Query 010937
Match_columns 497
No_of_seqs 294 out of 993
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 17:24:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010937.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010937hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a4f_A SurviVal of motor neuro 98.9 2.2E-09 7.5E-14 84.6 6.1 55 101-179 6-62 (64)
2 1mhn_A SurviVal motor neuron p 98.9 2.5E-09 8.4E-14 82.9 5.5 54 102-179 2-57 (59)
3 1g5v_A SurviVal motor neuron p 98.8 5.4E-09 1.9E-13 87.5 5.6 55 101-179 8-64 (88)
4 2equ_A PHD finger protein 20-l 98.8 7.1E-09 2.4E-13 84.1 6.0 39 101-139 7-45 (74)
5 3s6w_A Tudor domain-containing 98.8 5.6E-09 1.9E-13 79.3 5.0 51 103-177 1-53 (54)
6 3p8d_A Medulloblastoma antigen 98.7 1.2E-08 4.2E-13 81.1 5.5 39 102-140 5-43 (67)
7 3qii_A PHD finger protein 20; 98.7 1.2E-08 4.2E-13 84.4 5.2 40 101-140 19-58 (85)
8 1mhn_A SurviVal motor neuron p 98.7 3E-08 1E-12 76.7 6.6 53 185-238 3-55 (59)
9 4a4f_A SurviVal of motor neuro 98.7 3.4E-08 1.2E-12 77.8 6.8 54 184-238 7-60 (64)
10 1g5v_A SurviVal motor neuron p 98.7 3.2E-08 1.1E-12 82.8 7.0 54 184-238 9-62 (88)
11 3pnw_C Tudor domain-containing 98.6 3.1E-08 1.1E-12 80.9 5.3 57 101-181 15-73 (77)
12 3s6w_A Tudor domain-containing 98.6 6E-08 2E-12 73.6 6.2 52 186-238 2-53 (54)
13 2d9t_A Tudor domain-containing 98.5 9.9E-08 3.4E-12 78.0 5.8 56 101-180 7-64 (78)
14 2ldm_A Uncharacterized protein 97.9 1.4E-08 4.9E-13 83.6 0.0 38 102-139 5-42 (81)
15 3pnw_C Tudor domain-containing 98.5 2.2E-07 7.4E-12 75.9 6.5 53 185-238 17-69 (77)
16 2d9t_A Tudor domain-containing 98.4 3.9E-07 1.3E-11 74.4 6.9 53 185-238 9-61 (78)
17 2equ_A PHD finger protein 20-l 98.3 6E-07 2E-11 72.8 6.1 50 185-238 9-58 (74)
18 3fdr_A Tudor and KH domain-con 98.2 1.5E-06 5.1E-11 72.9 6.0 60 102-186 26-86 (94)
19 2ldm_A Uncharacterized protein 97.4 3.5E-07 1.2E-11 75.3 0.0 51 184-238 5-55 (81)
20 1ssf_A Transformation related 98.1 5.4E-06 1.8E-10 75.3 7.3 103 103-241 8-115 (156)
21 2diq_A Tudor and KH domain-con 97.9 8.1E-06 2.8E-10 70.3 4.0 39 102-140 31-70 (110)
22 3qii_A PHD finger protein 20; 97.9 2.1E-05 7.3E-10 65.1 6.2 51 184-238 20-70 (85)
23 2eqj_A Metal-response element- 97.9 2.4E-05 8.1E-10 61.7 6.1 39 101-139 11-50 (66)
24 3p8d_A Medulloblastoma antigen 97.8 2.5E-05 8.6E-10 62.0 6.1 50 185-238 6-55 (67)
25 3fdr_A Tudor and KH domain-con 97.8 4.4E-05 1.5E-09 63.8 7.0 51 185-237 27-77 (94)
26 2g3r_A Tumor suppressor P53-bi 97.8 0.00013 4.5E-09 63.8 9.9 103 104-240 5-110 (123)
27 2qqr_A JMJC domain-containing 97.8 7.5E-05 2.6E-09 65.5 8.4 107 103-237 5-111 (118)
28 2xdp_A Lysine-specific demethy 97.7 3.4E-05 1.2E-09 68.2 5.8 108 102-237 5-112 (123)
29 2l8d_A Lamin-B receptor; DNA b 97.7 5.7E-05 2E-09 59.1 5.6 40 101-140 7-48 (66)
30 2diq_A Tudor and KH domain-con 97.6 6.9E-05 2.4E-09 64.4 6.1 51 185-237 32-82 (110)
31 2dig_A Lamin-B receptor; tudor 97.6 9.6E-05 3.3E-09 58.0 5.3 39 101-139 10-50 (68)
32 3h8z_A FragIle X mental retard 97.5 0.0008 2.7E-08 59.9 11.3 108 104-238 2-116 (128)
33 4hcz_A PHD finger protein 1; p 97.5 0.00014 4.8E-09 55.7 5.4 37 103-139 3-40 (58)
34 3dlm_A Histone-lysine N-methyl 97.4 0.00055 1.9E-08 65.5 9.4 97 102-225 7-111 (213)
35 4b9x_A TDRD1, tudor domain-con 97.4 0.00039 1.3E-08 66.9 8.4 51 185-237 65-115 (226)
36 3ntk_A Maternal protein tudor; 97.4 0.00015 5.1E-09 66.9 5.2 38 103-140 47-85 (169)
37 2eqk_A Tudor domain-containing 97.3 0.00018 6.2E-09 59.5 4.3 55 101-179 19-74 (85)
38 4b9w_A TDRD1, tudor domain-con 97.3 0.00033 1.1E-08 66.2 6.7 60 103-187 65-125 (201)
39 2wac_A CG7008-PA; unknown func 97.3 0.00023 7.8E-09 67.2 5.4 58 103-186 51-109 (218)
40 2hqx_A P100 CO-activator tudor 97.3 0.00024 8.1E-09 68.9 5.5 38 102-139 64-101 (246)
41 4b9w_A TDRD1, tudor domain-con 97.3 0.00045 1.5E-08 65.2 7.1 51 185-237 65-115 (201)
42 3ask_A E3 ubiquitin-protein li 97.2 0.00086 2.9E-08 65.0 8.1 88 104-214 3-108 (226)
43 4b9x_A TDRD1, tudor domain-con 97.0 0.00062 2.1E-08 65.5 5.6 38 103-140 65-103 (226)
44 2rhk_C Cleavage and polyadenyl 97.0 0.0002 6.7E-09 57.5 1.7 26 144-169 15-40 (72)
45 2m0o_A PHD finger protein 1; t 97.0 0.0014 4.7E-08 52.9 6.5 39 101-139 24-63 (79)
46 2l8d_A Lamin-B receptor; DNA b 97.0 0.0016 5.5E-08 50.9 6.3 52 185-238 9-60 (66)
47 2e5q_A PHD finger protein 19; 97.0 0.001 3.5E-08 51.5 5.1 39 101-139 5-44 (63)
48 2lcd_A AT-rich interactive dom 96.0 0.00012 4.2E-09 63.3 0.0 90 102-226 5-94 (118)
49 3ntk_A Maternal protein tudor; 96.9 0.0012 4E-08 60.8 6.2 46 184-231 46-91 (169)
50 2e5p_A Protein PHF1, PHD finge 96.9 0.0015 5E-08 51.4 5.6 38 102-139 8-46 (68)
51 2dig_A Lamin-B receptor; tudor 96.9 0.0017 5.9E-08 50.9 5.9 51 185-237 12-62 (68)
52 2d9n_A Cleavage and polyadenyl 96.9 0.00044 1.5E-08 56.0 2.6 27 144-170 9-35 (77)
53 2eqj_A Metal-response element- 96.8 0.0019 6.6E-08 50.8 5.8 46 184-231 12-57 (66)
54 3db3_A E3 ubiquitin-protein li 96.8 0.0049 1.7E-07 56.4 9.0 101 101-213 8-124 (161)
55 2wac_A CG7008-PA; unknown func 96.8 0.002 6.8E-08 60.7 6.7 50 185-237 51-100 (218)
56 2cqe_A KIAA1064 protein; CCCH 96.8 0.00046 1.6E-08 58.6 2.0 25 143-167 11-35 (98)
57 2eqk_A Tudor domain-containing 96.7 0.0028 9.7E-08 52.4 6.3 56 181-238 17-72 (85)
58 2hqx_A P100 CO-activator tudor 96.7 0.0024 8.1E-08 61.8 6.7 50 185-237 65-114 (246)
59 3bdl_A Staphylococcal nuclease 96.6 0.0015 5.3E-08 70.9 5.5 60 102-186 410-469 (570)
60 1m9o_A Tristetraproline; Cys3H 96.5 0.00075 2.6E-08 54.0 1.8 26 144-169 11-37 (77)
61 2xk0_A Polycomb protein PCL; t 96.5 0.006 2E-07 48.3 6.8 38 101-139 13-50 (69)
62 2cqe_A KIAA1064 protein; CCCH 96.5 0.00076 2.6E-08 57.2 1.6 24 145-168 36-60 (98)
63 2d9m_A Zinc finger CCCH-type d 96.3 0.0017 5.7E-08 51.8 2.2 29 146-178 21-49 (69)
64 4hcz_A PHD finger protein 1; p 96.3 0.0098 3.4E-07 45.6 6.3 42 185-228 3-44 (58)
65 2e5p_A Protein PHF1, PHD finge 96.0 0.011 3.9E-07 46.4 5.9 48 185-234 9-56 (68)
66 2e5q_A PHD finger protein 19; 95.9 0.015 5E-07 45.1 5.9 47 184-232 6-52 (63)
67 3d2q_A Muscleblind-like protei 95.9 0.0028 9.6E-08 50.3 1.8 26 145-170 6-32 (70)
68 3bdl_A Staphylococcal nuclease 95.8 0.01 3.5E-07 64.5 6.7 50 185-237 411-460 (570)
69 2d9n_A Cleavage and polyadenyl 95.5 0.0054 1.8E-07 49.5 2.1 24 145-169 38-62 (77)
70 2rpp_A Muscleblind-like protei 95.5 0.0048 1.6E-07 51.5 1.8 33 137-169 9-42 (89)
71 1m9o_A Tristetraproline; Cys3H 95.5 0.0028 9.6E-08 50.6 0.4 25 145-169 50-75 (77)
72 2rhk_C Cleavage and polyadenyl 95.4 0.0057 1.9E-07 48.9 2.1 24 144-168 43-67 (72)
73 3d2q_A Muscleblind-like protei 95.4 0.0056 1.9E-07 48.6 1.9 28 141-169 38-65 (70)
74 2e5s_A Otthump00000018578; ZF- 95.4 0.0055 1.9E-07 52.0 1.9 28 141-169 52-79 (98)
75 3dlm_A Histone-lysine N-methyl 95.3 0.17 5.7E-06 48.4 11.9 118 101-229 66-197 (213)
76 2e5s_A Otthump00000018578; ZF- 95.2 0.0042 1.4E-07 52.7 0.6 28 144-171 19-47 (98)
77 2m0o_A PHD finger protein 1; t 95.1 0.023 7.8E-07 45.8 4.4 42 184-227 25-66 (79)
78 3d2n_A Muscleblind-like protei 94.8 0.0095 3.3E-07 49.0 1.7 25 145-169 9-34 (83)
79 2biv_A SCML2 protein, sex COMB 94.7 0.24 8.3E-06 48.3 11.8 123 101-226 60-210 (243)
80 2qqr_A JMJC domain-containing 94.4 0.055 1.9E-06 47.4 5.7 46 184-232 4-49 (118)
81 3sd4_A PHD finger protein 20; 94.2 0.11 3.9E-06 40.8 6.6 40 101-140 10-50 (69)
82 2lcc_A AT-rich interactive dom 94.1 0.072 2.5E-06 43.1 5.3 61 102-181 4-67 (76)
83 3d2n_A Muscleblind-like protei 93.8 0.02 7E-07 47.0 1.7 25 144-169 42-66 (83)
84 2f5k_A MORF-related gene 15 is 93.8 0.083 2.8E-06 45.1 5.4 61 101-181 20-80 (102)
85 3mea_A SAGA-associated factor 93.4 0.55 1.9E-05 43.9 10.8 108 101-225 42-156 (180)
86 2ro0_A Histone acetyltransfera 93.3 0.15 5.1E-06 42.7 6.1 39 101-140 21-59 (92)
87 2eko_A Histone acetyltransfera 93.3 0.079 2.7E-06 44.0 4.3 40 101-140 7-50 (87)
88 2r58_A Polycomb protein SCM; M 93.2 0.65 2.2E-05 45.9 11.5 123 101-226 32-182 (265)
89 2xk0_A Polycomb protein PCL; t 92.9 0.19 6.4E-06 39.8 5.7 41 184-228 14-54 (69)
90 3mp6_A MBP, SGF29, maltose-bin 92.8 0.62 2.1E-05 49.3 11.7 106 101-226 385-496 (522)
91 1wgs_A MYST histone acetyltran 92.6 0.25 8.5E-06 44.0 6.9 40 101-140 10-51 (133)
92 2rnz_A Histone acetyltransfera 92.6 0.25 8.6E-06 41.5 6.5 39 101-140 23-61 (94)
93 2g3r_A Tumor suppressor P53-bi 92.6 0.16 5.4E-06 44.5 5.4 49 186-236 5-53 (123)
94 2rpp_A Muscleblind-like protei 92.3 0.049 1.7E-06 45.4 1.9 25 144-169 50-74 (89)
95 2xdp_A Lysine-specific demethy 92.0 0.076 2.6E-06 46.8 2.8 45 184-231 5-49 (123)
96 1oz2_A Lethal(3)malignant brai 91.6 1.6 5.4E-05 44.4 12.4 120 101-226 146-291 (331)
97 3u9g_A Zinc finger CCCH-type a 90.0 0.096 3.3E-06 50.6 1.5 26 142-168 172-197 (229)
98 2eqm_A PHD finger protein 20-l 90.0 0.71 2.4E-05 38.2 6.6 41 101-141 17-58 (88)
99 2lcc_A AT-rich interactive dom 88.9 0.36 1.2E-05 38.9 3.9 57 182-238 2-63 (76)
100 1ssf_A Transformation related 88.8 0.49 1.7E-05 43.0 5.2 44 185-231 8-51 (156)
101 1wgs_A MYST histone acetyltran 88.5 0.48 1.6E-05 42.1 4.9 52 185-238 12-69 (133)
102 2eqm_A PHD finger protein 20-l 88.2 1.8 6.3E-05 35.7 7.9 45 182-228 16-60 (88)
103 3oa6_A MALE-specific lethal 3 87.5 0.97 3.3E-05 39.0 5.9 61 101-180 17-86 (110)
104 2ro0_A Histone acetyltransfera 87.3 1.4 4.9E-05 36.7 6.8 52 184-238 22-77 (92)
105 2lrq_A Protein MRG15, NUA4 com 87.0 0.12 4.1E-06 42.6 0.0 62 101-182 10-71 (85)
106 3m9q_A Protein MALE-specific l 87.0 1.2 4E-05 37.9 6.2 61 101-180 17-86 (101)
107 3sd4_A PHD finger protein 20; 86.7 1.7 5.9E-05 33.9 6.6 42 183-226 10-51 (69)
108 3mea_A SAGA-associated factor 85.9 1.5 5E-05 41.0 6.8 40 101-140 114-156 (180)
109 2bud_A Males-absent on the fir 85.4 1.4 4.9E-05 36.8 5.7 57 104-179 15-74 (92)
110 2eko_A Histone acetyltransfera 85.4 0.95 3.3E-05 37.4 4.6 56 184-239 8-69 (87)
111 3u1l_A PRE-mRNA-splicing facto 83.9 0.28 9.6E-06 47.7 0.9 24 147-170 72-95 (240)
112 2f5k_A MORF-related gene 15 is 83.7 1.7 5.9E-05 36.9 5.6 42 184-228 21-64 (102)
113 3u9g_A Zinc finger CCCH-type a 83.6 0.32 1.1E-05 46.9 1.2 24 144-167 88-115 (229)
114 3h8z_A FragIle X mental retard 83.0 1.9 6.3E-05 38.2 5.7 57 101-180 58-119 (128)
115 3m9p_A MALE-specific lethal 3 82.5 1.6 5.3E-05 37.7 4.9 62 101-181 17-87 (110)
116 3pmi_A PWWP domain-containing 82.0 1.8 6.3E-05 38.1 5.2 66 102-186 3-69 (134)
117 2fc6_A Nuclear, target of EGR1 81.4 0.47 1.6E-05 35.2 1.1 29 144-172 19-48 (50)
118 3mp6_A MBP, SGF29, maltose-bin 79.5 2.5 8.7E-05 44.5 6.4 39 101-139 455-494 (522)
119 3ut1_A Lethal(3)malignant brai 79.1 10 0.00034 38.4 10.4 120 101-226 141-286 (324)
