Your job contains 1 sequence.
>010937
MADEEERVLENQLEQQLNEQRDSLTALNDAVASDPFNPELQEVLKELVQAIKDAEEGLFH
LKRARLLREADLVLHGCSSRTEDVQAEPLDPADVEPEPLEDQRYSVGSKCRFRYNDGRWY
DGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVP
TSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTLSE
YAQMSDEEDSDFSSEQSDSSDYEEDSPHGVGFDESNNLKRGVRNDTVVFAKWENHTRGIA
SKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSKEGKDEKQRKKRSR
GGRRKREKKFAEAVRAARDEEESRPDVFSLINNQLRVHHETINGSSPKMQQHKGSVKEKK
ISRRDLVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQAS
ASHEVSSREKEKRWLKF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010937
(497 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2047319 - symbol:AT2G24830 species:3702 "Arabi... 1190 5.8e-121 1
UNIPROTKB|C0HAV3 - symbol:zgpat "Zinc finger CCCH-type wi... 165 7.6e-21 3
UNIPROTKB|Q8N5A5 - symbol:ZGPAT "Zinc finger CCCH-type wi... 260 5.9e-20 1
RGD|1310801 - symbol:Zgpat "zinc finger, CCCH-type with G... 256 1.5e-19 1
RGD|1562795 - symbol:Lime1 "Lck interacting transmembrane... 256 2.5e-19 1
UNIPROTKB|Q28H71 - symbol:zgpat "Zinc finger CCCH-type wi... 158 5.5e-18 2
MGI|MGI:2449939 - symbol:Zgpat "zinc finger, CCCH-type wi... 238 2.1e-17 1
UNIPROTKB|Q17QX2 - symbol:ZGPAT "Zinc finger CCCH-type wi... 149 2.9e-17 2
FB|FBgn0032169 - symbol:CG4709 species:7227 "Drosophila m... 165 5.2e-17 2
UNIPROTKB|C5IJB0 - symbol:ZGPAT "Zinc finger CCCH-type wi... 147 7.7e-17 2
ZFIN|ZDB-GENE-040426-1248 - symbol:zgpat "zinc finger, CC... 147 9.3e-17 2
UNIPROTKB|Q5U4Z3 - symbol:zgpat "Zinc finger CCCH-type wi... 156 1.8e-16 2
UNIPROTKB|I3LV51 - symbol:ZGPAT "Uncharacterized protein"... 152 4.0e-16 2
UNIPROTKB|F1PAI4 - symbol:ZGPAT "Uncharacterized protein"... 150 1.0e-15 2
WB|WBGene00016383 - symbol:C33H5.17 species:6239 "Caenorh... 135 1.1e-11 2
UNIPROTKB|E1C285 - symbol:ZGPAT "Uncharacterized protein"... 137 5.3e-11 2
UNIPROTKB|Q0IIX9 - symbol:tfip11 "Tuftelin-interacting pr... 128 9.1e-05 1
ZFIN|ZDB-GENE-040718-479 - symbol:tfip11 "tuftelin intera... 128 9.2e-05 1
UNIPROTKB|Q66J74 - symbol:tfip11 "Tuftelin-interacting pr... 127 0.00012 1
UNIPROTKB|F1RG71 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|Q06AK6 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|Q29RR5 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|A1XD97 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|Q9UBB9 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|A1XD93 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|A1XD94 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|A1XD95 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|A4UMC5 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
UNIPROTKB|Q5R5K8 - symbol:TFIP11 "Tuftelin-interacting pr... 123 0.00033 1
RGD|1311449 - symbol:Tfip11 "tuftelin interacting protein... 123 0.00033 1
MGI|MGI:1930075 - symbol:Tfip11 "tuftelin interacting pro... 123 0.00033 1
UNIPROTKB|Q5ZII9 - symbol:TFIP11 "Tuftelin-interacting pr... 122 0.00041 1
UNIPROTKB|A4UMC6 - symbol:TFIP11 "Tuftelin-interacting pr... 122 0.00042 1
UNIPROTKB|F1MR60 - symbol:TFIP11 "Tuftelin-interacting pr... 122 0.00042 1
>TAIR|locus:2047319 [details] [associations]
symbol:AT2G24830 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AC006585 EMBL:AK229189
IPI:IPI00541583 PIR:A84641 RefSeq:NP_180056.1 UniGene:At.22189
UniGene:At.69630 ProteinModelPortal:Q9SK49 SMR:Q9SK49
EnsemblPlants:AT2G24830.1 GeneID:817020 KEGG:ath:AT2G24830
TAIR:At2g24830 eggNOG:NOG241375 HOGENOM:HOG000239565
InParanoid:Q9SK49 OMA:GYREGMG PhylomeDB:Q9SK49
ProtClustDB:CLSN2683135 Genevestigator:Q9SK49 Uniprot:Q9SK49
Length = 497
Score = 1190 (424.0 bits), Expect = 5.8e-121, P = 5.8e-121
Identities = 245/487 (50%), Positives = 312/487 (64%)
Query: 22 DSLTALNDAVASDPFNPELQEVLKELVQAIKDAEEGLFHLKRARLLREADLVLHGCSSRT 81
+SL+++++A+ SDP NPEL V +EL+ AIK+ EEGL HLKRARLL EAD+VL+G +
Sbjct: 22 ESLSSIDEALLSDPSNPELLSVHEELLSAIKEVEEGLLHLKRARLLEEADIVLNGLN--- 78
Query: 82 EDVQAEPLDPADVEPEPLEDQRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPT 141
D +P +EPE E+++ GSKCRFR+ DGRWY+GRIIG E +DSAK+SFL PT
Sbjct: 79 HDAGVKP---EHLEPEKTEEKKDLDGSKCRFRHTDGRWYNGRIIGFEGSDSAKISFLTPT 135
Query: 142 SENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVG 201
SE+M++CKFF+QQRCRFG++CR SHG+DVP+S LK Y T W+Q +VGS IWA+S K
Sbjct: 136 SESMMICKFFMQQRCRFGSSCRSSHGLDVPISSLKNYEQTEWKQLMVGSKIWAVSGSKYD 195
Query: 202 IWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTLSEYAQMXXXXX----------XX 251
IWRKAEL SWDDE ++G VVFRDD SSAKLG +++ LSEYAQM
Sbjct: 196 IWRKAELESWDDELQVGGVVFRDDKSSAKLGSDSLALSEYAQMTDDDGEEEEEEDEQQSA 255
Query: 252 XXXXXXXXXXXXXXXPHGVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYRE 311
P G+GF ES NL RGV+ DT +FAKWENHTRGIASKMMA+MGYRE
Sbjct: 256 SDSEDSVSSDYDEGSPQGIGFLESTNLPRGVQTDTALFAKWENHTRGIASKMMASMGYRE 315
Query: 312 GMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSKEGKDXXXXXXXXXXXXXXXXXXXX 371
GMGLG SGQGIL+P+ VKVLP K+SLD+A+E ++ E K
Sbjct: 316 GMGLGVSGQGILNPILVKVLPAKRSLDYALEHIRNGECKSEKQKKKRSRGGKRKRGKKFA 375
Query: 372 XXXXXXXXXXXXXPDVFSLINNQL-RVHHETINGSSPKMQQHKGSVKEKKISRRDLVAYD 430
PD+FSLIN Q+ HE ++ S K +Q+KG V R+ LV Y
Sbjct: 376 EAAKAAKQEEESKPDLFSLINEQIFPTRHEKVHSESVKNRQNKGPV-----DRKALVEYQ 430
Query: 431 DEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKXXXXXXXXXXXXXXXXXXREK 490
DE++DL++ ++KLE+MVNRNK + V EAA R+L E RK +E
Sbjct: 431 DEVRDLKLEMLKLEQMVNRNKKDLVVSEAATRRLKEVRKALASTLACQAAASNAIVSKEN 490
