 -SQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLR 230
+ L+ DL A L ++ G ++S FGL + D + Y++++ ++PPE L
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM 194
Query: 231 TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQL 290
+ +S I+++G ++ ++ S +P + +++ L + + ++
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA----QGLRLYRPHLASEKV 250
Query: 291 VELASKCLQYEAKDRPDVKFLLSAV 315
+ C +A +RP K LLS +
Sbjct: 251 YTIMYSCWHEKADERPTFKILLSNI 275
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
+ E G VV G+ + VAIK S + +F+ EA + N+ H++LV L G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYG 66
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
C + ++ +YM N L +L + + + + + +A+++ S+ + L+
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK-QFLHR 124
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA------YTPPEFLRTGRVIPESV 239
DL A L ++ G ++S FGL + D + Y++++ ++PPE L + +S
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 240 IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQ 299
I+++G ++ ++ S +P + +++ L + + ++ + C
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIA----QGLRLYRPHLASEKVYTIMYSCWH 239
Query: 300 YEAKDRPDVKFLLSAV 315
+A +RP K LLS +
Sbjct: 240 EKADERPTFKILLSNI 255
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 94 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 152
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 153 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 212 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 268 HQAFETMFQESSISDEVEKELGK 290
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 120/266 (45%), Gaps = 12/266 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 152
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 153 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 212 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
Query: 312 LSAVAPLQKQTEVASHVLMGLSKAPV 337
A + +++ ++ V L K V
Sbjct: 268 HQAFETMFQESSISDEVEKELGKQGV 293
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 147
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 148 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 207 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 263 HQAFETMFQESSISDEVEKELGK 285
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 149
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 150 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 209 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 265 HQAFETMFQESSISDEVEKELGK 287
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 42 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 101
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 102 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 160
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 161 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 219
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 220 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 276 HQAFETMFQESSISDEVEKELGK 298
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 147
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 148 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 207 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 263 HQAFETMFQESSISDEVEKELGK 285
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 130/279 (46%), Gaps = 35/279 (12%)
Query: 62 SSELIVSES-GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFV---TEAAGLGNVRH 117
+SE+++S G + VY+G+ + V I + P P QF E A L RH
Sbjct: 35 ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVD---PTPEQFQAFRNEVAVLRKTRH 91
Query: 118 KRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN 177
++ +G + D +V Q+ +L KHL H + + +A AQ +D+ +
Sbjct: 92 VNILLFMGYMTK-DNLAIVTQWCEGSSLYKHL-HVQETKFQMFQLIDIARQTAQGMDYLH 149
Query: 178 SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL------MKNSRDGKSYSTNLAYTPPEFLRT 231
++N ++ D+ + + E ++ FGL S+ + + ++ + PE +R
Sbjct: 150 AKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 232 GRVIP---ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT 288
P +S +YSYG VL +L++G+ +P SH I ++ ++ M + YA+ D +
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGE-LPYSH----INNRDQIIFM---VGRGYASPDLS 260
Query: 289 QLVE--------LASKCLQYEAKDRPDVKFLLSAVAPLQ 319
+L + L + C++ ++RP +LS++ LQ
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 149
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 150 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 209 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 265 HQAFETMFQESSISDEVEKELGK 287
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 147
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 148 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 207 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
Query: 312 LSAVAPLQKQTEVASHV 328
A + +++ ++ V
Sbjct: 263 HQAFETMFQESSISDEV 279
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 147
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 148 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 207 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
Query: 312 LSAVAPLQKQTEVASHV 328
A + +++ ++ V
Sbjct: 263 HQAFETMFQESSISDEV 279
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 30 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 89
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 90 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 148
Query: 198 GDPRLSSFGLMKNSRDGKSYST------NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + +T PE L + +S ++++G +L ++
Sbjct: 149 HLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 208 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 264 HQAFETMFQESSISDEVEKELGK 286
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 91 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 149
Query: 198 GDPRLSSFGLMKNSRDGKSYST------NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + +T PE L + +S ++++G +L ++
Sbjct: 150 HLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 209 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 265 HQAFETMFQESSISDEVEKELGK 287
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-LV 136
V G + N+ VA+K + F+ EA+ + +RH LV L+G E L +V
Sbjct: 37 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+YM +L +L + L + ++ + + +A+++ N ++ DL A VL E
Sbjct: 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSE 152
Query: 197 DGDPRLSSFGLMKNSRDGKSYST-NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH 255
D ++S FGL K + + + +T PE LR + +S ++S+G +L ++ S
Sbjct: 153 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 212
Query: 256 IP 257
+P
Sbjct: 213 VP 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 6/182 (3%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-LV 136
V G + N+ VA+K + F+ EA+ + +RH LV L+G E L +V
Sbjct: 22 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+YM +L +L + L + ++ + + +A+++ N ++ DL A VL E
Sbjct: 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSE 137
Query: 197 DGDPRLSSFGLMKNSRDGK-SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH 255
D ++S FGL K + + + + +T PE LR + +S ++S+G +L ++ S
Sbjct: 138 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
Query: 256 IP 257
+P
Sbjct: 198 VP 199
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 86
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 87 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 145
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +++ + + +T PE L + +S ++++G +L ++
Sbjct: 146 HLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 204
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D + L++ + ++ EL C Q+ DRP +
Sbjct: 205 T-YGMSPYPGID---PSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 261 HQAFETMFQESSISDEVEKELGK 283
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C +V
Sbjct: 48 VYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVT 107
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YMP L +L +++ + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 108 EYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 166
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L +S ++++G +L ++
Sbjct: 167 HVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA 225
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ + P +D+ + +LL + + ++ EL C ++ DRP
Sbjct: 226 T-YGMSPYPGIDLSQVYDLL---EKGYRMEQPEGCPPKVYELMRACWKWSPADRP 276
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-LV 136
V G + N+ VA+K + F+ EA+ + +RH LV L+G E L +V
Sbjct: 28 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 84
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+YM +L +L + L + ++ + + +A+++ N ++ DL A VL E
Sbjct: 85 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSE 143
Query: 197 DGDPRLSSFGLMKNSRDGKSYST-NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH 255
D ++S FGL K + + + +T PE LR +S ++S+G +L ++ S
Sbjct: 144 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGR 203
Query: 256 IP 257
+P
Sbjct: 204 VP 205
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 108/235 (45%), Gaps = 12/235 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 89 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 147
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 148 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ + P +D+ + L++ + ++ EL C Q+ DRP
Sbjct: 207 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 108/235 (45%), Gaps = 12/235 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 33 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 92
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 93 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 151
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 152 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ + P +D+ + L++ + ++ EL C Q+ DRP
Sbjct: 211 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 261
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERL-LV 136
V G + N+ VA+K + F+ EA+ + +RH LV L+G E L +V
Sbjct: 209 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+YM +L +L + L + ++ + + +A+++ N ++ DL A VL E
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVSE 324
Query: 197 DGDPRLSSFGLMKNSRDGKSYST-NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKH 255
D ++S FGL K + + + +T PE LR + +S ++S+G +L ++ S
Sbjct: 325 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
Query: 256 IP 257
+P
Sbjct: 385 VP 386
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 108/235 (45%), Gaps = 12/235 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 152
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 153 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ + P +D+ + L++ + ++ EL C Q+ DRP
Sbjct: 212 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 117/264 (44%), Gaps = 14/264 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 30 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 89
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 90 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 148
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + + G + + +T PE L + +S ++++G +L ++
Sbjct: 149 HLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ + P +D+ + L++ + ++ EL C Q+ DRP
Sbjct: 207 AT-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 262
Query: 311 LLSAVAPLQKQTEVASHVLMGLSK 334
+ A + +++ ++ V L K
Sbjct: 263 IHQAFETMFQESSISDEVEKELGK 286
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 108/235 (45%), Gaps = 12/235 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 89 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 147
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 148 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ + P +D+ + L++ + ++ EL C Q+ DRP
Sbjct: 207 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 257
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 116/264 (43%), Gaps = 14/264 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 86
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 87 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 145
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + + G + + +T PE L + +S ++++G +L ++
Sbjct: 146 HLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ + P +D + L++ + ++ EL C Q+ DRP
Sbjct: 204 AT-YGMSPYPGID---PSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 259
Query: 311 LLSAVAPLQKQTEVASHVLMGLSK 334
+ A + +++ ++ V L K
Sbjct: 260 IHQAFETMFQESSISDEVEKELGK 283
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 108/235 (45%), Gaps = 12/235 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 93
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 152
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 153 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ + P +D+ + L++ + ++ EL C Q+ DRP
Sbjct: 212 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ +L A L E+
Sbjct: 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRNLAARNCLVGEN 354
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 355 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 414 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 470 HQAFETMFQESSISDEVEKELGK 492
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 233 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 292
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ +L A L E+
Sbjct: 293 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRNLAARNCLVGEN 351
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 352 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 410
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 411 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 467 HQAFETMFQESSISDEVEKELGK 489
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 334
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ +L A L E+
Sbjct: 335 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRNLAARNCLVGEN 393
Query: 198 GDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLL 251
+++ FGL + G +Y+ + + +T PE L + +S ++++G +L ++
Sbjct: 394 HLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 452
Query: 252 SGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFL 311
+ + P +D+ + L++ + ++ EL C Q+ DRP +
Sbjct: 453 T-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
Query: 312 LSAVAPLQKQTEVASHVLMGLSK 334
A + +++ ++ V L K
Sbjct: 509 HQAFETMFQESSISDEVEKELGK 531
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 106/236 (44%), Gaps = 14/236 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 94 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 152
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + + G + + +T PE L + +S ++++G +L ++
Sbjct: 153 HLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
+ + P +D+ + L++ + ++ EL C Q+ DRP
Sbjct: 211 AT-YGMSPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRP 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
++ E G VV G+ K VA+K S + +F EA + + H +LV G
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFYG 70
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
C++ +V +Y+ N L +L K P ++ + + Y + + + S ++ ++
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-LEMCYDVCEGMAFLES-HQFIHR 128
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST-----NLAYTPPEFLRTGRVIPESVI 240
DL A L D D ++S FG+ + D + S+ + ++ PE + +S +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300
+++G ++ ++ S +P D+ ++L + + + + ++ C
Sbjct: 189 WAFGILMWEVFSLGKMP----YDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHE 244
Query: 301 EAKDRPDVKFLLSAVAPLQKQ 321
+ RP + LLS++ PL+++
Sbjct: 245 LPEKRPTFQQLLSSIEPLREK 265
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 24 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVT 81
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 82 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 140
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 141 LVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 198
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 199 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 254
Query: 311 L 311
L
Sbjct: 255 L 255
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY G K L + ++ + +F+ EAA + ++H LV L+G C ++
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 86
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M L +L ++Q + + + +A I+ A+++ +N ++ DL A L E+
Sbjct: 87 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGEN 145
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + + G + + +T PE L + +S ++++G +L ++
Sbjct: 146 HLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ + P +D + L++ + ++ EL C Q+ DRP
Sbjct: 204 AT-YGMSPYPGID---PSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 259
Query: 311 LLSAVAPLQKQTEVA 325
+ A + +++ ++
Sbjct: 260 IHQAFETMFQESSIS 274
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 27 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 84
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 85 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 143
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 144 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 201
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 202 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 257
Query: 311 L 311
L
Sbjct: 258 L 258
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVG 257
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 316
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 375 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 430
Query: 311 L 311
L
Sbjct: 431 L 431
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
+V G V+ G + VA+K + S P F+ EA + ++H+RLV L
Sbjct: 17 LVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
+ + ++ +YM N +L L L + +A IA+ + +N ++
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHR 133
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPES 238
DL A +L + +++ FGL + +R+G + + +T PE + G +S
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP--IKWTAPEAINYGTFTIKS 191
Query: 239 VIYSYGTVLLDLLSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292
++S+G +L ++++ IP P ++ RG ++ + +L +
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQ 241
Query: 293 LASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
L C + +DRP +L S + TE
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 316
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 375 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 430
Query: 311 L 311
L
Sbjct: 431 L 431
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 316
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 375 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 430
Query: 311 L 311
L
Sbjct: 431 L 431
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 399
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 400 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 458 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 513
Query: 311 L 311
L
Sbjct: 514 L 514
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 31 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V ++ IA + + N ++ DL A +L E+
Sbjct: 89 EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY-VHRDLRAANILVGEN 147
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 148 LVCKVADFGLARLIEDNEWTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 206 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 261
Query: 311 L 311
L
Sbjct: 262 L 262
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 33/272 (12%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL V E G +V+ G N VAIK R+ F+ EA + + H +LV
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ-----ALDHC 176
L G C E LV ++M + LS +L R + + A+ LD C
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVC 114
Query: 177 NS-----QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPP 226
+ ++ DL A L E+ ++S FG+ + D + S+ + + P
Sbjct: 115 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 174
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E R +S ++S+G ++ ++ S IP + + ++ + +
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLA 230
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+T + ++ + C + +DRP LL +A +
Sbjct: 231 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVT 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 209 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 311 L 311
L
Sbjct: 265 L 265
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 31 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V ++ IA + + N ++ DL A +L E+
Sbjct: 89 EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY-VHRDLRAANILVGEN 147
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 148 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + E ++RP ++
Sbjct: 206 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 261
Query: 311 L 311
L
Sbjct: 262 L 262
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 71 GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCA 128
G+ VVY+ + R+VA+KR + + P + E + L + H +V+LI
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH 89
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYY-IAQALDHCNSQNRKLYHDL 187
LV ++M D K + +K L + ++++ Y + + + HC+ Q+R L+ DL
Sbjct: 90 SERCLTLVFEFMEKDL--KKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCH-QHRILHRDL 145
Query: 188 NAYRVLFDEDGDPRLSSFGLMKN-SRDGKSYS---TNLAYTPPEFLRTGRVIPESV-IYS 242
+L + DG +L+ FGL + +SY+ L Y P+ L + SV I+S
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWS 205
Query: 243 YGTVLLDLLSGKHIPPS 259
G + ++++GK + P
Sbjct: 206 IGCIFAEMITGKPLFPG 222
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 28/259 (10%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 37 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 94
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 95 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDT 153
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 154 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 211
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 212 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 261
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP +L S + TE
Sbjct: 262 RPTFDYLRSVLEDFFTATE 280
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 28/259 (10%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 34 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 92 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDT 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 151 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 208
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 209 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 258
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP +L S + TE
Sbjct: 259 RPTFDYLRSVLEDFFTATE 277
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 28/259 (10%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 35 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 92
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDT 151
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 152 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 210 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 259
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP +L S + TE
Sbjct: 260 RPTFDYLRSVLEDFFTATE 278
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 28/259 (10%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 39 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 96
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 97 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDT 155
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 156 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 213
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 214 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 263
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP +L S + TE
Sbjct: 264 RPTFDYLRSVLEDFFTATE 282
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 28/259 (10%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 38 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 95
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 96 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 154
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 155 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 213 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 262
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP +L S + TE
Sbjct: 263 RPTFDYLRSVLEDFFTATE 281
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 33/272 (12%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL V E G +V+ G N VAIK R+ F+ EA + + H +LV
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ-----ALDHC 176
L G C E LV ++M + LS +L R + + A+ LD C
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVC 113
Query: 177 NS-----QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPP 226
+ ++ DL A L E+ ++S FG+ + D + S+ + + P
Sbjct: 114 EGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E R +S ++S+G ++ ++ S IP + + ++ + +
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLA 229
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+T + ++ + C + +DRP LL +A +
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 111/259 (42%), Gaps = 28/259 (10%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDT 145
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 146 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 253
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP +L S + TE
Sbjct: 254 RPTFDYLRSVLEDFFTATE 272
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 71 GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCCA 128
G+ VVY+ + R+VA+KR + + P + E + L + H +V+LI
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH 89
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYY-IAQALDHCNSQNRKLYHDL 187
LV ++M D K + +K L + ++++ Y + + + HC+ Q+R L+ DL
Sbjct: 90 SERCLTLVFEFMEKDL--KKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCH-QHRILHRDL 145
Query: 188 NAYRVLFDEDGDPRLSSFGLMKN-SRDGKSYS---TNLAYTPPEFLRTGRVIPESV-IYS 242
+L + DG +L+ FGL + +SY+ L Y P+ L + SV I+S
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWS 205
Query: 243 YGTVLLDLLSGKHIPPS 259
G + ++++GK + P
Sbjct: 206 IGCIFAEMITGKPLFPG 222
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 33/272 (12%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL V E G +V+ G N VAIK R+ F+ EA + + H +LV
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ-----ALDHC 176
L G C E LV ++M + LS +L R + + A+ LD C
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVC 116
Query: 177 NS-----QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPP 226
+ ++ DL A L E+ ++S FG+ + D + S+ + + P
Sbjct: 117 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 176
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E R +S ++S+G ++ ++ S IP + + ++ + +
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLA 232
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+T + ++ + C + +DRP LL +A +
Sbjct: 233 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 33/272 (12%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL V E G +V+ G N VAIK R+ F+ EA + + H +LV
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ-----ALDHC 176
L G C E LV ++M + LS +L R + + A+ LD C
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVC 113
Query: 177 NS-----QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPP 226
+ ++ DL A L E+ ++S FG+ + D + S+ + + P
Sbjct: 114 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E R +S ++S+G ++ ++ S IP + + ++ + +
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLA 229
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+T + ++ + C + +DRP LL +A +
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVC 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 209 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 311 L 311
L
Sbjct: 265 L 265
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 209 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 311 L 311
L
Sbjct: 265 L 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 30 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 87
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 88 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 146
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 147 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 204
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 205 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 254
Query: 305 RPDVKFLLSAV 315
RP +L S +
Sbjct: 255 RPTFDYLRSVL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 145
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 146 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 253