120 2rnz_A Histone acetyltransfera 77.9 3.5 0.00012 34.6 5.4 52 184-238 24-79 (94)
121 3f70_A Lethal(3)malignant brai 76.5 14 0.00047 39.1 10.9 118 104-225 259-404 (456)
122 3m9p_A MALE-specific lethal 3 72.6 4.3 0.00015 35.0 4.8 41 185-227 19-70 (110)
123 1oz2_A Lethal(3)malignant brai 72.3 39 0.0013 34.1 12.7 122 101-226 39-187 (331)
124 3m9q_A Protein MALE-specific l 71.6 6.6 0.00023 33.3 5.6 59 173-237 11-82 (101)
125 3feo_A MBT domain-containing p 71.4 27 0.00092 36.7 11.6 119 102-225 253-400 (437)
126 2lw1_A ABC transporter ATP-bin 70.9 18 0.00061 29.4 8.1 54 424-477 22-78 (89)
127 2bud_A Males-absent on the fir 70.3 9.2 0.00031 31.9 6.1 39 188-228 17-60 (92)
128 3ut1_A Lethal(3)malignant brai 68.7 11 0.00038 38.0 7.7 122 101-225 34-181 (324)
129 2k3y_A Chromatin modification- 67.4 5 0.00017 35.8 4.2 29 101-130 7-35 (136)
130 2ckk_A KIN17; beta barrel, rib 66.9 18 0.00061 31.6 7.7 100 104-236 15-123 (127)
131 3h6z_A Polycomb protein SFMBT; 63.7 40 0.0014 35.5 11.0 122 101-226 265-415 (447)
132 1wjq_A KIAA1798 protein; MBT d 60.0 16 0.00054 31.2 5.8 41 101-142 11-53 (107)
133 3db3_A E3 ubiquitin-protein li 57.5 15 0.0005 33.6 5.4 36 102-137 91-132 (161)
134 3ask_A E3 ubiquitin-protein li 56.4 13 0.00044 35.8 5.2 38 102-139 74-117 (226)
135 3u1c_A Tropomyosin alpha-1 cha 55.2 57 0.0019 27.2 8.4 59 426-487 39-97 (101)
136 2daq_A WHSC1L1 protein, isofor 54.8 17 0.00058 30.5 5.2 28 101-128 6-33 (110)
137 1wjq_A KIAA1798 protein; MBT d 53.9 27 0.00091 29.8 6.2 47 178-226 6-52 (107)
138 2lrq_A Protein MRG15, NUA4 com 57.5 3 0.0001 34.2 0.0 42 184-228 11-54 (85)
139 2k3y_A Chromatin modification- 48.0 12 0.00041 33.3 3.2 26 185-213 9-34 (136)
140 1i84_S Smooth muscle myosin he 47.3 23 0.00079 41.5 6.4 49 186-238 28-76 (1184)
141 3hnw_A Uncharacterized protein 47.0 60 0.0021 28.7 7.7 62 426-490 70-131 (138)
142 3u59_A Tropomyosin beta chain; 46.5 93 0.0032 25.7 8.4 58 426-486 39-96 (101)
143 1x79_B RAB GTPase binding effe 46.5 1.2E+02 0.0039 26.1 9.0 65 426-490 15-80 (112)
144 1kk8_A Myosin heavy chain, str 46.4 25 0.00086 39.9 6.3 49 186-238 28-76 (837)
145 1khc_A DNA cytosine-5 methyltr 46.1 37 0.0013 30.3 6.2 52 184-237 10-67 (147)
146 4fu6_A PC4 and SFRS1-interacti 45.6 36 0.0012 30.2 6.1 58 178-237 15-77 (153)
147 3f70_A Lethal(3)malignant brai 45.0 52 0.0018 34.7 8.1 121 102-225 152-297 (456)
148 3v33_A Ribonuclease ZC3H12A; r 44.7 4.6 0.00016 38.9 0.0 26 144-171 191-216 (223)
149 3hd7_B Syntaxin-1A; membrane p 44.3 69 0.0024 26.9 7.4 69 426-494 16-88 (109)
150 3sja_C Golgi to ER traffic pro 43.7 1.1E+02 0.0038 23.8 7.7 51 430-480 5-57 (65)
151 1ri0_A Hepatoma-derived growth 43.5 37 0.0013 28.7 5.5 52 184-237 18-74 (110)
152 4db1_A Myosin-7; S1DC, cardiac 43.4 32 0.0011 38.8 6.5 47 187-238 32-78 (783)
153 3e9g_A Chromatin modification- 42.5 30 0.001 30.5 4.8 28 102-130 6-33 (130)
154 4anj_A Unconventional myosin-V 41.8 30 0.001 40.4 6.1 48 187-238 2-50 (1052)
155 4g2k_A General control protein 40.8 90 0.0031 27.2 7.4 56 428-483 18-74 (125)
156 4b6m_A Tubulin-specific chaper 40.4 15 0.00052 30.0 2.5 76 102-183 4-84 (84)
157 1khc_A DNA cytosine-5 methyltr 39.0 46 0.0016 29.6 5.7 29 101-129 9-37 (147)
158 3sjb_C Golgi to ER traffic pro 38.8 1.7E+02 0.0058 24.3 8.7 60 428-487 20-81 (93)
159 2lcd_A AT-rich interactive dom 44.0 6.8 0.00023 33.9 0.0 47 182-232 3-49 (118)
160 3qby_A Hepatoma-derived growth 37.6 57 0.002 26.7 5.7 52 184-237 4-60 (94)
161 2fhd_A RAD9 homolog, DNA repai 37.2 33 0.0011 30.9 4.4 33 108-140 10-49 (153)
162 1ri0_A Hepatoma-derived growth 37.1 30 0.001 29.2 4.0 37 101-138 17-60 (110)
163 2ycu_A Non muscle myosin 2C, a 37.1 37 0.0013 39.3 5.9 48 187-238 6-53 (995)
164 2gfu_A DNA mismatch repair pro 36.6 47 0.0016 28.9 5.3 55 181-237 18-82 (134)
165 3i00_A HIP-I, huntingtin-inter 36.3 1.1E+02 0.0037 26.4 7.4 45 431-475 15-60 (120)
166 3llr_A DNA (cytosine-5)-methyl 35.8 39 0.0013 30.5 4.7 57 101-181 14-77 (154)
167 2no2_A HIP-I, huntingtin-inter 35.1 1.2E+02 0.004 25.6 7.3 58 426-483 24-82 (107)
168 2kr7_A FKBP-type peptidyl-prol 34.6 55 0.0019 28.9 5.5 39 102-141 92-130 (151)
169 1uwv_A 23S rRNA (uracil-5-)-me 34.4 34 0.0012 35.2 4.7 51 103-167 43-95 (433)
170 2lf0_A Uncharacterized protein 33.7 1.4E+02 0.0047 25.9 7.4 51 429-479 8-60 (123)
171 4gkw_A Spindle assembly abnorm 33.1 1.5E+02 0.0052 26.2 7.7 31 457-487 48-78 (167)
172 2w6b_A RHO guanine nucleotide 32.8 74 0.0025 23.9 4.9 45 420-464 6-50 (56)
173 1w9i_A Myosin II heavy chain; 31.9 58 0.002 36.7 6.2 46 188-238 31-79 (770)
174 2e6z_A Transcription elongatio 30.3 58 0.002 24.4 4.1 37 101-140 5-43 (59)
175 2dfs_A Myosin-5A; myosin-V, in 30.2 1.3E+02 0.0045 35.0 9.0 63 428-490 981-1051(1080)
176 1gk4_A Vimentin; intermediate 29.1 1.9E+02 0.0067 23.0 7.4 25 457-481 28-52 (84)
177 3cgm_A SLYD, peptidyl-prolyl C 29.1 64 0.0022 28.9 5.0 39 102-141 83-121 (158)
178 3tnu_B Keratin, type II cytosk 28.9 2.4E+02 0.0083 24.0 8.6 58 427-484 46-104 (129)
179 3o48_A Mitochondria fission 1 28.9 59 0.002 28.7 4.6 38 15-52 89-126 (134)
180 3mq9_A Bone marrow stromal ant 28.6 1.2E+02 0.0042 31.0 7.7 51 430-480 372-422 (471)
181 4fu6_A PC4 and SFRS1-interacti 28.3 40 0.0014 29.9 3.5 27 101-128 20-47 (153)
182 4dnd_A Syntaxin-10, SYN10; str 28.3 1.3E+02 0.0044 26.2 6.7 32 33-64 58-89 (130)
183 3feo_A MBT domain-containing p 28.3 2.4E+02 0.0083 29.4 9.9 120 102-224 154-292 (437)
184 2jjq_A Uncharacterized RNA met 28.2 40 0.0014 34.9 3.9 51 103-167 43-95 (425)
185 1wjr_A KIAA1617 protein; MBT d 26.9 58 0.002 28.4 4.1 41 101-142 9-51 (127)
186 1y8m_A FIS1; mitochondria, unk 26.9 51 0.0018 29.5 3.8 36 16-51 89-124 (144)
187 3pie_A 5'->3' exoribonuclease 26.7 69 0.0024 37.7 5.8 73 100-183 1062-1140(1155)
188 3llr_A DNA (cytosine-5)-methyl 26.5 1E+02 0.0035 27.7 5.8 52 184-237 15-72 (154)
189 3tnu_A Keratin, type I cytoske 26.4 2.7E+02 0.0093 23.8 8.4 59 426-484 47-106 (131)
190 2pms_C Pneumococcal surface pr 26.3 1.6E+02 0.0055 25.7 6.7 58 426-483 63-124 (125)
191 1qp2_A Protein (PSAE protein); 26.3 44 0.0015 26.4 2.8 34 186-223 2-41 (70)
192 4b6x_A AVRRPS4, avirulence pro 26.0 2.6E+02 0.009 22.6 8.6 56 429-484 27-84 (90)
193 3oa6_A MALE-specific lethal 3 25.7 72 0.0025 27.3 4.3 42 185-228 19-71 (110)
194 2gd5_A Charged multivesicular 25.7 2.6E+02 0.009 25.1 8.6 68 420-487 17-89 (179)
195 1t3j_A Mitofusin 1; coiled coi 25.7 1E+02 0.0034 25.8 5.1 43 426-468 49-91 (96)
196 1nzn_A CGI-135 protein, fissio 25.3 53 0.0018 28.6 3.6 37 15-51 85-121 (126)
197 2jz2_A SSL0352 protein; SH3-li 25.3 1.1E+02 0.0038 23.7 4.9 35 186-224 2-38 (66)
198 2ca5_A MXIH; transport protein 25.1 63 0.0022 26.4 3.7 39 11-49 17-56 (85)
199 3tnu_B Keratin, type II cytosk 24.9 2.9E+02 0.01 23.5 8.3 66 426-491 31-104 (129)
200 2lw1_A ABC transporter ATP-bin 24.7 2.7E+02 0.0091 22.2 7.6 49 6-56 21-74 (89)
201 2jz2_A SSL0352 protein; SH3-li 24.2 93 0.0032 24.1 4.2 35 104-139 2-38 (66)
202 1whm_A Cylindromatosis tumor s 24.1 67 0.0023 26.6 3.7 68 102-175 8-82 (92)
203 2daq_A WHSC1L1 protein, isofor 24.0 1.3E+02 0.0045 24.9 5.7 51 185-237 8-68 (110)
204 2v71_A Nuclear distribution pr 23.6 2.5E+02 0.0084 26.1 7.9 56 426-481 58-114 (189)
205 3efg_A Protein SLYX homolog; x 23.6 2.2E+02 0.0076 22.6 6.7 26 426-451 16-41 (78)
206 3oja_B Anopheles plasmodium-re 23.5 1.9E+02 0.0066 30.3 8.3 26 462-487 544-569 (597)
207 2l5g_B Putative uncharacterize 23.4 1E+02 0.0034 22.0 3.9 30 418-448 11-40 (42)
208 1jth_B Syntaxin 1A; coiled-coi 23.1 2.5E+02 0.0086 21.7 6.9 60 429-488 8-71 (77)
209 3l42_A Peregrin; transcription 22.8 94 0.0032 27.3 4.6 25 184-210 4-28 (130)
210 1w7j_A Myosin VA; motor protei 22.7 1E+02 0.0034 34.8 6.1 46 185-233 6-52 (795)
211 3pfs_A Bromodomain and PHD fin 22.5 1.3E+02 0.0043 27.4 5.6 26 183-210 34-59 (158)
212 4dt4_A FKBP-type 16 kDa peptid 22.5 1E+02 0.0034 28.0 5.0 39 102-141 111-149 (169)
213 2yrv_A AT-rich interactive dom 22.4 75 0.0026 27.5 3.8 31 103-133 10-42 (117)
214 3q0x_A Centriole protein; cent 22.4 2.2E+02 0.0076 27.2 7.6 54 426-489 173-226 (228)
215 2lw9_A Unconventionnal myosin- 21.7 64 0.0022 23.7 2.7 18 430-447 5-22 (51)
216 3qby_A Hepatoma-derived growth 21.7 90 0.0031 25.5 4.1 37 102-138 4-46 (94)
217 1at0_A 17-hedgehog; developmen 21.6 3.2E+02 0.011 23.6 8.1 31 182-213 88-118 (145)
218 2v71_A Nuclear distribution pr 21.2 4.1E+02 0.014 24.7 8.9 60 427-486 52-112 (189)
219 1ses_A Seryl-tRNA synthetase; 21.1 2.6E+02 0.0089 28.8 8.5 59 427-487 38-96 (421)
220 2dq0_A Seryl-tRNA synthetase; 20.8 1.8E+02 0.006 30.5 7.1 61 427-487 41-101 (455)
221 3frt_A Charged multivesicular 20.8 3E+02 0.01 26.0 8.2 68 419-486 16-88 (218)
222 4dac_A Computationally designe 20.6 74 0.0025 20.2 2.5 23 427-449 4-26 (28)
No 1
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=98.88 E-value=2.2e-09 Score=84.59 Aligned_cols=55 Identities=29% Similarity=0.558 Sum_probs=46.9
Q ss_pred ccCCCCCCeeEEEeC-CCceeeeEEEeecc-CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccccccc
Q 010937 101 DQRYSVGSKCRFRYN-DGRWYDGRIIGLEE-TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKY 178 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~-~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~ 178 (497)
...|.+|+.|+|+|+ ||.||+|+|.++.+ ++.+.|+|+. ||+. ..|+++.||+.
T Consensus 6 ~~~~~vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd------------------YGn~------e~V~~~~Lrpl 61 (64)
T 4a4f_A 6 THSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG------------------YGNA------EVTPLLNLKPV 61 (64)
T ss_dssp SSCCCTTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT------------------TTEE------EEEEGGGEECC
T ss_pred CCCCCCCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe------------------cCCE------EEEeHHHcEeC
Confidence 467999999999997 99999999999987 4689999988 5643 67888888875
Q ss_pred C
Q 010937 179 V 179 (497)
Q Consensus 179 ~ 179 (497)
.
T Consensus 62 ~ 62 (64)
T 4a4f_A 62 E 62 (64)
T ss_dssp S
T ss_pred C
Confidence 4
No 2
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=98.86 E-value=2.5e-09 Score=82.89 Aligned_cols=54 Identities=26% Similarity=0.458 Sum_probs=46.4
Q ss_pred cCCCCCCeeEEEeC-CCceeeeEEEeecc-CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccC
Q 010937 102 QRYSVGSKCRFRYN-DGRWYDGRIIGLEE-TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYV 179 (497)
Q Consensus 102 ~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~-~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~ 179 (497)
..|.+|+.|+|+|+ ||.||.|+|+++.+ ...+.|+|+. ||+ -..|+++.|++..
