BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010935
(497 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ATB4|TAD2B_ARATH Transcriptional adapter ADA2b OS=Arabidopsis thaliana GN=ADA2B PE=1
SV=1
Length = 487
Score = 589 bits (1518), Expect = e-167, Method: Compositional matrix adjust.
Identities = 299/461 (64%), Positives = 353/461 (76%), Gaps = 40/461 (8%)
Query: 37 MGRSRGNFHANDEDPTQRSRRKKN---VSSDNSDTAAPGQGAGEGKRALYHCNYCNKDIT 93
MGRSRGNF N EDPTQR+R+KKN V + S + PG G GK Y+C+YC KDIT
Sbjct: 1 MGRSRGNFQ-NFEDPTQRTRKKKNAANVENFESTSLVPGAEGG-GK---YNCDYCQKDIT 55
Query: 94 GKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLE 153
GKIRIKCAVCPDFDLCIEC SVG E+ PHK +HPYRVM NL+FPLICPDW+ADDE+LLLE
Sbjct: 56 GKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHPYRVMGNLTFPLICPDWSADDEMLLLE 115
Query: 154 GIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAK 213
G+E+YGLGNWAE+AEHVGTK+KE C+EHY N+Y+NSPFFPLPDMSHV GKNRKEL AMAK
Sbjct: 116 GLEIYGLGNWAEVAEHVGTKSKEQCLEHYRNIYLNSPFFPLPDMSHVAGKNRKELQAMAK 175
Query: 214 GHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKPVT 273
G IDDKK E +KEE PFSP +VK+E+ K + +RS GKKPV+
Sbjct: 176 GRIDDKK-----AEQNMKEEYPFSPPKVKVEDTQK----------ESFVDRSFGGKKPVS 220
Query: 274 SGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKR 333
+ + SLVELS YN KR+EFDPEYDNDAEQLLAEMEFK+ D+ EE ++KLRVLRIYSKR
Sbjct: 221 TSVNN-SLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEEHELKLRVLRIYSKR 279
Query: 334 LDERKRRKDFILERNLLYPNPFEKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEH 393
LDERKRRK+FI+ERNLLYPNPFEKDLS EE+ CRR DVFMRFHSKE+H++LL+ V+SE+
Sbjct: 280 LDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNVVSEY 339
Query: 394 RTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGGHAGASSQGGANVFM 453
R +KR++DLKEA+ AGCR++AEA+RYL KR RE EE R KE G G +
Sbjct: 340 RMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKRENEEGMNRGKESGQFGQ---------I 390
Query: 454 ASESLRKDSNSNSRPSGQASSSHVNDLYIMGFNETQLLSEA 494
A E SRP QASSS+VNDL ++GF E+QLLSE+
Sbjct: 391 AGE-------MGSRPPVQASSSYVNDLDLIGFTESQLLSES 424
>sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica
GN=ADA2 PE=2 SV=2
Length = 567
Score = 533 bits (1372), Expect = e-150, Method: Compositional matrix adjust.
Identities = 285/499 (57%), Positives = 347/499 (69%), Gaps = 45/499 (9%)
Query: 37 MGRSRGNFHANDEDPTQRSRRKKNVSS----DNSDTAAPGQGAGEGKRALYHCNYCNKDI 92
MGRSRG ++ D++ RS+R++ SS D+ A G G G GK+ALYHCNYCNKDI
Sbjct: 1 MGRSRGVPNSGDDETNHRSKRRRVASSGDAPDSLSAACGGAGEGGGKKALYHCNYCNKDI 60
Query: 93 TGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLL 152
+GKIRIKC+ CPDFDLC+ECFSVG EV PH+SNHPYRVMDNLSFPLICPDWNAD+EILLL
Sbjct: 61 SGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNLSFPLICPDWNADEEILLL 120
Query: 153 EGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMA 212
EGIEMYGLGNWAE+AEHVGTKTK CI+HYT YMNSP +PLPDMSHV GKNRKELLAMA
Sbjct: 121 EGIEMYGLGNWAEVAEHVGTKTKAQCIDHYTTAYMNSPCYPLPDMSHVNGKNRKELLAMA 180
Query: 213 KGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGR------------------ 254
K + KK PG+ T K+ESPFSP RVK+E+ G +GR
Sbjct: 181 KVQGESKK--VLPGDLTPKDESPFSPPRVKVEDALGEGLAGRSPSHIAGGANKKASNVGQ 238
Query: 255 ---GLNA----DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLA 307
G N D +RS KKP S ++GPSL ELSGYNSKR EFDPEYDNDAEQ LA
Sbjct: 239 FKDGANVAKVEDGHVDRSIGVKKPRYSADEGPSLTELSGYNSKRHEFDPEYDNDAEQALA 298
Query: 308 EMEFKDADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEERELC 367
EMEFK+ DSE +R++KLRVLRIY RLDERKRRK+FILERNLL+PNP EKDL+ E++E+
Sbjct: 299 EMEFKETDSETDRELKLRVLRIYLSRLDERKRRKEFILERNLLFPNPLEKDLTNEDKEVY 358
Query: 368 RRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGRE 427
RY VFMRF SKE+HE L+++V+ E + +RIQ+L+E R+AGCRT AEA ++E KR +E
Sbjct: 359 HRYKVFMRFLSKEEHEALVRSVLEERKIRRRIQELQECRSAGCRTLAEAKIHIEQKRKKE 418
Query: 428 AEEASRRAKEGGHAGAS--------------SQGGANVFMASESLRKDSNSNSRPSGQAS 473
E +++AKE G ++ S G + SL + + +G A
Sbjct: 419 HEVNAQKAKESGQLLSNTKVVHKTNRPMKIESDGNLDQKKGGASLDSTGRDSPKTTGHAG 478
Query: 474 SSHVNDLYIMGFNETQLLS 492
+ H +D I+GF +LLS
Sbjct: 479 TKHWDDWDIVGFPGAELLS 497
>sp|Q9SFD5|TAD2A_ARATH Transcriptional adapter ADA2a OS=Arabidopsis thaliana GN=ADA2A PE=1
SV=1
Length = 548
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/408 (50%), Positives = 282/408 (69%), Gaps = 24/408 (5%)
Query: 37 MGRSRGNFHANDED--PTQRSRRKKNVSSDNSDTA-APGQGAG-EGKRALYHCNYCNKDI 92
MGRS+ +ED P + R+K ++ +N+ + + G AG E K LY CNYC+KD+