Query: 305 RPDVKFLLSAV 315
RP +L S +
Sbjct: 254 RPTFDYLRSVL 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K +Q P F+ EA + ++H+RLV L + + ++
Sbjct: 24 VWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 81
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 82 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 140
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 141 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 198
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 199 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 248
Query: 305 RPDVKFLLSAV 315
RP +L S +
Sbjct: 249 RPTFDYLRSVL 259
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 33/272 (12%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL V E G +V+ G N VAIK R+ F+ EA + + H +LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ-----ALDHC 176
L G C E LV ++M + LS +L R + + A+ LD C
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVC 111
Query: 177 NS-----QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPP 226
+ ++ DL A L E+ ++S FG+ + D + S+ + + P
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 171
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E R +S ++S+G ++ ++ S IP + + ++ + +
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLA 227
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+T + ++ + C + +DRP LL +A +
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 31 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 88
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 89 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 147
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 148 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 205
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 206 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 255
Query: 305 RPDVKFLLSAV 315
RP +L S +
Sbjct: 256 RPTFDYLRSVL 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 35 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 92
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSDT 151
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 152 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 210 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 259
Query: 305 RPDVKFLLSAV 315
RP +L S +
Sbjct: 260 RPTFDYLRSVL 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 25 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 82
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 83 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 141
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 142 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 200 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 255
Query: 311 L 311
L
Sbjct: 256 L 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 23 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 80
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 81 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 139
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 140 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 197
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 198 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 253
Query: 311 L 311
L
Sbjct: 254 L 254
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVI 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 151 LVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 209 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 311 L 311
L
Sbjct: 265 L 265
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ DL A +L +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 145
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 146 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 253
Query: 305 RPDVKFLLSAV 315
RP +L S +
Sbjct: 254 RPTFDYLRSVL 264
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLAAANILVGEN 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 209 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 311 L 311
L
Sbjct: 265 L 265
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVI 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 209 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 311 L 311
L
Sbjct: 265 L 265
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 92 EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 209 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 311 L 311
L
Sbjct: 265 L 265
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 109/255 (42%), Gaps = 16/255 (6%)
Query: 66 IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
++ G+ V+ G N VAIK + P F+ EA + ++H +LV L
Sbjct: 13 LIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTM-SPESFLEEAQIMKKLKHDKLVQLYA 71
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
+E + +V +YM +L L + + L V +A +A + + N ++
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IHR 129
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPES 238
DL + +L +++ FGL + +R G + + +T PE GR +S
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKS 187
Query: 239 VIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCL 298
++S+G +L +L++ +P + + +L ++ + L EL C
Sbjct: 188 DVWSFGILLTELVTKGRVP----YPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCW 243
Query: 299 QYEAKDRPDVKFLLS 313
+ + ++RP ++L S
Sbjct: 244 KKDPEERPTFEYLQS 258
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 102
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 103 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 159
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 220 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 275
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 276 EMRPSFSELVSRISAI 291
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 97
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 98 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 154
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 155 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 214
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 215 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 270
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 271 EMRPSFSELVSRISAI 286
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 84 KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143
K+ LVA+K + F EA L N++H+ +V G C +GD ++V +YM +
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 144 TLSKHL--------FHWDKQP------LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
L+K L D QP L + +A IA + + SQ+ ++ DL
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF-VHRDLAT 161
Query: 190 YRVLFDEDGDPRLSSFGLMKNS------RDGKSYSTNLAYTPPEFLRTGRVIPESVIYSY 243
L + ++ FG+ ++ R G + + PPE + + ES ++S+
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 244 GTVLLDLLS 252
G +L ++ +
Sbjct: 222 GVILWEIFT 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 106 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 162
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 223 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 278
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 279 EMRPSFSELVSRISAI 294
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 123
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 124 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 180
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 181 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 240
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 241 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 296
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 297 EMRPSFSELVSRISAI 312
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 33/272 (12%)
Query: 63 SEL-IVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLV 121
SEL V E G +V+ G N VAIK S + F+ EA + + H +LV
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLV 85
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ-----ALDHC 176
L G C E LV ++M + LS +L R + + A+ LD C
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVC 133
Query: 177 NS-----QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN-----LAYTPP 226
+ ++ DL A L E+ ++S FG+ + D + S+ + + P
Sbjct: 134 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 193
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANED 286
E R +S ++S+G ++ ++ S IP + + ++ + +
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTGFRLYKPRLA 249
Query: 287 ATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+T + ++ + C + +DRP LL +A +
Sbjct: 250 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVM 91
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 92 EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 150
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 209 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 311 L 311
L
Sbjct: 265 L 265
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 104 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 160
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 220
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 221 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 276
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 277 EMRPSFSELVSRISAI 292
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 71 GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCC 127
G + VY+G+ + VA+K + + P P Q F E L RH ++ +G
Sbjct: 33 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
+ + +V Q+ +L HL H + + + +A A+ +D+ ++++ ++ DL
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDL 146
Query: 188 NAYRVLFDEDGDPRLSSFGL-MKNSRDGKSY-----STNLAYTPPEFLRTGRVIP---ES 238
+ + ED ++ FGL + SR S+ S ++ + PE +R P +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 239 VIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT---QLVELAS 295
+Y++G VL +L++G+ +P S+ + R + + ++ SL + + ++ L +
Sbjct: 207 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 296 KCLQYEAKDRPDVKFLLSAVAPLQKQ 321
+CL+ + +RP +L+ + L ++
Sbjct: 264 ECLKKKRDERPSFPRILAEIEELARE 289
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 124
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 125 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 181
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 182 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 241
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 242 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 297
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 298 EMRPSFSELVSRISAI 313
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 106 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 162
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 223 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 278
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 279 EMRPSFSELVSRISAI 294
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 101 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 157
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 218 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 273
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 274 EMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 105 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 161
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + YS + + + E L+T + +S ++S
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 222 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 277
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 278 EMRPSFSELVSRISAI 293
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 26/261 (9%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
LVA+K S F EA L N++H+ +V G C EGD ++V +YM + L+K
Sbjct: 45 LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 148 HL--------FHWDKQPLPWEMR----VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
L + P P E+ + +A IA + + SQ+ ++ DL L
Sbjct: 105 FLRAHGPDAVLMAEGNP-PTELTQSQMLHIAQQIAAGMVYLASQHF-VHRDLATRNCLVG 162
Query: 196 EDGDPRLSSFGLMKNS------RDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLD 249
E+ ++ FG+ ++ R G + + PPE + + ES ++S G VL +
Sbjct: 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222
Query: 250 LLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDV 308
+ + GK P + L ++ + Q ++ EL C Q E R ++
Sbjct: 223 IFTYGKQ--PWYQLS---NNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNI 277
Query: 309 KFLLSAVAPLQKQTEVASHVL 329
K + + + L K + V +L
Sbjct: 278 KGIHTLLQNLAKASPVYLDIL 298
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 126/266 (47%), Gaps = 24/266 (9%)
Query: 71 GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCC 127
G + VY+G+ + VA+K + + P P Q F E L RH ++ +G
Sbjct: 33 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 88
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
+ + +V Q+ +L HL H + + + +A A+ +D+ ++++ ++ DL
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDL 146
Query: 188 NAYRVLFDEDGDPRLSSFGL-MKNSRDGKSY-----STNLAYTPPEFLRTGRVIP---ES 238
+ + ED ++ FGL + SR S+ S ++ + PE +R P +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 239 VIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT---QLVELAS 295
+Y++G VL +L++G+ +P S+ + R + + ++ SL + + ++ L +
Sbjct: 207 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 296 KCLQYEAKDRPDVKFLLSAVAPLQKQ 321
+CL+ + +RP +L+ + L ++
Sbjct: 264 ECLKKKRDERPSFPRILAEIEELARE 289
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 123/266 (46%), Gaps = 24/266 (9%)
Query: 71 GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQ---FVTEAAGLGNVRHKRLVNLIGCC 127
G + VY+G+ + VA+K + + P P Q F E L RH ++ +G
Sbjct: 21 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 128 AEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
+ + +V Q+ +L HL H + + + +A A+ +D+ ++++ ++ DL
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDL 134
Query: 188 NAYRVLFDEDGDPRLSSFGL------MKNSRDGKSYSTNLAYTPPEFLRTGRVIP---ES 238
+ + ED ++ FGL S + S ++ + PE +R P +S
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 239 VIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDAT---QLVELAS 295
+Y++G VL +L++G+ +P S+ + R + + ++ SL + + ++ L +
Sbjct: 195 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 251
Query: 296 KCLQYEAKDRPDVKFLLSAVAPLQKQ 321
+CL+ + +RP +L+ + L ++
Sbjct: 252 ECLKKKRDERPSFPRILAEIEELARE 277
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 66 IVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
IV E GD A VY+ + K L A K +S + ++ E L H +V L+
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY 184
G + ++ ++ P + + D+ +++V V + +AL+ +S+ R ++
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSK-RIIH 132
Query: 185 HDLNAYRVLFDEDGDPRLSSFGL----MKNSRDGKSYSTNLAYTPPEFL--RTGRVIP-- 236
DL A VL +GD RL+ FG+ +K + S+ + PE + T + P
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 237 -ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
++ I+S G L+++ + PP H L+ +R
Sbjct: 193 YKADIWSLGITLIEMAQIE--PPHHELNPMR 221
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G + VA+K + S P F+ EA + ++H+RLV L + + ++
Sbjct: 25 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 82
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM N +L L L + +A IA+ + +N ++ +L A +L +
Sbjct: 83 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRNLRAANILVSDT 141
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 142 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 199
Query: 251 LSGKHIP------PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKD 304
++ IP P ++ RG ++ + +L +L C + +D
Sbjct: 200 VTHGRIPYPGMTNPEVIQNLERGYRMV----------RPDNCPEELYQLMRLCWKERPED 249
Query: 305 RPDVKFLLSAV 315
RP +L S +
Sbjct: 250 RPTFDYLRSVL 260
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 66 IVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
IV E GD A VY+ + K L A K +S + ++ E L H +V L+
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY 184
G + ++ ++ P + + D+ +++V V + +AL+ +S+ R ++
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSK-RIIH 140
Query: 185 HDLNAYRVLFDEDGDPRLSSFGL----MKNSRDGKSYSTNLAYTPPEFL--RTGRVIP-- 236
DL A VL +GD RL+ FG+ +K + S+ + PE + T + P
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 237 -ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
++ I+S G L+++ + PP H L+ +R
Sbjct: 201 YKADIWSLGITLIEMAQIE--PPHHELNPMR 229
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 16/241 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G VAIK + P F+ EA + +RH++LV L +E + +V
Sbjct: 201 VWMGTWNGTTRVAIKTLKPGNM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 258
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + L V +A IA + + N ++ DL A +L E+
Sbjct: 259 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGEN 317
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R G + + +T PE GR +S ++S+G +L +L
Sbjct: 318 LVCKVADFGLGRLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
Query: 251 LSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKF 310
+ +P ++ + +L ++ E L +L +C + + ++RP ++
Sbjct: 376 TTKGRVPYPGMVN----REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 431
Query: 311 L 311
L
Sbjct: 432 L 432
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F A+ + + HK LV G C GDE +LV +++ +L +L +K + ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLE 117
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST----- 219
VA +A A+ H +N ++ ++ A +L + D + + +K S G S +
Sbjct: 118 VAKQLAAAM-HFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 220 ---NLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMD 275
+ + PPE + + + + +S+GT L ++ SG P S ALD R L D
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQR--KLQFYED 233
Query: 276 SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
Q A +L L + C+ YE RP + ++
Sbjct: 234 RH---QLPAPKAAELANLINNCMDYEPDHRPSFRAII 267
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 24/257 (9%)
Query: 85 NNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP 141
+VA+K P + E L + H+ ++ GCC + E+ LV +Y+P
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
+L +L + + + A I + + + +SQ+ ++ +L A VL D D +
Sbjct: 102 LGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQHY-IHRNLAARNVLLDNDRLVK 157
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K +G Y + + + PE L+ + S ++S+G L +LL+
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 217
Query: 253 -GKHIPPSHALDVI---RGKNLLLLMDSSLE-GQ---YANEDATQLVELASKCLQYEAKD 304
PP+ L++I +G+ +L + LE G+ ++ ++ L C + EA
Sbjct: 218 DSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASF 277
Query: 305 RPDVKFLLSAVAPLQKQ 321
RP + L+ + + ++
Sbjct: 278 RPTFENLIPILKTVHEK 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWD--KQPLPWE 160
++F+ E A + +RH +V +G + +V +Y+ +L + L H ++ L
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDER 137
Query: 161 MRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
R+ +AY +A+ +++ +++N + H DL + +L D+ ++ FGL + S
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK 197
Query: 220 NLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HIPPSHALDVIRGKNLL 271
A TP PE LR +S +YS+G +L +L + + ++ P+ + + K
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 272 LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320
L + +L Q A + C E RP ++ + PL K
Sbjct: 258 LEIPRNLNPQVA--------AIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 120/256 (46%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + + S+ + ++ DL A
Sbjct: 105 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAAR 161
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 222 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 277
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 278 EMRPSFSELVSRISAI 293
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F A+ + + HK LV G C GDE +LV +++ +L +L +K + ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK-NKNCINILWKLE 117
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST----- 219
VA +A A+ H +N ++ ++ A +L + D + + +K S G S +
Sbjct: 118 VAKQLAWAM-HFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 220 ---NLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMD 275
+ + PPE + + + + +S+GT L ++ SG P S ALD R L D
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQR--KLQFYED 233
Query: 276 SSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
Q A +L L + C+ YE RP + ++
Sbjct: 234 RH---QLPAPKAAELANLINNCMDYEPDHRPSFRAII 267
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 24/257 (9%)
Query: 85 NNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP 141
+VA+K P + E L + H+ ++ GCC + E+ LV +Y+P
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
+L +L + + + A I + + + ++Q+ ++ +L A VL D D +
Sbjct: 102 LGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQHY-IHRNLAARNVLLDNDRLVK 157
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K +G Y + + + PE L+ + S ++S+G L +LL+
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 217
Query: 253 -GKHIPPSHALDVI---RGKNLLLLMDSSLE-GQ---YANEDATQLVELASKCLQYEAKD 304
PP+ L++I +G+ +L + LE G+ ++ ++ L C + EA
Sbjct: 218 DSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASF 277
Query: 305 RPDVKFLLSAVAPLQKQ 321
RP + L+ + + ++
Sbjct: 278 RPTFENLIPILKTVHEK 294
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 85 NNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143
+VAIK + + D + TE L N+RH+ + L ++ +V +Y P
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAY-YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRL 202
L ++ D+ E RV + I A+ + +SQ + DL +LFDE +L
Sbjct: 94 ELFDYIISQDRLS---EEETRVVFRQIVSAVAYVHSQGYA-HRDLKPENLLFDEYHKLKL 149
Query: 203 SSFGLMKNSRDGKSY-----STNLAYTPPEFLRTGRVI-PESVIYSYGTVLLDLLSG 253
FGL + K Y +LAY PE ++ + E+ ++S G +L L+ G
Sbjct: 150 IDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
I + LD+ +S+ RK++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 125 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 226 -PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS---LEGQ 281
PE ++ ++ I+S G ++L G+ PP+ L +R L L+ +S LEGQ
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMR--VLFLIPKNSPPTLEGQ 239
Query: 282 YANEDATQLVELASKCLQYEAKDRPDVKFLL 312
++ E CL + + RP K LL
Sbjct: 240 HSK----PFKEFVEACLNKDPRFRPTAKELL 266
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 137 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 251
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L+EL C QY K RP ++S++
Sbjct: 252 DMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 107/254 (42%), Gaps = 17/254 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G N+ VA+K + F+ EA + ++H +LV L + ++
Sbjct: 29 VWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIIT 87
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
+YM +L L + + + + IA+ + + +N ++ DL A VL E
Sbjct: 88 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 146
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 251 LSGKHIP-PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVK 309
++ IP P +++ + +L ++ C + +A++RP
Sbjct: 205 VTYGKIPYPGRT-----NADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFD 259
Query: 310 FLLSAVAPLQKQTE 323
+L S + TE
Sbjct: 260 YLQSVLDDFYTATE 273
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWD--KQPLPWE 160
++F+ E A + +RH +V +G + +V +Y+ +L + L H ++ L
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDER 137
Query: 161 MRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
R+ +AY +A+ +++ +++N + H +L + +L D+ ++ FGL + S
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK 197
Query: 220 NLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HIPPSHALDVIRGKNLL 271
+ A TP PE LR +S +YS+G +L +L + + ++ P+ + + K
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 272 LLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQK 320
L + +L Q A + C E RP ++ + PL K
Sbjct: 258 LEIPRNLNPQVA--------AIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 146 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 260
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 261 DMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 16/238 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VYR R K VAIK + + D + + EA + + + +V LIG C + + +LV
Sbjct: 30 VYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+ L K L ++ +P + + ++ + + +N ++ DL A VL
Sbjct: 88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNVLLVN 145
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYGTVLLD 249
++S FGL K SY T L + PE + + S ++SYG + +
Sbjct: 146 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
Query: 250 LLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
LS P ++G ++ ++ + E +L L S C Y+ +DRPD
Sbjct: 206 ALSYGQKPYKK----MKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPD 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 108
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 109 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTL 167
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
S L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 168 SGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 10/183 (5%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
V+ GRL+ +N LVA+K PD +F+ EA L H +V LIG C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V + + L + L + +++ A +++ S+ ++ DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVT 247
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLD 249
E ++S FG+ + DG ++ + +T PE L GR ES ++S+G +L +
Sbjct: 248 EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 250 LLS 252
S
Sbjct: 308 TFS 310
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 145 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 259
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 260 DMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 145 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 259
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 260 DMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 143 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 257
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 258 DMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 146 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 260
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 261 DMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 10/183 (5%)
Query: 78 VYRGRLK-NNRLVAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
V+ GRL+ +N LVA+K PD +F+ EA L H +V LIG C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V + + L + L + +++ A +++ S+ ++ DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVT 247
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLD 249
E ++S FG+ + DG ++ + +T PE L GR ES ++S+G +L +
Sbjct: 248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 250 LLS 252
S
Sbjct: 308 TFS 310
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 139 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 253
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 254 DMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE L N RH L L D V +Y L FH ++ + E R R
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 255
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I ALD+ +S+ +Y DL ++ D+DG +++ FGL K +DG K++
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 315
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 316 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 349
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 152 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 266
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 267 DMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE L N RH L L D V +Y L FH ++ + E R R
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 252
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I ALD+ +S+ +Y DL ++ D+DG +++ FGL K +DG K++
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 312
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 313 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 346
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 55 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 109
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ ++++FG ++ + +
Sbjct: 110 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 168
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 169 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 210
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 110
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ ++++FG ++ + +
Sbjct: 111 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 169
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 170 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 211
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 108/254 (42%), Gaps = 17/254 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