T Consensus 2 ~~~~~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~D------------------YGn------~e~v~~~~Lr~~~ 57 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTG------------------YGN------REEQNLSDLLSPI 57 (59)
T ss_dssp CCCCTTCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETT------------------TTE------EEEEEGGGCBCTT
T ss_pred CcCCcCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEc------------------CCC------EEEEcHHHeeCCC
Confidence 36999999999998 99999999999986 5789999987 563 3778999999864
No 3
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=98.78 E-value=5.4e-09 Score=87.54 Aligned_cols=55 Identities=25% Similarity=0.430 Sum_probs=47.0
Q ss_pred ccCCCCCCeeEEEeC-CCceeeeEEEeecc-CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccccccc
Q 010937 101 DQRYSVGSKCRFRYN-DGRWYDGRIIGLEE-TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKY 178 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~-~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~ 178 (497)
...|.+|+.|+|+|+ ||.||.|+|.+|.+ ...|.|+|+. || +-..|+++.|++.
T Consensus 8 ~~~~kvGd~C~A~ys~Dg~wYrA~I~~i~~~~~~~~V~fiD------------------YG------N~E~V~~~~Lrp~ 63 (88)
T 1g5v_A 8 LQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTG------------------YG------NREEQNLSDLLSP 63 (88)
T ss_dssp -CCCCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEEETT------------------TC------CEEEEEGGGCBCC
T ss_pred cCCCCCCCEEEEEECCCCCEEEEEEEEecCCCCEEEEEEec------------------CC------CEEEEcHHHcccC
Confidence 347999999999998 99999999999987 4789999987 56 3478999999986
Q ss_pred C
Q 010937 179 V 179 (497)
Q Consensus 179 ~ 179 (497)
.
T Consensus 64 ~ 64 (88)
T 1g5v_A 64 I 64 (88)
T ss_dssp C
T ss_pred C
Confidence 4
No 4
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=7.1e-09 Score=84.14 Aligned_cols=39 Identities=21% Similarity=0.457 Sum_probs=36.1
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEec
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLR 139 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~ 139 (497)
...|.+|+.|+|+|+||.||+|+|++|.+++.+.|.|..
T Consensus 7 ~~~~kvGd~clA~wsDg~~Y~A~I~~v~~~~~~~V~f~D 45 (74)
T 2equ_A 7 GFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQFYD 45 (74)
T ss_dssp CCCCCTTCEEEEECSSSSEEEEEEEEESTTSSEEEEETT
T ss_pred CCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEEec
Confidence 457999999999999999999999999987889999987
No 5
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=98.78 E-value=5.6e-09 Score=79.35 Aligned_cols=51 Identities=27% Similarity=0.500 Sum_probs=41.5
Q ss_pred CCCCCCeeEEEeC-CCceeeeEEEeeccC-CceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccc
Q 010937 103 RYSVGSKCRFRYN-DGRWYDGRIIGLEET-DSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKK 177 (497)
Q Consensus 103 ~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~-~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~ 177 (497)
.|.+|+.|+|+|+ ||.||.|+|+++.++ ..+.|+|+. ||+. ..|+++.|||
T Consensus 1 ~wk~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~fvD------------------YGn~------e~v~~~~lrp 53 (54)
T 3s6w_A 1 MWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFID------------------YGNY------EEVLLSNIKP 53 (54)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEC--CCSEEEEEETT------------------TCCE------EEEEGGGEEC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEc------------------cCCe------EEEeHHHEEE
Confidence 3899999999997 999999999999764 579999987 5643 6788888876
No 6
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=98.72 E-value=1.2e-08 Score=81.09 Aligned_cols=39 Identities=13% Similarity=0.392 Sum_probs=36.1
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
..|.+|++|+|+|.||.||+|+|++|.+++.+.|.|...
T Consensus 5 ~~~~vGd~vmArW~D~~yYpA~I~si~~~~~Y~V~F~dG 43 (67)
T 3p8d_A 5 SEFQINEQVLACWSDCRFYPAKVTAVNKDGTYTVKFYDG 43 (67)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEEEECTTSEEEEEETTS
T ss_pred cccccCCEEEEEcCCCCEeeEEEEEECCCCeEEEEEeCC
Confidence 469999999999999999999999999998999999763
No 7
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=98.70 E-value=1.2e-08 Score=84.43 Aligned_cols=40 Identities=13% Similarity=0.386 Sum_probs=35.9
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
...|.+|++|+|+|.||.||+|+|++|.+++.+.|.|...
T Consensus 19 ~~~f~vGd~VlArW~D~~yYPAkI~sV~~~~~YtV~F~DG 58 (85)
T 3qii_A 19 SSEFQINEQVLACWSDCRFYPAKVTAVNKDGTYTVKFYDG 58 (85)
T ss_dssp --CCCTTCEEEEECTTSCEEEEEEEEECTTSEEEEEETTS
T ss_pred CcccccCCEEEEEeCCCCEeeEEEEEECCCCeEEEEEeCC
Confidence 5689999999999999999999999999999999999763
No 8
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=98.68 E-value=3e-08 Score=76.74 Aligned_cols=53 Identities=21% Similarity=0.177 Sum_probs=46.3
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
..++|..|+|++ ..||.||+|+|.+++...+.|.|.|.++|+...|+...|.+
T Consensus 3 ~~~~G~~c~A~~-s~Dg~wYrA~I~~i~~~~~~~~V~f~DYGn~e~v~~~~Lr~ 55 (59)
T 1mhn_A 3 QWKVGDKCSAIW-SEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLS 55 (59)
T ss_dssp CCCTTCEEEEEC-TTTSCEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGGCBC
T ss_pred cCCcCCEEEEEE-CCCCCEEEEEEEEEcCCCCEEEEEEEcCCCEEEEcHHHeeC
Confidence 467999999996 35999999999999876688999999999999998777664
No 9
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=98.67 E-value=3.4e-08 Score=77.76 Aligned_cols=54 Identities=19% Similarity=0.218 Sum_probs=47.3
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
...++|..|+|++ ..||.||+|+|++++.+.+.|.|.|.++|+...|+...|.+
T Consensus 7 ~~~~vGd~c~A~~-s~Dg~wYrA~I~~v~~~~~~~~V~fvdYGn~e~V~~~~Lrp 60 (64)
T 4a4f_A 7 HSWKVGDKCMAVW-SEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKP 60 (64)
T ss_dssp SCCCTTCEEEEEC-TTTSSEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGGEEC
T ss_pred CCCCCCCEEEEEE-CCCCCEEEEEEEEEcCCCCEEEEEEEecCCEEEEeHHHcEe
Confidence 4678999999996 36999999999999986678999999999999998777664
No 10
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=98.67 E-value=3.2e-08 Score=82.84 Aligned_cols=54 Identities=20% Similarity=0.184 Sum_probs=47.6
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
...++|..|+|++ ..||.||+|+|.+++...+.|.|+|.+||+...|+...|.|
T Consensus 9 ~~~kvGd~C~A~y-s~Dg~wYrA~I~~i~~~~~~~~V~fiDYGN~E~V~~~~Lrp 62 (88)
T 1g5v_A 9 QQWKVGDKCSAIW-SEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLS 62 (88)
T ss_dssp CCCCSSCEEEEEC-TTTCCEEEEEEEEEETTTTEEEEEETTTCCEEEEEGGGCBC
T ss_pred CCCCCCCEEEEEE-CCCCCEEEEEEEEecCCCCEEEEEEecCCCEEEEcHHHccc
Confidence 3568999999996 36999999999999976678999999999999999887775
No 11
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=98.62 E-value=3.1e-08 Score=80.90 Aligned_cols=57 Identities=25% Similarity=0.442 Sum_probs=46.4
Q ss_pred ccCCCCCCeeEEEeC-CCceeeeEEEeeccC-CceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccccccc
Q 010937 101 DQRYSVGSKCRFRYN-DGRWYDGRIIGLEET-DSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKY 178 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~-~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~ 178 (497)
...|.+|+.|+|+|+ ||.||.|+|+++.++ ..+.|+|+- ||+. ..|+++.||++
T Consensus 15 ~~~~kvGd~C~A~ys~Dg~wYRA~I~~i~~~~~~~~V~fvD------------------YGN~------e~V~~~~Lr~l 70 (77)
T 3pnw_C 15 AKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFID------------------YGNY------EEVLLSNIKPI 70 (77)
T ss_dssp HTTCCTTCEEEEEETTTTEEEEEEEEEECTTSSEEEEEETT------------------TCCE------EEEEGGGEECC
T ss_pred cCCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEc------------------CCCe------EEEeHHHeEEC
Confidence 457999999999997 999999999999864 579999987 6643 67899999987
Q ss_pred CCC
Q 010937 179 VPT 181 (497)
Q Consensus 179 ~~p 181 (497)
.+-
T Consensus 71 ~~~ 73 (77)
T 3pnw_C 71 QTE 73 (77)
T ss_dssp ---
T ss_pred Chh
Confidence 643
No 12
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=98.61 E-value=6e-08 Score=73.63 Aligned_cols=52 Identities=17% Similarity=0.140 Sum_probs=43.4
Q ss_pred ccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 186 SLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 186 l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
.++|..|+|++ ..||.||+|+|.+++...+.+.|.|-++|+...|+...|.|
T Consensus 2 wk~G~~c~A~~-s~Dg~wYrA~I~~i~~~~~~~~V~fvDYGn~e~v~~~~lrp 53 (54)
T 3s6w_A 2 WKPGDECFALY-WEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKP 53 (54)
T ss_dssp CCTTCEEEEEE-TTTTEEEEEEEEEC--CCSEEEEEETTTCCEEEEEGGGEEC
T ss_pred CCCCCEEEEEE-CCCCCEEEEEEEEEeCCCCEEEEEEEccCCeEEEeHHHEEE
Confidence 46899999997 36999999999999876678999999999999998776653
No 13
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=98.53 E-value=9.9e-08 Score=78.00 Aligned_cols=56 Identities=25% Similarity=0.409 Sum_probs=48.0
Q ss_pred ccCCCCCCeeEEEeC-CCceeeeEEEeecc-CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccccccc
Q 010937 101 DQRYSVGSKCRFRYN-DGRWYDGRIIGLEE-TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKY 178 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~-~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~ 178 (497)
...|.+|+.|+|+|+ ||.||.|+|+.+.+ ...+.|+|+- ||+. ..|+++.||++
T Consensus 7 ~~~~~~G~~c~A~~s~Dg~wYRA~I~~i~~~~~~~~V~fiD------------------YGN~------e~V~~~~Lr~l 62 (78)
T 2d9t_A 7 GKVWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTD------------------YGNY------EEVLLSNIKPV 62 (78)
T ss_dssp CCCCCTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETT------------------TTEE------EEEEGGGEEEC
T ss_pred ccCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEc------------------CCCe------EEEcHHHeEeC
Confidence 456899999999998 99999999999986 4679999987 6643 77999999998
Q ss_pred CC
Q 010937 179 VP 180 (497)
Q Consensus 179 ~~ 180 (497)
.+
T Consensus 63 ~~ 64 (78)
T 2d9t_A 63 QT 64 (78)
T ss_dssp CC
T ss_pred CH
Confidence 64
No 14
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=97.89 E-value=1.4e-08 Score=83.58 Aligned_cols=38 Identities=13% Similarity=0.454 Sum_probs=34.9
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEec
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLR 139 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~ 139 (497)
..|.+|++|+|+|+||.||+|+|+++.+++.|.|.|..
T Consensus 5 ~~~kvGd~clAkwsDg~wY~A~I~~v~~~~~y~V~F~D 42 (81)
T 2ldm_A 5 SEFQINEQVLASWSDSRFYPAKVTAVNKDGTYTVKFYD 42 (81)
Confidence 46999999999999999999999999877789999975
No 15
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=98.47 E-value=2.2e-07 Score=75.87 Aligned_cols=53 Identities=17% Similarity=0.131 Sum_probs=46.4
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
..++|..|+|++ ..||.||+|+|++++...+.|.|.|-++|+...|+...|.+
T Consensus 17 ~~kvGd~C~A~y-s~Dg~wYRA~I~~i~~~~~~~~V~fvDYGN~e~V~~~~Lr~ 69 (77)
T 3pnw_C 17 MWKPGDECFALY-WEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKP 69 (77)
T ss_dssp TCCTTCEEEEEE-TTTTEEEEEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEC
T ss_pred CCCcCCEEEEEE-CCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEeHHHeEE
Confidence 468999999997 36999999999999876678999999999999998777663
No 16
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=98.42 E-value=3.9e-07 Score=74.43 Aligned_cols=53 Identities=17% Similarity=0.142 Sum_probs=46.3
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
..++|..|+|++ ..||.||+|+|++++...+.|.|.|-++|+...|+...|.+
T Consensus 9 ~~~~G~~c~A~~-s~Dg~wYRA~I~~i~~~~~~~~V~fiDYGN~e~V~~~~Lr~ 61 (78)
T 2d9t_A 9 VWKPGDECFALY-WEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLSNIKP 61 (78)
T ss_dssp CCCTTCEEEEEC-TTTCCEEEEEEEEECSSSSEEEEEETTTTEEEEEEGGGEEE
T ss_pred CCCcCCEEEEEE-CCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEcHHHeEe
Confidence 467999999996 35999999999999876678999999999999998777664
No 17
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.35 E-value=6e-07 Score=72.82 Aligned_cols=50 Identities=16% Similarity=0.040 Sum_probs=42.9
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
..++|..|+|+. .||.||+|+|++|+.+ +.|.|+|.++ +...|+...|.+
T Consensus 9 ~~kvGd~clA~w--sDg~~Y~A~I~~v~~~-~~~~V~f~Dy-n~e~v~~~~lrp 58 (74)
T 2equ_A 9 DFKAGEEVLARW--TDCRYYPAKIEAINKE-GTFTVQFYDG-VIRCLKRMHIKA 58 (74)
T ss_dssp CCCTTCEEEEEC--SSSSEEEEEEEEESTT-SSEEEEETTS-CEEEECGGGEEC
T ss_pred CCCCCCEEEEEC--CCCCEEEEEEEEECCC-CEEEEEEecC-CeEEecHHHCee
Confidence 567999999995 4999999999999875 6799999999 888888666653
No 18
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=98.22 E-value=1.5e-06 Score=72.85 Aligned_cols=60 Identities=27% Similarity=0.486 Sum_probs=49.7
Q ss_pred cCCCCCCeeEEEeC-CCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCC
Q 010937 102 QRYSVGSKCRFRYN-DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVP 180 (497)
Q Consensus 102 ~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~ 180 (497)
..+.+|+.|.|+|+ ||.||.|+|+++.+++.+.|+|+- ||.. ..|+++.|++..