Sbjct: 1 MGRSKLASRPAEEDLNPGKSKRKKISLGPENAAASISTGIEAGNERKPGLYCCNYCDKDL 60
Query: 93 TGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLL 152
+G +R KCAVC DFDLC+ECFSVGVE++ HK++HPYRVMDNLSF L+ DWNAD+EILLL
Sbjct: 61 SGLVRFKCAVCMDFDLCVECFSVGVELNRHKNSHPYRVMDNLSFSLVTSDWNADEEILLL 120
Query: 153 EGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMA 212
E I YG GNW E+A+HVG+KT CI+H+ + YM SP FPLPD+SH +GK++ ELLAM+
Sbjct: 121 EAIATYGFGNWKEVADHVGSKTTTECIKHFNSAYMQSPCFPLPDLSHTIGKSKDELLAMS 180
Query: 213 KGHIDDKKGPS---------KPGEATVKEESP-----FSPSRVKIEEMHKVG--PSGRGL 256
K + P+ P A +K E+ P + + K G P + +
Sbjct: 181 KDSAVKTEIPAFVRLSPKEELPVSAEIKHEASGKVNEIDPPLSALAGVKKKGNVPQAKDI 240
Query: 257 ----NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFK 312
A Q++RS KK G P + EL GYN KR+EF+ E+DNDAEQLLA+MEFK
Sbjct: 241 IKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLADMEFK 300
Query: 313 DADSEEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEERELCRRYDV 372
D+D++ ER+ KL+VLRIYSKRLDERKRRK+F+LERNLLYP+ +E LS EER++ + V
Sbjct: 301 DSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKV 360
Query: 373 FMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYL 420
F RF SKE+H++L++ VI EH+ L+RI+DL+EAR AGCRT+++A+R++
Sbjct: 361 FARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFI 408
>sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ADA2 PE=1 SV=1
Length = 434
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 199/397 (50%), Gaps = 59/397 (14%)
Query: 83 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 142
+HC+ C+ D T ++R+ CA+CP++DLC+ CFS G H+ H YR+++ S+P++CPD
Sbjct: 5 FHCDVCSADCTNRVRVSCAICPEYDLCVPCFSQGSYTGKHRPYHDYRIIETNSYPILCPD 64
Query: 143 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVG 202
W AD+E+ L++G + GLGNW +IA+H+G++ KE EHY Y+ S ++P+PD++ +
Sbjct: 65 WGADEELQLIKGAQTLGLGNWQDIADHIGSRGKEEVKEHYLKYYLESKYYPIPDITQNIH 124
Query: 203 KNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQT 262
+ E L + I+ + E P P R
Sbjct: 125 VPQDEFLEQRRHRIESFR------------ERPLEPPR---------------------- 150
Query: 263 ERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDI 322
KP+ S PS E+ G+ R EF+ E++N+AE + +M F+ D + ++
Sbjct: 151 -------KPMAS---VPSCHEVQGFMPGRLEFETEFENEAEGPVKDMVFEPDDQPLDIEL 200
Query: 323 KLRVLRIYSKRLDERKRRKDFILERNLL---YPNPFEKDLSPEERELCRRYDVFMRFHSK 379
K +L IY+ RL R +K + E +L+ +K S E +EL R F R +
Sbjct: 201 KFAILDIYNSRLTTRAEKKRLLFENHLMDYRKLQAIDKKRSKEAKELYNRIKPFARVMTA 260
Query: 380 EDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASRRAKEGG 439
+D E+ + ++ E RIQ L+E R+ G T+ EA L+ +R ++A +S
Sbjct: 261 QDFEEFSKDILEELHCRARIQQLQEWRSNGL-TTLEAG--LKYERDKQARISSFEKFGAS 317
Query: 440 HAGASSQGGANVFMASESLRKDSNSNSRPSGQASSSH 476
A + S+G + R SNS R + + S ++
Sbjct: 318 TAASLSEGNS---------RYRSNSAHRSNAEYSQNY 345
>sp|Q9P7J7|ADA2_SCHPO Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ada2 PE=1 SV=1
Length = 437
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 155/342 (45%), Gaps = 48/342 (14%)
Query: 83 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 142
YHCN C +DIT I I+C C DFDLCI CF+ G + H +HPYR+++ S+P+ +
Sbjct: 6 YHCNVCAQDITRSIHIRCVECVDFDLCIPCFTSGASLGTHHPSHPYRIIETNSYPIFDEN 65
Query: 143 WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFPLPDMSHVV 201
W AD+E+LL++ E GLGNWA+IA++VG +TKE C +HY Y+ S +PL +
Sbjct: 66 WGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTYIESDCYPLASVELPG 125
Query: 202 GKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRG-LNADP 260
+R A + I EA + H++ G L D
Sbjct: 126 PVDRIAFAARKRARI----------EAFQPPPIIPQKPLASTPQCHEIQGYMPGRLEFD- 174
Query: 261 QTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEER 320
E ++ + P+ N +D+D + ++ E
Sbjct: 175 -QEYMNEAELPIKDMN---------------------FDDDLHE----------SAKHEM 202
Query: 321 DIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFH 377
+KL +L IY+ RL R RK I NLL EK +S EER L + F R
Sbjct: 203 QLKLTMLNIYNSRLTRRAVRKQTIFNHNLLDYRRLQANEKRMSKEERNLLNKTKAFARLL 262
Query: 378 SKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRY 419
+ D++ + + + K+I DL+E R G T + +Y
Sbjct: 263 TGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQGHKY 304
>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1
SV=1
Length = 555
Score = 132 bits (331), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 154/347 (44%), Gaps = 57/347 (16%)
Query: 83 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDN----LSFPL 138
Y+C C DI G IR+ CA C +FDLC++CF+ G E+ H++NH Y+ MD LS