V+ G N+ VA+K + F+ EA + ++H +LV L + + ++
Sbjct: 28 VWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 86
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
++M +L L + + + + IA+ + + +N ++ DL A VL E
Sbjct: 87 EFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 145
Query: 198 GDPRLSSFGLMK-------NSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDL 250
+++ FGL + +R+G + + +T PE + G +S ++S+G +L ++
Sbjct: 146 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIKSNVWSFGILLYEI 203
Query: 251 LSGKHIP-PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVK 309
++ IP P +++ + +L ++ C + +A++RP
Sbjct: 204 VTYGKIPYPGRT-----NADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFD 258
Query: 310 FLLSAVAPLQKQTE 323
+L S + TE
Sbjct: 259 YLQSVLDDFYTATE 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 110
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 111 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 170 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 211
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 16/249 (6%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G A VY + + VAI++ + Q P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 130 GDERLLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
GDE +V +Y+ +L+ + D+ + V QAL+ +S N+ ++ D+
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRECLQALEFLHS-NQVIHRDI 142
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSY 243
+ +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
G + ++++ G+ PP + +R L+ + + E Q + + + ++CL+ + +
Sbjct: 203 GIMAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 259
Query: 304 DRPDVKFLL 312
R K LL
Sbjct: 260 KRGSAKELL 268
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + S+ + ++ DL A
Sbjct: 165 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK-KFVHRDLAAR 221
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 281
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 282 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 337
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 338 EMRPSFSELVSRISAI 353
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 110
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 111 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 170 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 211
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 112
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 113 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 172 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 108
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 109 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL 167
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 168 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 209
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P + K L Q L
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDE 112
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 113 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 172 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 213
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 70 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 124
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 125 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 183
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 184 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 225
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + S+ + ++ DL A
Sbjct: 104 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK-KFVHRDLAAR 160
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 220
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 221 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 276
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 277 EMRPSFSELVSRISAI 292
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 50 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 104
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 105 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 163
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 164 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 205
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L P +++A IA +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 142 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 256
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 257 DMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 110
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 111 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 169
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 170 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 211
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 174 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 288
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 289 DMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 52 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 106
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 107 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 165
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 166 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 207
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 106
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + S+ + ++ DL A
Sbjct: 107 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK-KFVHRDLAAR 163
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 164 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 223
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 224 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 279
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 280 EMRPSFSELVSRISAI 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + S+ + ++ DL A
Sbjct: 106 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK-KFVHRDLAAR 162
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 223 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 278
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 279 EMRPSFSELVSRISAI 294
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 107
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 108 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 167 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 208
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + S+ + ++ DL A
Sbjct: 106 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK-KFVHRDLAAR 162
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 223 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 278
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 279 EMRPSFSELVSRISAI 294
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 111
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 112 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 170
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 171 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 212
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L + P +++A IA +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A ED ++ FG+ ++ R G + + PE
Sbjct: 139 AYLNA-NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 253
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L+EL C QY K RP ++S++
Sbjct: 254 DMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 107
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 108 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 167 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDE 111
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L +G+ +++ FG ++ + +
Sbjct: 112 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL 170
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L G +PP A
Sbjct: 171 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVG--MPPFEA 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 79 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 133
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 134 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 192
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 193 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 16/249 (6%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G A VY + + VAI++ + Q P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 130 GDERLLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
GDE +V +Y+ +L+ + D+ + V QAL+ +S N+ ++ D+
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRECLQALEFLHS-NQVIHRDI 142
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSY 243
+ +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
G + ++++ G+ PP + +R L+ + + E Q + + + ++CL + +
Sbjct: 203 GIMAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVE 259
Query: 304 DRPDVKFLL 312
R K LL
Sbjct: 260 KRGSAKELL 268
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 106
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + S+ + ++ DL A
Sbjct: 107 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK-KFVHRDLAAR 163
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 164 NCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 223
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 224 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 279
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 280 EMRPSFSELVSRISAI 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%), Gaps = 22/256 (8%)
Query: 78 VYRGRLKNNR----LVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--AEG 130
VY G L +N A+K +R + + QF+TE + + H +++L+G C +EG
Sbjct: 51 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 110
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L+V YM + L + + P ++ + +A+ + S+ + ++ DL A
Sbjct: 111 SP-LVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK-KFVHRDLAAR 167
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVIYS 242
+ DE +++ FGL ++ D + S + + + E L+T + +S ++S
Sbjct: 168 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 227
Query: 243 YGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEA 302
+G +L +L++ + PP ++ LL L+ +Y + L E+ KC +A
Sbjct: 228 FGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKA 283
Query: 303 KDRPDVKFLLSAVAPL 318
+ RP L+S ++ +
Sbjct: 284 EMRPSFSELVSRISAI 299
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 69 ESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHKRLV 121
E G + +VY G K VAIK + S + +F+ EA+ + +V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 122 NLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQ--------PLPWEMRVRVAYYIAQAL 173
L+G ++G L++ + M L +L P +++A IA +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 174 DHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPE 227
+ N+ N+ ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 152 AYLNA-NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 228 FLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
L+ G S ++S+G VL ++ + P L + L +M+ L + N
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAE-QPYQGLS--NEQVLRFVMEGGLLDKPDN-CP 266
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAV 315
L EL C QY K RP ++S++
Sbjct: 267 DMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 57 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDE 111
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L +G+ +++ FG ++ + +
Sbjct: 112 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTL 170
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L G +PP A
Sbjct: 171 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVG--MPPFEA 212
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE L N RH L L D V +Y L FH ++ + E R R
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 113
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I ALD+ +S+ +Y DL ++ D+DG +++ FGL K +DG K +
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 173
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 174 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE L N RH L L D V +Y L FH ++ + E R R
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 112
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I ALD+ +S+ +Y DL ++ D+DG +++ FGL K +DG K +
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 172
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 173 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE L N RH L L D V +Y L FH ++ + E R R
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARF 114
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I ALD+ +S+ +Y DL ++ D+DG +++ FGL K +DG K +
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGT 174
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 175 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 16/249 (6%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G A VY + + VAI++ + Q P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 130 GDERLLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
GDE +V +Y+ +L+ + D+ + V QAL+ +S N+ ++ D+
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRECLQALEFLHS-NQVIHRDI 142
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSY 243
+ +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
G + ++++ G+ PP + +R L+ + + E Q + + + ++CL + +
Sbjct: 203 GIMAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVE 259
Query: 304 DRPDVKFLL 312
R K LL
Sbjct: 260 KRGSAKELL 268
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 55 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 109
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 110 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 168
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 169 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P + K L Q L
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDE 112
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 113 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 171
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 172 XGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 110
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 111 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 169
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 170 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 107
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 108 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 167 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 208
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 24/259 (9%)
Query: 85 NNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAE-GDERL-LVAQYMP 141
+VA+K + P + E L + H+ ++ GCC + G L LV +Y+P
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
+L +L + + + A I + + + ++Q+ ++ DL A VL D D +
Sbjct: 119 LGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQHY-IHRDLAARNVLLDNDRLVK 174
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K +G + + + PE L+ + S ++S+G L +LL+
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 234
Query: 253 -GKHIPPSHALDVI---RGKNLLLLMDSSLE-GQ---YANEDATQLVELASKCLQYEAKD 304
PP+ L++I +G+ +L + LE G+ ++ ++ L C + EA
Sbjct: 235 DSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASF 294
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP + L+ + + ++ +
Sbjct: 295 RPTFENLIPILKTVHEKYQ 313
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 16/249 (6%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G A VY + + VAI++ + Q P + E + ++ +VN +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 130 GDERLLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
GDE +V +Y+ +L+ + D+ + V QAL+ +S N+ ++ D+
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRECLQALEFLHS-NQVIHRDI 143
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSY 243
+ +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
G + ++++ G+ PP + +R L+ + + E Q + + + ++CL+ + +
Sbjct: 204 GIMAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 260
Query: 304 DRPDVKFLL 312
R K L+
Sbjct: 261 KRGSAKELI 269
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 108
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 109 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 168 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 209
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 107
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 108 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL 166
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 167 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 78 VYRGRLKNNRLV-AIKRFSRQSWPDP---HQFVTEAAGLGNVRHKRLVNLIGCCAEGDER 133
VY R KN++ + A+K + HQ E ++RH ++ L G +
Sbjct: 24 VYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRV 83
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYI---AQALDHCNSQNRKLYHDLNAY 190
L+ +Y P T+ + L Q L R A YI A AL +C+S+ + ++ D+
Sbjct: 84 YLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHSK-KVIHRDIKPE 137
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGK--SYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVL 247
+L G+ +++ FG ++ + + L Y PPE + GR+ E V ++S G +
Sbjct: 138 NLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIE-GRMHDEKVDLWSLGVLC 196
Query: 248 LDLLSGKHIPPSHA 261
+ L GK PP A
Sbjct: 197 YEFLVGK--PPFEA 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 112
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 113 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 171
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 172 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 107
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 108 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 167 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 107
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 108 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 166
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 167 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 53 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 107
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 108 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL 166
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 167 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 122
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 123 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 237
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 79 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 133
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 134 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 192
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 193 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 234
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 112
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ + +
Sbjct: 113 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDS 276
L Y PPE + GR E V ++S G + + L GK PP A + ++
Sbjct: 172 CGTLDYLPPEXIE-GRXHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQETYKRISRVEF 228
Query: 277 SLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
+ + E A L+ S+ L++ RP ++ +L
Sbjct: 229 TFP-DFVTEGARDLI---SRLLKHNPSQRPXLREVL 260
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 139
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 140 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 254
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 255 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMR 162
HQ E ++RH ++ L G + L+ +Y P T+ + L Q L
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDE 110
Query: 163 VRVAYYI---AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK--SY 217
R A YI A AL +C+S+ R ++ D+ +L G+ +++ FG ++ +
Sbjct: 111 QRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 169
Query: 218 STNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHA 261
L Y PPE + GR+ E V ++S G + + L GK PP A
Sbjct: 170 CGTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 16/238 (6%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSW-PDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
VYR R K VAIK + + D + + EA + + + +V LIG C + + +LV
Sbjct: 356 VYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 413
Query: 137 AQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDE 196
+ L K L ++ +P + + ++ + + +N ++ +L A VL
Sbjct: 414 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNF-VHRNLAARNVLLVN 471
Query: 197 DGDPRLSSFGLMKNSRDGKSYSTN-------LAYTPPEFLRTGRVIPESVIYSYGTVLLD 249
++S FGL K SY T L + PE + + S ++SYG + +
Sbjct: 472 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
Query: 250 LLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
LS P ++G ++ ++ + E +L L S C Y+ +DRPD
Sbjct: 532 ALSYGQKP----YKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPD 585
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + +D +P E
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ R++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + +D +P E
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 149
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 150 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 264
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 265 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 66 IVSESGDKAPNVVYRGRLKNNR-LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
I+ E GD A VY+ + K L A K +S + ++ E L + H +V L+
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRK 182
+ ++ ++ + + ++ PL E +++V Q LD N N+
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELER-PLT-ESQIQVV--CKQTLDALNYLHDNKI 156
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDGK---SYSTNLAYTPPEFL--RTGRVIP 236
++ DL A +LF DGD +L+ FG+ KN+R + S+ + PE + T + P
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 237 ---ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
++ ++S G L+++ + PP H L+ +R
Sbjct: 217 YDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V +YM N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMGF-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SY 217
V +Y+A+ ALDH +S +Y DL +L DE+G +L+ FGL K S D + S+
Sbjct: 129 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG 253
+ Y PE + + +S+G ++ ++L+G
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 66 IVSESGDKAPNVVYRGRLKNNR-LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
I+ E GD A VY+ + K L A K +S + ++ E L + H +V L+
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRK 182
+ ++ ++ + + ++ PL E +++V Q LD N N+
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELER-PLT-ESQIQVV--CKQTLDALNYLHDNKI 156
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDGK---SYSTNLAYTPPEFL--RTGRVIP 236
++ DL A +LF DGD +L+ FG+ KN+R + S+ + PE + T + P
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 237 ---ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
++ ++S G L+++ + PP H L+ +R
Sbjct: 217 YDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F++EA+ +G H +++L G + +++ ++M N +L L D Q ++ V
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-VG 139
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS---YSTNL 221
+ IA + + N ++ DL A +L + + ++S FGL + D S Y++ L
Sbjct: 140 MLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL 198
Query: 222 A------YTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+T PE ++ + S ++SYG V+ +++S
Sbjct: 199 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SY 217
V +Y+A+ ALDH +S +Y DL +L DE+G +L+ FGL K S D + S+
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG 253
+ Y PE + + +S+G ++ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 108/249 (43%), Gaps = 16/249 (6%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAE 129
G A VY + + VAI++ + Q P + E + ++ +VN +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 130 GDERLLVAQYMPNDTLSKHLFH--WDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDL 187
GDE +V +Y+ +L+ + D+ + V QAL+ +S N+ ++ ++
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRECLQALEFLHS-NQVIHRNI 143
Query: 188 NAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSY 243
+ +L DG +L+ FG +S + + TP PE + P+ I+S
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 244 GTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAK 303
G + ++++ G+ PP + +R L+ + + E Q + + + ++CL+ + +
Sbjct: 204 GIMAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 260
Query: 304 DRPDVKFLL 312
R K L+
Sbjct: 261 KRGSAKELI 269
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SY 217
V +Y+A+ ALDH +S +Y DL +L DE+G +L+ FGL K S D + S+
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG 253
+ Y PE + + +S+G ++ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + +D +P E
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 146 LVSCTYQLARGMEYLASQ-KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
I + LD+ +S+ +K++ D+ A VL E GD +L+ FG+ D + TP
Sbjct: 129 ILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 226 -PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE ++ ++ I+S G ++L G+ PP+ + +R +L L+ +
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMR---VLFLIPKNNPPTLVG 242
Query: 285 EDATQLVELASKCLQYEAKDRPDVKFLL 312
+ E CL + RP K LL
Sbjct: 243 DFTKSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 71 GDKAPNVVYRGRLKNNRL-VAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCA 128
G+ VY+G K + VA+K S P + E + + ++H+ +V L
Sbjct: 14 GNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH 73
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYY----IAQALDHCNSQNRKLY 184
++ LV ++M ND L K++ P + + + Y + Q L C+ +N+ L+
Sbjct: 74 TENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-ENKILH 131
Query: 185 HDLNAYRVLFDEDGDPRLSSFGLMKN----SRDGKSYSTNLAYTPPEFLRTGRVIPESV- 239
DL +L ++ G +L FGL + S L Y P+ L R S+
Sbjct: 132 RDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSID 191
Query: 240 IYSYGTVLLDLLSGKHIPPS 259
I+S G +L ++++GK + P
Sbjct: 192 IWSCGCILAEMITGKPLFPG 211
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 88 LVAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND--- 143
+VA+K ++ D F EAA + + +V L+G CA G L+ +YM
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 144 ----TLSKH----LFHWD-----------KQPLPWEMRVRVAYYIAQALDHCNSQNRKLY 184
++S H L H D PL ++ +A +A + + S+ + ++
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL-SERKFVH 197
Query: 185 HDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPES 238
DL L E+ +++ FGL +N Y + + + PPE + R ES
Sbjct: 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 257
Query: 239 VIYSYGTVLLDLLS 252
+++YG VL ++ S
Sbjct: 258 DVWAYGVVLWEIFS 271
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + +D +P E
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + +D +P E
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 85 NNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP 141
+VA+K P + E L + H+ +V GCC + E+ LV +Y+P
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
+L +L + + + A I + + + ++Q+ ++ L A VL D D +
Sbjct: 96 LGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQH-YIHRALAARNVLLDNDRLVK 151
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K +G Y + + + PE L+ + S ++S+G L +LL+
Sbjct: 152 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYC 211
Query: 253 ----GKHIPPSHALDVIRGKNLLLLMDSSLE-GQ---YANEDATQLVELASKCLQYEAKD 304
H + + +G+ +L + LE G+ + ++ L C + EA
Sbjct: 212 DSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASF 271
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP + L+ + Q++ +
Sbjct: 272 RPTFQNLVPILQTAQEKYQ 290
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + +D +P E
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 151 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 85 NNRLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP 141
+VA+K P + E L + H+ +V GCC + E+ LV +Y+P
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
+L +L + + + A I + + + ++Q+ ++ L A VL D D +
Sbjct: 97 LGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQH-YIHRALAARNVLLDNDRLVK 152
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K +G Y + + + PE L+ + S ++S+G L +LL+
Sbjct: 153 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYC 212
Query: 253 ----GKHIPPSHALDVIRGKNLLLLMDSSLE-GQ---YANEDATQLVELASKCLQYEAKD 304
H + + +G+ +L + LE G+ + ++ L C + EA
Sbjct: 213 DSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASF 272
Query: 305 RPDVKFLLSAVAPLQKQTE 323
RP + L+ + Q++ +
Sbjct: 273 RPTFQNLVPILQTAQEKYQ 291
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 85 NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144
+ +LVA+K+ + E + + +H+ +V + GDE +V +++
Sbjct: 44 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
L+ + H E V + QAL ++Q ++ D+ + +L DG +LS