T Consensus 26 ~~~~~G~~c~a~~~~d~~wyRA~I~~~~~~~~~~V~fvD------------------yGn~------e~v~~~~lr~l~- 80 (94)
T 3fdr_A 26 LTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVD------------------FGDN------GDCPLKDLRALR- 80 (94)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECTTSCEEEEETT------------------TCCE------EEECGGGCEECC-
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEc------------------CCCe------EEEEHHHhhhcC-
Confidence 46899999999996 999999999999877789999987 5643 678889998865
Q ss_pred CCcccc
Q 010937 181 TSWEQS 186 (497)
Q Consensus 181 pd~~~l 186 (497)
++|..|
T Consensus 81 ~~f~~l 86 (94)
T 3fdr_A 81 SDFLSL 86 (94)
T ss_dssp GGGGCS
T ss_pred HHHhcC
Confidence 566555
No 19
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=97.40 E-value=3.5e-07 Score=75.29 Aligned_cols=51 Identities=12% Similarity=0.075 Sum_probs=43.8
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
..+++|..|+|+. .||.||+|+|++++.+ +.|.|+|.+ |+...|+.+.|.|
T Consensus 5 ~~~kvGd~clAkw--sDg~wY~A~I~~v~~~-~~y~V~F~D-Gn~E~V~~s~LrP 55 (81)
T 2ldm_A 5 SEFQINEQVLASW--SDSRFYPAKVTAVNKD-GTYTVKFYD-GVVQTVKHIHVKA 55 (81)
Confidence 4578999999995 4999999999999864 579999999 9999998777764
No 20
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=98.09 E-value=5.4e-06 Score=75.30 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=75.1
Q ss_pred CCCCCCeeEEEeCC-CceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCcccc--CCCcccCcccccccC
Q 010937 103 RYSVGSKCRFRYND-GRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRL--SHGIDVPLSFLKKYV 179 (497)
Q Consensus 103 ~~~vG~kC~A~~~d-G~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~--sHg~~v~~~~L~~~~ 179 (497)
...+|.+|+|+|+| +-||+++|..+.+.+.+.|.|.- |..|.. .|..+
T Consensus 8 ~~~iG~rVfArWsd~~yyYpG~V~~~~~~~~Y~V~FdD-------------------G~~k~v~~~divv---------- 58 (156)
T 1ssf_A 8 NSFVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDD-------------------GYECDVLGKDILL---------- 58 (156)
T ss_dssp CCSTTCEEEECSSCSSEEEEEEEEECCTTTEEEEECTT-------------------SCEEEEETTTEEE----------
T ss_pred cchhccEEEEEcCCCCcccccEEEEeccCCEEEEEEcC-------------------CCeeEeeccceEE----------
Confidence 45899999999995 45779999999888899999976 444443 33221
Q ss_pred CCCcccccCCCeEEEeecCCCCceEeeEEeeee--CCCceEEEEEeCCCCceeecccccccccc
Q 010937 180 PTSWEQSLVGSTIWALSDDKVGIWRKAELGSWD--DEHRMGEVVFRDDGSSAKLGIEAMTLSEY 241 (497)
Q Consensus 180 ~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d--~~~~~~~V~f~~~g~~~~~~~d~~~~~e~ 241 (497)
...|.+|..|+|. ..+..|..|+|.... .+...|.|.+ .|....++.-.|.|++-
T Consensus 59 ---~~~LP~~~~V~A~--~~ddy~s~giI~~h~~~~~e~~Y~Ve~--~G~t~~~~~~dI~LS~e 115 (156)
T 1ssf_A 59 ---CDPIPLDTEVTAL--SEDEYFSAGVVKGHRKESGELYYSIEK--EGQRKWYKRMAVILSLE 115 (156)
T ss_dssp ---ECCSCSSEEEEES--SCTTTCEEEEEEEEEEETTEEEEEEEE--TTEEEEECGGGEEEEHH
T ss_pred ---EeccCCCcEEEEc--cCCccccccEEEeecCCCCcEEEEEEe--CCcEEEEEeeeEEECHH
Confidence 1245567899998 458999999998443 3347899998 56677777777777543
No 21
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.87 E-value=8.1e-06 Score=70.30 Aligned_cols=39 Identities=23% Similarity=0.458 Sum_probs=34.8
Q ss_pred cCCCCCCeeEEEeC-CCceeeeEEEeeccCCceEEEEecC
Q 010937 102 QRYSVGSKCRFRYN-DGRWYDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 102 ~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
..+.+|+.|.|+|+ ||.||.|+|+++.++..+.|+|+-.
T Consensus 31 ~~~~~G~~c~a~~~~d~~wyRA~V~~~~~~~~~~V~fvDy 70 (110)
T 2diq_A 31 LTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDF 70 (110)
T ss_dssp CCCCTTCEEEECCTTTCSCEEEEECCCCSSSCEEEEETTT
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEeC
Confidence 35789999999997 8999999999998777899999883
No 22
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=97.86 E-value=2.1e-05 Score=65.07 Aligned_cols=51 Identities=12% Similarity=0.063 Sum_probs=42.7
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
....+|..|||+. .|+.||+|+|++|+.+ +.|+|+|.+ |....|....|-+
T Consensus 20 ~~f~vGd~VlArW--~D~~yYPAkI~sV~~~-~~YtV~F~D-G~~etvk~~~IKp 70 (85)
T 3qii_A 20 SEFQINEQVLACW--SDCRFYPAKVTAVNKD-GTYTVKFYD-GVVQTVKHIHVKA 70 (85)
T ss_dssp -CCCTTCEEEEEC--TTSCEEEEEEEEECTT-SEEEEEETT-SCEEEEEGGGEEE
T ss_pred cccccCCEEEEEe--CCCCEeeEEEEEECCC-CeEEEEEeC-CCeEEecHHHccc
Confidence 3557999999996 6999999999999976 689999998 8888887666553
No 23
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=97.86 E-value=2.4e-05 Score=61.65 Aligned_cols=39 Identities=23% Similarity=0.396 Sum_probs=34.5
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeecc-CCceEEEEec
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEE-TDSAKVSFLR 139 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~-~~~vrV~Fl~ 139 (497)
...|.+|+-|+|+|+||.||+|+|+.|.. .++|.|.|--
T Consensus 11 ~~~f~vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D 50 (66)
T 2eqj_A 11 ACKFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFED 50 (66)
T ss_dssp CCCSCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETT
T ss_pred cccccCCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEcc
Confidence 45799999999999999999999999987 4788888843
No 24
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=97.85 E-value=2.5e-05 Score=62.05 Aligned_cols=50 Identities=12% Similarity=0.063 Sum_probs=42.6
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
...+|..|+|+. .|+.||+|+|++|+.+ +.|+|+|.+ |....|....|-+
T Consensus 6 ~~~vGd~vmArW--~D~~yYpA~I~si~~~-~~Y~V~F~d-G~~etvk~~~ikp 55 (67)
T 3p8d_A 6 EFQINEQVLACW--SDCRFYPAKVTAVNKD-GTYTVKFYD-GVVQTVKHIHVKA 55 (67)
T ss_dssp CCCTTCEEEEEC--TTSCEEEEEEEEECTT-SEEEEEETT-SCEEEEEGGGEEE
T ss_pred ccccCCEEEEEc--CCCCEeeEEEEEECCC-CeEEEEEeC-CceEEEeHHHccc
Confidence 456899999995 6999999999999976 679999999 8888887666654
No 25
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=97.78 E-value=4.4e-05 Score=63.82 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=44.3
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
.+.+|..|+|++ ..||.||||+|.++.. .+.+.|.|-++|+...|+...|.
T Consensus 27 ~~~~G~~c~a~~-~~d~~wyRA~I~~~~~-~~~~~V~fvDyGn~e~v~~~~lr 77 (94)
T 3fdr_A 27 TVHVGDIVAAPL-PTNGSWYRARVLGTLE-NGNLDLYFVDFGDNGDCPLKDLR 77 (94)
T ss_dssp CCCTTCEEEEEE-TTTTEEEEEEEEEECT-TSCEEEEETTTCCEEEECGGGCE
T ss_pred CCCCCCEEEEEE-CCCCeEEEEEEEEECC-CCeEEEEEEcCCCeEEEEHHHhh
Confidence 568999999996 3699999999999975 35799999999999999877765
No 26
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=97.77 E-value=0.00013 Score=63.78 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=72.9
Q ss_pred CCCCCeeEEEeC-CCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCCCC
Q 010937 104 YSVGSKCRFRYN-DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTS 182 (497)
Q Consensus 104 ~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~pd 182 (497)
-.+|.+|+|+|+ +|-||++.|+...+...++|.|.- |..|... ...|--
T Consensus 5 ~~~G~rV~AkWsdn~~yYpG~V~~~~~~~ky~V~FdD-------------------g~~~~v~------~k~iiv----- 54 (123)
T 2g3r_A 5 SFVGLRVVAKWSSNGYFYSGKITRDVGAGKYKLLFDD-------------------GYECDVL------GKDILL----- 54 (123)
T ss_dssp CCTTCEEEEECTTTCCEEEEEEEEEEETTEEEEEETT-------------------SCEEEEE------GGGEEC-----
T ss_pred cccceEEEEEeccCCcCcccEEEEeccCCeEEEEEcC-------------------CCeeEee------cceEEE-----
Confidence 478999999999 567999999998888899999986 4454321 111110
Q ss_pred cccccCCCeEEEeecCCCCceEeeEEeee--eCCCceEEEEEeCCCCceeeccccccccc
Q 010937 183 WEQSLVGSTIWALSDDKVGIWRKAELGSW--DDEHRMGEVVFRDDGSSAKLGIEAMTLSE 240 (497)
Q Consensus 183 ~~~l~~Gs~~la~~~~~dglW~~a~i~~~--d~~~~~~~V~f~~~g~~~~~~~d~~~~~e 240 (497)
-..|.+|..|+|. ..|..+..++|..+ +.+.-.|.|.- +|....++...|+|++
T Consensus 55 ~d~ip~g~~V~A~--teddy~~~GiI~~~k~~~~e~~Y~Ve~--dG~~~~~~~~~viLs~ 110 (123)
T 2g3r_A 55 CDPIPLDTEVTAL--SEDEYFSAGVVKGHRKESGELYYSIEK--EGQRKWYKRMAVILSL 110 (123)
T ss_dssp CSSCCTTCEEEEE--CTTSCEEEEEEEEEEEETTEEEEEEEE--TTEEEEEEGGGEEBCH
T ss_pred ecccCCCcEEEEe--ecCccccceEEEEEecCCCeEEEEEEe--CCcEEEEEeeeEEeCH
Confidence 1234479999998 46899999999854 23336678874 5666667767777654
No 27
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=97.77 E-value=7.5e-05 Score=65.53 Aligned_cols=107 Identities=16% Similarity=0.144 Sum_probs=75.5
Q ss_pred CCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCCCC
Q 010937 103 RYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPTS 182 (497)
Q Consensus 103 ~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~pd 182 (497)
...+|++|.|+|.+|.||.|+|++++.-.-+.|.|.- |+-|. .++.++|..+....
T Consensus 5 ~v~vGq~V~akh~ngryy~~~V~~~~~~~~y~V~F~D-------------------gS~s~-----dl~peDIvs~dc~~ 60 (118)
T 2qqr_A 5 SITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDD-------------------GSFSD-----NLYPEDIVSQDCLQ 60 (118)
T ss_dssp CCCTTCEEEEECTTSSEEEEEEEEEEEEEEEEEEETT-------------------SCEEE-----EECGGGBCSSCHHH
T ss_pred eeccCCEEEEECCCCCEEeEEEEEEeeEEEEEEEcCC-------------------CCccC-----CCCHhhcccccccc
Confidence 5789999999999999999999999766668888864 33332 34455555544211
Q ss_pred cccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 183 WEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 183 ~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
.-.-.+|..|.++ -.||.=|.|+...... ...|+|.|+++ +...++-+.|.
T Consensus 61 ~GpP~~G~~V~V~--W~DG~~y~a~f~g~~~-~~~Y~V~feDg-s~~~~kR~~iy 111 (118)
T 2qqr_A 61 FGPPAEGEVVQVR--WTDGQVYGAKFVASHP-IQMYQVEFEDG-SQLVVKRDDVY 111 (118)
T ss_dssp HCCCCTTCEEEEE--CTTSCEEEEEEEEEEE-EEEEEEEETTS-CEEEECGGGEE
T ss_pred cCCCCCCCEEEEE--cCCCCEeeeEEeceeE-EEEEEEEECCC-CEEEEcHHHee
Confidence 1122479999998 5699999999986442 26799999864 45666544443
No 28
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=97.73 E-value=3.4e-05 Score=68.18 Aligned_cols=108 Identities=19% Similarity=0.127 Sum_probs=76.7
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCCC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPT 181 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~p 181 (497)
....+|++|.|+|.+|.||.++|++++.-.-+.|.|.- |.-|. .+..++|..+...
T Consensus 5 ~~v~vGq~V~ak~~ngryy~~~V~~~~~~~~y~V~F~D-------------------gS~s~-----dl~PedIvs~dc~ 60 (123)
T 2xdp_A 5 KVISVGQTVITKHRNTRYYSCRVMAVTSQTFYEVMFDD-------------------GSFSR-----DTFPEDIVSRDCL 60 (123)
T ss_dssp CCCCTTCCCCCCCCCCCCCCCEEEEEEEEEEEEEEETT-------------------SCEEE-----EECGGGBCSSCHH
T ss_pred cccccCCEEEEECCCCcEEeEEEEEEeeEEEEEEEcCC-------------------CCccC-----CCCHhHccccccc
Confidence 35789999999999999999999999876668888865 32332 3444444444321
Q ss_pred CcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 182 SWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 182 d~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
..-.-.+|+.|.++ -.||.=|.|....... ...|+|.|+++ +...++-+.|.
T Consensus 61 ~~GpP~~G~~V~V~--W~DG~~y~a~f~g~~~-~~~YtV~FeDg-s~~~~kR~~iy 112 (123)
T 2xdp_A 61 KLGPPAEGEVVQVK--WPDGKLYGAKYFGSNI-AHMYQVEFEDG-SQIAMKREDIY 112 (123)
T ss_dssp HHCCCCTTCEEEEE--CTTSCEEEEEEEEEEE-EEEEEEECTTS-CEEEEEGGGCC
T ss_pred ccCCCCCCCEEEEE--cCCCCEEeEEEeeeee-EEEEEEEECCC-CeEEecHHHcc
Confidence 11233589999999 5699999999986643 26799999865 56666544444
No 29
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=97.68 E-value=5.7e-05 Score=59.08 Aligned_cols=40 Identities=13% Similarity=0.309 Sum_probs=32.9
Q ss_pred ccCCCCCCeeEEEeC-CCceeeeEEEeecc-CCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRYN-DGRWYDGRIIGLEE-TDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~-~~~vrV~Fl~p 140 (497)
...|.+|+.|||+|+ |..||+|+|++|+. +.-+.|.|-.-
T Consensus 7 ~~~~~vgd~VmaRW~Gd~~yYparI~Si~s~~~~Y~V~fKdg 48 (66)
T 2l8d_A 7 NRKYADGEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKDG 48 (66)
T ss_dssp SSSSCSSCEEEEECTTSSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred ceEeecCCEEEEEcCCCccceEEEEEEeccCCceEEEEecCC
Confidence 568999999999996 55799999999984 34578888663
No 30
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.63 E-value=6.9e-05 Score=64.42 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=44.0
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
.+.+|..|+|++ ..||.||||+|.+++.+ +.+.|.|-++|+...|+...|.
T Consensus 32 ~~~~G~~c~a~~-~~d~~wyRA~V~~~~~~-~~~~V~fvDyGn~e~v~~~~Lr 82 (110)
T 2diq_A 32 TVHVGDIVAAPL-PTNGSWYRARVLGTLEN-GNLDLYFVDFGDNGDCPLKDLR 82 (110)
T ss_dssp CCCTTCEEEECC-TTTCSCEEEEECCCCSS-SCEEEEETTTCCEEEECGGGCE
T ss_pred CCCCCCEEEEEE-CCCCeEEEEEEEEECCC-CeEEEEEEeCCCeEEEehHHhh
Confidence 567999999985 25899999999999864 5799999999999999877766
No 31
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.55 E-value=9.6e-05 Score=57.98 Aligned_cols=39 Identities=15% Similarity=0.373 Sum_probs=32.1
Q ss_pred ccCCCCCCeeEEEeC-CCceeeeEEEeecc-CCceEEEEec
Q 010937 101 DQRYSVGSKCRFRYN-DGRWYDGRIIGLEE-TDSAKVSFLR 139 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~-~~~vrV~Fl~ 139 (497)
...|.+|+.|||+|. |..||+|+|++|+. +.-+.|.|-.