Sbjct: 11 YNCTNCQDDIQG-IRVHCAECENFDLCLQCFAAGAEIGAHQNNHSYQFMDTGTSILSVFR 69
Query: 139 ICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMS 198
W A +EI LL+ IE YG GNW +I++H+ TK+ E E Y N ++N
Sbjct: 70 GKGAWTAREEIRLLDAIEQYGFGNWEDISKHIETKSAEDAKEEYVNKFVNG--------- 120
Query: 199 HVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNA 258
+G+ + + D G G S P + +E ++
Sbjct: 121 -TIGRATWTPAQSQRPRLIDHTGDDDAGPLGTNALSTLPPLEINSDEAMQL--------- 170
Query: 259 DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEE 318
GY R F+ EYD AEQL++ + D+E
Sbjct: 171 ---------------------------GYMPNRDSFEREYDPTAEQLISNISLSSEDTEV 203
Query: 319 ERDIKLRVLRIYSKRLDERKRR----KDFILERNLLYPNPF--EKDLSPEERELCRRYDV 372
+ +KL + IY++RL ER RR +D+ L N + ++ L+ E+RE R+ V
Sbjct: 204 DVMLKLAHVDIYTRRLRERARRKRMVRDYQLVSNFFRNRNYAQQQGLTKEQREFRDRFRV 263
Query: 373 FMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRY 419
+ +F++ ++E LL ++ E R +L R G AE +
Sbjct: 264 YAQFYTCNEYERLLGSLEREKELRIRQSELYRYRYNGLTKIAECTHF 310
>sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2
SV=1
Length = 443
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 149/341 (43%), Gaps = 57/341 (16%)
Query: 98 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 155
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 156 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 215
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQAE 135
Query: 216 IDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKPVTSG 275
+K + + S P R + + R G P
Sbjct: 136 ------AAKTADTAIPFHSADDPPRPAFDSL---------------LSRDMAGYMPA--- 171
Query: 276 NDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLD 335
R +F E+DN AE L +++F + DS+ +K+ V+ IY RL
Sbjct: 172 ---------------RADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLK 216
Query: 336 ERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISE 392
ER+RRK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 217 ERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALE 276
Query: 393 HRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASR 433
+ I+ L+E R AG A Y LK+ RE E R
Sbjct: 277 FELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKR 317
>sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1
Length = 443
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 149/341 (43%), Gaps = 57/341 (16%)
Query: 98 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 155
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 156 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 215
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQAE 135
Query: 216 IDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKPVTSG 275
+K + + S P R + + R G P
Sbjct: 136 ------EAKTADTAIPFHSADDPPRPTFDSL---------------LSRDMAGYMPA--- 171
Query: 276 NDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLD 335
R +F E+DN AE L +++F + DS+ +K+ V+ IY RL
Sbjct: 172 ---------------RADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLK 216
Query: 336 ERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISE 392
ER+RRK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 217 ERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALE 276
Query: 393 HRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASR 433
+ I+ L+E R AG A Y LK+ RE E R
Sbjct: 277 FELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKR 317
>sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3
Length = 443
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 149/341 (43%), Gaps = 57/341 (16%)
Query: 98 IKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGI 155
IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P W A +E+ LLE +
Sbjct: 29 IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPSWTAQEEMALLEAV 87
Query: 156 EMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPDMSHVVGKNRKELLAMAKGH 215
G GNW ++A + TKTKE C +HY ++N+P F LL + +
Sbjct: 88 MDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFA------------STLLNLKQAE 135
Query: 216 IDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQTERSSKGKKPVTSG 275
+K + + S P R + + R G P
Sbjct: 136 ------EAKTADTAIPFHSTDDPPRPTFDSL---------------LSRDMAGYMPA--- 171
Query: 276 NDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLD 335
R +F E+DN AE L +++F + DS+ +K+ V+ IY RL
Sbjct: 172 ---------------RADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLK 216
Query: 336 ERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISE 392