Sbjct: 104 LTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSD 159
Query: 205 FGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HI 256
FG L TP PE + PE I+S G ++++++ G+ +
Sbjct: 160 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219
Query: 257 PPSHALDVIR 266
PP A+ +IR
Sbjct: 220 PPLKAMKMIR 229
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + +D +P E
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 148 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 66 IVSESGDKAPNVVYRGRLKNNR-LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
I+ E GD A VY+ + K L A K +S + ++ E L + H +V L+
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRK 182
+ ++ ++ + + ++ PL E +++V Q LD N N+
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELER-PLT-ESQIQVV--CKQTLDALNYLHDNKI 156
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDGKSYSTNLA---YTPPEFL--RTGRVIP 236
++ DL A +LF DGD +L+ FG+ KN+R + + + PE + T + P
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 237 ---ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
++ ++S G L+++ + PP H L+ +R
Sbjct: 217 YDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 85 NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144
+ +LVA+K+ + E + + +H+ +V + GDE +V +++
Sbjct: 48 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 107
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
L+ + H E V + QAL ++Q ++ D+ + +L DG +LS
Sbjct: 108 LTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSD 163
Query: 205 FGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HI 256
FG L TP PE + PE I+S G ++++++ G+ +
Sbjct: 164 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 223
Query: 257 PPSHALDVIR 266
PP A+ +IR
Sbjct: 224 PPLKAMKMIR 233
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 114/255 (44%), Gaps = 22/255 (8%)
Query: 76 NVVYRG----RLKNNRLVAIKRFSRQS-WPDPHQFVTEAAGLGNVRHKRLVNLIGCC--A 128
VVY G + +N AIK SR + F+ E + + H ++ LIG
Sbjct: 35 GVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP 94
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLN 188
EG +L+ YM + L + + + P ++ + +A+ +++ Q + ++ DL
Sbjct: 95 EGLPHVLLP-YMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQ-KFVHRDLA 151
Query: 189 AYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN--------LAYTPPEFLRTGRVIPESVI 240
A + DE +++ FGL ++ D + YS + +T E L+T R +S +
Sbjct: 152 ARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDV 211
Query: 241 YSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQY 300
+S+G +L +LL+ + PP +D + L + +Y + Q+++ +C +
Sbjct: 212 WSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQ---QCWEA 267
Query: 301 EAKDRPDVKFLLSAV 315
+ RP + L+ V
Sbjct: 268 DPAVRPTFRVLVGEV 282
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 85 NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144
+ +LVA+K+ + E + + +H+ +V + GDE +V +++
Sbjct: 53 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
L+ + H + E V + QAL ++Q ++ D+ + +L DG +LS
Sbjct: 113 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSD 168
Query: 205 FGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HI 256
FG L TP PE + PE I+S G ++++++ G+ +
Sbjct: 169 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 228
Query: 257 PPSHALDVIR 266
PP A+ +IR
Sbjct: 229 PPLKAMKMIR 238
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L + +D +P E
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 205 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIA 170
+V L+G ++G L+V + M + L +L + P + +++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYT 224
+ + N++ + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE L+ G S ++S+G VL ++ S P +G + ++ ++G Y +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-------YQGLSNEQVLKFVMDGGYLD 252
Query: 285 ED---ATQLVELASKCLQYEAKDRP 306
+ ++ +L C Q+ K RP
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRP 277
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 85 NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144
+ +LVA+K+ + E + + +H+ +V + GDE +V +++
Sbjct: 55 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
L+ + H + E V + QAL ++Q ++ D+ + +L DG +LS
Sbjct: 115 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSD 170
Query: 205 FGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HI 256
FG L TP PE + PE I+S G ++++++ G+ +
Sbjct: 171 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 230
Query: 257 PPSHALDVIR 266
PP A+ +IR
Sbjct: 231 PPLKAMKMIR 240
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ +Y L ++L +D +P E
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIA 170
+V L+G ++G L+V + M + L +L + P + +++A IA
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYT 224
+ + N++ + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 138 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE L+ G S ++S+G VL ++ S P +G + ++ ++G Y +
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-------YQGLSNEQVLKFVMDGGYLD 249
Query: 285 ED---ATQLVELASKCLQYEAKDRP 306
+ ++ +L C Q+ K RP
Sbjct: 250 QPDNCPERVTDLMRMCWQFNPKMRP 274
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 38/281 (13%)
Query: 45 AFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWP 100
A +EF ++ A+ + V E G+ V GRLK VAIK + +
Sbjct: 18 AVREFA-KEIDASCIKIEKVIGVGEFGE-----VCSGRLKVPGKREICVAIKTL-KAGYT 70
Query: 101 DPHQ--FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLP 158
D + F++EA+ +G H +++L G + +++ +YM N +L L D +
Sbjct: 71 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV 130
Query: 159 WEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KS 216
++ V + I + + + + ++ DL A +L + + ++S FG+ + D +
Sbjct: 131 IQL-VGMLRGIGSGMKYLSDMS-AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 188
Query: 217 YSTN-----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP--PSHALDVIR--- 266
Y+T + +T PE + + S ++SYG V+ +++S P DVI+
Sbjct: 189 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 248
Query: 267 -GKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
G L MD + L +L C Q E DRP
Sbjct: 249 EGYRLPPPMDCPI----------ALHQLMLDCWQKERSDRP 279
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEM----- 161
+HK ++NL+G C + ++ +Y L ++L F ++ P E
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR--DGKSYST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ D +T
Sbjct: 152 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF--HWDKQPLPWEMR 162
F+ EA + ++H +LV L + + ++ ++M +L L KQPLP
Sbjct: 57 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KL 113
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK-------NSRDGK 215
+ + IA+ + +N ++ DL A +L +++ FGL + +R+G
Sbjct: 114 IDFSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 172
Query: 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHA-LDVIRGKNLLLL 273
+ + +T PE + G +S ++S+G +L+++++ IP P + +VIR
Sbjct: 173 KFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA------ 224
Query: 274 MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAV 315
++ +L + +C + ++RP +++ S +
Sbjct: 225 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
VTE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF 112
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I AL++ +S++ +Y D+ ++ D+DG +++ FGL K DG K++
Sbjct: 113 YGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 171
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 172 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 205
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H +V+L G G ++V ++M N L L D Q ++ V
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-VG 149
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS--YSTN-- 220
+ IA + + ++ DL A +L + + ++S FGL + D Y+T
Sbjct: 150 MLRGIAAGMRYLADMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG 208
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ +T PE ++ + S ++SYG V+ +++S
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ Y L ++L + +D +P E
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 102/230 (44%), Gaps = 23/230 (10%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF--HWDKQPLPWEMR 162
F+ EA + ++H +LV L + + ++ ++M +L L KQPLP
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KL 286
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK-------NSRDGK 215
+ + IA+ + +N ++ DL A +L +++ FGL + +R+G
Sbjct: 287 IDFSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 345
Query: 216 SYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHA-LDVIRGKNLLLL 273
+ + +T PE + G +S ++S+G +L+++++ IP P + +VIR
Sbjct: 346 KFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA------ 397
Query: 274 MDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
++ +L + +C + ++RP +++ S + TE
Sbjct: 398 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L V + +V+L + LV M + H+++ D+ P R +Y AQ
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRAIFYTAQ 297
Query: 172 ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
L+H + +N +Y DL VL D+DG+ R+S GL + G++ + A TP
Sbjct: 298 IVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 226 -PEFLRTGRVIPESVIY-SYGTVLLDLLSGK 254
PE L G SV Y + G L ++++ +
Sbjct: 357 APELL-LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 15/182 (8%)
Query: 86 NRLVAIKRF---SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142
N VAIK R+ +F E + H+ +V++I E D LV +Y+
Sbjct: 36 NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95
Query: 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRL 202
TLS+++ PL + + I + H + R ++ D+ +L D + ++
Sbjct: 96 PTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKI 152
Query: 203 SSFGLMKNSRDGKSYSTN-----LAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
FG+ K + TN + Y PE + G E IYS G VL ++L G+
Sbjct: 153 FDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGE-- 209
Query: 257 PP 258
PP
Sbjct: 210 PP 211
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 85 NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144
+ +LVA+K+ + E + + +H+ +V + GDE +V +++
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
L+ + H + E V + QAL ++Q ++ D+ + +L DG +LS
Sbjct: 158 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSD 213
Query: 205 FGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HI 256
FG L TP PE + PE I+S G ++++++ G+ +
Sbjct: 214 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273
Query: 257 PPSHALDVIR 266
PP A+ +IR
Sbjct: 274 PPLKAMKMIR 283
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 71 GDKAPNVVYRGRLKNN-RLVAIKRFSRQSWPDPHQFVTEAAG-----LGNVRHKRLVNLI 124
G+ + +V + R K+ R+VAIK+F D + V + A L +RH+ LVNL+
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKFLES---DDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 125 GCCAEGDERLLVAQYMPNDTLSK-HLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKL 183
C + LV +++ + L LF L +++ + + I + C+S N +
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSHN-II 146
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMKN-SRDGKSYSTNLA---YTPPEFL----RTGRVI 235
+ D+ +L + G +L FG + + G+ Y +A Y PE L + G+ +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAV 206
Query: 236 PESVIYSYGTVLLDLLSGKHIPPS 259
+++ G ++ ++ G+ + P
Sbjct: 207 D---VWAIGCLVTEMFMGEPLFPG 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 92/231 (39%), Gaps = 26/231 (11%)
Query: 94 FSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKH----- 148
SR S + + E A L N++H +V E +V Y L K
Sbjct: 59 ISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQK 118
Query: 149 --LFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSF 205
LF D Q L W ++ I AL H + +RK+ H D+ + + +DG +L F
Sbjct: 119 GVLFQED-QILDWFVQ------ICLALKHVH--DRKILHRDIKSQNIFLTKDGTVQLGDF 169
Query: 206 GLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
G+ + + TP PE +S I++ G VL +L + K HA
Sbjct: 170 GIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK-----HA 224
Query: 262 LDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLL 312
+ KNL+L + S + + L L S+ + +DRP V +L
Sbjct: 225 FEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H +++L G + ++V +YM N +L L D Q ++ V
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL-VG 128
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ I+ + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 129 MLRGISAGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 187
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHAL--DVIRGKNLLLLMD 275
+ +T PE + + S ++SYG V+ +++S P DVI+ +
Sbjct: 188 KIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLP 247
Query: 276 SSLEGQYANEDATQLVELASKCLQYEAKDRP 306
S ++ A L +L C Q E RP
Sbjct: 248 SPMDCPAA------LYQLMLDCWQKERNSRP 272
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L V + +V+L + LV M + H+++ D+ P R +Y AQ
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRAIFYTAQ 297
Query: 172 ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
L+H + +N +Y DL VL D+DG+ R+S GL + G++ + A TP
Sbjct: 298 IVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 226 -PEFLRTGRVIPESVIY-SYGTVLLDLLSGK 254
PE L G SV Y + G L ++++ +
Sbjct: 357 APELL-LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV-AYYIA 170
L NV+H LV L D+ V Y+ L +H ++ E R R A IA
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAAEIA 149
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----P 226
AL + +S N +Y DL +L D G L+ FGL K + + S ++ TP P
Sbjct: 150 SALGYLHSLNI-VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
Query: 227 EFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
E L + G VL ++L G +PP ++
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYS 241
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 38/281 (13%)
Query: 45 AFKEFVLADLRAATNGFSSELIVSESGDKAPNVVYRGRLK----NNRLVAIKRFSRQSWP 100
A +EF ++ A+ + V E G+ V GRLK VAIK + +
Sbjct: 3 AVREFA-KEIDASCIKIEKVIGVGEFGE-----VCSGRLKVPGKREICVAIKTL-KAGYT 55
Query: 101 DPHQ--FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLP 158
D + F++EA+ +G H +++L G + +++ +YM N +L L D +
Sbjct: 56 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV 115
Query: 159 WEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KS 216
++ V + I + + + + ++ DL A +L + + ++S FG+ + D +
Sbjct: 116 IQL-VGMLRGIGSGMKYLSDMSY-VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 173
Query: 217 YSTN-----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP--PSHALDVIR--- 266
Y+T + +T PE + + S ++SYG V+ +++S P DVI+
Sbjct: 174 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 233
Query: 267 -GKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
G L MD + L +L C Q E DRP
Sbjct: 234 EGYRLPPPMDCPI----------ALHQLMLDCWQKERSDRP 264
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
VTE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF 109
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I AL++ +S++ +Y D+ ++ D+DG +++ FGL K DG K++
Sbjct: 110 YGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 202
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L V + +V+L + LV M + H+++ D+ P R +Y AQ
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRAIFYTAQ 297
Query: 172 ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
L+H + +N +Y DL VL D+DG+ R+S GL + G++ + A TP
Sbjct: 298 IVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 226 -PEFLRTGRVIPESVIY-SYGTVLLDLLSGK 254
PE L G SV Y + G L ++++ +
Sbjct: 357 APELL-LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIA 170
+V L+G ++G L+V + M + L +L + P + +++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYT 224
+ + N++ + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE L+ G S ++S+G VL ++ S P +G + ++ ++G Y +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-------YQGLSNEQVLKFVMDGGYLD 252
Query: 285 ED---ATQLVELASKCLQYEAKDRP 306
+ ++ +L C Q+ K RP
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRP 277
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++NL+G C + ++ Y L ++L + +D +P E
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
VTE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF 109
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I AL++ +S++ +Y D+ ++ D+DG +++ FGL K DG K++
Sbjct: 110 YGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 202
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L V + +V+L + LV M + H+++ D+ P R +Y AQ
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRAIFYTAQ 297
Query: 172 ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP--- 225
L+H + +N +Y DL VL D+DG+ R+S GL + G++ + A TP
Sbjct: 298 IVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 226 -PEFLRTGRVIPESVIY-SYGTVLLDLLSGK 254
PE L G SV Y + G L ++++ +
Sbjct: 357 APELL-LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERL-LVAQYMPNDTLSKHLFHWDKQPLPWEMRV 163
F+ E + + H ++ IG + D+RL + +Y+ TL + D Q PW RV
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRV 111
Query: 164 RVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGL---------------- 207
A IA + + +S N ++ DLN++ L E+ + ++ FGL
Sbjct: 112 SFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 208 MKNSRDGKSYST--NLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSH 260
+K K Y+ N + PE + GR E V ++S+G VL +++ + P +
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V + M N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMG-AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIA 170
+V L+G ++G L+V + M + L +L + P + +++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYT 224
+ + N++ + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE L+ G S ++S+G VL ++ S P +G + ++ ++G Y +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-------YQGLSNEQVLKFVMDGGYLD 252
Query: 285 ED---ATQLVELASKCLQYEAKDRP 306
+ ++ +L C Q+ K RP
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRP 277
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 98/244 (40%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + + H+ +V IG + R ++ + M L L +P P
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 151 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 265
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 266 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 324
Query: 326 SHVL 329
+ L
Sbjct: 325 NTAL 328
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 113/265 (42%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIA 170
+V L+G ++G L+V + M + L +L + P + +++A IA
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYT 224
+ + N++ + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 140 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE L+ G S ++S+G VL ++ S P +G + ++ ++G Y +
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-------YQGLSNEQVLKFVMDGGYLD 251
Query: 285 ED---ATQLVELASKCLQYEAKDRP 306
+ ++ +L C Q+ K RP
Sbjct: 252 QPDNCPERVTDLMRMCWQFNPKMRP 276
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 98/244 (40%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + + H+ +V IG + R ++ + M L L +P P
Sbjct: 77 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 137 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 195
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 251
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 252 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 310
Query: 326 SHVL 329
+ L
Sbjct: 311 NTAL 314
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 135
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 136 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 250
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 251 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309
Query: 326 SHVL 329
+ L
Sbjct: 310 NTAL 313
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 32/248 (12%)
Query: 78 VYRGRLK----NNRLVAIKRFSRQSWPDPHQ--FVTEAAGLGNVRHKRLVNLIGCCAEGD 131
V GRLK VAIK + + D + F++EA+ +G H +++L G +
Sbjct: 24 VCSGRLKVPGKREICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK 82
Query: 132 ERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191
+++ +YM N +L L D + ++ V + I + + + + ++ DL A
Sbjct: 83 PVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIGSGMKYLSDMSY-VHRDLAARN 140
Query: 192 VLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-----LAYTPPEFLRTGRVIPESVIYSYG 244
+L + + ++S FG+ + D +Y+T + +T PE + + S ++SYG
Sbjct: 141 ILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYG 200
Query: 245 TVLLDLLSGKHIP--PSHALDVIR----GKNLLLLMDSSLEGQYANEDATQLVELASKCL 298
V+ +++S P DVI+ G L MD + L +L C
Sbjct: 201 IVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI----------ALHQLMLDCW 250
Query: 299 QYEAKDRP 306
Q E DRP
Sbjct: 251 QKERSDRP 258
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V + M N +L L D Q ++ V
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VG 122
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 123 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 237
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLF--HWDKQPLPWEMR 162
F+ EA + ++H +LV L + + ++ ++M +L L KQPLP
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KL 280
Query: 163 VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA 222
+ + IA+ + +N ++ DL A +L +++ FGL +R G + +
Sbjct: 281 IDFSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGL---ARVGAKFP--IK 334
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHA-LDVIRGKNLLLLMDSSLEG 280
+T PE + G +S ++S+G +L+++++ IP P + +VIR ++
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA------LERGYRM 388
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
+L + +C + ++RP +++ S + TE
Sbjct: 389 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 431
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 150
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 151 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 265
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 266 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 324
Query: 326 SHVL 329
+ L
Sbjct: 325 NTAL 328
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 135
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 136 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 250
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 251 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309
Query: 326 SHVL 329
+ L
Sbjct: 310 NTAL 313
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK----SY 217
V +Y+A+ LDH +S +Y DL +L DE+G +L+ FGL K + D + S+
Sbjct: 132 VKFYLAELALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 218 STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSG 253
+ Y PE + + +SYG ++ ++L+G
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 127
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 128 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 186
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 187 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 242
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 243 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 301
Query: 326 SHVL 329
+ L
Sbjct: 302 NTAL 305
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 83 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 142
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 143 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 201
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 202 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 257
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 258 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 316
Query: 326 SHVL 329
+ L
Sbjct: 317 NTAL 320
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 137 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 195
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 251
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 252 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 310
Query: 326 SHVL 329
+ L
Sbjct: 311 NTAL 314
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
VTE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF 109
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I AL++ +S++ +Y D+ ++ D+DG +++ FGL K DG K +
Sbjct: 110 YGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 202
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L H ++ L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 152 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 85 NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT 144
+ +LVA+K+ + E + + +H+ +V + GDE +V +++
Sbjct: 175 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
L+ + H + E V + QAL ++Q ++ D+ + +L DG +LS
Sbjct: 235 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSD 290
Query: 205 FGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HI 256
FG L TP PE + PE I+S G ++++++ G+ +
Sbjct: 291 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350
Query: 257 PPSHALDVIR 266
PP A+ +IR
Sbjct: 351 PPLKAMKMIR 360
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 78 VYRGRLK----NNRLVAIKRF-----SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA 128
V RGRLK VAIK RQ +F++EA+ +G H ++ L G
Sbjct: 30 VCRGRLKAPGKKESCVAIKTLKGGYTERQR----REFLSEASIMGQFEHPNIIRLEGVVT 85
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLN 188
+++ ++M N L L D Q ++ V + IA + + ++ ++ DL
Sbjct: 86 NSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-VGMLRGIASGMRYL-AEMSYVHRDLA 143
Query: 189 AYRVLFDEDGDPRLSSFGLMK----NSRDGKSYSTNLA------YTPPEFLRTGRVIPES 238
A +L + + ++S FGL + NS D +Y+++L +T PE + + S
Sbjct: 144 ARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYTSSLGGKIPIRWTAPEAIAFRKFTSAS 202
Query: 239 VIYSYGTVLLDLLSGKHIP 257
+SYG V+ +++S P
Sbjct: 203 DAWSYGIVMWEVMSFGERP 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
VTE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF 114
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I AL++ +S++ +Y D+ ++ D+DG +++ FGL K DG K +
Sbjct: 115 YGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGT 173
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 174 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 207
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L H ++ L +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 145 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 13/221 (5%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F+ EA+ +G H ++ L G + ++V + M N +L L D Q ++ V
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VG 151
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG--KSYSTN-- 220
+ IA + + + ++ DL A +L + + ++S FGL + D +Y+T
Sbjct: 152 MLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 221 ---LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSS 277
+ +T PE + + S ++SYG VL +++S P + ++++ +D
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVDEG 266
Query: 278 LEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL 318
+ L +L C Q + +RP + ++S + L
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L H ++ L +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 144 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 93 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 152
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 153 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 211
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 212 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 267
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 268 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 326
Query: 326 SHVL 329
+ L
Sbjct: 327 NTAL 330
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 176
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 177 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 236 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 291
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 292 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 350
Query: 326 SHVL 329
+ L
Sbjct: 351 NTAL 354
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L H ++ L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 152 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
VTE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF 109
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I AL++ +S++ +Y D+ ++ D+DG +++ FGL K DG K +
Sbjct: 110 YGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 202
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 94 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 153
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 154 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 212
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 213 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 268
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 269 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 327
Query: 326 SHVL 329
+ L
Sbjct: 328 NTAL 331
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVR 164
F++EA+ +G H +++L G + +++ ++M N +L L D Q ++ V
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-VG 113