Query: 491 EKRWLKF 497
EK+WLKF
Sbjct: 491 EKKWLKF 497
>UNIPROTKB|C0HAV3 [details] [associations]
symbol:zgpat "Zinc finger CCCH-type with G patch
domain-containing protein" species:8030 "Salmo salar" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0007175 CTD:84619 EMBL:BT059459 RefSeq:NP_001167239.1
UniGene:Ssa.42847 GeneID:100380483 Uniprot:C0HAV3
Length = 527
Score = 165 (63.1 bits), Expect = 7.6e-21, Sum P(3) = 7.6e-21
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 76 GCSS--RTEDVQAEPLDPADVEPEPLEDQRYSVGSKCRFRYNDGRWYDGRIIGLEETD-- 131
G SS R + + E D +VE E V + R + +++ I+G E D
Sbjct: 101 GSSSDMREREDEREEEDDGEVEGEVDALSGTKVRAPYRTSWGTLEYHNAMIVGTESCDRN 160
Query: 132 --SAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVG 189
+V ++ PT ++M C FFL+ +CRF NCR SHG V +S L++++ + G
Sbjct: 161 EAQVRVLYVHPTQKSMKPCPFFLEDKCRFADNCRFSHGEVVYVSELREFLESDLTNLQEG 220
Query: 190 STIWALSDDKVGIWRKAELGSWDDE 214
S+ A DD GIW ++ D++
Sbjct: 221 SSCLARQDD--GIWYSGKITDIDND 243
Score = 151 (58.2 bits), Expect = 7.6e-21, Sum P(3) = 7.6e-21
Identities = 30/59 (50%), Positives = 36/59 (61%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSK 347
F WE HTRGI SK+M MGY G GLG + +G ++PV VLP +SLD EL K
Sbjct: 310 FGGWEAHTRGIGSKLMLKMGYEYGKGLGKTSEGRVEPVLAVVLPKGKSLDQCAELTARK 368
Score = 43 (20.2 bits), Expect = 7.6e-21, Sum P(3) = 7.6e-21
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 34 DPFNP-ELQEVLKELVQAIKDAEEGLFHLKRARLL 67
DP +L ++ ++L Q I+ E L +K++RLL
Sbjct: 29 DPSQQADLLKLKEDLSQLIELTEASLVSVKKSRLL 63
>UNIPROTKB|Q8N5A5 [details] [associations]
symbol:ZGPAT "Zinc finger CCCH-type with G patch
domain-containing protein" species:9606 "Homo sapiens" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103
PROSITE:PS50174 SMART:SM00356 SMART:SM00443 GO:GO:0005634
EMBL:CH471077 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 EMBL:AL121845
eggNOG:NOG241375 GO:GO:0007175 CTD:84619 OMA:AWGTLEY
OrthoDB:EOG4J6RR2 EMBL:AB058750 EMBL:AK027878 EMBL:AK074961
EMBL:BC019338 EMBL:BC032612 IPI:IPI00553175 IPI:IPI00641397
IPI:IPI00719070 RefSeq:NP_001076582.1 RefSeq:NP_001182582.1
RefSeq:NP_001182583.1 RefSeq:NP_115916.3 RefSeq:NP_852150.2
UniGene:Hs.590868 ProteinModelPortal:Q8N5A5 SMR:Q8N5A5
IntAct:Q8N5A5 STRING:Q8N5A5 PhosphoSite:Q8N5A5 DMDM:147744602
PaxDb:Q8N5A5 PRIDE:Q8N5A5 DNASU:84619 Ensembl:ENST00000328969
Ensembl:ENST00000355969 Ensembl:ENST00000357119
Ensembl:ENST00000369967 Ensembl:ENST00000431125
Ensembl:ENST00000448100 GeneID:84619 KEGG:hsa:84619 UCSC:uc002ygi.2
UCSC:uc002ygk.3 UCSC:uc002ygm.3 GeneCards:GC20P062338
H-InvDB:HIX0138076 HGNC:HGNC:15948 HPA:HPA043248 neXtProt:NX_Q8N5A5
PharmGKB:PA134881248 HOVERGEN:HBG056371 InParanoid:Q8N5A5
PhylomeDB:Q8N5A5 ChiTaRS:ZGPAT GenomeRNAi:84619 NextBio:74496
ArrayExpress:Q8N5A5 Bgee:Q8N5A5 CleanEx:HS_ZGPAT
Genevestigator:Q8N5A5 GermOnline:ENSG00000197114 Uniprot:Q8N5A5
Length = 531
Score = 260 (96.6 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 93/320 (29%), Positives = 131/320 (40%)
Query: 52 KDAEEGLFHLKRARLLREADLVLHGCSSRT-EDVQAEPLDPAD-VEPEPLEDQRYSVGSK 109
+DAE F + EA G S T +A P A E E ED+ G+K
Sbjct: 75 EDAEYQAFREAITEAV-EAPAAARGSGSETVPKAEAGPESAAGGQEEEEGEDEEELSGTK 133
Query: 110 CRFRYNDG----RWYDGRIIGLEETD--SA--KVSFLRPTSENMLMCKFFLQQRCRFGTN 161
Y +++ ++G EE + SA +V +L PT +++ C FFL+ +CRF N
Sbjct: 134 VSAPYYSSWGTLEYHNAMVVGTEEAEDGSAGVRVLYLYPTHKSLKPCPFFLEGKCRFKEN 193
Query: 162 CRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWD--------D 213
CR SHG V L L+ + GS A D G+W A + D D
Sbjct: 194 CRFSHGQVVSLDELRPFQDPDLSSLQAGSACLAKHQD--GLWHAARITDVDNGYYTVKFD 251
Query: 214 EHRMGEVVFRDDGSSAKLGIEAMTL-SEYAQMXXXXXXXXXXXXXXXXXXXXXXPHGVGF 272
+ E V DG L EA S+ +
Sbjct: 252 SLLLREAVVEGDGILPPLRTEATESDSDSDGTGDSSYARVVGSDAVDSAQSSALCPSLAV 311
Query: 273 DESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLP 332
S+ + G + FA WE HTRGI S+++ MGY G GLG +G ++P+ VLP
Sbjct: 312 VGSDAVDSGTCSSA--FAGWEVHTRGIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLP 369
Query: 333 PKQSLDHAVEL--HQSKEGK 350
+SLD VE Q++ GK
Sbjct: 370 RGKSLDQCVETLQKQTRVGK 389
>RGD|1310801 [details] [associations]
symbol:Zgpat "zinc finger, CCCH-type with G patch domain"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;ISS] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 RGD:1310801 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG241375 GO:GO:0007175 CTD:84619
GeneTree:ENSGT00390000000732 HOGENOM:HOG000231955 EMBL:BC087720
IPI:IPI00196430 RefSeq:NP_001009656.1 UniGene:Rn.8219
Ensembl:ENSRNOT00000019084 GeneID:296478 KEGG:rno:296478
UCSC:RGD:1310801 NextBio:641268 ArrayExpress:Q5PPF5
Genevestigator:Q5PPF5 Uniprot:Q5PPF5
Length = 507
Score = 256 (95.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 87/307 (28%), Positives = 129/307 (42%)
Query: 52 KDAEEGLFHLKRARLLREADLVLHGCSSRT---EDVQAEPLDPADVEPEPLEDQRYSVGS 108
++ +E +L + + E V G S+T +VQ P A E E D G+
Sbjct: 68 QEHQEDAEYLAFQKAIAEEAPVDPGNDSKTVPGSEVQPTPTSSALEEEEEDPDLEDLSGA 127
Query: 109 KCRFRYNDG----RWYDGRIIGLEETD--SA--KVSFLRPTSENMLMCKFFLQQRCRFGT 160
K Y +++ ++G EE + SA +V +L PT +++ C FFL+ +CRF
Sbjct: 128 KVNAPYYSAWGTLEYHNAMVVGAEEAEDGSACVRVLYLYPTHKSLKPCPFFLEGKCRFKE 187
Query: 161 NCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEV 220
NCR SHG V + L+ + GS A D G+W A + D+ G
Sbjct: 188 NCRFSHGQLVSVDELRPFQDPDLSLLQTGSACLAKHQD--GLWHPARITDVDN----GYY 241
Query: 221 VFRDDGSSAKLGIEAMTLSEYAQMXXXXXXXXXXXXXXXXXXXXXXPHGVGFDESNNLKR 280