ER+RRK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 217 ERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALE 276
Query: 393 HRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASR 433
+ I+ L+E R AG A Y LK+ RE E R
Sbjct: 277 FELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKR 317
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 175/396 (44%), Gaps = 68/396 (17%)
Query: 84 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 142
+C YC D+T +R++C C D +LC +CFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLADVTS-LRLRCTECQDIELCTDCFSAGAEIGNHRRWHGYQLVDGGRFTLWGPEA 66
Query: 143 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFPLPDMS 198
W + +E LLL+ IE +G GNW ++A HVG ++T +EHY +Y++
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYIHG--------- 117
Query: 199 HVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNA 258
+ K I D P++ + T P SPS + P+ A
Sbjct: 118 -----------NLGKACIPDSI-PNRVTDHTCPTGGPLSPS------LTTPLPTLDLTVA 159
Query: 259 DPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEE 318
D Q GY R +++ E+D +AE L++ + D +
Sbjct: 160 DQQQ----------------------LGYMPLRDDYEIEFDQEAETLISGLSVNYDDDDV 197
Query: 319 ERDIKLRVLRIYSKRLDERKRRKDFILERNLL----------YPNPFEKDLSPEERELCR 368
E ++K + +Y ++L ER+RRK + NL+ P ++ +S EE+EL
Sbjct: 198 EVELKEAYVDMYVRKLKERQRRKSLARDYNLVPAFLGKDKKEKEKPAKRKISKEEKELRL 257
Query: 369 RYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREA 428
+ +F S ++ ED + + E +I++L+ R G + E+ Y + RE
Sbjct: 258 KLRPLYQFMSNKEIEDCFENMHKERMLRAKIRELQRYRRNGITKTEESAEYEAARHKREK 317
Query: 429 EEASR---RAKEGGHAGASSQGGANVFMASESLRKD 461
+ ++ +K G G S+ A +A L D
Sbjct: 318 RKENKNIANSKRGREDGKESEFAAIENLAGFELLSD 353
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 168/380 (44%), Gaps = 77/380 (20%)
Query: 84 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 142
+C YC +++ +R +C C D +LC ECFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLAEVS-PLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEA 66
Query: 143 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 196
W + +E LLL+ IE +G GNW ++A HVG ++T + +EHY ++Y++ +PD
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPD 126
Query: 197 MSHVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGL 256
NR H GP P T P P + + E ++
Sbjct: 127 TI----PNR------VTDHTCPSGGPLSPSLTT-----PLPPLDISVAEQQQL------- 164
Query: 257 NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADS 316
GY R +++ EYD DAE L++ + D
Sbjct: 165 -----------------------------GYMPLRDDYEIEYDQDAETLISGLSVNYDDD 195
Query: 317 EEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKD-----------LSPEERE 365
+ E ++K + +Y ++L ER+RRK+ + NL+ P KD ++ EE+E
Sbjct: 196 DVEIELKRAHVDMYVRKLKERQRRKNIARDYNLV-PAFLGKDKKEKEKALKRKITKEEKE 254
Query: 366 LCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRG 425
L + +F S ++ +DL + + E +I++L+ R G E+ Y +
Sbjct: 255 LRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHK 314
Query: 426 REAEE------ASRRAKEGG 439
RE + S+R KE G
Sbjct: 315 REKRKENKNLAGSKRGKEDG 334
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 168/380 (44%), Gaps = 77/380 (20%)
Query: 84 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 142
+C YC +++ +R +C C D +LC ECFS G E+ H+ H Y+++D F L P+
Sbjct: 8 YCVYCLAEVS-PLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEA 66
Query: 143 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 196
W + +E LLL+ IE +G GNW ++A HVG ++T + +EHY ++Y++ +PD
Sbjct: 67 EGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYIHGNLGKACIPD 126
Query: 197 MSHVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGL 256
NR H GP P T P P + + E ++
Sbjct: 127 TI----PNR------VTDHTCPSGGPLSPSLTT-----PLPPLDISVAEQQQL------- 164
Query: 257 NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADS 316
GY R +++ EYD DAE L++ + D
Sbjct: 165 -----------------------------GYMPLRDDYEIEYDQDAETLISGLSVNYDDD 195
Query: 317 EEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKD-----------LSPEERE 365
+ E ++K + +Y ++L ER+RRK+ + NL+ P KD ++ EE+E
Sbjct: 196 DVEIELKRAHVDMYVRKLKERQRRKNIARDYNLV-PAFLGKDKKEKEKALKRKITKEEKE 254
Query: 366 LCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRG 425
L + +F S ++ +DL + + E +I++L+ R G E+ Y +
Sbjct: 255 LRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEYEAARHK 314
Query: 426 REAEE------ASRRAKEGG 439
RE + S+R KE G
Sbjct: 315 REKRKENKNLAGSKRGKEDG 334
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 60/289 (20%)