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS---YSTNL 221
+ IA + + N ++ L A +L + + ++S FGL + D S Y++ L
Sbjct: 114 MLRGIAAGMKYLADMNY-VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL 172
Query: 222 A------YTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+T PE ++ + S ++SYG V+ +++S
Sbjct: 173 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD-- 213
+ + ++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 151 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 214 -------GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 265
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 266 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 324
Query: 326 SHVL 329
+ L
Sbjct: 325 NTAL 328
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L H ++ L +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 141 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
VTE+ L N RH L L D V +Y L FH ++ + E R R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF 109
Query: 166 -AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTN 220
I AL++ +S++ +Y D+ ++ D+DG +++ FGL K DG K +
Sbjct: 110 YGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGT 168
Query: 221 LAYTPPEFLRT---GRVIPESVIYSYGTVLLDLLSGK 254
Y PE L GR + + G V+ +++ G+
Sbjct: 169 PEYLAPEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 202
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK ++ L+G C + ++ +Y L ++L + +D +P E
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL---------FHWDKQPLPWEMR---- 162
+HK +++L+G C + ++ +Y L ++L + +D +P E
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 163 -VRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK--NSRDGKSYST 219
V Y +A+ +++ SQ + ++ DL A VL E+ +++ FGL + N+ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G ++ ++ +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L H ++ L +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 137 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L H ++ L +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 193 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEM 161
+HK ++NL+G C + ++ +Y L ++L H ++ L +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSY--ST 219
V AY +A+ +++ S+ + ++ DL A VL ED +++ FGL ++ Y +T
Sbjct: 152 LVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 220 N----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
N + + PE L +S ++S+G +L ++ +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 96/240 (40%), Gaps = 21/240 (8%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPWEMRV 163
F+ EA + H+ +V IG + R ++ + M L L +P P + +
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 164 RVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRD------ 213
++A+ + C Q N ++ D+ A L G R++ G +RD
Sbjct: 167 LDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 214 ---GKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVIRGKN 269
G + + PPE G ++ +S+G +L ++ S ++P PS + +
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQE 280
Query: 270 LLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASHVL 329
+L + S + + ++C Q++ +DRP+ +L + + +V + L
Sbjct: 281 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL 340
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 89 VAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145
VA+K +RQ S + E L RH ++ L + + +V +Y+ L
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 146 SKHLFHWDKQPLPWEMRVRVAYY-IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
++ K EM R + I A+D+C+ ++ ++ DL VL D + +++
Sbjct: 99 FDYIC---KHGRVEEMEARRLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIAD 154
Query: 205 FGLMKNSRDGKSYSTNLA---YTPPEFLRTGRVI--PESVIYSYGTVLLDLLSG------ 253
FGL DG+ T+ Y PE + +GR+ PE I+S G +L LL G
Sbjct: 155 FGLSNMMSDGEFLRTSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
Query: 254 KHIP 257
+H+P
Sbjct: 214 EHVP 217
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 112/265 (42%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIA 170
+V L+G ++G L+V + M + L +L + P + +++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYT 224
+ + N++ + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE L+ G S ++S+G VL ++ S P +G + ++ ++G Y +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-------YQGLSNEQVLKFVMDGGYLD 252
Query: 285 ED---ATQLVELASKCLQYEAKDRP 306
+ ++ +L C Q+ RP
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRP 277
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 84 KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143
++ LVA+K S F EA L ++H+ +V G C EG L+V +YM +
Sbjct: 46 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 144 TLSKHLFHWDKQ-------------PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L++ L PL + VA +A + + + ++ DL
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 164
Query: 191 RVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYG 244
L + ++ FG+ ++ R G + + PPE + + ES ++S+G
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 224
Query: 245 TVLLDLLS-GK----HIPPSHALDVI-RGKNL 270
VL ++ + GK + + A+D I +G+ L
Sbjct: 225 VVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 256
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 84 KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143
++ LVA+K S F EA L ++H+ +V G C EG L+V +YM +
Sbjct: 40 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 144 TLSKHLFHWDKQ-------------PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L++ L PL + VA +A + + + ++ DL
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 158
Query: 191 RVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYG 244
L + ++ FG+ ++ R G + + PPE + + ES ++S+G
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 218
Query: 245 TVLLDLLS-GK----HIPPSHALDVI-RGKNL 270
VL ++ + GK + + A+D I +G+ L
Sbjct: 219 VVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 250
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 20/260 (7%)
Query: 78 VYRGRLKNNRL----VAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY G N++ VA+K + D +F++EA + N+ H +V LIG E
Sbjct: 40 VYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPT 99
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
+++ Y P L H +K L V + I +A+ + S N ++ D+ +
Sbjct: 100 WIIMELY-PYGELG-HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNI 156
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP-----PEFLRTGRVIPESVIYSYGTVL 247
L +L FGL + D Y ++ P PE + R S ++ + +
Sbjct: 157 LVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM 216
Query: 248 LDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
++LS GK P L+ K+++ +++ + L L ++C Y+ DRP
Sbjct: 217 WEILSFGKQ--PFFWLE---NKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 271
Query: 307 DVKFLLSAVAPL-QKQTEVA 325
L+ +++ + Q + ++A
Sbjct: 272 RFTELVCSLSDVYQMEKDIA 291
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 20/260 (7%)
Query: 78 VYRGRLKNNRL----VAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY G N++ VA+K + D +F++EA + N+ H +V LIG E
Sbjct: 28 VYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPT 87
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
+++ Y P L H +K L V + I +A+ + S N ++ D+ +
Sbjct: 88 WIIMELY-PYGELG-HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNI 144
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP-----PEFLRTGRVIPESVIYSYGTVL 247
L +L FGL + D Y ++ P PE + R S ++ + +
Sbjct: 145 LVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM 204
Query: 248 LDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
++LS GK P L+ K+++ +++ + L L ++C Y+ DRP
Sbjct: 205 WEILSFGKQ--PFFWLE---NKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 259
Query: 307 DVKFLLSAVAPL-QKQTEVA 325
L+ +++ + Q + ++A
Sbjct: 260 RFTELVCSLSDVYQMEKDIA 279
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 20/260 (7%)
Query: 78 VYRGRLKNNRL----VAIKRFSRQSWPD-PHQFVTEAAGLGNVRHKRLVNLIGCCAEGDE 132
VY G N++ VA+K + D +F++EA + N+ H +V LIG E
Sbjct: 24 VYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPT 83
Query: 133 RLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRV 192
+++ Y P L H +K L V + I +A+ + S N ++ D+ +
Sbjct: 84 WIIMELY-PYGELG-HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNI 140
Query: 193 LFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP-----PEFLRTGRVIPESVIYSYGTVL 247
L +L FGL + D Y ++ P PE + R S ++ + +
Sbjct: 141 LVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM 200
Query: 248 LDLLS-GKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
++LS GK P L+ K+++ +++ + L L ++C Y+ DRP
Sbjct: 201 WEILSFGKQ--PFFWLE---NKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRP 255
Query: 307 DVKFLLSAVAPL-QKQTEVA 325
L+ +++ + Q + ++A
Sbjct: 256 RFTELVCSLSDVYQMEKDIA 275
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 84 KNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPND 143
++ LVA+K S F EA L ++H+ +V G C EG L+V +YM +
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 144 TLSKHLFHWDKQ-------------PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
L++ L PL + VA +A + + + ++ DL
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 187
Query: 191 RVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYG 244
L + ++ FG+ ++ R G + + PPE + + ES ++S+G
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 247
Query: 245 TVLLDLLS-GK----HIPPSHALDVI-RGKNL 270
VL ++ + GK + + A+D I +G+ L
Sbjct: 248 VVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 279
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 98/244 (40%), Gaps = 21/244 (8%)
Query: 101 DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQP-LPW 159
D F+ EA + H+ +V IG + R ++ + M L L +P P
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 160 EMRVRVAYYIAQALDHCNSQ----NRKLYHDLNAYRVLFDEDGDPR---LSSFGLMKN-- 210
+ + ++A+ + C Q N ++ D+ A L G R + FG+ ++
Sbjct: 137 SLAMLDLLHVARDI-ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY 195
Query: 211 ----SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP-PSHALDVI 265
R G + + PPE G ++ +S+G +L ++ S ++P PS +
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 251
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVA 325
+ +L + S + + ++C Q++ +DRP+ +L + + +V
Sbjct: 252 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 310
Query: 326 SHVL 329
+ L
Sbjct: 311 NTAL 314
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 24/266 (9%)
Query: 71 GDKAPNVVYRGRL-KNNRLVAIKRF-------SRQSWPDPHQFVTEAAGLGNVRHKRLVN 122
G +V++GRL K+ +VAIK + +F E + N+ H +V
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 123 LIGCCAEGDERLLVAQYMPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNR 181
L G + +V +++P L L DK P+ W +++R+ IA +++ +QN
Sbjct: 88 LYGLMH--NPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 182 KLYH-DLNAYRVL---FDEDGD--PRLSSFGLMKNSRDGKS-YSTNLAYTPPEFL--RTG 232
+ H DL + + DE+ +++ FGL + S S N + PE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEE 203
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292
++ YS+ +L +L+G+ ++ I+ N ++ + L + +L
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEGLRPTIPEDCPPRLRN 261
Query: 293 LASKCLQYEAKDRPDVKFLLSAVAPL 318
+ C + K RP +++ ++ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+ E L V + +V+L D LV M L H++H + P V
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 166 AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLA 222
A I L+ + + R +Y DL +L D+ G R+S GL + +G K +
Sbjct: 292 AAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK 254
Y PE ++ R ++ G +L ++++G+
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L V+H +V+LI G + L+ +Y+ L L +++ + M +Y+A+
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGI--FMEDTACFYLAE 129
Query: 172 ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTNLAYT 224
AL H + Q +Y DL ++ + G +L+ FGL K S DG ++ + Y
Sbjct: 130 ISMALGHLH-QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 225 PPEFL-RTG--RVIPESVIYSYGTVLLDLLSGKHIPP 258
PE L R+G R + +S G ++ D+L+G PP
Sbjct: 189 APEILMRSGHNRAVD---WWSLGALMYDMLTGA--PP 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 24/198 (12%)
Query: 78 VYRGRLK----NNRLVAIKRF-----SRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA 128
V RGRLK VAIK RQ +F++EA+ +G H ++ L G
Sbjct: 32 VCRGRLKAPGKKESCVAIKTLKGGYTERQR----REFLSEASIMGQFEHPNIIRLEGVVT 87
Query: 129 EGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLN 188
+++ ++M N L L D Q ++ V + IA + + ++ ++ DL
Sbjct: 88 NSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-VGMLRGIASGMRYL-AEMSYVHRDLA 145
Query: 189 AYRVLFDEDGDPRLSSFGLMK----NSRDGKSYST-----NLAYTPPEFLRTGRVIPESV 239
A +L + + ++S FGL + NS D S+ + +T PE + + S
Sbjct: 146 ARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASD 205
Query: 240 IYSYGTVLLDLLSGKHIP 257
+SYG V+ +++S P
Sbjct: 206 AWSYGIVMWEVMSFGERP 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+ E L V + +V+L D LV M L H++H + P V
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 166 AYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLA 222
A I L+ + + R +Y DL +L D+ G R+S GL + +G K +
Sbjct: 292 AAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGK 254
Y PE ++ R ++ G +L ++++G+
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 66 IVSESGDKAPNVVYRGRLKNNR-LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
I+ E GD VY+ + K L A K +S + ++ E L + H +V L+
Sbjct: 16 IIGELGDFGK--VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRK 182
+ ++ ++ + + ++ PL E +++V Q LD N N+
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELER-PLT-ESQIQVV--CKQTLDALNYLHDNKI 129
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDGKSYSTNLAYTP----PEFL--RTGRVI 235
++ DL A +LF DGD +L+ FG+ KN+R + TP PE + T +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 236 P---ESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
P ++ ++S G L+++ + PP H L+ +R
Sbjct: 190 PYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 221
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 108 EAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAY 167
E + L +RH ++ L DE ++V +Y N+ L ++ DK E R R
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMS-EQEAR-RFFQ 120
Query: 168 YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YT 224
I A+++C+ +++ ++ DL +L DE + +++ FGL DG T+ Y
Sbjct: 121 QIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 179
Query: 225 PPEFLRTGRVI--PESVIYSYGTVLLDLL 251
PE + +G++ PE ++S G +L +L
Sbjct: 180 APEVI-SGKLYAGPEVDVWSCGVILYVML 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 108 EAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAY 167
E + L +RH ++ L DE ++V +Y N+ L ++ DK E R R
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMS-EQEAR-RFFQ 119
Query: 168 YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YT 224
I A+++C+ +++ ++ DL +L DE + +++ FGL DG T+ Y
Sbjct: 120 QIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 178
Query: 225 PPEFLRTGRVI--PESVIYSYGTVLLDLL 251
PE + +G++ PE ++S G +L +L
Sbjct: 179 APEVI-SGKLYAGPEVDVWSCGVILYVML 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 108 EAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAY 167
E + L +RH ++ L DE ++V +Y N+ L ++ DK E R R
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMS-EQEAR-RFFQ 110
Query: 168 YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YT 224
I A+++C+ +++ ++ DL +L DE + +++ FGL DG T+ Y
Sbjct: 111 QIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 169
Query: 225 PPEFLRTGRVI--PESVIYSYGTVLLDLL 251
PE + +G++ PE ++S G +L +L
Sbjct: 170 APEVI-SGKLYAGPEVDVWSCGVILYVML 197
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 108 EAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAY 167
E + L +RH ++ L DE ++V +Y N+ L ++ DK E R R
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMS-EQEAR-RFFQ 114
Query: 168 YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YT 224
I A+++C+ +++ ++ DL +L DE + +++ FGL DG T+ Y
Sbjct: 115 QIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 173
Query: 225 PPEFLRTGRVI--PESVIYSYGTVLLDLL 251
PE + +G++ PE ++S G +L +L
Sbjct: 174 APEVI-SGKLYAGPEVDVWSCGVILYVML 201
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ 171
L V+H +V+LI G + L+ +Y+ L L +++ + M +Y+A+
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGI--FMEDTACFYLAE 129
Query: 172 ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNS-RDG---KSYSTNLAYT 224
AL H + Q +Y DL ++ + G +L+ FGL K S DG + + Y
Sbjct: 130 ISMALGHLH-QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYM 188
Query: 225 PPEFL-RTG--RVIPESVIYSYGTVLLDLLSGKHIPP 258
PE L R+G R + +S G ++ D+L+G PP
Sbjct: 189 APEILMRSGHNRAVD---WWSLGALMYDMLTGA--PP 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 21/184 (11%)
Query: 84 KNNRLVAIKRFSRQ--------SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
K +R+ A++ ++ W + V E A H LV L C
Sbjct: 75 KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTESRLFF 130
Query: 136 VAQYMPNDTLSKHLFHWDKQ-PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V +Y+ L +FH +Q LP E + I+ AL++ + + +Y DL VL
Sbjct: 131 VIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLL 186
Query: 195 DEDGDPRLSSFGLMKNS-RDGKSYSTNLA---YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
D +G +L+ +G+ K R G + ST Y PE LR ++ G ++ ++
Sbjct: 187 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 246
Query: 251 LSGK 254
++G+
Sbjct: 247 MAGR 250
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 89 VAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145
VA+K +RQ S + E L RH ++ L + + +V +Y+ L
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 146 SKHLFHWDKQPLPWEMRVRVAYY-IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSS 204
++ K EM R + I A+D+C+ ++ ++ DL VL D + +++
Sbjct: 99 FDYIC---KHGRVEEMEARRLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIAD 154
Query: 205 FGLMKNSRDGKSYSTNLA---YTPPEFLRTGRVI--PESVIYSYGTVLLDLLSG------ 253
FGL DG+ + Y PE + +GR+ PE I+S G +L LL G
Sbjct: 155 FGLSNMMSDGEFLRDSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
Query: 254 KHIP 257
+H+P
Sbjct: 214 EHVP 217
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 84 KNNRLVAIKRFSRQ--SWPDPHQFVT-EAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYM 140
K + VA+K SRQ D H V E + L +RH ++ L + ++V +Y
Sbjct: 32 KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA 91
Query: 141 PNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200
+ + +K+ + + R I A+++C+ +++ ++ DL +L D++ +
Sbjct: 92 GGELFD---YIVEKKRMTEDEGRRFFQQIICAIEYCH-RHKIVHRDLKPENLLLDDNLNV 147
Query: 201 RLSSFGLMKNSRDGKSYSTNLA---YTPPEFLRTGRVI--PESVIYSYGTVLLDLLSGK 254
+++ FGL DG T+ Y PE + G++ PE ++S G VL +L G+
Sbjct: 148 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 101 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 154
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + + PE L + S ++S+G VL +L +
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 215 EKSKSPPAEFMRMI 228
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 24/266 (9%)
Query: 71 GDKAPNVVYRGRL-KNNRLVAIKRF-------SRQSWPDPHQFVTEAAGLGNVRHKRLVN 122
G +V++GRL K+ +VAIK + +F E + N+ H +V
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 123 LIGCCAEGDERLLVAQYMPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNR 181
L G + +V +++P L L DK P+ W +++R+ IA +++ +QN
Sbjct: 88 LYGLMH--NPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 182 KLYH-DLNAYRVL---FDEDGD--PRLSSFGLMKNSRDGKS-YSTNLAYTPPEFL--RTG 232
+ H DL + + DE+ +++ FG + S S N + PE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEE 203
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292
++ YS+ +L +L+G+ ++ I+ N ++ + L + +L
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEGLRPTIPEDCPPRLRN 261
Query: 293 LASKCLQYEAKDRPDVKFLLSAVAPL 318
+ C + K RP +++ ++ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 112/265 (42%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIA 170
+V L+G ++G L+V + M + L +L + P + +++A IA
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYT 224
+ + N++ + ++ +L A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE L+ G S ++S+G VL ++ S P +G + ++ ++G Y +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-------YQGLSNEQVLKFVMDGGYLD 252
Query: 285 ED---ATQLVELASKCLQYEAKDRP 306
+ ++ +L C Q+ RP
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRP 277
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+TE L R+ + + CC + +RL N +FH K E R R
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG--GDLMFHIQKSRRFDEARAR- 127
Query: 166 AYYIAQALDHCNSQNRK--LYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKSYST 219
+Y A+ + + K +Y DL VL D +G +L+ FG+ K N ++
Sbjct: 128 -FYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 220 NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIP--PSHALDVIRGKNLLLLMDSS 277
Y PE L+ P ++ G +L ++L G H P + D+ +L D
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG-HAPFEAENEDDLFEA----ILNDEV 241
Query: 278 LEGQYANEDATQLVE 292
+ + +EDAT +++
Sbjct: 242 VYPTWLHEDATGILK 256
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 112/265 (42%), Gaps = 32/265 (12%)
Query: 66 IVSESGDKAPNVVYRGRLKN------NRLVAIKRFSRQ-SWPDPHQFVTEAAGLGNVRHK 118
++ E G + +VY G ++ VA+K + S + +F+ EA+ +
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 119 RLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHW--------DKQPLPWEMRVRVAYYIA 170
+V L+G ++G L+V + M + L +L + P + +++A IA
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 171 QALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN------SRDGKSYSTNLAYT 224
+ + N++ + ++ +L A + D ++ FG+ ++ R G + +
Sbjct: 142 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYAN 284
PE L+ G S ++S+G VL ++ S P +G + ++ ++G Y +
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-------YQGLSNEQVLKFVMDGGYLD 253
Query: 285 ED---ATQLVELASKCLQYEAKDRP 306
+ ++ +L C Q+ RP
Sbjct: 254 QPDNCPERVTDLMRMCWQFNPNMRP 278
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFH--------WDKQPLPWEMRVRVAY 167
+H+ +VNL+G C G L++ +Y L L D +PL + +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 168 YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------L 221
+AQ + S+N ++ D+ A VL ++ FGL ++ + +Y +
Sbjct: 160 QVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ PE + +S ++SYG +L ++ S
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIK----RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
G +VY GR L N +AIK R SR S P E A +++HK +V +G
Sbjct: 31 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP----LHEEIALHKHLKHKNIVQYLG 86
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRKL 183
+E + + +P +LS L PL + + +Y Q L+ N+ +
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLK-DNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 184 YHDLNAYRVLFDE-DGDPRLSSFGLMKN----SRDGKSYSTNLAYTPPEFLRTG-RVIPE 237
+ D+ VL + G ++S FG K + ++++ L Y PE + G R +
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 238 SV-IYSYGTVLLDLLSGKHIPPSHAL 262
+ I+S G ++++ +GK PP + L
Sbjct: 205 AADIWSLGCTIIEMATGK--PPFYEL 228
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 42 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ +L +L + + +
Sbjct: 102 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVK 155
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K Y + + + PE L + S ++S+G VL +L +
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 216 EKSKSPPAEFMRMI 229
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 21/184 (11%)
Query: 84 KNNRLVAIKRFSRQ--------SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
K +R+ A+K ++ W + V E A H LV L C
Sbjct: 43 KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTESRLFF 98
Query: 136 VAQYMPNDTLSKHLFHWDKQ-PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V +Y+ L +FH +Q LP E + I+ AL++ + + +Y DL VL
Sbjct: 99 VIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLL 154
Query: 195 DEDGDPRLSSFGLMKNS-RDGKSYSTNLA---YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
D +G +L+ +G+ K R G + S Y PE LR ++ G ++ ++
Sbjct: 155 DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 214
Query: 251 LSGK 254
++G+
Sbjct: 215 MAGR 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFH--------WDKQPLPWEMRVRVAY 167
+H+ +VNL+G C G L++ +Y L L D +PL + +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 168 YIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------L 221
+AQ + S+N ++ D+ A VL ++ FGL ++ + +Y +
Sbjct: 168 QVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 222 AYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ PE + +S ++SYG +L ++ S
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 22/206 (10%)
Query: 71 GDKAPNVVYRGR-LKNNRLVAIK----RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIG 125
G +VY GR L N +AIK R SR S P E A +++HK +V +G
Sbjct: 17 GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP----LHEEIALHKHLKHKNIVQYLG 72
Query: 126 CCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRKL 183
+E + + +P +LS L PL + + +Y Q L+ N+ +
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLK-DNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 184 YHDLNAYRVLFDE-DGDPRLSSFGLMKN----SRDGKSYSTNLAYTPPEFLRTG-RVIPE 237
+ D+ VL + G ++S FG K + ++++ L Y PE + G R +
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 238 SV-IYSYGTVLLDLLSGKHIPPSHAL 262
+ I+S G ++++ +GK PP + L
Sbjct: 191 AADIWSLGCTIIEMATGK--PPFYEL 214
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 108 EAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAY 167
EA ++H ++ L G C + LV ++ L++ L + +P ++ V A
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAV 112
Query: 168 YIAQALDHCNSQN--RKLYHDLNAYRVLF---DEDGDP-----RLSSFGLMKNSRDGKSY 217
IA+ +++ + + ++ DL + +L E+GD +++ FGL +
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM 172
Query: 218 STNLAYT--PPEFLRTGRVIPESVIYSYGTVLLDLLSGK 254
S AY PE +R S ++SYG +L +LL+G+
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 24/266 (9%)
Query: 71 GDKAPNVVYRGRL-KNNRLVAIKRF-------SRQSWPDPHQFVTEAAGLGNVRHKRLVN 122
G +V++GRL K+ +VAIK + +F E + N+ H +V
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 123 LIGCCAEGDERLLVAQYMPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNR 181
L G + +V +++P L L DK P+ W +++R+ IA +++ +QN
Sbjct: 88 LYGLMH--NPPRMVMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 182 KLYH-DLNAYRVL---FDEDGD--PRLSSFGLMKNSRDGKS-YSTNLAYTPPEFL--RTG 232
+ H DL + + DE+ +++ F L + S S N + PE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEE 203
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVE 292
++ YS+ +L +L+G+ ++ I+ N ++ + L + +L
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEGLRPTIPEDCPPRLRN 261
Query: 293 LASKCLQYEAKDRPDVKFLLSAVAPL 318
+ C + K RP +++ ++ L
Sbjct: 262 VIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 21/184 (11%)
Query: 84 KNNRLVAIKRFSRQ--------SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
K +R+ A+K ++ W + V E A H LV L C
Sbjct: 28 KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTESRLFF 83
Query: 136 VAQYMPNDTLSKHLFHWDKQ-PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V +Y+ L +FH +Q LP E + I+ AL++ + + +Y DL VL
Sbjct: 84 VIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLL 139
Query: 195 DEDGDPRLSSFGLMKNS-RDGKSYSTNLA---YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
D +G +L+ +G+ K R G + S Y PE LR ++ G ++ ++
Sbjct: 140 DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 199
Query: 251 LSGK 254
++G+
Sbjct: 200 MAGR 203
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 26/212 (12%)
Query: 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRL 202
D K+++ +P E+ ++ +AL+H + ++ D+ +L D G+ +L
Sbjct: 108 DKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL 167
Query: 203 SSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIP---------ESVIYSYGTVLLDLLSG 253
FG+ D + + + P ++ R+ P S ++S G L +L +G
Sbjct: 168 CDFGISGQLVDSIAKTRDAGCRP--YMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
Query: 254 KHIPPS------HALDVIRGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPD 307
+ P V++G L E + + + CL + RP
Sbjct: 226 RFPYPKWNSVFDQLTQVVKGDP------PQLSNSEEREFSPSFINFVNLCLTKDESKRPK 279
Query: 308 VKFLLSAVAPL---QKQTEVASHVLMGLSKAP 336
K LL L ++ EVA +V L + P
Sbjct: 280 YKELLKHPFILMYEERAVEVACYVCKILDQMP 311
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 21/184 (11%)
Query: 84 KNNRLVAIKRFSRQ--------SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLL 135
K +R+ A+K ++ W + V E A H LV L C
Sbjct: 32 KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTESRLFF 87
Query: 136 VAQYMPNDTLSKHLFHWDKQ-PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
V +Y+ L +FH +Q LP E + I+ AL++ + + +Y DL VL
Sbjct: 88 VIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLL 143
Query: 195 DEDGDPRLSSFGLMKNS-RDGKSYSTNLA---YTPPEFLRTGRVIPESVIYSYGTVLLDL 250
D +G +L+ +G+ K R G + S Y PE LR ++ G ++ ++
Sbjct: 144 DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203
Query: 251 LSGK 254