+ D K EA+ + V E+N +
Sbjct: 242 TVKFDSLLLK---EAVVEGDSILPPLRTEATDSSDSDTGDASDSSYARVV---EANTVDT 295
Query: 281 GVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHA 340
G + FA WE HTRGI SK++ MGY G GLG +G ++P+ VLP +SLD
Sbjct: 296 GTCSSA--FAGWEVHTRGIGSKLLVKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQC 353
Query: 341 VELHQSK 347
E+ Q K
Sbjct: 354 AEILQKK 360
>RGD|1562795 [details] [associations]
symbol:Lime1 "Lck interacting transmembrane adaptor 1"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0014066 "regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISO] [GO:0019815 "B
cell receptor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0042345 "regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043405 "regulation of
MAP kinase activity" evidence=ISO] [GO:0050853 "B cell receptor
signaling pathway" evidence=ISO] [GO:0051279 "regulation of release
of sequestered calcium ion into cytosol" evidence=ISO]
InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103
PROSITE:PS50174 SMART:SM00356 SMART:SM00443 RGD:1562795
GO:GO:0005634 GO:GO:0045892 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0007175 IPI:IPI00567000
Ensembl:ENSRNOT00000046276 UCSC:RGD:1562795 ArrayExpress:F1LW37
Uniprot:F1LW37
Length = 610
Score = 256 (95.2 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 87/307 (28%), Positives = 129/307 (42%)
Query: 52 KDAEEGLFHLKRARLLREADLVLHGCSSRT---EDVQAEPLDPADVEPEPLEDQRYSVGS 108
++ +E +L + + E V G S+T +VQ P A E E D G+
Sbjct: 90 QEHQEDAEYLAFQKAIAEEAPVDPGNDSKTVPGSEVQPTPTSSALEEEEEDPDLEDLSGA 149
Query: 109 KCRFRYNDG----RWYDGRIIGLEETD--SA--KVSFLRPTSENMLMCKFFLQQRCRFGT 160
K Y +++ ++G EE + SA +V +L PT +++ C FFL+ +CRF
Sbjct: 150 KVNAPYYSAWGTLEYHNAMVVGAEEAEDGSACVRVLYLYPTHKSLKPCPFFLEGKCRFKE 209
Query: 161 NCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEV 220
NCR SHG V + L+ + GS A D G+W A + D+ G
Sbjct: 210 NCRFSHGQLVSVDELRPFQDPDLSLLQTGSACLAKHQD--GLWHPARITDVDN----GYY 263
Query: 221 VFRDDGSSAKLGIEAMTLSEYAQMXXXXXXXXXXXXXXXXXXXXXXPHGVGFDESNNLKR 280
+ D K EA+ + V E+N +
Sbjct: 264 TVKFDSLLLK---EAVVEGDSILPPLRTEATDSSDSDTGDASDSSYARVV---EANTVDT 317
Query: 281 GVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHA 340
G + FA WE HTRGI SK++ MGY G GLG +G ++P+ VLP +SLD
Sbjct: 318 GTCSSA--FAGWEVHTRGIGSKLLVKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQC 375
Query: 341 VELHQSK 347
E+ Q K
Sbjct: 376 AEILQKK 382
>UNIPROTKB|Q28H71 [details] [associations]
symbol:zgpat "Zinc finger CCCH-type with G patch
domain-containing protein" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103
PROSITE:PS50174 SMART:SM00356 SMART:SM00443 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241375 GO:GO:0007175
CTD:84619 HOGENOM:HOG000231955 EMBL:CR761014 EMBL:BC167358
EMBL:BC171133 EMBL:BC171135 RefSeq:NP_001016444.1 UniGene:Str.2135
ProteinModelPortal:Q28H71 GeneID:549198 KEGG:xtr:549198
Xenbase:XB-GENE-6257472 Bgee:Q28H71 Uniprot:Q28H71
Length = 514
Score = 158 (60.7 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSKE 348
F WE HTRGI SK++A MGY G GLG + +G ++P+ +LP +SLD +E+ Q K+
Sbjct: 308 FGGWEAHTRGIGSKLLARMGYEIGKGLGRNAEGRVEPIQAVLLPKGKSLDQCIEMQQRKK 367
Score = 135 (52.6 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 40/124 (32%), Positives = 59/124 (47%)
Query: 93 DVEPEPLEDQRYSVGSKCRFRYND--G--RWYDGRIIGLEETDSA----KVSFLRPTSEN 144
D E E E++ S G K + Y G +++ ++G E+ + +V +L PT +
Sbjct: 114 DSEEEE-EEEDGSSGMKVKAPYYSTWGTLEYHNAMVVGSEQLEDGEAGVRVLYLYPTHKA 172
Query: 145 MLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWR 204
M C FFL +CRF +CR SHG V L+ L+ + VGS A D GIW
Sbjct: 173 MKPCPFFLDGKCRFDDSCRFSHGQVVALAELQPFAEADVASLAVGSPCLAQHSD--GIWY 230
Query: 205 KAEL 208
A +
Sbjct: 231 PARI 234
Score = 61 (26.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 92 ADVEPEPLED-QRYSVGSKCRFRYNDGRWYDGRIIGLE 128
A+++P D +VGS C +++DG WY RI ++
Sbjct: 201 AELQPFAEADVASLAVGSPCLAQHSDGIWYPARITDIK 238
>MGI|MGI:2449939 [details] [associations]
symbol:Zgpat "zinc finger, CCCH-type with G patch domain"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 MGI:MGI:2449939 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 UniGene:Mm.87720 GO:GO:0007175 EMBL:CH466626
GermOnline:ENSMUSG00000027582 EMBL:AL928965 CTD:84619
GeneTree:ENSGT00390000000732 HOGENOM:HOG000231955 OMA:AWGTLEY
HOVERGEN:HBG056371 EMBL:AK173276 EMBL:AK041491 EMBL:AK049764
EMBL:AK052236 EMBL:AK159801 EMBL:BC021513 EMBL:BC027218
IPI:IPI00123482 RefSeq:NP_001041613.1 RefSeq:NP_659143.1
UniGene:Mm.272712 ProteinModelPortal:Q8VDM1 SMR:Q8VDM1
PhosphoSite:Q8VDM1 PRIDE:Q8VDM1 Ensembl:ENSMUST00000029105
Ensembl:ENSMUST00000108807 Ensembl:ENSMUST00000116366 GeneID:229007
KEGG:mmu:229007 UCSC:uc008omb.1 InParanoid:Q69Z90 NextBio:379311
Bgee:Q8VDM1 CleanEx:MM_ZGPAT Genevestigator:Q8VDM1 Uniprot:Q8VDM1
Length = 511
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 78/273 (28%), Positives = 113/273 (41%)
Query: 83 DVQAEPLDPADVEPEPLEDQRYSVGSKCRFRYNDG----RWYDGRIIGLEETD--SA--K 134
+VQ A E E D G+K Y +++ ++G EE + SA +
Sbjct: 106 EVQPGSTSSALEEEEEDPDLEELSGAKVNAPYYSAWGTLEYHNAMVVGAEEAEDGSACVR 165
Query: 135 VSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWA 194
V +L PT +++ C FFL+ +CRF NCR SHG V + L+ + GS A
Sbjct: 166 VLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQVVSVDELRPFQDPDLSLLQTGSACLA 225
Query: 195 LSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTLSEYAQMXXXXXXXXXX 254
D G+W A + D+ G + D K EA+ +
Sbjct: 226 KHQD--GLWHPARITDVDN----GYYTVKFDSLLLK---EAVVEGDSILPPLRTEATESS 276
Query: 255 XXXXXXXXXXXXPHGVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMG 314
V E + + G + FA WE HTRGI SK++ MGY G G
Sbjct: 277 DSDTGDASDSSYARVV---EPSTVDTGTCSSA--FAGWEVHTRGIGSKLLVKMGYEFGKG 331
Query: 315 LGASGQGILDPVAVKVLPPKQSLDHAVELHQSK 347
LG +G ++P+ VLP +SLD E+ Q K
Sbjct: 332 LGRHAEGRVEPIHAVVLPRGKSLDQCAEILQKK 364
>UNIPROTKB|Q17QX2 [details] [associations]
symbol:ZGPAT "Zinc finger CCCH-type with G patch
domain-containing protein" species:9913 "Bos taurus" [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585
PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356 SMART:SM00443
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241375
GO:GO:0007175 EMBL:BC118131 IPI:IPI00782903 RefSeq:NP_001019685.2
UniGene:Bt.22848 ProteinModelPortal:Q17QX2
Ensembl:ENSBTAT00000045200 GeneID:510866 KEGG:bta:510866 CTD:84619
GeneTree:ENSGT00390000000732 HOGENOM:HOG000231955 InParanoid:Q17QX2
OMA:AWGTLEY OrthoDB:EOG4J6RR2 NextBio:20869657 ArrayExpress:Q17QX2
Uniprot:Q17QX2
Length = 513
Score = 149 (57.5 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSK 347
FA WE HTRGI S+++A MGY G GLG +G ++PV VLP +SLD E+ Q +
Sbjct: 308 FAGWEVHTRGIGSRLLAKMGYEFGKGLGRHAEGRVEPVHAVVLPRGKSLDQCAEILQKR 366
Score = 138 (53.6 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 119 WYDGRIIGLEETDSA----KVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSF 174
+++ I+G EE D +V +L PT +++ C FFL+ +CRF NCR SHG V +
Sbjct: 148 YHNAMIVGTEEADDGSPGVRVLYLYPTHKSLKPCSFFLEGKCRFQENCRFSHGQVVSVDE 207
Query: 175 LKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWD 212
L+ + GS A D G+W A + D
Sbjct: 208 LRPFQDPDLSSLQAGSACLAKRQD--GLWYPARITDVD 243
Score = 55 (24.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 95 EPEPLEDQRYS---VGSKCRFRYNDGRWYDGRIIGLE 128
E P +D S GS C + DG WY RI ++
Sbjct: 207 ELRPFQDPDLSSLQAGSACLAKRQDGLWYPARITDVD 243
>FB|FBgn0032169 [details] [associations]
symbol:CG4709 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00443
GO:GO:0005634 EMBL:AE014134 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 eggNOG:NOG241375
GeneTree:ENSGT00390000000732 OMA:AWGTLEY EMBL:AY058650
RefSeq:NP_609331.1 UniGene:Dm.4135 ProteinModelPortal:Q9VL59
MINT:MINT-322957 PaxDb:Q9VL59 PRIDE:Q9VL59
EnsemblMetazoa:FBtr0079884 GeneID:34324 KEGG:dme:Dmel_CG4709
UCSC:CG4709-RA FlyBase:FBgn0032169 InParanoid:Q9VL59
OrthoDB:EOG444J1N PhylomeDB:Q9VL59 ChiTaRS:CG4709 GenomeRNAi:34324
NextBio:787944 Bgee:Q9VL59 Uniprot:Q9VL59
Length = 513
Score = 165 (63.1 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 48/165 (29%), Positives = 72/165 (43%)
Query: 292 WENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSKEG-K 350
WE TRGI SK+M MGY G GLG+ G+GI+ PV+ ++LP +SLD +EL ++ G K
Sbjct: 308 WEEFTRGIGSKLMEKMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELREAANGDK 367
Query: 351 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVFSLINNQLRVHHETINGSSPKMQ 410
D DVF+ +N +++ G Q
Sbjct: 368 DYFSVERKLKRAQRRQRKADEKAYVRESQRV----DVFTFLN-------DSVLGPGESTQ 416
Query: 411 QHKGSVKEKKISRRDLVAYDDEIKDLRVRVVKLEEMVNRNKNEKA 455
Q G KK +L + K L V V++ + + R + + A
Sbjct: 417 Q--GEQVTKKAKTNELQQHST--KTLNVETVRIADEIRRKQRDMA 457
Score = 118 (46.6 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 134 KVSFLRPTSENMLMCKFFLQQRCRFG-TNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTI 192
+V F PT ML C ++L+ CRF CR SHG V S ++KY P + + +
Sbjct: 142 RVLFTNPTHREMLPCSYYLEGECRFDEAKCRFSHGALVTGSSIRKYNPPDFHKLSRSRPV 201
Query: 193 WALSDDKVGIWRKAEL 208
+AL D+ +W + +
Sbjct: 202 FALLPDR--LWHRGRV 215
>UNIPROTKB|C5IJB0 [details] [associations]
symbol:ZGPAT "Zinc finger CCCH-type with G patch
domain-containing protein" species:9940 "Ovis aries" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00356
SMART:SM00443 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0007175 CTD:84619 EMBL:FJ943995 RefSeq:NP_001155206.1
UniGene:Oar.9037 GeneID:100302028 Uniprot:C5IJB0
Length = 513
Score = 147 (56.8 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 29/59 (49%), Positives = 37/59 (62%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSK 347
FA WE HTRGI S+++A MGY G GLG G ++PV VLP +SLD E+ Q +
Sbjct: 308 FAGWEVHTRGIGSRLLAKMGYEFGKGLGRRADGRVEPVHAVVLPRGKSLDQCAEILQKR 366
Score = 136 (52.9 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 119 WYDGRIIGLEETDSA----KVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSF 174
+++ ++G EE D +V +L PT +++ C FFL+ +CRF NCR SHG V +
Sbjct: 148 YHNAMVVGTEEADDGSPGVRVLYLYPTHKSLKPCPFFLEGKCRFQENCRFSHGQVVSVDE 207
Query: 175 LKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWD 212
L+ + GS A D G+W A + D
Sbjct: 208 LRPFQDPDLSSLQAGSACLAKRQD--GLWYPARITDVD 243
Score = 55 (24.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 95 EPEPLEDQRYS---VGSKCRFRYNDGRWYDGRIIGLE 128
E P +D S GS C + DG WY RI ++
Sbjct: 207 ELRPFQDPDLSSLQAGSACLAKRQDGLWYPARITDVD 243
>ZFIN|ZDB-GENE-040426-1248 [details] [associations]
symbol:zgpat "zinc finger, CCCH-type with G patch
domain" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00443
ZFIN:ZDB-GENE-040426-1248 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG241375 HSSP:Q9UPT8 GO:GO:0007175 CTD:84619
GeneTree:ENSGT00390000000732 HOGENOM:HOG000231955 OMA:AWGTLEY
OrthoDB:EOG4J6RR2 EMBL:BC055224 IPI:IPI00501007 RefSeq:NP_956779.1
UniGene:Dr.8874 ProteinModelPortal:Q7SXW2 PRIDE:Q7SXW2