Query: 84 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD- 142
+C C D+T +RI+CA C D +LC ECFS G E+ H+ H Y+ +D F L P+
Sbjct: 8 YCVNCLADVTN-LRIRCAECQDIELCPECFSAGAEIGNHRRWHGYQQVDGGRFSLWGPEA 66
Query: 143 ---WNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNVYMNSPFFP--LPD 196
W + +E LL+ IE YG GNW ++A HVG ++T + ++HY ++Y++ +PD
Sbjct: 67 EGGWTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYIHGNLGKACIPD 126
Query: 197 MSHVVGKNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGL 256
+ H GP P T P P + + E ++
Sbjct: 127 ----------SIPNRVTDHTCPSGGPLSPSLTT-----PLPPLDITVVEQQQL------- 164
Query: 257 NADPQTERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADS 316
GY R +++ EYD +AE+L++ + D
Sbjct: 165 -----------------------------GYMPLRDDYEIEYDQEAEKLISGLSVNYDDE 195
Query: 317 EEERDIKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEERE 365
+ E ++K + +Y ++L ER+RRK+ + NL+ P +D +ERE
Sbjct: 196 DIEIEMKRAHVDMYVRKLRERQRRKNIARDYNLV-PAFLGRDKKDKERE 243
>sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1
Length = 443
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 85 CNYCNKDITGKIRIKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 142
C C+ +T IKCA C P F LC++CF+ G E H+S+H Y +M + FP++ P
Sbjct: 17 CRGCSSYLTEPY-IKCAECGPPPFFLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPS 74
Query: 143 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFF 192
W A +E+ LLE + G GNW ++A + TKTKE C +HY ++N+P F
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLF 124
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 271 PVTSGNDGP-----SLV--ELSGYNSKRQEFDPEYDNDAEQLLAEMEFKDADSEEERDIK 323
P S +D P SL+ +++GY R +F E+DN AE L +++F + DS+ +K
Sbjct: 145 PFHSADDPPRPAFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALK 204
Query: 324 LRVLRIYSKRLDERKRRKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKE 380
+ V+ IY RL ER+RRK I + L+ F E+ E ++L F R
Sbjct: 205 MAVVDIYHSRLKERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPV 264
Query: 381 DHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASR 433
+H+ +++ E + I+ L+E R AG A Y LK+ RE E R
Sbjct: 265 EHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKR 317
>sp|Q5ZJF3|TAD2A_CHICK Transcriptional adapter 2-alpha OS=Gallus gallus GN=TADA2A PE=2
SV=1
Length = 446
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 85 CNYCNKDITGKIRIKCAVC--PDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICPD 142
C C+ +T +KCA C P F LC++CF+ G E H+S+H Y +M + FP++ P+
Sbjct: 17 CRGCSSYLTEPY-VKCAECGPPPFLLCLQCFTRGFEYKKHQSDHTYEIMTS-DFPVLDPN 74
Query: 143 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFF 192
W A +E+ LLE + G GNW ++A + TK+KE C +HY ++N+P F
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVANQMCTKSKEECEKHYMKHFINNPLF 124
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 283 ELSGYNSKRQEFDPE-YDNDAEQLLAEMEFKDADSEEERDIKLRVLRIYSKRLDERKR-- 339
+++GY R +DN AE L +++F + DS+ +K+ V+ IY R K
Sbjct: 164 DMAGYMPARARLSSRSFDNYAEWDLRDIDFVEDDSDILHALKIAVVDIYHSRFKREKTAG 223
Query: 340 RKDFILERNLLYPNPF---EKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTL 396
RK I + L+ F E+ E ++L F R +H+ +++ E
Sbjct: 224 RKKIIRDHGLINLRKFQILERRYPKEVQDLYETMRRFARILGPVEHDKFIESHALEFELR 283
Query: 397 KRIQDLKEARAAGCRTSAEADRYLELKRGREAEEASR 433
+ I+ L+E RAAG A Y LK+ R+ E R
Sbjct: 284 REIKRLQEYRAAGITNFCSARTYDHLKKTRDEERLKR 320
>sp|Q7KSD8|TAD2A_DROME Transcriptional adapter 2A OS=Drosophila melanogaster GN=Rpb4 PE=1
SV=1
Length = 562
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 151/366 (41%), Gaps = 71/366 (19%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVM-DNLSFPLICPDW 143
C C +T IKC+ C D LC++CFS G E H++NH Y ++ DN+ P W
Sbjct: 96 CATCRCSLTEPY-IKCSECLDTLLCLQCFSRGKEAFSHRNNHAYIIVRDNIQVFADEPHW 154
Query: 144 NADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCI-EHYTNVYMNSPFFPLPDMSHVVG 202
A DE +LL+ + +G GNW +++ + + + + HY + Y F L ++ H
Sbjct: 155 TARDERILLKTLRTHGYGNWEAVSQALDQRHEPAEVRRHYHDCYFGGIFERLLNLKHA-- 212
Query: 203 KNRKELLAMAKGHIDDKKGPSKPGEATVKEESPFSPSRVKIEEMHKVGPSGRGLNADPQT 262
++ V E P+ + +M + P A Q
Sbjct: 213 -----------------------RDSYVPERMPY------VFKMRSLDPPRHDDIASMQF 243
Query: 263 ERSSKGKKPVTSGNDGPSLVELSGYNSKRQEFDPEYDNDAEQLLAEM--------EFKDA 314
S +GY R +FD YD AE LL+ M + + +
Sbjct: 244 RLS-------------------AGYRCARGDFDTPYDTSAESLLSIMVDHRGRDDDNEAS 284
Query: 315 DSEEERDI----KLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLSPEEREL---- 366