++G+
Sbjct: 204 MAGR 207
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 105/258 (40%), Gaps = 30/258 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 72 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 132 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 185
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245
Query: 253 -GKHIPPSHALDVI----RGKNLLLLMDSSLE--GQYANEDAT--QLVELASKCLQYEAK 303
PP+ + +I +G+ ++ + L+ G+ D ++ + ++C
Sbjct: 246 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 305
Query: 304 DRPDVKFLLSAVAPLQKQ 321
RP + L V ++ Q
Sbjct: 306 QRPSFRDLALRVDQIRDQ 323
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YTP 225
I A+ +C+ Q R ++ DL A +L D D + +++ FG G T Y
Sbjct: 120 IVSAVQYCH-QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAA 178
Query: 226 PEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 105/258 (40%), Gaps = 30/258 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 39 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 99 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 152
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212
Query: 253 -GKHIPPSHALDVI----RGKNLLLLMDSSLE--GQYANEDAT--QLVELASKCLQYEAK 303
PP+ + +I +G+ ++ + L+ G+ D ++ + ++C
Sbjct: 213 EKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 272
Query: 304 DRPDVKFLLSAVAPLQKQ 321
RP + L V ++ Q
Sbjct: 273 QRPSFRDLALRVDQIRDQ 290
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 47 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 107 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 160
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 221 EKSKSPPAEFMRMI 234
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 45 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 105 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 158
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 219 EKSKSPPAEFMRMI 232
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 40 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 100 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 153
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 214 EKSKSPPAEFMRMI 227
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 101 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 154
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 215 EKSKSPPAEFMRMI 228
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 46 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 106 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 159
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 220 EKSKSPPAEFMRMI 233
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 101 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 154
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 215 EKSKSPPAEFMRMI 228
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 48 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 108 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 161
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 221
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 222 EKSKSPPAEFMRMI 235
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 104 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 157
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 218 EKSKSPPAEFMRMI 231
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 19/178 (10%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 119 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 172
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 19/178 (10%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L KH D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 119 RDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 172
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 30/149 (20%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAA--GLGNVRHKRLVNLIGCCAEGDER-- 133
VY+G L + R VA+K FS + + F+ E + + H + I GDER
Sbjct: 29 VYKGSL-DERPVAVKVFS---FANRQNFINEKNIYRVPLMEHDNIARFI----VGDERVT 80
Query: 134 -------LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH- 185
LLV +Y PN +L K+L W R+A+ + + L + +++ + H
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 186 -------DLNAYRVLFDEDGDPRLSSFGL 207
DLN+ VL DG +S FGL
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 155 QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
Q +P ++ ++A I +AL+H +S+ ++ D+ VL + G ++ FG+ D
Sbjct: 148 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207
Query: 215 KSYSTNLAYTPPEFLRTGRVIPE---------SVIYSYGTVLLDLLSGKHIPPSHALDVI 265
+ + + P ++ R+ PE S I+S G +++L + S
Sbjct: 208 VAKTIDAGCKP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 265
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL-----QK 320
+ K ++ L A++ + + V+ S+CL+ +K+RP L+ P K
Sbjct: 266 QLKQVVEEPSPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ--HPFFTLHESK 320
Query: 321 QTEVASHV 328
T+VAS V
Sbjct: 321 GTDVASFV 328
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 44/252 (17%)
Query: 89 VAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
VA+K + P + ++E L V H ++ L G C++ LL+ +Y +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 148 HLF----------------------HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
L H D++ L + A+ I+Q + + ++ + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMKLVHR 174
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESV 239
DL A +L E ++S FGL ++ + SY + + E L +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 240 IYSYGTVLLDL--LSGK---HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294
++S+G +L ++ L G IPP ++++ + + D+ E Y L
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY---------RLM 285
Query: 295 SKCLQYEAKDRP 306
+C + E RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 126 CCAEGDERLL-VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK-- 182
C + E L V +Y+ L H+ K L R +Y A+ + + K
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-----RATFYAAEIILGLQFLHSKGI 140
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPES 238
+Y DL +L D+DG +++ FG+ K + G + + TP PE L +
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSV 200
Query: 239 VIYSYGTVLLDLLSGKHIPPSHALD 263
+S+G +L ++L G+ P H D
Sbjct: 201 DWWSFGVLLYEMLIGQ--SPFHGQD 223
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLAYTP 225
I A+ +C+ Q R ++ DL A +L D D + +++ FG G ++ Y
Sbjct: 123 IVSAVQYCH-QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 226 PEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 126 CCAEGDERLL-VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRK-- 182
C + E L V +Y+ L H+ K L R +Y A+ + + K
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-----RATFYAAEIILGLQFLHSKGI 139
Query: 183 LYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTP----PEFLRTGRVIPES 238
+Y DL +L D+DG +++ FG+ K + G + + TP PE L +
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSV 199
Query: 239 VIYSYGTVLLDLLSGKHIPPSHALD 263
+S+G +L ++L G+ P H D
Sbjct: 200 DWWSFGVLLYEMLIGQ--SPFHGQD 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
YY+ Q + C +NR ++ DL + +ED + ++ FGL K DG K+
Sbjct: 125 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 184
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E ++S G ++ LL GK P ++ L + +
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIP 241
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
++ N A L++ K LQ + RP + LL+
Sbjct: 242 KHINPVAASLIQ---KMLQTDPTARPTINELLN 271
>pdb|2BUG|A Chain A, Solution Structure Of The Tpr Domain From Protein
Phosphatase 5 In Complex With Hsp90 Derived Peptide
Length = 140
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 400 FRDKDFKNAIEYYSKLVSMMSVPSGTVFV-RRALSYLMIEQAELALRDAMQAQVCLPEWP 458
F+ KD++NAI++YS+ + + PS ++ R+L+YL E AL DA +A ++
Sbjct: 32 FKAKDYENAIKFYSQAIELN--PSNAIYYGNRSLAYLRTECYGYALNDATRAIELDKKYI 89
Query: 459 TAFYMQALALNKLG 472
+Y +A + LG
Sbjct: 90 KGYYRRAASNMALG 103
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
YY+ Q + C +NR ++ DL + +ED + ++ FGL K DG K+
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E ++S G ++ LL GK P ++ L + +
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIP 237
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
++ N A L++ K LQ + RP + LL+
Sbjct: 238 KHINPVAASLIQ---KMLQTDPTARPTINELLN 267
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 14/190 (7%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMPNDTL 145
+VA+K+ + F E L +++H +V G C R L+ +++P +L
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205
++L K+ + ++ I + +++ ++ R ++ DL +L + + ++ F
Sbjct: 104 REYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDF 161
Query: 206 GLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS---GKH 255
GL K K + + + PE L + S ++S+G VL +L +
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 256 IPPSHALDVI 265
PP+ + +I
Sbjct: 222 SPPAEFMRMI 231
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
YY+ Q + C +NR ++ DL + +ED + ++ FGL K DG K+
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E ++S G ++ LL GK P ++ L + +
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIP 237
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
++ N A L++ K LQ + RP + LL+
Sbjct: 238 KHINPVAASLIQ---KMLQTDPTARPTINELLN 267
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 89 VAIKRFSRQ---SWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTL 145
VA+K +RQ S + E L RH ++ L + + +V +Y+ L
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 146 SKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSF 205
++ + L + R+ I +D+C+ ++ ++ DL VL D + +++ F
Sbjct: 104 FDYICKNGR--LDEKESRRLFQQILSGVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADF 160
Query: 206 GLMKNSRDGKSYSTNLA---YTPPEFLRTGRVI--PESVIYSYGTVLLDLLSG 253
GL DG+ + Y PE + +GR+ PE I+S G +L LL G
Sbjct: 161 GLSNMMSDGEFLRXSCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5
Length = 166
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 400 FRDKDFKNAIEYYSKLVSMMSVPSGTVFV-RRALSYLMIEQAELALRDAMQAQVCLPEWP 458
F+ KD++NAI++YS+ + + PS ++ R+L+YL E AL DA +A ++
Sbjct: 24 FKAKDYENAIKFYSQAIELN--PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI 81
Query: 459 TAFYMQALALNKLG 472
+Y +A + LG
Sbjct: 82 KGYYRRAASNMALG 95
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 22/194 (11%)
Query: 88 LVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER--LLVAQYMP---- 141
+VA+K+ + F E L +++H +V G C R L+ +Y+P
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 142 NDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPR 201
D L H D L ++ I + +++ ++ R ++ DL +L + + +
Sbjct: 104 RDYLQAHAERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVK 157
Query: 202 LSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-- 252
+ FGL K K + + + PE L + S ++S+G VL +L +
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 253 -GKHIPPSHALDVI 265
PP+ + +I
Sbjct: 218 EKSKSPPAEFMRMI 231
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 29/205 (14%)
Query: 78 VYRGRLKNNRL---VAIKRFSRQSWPDPHQ-FVTEAAGLGNV-RHKRLVNLIGCCAEGDE 132
V + R+K + L AIKR + D H+ F E L + H ++NL+G C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 133 RLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQALDHCNS 178
L +Y P+ L L + L + + A +A+ +D+ S
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-S 159
Query: 179 QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPP------EFLRTG 232
Q + ++ DL A +L E+ +++ FGL SR + Y P E L
Sbjct: 160 QKQFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYS 216
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIP 257
S ++SYG +L +++S P
Sbjct: 217 VYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 21/188 (11%)
Query: 155 QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
Q +P ++ ++A I +AL+H +S+ ++ D+ VL + G ++ FG+ D
Sbjct: 104 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
Query: 215 KSYSTNLAYTPPEFLRTGRVIPE---------SVIYSYGTVLLDLLSGKHIPPSHALDVI 265
+ + P ++ R+ PE S I+S G +++L + S
Sbjct: 164 VAKDIDAGCKP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 221
Query: 266 RGKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPL-----QK 320
+ K ++ L A++ + + V+ S+CL+ +K+RP L+ P K
Sbjct: 222 QLKQVVEEPSPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ--HPFFTLHESK 276
Query: 321 QTEVASHV 328
T+VAS V
Sbjct: 277 GTDVASFV 284
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 12/186 (6%)
Query: 89 VAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKH 148
VA+K+ + E + + H +V++ GDE +V +++ L+
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 149 LFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLM 208
+ H E V + +AL + ++Q ++ D+ + +L DG +LS FG
Sbjct: 133 VTHTRMNE---EQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFC 188
Query: 209 KNSRDGKSYSTNLAYTP----PEFLRTGRVIPESVIYSYGTVLLDLLSGK----HIPPSH 260
L TP PE + E I+S G ++++++ G+ + PP
Sbjct: 189 AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ 248
Query: 261 ALDVIR 266
A+ IR
Sbjct: 249 AMRRIR 254
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 45/168 (26%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQY------------------------MPNDTLS-KHLF 150
+H+ +VNL+G C G L++ +Y + N TLS + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 151 HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210
H+ Q +AQ + S+N ++ D+ A VL ++ FGL ++
Sbjct: 168 HFSSQ-------------VAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 211 SRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ +Y + + PE + +S ++SYG +L ++ S
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 400 FRDKDFKNAIEYYSKLVSMMSVPSGTVFV-RRALSYLMIEQAELALRDAMQAQVCLPEWP 458
F+ KD++NAI++YS+ + + PS ++ R+L+YL E AL DA +A ++
Sbjct: 17 FKAKDYENAIKFYSQAIELN--PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI 74
Query: 459 TAFYMQALALNKLG 472
+Y +A + LG
Sbjct: 75 KGYYRRAASNMALG 88
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Query: 105 FVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK---HLFHWDKQP---LP 158
F E + +++++ + G DE ++ +YM ND++ K + F DK +P
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 159 WEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYS 218
++ + + + + +++ + D+ +L D++G +LS FG + D K
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG 209
Query: 219 TNLAY--TPPEFL 229
+ Y PPEF
Sbjct: 210 SRGTYEFMPPEFF 222
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 29/205 (14%)
Query: 78 VYRGRLKNNRL---VAIKRFSRQSWPDPHQ-FVTEAAGLGNV-RHKRLVNLIGCCAEGDE 132
V + R+K + L AIKR + D H+ F E L + H ++NL+G C
Sbjct: 31 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 90
Query: 133 RLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQALDHCNS 178
L +Y P+ L L + L + + A +A+ +D+ S
Sbjct: 91 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-S 149
Query: 179 QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPP------EFLRTG 232
Q + ++ DL A +L E+ +++ FGL SR + Y P E L
Sbjct: 150 QKQFIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYS 206
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIP 257
S ++SYG +L +++S P
Sbjct: 207 VYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
YY+ Q + C +NR ++ DL + +ED + ++ FGL K DG K
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E ++S G ++ LL GK P ++ L + +
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIP 235
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
++ N A L++ K LQ + RP + LL+
Sbjct: 236 KHINPVAASLIQ---KMLQTDPTARPTINELLN 265
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
YY+ Q + C +NR ++ DL + +ED + ++ FGL K DG K
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E ++S G ++ LL GK P ++ L + +
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIP 261
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
++ N A L++ K LQ + RP + LL+
Sbjct: 262 KHINPVAASLIQ---KMLQTDPTARPTINELLN 291
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
YY+ Q + C +NR ++ DL + +ED + ++ FGL K DG K
Sbjct: 143 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E ++S G ++ LL GK P ++ L + +
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIP 259
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
++ N A L++ K LQ + RP + LL+
Sbjct: 260 KHINPVAASLIQ---KMLQTDPTARPTINELLN 289
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 TLSKHLFHWDKQPLPW----------EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
LS +L + +P+ E + ++ +A+ ++ S+ + ++ DL A +L
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR-KXIHRDLAARNIL 176
Query: 194 FDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVL 247
E ++ FGL ++ Y L + PE + +S ++S+G +L
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 248 LDLLS 252
++ S
Sbjct: 237 WEIFS 241
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YTP 225
I A+ +C+ Q ++ DL A +L D D + +++ FG G T Y
Sbjct: 115 IVSAVQYCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 173
Query: 226 PEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 83 LKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGC----CAEGDERLL 135
L+++R VA+K DP +F EA + H +V + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +Y+ TL + + H + P+ + + V QAL+ + QN ++ D+ ++
Sbjct: 94 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMIS 150
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLA-------YTPPEFLRTGRVIPESVIYSYGTVLL 248
++ FG+ + D + T A Y PE R V S +YS G VL
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 249 DLLSGKHIPP 258
++L+G+ PP
Sbjct: 211 EVLTGE--PP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 83 LKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGC----CAEGDERLL 135
L+++R VA+K DP +F EA + H +V + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +Y+ TL + + H + P+ + + V QAL+ + QN ++ D+ ++
Sbjct: 94 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMIS 150
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLA-------YTPPEFLRTGRVIPESVIYSYGTVLL 248
++ FG+ + D + T A Y PE R V S +YS G VL
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 249 DLLSGKHIPP 258
++L+G+ PP
Sbjct: 211 EVLTGE--PP 218
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Query: 89 VAIK--RFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDER-----LLVAQYMP 141
VA+K + S + +F++EAA + + H ++ L+G C E + +++ +M
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 142 NDTLSKHLFH--WDKQP--LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
L +L + + P +P + ++ IA +++ +++N L+ DL A + +D
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF-LHRDLAARNCMLRDD 183
Query: 198 GDPRLSSFGLMKNSRDGKSY 217
++ FGL K G Y
Sbjct: 184 MTVCVADFGLSKKIYSGDYY 203
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YTP 225
I A+ +C+ Q ++ DL A +L D D + +++ FG G T Y
Sbjct: 122 IVSAVQYCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 226 PEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YTP 225
I A+ +C+ Q ++ DL A +L D D + +++ FG G T Y
Sbjct: 122 IVSAVQYCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 226 PEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLA---YTP 225
I A+ +C+ Q ++ DL A +L D D + +++ FG G T Y
Sbjct: 122 IVSAVQYCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 226 PEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 27/164 (16%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL------FHWDKQPLPWEM---- 161
LGN H +VNL+G C G L++ +Y L L F K P M
Sbjct: 99 LGN--HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS-PAIMEDDE 155
Query: 162 -------RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
+ +Y +A+ + S+N ++ DL A +L ++ FGL ++ ++
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 215 KSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+Y + + PE + ES ++SYG L +L S
Sbjct: 215 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQY----------------MPNDTLS-----KHLFHWDK 154
+H+ +VNL+G C G L++ +Y M +L+ + L D
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 155 QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
+PL + + +AQ + S+N ++ D+ A VL ++ FGL ++ +
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 215 KSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+Y + + PE + +S ++SYG +L ++ S
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 TLSKHLFHWDKQPLPW----------EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
LS +L + +P+ E + ++ +A+ ++ S+ + ++ DL A +L
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR-KXIHRDLAARNIL 176
Query: 194 FDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVL 247
E ++ FGL ++ Y L + PE + +S ++S+G +L
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 248 LDLLS 252
++ S
Sbjct: 237 WEIFS 241
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 66/157 (42%), Gaps = 21/157 (13%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQYM--------------PNDTLSKHLFHWDKQPLPWEM 161
+H+ +VNL+G C G L++ +Y P S + H ++ L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 162 RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN- 220
+ + +AQ + S+N ++ D+ A VL ++ FGL ++ + +Y
Sbjct: 168 LLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 221 -----LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ + PE + +S ++SYG +L ++ S
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 27/164 (16%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL------FHWDKQPLPWEM---- 161
LGN H +VNL+G C G L++ +Y L L F K P M
Sbjct: 83 LGN--HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS-PAIMEDDE 139
Query: 162 -------RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
+ +Y +A+ + S+N ++ DL A +L ++ FGL ++ ++
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 215 KSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+Y + + PE + ES ++SYG L +L S
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 83 LKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGC----CAEGDERLL 135
L+++R VA+K DP +F EA + H +V + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +Y+ TL + + H + P+ + + V QAL+ + QN ++ D+ +L
Sbjct: 94 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANILIS 150
Query: 196 EDGDPRLSSFGLMKNSRD-GKSYSTNLA------YTPPEFLRTGRVIPESVIYSYGTVLL 248
++ FG+ + D G S A Y PE R V S +YS G VL
Sbjct: 151 ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 249 DLLSGKHIPP 258
++L+G+ PP
Sbjct: 211 EVLTGE--PP 218
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 27/164 (16%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL------FHWDKQPLPWEM---- 161
LGN H +VNL+G C G L++ +Y L L F K P M
Sbjct: 101 LGN--HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS-PAIMEDDE 157
Query: 162 -------RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
+ +Y +A+ + S+N ++ DL A +L ++ FGL ++ ++
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 215 KSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+Y + + PE + ES ++SYG L +L S
Sbjct: 217 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 79 YRGRLKNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGC------CAEG 130
Y RL+ VA+K+ SR QS + E L +++H+ ++ L+ +
Sbjct: 48 YDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 105
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
E LV M D L+ + Q L E + Y + + L + +S ++ DL
Sbjct: 106 SEVYLVTTLMGAD-LNNIV---KSQALSDEHVQFLVYQLLRGLKYIHSAG-IIHRDLKPS 160
Query: 191 RVLFDEDGDPRLSSFGLMKNS-RDGKSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLL 248
V +ED + R+ FGL + + + Y Y PE + ++V I+S G ++
Sbjct: 161 NVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 249 DLLSGKHIPP 258
+LL GK + P
Sbjct: 221 ELLQGKALFP 230
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 27/164 (16%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL------FHWDKQPLPWEM---- 161
LGN H +VNL+G C G L++ +Y L L F K P M
Sbjct: 106 LGN--HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS-PAIMEDDE 162
Query: 162 -------RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
+ +Y +A+ + S+N ++ DL A +L ++ FGL ++ ++
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 215 KSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+Y + + PE + ES ++SYG L +L S
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 29/205 (14%)
Query: 78 VYRGRLKNNRL---VAIKRFSRQSWPDPHQ-FVTEAAGLGNV-RHKRLVNLIGCCAEGDE 132
V + R+K + L AIKR + D H+ F E L + H ++NL+G C
Sbjct: 38 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 97
Query: 133 RLLVAQYMPNDTLSKHL--------------FHWDKQPLPWEMRVRVAYYIAQALDHCNS 178
L +Y P+ L L + L + + A +A+ +D+ S
Sbjct: 98 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL-S 156
Query: 179 QNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPP------EFLRTG 232
Q + ++ +L A +L E+ +++ FGL SR + Y P E L
Sbjct: 157 QKQFIHRNLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYS 213
Query: 233 RVIPESVIYSYGTVLLDLLSGKHIP 257
S ++SYG +L +++S P
Sbjct: 214 VYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 27/164 (16%)
Query: 112 LGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL------FHWDKQPLPWEM---- 161
LGN H +VNL+G C G L++ +Y L L F K P M
Sbjct: 106 LGN--HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS-PAIMEDDE 162
Query: 162 -------RVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
+ +Y +A+ + S+N ++ DL A +L ++ FGL ++ ++
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 215 KSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+Y + + PE + ES ++SYG L +L S
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 22/188 (11%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH--CNS----------QNRKLYH-DLNAY 190
LS +L + +P+++ Y L+H C S +RK H DL A
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 214
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYG 244
+L E ++ FGL ++ Y L + PE + +S ++S+G
Sbjct: 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 274
Query: 245 TVLLDLLS 252
+L ++ S
Sbjct: 275 VLLWEIFS 282
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 99/252 (39%), Gaps = 44/252 (17%)
Query: 89 VAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
VA+K + P + ++E L V H ++ L G C++ LL+ +Y +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 148 HLF----------------------HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
L H D++ L + A+ I+Q + + ++ + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMKLVHR 174
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESV 239
DL A +L E ++S FGL ++ + S + + E L +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 240 IYSYGTVLLDL--LSGK---HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294
++S+G +L ++ L G IPP ++++ + + D+ E Y L
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY---------RLM 285
Query: 295 SKCLQYEAKDRP 306
+C + E RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---SYSTNLAYTP 225
I A+ +C+ Q ++ DL A +L D D + +++ FG G ++ Y
Sbjct: 122 IVSAVQYCH-QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 226 PEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---SYSTNLAYTP 225
I A+ +C+ Q ++ DL A +L D D + +++ FG G + + Y
Sbjct: 122 IVSAVQYCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAA 180
Query: 226 PEFLRTGRVI-PESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 83 LKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGC----CAEGDERLL 135
L+ +R VA+K DP +F EA + H +V + G +
Sbjct: 34 LRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYI 93
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +Y+ TL + + H + P+ + + V QAL+ + QN ++ D+ ++
Sbjct: 94 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMIS 150
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLA-------YTPPEFLRTGRVIPESVIYSYGTVLL 248
++ FG+ + D + T A Y PE R V S +YS G VL
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 249 DLLSGKHIPP 258
++L+G+ PP
Sbjct: 211 EVLTGE--PP 218
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 22/188 (11%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH--CNS----------QNRKLYH-DLNAY 190
LS +L + +P+++ Y L+H C S +RK H DL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYG 244
+L E ++ FGL ++ Y L + PE + +S ++S+G
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 245 TVLLDLLS 252
+L ++ S
Sbjct: 238 VLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 22/188 (11%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH--CNS----------QNRKLYH-DLNAY 190
LS +L + +P+++ Y L+H C S +RK H DL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYG 244
+L E ++ FGL ++ Y L + PE + +S ++S+G
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 245 TVLLDLLS 252
+L ++ S
Sbjct: 229 VLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 22/188 (11%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH--CNS----------QNRKLYH-DLNAY 190
LS +L + +P+++ Y L+H C S +RK H DL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 191 RVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYG 244
+L E ++ FGL ++ Y L + PE + +S ++S+G
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 228
Query: 245 TVLLDLLS 252
+L ++ S
Sbjct: 229 VLLWEIFS 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 45/168 (26%)