T Consensus 10 ~~~f~vgd~VmaRW~Gd~~yYparItSits~~~~Y~VkfKd 50 (68)
T 2dig_A 10 SRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKD 50 (68)
T ss_dssp CCSSCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEECTT
T ss_pred ceEeecCCEEEEEccCCccceEEEEEEeccCCceEEEEecC
Confidence 578999999999998 55699999999984 3356777765
No 32
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=97.50 E-value=0.0008 Score=59.88 Aligned_cols=108 Identities=15% Similarity=0.226 Sum_probs=74.6
Q ss_pred CCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCC-CcccCcccccccCCCC
Q 010937 104 YSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSH-GIDVPLSFLKKYVPTS 182 (497)
Q Consensus 104 ~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sH-g~~v~~~~L~~~~~pd 182 (497)
+.-++.+..+-.+|.||.|.|..|..+ .+.|.|.+ + .. -..|+++.+|+-.+++
T Consensus 2 ~~~~~~VEV~~~~G~~y~a~V~~v~~d-~~~V~f~n----------------------~--w~~~~~vp~~~vRlpP~~~ 56 (128)
T 3h8z_A 2 YFQGLPVEVRGSNGAFYKGFVKDVHED-SVTIFFEN----------------------N--WQSERQIPFGDVRLPPPAD 56 (128)
T ss_dssp TTTTCEEEEECTTSCEEEEEEEEECSS-EEEEEETT----------------------C--TTCCEEEEGGGEECCCCC-
T ss_pred cccccEEEEecCCCCEEEEEEEEEeCC-cEEEEEcc----------------------c--cCcceEechhhEEcCCCcc
Confidence 345677777777899999999999655 59999954 1 12 2578899999877664
Q ss_pred c-ccccCCCeEEEeecCCC---CceEeeEEeeeeCCCceEEEEEeCCCCce--eeccccccc
Q 010937 183 W-EQSLVGSTIWALSDDKV---GIWRKAELGSWDDEHRMGEVVFRDDGSSA--KLGIEAMTL 238 (497)
Q Consensus 183 ~-~~l~~Gs~~la~~~~~d---glW~~a~i~~~d~~~~~~~V~f~~~g~~~--~~~~d~~~~ 238 (497)
. ..+.+|+.|=+-+..++ --|+.|+|..+.. ..|.|.|.+.+.+. .|+.+.|.+
T Consensus 57 ~~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg--~f~~V~y~~~~~~~~EiV~~~rlR~ 116 (128)
T 3h8z_A 57 YNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKG--DFYVIEYAACDATYNEIVTLERLRP 116 (128)
T ss_dssp ---CCCTTCEEEEEECC---CCCEEEEEEEEEEET--TEEEEEETTC----CEEECGGGEEE
T ss_pred cccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeC--CEEEEEEcCCCCCcceEEehhheEe
Confidence 3 34589999988754322 1599999999986 78999998866532 456666554
No 33
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=97.50 E-value=0.00014 Score=55.73 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=32.9
Q ss_pred CCCCCCeeEEEeCCCceeeeEEEeeccCC-ceEEEEec
Q 010937 103 RYSVGSKCRFRYNDGRWYDGRIIGLEETD-SAKVSFLR 139 (497)
Q Consensus 103 ~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~-~vrV~Fl~ 139 (497)
.+.+|+.|+|+|+||.||.|+|+.|.... .+-|.|--
T Consensus 3 ~f~~GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D 40 (58)
T 4hcz_A 3 RLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFED 40 (58)
T ss_dssp SCCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETT
T ss_pred ccccCCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcC
Confidence 58899999999999999999999998764 78888865
No 34
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=97.39 E-value=0.00055 Score=65.52 Aligned_cols=97 Identities=15% Similarity=0.123 Sum_probs=73.3
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeecc---CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccccccc
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEE---TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKY 178 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~---~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~ 178 (497)
.+..||+.+.|+|.++.||-++|+.|.. +..+.|.|++. + . ..|+...|--.
T Consensus 7 ~~l~Vg~~vlg~k~~~~W~rg~v~~I~~~~~g~~YkVkF~~~------------------g-~------~ivs~~hiA~~ 61 (213)
T 3dlm_A 7 GDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNK------------------G-K------SLLSGNHIAYD 61 (213)
T ss_dssp TTEETTCEEEEECTTSBEEEEEEEEEEEETTEEEEEEEESSS------------------C-E------EEECGGGEEES
T ss_pred CcEEEccEEEEEecCCcEEEEEEEEEEECCCCeEEEEEEcCC------------------C-C------EEeecceEEEe
Confidence 4578999999999999999999999854 33589999852 1 1 24565666554
Q ss_pred CCCCcccccCCCeEEEeecCCCC---ceEeeEEeeeeCCC--ceEEEEEeCC
Q 010937 179 VPTSWEQSLVGSTIWALSDDKVG---IWRKAELGSWDDEH--RMGEVVFRDD 225 (497)
Q Consensus 179 ~~pd~~~l~~Gs~~la~~~~~dg---lW~~a~i~~~d~~~--~~~~V~f~~~ 225 (497)
.+|....|.+|++|.|.+. ++ -.|.++|...+... ..|-|.|+++
T Consensus 62 ~~p~~~~l~vG~RVVA~~~--~~~~~~fY~GiVaE~p~~~N~~RyLVFFDDG 111 (213)
T 3dlm_A 62 YHPPADKLYVGSRVVAKYK--DGNQVWLYAGIVAETPNVKNKLRFLIFFDDG 111 (213)
T ss_dssp SCCCGGGCCTTCEEEEEEE--CSSCEEEEEEEEEECCCTTTTSCEEEEETTS
T ss_pred cCCCccEEeEEEEEEEEec--CCCCcceeeeEEEECCccCCCceEEEEEeCC
Confidence 5777889999999999975 43 47888998887643 5677888754
No 35
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=97.38 E-value=0.00039 Score=66.91 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=43.5
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
.+.+|..|+|++ ..||.||||+|.++..+ +.+.|.|-|+|+...|+...|.
T Consensus 65 ~~~~G~~c~a~~-~~d~~WyRa~V~~~~~~-~~~~V~~vDyGn~~~v~~~~l~ 115 (226)
T 4b9x_A 65 KAEIGRPCCAFF-SGDGNWYRALVKEILPS-GNVKVHFVDYGNVEEVTTDQLQ 115 (226)
T ss_dssp CCCTTCEEEEEE-TTTTEEEEEEEEEECSS-SEEEEECTTTCCEEEEEGGGEE
T ss_pred CCCCCCEEEEEE-CCCCeEEEEEEEEECCC-CeEEEEEEecCCEEEEEHHHhc
Confidence 457899999997 46999999999999753 5699999999999999877665
No 36
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=97.37 E-value=0.00015 Score=66.90 Aligned_cols=38 Identities=18% Similarity=0.391 Sum_probs=34.6
Q ss_pred CCCCCCeeEEEeC-CCceeeeEEEeeccCCceEEEEecC
Q 010937 103 RYSVGSKCRFRYN-DGRWYDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 103 ~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
.+.+|+.|.|+|+ ||.||.|+|+++.+++.+.|+|+-.
T Consensus 47 ~~~~G~~c~A~~~~d~~wyRa~I~~~~~~~~~~V~fvDy 85 (169)
T 3ntk_A 47 DLKEGALCVAQFPEDEVFYRAQIRKVLDDGKCEVHFIDF 85 (169)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEECSTTCEEEEETTT
T ss_pred CCCCCCEEEEEECCCCcEEEEEEEEECCCCEEEEEEEec
Confidence 5799999999996 9999999999998877899999874
No 37
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.30 E-value=0.00018 Score=59.53 Aligned_cols=55 Identities=20% Similarity=0.428 Sum_probs=46.5
Q ss_pred ccCCCCCCeeEEEeCCC-ceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccC
Q 010937 101 DQRYSVGSKCRFRYNDG-RWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYV 179 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG-~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~ 179 (497)
...|.+|+-|-|.++++ .||-|.|..+.....+.|+|+- ||.. .+|++..||+..
T Consensus 19 ~~~~k~g~~vaak~~d~n~WyRakV~~v~~~~~veVl~~D------------------yGn~------~~V~~~~LR~L~ 74 (85)
T 2eqk_A 19 PVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYD------------------VGVE------LVVNVDCLRKLE 74 (85)
T ss_dssp CCCCCSSCEEEEECSSSCCEEEEEEEEECSSSEEEEECTT------------------TCCE------EEEETTTEEECC
T ss_pred ccCccCCCEEEEEeCCCCeEEEEEEEEecCCCeEEEEEEc------------------cCCE------EEEEccccccCC
Confidence 56799999999999955 8999999999887789999976 5643 678888888876
No 38
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=97.30 E-value=0.00033 Score=66.19 Aligned_cols=60 Identities=20% Similarity=0.443 Sum_probs=46.9
Q ss_pred CCCCCCeeEEEeC-CCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCCC
Q 010937 103 RYSVGSKCRFRYN-DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPT 181 (497)
Q Consensus 103 ~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~p 181 (497)
...+|+-|.|+|+ ||.||.|+|+++.+++.+.|+|+- ||.. ..|+.+.|++.. +
T Consensus 65 ~~~~G~~c~a~~~~d~~wyRa~V~~~~~~~~~~V~~vD------------------yG~~------~~v~~~~l~~l~-~ 119 (201)
T 4b9w_A 65 KAEIGRPCCAFFSGDGNWYRALVKEILPSGNVKVHFVD------------------YGNV------EEVTTDQLQAIL-P 119 (201)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEECTTSCEEEEETT------------------TCCE------EEECGGGEEECC-G
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEc------------------cCCE------EEEEHHHhccCh-H
Confidence 3578999999997 999999999999887789999987 5633 557777777764 4
Q ss_pred Cccccc
Q 010937 182 SWEQSL 187 (497)
Q Consensus 182 d~~~l~ 187 (497)
+|..+.
T Consensus 120 ~f~~lP 125 (201)
T 4b9w_A 120 QFLLLP 125 (201)
T ss_dssp GGGSSC
T ss_pred hHcccc
Confidence 455543
No 39
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=97.28 E-value=0.00023 Score=67.23 Aligned_cols=58 Identities=16% Similarity=0.422 Sum_probs=46.6
Q ss_pred CCCCCCeeEEEeC-CCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCCC
Q 010937 103 RYSVGSKCRFRYN-DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPT 181 (497)
Q Consensus 103 ~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~p 181 (497)
.+.+|+.|.|+|+ ||.||.|+|+++.+ ..+.|+|+- ||.. ..|+++.|++.. +
T Consensus 51 ~~~~g~~c~a~~~~d~~wyRa~V~~v~~-~~~~V~~vD------------------yG~~------~~v~~~~l~~l~-~ 104 (218)
T 2wac_A 51 TPKRGDLVAAQFTLDNQWYRAKVERVQG-SNATVLYID------------------YGNK------ETLPTNRLAALP-P 104 (218)
T ss_dssp CCCTTCEEEEECTTTCCEEEEEEEEEET-TEEEEEETT------------------TCCE------EEEEGGGEEECC-G
T ss_pred cCCcCCEEEEEECCCCeEEEEEEEEecC-CeEEEEEEe------------------cCCe------EEEchHHcccCC-h
Confidence 4789999999998 89999999999987 679999987 5533 567778888775 4
Q ss_pred Ccccc
Q 010937 182 SWEQS 186 (497)
Q Consensus 182 d~~~l 186 (497)
+|..+
T Consensus 105 ~~~~~ 109 (218)
T 2wac_A 105 AFSSE 109 (218)
T ss_dssp GGSSS
T ss_pred hhccC
Confidence 55544
No 40
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=97.27 E-value=0.00024 Score=68.86 Aligned_cols=38 Identities=24% Similarity=0.524 Sum_probs=34.1
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEec
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLR 139 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~ 139 (497)
..+.+|+.|.|+|+||.||.|+|+.+.++..+.|+|+-
T Consensus 64 ~~~~~G~~c~a~~~d~~wyRa~V~~~~~~~~~~V~~vD 101 (246)
T 2hqx_A 64 YAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYID 101 (246)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEEEEEETTEEEEEETT
T ss_pred CCCCCCCEEEEEcCCCCEEEEEEEEEcCCCeEEEEEEe
Confidence 35689999999999999999999999866689999987
No 41
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=97.26 E-value=0.00045 Score=65.25 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=43.6
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
.+.+|..|+|++ ..||.||||+|.++..+ +.+.|.|-|+|+...|+...|.
T Consensus 65 ~~~~G~~c~a~~-~~d~~wyRa~V~~~~~~-~~~~V~~vDyG~~~~v~~~~l~ 115 (201)
T 4b9w_A 65 KAEIGRPCCAFF-SGDGNWYRALVKEILPS-GNVKVHFVDYGNVEEVTTDQLQ 115 (201)
T ss_dssp CCCTTCEEEEEE-TTTTEEEEEEEEEECTT-SCEEEEETTTCCEEEECGGGEE
T ss_pred CCCCCCEEEEEE-CCCCeEEEEEEEEECCC-CeEEEEEEccCCEEEEEHHHhc
Confidence 467899999997 46999999999999753 5689999999999999877665
No 42
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.16 E-value=0.00086 Score=65.00 Aligned_cols=88 Identities=16% Similarity=0.380 Sum_probs=64.5
Q ss_pred CCCCCeeEEEeC-CCceeeeEEEeeccCC----------ceEEEEecCCCccccchhhhhhccccCCCccccCCC-cccC
Q 010937 104 YSVGSKCRFRYN-DGRWYDGRIIGLEETD----------SAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHG-IDVP 171 (497)
Q Consensus 104 ~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~----------~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg-~~v~ 171 (497)
|.||+.+-|+.. .|-||.|.|+.|+..+ .+.|.|.. |.+ || ..+.
T Consensus 3 yki~~~vd~~d~~~Gawfea~i~~v~~~~~~~~~~~d~~~y~v~y~~------------------~~~-----~~~~~~~ 59 (226)
T 3ask_A 3 YKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRPALEEDVIYHVKYDD------------------YPE-----NGVVQMN 59 (226)
T ss_dssp SCTTCEEEEECTTTCCEEEEEEEEEEECC------CCCEEEEEEETT------------------CGG-----GCEEEEE
T ss_pred cccCceEEeeecCCCceeEEEEEEEeccccccCCCCCceEEEeeccc------------------Ccc-----cCceecc
Confidence 789999999996 8999999999886411 23444433 222 22 3455
Q ss_pred cccccccC--CCCcccccCCCeEEEeecC----CCCceEeeEEeeeeCC
Q 010937 172 LSFLKKYV--PTSWEQSLVGSTIWALSDD----KVGIWRKAELGSWDDE 214 (497)
Q Consensus 172 ~~~L~~~~--~pd~~~l~~Gs~~la~~~~----~dglW~~a~i~~~d~~ 214 (497)
...|++-. ...|..|.+|..+++.+.- .+|.||.|.|+.+...
T Consensus 60 ~~~irprar~~~~~~~l~~g~~vm~nyn~~~~~~~G~~y~~~I~~~~~~ 108 (226)
T 3ask_A 60 SRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRET 108 (226)
T ss_dssp GGGEEECCCCBCCGGGCCTTCEEEEEECTTSTTSCCEEEEEEEEEEEEC
T ss_pred cccccccccccCCccccccCcEEEEecccCCccccCceeehhhhhhhhc
Confidence 66677643 5578999999999998721 5899999999998864
No 43
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=97.02 E-value=0.00062 Score=65.50 Aligned_cols=38 Identities=24% Similarity=0.572 Sum_probs=33.9
Q ss_pred CCCCCCeeEEEeC-CCceeeeEEEeeccCCceEEEEecC
Q 010937 103 RYSVGSKCRFRYN-DGRWYDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 103 ~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
...+|+-|.|+|. ||.||.|+|+++.+++.+.|+|+-.
T Consensus 65 ~~~~G~~c~a~~~~d~~WyRa~V~~~~~~~~~~V~~vDy 103 (226)
T 4b9x_A 65 KAEIGRPCCAFFSGDGNWYRALVKEILPSGNVKVHFVDY 103 (226)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEECSSSEEEEECTTT
T ss_pred CCCCCCEEEEEECCCCeEEEEEEEEECCCCeEEEEEEec
Confidence 3578999999997 9999999999998877899999873
No 44
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=97.01 E-value=0.0002 Score=57.52 Aligned_cols=26 Identities=31% Similarity=0.811 Sum_probs=22.5
Q ss_pred cccchhhhhhccccCCCccccCCCcc
Q 010937 144 NMLMCKFFLQQRCRFGTNCRLSHGID 169 (497)
Q Consensus 144 ~~~pC~~fl~g~C~f~~~Cr~sHg~~ 169 (497)
...+|+|||+|.|+.|++|+|||...