+SE ER++ +L ++R Y+ RL ER+RR + + L+ PN +S
Sbjct: 285 ESEFEREVTEELQLGLVRAYNNRLRERQRRYKIMRQHGLIMPNRTVSWISKYVHAFGSDA 344
Query: 367 -CRRYDVFMRFHSKEDHEDLLQTVISEHRTL-KRIQDLKEARAAGCRTSAEADRYLELKR 424
C R+ FM+ D+L + +R L ++ L + R G RT + A Y L +
Sbjct: 345 SCMRFLGFMQICPDPIKFDMLLESLRYYRELHSQLHKLYDLREHGVRTLSGAKLYARLSK 404
Query: 425 GREAEE 430
R+ +
Sbjct: 405 ERQQAQ 410
>sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1
SV=3
Length = 985
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 77 EGKRALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 136
EG YHCN C+ D + K R C DFDLC ECF+ G S+ +M+
Sbjct: 302 EGPAVEYHCNSCSADCSRK-RYHCPKQADFDLCTECFNSGKFSSDMSSSDFI-LMEPAEA 359
Query: 137 PLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPFFPLPD 196
P + D E LLL NW EIAEHV TKTK C+ H+ + + F D
Sbjct: 360 PGVGSGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQID 419
Query: 197 MSHVVGKNRKEL 208
+ K+ +L
Sbjct: 420 YKDPISKDTTDL 431
>sp|Q9XI07|SWI3C_ARATH SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1
SV=1
Length = 807
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 84 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF--PLICP 141
HCN+C++ + + + D LC +CF G V H RV D + F
Sbjct: 344 HCNHCSRPLP-TVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRV-DPMKFYGDQDGD 401
Query: 142 DWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHY 182
+W + +LLLE +E+Y NW +IA+HVG+K+K CI H+
Sbjct: 402 NWTDQETLLLLEAVELYN-ENWVQIADHVGSKSKAQCILHF 441
>sp|O14470|SSR2_SCHPO SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3
Length = 503
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 143 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPF 191
W+ + +LLLE IE YG +W +IA HVG++TKE C+ H+ + + P+
Sbjct: 250 WSNQETLLLLEAIETYG-DDWNQIALHVGSRTKEQCLIHFLQIPIEDPY 297
>sp|Q54J55|MYBX_DICDI Myb-like protein X OS=Dictyostelium discoideum GN=mybX PE=3 SV=1
Length = 1620
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 79 KRALYHCNYCNKD--------ITGKIRIKCAVCPDF----DLCIECFSVGVEVHPHKSNH 126
K+ L+ C C D + + + P++ +C+ CFS G + +S+
Sbjct: 857 KKPLFECKKCKADCSNVRYQLVNNSTALDGNILPEYFYPMIICVNCFSSGNYENFIQSSS 916
Query: 127 PYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVG-TKTKELCIEHYTNV 185
R+ + W + +LLLEGIE++ NW EI++++G +KT E C+ H+ +
Sbjct: 917 FQRIEQHQPEEF---GWTDIETLLLLEGIEIFR-DNWQEISDYIGGSKTPEQCLTHFIRL 972
Query: 186 YMNSPFFPLPDMSHVVGKNRKELLAMAKGHID 217
+ F S VG +++K ID
Sbjct: 973 PIEDEFLERKISSFPVG-------SLSKKEID 997
>sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 PE=1
SV=2
Length = 1697
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSV-GVEVHPHK-SNHP 127
CN C+ DI +C VCPD+D+C CFS G HPHK +NHP
Sbjct: 1524 CNACHLDIETGQGWRCEVCPDYDVCNACFSRDGGVNHPHKLTNHP 1568
>sp|O13788|SSR1_SCHPO SWI/SNF and RSC complexes subunit ssr1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssr1 PE=1 SV=1
Length = 527
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 84 HCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPL---IC 140
HC YC + + + +++CI C+ ++ P + D + I
Sbjct: 236 HC-YCCGNKFNESYYQSQTAQKYNVCISCY------QQNRFPSPTTIADYKEVAIQNKIE 288
Query: 141 PD--WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNV 185
D W A + +LL EG+EMY +WA++A HV TK+ E CI + N+
Sbjct: 289 DDDTWTAQELVLLSEGVEMYS-DDWAKVASHVNTKSVEECILKFLNL 334
>sp|P43609|RSC8_YEAST Chromatin structure-remodeling complex protein RSC8
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC8 PE=1 SV=1
Length = 557
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 82 LYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSFPLICP 141
+Y C+ C + + +R D +LC CF G +S+ R+ +N + +
Sbjct: 257 VYICHTCGNE-SINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRLENNGNS--VKK 313
Query: 142 DWNADDEILLLEGIEMYGLGNWAEIAEHVGT-KTKELCIEHYTNV 185
+W+ + +LLLEGIEMY W +IA+HVG K E CIE + ++
Sbjct: 314 NWSDQEMLLLLEGIEMYE-DQWEKIADHVGGHKRVEDCIEKFLSL 357
>sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12 OS=Arabidopsis thaliana GN=HAC12 PE=2
SV=2
Length = 1706
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSV-GVEVHPHK-SNHP 127
CN C+ DI + +C VCPD+D+C C+ G HPHK + HP
Sbjct: 1533 CNVCHLDIESGLGWRCEVCPDYDVCNACYKKEGCINHPHKLTTHP 1577
>sp|B9G2A8|BIG_ORYSJ Auxin transport protein BIG OS=Oryza sativa subsp. japonica
GN=Os09g0247700 PE=2 SV=1
Length = 4965
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
Query: 5 LSVVLVVAFQEILTFASKQALVIVSSLNFEKNMGRS---RGNFHANDEDPTQRSRRKKNV 61