Ensembl:ENSDART00000037474 Ensembl:ENSDART00000129352 GeneID:393457
KEGG:dre:393457 InParanoid:Q7SXW2 NextBio:20814493 Bgee:Q7SXW2
Uniprot:Q7SXW2
Length = 504
Score = 147 (56.8 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 31/63 (49%), Positives = 37/63 (58%)
Query: 285 DTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELH 344
+T F WE HTRGI SK++ MGY G GLG + G ++PV VLP SLD EL
Sbjct: 297 NTAEFCGWEAHTRGIGSKLLMKMGYELGKGLGKTLSGRVEPVQAVVLPKGHSLDICAELT 356
Query: 345 QSK 347
Q K
Sbjct: 357 QRK 359
Score = 135 (52.6 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 81 TEDVQAEPLDPADVEPEPLEDQRYSVGSK-CR-FRYNDG--RWYDGRIIGLEETDS---- 132
+ED +P D + E E+++ G+K C +R + G +++ ++ EE +
Sbjct: 96 SEDSNEVKPNP-DTDEENEEEEQDISGTKVCAPYRTSWGTLEYHNAMVVCPEEPEGEEAR 154
Query: 133 AKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTI 192
+V ++ PT ++M C F+L+ +CRF NCR SHG V +S L+ ++ GS
Sbjct: 155 VRVFYIHPTHKSMKPCGFYLEGKCRFMDNCRYSHGEVVCVSELRDFLEADISNMESGSAC 214
Query: 193 WALSDDKVGIWRKAEL 208
A +D GIW A +
Sbjct: 215 LAKHED--GIWYPARI 228
Score = 56 (24.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 107 GSKCRFRYNDGRWYDGRIIGLE 128
GS C ++ DG WY RI +E
Sbjct: 211 GSACLAKHEDGIWYPARISEIE 232
>UNIPROTKB|Q5U4Z3 [details] [associations]
symbol:zgpat "Zinc finger CCCH-type with G patch
domain-containing protein" species:8355 "Xenopus laevis"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0007175 "negative regulation of epidermal growth
factor-activated receptor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000467 InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103
PROSITE:PS50174 SMART:SM00356 SMART:SM00443 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 GO:GO:0007175 CTD:84619 EMBL:BC084897
RefSeq:NP_001088537.1 UniGene:Xl.4404 ProteinModelPortal:Q5U4Z3
GeneID:495411 KEGG:xla:495411 Xenbase:XB-GENE-6253853
Uniprot:Q5U4Z3
Length = 524
Score = 156 (60.0 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 52/189 (27%), Positives = 79/189 (41%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSKE 348
F WE HTRGI SK++ MGY G GLG + +G ++P+ VLP +SLD +E+ Q K+
Sbjct: 319 FGGWEAHTRGIGSKLLVRMGYEFGKGLGRNAEGRVEPIQAVVLPKGKSLDQCMEIQQRKK 378
Query: 349 GKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDVFSLINNQLRVHHETI-NGSSP 407
D+F +N +L + +
Sbjct: 379 AGGKHKHKTSKRRPKASGQGGGAKAR-----------DIFDFLNEKLEGKFTSACTAETQ 427
Query: 408 KMQQHKGS--VKEKKISRRDL---VAYDDE-IKDLRVRVVKLEEMVNRNKNEKAVFEAAM 461
K + KG K S+R L VA E IK + + L+E + RN ++V +
Sbjct: 428 KTGEKKGKELYNASKDSKRALSVQVAITAEKIKQKQREICHLKESLARNAGRESVISNQL 487
Query: 462 R-KLNETRK 469
+L+ RK
Sbjct: 488 EVRLSGARK 496
Score = 123 (48.4 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 95 EPEPLEDQRYSVGSKCRFRYND--G--RWYDGRIIGLEETDSA----KVSFLRPTSENML 146
E E E++ + G K + Y G +++ ++G E+ + +V +L PT + M
Sbjct: 128 EEEEEEEEDNTSGMKVKAPYYSTWGTLEYHNAMVVGSEQMEDGEAGVRVLYLYPTHKAMK 187
Query: 147 MCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKA 206
C FFL +C F NCR SHG V ++ L+ + V S A +D GIW A
Sbjct: 188 PCPFFLDGKCLFNDNCRFSHGQVVSVTELQPFKEADLGSLAVDSPCLAQHND--GIWYPA 245
Query: 207 EL 208
+
Sbjct: 246 RI 247
Score = 61 (26.5 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 105 SVGSKCRFRYNDGRWYDGRIIGLE 128
+V S C ++NDG WY RI +E
Sbjct: 228 AVDSPCLAQHNDGIWYPARITDIE 251
>UNIPROTKB|I3LV51 [details] [associations]
symbol:ZGPAT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174
SMART:SM00356 SMART:SM00443 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0007175
GeneTree:ENSGT00390000000732 OMA:AWGTLEY Ensembl:ENSSSCT00000029862
Uniprot:I3LV51
Length = 488
Score = 152 (58.6 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSK 347
FA WE HTRGI SK++A MGY G GLG +G ++P+ VLP +SLD E+ Q +
Sbjct: 282 FAGWEVHTRGIGSKLLAKMGYELGKGLGRQAEGRVEPIHAVVLPRGKSLDQCAEILQKR 340
Score = 123 (48.4 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 82 EDVQAEPLDPADVEP-EPLEDQRYSVGSKCRFRYND--G--RWYDGRIIGLEET-DSA-- 133
++ +P +P + E E ED G K Y G +++ I+G E+ D A
Sbjct: 93 DEAGPDPSEPGEEEEGEDEEDAAELSGRKVNAPYYSPWGTLEYHNAMIVGTEQAEDGAPG 152
Query: 134 -KVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLK 176
+V +L PT +++ C FFL+ +CRF NCR SHG V + L+
Sbjct: 153 VRVLYLYPTHKSLKPCPFFLEGKCRFQENCRFSHGQVVSVDELR 196
Score = 43 (20.2 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 110 CRFRYNDGRWYDGRIIGLE 128
C + DG WY RI ++
Sbjct: 199 CLAKQQDGLWYPARITDVD 217
>UNIPROTKB|F1PAI4 [details] [associations]
symbol:ZGPAT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000467
InterPro:IPR000571 Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174
SMART:SM00356 SMART:SM00443 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00390000000732 OMA:AWGTLEY EMBL:AAEX03014164
Ensembl:ENSCAFT00000020709 Uniprot:F1PAI4
Length = 513
Score = 150 (57.9 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQ--S 346
FA WE HTRGI S+++A MGY G GLG +G ++P+ VLP +SLD E+ Q +
Sbjct: 310 FAGWEVHTRGIGSRLLAKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQCAEILQKRT 369
Query: 347 KEGK 350
K GK
Sbjct: 370 KGGK 373
Score = 122 (48.0 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 119 WYDGRIIGLEET--DSA--KVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSF 174
+++ I+G E SA +V +L PT +++ C FFL+ +CRF +CR SHG V +
Sbjct: 150 YHNAMIVGTEAARDGSAGVRVLYLYPTHKSLKPCPFFLEGKCRFQDSCRFSHGQVVSVDE 209
Query: 175 LKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDD 213