T Consensus 15 k~~vCk~fl~G~C~~G~~C~fsH~~~ 40 (72)
T 2rhk_C 15 KTVVCKHWLRGLCKKGDQCEFLHEYD 40 (72)
T ss_dssp CCSBCHHHHTTCCCCGGGSSSBCSCC
T ss_pred cCeeCHHHhcCCCCCCCCCCCccccc
Confidence 45679999999999999999999753
No 45
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=97.01 E-value=0.0014 Score=52.92 Aligned_cols=39 Identities=26% Similarity=0.372 Sum_probs=33.7
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccC-CceEEEEec
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEET-DSAKVSFLR 139 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~-~~vrV~Fl~ 139 (497)
...|..|+.|.|+|+||.||.++|+.|... ..|-|.|.-
T Consensus 24 ~~~f~eGeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D 63 (79)
T 2m0o_A 24 RPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFED 63 (79)
T ss_dssp CCCCCTTCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETT
T ss_pred cceeccCCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcC
Confidence 468999999999999999999999999764 458888865
No 46
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=96.96 E-value=0.0016 Score=50.94 Aligned_cols=52 Identities=17% Similarity=0.285 Sum_probs=44.9
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
...+|..|+|+- ..|.++|+|+|+++|+....|+|+|.+ |....|....|-|
T Consensus 9 ~~~vgd~VmaRW-~Gd~~yYparI~Si~s~~~~Y~V~fKd-gT~e~L~~kDIkp 60 (66)
T 2l8d_A 9 KYADGEVVMGRW-PGSVLYYEVQVTSYDDASHLYTVKYKD-GTELALKESDIRL 60 (66)
T ss_dssp SSCSSCEEEEEC-TTSSCEEEEEEEEEETTTTEEEEEETT-SCEEEEEGGGEEC
T ss_pred EeecCCEEEEEc-CCCccceEEEEEEeccCCceEEEEecC-CCEEeechhcccc
Confidence 346899999997 579999999999999999999999999 8888887666654
No 47
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.95 E-value=0.001 Score=51.53 Aligned_cols=39 Identities=26% Similarity=0.441 Sum_probs=33.0
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccC-CceEEEEec
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEET-DSAKVSFLR 139 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~-~~vrV~Fl~ 139 (497)
...|.+|+.|+|+|+||.||.+.|+.|... ..|-|.|--
T Consensus 5 ~~~f~eGqdVLarWsDGlfYlgtV~kV~~~~~~ClV~FeD 44 (63)
T 2e5q_A 5 SSGLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFED 44 (63)
T ss_dssp CCCCCTTCEEEEECTTSCEEEEEECCCCSTTSEEEEEETT
T ss_pred ccceecCCEEEEEecCCCEEEEEEEEEecCCCEEEEEEcc
Confidence 346999999999999999999999999865 457787754
No 48
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=96.01 E-value=0.00012 Score=63.35 Aligned_cols=90 Identities=19% Similarity=0.213 Sum_probs=69.7
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCCC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPT 181 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~p 181 (497)
.-..||+.+.|+| -|-|++|+|..+.-.-.++|+|-.+- + +..|.-..|
T Consensus 5 p~L~VGTeVSAKy-rGAFCEAkIk~V~r~vKcKV~~k~~~----------------~--------~~~v~d~~i------ 53 (118)
T 2lcd_A 5 AYLTVGTDVSAKY-RGAFCEAKIKTVKRLVKVKVLLKQDN----------------T--------TQLVQDDQV------ 53 (118)
Confidence 3468999999999 58999999999998888999997641 0 111221222
Q ss_pred CcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 182 SWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 182 d~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
.-.|.+|+.+-++ ++++-|.+|+|..+.+. -.|+|+|+++.
T Consensus 54 -kG~l~vG~~ve~~--~~~~~~~~~~I~~i~D~-S~YtVVFdDGD 94 (118)
T 2lcd_A 54 -KGPLRVGAIVETR--TSDGSFQEAIISKLTDA-SWYTVVFDDGD 94 (118)
Confidence 2478899999998 56889999999999864 57999999754
No 49
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=96.90 E-value=0.0012 Score=60.83 Aligned_cols=46 Identities=22% Similarity=0.148 Sum_probs=39.6
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceee
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKL 231 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~ 231 (497)
....+|..|+|++ ..||.||||+|.++..+ +.+.|.|-++|+...+
T Consensus 46 ~~~~~G~~c~A~~-~~d~~wyRa~I~~~~~~-~~~~V~fvDyGn~~~v 91 (169)
T 3ntk_A 46 SDLKEGALCVAQF-PEDEVFYRAQIRKVLDD-GKCEVHFIDFGNNAVT 91 (169)
T ss_dssp CCCCTTCEEEEEE-TTTTEEEEEEEEEECST-TCEEEEETTTTEEEEE
T ss_pred CCCCCCCEEEEEE-CCCCcEEEEEEEEECCC-CEEEEEEEecCCeEEh
Confidence 4678999999996 35999999999999875 3799999999998774
No 50
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.90 E-value=0.0015 Score=51.40 Aligned_cols=38 Identities=26% Similarity=0.385 Sum_probs=32.4
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccC-CceEEEEec
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEET-DSAKVSFLR 139 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~-~~vrV~Fl~ 139 (497)
..|.+|+.|+|+|+||.||.++|..|... ..+-|.|--
T Consensus 8 ~~f~eGqdVLarWsDGlfYlGtV~kV~~~~~~ClV~FeD 46 (68)
T 2e5p_A 8 PRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFED 46 (68)
T ss_dssp CCCCTTCEEEEECTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred cccccCCEEEEEecCCcEEEeEEEEEecCCcEEEEEEcc
Confidence 46899999999999999999999999864 357787743
No 51
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=96.88 E-value=0.0017 Score=50.93 Aligned_cols=51 Identities=16% Similarity=0.239 Sum_probs=43.8
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
...+|..|||+-. .|.++|+|+|+++|.....|+|+|.+ |....|....|-
T Consensus 12 ~f~vgd~VmaRW~-Gd~~yYparItSits~~~~Y~VkfKd-gT~e~L~~kDIK 62 (68)
T 2dig_A 12 KFADGEVVRGRWP-GSSLYYEVEILSHDSTSQLYTVKYKD-GTELELKENDIK 62 (68)
T ss_dssp SSCSSCEEEEECT-TTCCEEEEEEEEEETTTTEEEEECTT-SCEEEEETTTEE
T ss_pred EeecCCEEEEEcc-CCccceEEEEEEeccCCceEEEEecC-CCEEEechhccc
Confidence 3468999999974 79999999999999999999999999 888787655554
No 52
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.86 E-value=0.00044 Score=55.98 Aligned_cols=27 Identities=30% Similarity=0.801 Sum_probs=23.0
Q ss_pred cccchhhhhhccccCCCccccCCCccc
Q 010937 144 NMLMCKFFLQQRCRFGTNCRLSHGIDV 170 (497)
Q Consensus 144 ~~~pC~~fl~g~C~f~~~Cr~sHg~~v 170 (497)
...+|+|||+|.|+.|++|+|+|....
T Consensus 9 k~~~C~~fl~G~C~~G~~C~fsH~~~~ 35 (77)
T 2d9n_A 9 KTVVCKHWLRGLCKKGDQCEFLHEYDM 35 (77)
T ss_dssp TTSBCHHHHTTCCSCTTSSSSBCSCCT
T ss_pred cceeCHhHccCcCCCCCCCCCcccccc
Confidence 456799999999999999999997653
No 53
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=96.83 E-value=0.0019 Score=50.84 Aligned_cols=46 Identities=15% Similarity=0.093 Sum_probs=38.5
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceee
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKL 231 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~ 231 (497)
....+|.-|||. +.||+.|.|+|.+|+...+.|.|+|.+.-+.-++
T Consensus 12 ~~f~vGddVLA~--wtDGl~Y~gtI~~V~~~~gtC~V~F~D~s~~w~~ 57 (66)
T 2eqj_A 12 CKFEEGQDVLAR--WSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVL 57 (66)
T ss_dssp CCSCTTCEEEEE--CTTSCEEEEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred ccccCCCEEEEE--EccCcEEEeEEEEEccCCcEEEEEEccCCEEEEE
Confidence 356799999999 5699999999999999889999999876544343
No 54
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=96.78 E-value=0.0049 Score=56.37 Aligned_cols=101 Identities=14% Similarity=0.264 Sum_probs=62.3
Q ss_pred ccCCCCCCeeEEEeC-CCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCcccc--------CC-Cccc
Q 010937 101 DQRYSVGSKCRFRYN-DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRL--------SH-GIDV 170 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~--------sH-g~~v 170 (497)
-.-|.+|+.+-|+=. .|-|+.|.|+.|+-... + ...||.-.- .|.-.+.|-| .+ ...+
T Consensus 8 ~glYKinelVDarD~~~GAWFEA~Iv~Vtr~~~--------~--~~~p~~s~~--~~~~~edviYhVkyddype~gvv~~ 75 (161)
T 3db3_A 8 LGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAP--------S--RDEPCSSTS--RPALEEDVIYHVKYDDYPENGVVQM 75 (161)
T ss_dssp CCSSCTTCEEEEECTTTCCEEEEEEEEEEEC-----------------------------CCEEEEEEESSCGGGCEEEE
T ss_pred cceEEecceeeeeccCCCcceEEEEEEEEecCC--------C--CCCcccccc--cCCCcCceEEEEEeccCccCCeEec
Confidence 356899999999975 69999999998864211 0 011221100 1111122211 01 2356
Q ss_pred CcccccccC--CCCcccccCCCeEEEeecC----CCCceEeeEEeeeeC
Q 010937 171 PLSFLKKYV--PTSWEQSLVGSTIWALSDD----KVGIWRKAELGSWDD 213 (497)
Q Consensus 171 ~~~~L~~~~--~pd~~~l~~Gs~~la~~~~----~dglW~~a~i~~~d~ 213 (497)
++..+||-. ..+|+.|.+|..|.+.|.- .-|.||+|.|+....
T Consensus 76 ~~~~iRpRARt~l~w~~L~vGqvVMvNYN~d~PkerGfWYDaeI~~~~~ 124 (161)
T 3db3_A 76 NSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRE 124 (161)
T ss_dssp EGGGEECCCCCBCCGGGCCTTCEEEEEECSSSTTSCCEEEEEEEEEEEE
T ss_pred chhccccceEEeccHHHCCcCcEEEEecCCCCccccceeEEEEEeeehh
Confidence 677787744 5589999999999998741 249999999998753
No 55
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=96.76 E-value=0.002 Score=60.69 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=43.1
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
...+|..|+|++ ..||.||+|+|.++.. +.+.|.|-++|+...|+...|.
T Consensus 51 ~~~~g~~c~a~~-~~d~~wyRa~V~~v~~--~~~~V~~vDyG~~~~v~~~~l~ 100 (218)
T 2wac_A 51 TPKRGDLVAAQF-TLDNQWYRAKVERVQG--SNATVLYIDYGNKETLPTNRLA 100 (218)
T ss_dssp CCCTTCEEEEEC-TTTCCEEEEEEEEEET--TEEEEEETTTCCEEEEEGGGEE
T ss_pred cCCcCCEEEEEE-CCCCeEEEEEEEEecC--CeEEEEEEecCCeEEEchHHcc
Confidence 467999999995 2589999999999987 7799999999999999866655
No 56
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=96.76 E-value=0.00046 Score=58.56 Aligned_cols=25 Identities=32% Similarity=0.792 Sum_probs=22.7
Q ss_pred ccccchhhhhhccccCCCccccCCC
Q 010937 143 ENMLMCKFFLQQRCRFGTNCRLSHG 167 (497)
Q Consensus 143 ~~~~pC~~fl~g~C~f~~~Cr~sHg 167 (497)
..+.+|+||+.|.|++|.+|+|+|+
T Consensus 11 ~k~~lC~~f~~G~C~~G~~C~f~H~ 35 (98)
T 2cqe_A 11 KKRELCKFYITGFCARAENCPYMHG 35 (98)
T ss_dssp CCCSBCTTTTTTCCSCSTTCSSBSS
T ss_pred CCCccCcccccCcCCCCCCCCCCCC
Confidence 4567899999999999999999998
No 57
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.72 E-value=0.0028 Score=52.42 Aligned_cols=56 Identities=11% Similarity=0.054 Sum_probs=46.6
Q ss_pred CCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 181 TSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 181 pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
|..-..++|..|-|+.. .++-||||+|..++.+.. +.|.|=|+|++..|+.++|.+
T Consensus 17 ~~~~~~k~g~~vaak~~-d~n~WyRakV~~v~~~~~-veVl~~DyGn~~~V~~~~LR~ 72 (85)
T 2eqk_A 17 WEPVKWENDMHCAVKIQ-DKNQWRRGQIIRMVTDTL-VEVLLYDVGVELVVNVDCLRK 72 (85)
T ss_dssp CCCCCCCSSCEEEEECS-SSCCEEEEEEEEECSSSE-EEEECTTTCCEEEEETTTEEE
T ss_pred CcccCccCCCEEEEEeC-CCCeEEEEEEEEecCCCe-EEEEEEccCCEEEEEcccccc
Confidence 33446689999999964 456999999999998755 999999999999999888764
No 58
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=96.68 E-value=0.0024 Score=61.76 Aligned_cols=50 Identities=18% Similarity=0.154 Sum_probs=42.6
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
...+|..|+|++ .||.||+|+|.+++.+ +.+.|.|-++|+...|+...|.
T Consensus 65 ~~~~G~~c~a~~--~d~~wyRa~V~~~~~~-~~~~V~~vDyGn~~~v~~~~lr 114 (246)
T 2hqx_A 65 APRRGEFCIAKF--VDGEWYRARVEKVESP-AKIHVFYIDYGNREVLPSTRLG 114 (246)
T ss_dssp CCCTTCEEEEEC--TTSCEEEEEEEEEEET-TEEEEEETTTCCEEEECGGGEE
T ss_pred CCCCCCEEEEEc--CCCCEEEEEEEEEcCC-CeEEEEEEeCCCeEEEeHHHhh
Confidence 456999999995 3899999999999854 5799999999999999866655
No 59
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=96.63 E-value=0.0015 Score=70.95 Aligned_cols=60 Identities=20% Similarity=0.440 Sum_probs=48.9
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCCC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVPT 181 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~p 181 (497)
..+.+|+.|.|+|+||.||.|+|+.+.+...|.|+|+- ||+. ..|+++.|++.. +
T Consensus 410 ~~~~~G~~c~a~~~d~~wyRa~I~~v~~~~~~~V~fvD------------------yGn~------e~v~~~~Lr~l~-~ 464 (570)
T 3bdl_A 410 YAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYID------------------YGNR------EVLPSTRLGTLS-P 464 (570)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEEEEEETTEEEEEETT------------------TCCE------EEECGGGEECCC-G
T ss_pred cCCCcCCEEEEEECCCCEEEEEEEEEcCCCeEEEEEEe------------------CCCe------EEEEHHHCccCC-H
Confidence 35789999999999999999999999887789999987 5643 568888888876 4
Q ss_pred Ccccc
Q 010937 182 SWEQS 186 (497)
Q Consensus 182 d~~~l 186 (497)
+|..+
T Consensus 465 ~f~~l 469 (570)
T 3bdl_A 465 AFSTR 469 (570)
T ss_dssp GGSTT
T ss_pred HHhcC
Confidence 56544
No 60
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=96.55 E-value=0.00075 Score=54.02 Aligned_cols=26 Identities=31% Similarity=1.025 Sum_probs=22.8
Q ss_pred cccchhhhh-hccccCCCccccCCCcc
Q 010937 144 NMLMCKFFL-QQRCRFGTNCRLSHGID 169 (497)
Q Consensus 144 ~~~pC~~fl-~g~C~f~~~Cr~sHg~~ 169 (497)
.+.+|++|+ .|.|+||.+|+|+|+..