+SV VA + L FA +A+ SSL + + AND+ P ++
Sbjct: 2391 VSVAPAVALLKKLLFAPYEAVQTSSSLAISSRFLQVPFPKQTMIANDDAPDNHAKASAAS 2450
Query: 62 SSDNSDTAAPGQGAGEGKRALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSV---GVE 118
+S + + Y C+ C+ + R C +CPDFDLC C+ +
Sbjct: 2451 NSTTGNAQVMIEEDPATSSVQYCCDGCSTVPILRRRWHCNICPDFDLCETCYEILDADRL 2510
Query: 119 VHPHKSNHP 127
PH +HP
Sbjct: 2511 PAPHSRDHP 2519
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 143 WNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYM 187
W ++ I L GI+++G G W EIA+ VGT+T H Y+
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQFVGTRTPTQIQSHAQKYYL 423
>sp|Q54QG5|Y3893_DICDI Probable E3 ubiquitin-protein ligase DDB_G0283893 OS=Dictyostelium
discoideum GN=DDB_G0283893 PE=3 SV=2
Length = 5875
Score = 43.1 bits (100), Expect = 0.005, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 5 LSVVLVVAFQEILTFASKQALVIVSSLNFEKNMGRSRGNFHANDEDPTQRSRRKKNVSSD 64
S L+ + L S + + SSL + +S N + P S +NV D
Sbjct: 3151 FSTDLIFTLLKSLLSHSNEIIRTRSSLILVSFISKSGNNSTVANLLPPPSSSSNENVV-D 3209
Query: 65 NSDTAAPGQGAGEG-KRALYHCNYCNKD-ITGKIRIKCAVCPDFDLCIECFSVGVEVHP 121
N +T +G + L+ C+ CN + ITGK R C+ C DFDLC +C+ + HP
Sbjct: 3210 NDNTNKENEGDIQMVDEVLFSCDLCNINPITGK-RWNCSNCGDFDLCNQCYQNPEKDHP 3267
>sp|Q84JG2|SWI3B_ARATH SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1
SV=1
Length = 469
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 24/117 (20%)
Query: 84 HCNYCNKDITGKIRIKCAVCPDFDL--CIECFSVGVEVHPHKSNHPYRVMDNLS-FPLI- 139
+CN C I C C +DL C C+ +SN YRV N S F +
Sbjct: 174 NCNGCK----AICSIACFACDKYDLTLCARCYV--------RSN--YRVGINSSEFKRVE 219
Query: 140 -----CPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHYTNVYMNSPF 191
P+W+ + +LLLE + YG +W ++A HV +T++ C+ + + F
Sbjct: 220 ISEESKPEWSDKEILLLLEAVMHYG-DDWKKVASHVIGRTEKDCVSQFVKLPFGEQF 275
>sp|Q5RBA5|SQSTM_PONAB Sequestosome-1 OS=Pongo abelii GN=SQSTM1 PE=2 SV=1
Length = 440
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 15/67 (22%)
Query: 75 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRV 130
A E R + H C+ CN + G R KC+VCPD+DLC C G+ +R
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL----------HRG 162
Query: 131 MDNLSFP 137
L+FP
Sbjct: 163 HTKLAFP 169
>sp|Q64337|SQSTM_MOUSE Sequestosome-1 OS=Mus musculus GN=Sqstm1 PE=1 SV=1
Length = 442
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 75 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGV 117
A E R + H C+ CN + G R KC+VCPD+DLC C G+
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL 159
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 138
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q13501|SQSTM_HUMAN Sequestosome-1 OS=Homo sapiens GN=SQSTM1 PE=1 SV=1
Length = 440
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 15/67 (22%)
Query: 75 AGEGKRALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRV 130
A E R + H C+ CN + G R KC+VCPD+DLC C G+ +R
Sbjct: 114 AQEAPRNMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL----------HRG 162
Query: 131 MDNLSFP 137
L+FP
Sbjct: 163 HTKLAFP 169
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 138
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR-VMDNLSFPL 138
C+ C K R KC +C D+DLC C+ G H ++HP + ++ + F L
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDL 63
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVM 131
C+ C K R KC +C D+DLC C+ G H ++HP + +
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCI 55
>sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B OS=Drosophila melanogaster GN=Dys PE=1 SV=3
Length = 1669
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 127
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 1284 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 1326
>sp|Q9LE42|HAC5_ARATH Histone acetyltransferase HAC5 OS=Arabidopsis thaliana GN=HAC5 PE=2
SV=1
Length = 1670
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPH 122
C C +++ +C VCPD+D+C C+S G+ HPH
Sbjct: 1504 CAICQQELETAQGWRCEVCPDYDVCNACYSKGIN-HPH 1540
>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophila melanogaster GN=Dys PE=1
SV=3
Length = 3598
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 127
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 3112 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 3154
>sp|Q8BP86|SNPC4_MOUSE snRNA-activating protein complex subunit 4 OS=Mus musculus
GN=Snapc4 PE=2 SV=2
Length = 1333