L+ + GS A D G+W A + D+
Sbjct: 210 LRPFQDPDLSSLQAGSACLAKQQD--GLWYPARITDVDN 246
Score = 56 (24.8 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 95 EPEPLEDQRYS---VGSKCRFRYNDGRWYDGRIIGLE 128
E P +D S GS C + DG WY RI ++
Sbjct: 209 ELRPFQDPDLSSLQAGSACLAKQQDGLWYPARITDVD 245
>WB|WBGene00016383 [details] [associations]
symbol:C33H5.17 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR000467 InterPro:IPR000571
Pfam:PF01585 PROSITE:PS50103 PROSITE:PS50174 SMART:SM00443
GO:GO:0008270 GO:GO:0003676 GO:GO:0019915 eggNOG:NOG241375
OMA:GYREGMG EMBL:FO080768 GeneTree:ENSGT00390000000732 PIR:T34154
RefSeq:NP_501296.1 ProteinModelPortal:Q18418 SMR:Q18418
PaxDb:Q18418 EnsemblMetazoa:C33H5.17.1 EnsemblMetazoa:C33H5.17.2
GeneID:177568 KEGG:cel:CELE_C33H5.17 UCSC:C33H5.17 CTD:177568
WormBase:C33H5.17 HOGENOM:HOG000020103 InParanoid:Q18418
NextBio:897404 Uniprot:Q18418
Length = 432
Score = 135 (52.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 48/189 (25%), Positives = 86/189 (45%)
Query: 40 LQEVLKELVQAI--KDAEEGLFHLKRARL-LREADLVLHGCSSRTE-DVQAEPLDPADVE 95
L++ +K + + I + EE ++ ++ L E ++ +T+ + +D D +
Sbjct: 7 LKDQIKRIDEMIVQETNEETRVEYEQTKMDLEELVSLMEEDEEKTQKSPDDDEIDEQDED 66
Query: 96 PEPLEDQRYS--VGSKCRFRYNDGR---WYDGRIIGLEETDSAKVSFLRPTSENMLMCKF 150
++D +GS+C Y+ R + I+ +E + +V F PT M C
Sbjct: 67 SAEIDDTSTDSLLGSRCMVPYDSDRSLSLHTAIIMEIESSKRVRVLFSHPTCSAMKPCTH 126
Query: 151 FLQQRCRFGTNCRLSHGIDVPLSFLKKY-VPT-SW--EQSLVGSTIWALSDDKVGIWRKA 206
FL C+F NCR SHG V L ++ Y VP S+ E+ LV + +SD IW
Sbjct: 127 FLSSSCKFNENCRFSHGYSVELERIQDYQVPDYSFIVEEGLV--LVKGMSD----IWELG 180
Query: 207 ELGSWDDEH 215
+ + D ++
Sbjct: 181 RISAIDTQN 189
Score = 97 (39.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 36/169 (21%), Positives = 62/169 (36%)
Query: 298 GIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAVELHQSKEGKDXXXXXX 357
G+ K+M MGY+ G GLG GI+ + ++ SLD + + ++ D
Sbjct: 250 GVGMKLMMKMGYKVGEGLGKRSDGIVHAIQARICKKNASLDEVMT--RKRKFIDRKEVQK 307
Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXPDVFSLINNQLRVHHETINGSSPKMQQHKGSVK 417
D+F+ IN +L +E K Q
Sbjct: 308 NKNIKKLKTTDESEM-------------DIFAFINRKLEKKNERTFADVRKETQEMAGYS 354
Query: 418 EKKISRRDLVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNE 466
K + ++L + E+K L+ + KL+ + RN+ +K L E
Sbjct: 355 SKTLGAKNL-DLELELKQLKEKQNKLKSGIQRNRGDKNTVSKMSESLRE 402
Score = 85 (35.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 291 KWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVKVLPPKQSLDHAV 341
KW G+ K+M MGY+ G GLG GI+ + ++ SLD +
Sbjct: 245 KWNGG--GVGMKLMMKMGYKVGEGLGKRSDGIVHAIQARICKKNASLDEVM 293
>UNIPROTKB|E1C285 [details] [associations]
symbol:ZGPAT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007175
"negative regulation of epidermal growth factor-activated receptor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000571 PROSITE:PS50103
GO:GO:0005634 GO:GO:0045892 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0007175 GeneTree:ENSGT00390000000732
EMBL:AADN02019154 IPI:IPI00598738 Ensembl:ENSGALT00000009828
OMA:WHSARIT Uniprot:E1C285
Length = 350
Score = 137 (53.3 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 41/131 (31%), Positives = 62/131 (47%)
Query: 86 AEPLDPADVEPEPLEDQRYSVGSKCRFRYNDGRWYDGRIIGLE--ETDSA--KVSFLRPT 141
+E + +D E E E V + + +++ I+G E E SA +V +L PT
Sbjct: 120 SEEEEESDREEEEEELSGMKVKAPYYSSWGTLEYHNAMIVGTEYLEDGSAGVRVLYLYPT 179
Query: 142 SENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVG 201
+++ C FFL +CRF NCR SHG V + L+ + + VGS A D G
Sbjct: 180 HKSLKPCPFFLDDKCRFKENCRFSHGQVVSVEELQPFQEPNLSTLEVGSACLAKHSD--G 237
Query: 202 IWRKAELGSWD 212
IW A++ D
Sbjct: 238 IWYAAKITDID 248
Score = 85 (35.0 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMG 314
F WE HTRGI SK++ MGY G G
Sbjct: 318 FGGWEAHTRGIGSKLLVQMGYEFGKG 343
>UNIPROTKB|Q0IIX9 [details] [associations]
symbol:tfip11 "Tuftelin-interacting protein 11"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ342032
EMBL:BC121497 RefSeq:NP_001090845.1 UniGene:Str.52797 STRING:Q0IIX9
GeneID:100038256 KEGG:xtr:100038256 Xenbase:XB-GENE-984521
Uniprot:Q0IIX9
Length = 825
Score = 128 (50.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 281 GVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVK 329
G++++T F WE HT+GI K++ MGY +G GLG + QGI+ P+ K
Sbjct: 131 GIKSNTD-FGSWERHTKGIGQKLLQKMGYVQGRGLGKNAQGIIAPIEAK 178
>ZFIN|ZDB-GENE-040718-479 [details] [associations]
symbol:tfip11 "tuftelin interacting protein 11"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 ZFIN:ZDB-GENE-040718-479 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 EMBL:BC075755 EMBL:BC096995
IPI:IPI00513582 RefSeq:NP_001002721.1 UniGene:Dr.7492 STRING:Q6DI35
GeneID:436994 KEGG:dre:436994 InParanoid:Q6DI35 NextBio:20831412
ArrayExpress:Q6DI35 Uniprot:Q6DI35
Length = 832
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G+R + WE HTRGI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGSFKTSQRFAGGIRTGQDL-GNWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPIEA 180
Query: 329 KV 330
K+
Sbjct: 181 KL 182
>UNIPROTKB|Q66J74 [details] [associations]
symbol:tfip11 "Tuftelin-interacting protein 11"
species:8355 "Xenopus laevis" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 KO:K13103
CTD:24144 HOVERGEN:HBG055868 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ342033 EMBL:BC081033
RefSeq:NP_001087642.1 UniGene:Xl.4331 GeneID:447466 KEGG:xla:447466
Xenbase:XB-GENE-984527 Uniprot:Q66J74