T Consensus 11 kt~~C~~f~~~G~C~~G~~C~f~H~~~ 37 (77)
T 1m9o_A 11 KTELCRTYSESGRCRYGAKCQFAHGLG 37 (77)
T ss_dssp CSCCCSGGGGTSCCTTTTTCSSCSSSC
T ss_pred cchhCHHhhhCCCcCCCCCccCCCCCh
Confidence 457899996 79999999999999864
No 61
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=96.54 E-value=0.006 Score=48.25 Aligned_cols=38 Identities=26% Similarity=0.441 Sum_probs=31.3
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEec
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLR 139 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~ 139 (497)
...|.+|+.|.|+|+||.||-++|+..... .+-|.|.-
T Consensus 13 a~~~~~geDVL~rw~DG~fYLGtIVd~~~~-~ClV~FeD 50 (69)
T 2xk0_A 13 AVTYALQEDVFIKCNDGRFYLGTIIDQTSD-QYLIRFDD 50 (69)
T ss_dssp CCCCCTTCEEEEECTTSCEEEEEEEEECSS-CEEEEETT
T ss_pred ccccccCCeEEEEecCCCEEEEEEEecCCc-eEEEEecC
Confidence 378999999999999999999999765433 57777765
No 62
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=96.50 E-value=0.00076 Score=57.22 Aligned_cols=24 Identities=29% Similarity=0.668 Sum_probs=21.7
Q ss_pred ccchhhhh-hccccCCCccccCCCc
Q 010937 145 MLMCKFFL-QQRCRFGTNCRLSHGI 168 (497)
Q Consensus 145 ~~pC~~fl-~g~C~f~~~Cr~sHg~ 168 (497)
+.||+||+ .|.|.||.+|+|+|..
T Consensus 36 ~~~C~~f~~~G~C~~G~~C~f~H~~ 60 (98)
T 2cqe_A 36 DFPCKLYHTTGNCINGDDCMFSHDP 60 (98)
T ss_dssp SSBCSHHHHTSCCSSCTTCSSBCCC
T ss_pred CCcCcCcccCCcCCCCCCCcccCCC
Confidence 57899996 7999999999999974
No 63
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.27 E-value=0.0017 Score=51.77 Aligned_cols=29 Identities=24% Similarity=0.737 Sum_probs=25.3
Q ss_pred cchhhhhhccccCCCccccCCCcccCccccccc
Q 010937 146 LMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKY 178 (497)
Q Consensus 146 ~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~ 178 (497)
..|..|..|.|.||++|.|-||.. +|+.+
T Consensus 21 ~LC~~~~~G~C~~G~~C~FAHG~~----ELr~~ 49 (69)
T 2d9m_A 21 SICDRYMNGTCPEGNSCKFAHGNA----ELHEW 49 (69)
T ss_dssp SBCHHHHHSCCSSCSSCSSBSSHH----HHHHH
T ss_pred ccCcccCcCCCCCCCccCCcCCHH----HHhhH
Confidence 789999999999999999999973 66654
No 64
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=96.26 E-value=0.0098 Score=45.56 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=36.0
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSS 228 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~ 228 (497)
.+.+|.-|||+ ..||++|.|+|.+|+...+.|.|.|.+.-+.
T Consensus 3 ~f~~GedVLar--wsDG~fYlGtI~~V~~~~~~clV~F~D~s~~ 44 (58)
T 4hcz_A 3 RLWEGQDVLAR--WTDGLLYLGTIKKVDSAREVCLVQFEDDSQF 44 (58)
T ss_dssp SCCTTCEEEEE--CTTSCEEEEEEEEEETTTTEEEEEETTSCEE
T ss_pred ccccCCEEEEE--ecCCCEEeEEEEEEecCCCEEEEEEcCCCeE
Confidence 35689999999 5699999999999999888999999875443
No 65
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.04 E-value=0.011 Score=46.37 Aligned_cols=48 Identities=19% Similarity=0.140 Sum_probs=39.2
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIE 234 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d 234 (497)
.+.+|.-|||+ ..||++|.++|..|+...+.|-|.|.+.-+.-++=.|
T Consensus 9 ~f~eGqdVLar--WsDGlfYlGtV~kV~~~~~~ClV~FeD~s~~wv~~kd 56 (68)
T 2e5p_A 9 RLWEGQDVLAR--WTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKD 56 (68)
T ss_dssp CCCTTCEEEEE--CTTSSEEEEEEEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred ccccCCEEEEE--ecCCcEEEeEEEEEecCCcEEEEEEccCCeeeeeeec
Confidence 56689999999 6799999999999998889999999876544444333
No 66
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.93 E-value=0.015 Score=45.14 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=39.6
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeec
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLG 232 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~ 232 (497)
..+++|.-|||+ ..||++|.++|..|+...+.|-|.|.+.-+.-++-
T Consensus 6 ~~f~eGqdVLar--WsDGlfYlgtV~kV~~~~~~ClV~FeD~s~~wv~~ 52 (63)
T 2e5q_A 6 SGLTEGQYVLCR--WTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLW 52 (63)
T ss_dssp CCCCTTCEEEEE--CTTSCEEEEEECCCCSTTSEEEEEETTSCEEEEEG
T ss_pred cceecCCEEEEE--ecCCCEEEEEEEEEecCCCEEEEEEccCceeEEEe
Confidence 356799999998 67999999999999988899999999866554543
No 67
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=95.87 E-value=0.0028 Score=50.31 Aligned_cols=26 Identities=27% Similarity=0.770 Sum_probs=20.1
Q ss_pred ccchhhhhhccccCCC-ccccCCCccc
Q 010937 145 MLMCKFFLQQRCRFGT-NCRLSHGIDV 170 (497)
Q Consensus 145 ~~pC~~fl~g~C~f~~-~Cr~sHg~~v 170 (497)
+.+|++|+.|.|..|+ .|+|+|....
T Consensus 6 ~~vC~~f~~G~C~rg~~~C~f~H~~~~ 32 (70)
T 3d2q_A 6 LEVCREYQRGNCNRGENDCRFAHPADS 32 (70)
T ss_dssp EEBCHHHHTTCCSSCTTTCSSBCCCTT
T ss_pred chhCHHHhcCCCCCCCCCCCCccCccc
Confidence 3468888888888887 5888887643
No 68
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=95.84 E-value=0.01 Score=64.48 Aligned_cols=50 Identities=18% Similarity=0.150 Sum_probs=43.5
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
.+.+|..|+|++ .||.||+|+|.+++. .+.|.|.|-++|+...|+...|.
T Consensus 411 ~~~~G~~c~a~~--~d~~wyRa~I~~v~~-~~~~~V~fvDyGn~e~v~~~~Lr 460 (570)
T 3bdl_A 411 APRRGEFCIAKF--VDGEWYRARVEKVES-PAKIHVFYIDYGNREVLPSTRLG 460 (570)
T ss_dssp CCCTTCEEEEEC--TTSCEEEEEEEEEEE-TTEEEEEETTTCCEEEECGGGEE
T ss_pred CCCcCCEEEEEE--CCCCEEEEEEEEEcC-CCeEEEEEEeCCCeEEEEHHHCc
Confidence 467999999995 389999999999987 46799999999999999877665
No 69
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.49 E-value=0.0054 Score=49.52 Aligned_cols=24 Identities=25% Similarity=0.563 Sum_probs=21.5
Q ss_pred ccchhhhhh-ccccCCCccccCCCcc
Q 010937 145 MLMCKFFLQ-QRCRFGTNCRLSHGID 169 (497)
Q Consensus 145 ~~pC~~fl~-g~C~f~~~Cr~sHg~~ 169 (497)
|.+|+||+. |.|. +.+|+|+|...
T Consensus 38 ~~~C~~f~~~G~C~-~~~C~f~H~~~ 62 (77)
T 2d9n_A 38 MPECYFYSKFGECS-NKECPFLHIDP 62 (77)
T ss_dssp SCBCHHHHHTCCCC-CSSCSSBCCCT
T ss_pred CCCCcccCCCCccC-CCCeeccCCCc
Confidence 567999999 9999 99999999753
No 70
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=95.48 E-value=0.0048 Score=51.52 Aligned_cols=33 Identities=15% Similarity=0.406 Sum_probs=25.4
Q ss_pred EecCCCccccchhhhhhccccCCC-ccccCCCcc
Q 010937 137 FLRPTSENMLMCKFFLQQRCRFGT-NCRLSHGID 169 (497)
Q Consensus 137 Fl~pt~~~~~pC~~fl~g~C~f~~-~Cr~sHg~~ 169 (497)
+-......+..|++|+.|.|.-++ .|+|+|...
T Consensus 9 ~~~~~~~~~~VCrdFlrG~C~r~d~~CrfsH~~~ 42 (89)
T 2rpp_A 9 VRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPK 42 (89)
T ss_dssp CCSCSSSEECBCHHHHHTCCCCCTTTSSSBCCCS
T ss_pred ccCCCcchhhhchHHhcCCCCCCCCCCCCcCCCc
Confidence 333334456679999999999997 999999755
No 71
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=95.46 E-value=0.0028 Score=50.61 Aligned_cols=25 Identities=32% Similarity=0.796 Sum_probs=0.0
Q ss_pred ccchhhhh-hccccCCCccccCCCcc
Q 010937 145 MLMCKFFL-QQRCRFGTNCRLSHGID 169 (497)
Q Consensus 145 ~~pC~~fl-~g~C~f~~~Cr~sHg~~ 169 (497)
..+|++|+ .|.|.||.+|+|.|+..
T Consensus 50 ~~~C~~f~~~G~C~~G~~C~f~H~~~ 75 (77)
T 1m9o_A 50 TELCHKFKLQGRCPYGSRCHFIHNPT 75 (77)
T ss_dssp --------------------------
T ss_pred CCcccchhhCcCCCCcCcCCCCCCCC
Confidence 46898655 69999999999999753
No 72
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=95.45 E-value=0.0057 Score=48.94 Aligned_cols=24 Identities=25% Similarity=0.538 Sum_probs=21.5
Q ss_pred cccchhhhhh-ccccCCCccccCCCc
Q 010937 144 NMLMCKFFLQ-QRCRFGTNCRLSHGI 168 (497)
Q Consensus 144 ~~~pC~~fl~-g~C~f~~~Cr~sHg~ 168 (497)
.|.+|+||+. |.|.+ .+|+|+|..
T Consensus 43 ~~~~C~~f~~~G~C~~-~~C~y~H~~ 67 (72)
T 2rhk_C 43 KMSECYFYSKFGECSN-KECPFLHID 67 (72)
T ss_dssp SCCBCHHHHHHSCCSB-TTCCSBCCC
T ss_pred cCCcccccCCCCCCCC-CCeeccCCC
Confidence 4678999999 99999 999999965
No 73
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=95.40 E-value=0.0056 Score=48.58 Aligned_cols=28 Identities=18% Similarity=0.524 Sum_probs=23.7
Q ss_pred CCccccchhhhhhccccCCCccccCCCcc
Q 010937 141 TSENMLMCKFFLQQRCRFGTNCRLSHGID 169 (497)
Q Consensus 141 t~~~~~pC~~fl~g~C~f~~~Cr~sHg~~ 169 (497)
....|..|.+||.|.|..+ +|+|.|+..
T Consensus 38 ~~~~~~vC~~flkG~C~r~-~C~y~H~~~ 65 (70)
T 3d2q_A 38 NDNTVTVCMDYIKGRCSRE-KCKYFHPPA 65 (70)
T ss_dssp TTTEEEBCHHHHTTCCCCT-TCCSBCCCH
T ss_pred cCCcceeccccCcCCCCCC-CcCeeCCHH
Confidence 3456788999999999999 999999753
No 74
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.37 E-value=0.0055 Score=51.98 Aligned_cols=28 Identities=18% Similarity=0.519 Sum_probs=21.8
Q ss_pred CCccccchhhhhhccccCCCccccCCCcc
Q 010937 141 TSENMLMCKFFLQQRCRFGTNCRLSHGID 169 (497)
Q Consensus 141 t~~~~~pC~~fl~g~C~f~~~Cr~sHg~~ 169 (497)
....+..|.+||.|.|..+ +|+|.|+..
T Consensus 52 ~~~~~~vC~~flkG~C~r~-~C~y~H~~~ 79 (98)
T 2e5s_A 52 SDNTVTVCMDYIKGRCMRE-KCKYFHPPA 79 (98)
T ss_dssp TTCEEEBCHHHHHTCCCCT-TCCSBCCCH
T ss_pred cCCccccchhhccCCCCCC-CcCccCChH
Confidence 3456677888888888888 888888654
No 75
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=95.25 E-value=0.17 Score=48.43 Aligned_cols=118 Identities=19% Similarity=0.241 Sum_probs=78.9
Q ss_pred ccCCCCCCeeEEEeCCC---ceeeeEEEeecc---CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccC---
Q 010937 101 DQRYSVGSKCRFRYNDG---RWYDGRIIGLEE---TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVP--- 171 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG---~~Y~A~I~~i~~---~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~--- 171 (497)
.....+|.++.|.|.++ .||.++|..+.. ..++-|+|..- ....++|+-.- =-|+-..+-. ..|+
T Consensus 66 ~~~l~vG~RVVA~~~~~~~~~fY~GiVaE~p~~~N~~RyLVFFDDG-~~~Yv~~~~V~-~Vc~~s~~vW----~di~~~~ 139 (213)
T 3dlm_A 66 ADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG-YASYVTQSELY-PICRPLKKTW----EDIEDIS 139 (213)
T ss_dssp GGGCCTTCEEEEEEECSSCEEEEEEEEEECCCTTTTSCEEEEETTS-CEEEECGGGEE-EBSSCCSSGG----GGCSCHH
T ss_pred ccEEeEEEEEEEEecCCCCcceeeeEEEECCccCCCceEEEEEeCC-CcceecCceEE-EEEEcccchh----hhcCcch
Confidence 45689999999999875 389999976643 23677888753 34444442211 1122221110 1111
Q ss_pred -----cccccccCCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCce
Q 010937 172 -----LSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSA 229 (497)
Q Consensus 172 -----~~~L~~~~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~ 229 (497)
-..|+.|+++..=.+++|+.+-+-. +|-|..|+|..+|. -.+.|.|+++....
T Consensus 140 ~r~FIk~YL~~yP~rpmv~~~~GQ~i~~E~---~g~w~~~~V~~vD~--SLv~v~f~~dkr~E 197 (213)
T 3dlm_A 140 CRDFIEEYVTAYPNRPMVLLKSGQLIKTEW---EGTWWKSRVEEVDG--SLVRILFLDDKRCE 197 (213)
T ss_dssp HHHHHHHHHHHTTCCCCCCCCTTCEEEEEE---TTEEEEEEEEEEET--TEEEEEETTTTEEE
T ss_pred hHHHHHHHHHhCCCCceEEcCCCCEEEEEe---cCcEEEEEEEEEcc--eeEEEEEcCCCeeE
Confidence 1346667877777889999998854 79999999999998 45899999876543
No 76
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.20 E-value=0.0042 Score=52.72 Aligned_cols=28 Identities=29% Similarity=0.738 Sum_probs=23.6
Q ss_pred cccchhhhhhccccCCC-ccccCCCcccC
Q 010937 144 NMLMCKFFLQQRCRFGT-NCRLSHGIDVP 171 (497)
Q Consensus 144 ~~~pC~~fl~g~C~f~~-~Cr~sHg~~v~ 171 (497)
-+..|++||.|.|..|+ +|+|+|.....
T Consensus 19 k~~VCr~FlrG~C~rgd~~C~FsH~~~~~ 47 (98)
T 2e5s_A 19 KLEVCREFQRGNCARGETDCRFAHPADST 47 (98)
T ss_dssp EEEBCSHHHHTCCSSHHHHCSSBCCSSCC
T ss_pred hhhhhHHHhcCcCCCCCCCCCCcCCchhc
Confidence 34569999999999998 89999987543
No 77
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=95.05 E-value=0.023 Score=45.85 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=36.5
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCC
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGS 227 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~ 227 (497)
..+.+|.-|||+ ..||++|.++|..|+...+.|-|+|.+.-+
T Consensus 25 ~~f~eGeDVLar--wsDGlfYLGTI~kV~~~~e~ClV~F~D~S~ 66 (79)
T 2m0o_A 25 PRLWEGQDVLAR--WTDGLLYLGTIKKVDSAREVCLVQFEDDSQ 66 (79)
T ss_dssp CCCCTTCEEEBC--CTTSCCCEEEEEEEETTTTEEEEEETTSCE
T ss_pred ceeccCCEEEEE--ecCCCEEeEEEEEeccCCCEEEEEEcCCCe
Confidence 466789999999 569999999999999888999999987543
No 78
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=94.80 E-value=0.0095 Score=49.03 Aligned_cols=25 Identities=20% Similarity=0.606 Sum_probs=21.9
Q ss_pred ccchhhhhhccccCCC-ccccCCCcc
Q 010937 145 MLMCKFFLQQRCRFGT-NCRLSHGID 169 (497)
Q Consensus 145 ~~pC~~fl~g~C~f~~-~Cr~sHg~~ 169 (497)
+..|++||.|.|.-++ .|+|+|...