Query: 116 RHKRLVNLIGCCAEGDERLLVAQY------------------------MPNDTLS-KHLF 150
+H+ +VNL+G C G L++ +Y + N T S + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 151 HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN 210
H+ Q +AQ + S+N ++ D+ A VL ++ FGL ++
Sbjct: 168 HFSSQ-------------VAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 211 SRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ +Y + + PE + +S ++SYG +L ++ S
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 9/186 (4%)
Query: 79 YRGRLKNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
Y RL+ VA+K+ SR QS + E L +++H+ ++ L+
Sbjct: 48 YDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 105
Query: 137 AQ-YMPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
++ Y+ + L + K Q L E + Y + + L + +S ++ DL V
Sbjct: 106 SEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-IIHRDLKPSNVAV 164
Query: 195 DEDGDPRLSSFGLMKNS-RDGKSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLS 252
+ED + R+ FGL + + + Y Y PE + ++V I+S G ++ +LL
Sbjct: 165 NEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 224
Query: 253 GKHIPP 258
GK + P
Sbjct: 225 GKALFP 230
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK---SYSTNLAYTP 225
I A+ +C+ Q ++ DL A +L D D + +++ FG G ++ Y
Sbjct: 122 IVSAVQYCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 226 PEFLRTGRV-IPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQY 282
PE + + PE ++S G +L L+SG S D G+NL L + L G+Y
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 230
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 88/225 (39%), Gaps = 33/225 (14%)
Query: 117 HKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHL-----------FHWDKQP--------- 156
H+ +VNL+G C L+ +Y L +L ++ Q
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 157 -LPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215
L +E + AY +A+ ++ ++ ++ DL A VL ++ FGL ++
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 216 SYSTN------LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS-GKHIPPSHALDVIRGK 268
+Y + + PE L G +S ++SYG +L ++ S G + P +D
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA---- 282
Query: 269 NLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRPDVKFLLS 313
N L+ + + ++ + C ++++ RP L S
Sbjct: 283 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 327
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 160 EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
+MR A I L+H +++ +Y DL +L DE G R+S GL + K +++
Sbjct: 293 DMRFYAAEIIL-GLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 220 --NLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIP 257
Y PE L+ G S +S G +L LL G H P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 160 EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
+MR A I L+H +++ +Y DL +L DE G R+S GL + K +++
Sbjct: 293 DMRFYAAEIIL-GLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 220 --NLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIP 257
Y PE L+ G S +S G +L LL G H P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSP 390
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 84/188 (44%), Gaps = 24/188 (12%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 144 TLSKHLFHWDKQPLPW------------EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYR 191
LS +L + +P+ E + ++ +A+ ++ S+ + ++ DL A
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR-KXIHRDLAARN 178
Query: 192 VLFDEDGDPRLSSFGLMKN-------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYG 244
+L E ++ FGL ++ R G + L + PE + +S ++S+G
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 245 TVLLDLLS 252
+L ++ S
Sbjct: 238 VLLWEIFS 245
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 160 EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
+MR A I L+H +++ +Y DL +L DE G R+S GL + K +++
Sbjct: 292 DMRFYAAEIIL-GLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 349
Query: 220 --NLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIP 257
Y PE L+ G S +S G +L LL G H P
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSP 389
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 160 EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
+MR A I L+H +++ +Y DL +L DE G R+S GL + K +++
Sbjct: 293 DMRFYAAEIIL-GLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 220 --NLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIP 257
Y PE L+ G S +S G +L LL G H P
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSP 390
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 83 LKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGC----CAEGDERLL 135
L+ +R VA+K DP +F EA + H +V + G +
Sbjct: 34 LRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +Y+ TL + + H + P+ + + V QAL+ + QN ++ D+ ++
Sbjct: 94 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMIS 150
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLA-------YTPPEFLRTGRVIPESVIYSYGTVLL 248
++ FG+ + D + T A Y PE R V S +YS G VL
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 249 DLLSGKHIPP 258
++L+G+ PP
Sbjct: 211 EVLTGE--PP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 83 LKNNRLVAIKRFSRQSWPDPH---QFVTEAAGLGNVRHKRLVNLIGC----CAEGDERLL 135
L+ +R VA+K DP +F EA + H +V + G +
Sbjct: 51 LRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 110
Query: 136 VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFD 195
V +Y+ TL + + H + P+ + + V QAL+ + QN ++ D+ ++
Sbjct: 111 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMIS 167
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNLA-------YTPPEFLRTGRVIPESVIYSYGTVLL 248
++ FG+ + D + T A Y PE R V S +YS G VL
Sbjct: 168 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 227
Query: 249 DLLSGKHIPP 258
++L+G+ PP
Sbjct: 228 EVLTGE--PP 235
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 155 QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG 214
Q +P ++ ++A I +AL+H +S+ ++ D+ VL + G + FG+ D
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 215 KSYSTNLAYTP--------PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIR 266
+ + P PE + G + +S I+S G ++L + S +
Sbjct: 191 VAKDIDAGCKPYXAPERINPELNQKGYSV-KSDIWSLGITXIELAILRFPYDSWGTPFQQ 249
Query: 267 GKNLLLLMDSSLEGQYANEDATQLVELASKCLQYEAKDRP 306
K ++ L A++ + + V+ S+CL+ +K+RP
Sbjct: 250 LKQVVEEPSPQLP---ADKFSAEFVDFTSQCLKKNSKERP 286
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 18/188 (9%)
Query: 77 VVYRGRLKN-NRLVAIKRFSRQSWPDPHQFVTEAAG-----LGNVRHKRLVNLIGCCAEG 130
VY+ R KN N++VAIK+ + + A L + H ++ L+
Sbjct: 25 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIA--QALDHCNSQNRKLYHDLN 188
LV +M D + D + ++ AY + Q L++ + Q+ L+ DL
Sbjct: 85 SNISLVFDFMETDL---EVIIKDNSLVLTPSHIK-AYMLMTLQGLEYLH-QHWILHRDLK 139
Query: 189 AYRVLFDEDGDPRLSSFGLMKN-SRDGKSYSTNLA---YTPPEFLRTGRVIPESV-IYSY 243
+L DE+G +L+ FGL K+ ++Y + Y PE L R+ V +++
Sbjct: 140 PNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAV 199
Query: 244 GTVLLDLL 251
G +L +LL
Sbjct: 200 GCILAELL 207
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 98/252 (38%), Gaps = 44/252 (17%)
Query: 89 VAIKRFSRQSWP-DPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
VA+K + P + ++E L V H ++ L G C++ LL+ +Y +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 148 HLF----------------------HWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYH 185
L H D++ L + A+ I+Q + + ++ ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMSLVHR 174
Query: 186 DLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESV 239
DL A +L E ++S FGL ++ + S + + E L +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 240 IYSYGTVLLDL--LSGK---HIPPSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVELA 294
++S+G +L ++ L G IPP ++++ + + D+ E Y L
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY---------RLM 285
Query: 295 SKCLQYEAKDRP 306
+C + E RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 157 LPWEMRVRVAYYIAQALDHCNS--QNRKLYHDLNAYRVLFDEDGDPRLSSFG-LMKNSRD 213
LP EM +Y+A+ + +S Q ++ D+ +L D +G RL+ FG +K D
Sbjct: 172 LPEEM---ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228
Query: 214 GKSYSTNLAYTP----PEFLRT-----GRVIPESVIYSYGTVLLDLLSGK 254
G S+ TP PE L+ GR PE +S G + ++L G+
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 9/186 (4%)
Query: 79 YRGRLKNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLV 136
Y RL+ VA+K+ SR QS + E L +++H+ ++ L+
Sbjct: 40 YDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 97
Query: 137 AQ-YMPNDTLSKHLFHWDK-QPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
++ Y+ + L + K Q L E + Y + + L + +S ++ DL V
Sbjct: 98 SEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-IIHRDLKPSNVAV 156
Query: 195 DEDGDPRLSSFGLMKNS-RDGKSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLS 252
+ED + R+ FGL + + + Y Y PE + ++V I+S G ++ +LL
Sbjct: 157 NEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ 216
Query: 253 GKHIPP 258
GK + P
Sbjct: 217 GKALFP 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 34/199 (17%)
Query: 71 GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
G A VV + + + + VAIK+ +S + F+ E L V H +V L G C
Sbjct: 18 GRGAFGVVCKAKWRA-KDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHC-----------NSQ 179
+ LV +Y +L L +PLP+ Y A A+ C + Q
Sbjct: 73 NPVCLVMEYAEGGSLYNVLH--GAEPLPY-------YTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 180 NRKLYH-DLNAYRVLFDEDGDP-RLSSFGLMKNSRDGKSYSTN----LAYTPPEFLRTGR 233
+ L H DL +L G ++ FG + D +++ TN A+ PE
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTNNKGSAAWMAPEVFEGSN 180
Query: 234 VIPESVIYSYGTVLLDLLS 252
+ ++S+G +L ++++
Sbjct: 181 YSEKCDVFSWGIILWEVIT 199
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 106 VTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRV 165
+ E L + H ++ E +E +V + LS+ + H+ KQ R
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 166 AYYI--AQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAY 223
Y++ AL+H +S+ R ++ D+ V G +L GL + + + +L
Sbjct: 140 KYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 224 TP----PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLE 279
TP PE + +S I+S G +L ++ + + P + + NL L +
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS--PFYGDKM----NLYSLCKKIEQ 252
Query: 280 GQY----ANEDATQLVELASKCLQYEAKDRPDVKFL 311
Y ++ + +L +L + C+ + + RPDV ++
Sbjct: 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 89 VAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLLVAQYM 140
VA+K+ SR QS + E L +++H+ ++ L+ E ++ LV M
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 109
Query: 141 PND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
D + K Q L + + Y I + L + +S + ++ DL + +ED
Sbjct: 110 GADLNNIVK------SQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDS 162
Query: 199 DPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
+ ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL+G+ +
Sbjct: 163 ELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 257 PP 258
P
Sbjct: 223 FP 224
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 34/199 (17%)
Query: 71 GDKAPNVVYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEG 130
G A VV + + + + VAIK+ +S + F+ E L V H +V L G C
Sbjct: 17 GRGAFGVVCKAKWRA-KDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 131 DERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHC-----------NSQ 179
+ LV +Y +L L +PLP+ Y A A+ C + Q
Sbjct: 72 NPVCLVMEYAEGGSLYNVLH--GAEPLPY-------YTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 180 NRKLYH-DLNAYRVLFDEDGDP-RLSSFGLMKNSRDGKSYSTN----LAYTPPEFLRTGR 233
+ L H DL +L G ++ FG + D +++ TN A+ PE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTNNKGSAAWMAPEVFEGSN 179
Query: 234 VIPESVIYSYGTVLLDLLS 252
+ ++S+G +L ++++
Sbjct: 180 YSEKCDVFSWGIILWEVIT 198
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 144 TLSKHLFHWDKQPLPW--------------EMRVRVAYYIAQALDHCNSQNRKLYHDLNA 189
LS +L + +P+ E + ++ +A+ ++ S+ + ++ DL A
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 178
Query: 190 YRVLFDEDGDPRLSSFGLMKNSRDGKSYSTN------LAYTPPEFLRTGRVIPESVIYSY 243
+L E ++ FGL ++ Y L + PE + +S ++S+
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 244 GTVLLDLLS 252
G +L ++ S
Sbjct: 239 GVLLWEIFS 247
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH--CNS----------QNRKLYH-DLNAY 190
LS +L + +P+++ Y L+H C S +RK H DL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 191 RVLFDEDGDPRLSSFGLMKN-------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSY 243
+L E ++ FGL ++ R G + L + PE + +S ++S+
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 244 GTVLLDLLS 252
G +L ++ S
Sbjct: 237 GVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH--CNS----------QNRKLYH-DLNAY 190
LS +L + +P+++ Y L+H C S +RK H DL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 191 RVLFDEDGDPRLSSFGLMKN-------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSY 243
+L E ++ FGL ++ R G + L + PE + +S ++S+
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 244 GTVLLDLLS 252
G +L ++ S
Sbjct: 228 GVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH--CNS----------QNRKLYH-DLNAY 190
LS +L + +P+++ Y L+H C S +RK H DL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 168
Query: 191 RVLFDEDGDPRLSSFGLMKN-------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSY 243
+L E ++ FGL ++ R G + L + PE + +S ++S+
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 244 GTVLLDLLS 252
G +L ++ S
Sbjct: 228 GVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH--CNS----------QNRKLYH-DLNAY 190
LS +L + +P+++ Y L+H C S +RK H DL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 191 RVLFDEDGDPRLSSFGLMKN-------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSY 243
+L E ++ FGL ++ R G + L + PE + +S ++S+
Sbjct: 178 NILLSEKNVVKICDFGLARDIYKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 244 GTVLLDLLS 252
G +L ++ S
Sbjct: 237 GVLLWEIFS 245
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 100/246 (40%), Gaps = 24/246 (9%)
Query: 89 VAIKRFS-RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT--- 144
VAIKR + + + + E + H +V+ DE LV + + +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRL 202
+ KH+ + +A + + L+ +N +++ D+ A +L EDG ++
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 157
Query: 203 SSFGL---------MKNSRDGKSYSTNLAYTPPEFLRTGRVIP-ESVIYSYGTVLLDLLS 252
+ FG+ + ++ K++ + PE + R ++ I+S+G ++L +
Sbjct: 158 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 217
Query: 253 GKHIPPSHALDVIRGKNLLLLMD-SSLEGQYANED-----ATQLVELASKCLQYEAKDRP 306
G P H ++ L L D SLE +++ ++ S CLQ + + RP
Sbjct: 218 GA--APYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 275
Query: 307 DVKFLL 312
LL
Sbjct: 276 TAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 100/246 (40%), Gaps = 24/246 (9%)
Query: 89 VAIKRFS-RQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDT--- 144
VAIKR + + + + E + H +V+ DE LV + + +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 145 LSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRL 202
+ KH+ + +A + + L+ +N +++ D+ A +L EDG ++
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162
Query: 203 SSFGL---------MKNSRDGKSYSTNLAYTPPEFLRTGRVIP-ESVIYSYGTVLLDLLS 252
+ FG+ + ++ K++ + PE + R ++ I+S+G ++L +
Sbjct: 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 222
Query: 253 GKHIPPSHALDVIRGKNLLLLMD-SSLEGQYANED-----ATQLVELASKCLQYEAKDRP 306
G P H ++ L L D SLE +++ ++ S CLQ + + RP
Sbjct: 223 GA--APYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 280
Query: 307 DVKFLL 312
LL
Sbjct: 281 TAAELL 286
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 127 CAEGDERLL--VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNR 181
CA D++ L V +YMP L + ++D P W +Y A+ ALD +S
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKW-----AKFYTAEVVLALDAIHSMGL 195
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFG-LMKNSRDGKSYSTNLAYTP----PEFLRT----G 232
++ D+ +L D+ G +L+ FG MK G + TP PE L++ G
Sbjct: 196 -IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 233 RVIPESVIYSYGTVLLDLLSG 253
E +S G L ++L G
Sbjct: 255 YYGRECDWWSVGVFLFEMLVG 275
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 89 VAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLLVAQYM 140
VA+K+ SR QS + E L +++H+ ++ L+ E ++ LV M
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 109
Query: 141 PND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
D + K Q L + + Y I + L + +S + ++ DL + +ED
Sbjct: 110 GADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDC 162
Query: 199 DPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
+ ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL+G+ +
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 257 PP 258
P
Sbjct: 223 FP 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 45 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 105 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 157
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 252 SGKHIPP 258
+G+ + P
Sbjct: 218 TGRTLFP 224
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 89 VAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLLVAQYM 140
VA+K+ SR QS + E L +++H+ ++ L+ E ++ LV M
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 109
Query: 141 PND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
D + K Q L + + Y I + L + +S + ++ DL + +ED
Sbjct: 110 GADLNNIVK------XQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDX 162
Query: 199 DPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
+ ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL+G+ +
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 257 PP 258
P
Sbjct: 223 FP 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 108 EAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAY 167
E L V H ++ + G + + ++ Y+ L L + P P +
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP-----VAKF 110
Query: 168 YIAQ---ALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYT 224
Y A+ AL++ +S++ +Y DL +L D++G +++ FG K D + L T
Sbjct: 111 YAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGT 166
Query: 225 P----PEFLRTGRVIPESVIYSYGTVLLDLLSG 253
P PE + T +S+G ++ ++L+G
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 89 VAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLLVAQYM 140
VA+K+ SR QS + E L +++H+ ++ L+ E ++ LV M
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 109
Query: 141 PND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
D + K Q L + + Y I + L + +S + ++ DL + +ED
Sbjct: 110 GADLNNIVK------XQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDC 162
Query: 199 DPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
+ ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL+G+ +
Sbjct: 163 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 257 PP 258
P
Sbjct: 223 FP 224
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 55 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 114
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 115 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 167
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL
Sbjct: 168 VNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 227
Query: 252 SGKHIPP 258
+G+ + P
Sbjct: 228 TGRTLFP 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 89 VAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLLVAQYM 140
VA+K+ SR QS + E L +++H+ ++ L+ E ++ LV M
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 115
Query: 141 PND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
D + K Q L + + Y I + L + +S + ++ DL + +ED
Sbjct: 116 GADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDS 168
Query: 199 DPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
+ ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL+G+ +
Sbjct: 169 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 257 PP 258
P
Sbjct: 229 FP 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 89 VAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLLVAQYM 140
VA+K+ SR QS + E L +++H+ ++ L+ E ++ LV M
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 111
Query: 141 PND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
D + K Q L + + Y I + L + +S + ++ DL + +ED
Sbjct: 112 GADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDS 164
Query: 199 DPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
+ ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL+G+ +
Sbjct: 165 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 257 PP 258
P
Sbjct: 225 FP 226
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 135 LVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF 194
L+ Y+ L HL ++ E+++ V I AL+H + +Y D+ +L
Sbjct: 136 LILDYINGGELFTHLSQRERFT-EHEVQIYVGE-IVLALEHLHKLG-IIYRDIKLENILL 192
Query: 195 DEDGDPRLSSFGLMK-----NSRDGKSYSTNLAYTPPEFLRTGRVIPESVI--YSYGTVL 247
D +G L+ FGL K + + + Y P+ +R G + + +S G ++
Sbjct: 193 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 252
Query: 248 LDLLSG 253
+LL+G
Sbjct: 253 YELLTG 258
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 64 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 123
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 124 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 176
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL
Sbjct: 177 VNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 236
Query: 252 SGKHIPPS 259
+G+ + P
Sbjct: 237 TGRTLFPG 244
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 65 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 124
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 125 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 177
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL
Sbjct: 178 VNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 252 SGKHIPPS 259
+G+ + P
Sbjct: 238 TGRTLFPG 245
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 51 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 110
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 111 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 163
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL
Sbjct: 164 VNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 252 SGKHIPP 258
+G+ + P
Sbjct: 224 TGRTLFP 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 41 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 101 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 153
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL
Sbjct: 154 VNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 252 SGKHIPP 258
+G+ + P
Sbjct: 214 TGRTLFP 220
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 61 FSSELIVSESGDKAPNVVYRGRL------KNNRLVAIKRFS-RQSWPDPHQFVTEAAGLG 113
S+ + E G+ VY+G L + + VAIK + P +F EA
Sbjct: 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 84
Query: 114 NVRHKRLVNLIGC-------------CAEGD-ERLLVAQYMPNDTLSKHLFHWDKQPLPW 159
++H +V L+G C+ GD LV + +D S K L
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 160 EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
V + IA +++ +S + ++ DL VL + + ++S GL + Y
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 220 ------NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ + PE + G+ +S I+SYG VL ++ S
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 167 YYIAQALDHCNS--QNRKLYHDLNAYRVLFDEDGDPRLSSFG-LMKNSRDGKSYSTNLAY 223
+YI + + +S Q ++ D+ VL D +G RL+ FG +K + DG S+
Sbjct: 179 FYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVG 238
Query: 224 TP----PEFLRT-----GRVIPESVIYSYGTVLLDLLSGK 254
TP PE L+ G+ PE +S G + ++L G+
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 87 RLVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHK-RLVNLIGCCAE-GDERLLVAQYMPND 143
R VA+K + H+ ++E L ++ H +VNL+G C + G +++ ++
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 144 TLSKHLFHWDKQPLPW-------------EMRVRVAYYIAQALDHCNSQNRKLYHDLNAY 190
LS +L + +P+ E + ++ +A+ ++ S+ + ++ DL A
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAAR 177
Query: 191 RVLFDEDGDPRLSSFGLMKN-------SRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSY 243
+L E ++ FGL ++ R G + L + PE + +S ++S+
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 244 GTVLLDLLS 252
G +L ++ S
Sbjct: 237 GVLLWEIFS 245
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 137 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 137 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 134 LLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNS--QNRKLYHDLNAYR 191
L++ Y+ D L+ L + LP +M +YI + + +S Q ++ D+
Sbjct: 167 LVMDYYVGGDLLT--LLSKFEDKLPEDM---ARFYIGEMVLAIDSIHQLHYVHRDIKPDN 221
Query: 192 VLFDEDGDPRLSSFG-LMKNSRDGKSYSTNLAYTP----PEFLRT-----GRVIPESVIY 241
VL D +G RL+ FG +K + DG S+ TP PE L+ G+ PE +
Sbjct: 222 VLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 281
Query: 242 SYGTVLLDLLSGK 254
S G + ++L G+
Sbjct: 282 SLGVCMYEMLYGE 294
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 167 YYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTP 225
Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 139 YQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 226 PEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 141 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 199
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 137 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 195
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 135 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 193
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 129 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 187
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 135 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 135 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 136 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 142 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 142 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 142 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 135 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 193
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 141 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 199
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 153 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 211
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPS 259
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 132 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 126 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
Y++ Q + NR ++ DL + ++D D ++ FGL K DG K+
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGT 205
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E I+S G +L LL GK P ++ + + +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFETSCLKETYIRIKKNEYSVP 262
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDV------KFLLSAVAPLQKQT 322
++ N A+ L+ + L + RP V +F S AP++ T
Sbjct: 263 RHINPVASALIR---RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 150 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 208
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPS 259
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 132 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 132 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 127 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 185
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 61 FSSELIVSESGDKAPNVVYRGRL------KNNRLVAIKRFS-RQSWPDPHQFVTEAAGLG 113
S+ + E G+ VY+G L + + VAIK + P +F EA
Sbjct: 8 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 67
Query: 114 NVRHKRLVNLIGC-------------CAEGD-ERLLVAQYMPNDTLSKHLFHWDKQPLPW 159
++H +V L+G C+ GD LV + +D S K L
Sbjct: 68 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127
Query: 160 EMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYST 219
V + IA +++ +S + ++ DL VL + + ++S GL + Y
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 220 ------NLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+ + PE + G+ +S I+SYG VL ++ S
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2YVH|A Chain A, Crystal Structure Of The Operator-Binding Form Of The
Multi-Drug Binding Transcriptional Repressor Cgmr
pdb|2YVH|B Chain B, Crystal Structure Of The Operator-Binding Form Of The
Multi-Drug Binding Transcriptional Repressor Cgmr
pdb|2YVH|C Chain C, Crystal Structure Of The Operator-Binding Form Of The
Multi-Drug Binding Transcriptional Repressor Cgmr
pdb|2YVH|D Chain D, Crystal Structure Of The Operator-Binding Form Of The
Multi-Drug Binding Transcriptional Repressor Cgmr
Length = 177
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
HQ++ + L N HKR V L+ A+G L V Y+ +D LSK
Sbjct: 118 HQWIPDTDDLENDAHKRAVYLVQLAADG---LFVHDYIHDDVLSK 159
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 89 VAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLLVAQYM 140