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 129 RVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEIAEHVGTKTKELCIEHY 182
R + L F L WNA +E L++ IE YG+G+WA IA + ++ C+ +
Sbjct: 442 RYIRRLHFSLKKGRWNAKEEQQLIQLIEKYGVGHWARIASELPHRSGSQCLSKW 495
>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1854
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 127
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 1469 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 1511
>sp|O08623|SQSTM_RAT Sequestosome-1 OS=Rattus norvegicus GN=Sqstm1 PE=1 SV=1
Length = 439
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 80 RALYH----CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGV 117
R++ H C+ CN + G R KC+VCPD+DLC C G+
Sbjct: 116 RSMVHPNVICDGCNGPVVG-TRYKCSVCPDYDLCSVCEGKGL 156
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2 SV=1
Length = 383
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVM 131
C+ C K R KC +C D+DLC C+ G H + HP + +
Sbjct: 9 CDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCI 55
>sp|Q9TW65|DMD_CAEEL Dystrophin-1 OS=Caenorhabditis elegans GN=dys-1 PE=1 SV=2
Length = 3674
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYR 129
CN C IR +C C + DLC CF H++NHP +
Sbjct: 3306 CNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAKSHRTNHPMQ 3350
>sp|Q7YU29|DMDE_DROME Dystrophin, isoform E OS=Drosophila melanogaster GN=Dys PE=1 SV=1
Length = 1051
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 127
CN C + R +C C +FD+C +CF G HK HP
Sbjct: 666 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHP 708
>sp|Q5SSH7|ZZEF1_MOUSE Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Mus
musculus GN=Zzef1 PE=1 SV=2
Length = 2924
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 83 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNH 126
+ C++C I G+ R+ C VC DFDLC C++ + H H
Sbjct: 1828 FTCDHCQGLIIGR-RMNCNVCDDFDLCYGCYTAKKYSYGHLPTH 1870
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 136
C+ C+ +I R +C C D DLC CF GV+ H +H M N+ F
Sbjct: 1781 CDGCD-EIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHE---MVNMEF 1828
>sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG OS=Arabidopsis thaliana GN=BIG PE=1 SV=2
Length = 5098
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 83 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVH----PHKSNHP 127
Y C+ C+ + R C VCPDFDLC C+ V ++ PH +HP
Sbjct: 2616 YCCDGCSTVPILRRRWHCTVCPDFDLCEACYEV-LDADRLPPPHTRDHP 2663
>sp|O43149|ZZEF1_HUMAN Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Homo
sapiens GN=ZZEF1 PE=1 SV=6
Length = 2961
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 83 YHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNH 126
+ C++C I G+ R+ C VC DFDLC C++ + H H
Sbjct: 1830 FTCDHCQGLIIGR-RMNCNVCDDFDLCYGCYAAKKYSYGHLPTH 1872
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 85 CNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHPYRVMDNLSF 136
C+ C+ +I R +C C D DLC CF GV+ H +H M N+ F
Sbjct: 1783 CDGCD-EIAPWHRYRCLQCSDMDLCKTCFLGGVKPEGHGDDHE---MVNMEF 1830
>sp|A2CJ06|DYTN_HUMAN Dystrotelin OS=Homo sapiens GN=DYTN PE=2 SV=1
Length = 578
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 85 CNYCNK-DITGKIRIKCAVCPDFDLCIECFSVGVEVHPHKSNHP 127
C C ITG +R +C C +FD+C CF G+ H+ +HP
Sbjct: 228 CTLCRTFPITG-LRYRCLKCLNFDICQMCFLSGLHSKSHQKSHP 270
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 39.3 bits (90), Expect = 0.071, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 80 RALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHK 123
R +Y CN C + + R C VC D+DLCI C++ + H HK
Sbjct: 1702 RFVYTCNECKHHV--ETRWHCTVCEDYDLCINCYN--TKSHAHK 1741
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 39.3 bits (90), Expect = 0.076, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 80 RALYHCNYCNKDITGKIRIKCAVCPDFDLCIECFSVGVEVHPHK 123
R +Y CN C + + R C VC D+DLCI C++ + H HK
Sbjct: 1703 RFVYTCNECKHHV--ETRWHCTVCEDYDLCINCYN--TKSHTHK 1742
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,805,222
Number of Sequences: 539616
Number of extensions: 8693852
Number of successful extensions: 24446
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 24180
Number of HSP's gapped (non-prelim): 367
length of query: 497
length of database: 191,569,459
effective HSP length: 122
effective length of query: 375
effective length of database: 125,736,307
effective search space: 47151115125
effective search space used: 47151115125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)