Length = 824
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 281 GVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVK 329
G++++T F WE HT+GI K++ MGY G GLG + QGI+ P+ K
Sbjct: 131 GIKSNTD-FGSWERHTKGIGQKLLQKMGYMPGRGLGKNAQGIIAPIEAK 178
>UNIPROTKB|F1RG71 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0071013 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706
GeneTree:ENSGT00390000012739 OMA:SMSHLYG EMBL:CT841533
Ensembl:ENSSSCT00000010917 Uniprot:F1RG71
Length = 835
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|Q06AK6 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9823 "Sus scrofa" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031214
"biomineral tissue development" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681
GO:GO:0031214 KO:K13103 eggNOG:NOG312699 HOGENOM:HOG000230470
HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:DQ923315
RefSeq:NP_001070682.1 UniGene:Ssc.23477 STRING:Q06AK6 PRIDE:Q06AK6
GeneID:768099 KEGG:ssc:768099 CTD:663492 Uniprot:Q06AK6
Length = 836
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|Q29RR5 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9913 "Bos taurus" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031214
"biomineral tissue development" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0005681
GO:GO:0031214 KO:K13103 EMBL:DQ342029 EMBL:BC114058 IPI:IPI00824913
RefSeq:NP_001039495.2 UniGene:Bt.56280 STRING:Q29RR5 PRIDE:Q29RR5
GeneID:509349 KEGG:bta:509349 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InParanoid:Q29RR5
OrthoDB:EOG4BRWK2 NextBio:20868933 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 Uniprot:Q29RR5
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|A1XD97 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9615 "Canis lupus familiaris" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031214 "biomineral tissue development" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739 OMA:SMSHLYG
EMBL:DQ342030 RefSeq:NP_001073577.1 UniGene:Cfa.45002 STRING:A1XD97
Ensembl:ENSCAFT00000018663 Ensembl:ENSCAFT00000044117
Ensembl:ENSCAFT00000045711 GeneID:477530 KEGG:cfa:477530
InParanoid:A1XD97 NextBio:20852993 Uniprot:A1XD97
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|Q9UBB9 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031214 "biomineral tissue development"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0006396 "RNA processing"
evidence=IC] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842
PROSITE:PS50174 SMART:SM00443 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 EMBL:CH471095 GO:GO:0016607 GO:GO:0005578
GO:GO:0031214 GO:GO:0000398 GO:GO:0071013 EMBL:Z99714 EMBL:Z95115
KO:K13103 CTD:24144 eggNOG:NOG312699 HOGENOM:HOG000230470
HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 OMA:SMSHLYG
EMBL:AF070662 EMBL:AL080147 EMBL:AL050258 EMBL:BT007274
EMBL:CT841511 EMBL:BC011599 IPI:IPI00015924 IPI:IPI00220893
PIR:T12531 RefSeq:NP_001008697.1 RefSeq:NP_036275.1
UniGene:Hs.20225 ProteinModelPortal:Q9UBB9 IntAct:Q9UBB9
STRING:Q9UBB9 PhosphoSite:Q9UBB9 DMDM:22096235 PaxDb:Q9UBB9
PeptideAtlas:Q9UBB9 PRIDE:Q9UBB9 DNASU:24144
Ensembl:ENST00000405938 Ensembl:ENST00000407148
Ensembl:ENST00000407431 Ensembl:ENST00000407690 GeneID:24144
KEGG:hsa:24144 UCSC:uc003acq.2 UCSC:uc003acr.2
GeneCards:GC22M026887 HGNC:HGNC:17165 HPA:HPA027085 MIM:612747
neXtProt:NX_Q9UBB9 PharmGKB:PA38441 InParanoid:Q9UBB9
PhylomeDB:Q9UBB9 ChiTaRS:TFIP11 GenomeRNAi:24144 NextBio:46829
ArrayExpress:Q9UBB9 Bgee:Q9UBB9 CleanEx:HS_TFIP11
Genevestigator:Q9UBB9 GermOnline:ENSG00000100109 Uniprot:Q9UBB9
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|A1XD93 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9598 "Pan troglodytes" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739 OMA:SMSHLYG
EMBL:DQ342026 RefSeq:NP_001073621.1 UniGene:Ptr.6572 STRING:A1XD93
PRIDE:A1XD93 Ensembl:ENSPTRT00000026524 GeneID:458725
KEGG:ptr:458725 InParanoid:A1XD93 NextBio:20839105 Uniprot:A1XD93
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|A1XD94 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9544 "Macaca mulatta" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 CTD:24144 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 OMA:SMSHLYG EMBL:DQ342027 RefSeq:NP_001073589.1
UniGene:Mmu.14330 STRING:A1XD94 Ensembl:ENSMMUT00000032991
GeneID:712691 KEGG:mcc:712691 NextBio:19980789 Uniprot:A1XD94
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|A1XD95 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9541 "Macaca fascicularis" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 HOVERGEN:HBG055868
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 EMBL:DQ342028 EMBL:AB168161 Uniprot:A1XD95
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|A4UMC5 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9986 "Oryctolagus cuniculus" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 eggNOG:NOG312699
HOGENOM:HOG000230470 HOVERGEN:HBG055868 OrthoDB:EOG4BRWK2
InterPro:IPR024933 InterPro:IPR022159 Pfam:PF12457
PIRSF:PIRSF017706 CTD:663492 EMBL:EF443269 RefSeq:NP_001093435.1
UniGene:Ocu.7148 STRING:A4UMC5 GeneID:100101578 Uniprot:A4UMC5
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>UNIPROTKB|Q5R5K8 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9601 "Pongo abelii" [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0005737