VA+K+ SR QS + E L +++H+ ++ L+ E ++ LV M
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 115
Query: 141 PND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
D + K Q L + + Y I + L + +S + ++ DL + +ED
Sbjct: 116 GADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDC 168
Query: 199 DPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
+ ++ FGL +++ D + Y Y PE + ++V I+S G ++ +LL+G+ +
Sbjct: 169 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
Query: 257 PP 258
P
Sbjct: 229 FP 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 127 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 185
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 149 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 207
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPPS 259
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 128 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 186
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 167 YYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTP 225
Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 128 YQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 226 PEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|2ZOZ|A Chain A, Crystal Structure Of The Ethidium-bound Form Of The
Multi-drug Binding Transcriptional Repressor Cgmr
pdb|2ZOZ|B Chain B, Crystal Structure Of The Ethidium-bound Form Of The
Multi-drug Binding Transcriptional Repressor Cgmr
Length = 183
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
HQ++ + L N HKR V L+ A+G L V Y+ +D LSK
Sbjct: 118 HQWIPDTDDLENDAHKRAVYLVQLAADG---LFVHDYIHDDVLSK 159
>pdb|2ZOY|A Chain A, The Multi-Drug Binding Transcriptional Repressor Cgmr
(Cgl2612 Protein) From C.Glutamicum
pdb|2ZOY|B Chain B, The Multi-Drug Binding Transcriptional Repressor Cgmr
(Cgl2612 Protein) From C.Glutamicum
Length = 185
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
HQ++ + L N HKR V L+ A+G L V Y+ +D LSK
Sbjct: 118 HQWIPDTDDLENDAHKRAVYLVQLAADG---LFVHDYIHDDVLSK 159
>pdb|2YVE|A Chain A, Crystal Structure Of The Methylene Blue-bound Form Of The
Multi-drug Binding Transcriptional Repressor Cgmr
pdb|2YVE|B Chain B, Crystal Structure Of The Methylene Blue-bound Form Of The
Multi-drug Binding Transcriptional Repressor Cgmr
Length = 185
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 103 HQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPNDTLSK 147
HQ++ + L N HKR V L+ A+G L V Y+ +D LSK
Sbjct: 118 HQWIPDTDDLENDAHKRAVYLVQLAADG---LFVHDYIHDDVLSK 159
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 7/139 (5%)
Query: 120 LVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ 179
L L C D V +Y+ L H+ + P V A IA L S+
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP--HAVFYAAEIAIGLFFLQSK 140
Query: 180 NRKLYHDLNAYRVLFDEDGDPRLSSFGLMK-NSRDG---KSYSTNLAYTPPEFLRTGRVI 235
+Y DL V+ D +G +++ FG+ K N DG K + Y PE +
Sbjct: 141 G-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 199
Query: 236 PESVIYSYGTVLLDLLSGK 254
+++G +L ++L+G+
Sbjct: 200 KSVDWWAFGVLLYEMLAGQ 218
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCC---AEGD 131
V++ R K + VA+K+ ++ + P + E L ++H+ +VNLI C A
Sbjct: 34 VFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 93
Query: 132 ERLLVAQYMPNDTLSKHL----------FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
R + Y+ D L F + +M + YYI +N+
Sbjct: 94 NRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI--------HRNK 145
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFG------LMKNSRDGKSYS--TNLAYTPPEFLRTGR 233
L+ D+ A VL DG +L+ FG L KNS+ + + L Y PPE L R
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 89 VAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLLVAQYM 140
VA+K+ SR QS + E L +++H+ ++ L+ E ++ LV M
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 132
Query: 141 PND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDG 198
D + K Q L + + Y I + L + +S + ++ DL + +ED
Sbjct: 133 GADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDC 185
Query: 199 DPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHI 256
+ ++ FGL +++ D Y Y PE + ++V I+S G ++ +LL+G+ +
Sbjct: 186 ELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
Query: 257 PP 258
P
Sbjct: 246 FP 247
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 66 IVSESGDKAPNVVYRGRLK-NNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLI 124
++ + G+ + VY+ K ++VAIK+ +S D + + E + + +V
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYY 90
Query: 125 GCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLY 184
G + + +V +Y ++S + + L + + + L++ + RK++
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFM-RKIH 148
Query: 185 HDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPE------S 238
D+ A +L + +G +L+ FG+ D + + TP F VI E +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTP--FWMAPEVIQEIGYNCVA 206
Query: 239 VIYSYGTVLLDLLSGKHIPP 258
I+S G +++ GK PP
Sbjct: 207 DIWSLGITAIEMAEGK--PP 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 45 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 105 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 157
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + + Y PE + ++V I+S G ++ +LL
Sbjct: 158 VNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 252 SGKHIPP 258
+G+ + P
Sbjct: 218 TGRTLFP 224
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMKNS-------------RDGKSYSTNLAYTPPEF-- 228
+ DL +L ++G P L G M + +D + ++Y PE
Sbjct: 157 HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS 216
Query: 229 LRTGRVIPESV-IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYANEDA 287
+++ VI E ++S G VL ++ G+ + + +G ++ L + + L + +
Sbjct: 217 VQSHCVIDERTDVWSLGCVLYAMMFGE---GPYDMVFQKGDSVALAVQNQLSIPQSPRHS 273
Query: 288 TQLVELASKCLQYEAKDRPDVKFLLSAVAPLQ 319
+ L +L + + + RP + LLS + LQ
Sbjct: 274 SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 45 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 104
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 105 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 157
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + + Y PE + ++V I+S G ++ +LL
Sbjct: 158 VNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 252 SGKHIPP 258
+G+ + P
Sbjct: 218 TGRTLFP 224
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 7/139 (5%)
Query: 120 LVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ 179
L L C D V +Y+ L H+ + P V A IA L S+
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP--HAVFYAAEIAIGLFFLQSK 461
Query: 180 NRKLYHDLNAYRVLFDEDGDPRLSSFGLMK-NSRDG---KSYSTNLAYTPPEFLRTGRVI 235
+Y DL V+ D +G +++ FG+ K N DG K + Y PE +
Sbjct: 462 G-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 520
Query: 236 PESVIYSYGTVLLDLLSGK 254
+++G +L ++L+G+
Sbjct: 521 KSVDWWAFGVLLYEMLAGQ 539
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 18/168 (10%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
Y++ Q + NR ++ DL + ++D D ++ FGL K DG K
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGT 205
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E I+S G +L LL GK P ++ + + +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFETSCLKETYIRIKKNEYSVP 262
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDV------KFLLSAVAPLQKQT 322
++ N A+ L+ + L + RP V +F S AP++ T
Sbjct: 263 RHINPVASALIR---RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 18/168 (10%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
Y++ Q + NR ++ DL + ++D D ++ FGL K DG K
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGT 205
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E I+S G +L LL GK P ++ + + +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFETSCLKETYIRIKKNEYSVP 262
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDV------KFLLSAVAPLQKQT 322
++ N A+ L+ + L + RP V +F S AP++ T
Sbjct: 263 RHINPVASALIR---RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 180 NRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDG---KSYSTNLAYTPPEFLRTG--RV 234
N ++ DL +L D++ RLS FG + G + Y PE L+
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 235 IP----ESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEGQYA------N 284
P E +++ G +L LL+G PP + +L++ +EGQY +
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGS--PP------FWHRRQILMLRMIMEGQYQFSSPEWD 330
Query: 285 EDATQLVELASKCLQYEAKDR 305
+ ++ + +L S+ LQ + + R
Sbjct: 331 DRSSTVKDLISRLLQVDPEAR 351
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 18/168 (10%)
Query: 167 YYIAQALDHCN--SQNRKLYHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDG---KSYSTN 220
Y++ Q + NR ++ DL + ++D D ++ FGL K DG K
Sbjct: 130 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGT 189
Query: 221 LAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG 280
Y PE L E I+S G +L LL GK P ++ + + +
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFETSCLKETYIRIKKNEYSVP 246
Query: 281 QYANEDATQLVELASKCLQYEAKDRPDV------KFLLSAVAPLQKQT 322
++ N A+ L+ + L + RP V +F S AP++ T
Sbjct: 247 RHINPVASALIR---RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 291
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 41 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 101 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 153
Query: 194 FDEDGDPRLSSFGLMKNSRDGKS-YSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D + + Y PE + ++V I+S G ++ +LL
Sbjct: 154 VNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 213
Query: 252 SGKHIPPS 259
+G+ + P
Sbjct: 214 TGRTLFPG 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 9/148 (6%)
Query: 120 LVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQ 179
L L C D V +Y+ L H+ K P + I H +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH---K 138
Query: 180 NRKLYHDLNAYRVLFDEDGDPRLSSFGLMK-NSRDG---KSYSTNLAYTPPEFLRTGRVI 235
+Y DL V+ D +G +++ FG+ K + DG + + Y PE +
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYG 198
Query: 236 PESVIYSYGTVLLDLLSGKHIPPSHALD 263
++YG +L ++L+G+ PP D
Sbjct: 199 KSVDWWAYGVLLYEMLAGQ--PPFDGED 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 32/180 (17%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCC---AEGD 131
V++ R K + VA+K+ ++ + P + E L ++H+ +VNLI C A
Sbjct: 34 VFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 93
Query: 132 ERLLVAQYMPNDTLSKHL----------FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
R + Y+ D L F + +M + YYI +N+
Sbjct: 94 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI--------HRNK 145
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFG------LMKNSRDGKSYS--TNLAYTPPEFLRTGR 233
L+ D+ A VL DG +L+ FG L KNS+ + + L Y PPE L R
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 156 PLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGK 215
P+P + ++ I +AL + ++ ++ D+ +L DE G +L FG+ D K
Sbjct: 120 PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179
Query: 216 SYSTN---LAYTPPEFLRTGRVIP----------ESVIYSYGTVLLDLLSGK 254
+ + AY PE R+ P + ++S G L++L +G+
Sbjct: 180 AKDRSAGCAAYMAPE-----RIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 32/176 (18%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCC---AEGD 131
V++ R K + VA+K+ ++ + P + E L ++H+ +VNLI C A
Sbjct: 33 VFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 92
Query: 132 ERLLVAQYMPNDTLSKHL----------FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
R + Y+ D L F + +M + YYI +N+
Sbjct: 93 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI--------HRNK 144
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFG------LMKNSRDGKSYS--TNLAYTPPEFL 229
L+ D+ A VL DG +L+ FG L KNS+ + + L Y PPE L
Sbjct: 145 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 200
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 32/176 (18%)
Query: 78 VYRGR-LKNNRLVAIKRFSRQSWPD--PHQFVTEAAGLGNVRHKRLVNLIGCC---AEGD 131
V++ R K + VA+K+ ++ + P + E L ++H+ +VNLI C A
Sbjct: 34 VFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY 93
Query: 132 ERLLVAQYMPNDTLSKHL----------FHWDKQPLPWEMRVRVAYYIAQALDHCNSQNR 181
R + Y+ D L F + +M + YYI +N+
Sbjct: 94 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI--------HRNK 145
Query: 182 KLYHDLNAYRVLFDEDGDPRLSSFG------LMKNSRDGKSYS--TNLAYTPPEFL 229
L+ D+ A VL DG +L+ FG L KNS+ + + L Y PPE L
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 88 LVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCC-AEGDERL-LVAQYMPN-- 142
LVA+K+ + S PD + F E L + +V G G + L LV +Y+P+
Sbjct: 54 LVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 143 --DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200
D L +H D L + + I + +++ S+ R ++ DL A +L + +
Sbjct: 113 LRDFLQRHRARLDASRL-----LLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHV 166
Query: 201 RLSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+++ FGL K K Y + + + PE L +S ++S+G VL +L +
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 88 LVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCC-AEGDERL-LVAQYMPN-- 142
LVA+K+ + S PD + F E L + +V G G + L LV +Y+P+
Sbjct: 41 LVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 143 --DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200
D L +H D L + + I + +++ S+ R ++ DL A +L + +
Sbjct: 100 LRDFLQRHRARLDASRL-----LLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHV 153
Query: 201 RLSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+++ FGL K K Y + + + PE L +S ++S+G VL +L +
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 169 IAQALDHCNSQNRKLYH-DLNAYRVLFDEDGDPRLSSFGLMKNSR-DGKSYST--NLAYT 224
I + +D+ +S +KL H DL + + ++ FGL+ + + DGK + L Y
Sbjct: 145 ITKGVDYIHS--KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYM 202
Query: 225 PPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI--RGKNLLLLMDSSLEGQY 282
PE + + E +Y+ G +L +LL H D K L D + +
Sbjct: 203 SPEQISSQDYGKEVDLYALGLILAELL--------HVCDTAFETSKFFTDLRDGIISDIF 254
Query: 283 ANEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
++ T L +L SK + +DRP+ +L + +K E
Sbjct: 255 DKKEKTLLQKLLSK----KPEDRPNTSEILRTLTVWKKSPE 291
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 88 LVAIKRFSRQSWPDPHQ-FVTEAAGLGNVRHKRLVNLIGCC-AEGDERL-LVAQYMPN-- 142
LVA+K+ + S PD + F E L + +V G G + L LV +Y+P+
Sbjct: 42 LVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 143 --DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDP 200
D L +H D L + + I + +++ S+ R ++ DL A +L + +
Sbjct: 101 LRDFLQRHRARLDASRL-----LLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHV 154
Query: 201 RLSSFGLMKNSRDGKSY-------STNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
+++ FGL K K Y + + + PE L +S ++S+G VL +L +
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 131 DERLL--VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH 185
D+R L V +YMP L + ++D P W +Y A+ ALD +S ++
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLMSNYD-VPEKW-----ARFYTAEVVLALDAIHSMGF-IHR 197
Query: 186 DLNAYRVLFDEDGDPRLSSFG-LMKNSRDGKSYSTNLAYTP----PEFLRT----GRVIP 236
D+ +L D+ G +L+ FG MK +++G TP PE L++ G
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 257
Query: 237 ESVIYSYGTVLLDLLSG 253
E +S G L ++L G
Sbjct: 258 ECDWWSVGVFLYEMLVG 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 131 DERLL--VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH 185
D+R L V +YMP L + ++D P W +Y A+ ALD +S ++
Sbjct: 145 DDRYLYMVMEYMPGGDLVNLMSNYD-VPEKW-----ARFYTAEVVLALDAIHSMGF-IHR 197
Query: 186 DLNAYRVLFDEDGDPRLSSFG-LMKNSRDGKSYSTNLAYTP----PEFLRT----GRVIP 236
D+ +L D+ G +L+ FG MK +++G TP PE L++ G
Sbjct: 198 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 257
Query: 237 ESVIYSYGTVLLDLLSG 253
E +S G L ++L G
Sbjct: 258 ECDWWSVGVFLYEMLVG 274
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGK--SYSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ + S+
Sbjct: 138 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 233
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 131 DERLL--VAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHCNSQNRKLYH 185
D+R L V +YMP L + ++D P W +Y A+ ALD +S ++
Sbjct: 140 DDRYLYMVMEYMPGGDLVNLMSNYD-VPEKW-----ARFYTAEVVLALDAIHSMGF-IHR 192
Query: 186 DLNAYRVLFDEDGDPRLSSFG-LMKNSRDGKSYSTNLAYTP----PEFLRT----GRVIP 236
D+ +L D+ G +L+ FG MK +++G TP PE L++ G
Sbjct: 193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 252
Query: 237 ESVIYSYGTVLLDLLSG 253
E +S G L ++L G
Sbjct: 253 ECDWWSVGVFLYEMLVG 269
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y Y
Sbjct: 159 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 217
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + +V I+S G ++ +LL+G+ + P
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGK--SYSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ + S+
Sbjct: 142 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 237
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 112/277 (40%), Gaps = 33/277 (11%)
Query: 60 GFSSELIVSESGDKAPNVVYRGRLKNNRLVAIKRFSRQSWP--DPHQFVTEAAGLGNVRH 117
F ++L + SG+ +++GR + N +V +K + W F E L H
Sbjct: 13 NFLTKLNENHSGE-----LWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 118 KRLVNLIGCCAE--GDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDH 175
++ ++G C L+ +MP +L L + V+ A +A+ +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 176 CNSQNRKL-YHDLNAYRVLFDEDGDPRLSSFGL-MKNSRDGKSYSTNLAYTPPEFLRTGR 233
++ + H LN+ V+ DED R+S + G+ Y+ A+ PE L+
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP--AWVAPEALQKK- 183
Query: 234 VIPESV------IYSYGTVLLDLLSGKHIPPSHALDVIRGKNLLLLMDSSLEG---QYAN 284
PE ++S+ +L +L++ + +P + N+ + M +LEG
Sbjct: 184 --PEDTNRRSADMWSFAVLLWELVT-REVPFADL------SNMEIGMKVALEGLRPTIPP 234
Query: 285 EDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQ 321
+ + +L C+ + RP ++ + +Q +
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 19/188 (10%)
Query: 84 KNNRLVAIKRFSR--QSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCA------EGDERLL 135
K VA+K+ SR QS + E L +++H+ ++ L+ E ++ L
Sbjct: 65 KTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 124
Query: 136 VAQYMPND--TLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVL 193
V M D + K Q L + + Y I + L + +S + ++ DL +
Sbjct: 125 VTHLMGADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLA 177
Query: 194 FDEDGDPRLSSFGLMKNSRDG-KSYSTNLAYTPPEFLRTGRVIPESV-IYSYGTVLLDLL 251
+ED + ++ FGL +++ D Y PE + ++V I+S G ++ +LL
Sbjct: 178 VNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 237
Query: 252 SGKHIPPS 259
+G+ + P
Sbjct: 238 TGRTLFPG 245
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 165 VAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKS-YSTNLAY 223
+ Y I + L + +S + ++ DL + +ED + ++ FGL +++ D + Y
Sbjct: 130 LIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWY 188
Query: 224 TPPEFLRTGRVIPESV-IYSYGTVLLDLLSGKHIPP 258
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 186 PVDVWSCGIVLTAMLAGE 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 20/186 (10%)
Query: 84 KNNRLVAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142
+ +LVAIK ++++ E A L ++H +V L G L+ Q +
Sbjct: 41 RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG 100
Query: 143 ----DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---D 195
D + + F+ ++ R+ + + A+ + + ++ DL +L+ D
Sbjct: 101 GELFDRIVEKGFYTERDA------SRLIFQVLDAVKYLHDLGI-VHRDLKPENLLYYSLD 153
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNL---AYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
ED +S FGL K G ST Y PE L +S G + LL
Sbjct: 154 EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 253 GKHIPP 258
G PP
Sbjct: 214 G--YPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 20/186 (10%)
Query: 84 KNNRLVAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142
+ +LVAIK ++++ E A L ++H +V L G L+ Q +
Sbjct: 41 RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG 100
Query: 143 ----DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---D 195
D + + F+ ++ R+ + + A+ + + ++ DL +L+ D
Sbjct: 101 GELFDRIVEKGFYTERDA------SRLIFQVLDAVKYLHDLGI-VHRDLKPENLLYYSLD 153
Query: 196 EDGDPRLSSFGLMKNSRDGKSYSTNL---AYTPPEFLRTGRVIPESVIYSYGTVLLDLLS 252
ED +S FGL K G ST Y PE L +S G + LL
Sbjct: 154 EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 253 GKHIPP 258
G PP
Sbjct: 214 G--YPP 217
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 148 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 206
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 207 VASRYFKGPELL 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 12/182 (6%)
Query: 84 KNNRLVAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142
+ +LVAIK ++++ E A L ++H +V L G L+ Q +
Sbjct: 41 RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG 100
Query: 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGD 199
L + +K R+ + + A+ + + ++ DL +L+ DED
Sbjct: 101 GELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGI-VHRDLKPENLLYYSLDEDSK 157
Query: 200 PRLSSFGLMKNSRDGKSYSTNL---AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI 256
+S FGL K G ST Y PE L +S G + LL G
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--Y 215
Query: 257 PP 258
PP
Sbjct: 216 PP 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGK--SYSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ + S+
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 128 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 187 VASRYFKGPELL 198
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 129 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 187
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 188 VASRYFKGPELL 199
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 128 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 187 VASRYFKGPELL 198
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 165 VAYYIAQ---ALDHCNSQNRKLYHDLNAYRVLFDED-GDPRLSSFGLMKNSRDGKSYSTN 220
+ YYI + ALD+C+SQ ++ D+ + V+ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 221 LA---YTPPEFL 229
+A + PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGK--SYSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ + ++
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 117 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 146 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 116 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 123 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 138 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 142 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 237
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 118 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 213
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 119 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 214
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 144 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 239
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 184 YHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDG--KSYSTNLAYTPPEFLRTGRVIPE 237
+ D+ +L DE + ++S FGL N+R+ L Y PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 238 SV-IYSYGTVLLDLLSGK 254
V ++S G VL +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 29/191 (15%)
Query: 164 RVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN-----------SR 212
R+ I +AL + +SQ ++ DL + DE + ++ FGL KN S+
Sbjct: 120 RLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 213 DGKSYSTNLA-------YTPPEFLR-TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV 264
+ S NL Y E L TG + +YS G + +++ P S ++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI----YPFSTGME- 233
Query: 265 IRGKNLLLLMDSSLEGQYANEDATQLVE--LASKCLQYEAKDRPDVKFLL-SAVAPLQKQ 321
R L L S+E +D VE + + ++ RP + LL S P++ Q
Sbjct: 234 -RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292
Query: 322 TEVASHVLMGL 332
EV L L
Sbjct: 293 DEVIKEALKSL 303
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSR-DGKSYST--NLAYTP 225
I + +D+ +S+ + + DL + + ++ FGL+ + + DGK + L Y
Sbjct: 131 ITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMS 189
Query: 226 PEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDVI--RGKNLLLLMDSSLEGQYA 283
PE + + E +Y+ G +L +LL H D K L D + +
Sbjct: 190 PEQISSQDYGKEVDLYALGLILAELL--------HVCDTAFETSKFFTDLRDGIISDIFD 241
Query: 284 NEDATQLVELASKCLQYEAKDRPDVKFLLSAVAPLQKQTE 323
++ T L +L SK + +DRP+ +L + +K E
Sbjct: 242 KKEKTLLQKLLSK----KPEDRPNTSEILRTLTVWKKSPE 277
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 29/191 (15%)
Query: 164 RVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKN-----------SR 212
R+ I +AL + +SQ ++ DL + DE + ++ FGL KN S+
Sbjct: 120 RLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 213 DGKSYSTNLA-------YTPPEFLR-TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDV 264
+ S NL Y E L TG + +YS G + +++ P S ++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI----YPFSTGME- 233
Query: 265 IRGKNLLLLMDSSLEGQYANEDATQLVE--LASKCLQYEAKDRPDVKFLL-SAVAPLQKQ 321
R L L S+E +D VE + + ++ RP + LL S P++ Q
Sbjct: 234 -RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292
Query: 322 TEVASHVLMGL 332
EV L L
Sbjct: 293 DEVIKEALKSL 303
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 169 IAQALDHCNSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMK----NSRDGKS--YSTNLA 222
I AL++ + + ++ DL +L +ED +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 223 YTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHA 261
Y PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 12/182 (6%)
Query: 84 KNNRLVAIKRFSRQSWPDPH-QFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVAQYMPN 142
+ +LVAIK ++++ E A L ++H +V L G L+ Q +
Sbjct: 41 RTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG 100
Query: 143 DTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLF---DEDGD 199
L + +K R+ + + A+ + + ++ DL +L+ DED
Sbjct: 101 GELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGI-VHRDLKPENLLYYSLDEDSK 157
Query: 200 PRLSSFGLMKNSRDGKSYSTNL---AYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHI 256
+S FGL K G ST Y PE L +S G + LL G
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--Y 215
Query: 257 PP 258
PP
Sbjct: 216 PP 217
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 120 LVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHC 176
LV L + +V +YMP + HL + P +Y AQ ++
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-----HARFYAAQIVLTFEYL 157
Query: 177 NSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYS--TNLAYTPPEFLRTGRV 234
+S + +Y DL +L D+ G +++ FG K + G+++ Y PE + +
Sbjct: 158 HSLDL-IYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWXLCGTPEYLAPEIILSKGY 215
Query: 235 IPESVIYSYGTVLLDLLSGKHIPPSHA 261
++ G ++ ++ +G PP A
Sbjct: 216 NKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 120 LVNLIGCCAEGDERLLVAQYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQ---ALDHC 176
LV L + +V +YMP + HL + P +Y AQ ++
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-----HARFYAAQIVLTFEYL 157
Query: 177 NSQNRKLYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYS--TNLAYTPPEFLRTGRV 234
+S + +Y DL +L D+ G +++ FG K + G+++ Y PE + +
Sbjct: 158 HSLDL-IYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWXLCGTPEYLAPEIILSKGY 215
Query: 235 IPESVIYSYGTVLLDLLSGKHIPPSHA 261
++ G ++ ++ +G PP A
Sbjct: 216 NKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 104/274 (37%), Gaps = 37/274 (13%)
Query: 78 VYRGRLKNNRLVAIKRFSRQSWPDPHQFVTEAAGLGNVRHKRLVNLIGCCAEGDERLLVA 137
VY GR + + R + F E RH+ +V +G C ++
Sbjct: 49 VYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108
Query: 138 QYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYIAQALDHCNSQNRKLYHDLNAYRVLFDED 197
TL + K L ++A I + + + +++ L+ DL + V +D +
Sbjct: 109 SLCKGRTLYS-VVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-N 165
Query: 198 GDPRLSSFGLMKNS-------RDGKSYSTN--LAYTPPEFLRTGRVIPE----------- 237
G ++ FGL S R+ K N L + PE +R ++ P+
Sbjct: 166 GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR--QLSPDTEEDKLPFSKH 223
Query: 238 SVIYSYGTVLLDLLSGKHIP----PSHALDVIRGKNLLLLMDSSLEGQYANEDATQLVEL 293
S +++ GT+ + L + P P+ A+ G M +L ++ + ++
Sbjct: 224 SDVFALGTIWYE-LHAREWPFKTQPAEAIIWQMGTG----MKPNLSQIGMGKEISDILLF 278
Query: 294 ASKCLQYEAKDRPDVKFLLSAVAPLQKQTEVASH 327
C +E ++RP L+ + L K+ SH
Sbjct: 279 ---CWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,836,670
Number of Sequences: 62578
Number of extensions: 544903
Number of successful extensions: 1906
Number of sequences better than 100.0: 563
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 470
Number of HSP's that attempted gapping in prelim test: 1644
Number of HSP's gapped (non-prelim): 568
length of query: 497
length of database: 14,973,337
effective HSP length: 103
effective length of query: 394
effective length of database: 8,527,803
effective search space: 3359954382
effective search space used: 3359954382
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)