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144
HOGENOM:HOG000230470 HOVERGEN:HBG055868 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706 EMBL:CR860850
RefSeq:NP_001126744.1 UniGene:Pab.18632 GeneID:100173746
KEGG:pon:100173746 InParanoid:Q5R5K8 Uniprot:Q5R5K8
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>RGD|1311449 [details] [associations]
symbol:Tfip11 "tuftelin interacting protein 11" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA;ISO] [GO:0031214 "biomineral tissue
development" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] InterPro:IPR000467
InterPro:IPR022783 Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174
SMART:SM00443 RGD:1311449 GO:GO:0005737 GO:GO:0006355 GO:GO:0008380
GO:GO:0003677 GO:GO:0016607 GO:GO:0005578 GO:GO:0006397
GO:GO:0005681 GO:GO:0031214 GO:GO:0071013 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:DQ342031 EMBL:BC085809 IPI:IPI00190035
RefSeq:NP_001008292.1 UniGene:Rn.161710 STRING:Q5U2Y6
PhosphoSite:Q5U2Y6 PRIDE:Q5U2Y6 Ensembl:ENSRNOT00000000828
GeneID:288718 KEGG:rno:288718 InParanoid:Q5U2Y6 NextBio:628609
Genevestigator:Q5U2Y6 Uniprot:Q5U2Y6
Length = 837
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 122 GGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 181
Query: 329 K 329
K
Sbjct: 182 K 182
>MGI|MGI:1930075 [details] [associations]
symbol:Tfip11 "tuftelin interacting protein 11"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005622 "intracellular"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
"cell differentiation" evidence=NAS] [GO:0030198 "extracellular
matrix organization" evidence=NAS] [GO:0031214 "biomineral tissue
development" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
MGI:MGI:1930075 GO:GO:0005737 GO:GO:0030154 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0005578
GO:GO:0006397 GO:GO:0030198 GO:GO:0005681 GO:GO:0031214
GO:GO:0071013 KO:K13103 UniGene:Mm.172947 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:AF290474 EMBL:BC017682 IPI:IPI00112101
RefSeq:NP_061253.2 ProteinModelPortal:Q9ERA6 STRING:Q9ERA6
PhosphoSite:Q9ERA6 PaxDb:Q9ERA6 PRIDE:Q9ERA6
Ensembl:ENSMUST00000031288 GeneID:54723 KEGG:mmu:54723
InParanoid:Q9ERA6 NextBio:311578 Bgee:Q9ERA6 CleanEx:MM_TFIP11
Genevestigator:Q9ERA6 GermOnline:ENSMUSG00000029345 Uniprot:Q9ERA6
Length = 838
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 269 GVGFDESNNLKRGVRNDTVVFAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAV 328
G F S G + F WE HT+GI K++ MGY G GLG + QGI++P+
Sbjct: 123 GGNFKPSQKGFSGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEA 182
Query: 329 K 329
K
Sbjct: 183 K 183
>UNIPROTKB|Q5ZII9 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR000467 InterPro:IPR022783 Pfam:PF01585
Pfam:PF07842 PROSITE:PS50174 SMART:SM00443 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0005578
GO:GO:0006397 GO:GO:0005681 GO:GO:0071013 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:AJ720795 IPI:IPI00588712 RefSeq:NP_001025836.1
UniGene:Gga.22499 ProteinModelPortal:Q5ZII9 STRING:Q5ZII9
Ensembl:ENSGALT00000009022 GeneID:416909 KEGG:gga:416909
InParanoid:Q5ZII9 NextBio:20820302 Uniprot:Q5ZII9
Length = 827
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVK 329
F WE HT+GI K++ MGY G GLG + QGI++P+ K
Sbjct: 138 FGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAK 178
>UNIPROTKB|A4UMC6 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:13616 "Monodelphis domestica" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0005737 GO:GO:0006355 GO:GO:0008380 GO:GO:0003677
GO:GO:0006397 GO:GO:0005681 GO:GO:0031214 KO:K13103 CTD:24144
eggNOG:NOG312699 HOGENOM:HOG000230470 HOVERGEN:HBG055868
OrthoDB:EOG4BRWK2 InterPro:IPR024933 InterPro:IPR022159
Pfam:PF12457 PIRSF:PIRSF017706 GeneTree:ENSGT00390000012739
OMA:SMSHLYG EMBL:EF443270 RefSeq:NP_001091078.1 UniGene:Mdm.4707
Ensembl:ENSMODT00000013666 GeneID:100010097 KEGG:mdo:100010097
Uniprot:A4UMC6
Length = 834
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVK 329
F WE HT+GI K++ MGY G GLG + QGI++P+ K
Sbjct: 141 FGSWERHTKGIGQKLLQKMGYVPGKGLGKNAQGIINPIEAK 181
>UNIPROTKB|F1MR60 [details] [associations]
symbol:TFIP11 "Tuftelin-interacting protein 11"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000467 InterPro:IPR022783
Pfam:PF01585 Pfam:PF07842 PROSITE:PS50174 SMART:SM00443
GO:GO:0006355 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0005578 GO:GO:0006397 GO:GO:0071013 KO:K13103
RefSeq:NP_001039495.2 UniGene:Bt.56280 GeneID:509349
KEGG:bta:509349 CTD:24144 NextBio:20868933 InterPro:IPR024933
InterPro:IPR022159 Pfam:PF12457 PIRSF:PIRSF017706
GeneTree:ENSGT00390000012739 OMA:SMSHLYG EMBL:DAAA02045526
EMBL:DAAA02045527 IPI:IPI01017463 Ensembl:ENSBTAT00000016296
Ensembl:ENSBTAT00000052574 Uniprot:F1MR60
Length = 837
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 289 FAKWENHTRGIASKMMANMGYREGMGLGASGQGILDPVAVK 329
F WE HT+GI K++ MGY G GLG + QGI++P+ K
Sbjct: 142 FGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAK 182
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 497 406 0.00078 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 616 (65 KB)
Total size of DFA: 268 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.64u 0.10s 33.74t Elapsed: 00:00:01
Total cpu time: 33.65u 0.10s 33.75t Elapsed: 00:00:01
Start: Tue May 21 04:45:01 2013 End: Tue May 21 04:45:02 2013