T Consensus 9 ~~VCr~FlrG~C~r~d~~C~f~H~~~ 34 (83)
T 3d2n_A 9 LEVCREFQRGTCSRPDTECKFAHPSK 34 (83)
T ss_dssp EEBCTTGGGTCCCSCTTTCSSBCCCT
T ss_pred chhcHHHhcCCCCCCCCCCCCcCCCc
Confidence 4569999999999995 999999854
No 79
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=94.74 E-value=0.24 Score=48.34 Aligned_cols=123 Identities=13% Similarity=0.083 Sum_probs=80.4
Q ss_pred ccCCCCCCeeEEEeCC--CceeeeEEEeeccCCceEEEEecCCCccccchhh-----hhhccccCC---------Cccc-
Q 010937 101 DQRYSVGSKCRFRYND--GRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKF-----FLQQRCRFG---------TNCR- 163 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~d--G~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~-----fl~g~C~f~---------~~Cr- 163 (497)
...|.+|||..|.-.. +.++.|+|+.+.|. .++|-|.+.-...-..|.+ |--|+|.-. ....
T Consensus 60 ~~~f~vGmKLEa~D~~~~~~~~vATV~~v~g~-~l~l~~dG~d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~~~~ 138 (243)
T 2biv_A 60 VNDFKVGMKLEARDPRNATSVCIATVIGITGA-RLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQMNT 138 (243)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEEEEEETT-EEEEEETTSCSSSCEEEETTCTTEECTTHHHHTTCCCCCCTTCSSCG
T ss_pred cccccCCCEEEEecCCCCCcEEEEEEEEEeCC-EEEEEECCCCCCCCEeecCCCCccccChhHHhcCCccCCCccccccc
Confidence 3569999999999762 46899999999774 7889888765443333311 112666521 1100
Q ss_pred c----------CCCcccCcccccccC-CCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 164 L----------SHGIDVPLSFLKKYV-PTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 164 ~----------sHg~~v~~~~L~~~~-~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
| ......|.+..+.-. .+.-..+++|..+=|....+..+++.|+|.+|.. +.+.|.|++..
T Consensus 139 f~W~~yL~~tl~ga~~aP~~lF~~~~~~~~~~~F~~GmKLEavD~~~p~~icvATV~~v~g--~rl~v~fDgw~ 210 (243)
T 2biv_A 139 SSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKG--DEVHITFDGWS 210 (243)
T ss_dssp GGHHHHHHHHHTTCCBCCGGGSCCCCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEET--TEEEEEETTSC
T ss_pred chHHHHHHHhccCCccCCHHHhccCCCCCccccccCCCEEEEEccCCCCeEEEEEEEEecC--CEEEEEECCCC
Confidence 1 122333443333322 2234578999999998665678999999999997 67899998643
No 80
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=94.43 E-value=0.055 Score=47.38 Aligned_cols=46 Identities=24% Similarity=0.250 Sum_probs=38.0
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeec
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLG 232 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~ 232 (497)
..|.+|..|+|| |.+|.+|.|+|+.+... -+|.|.|+++.-+..+.
T Consensus 4 ~~v~vGq~V~ak--h~ngryy~~~V~~~~~~-~~y~V~F~DgS~s~dl~ 49 (118)
T 2qqr_A 4 QSITAGQKVISK--HKNGRFYQCEVVRLTTE-TFYEVNFDDGSFSDNLY 49 (118)
T ss_dssp SCCCTTCEEEEE--CTTSSEEEEEEEEEEEE-EEEEEEETTSCEEEEEC
T ss_pred ceeccCCEEEEE--CCCCCEEeEEEEEEeeE-EEEEEEcCCCCccCCCC
Confidence 467899999999 77999999999999875 68999999765554443
No 81
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=94.19 E-value=0.11 Score=40.82 Aligned_cols=40 Identities=23% Similarity=0.405 Sum_probs=33.9
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeec-cCCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLE-ETDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~-~~~~vrV~Fl~p 140 (497)
...|.+|+|+.|....+.||.|+|+.|+ .+..+.|-|.+.
T Consensus 10 ~~~F~vGmkLEa~d~~~p~~~AtV~~v~~~~~~~~VhfdGw 50 (69)
T 3sd4_A 10 GISFEVGAQLEARDRLKNWYPAHIEDIDYEEGKVLIHFKRW 50 (69)
T ss_dssp TCCCSTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred CCCcCCCCEEEEEECCCCccccEEEEEeccCCEEEEEeCCC
Confidence 4579999999999877778999999984 556788888875
No 82
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=94.09 E-value=0.072 Score=43.05 Aligned_cols=61 Identities=18% Similarity=0.240 Sum_probs=43.2
Q ss_pred cCCCCCCeeEEEeCC---CceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccccccc
Q 010937 102 QRYSVGSKCRFRYND---GRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKY 178 (497)
Q Consensus 102 ~~~~vG~kC~A~~~d---G~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~ 178 (497)
..+.+|++|.+.|.+ |.||+|.|+.+.......-+|++. .|-|-|+- .=|+.+.|..+
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY-----------------~gwnkr~D--EWV~~~ri~~~ 64 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHY-----------------YGWNVRYD--EWVKADRIIWP 64 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEE-----------------TTSCCSSC--EEEEGGGEECS
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEe-----------------CCcCCCce--EecChhhcccc
Confidence 468999999999975 579999999987644455677774 13344433 66777777766
Q ss_pred CCC
Q 010937 179 VPT 181 (497)
Q Consensus 179 ~~p 181 (497)
.+.
T Consensus 65 ~~~ 67 (76)
T 2lcc_A 65 LDK 67 (76)
T ss_dssp SCS
T ss_pred ccc
Confidence 544
No 83
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=93.85 E-value=0.02 Score=47.04 Aligned_cols=25 Identities=28% Similarity=0.513 Sum_probs=22.2
Q ss_pred cccchhhhhhccccCCCccccCCCcc
Q 010937 144 NMLMCKFFLQQRCRFGTNCRLSHGID 169 (497)
Q Consensus 144 ~~~pC~~fl~g~C~f~~~Cr~sHg~~ 169 (497)
.+..|.+|+.|.|..+ +|+|.|+..
T Consensus 42 ~~~vC~dflkG~C~r~-~C~y~H~~~ 66 (83)
T 3d2n_A 42 RVIACFDSLKGRCSRE-NCKYLHPPP 66 (83)
T ss_dssp EEECCHHHHTTCCCCS-SCSSCCCCH
T ss_pred ceeehhHhhhccccCC-CcceeCChH
Confidence 4677999999999999 999999764
No 84
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=93.78 E-value=0.083 Score=45.11 Aligned_cols=61 Identities=21% Similarity=0.221 Sum_probs=44.2
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVP 180 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~ 180 (497)
...|.+|++|.+.+ +|.||.|.|+.|.......-||+|+ .|-|-|+. .=|+.+.|..|.+
T Consensus 20 ~~~f~vGekVl~~~-~~~~YeAkIl~v~~~~~~~~Y~VHY-----------------~GwNkR~D--EWV~~~Rl~k~t~ 79 (102)
T 2f5k_A 20 KPKFQEGERVLCFH-GPLLYEAKCVKVAIKDKQVKYFIHY-----------------SGWNKNWD--EWVPESRVLKYVD 79 (102)
T ss_dssp SCSCCTTCEEEEES-SSSEEEEEEEEEEEETTEEEEEEEE-----------------TTSCGGGC--EEEEGGGEEESSH
T ss_pred CcccCCCCEEEEEE-CCEEEEEEEEEEEEcCCCcEEEEEe-----------------CCcCCCce--eeccHhhcccCCH
Confidence 34699999999998 7899999999987544455677775 23444543 6677777777664
Q ss_pred C
Q 010937 181 T 181 (497)
Q Consensus 181 p 181 (497)
.
T Consensus 80 e 80 (102)
T 2f5k_A 80 T 80 (102)
T ss_dssp H
T ss_pred H
Confidence 4
No 85
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=93.44 E-value=0.55 Score=43.88 Aligned_cols=108 Identities=18% Similarity=0.157 Sum_probs=69.2
Q ss_pred ccCCCCCCeeEEEeC--C--CceeeeEEEeecc-CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccc
Q 010937 101 DQRYSVGSKCRFRYN--D--GRWYDGRIIGLEE-TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFL 175 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~--d--G~~Y~A~I~~i~~-~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L 175 (497)
...+.+|+.|-|+-. + +.|--|.|+++.+ +.++.|.=..|- |+=+| .|..+ .+++|-..
T Consensus 42 ~~~~~~G~~VAakvk~~~~~~~WILa~Vv~~~~~~~rYeV~D~d~e------------g~~~~--~~s~~--~IIPLP~~ 105 (180)
T 3mea_A 42 DYVARPGDKVAARVKAVDGDEQWILAEVVSYSHATNKYEVDDIDEE------------GKERH--TLSRR--RVIPLPQW 105 (180)
T ss_dssp TCCCCTTCEEEEEEECCC--EEEEEEEEEEEETTTTEEEEEECCTT------------CCEEE--EEEGG--GEEECCSB
T ss_pred CcccCCCCEEEEEcCCCCCCccEEEEEEEEEcCCCCEEEEecCCCC------------CceeE--EeCHH--HEEECCCc
Confidence 457899999999975 2 3699999999875 346777666542 21111 11122 33333332
Q ss_pred cccCCCC-cccccCCCeEEEeecCCCCceEeeEEeeeeCC-CceEEEEEeCC
Q 010937 176 KKYVPTS-WEQSLVGSTIWALSDDKVGIWRKAELGSWDDE-HRMGEVVFRDD 225 (497)
Q Consensus 176 ~~~~~pd-~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~-~~~~~V~f~~~ 225 (497)
+.-...+ ...+..|+.|||.|. ..-..|+|+|...... .+.|.|.|+++
T Consensus 106 ~a~p~t~~~~~f~~G~~VLAlYP-~TT~FY~A~V~~~p~~~~~~y~L~FEdd 156 (180)
T 3mea_A 106 KANPETDPEALFQKEQLVLALYP-QTTCFYRALIHAPPQRPQDDYSVLFEDT 156 (180)
T ss_dssp BCCTTTCGGGSCCTTCEEEEECT-TSSEEEEEEEEECCSSTTCCEEEEEBCT
T ss_pred CCCcccCccccCCCCCEEEEeCC-CCceeeEEEEecCCCCCCCcEEEEEcCC
Confidence 2211111 345789999999973 5788999999877543 25799999864
No 86
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=93.29 E-value=0.15 Score=42.72 Aligned_cols=39 Identities=5% Similarity=0.118 Sum_probs=31.7
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
...+.+|.+|.+.+ +|.||.|.|+.+.....-..||+|.
T Consensus 21 ~~~~~vG~kv~v~~-~~~~y~AkIl~ir~~~~~~~YyVHY 59 (92)
T 2ro0_A 21 VDDIIIKCQCWVQK-NDEERLAEILSINTRKAPPKFYVHY 59 (92)
T ss_dssp TTSCCTTCEEEEEE-TTEEEEEEEEEEECSSSSCEEEEEE
T ss_pred cccccCCCEEEEEE-CCEEEEEEEEEEEEcCCCcEEEEEe
Confidence 45689999999998 8899999999987544445777775
No 87
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.27 E-value=0.079 Score=43.98 Aligned_cols=40 Identities=13% Similarity=0.272 Sum_probs=31.4
Q ss_pred ccCCCCCCeeEEEe----CCCceeeeEEEeeccCCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRY----NDGRWYDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~----~dG~~Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
...+.+|.+|.+.| .+|.||.|.|+.+.....-..+|+|.
T Consensus 7 ~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY 50 (87)
T 2eko_A 7 GGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHY 50 (87)
T ss_dssp SCSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEE
T ss_pred cccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEe
Confidence 45689999999999 37789999999987644445677774
No 88
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=93.18 E-value=0.65 Score=45.89 Aligned_cols=123 Identities=11% Similarity=0.080 Sum_probs=80.0
Q ss_pred ccCCCCCCeeEEEeCC--CceeeeEEEeeccCCceEEEEecCCCccccchhh-----hhhccccCCCcc----------c
Q 010937 101 DQRYSVGSKCRFRYND--GRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKF-----FLQQRCRFGTNC----------R 163 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~d--G~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~-----fl~g~C~f~~~C----------r 163 (497)
...|.+|||..|.-.. ..++.|+|+.|-+. .++|-|.+.-...-..|.. |--|+|.-...- .
T Consensus 32 ~~~F~vGMKLEavDp~~~~~icvATV~~v~g~-~l~l~~DG~d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~~~~ 110 (265)
T 2r58_A 32 NNDFKIGMKLEALDPRNVTSTCIATVVGVLGS-RLRLRLDGSDSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGFCMNA 110 (265)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEEEEEETT-EEEEEETTSCSSCCEEEETTCTTEECTTHHHHTTCCCCCCTTCSSCG
T ss_pred ccccccCCEeEEecCCCCCCEEEEEEEEEeCC-EEEEEeCCCCCcCCEeEeCCCCCeeccccHHhcCCcccCccccccCc
Confidence 3569999999999752 24789999999876 7888887764443333311 122666521100 0
Q ss_pred c----------CCCcccCcccccccC-CCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 164 L----------SHGIDVPLSFLKKYV-PTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 164 ~----------sHg~~v~~~~L~~~~-~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
| +.....|.+..+... .+....+++|...=|....+..+++.|+|.+|.. +.+.|.|++..
T Consensus 111 f~W~~yL~ktl~ga~~aP~~lF~~~~~~~~~~~F~vGMKLEavD~~np~~icvATV~~v~g--~rl~v~fDGw~ 182 (265)
T 2r58_A 111 SSWPGYLCKILNNAMVAPEEIFQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKD--DQIHVTFDGWR 182 (265)
T ss_dssp GGHHHHHHHHHTTCCBCCGGGSCCCCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEET--TEEEEEETTSC
T ss_pred CCHHHHHHHhhcCCccCCHHHhcccCCCCcccccccCcEEEeccCCCCCCEEEEEEEEecC--CEEEEEeCCCC
Confidence 0 122233333333222 2234568999999998766788999999999996 77999998643
No 89
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=92.94 E-value=0.19 Score=39.76 Aligned_cols=41 Identities=10% Similarity=0.093 Sum_probs=33.0
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSS 228 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~ 228 (497)
....+|.-|||+ ..||++|-++| |+...+.|-|.|++.-+.
T Consensus 14 ~~~~~geDVL~r--w~DG~fYLGtI--Vd~~~~~ClV~FeD~S~~ 54 (69)
T 2xk0_A 14 VTYALQEDVFIK--CNDGRFYLGTI--IDQTSDQYLIRFDDQSEQ 54 (69)
T ss_dssp CCCCTTCEEEEE--CTTSCEEEEEE--EEECSSCEEEEETTCCEE
T ss_pred cccccCCeEEEE--ecCCCEEEEEE--EecCCceEEEEecCCcce
Confidence 456799999999 56999999999 555558899999875443
No 90
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=92.83 E-value=0.62 Score=49.26 Aligned_cols=106 Identities=13% Similarity=0.114 Sum_probs=70.7
Q ss_pred ccCCCCCCeeEEEeC----CCceeeeEEEeeccCC-ceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccc
Q 010937 101 DQRYSVGSKCRFRYN----DGRWYDGRIIGLEETD-SAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFL 175 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~----dG~~Y~A~I~~i~~~~-~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L 175 (497)
.....+|+.|-|+-. .+.|--|.|+++.+.+ ++.|.=.-|-.. |.-.|-+.++-+.+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~y~v~d~~~~~~------------------~~~~~~~~~~~~~~ 446 (522)
T 3mp6_A 385 NAPILVGSEVAYKPRRGSADGEWIQCEVLKVVADGTRFEVRDPEPDEL------------------GNSGKVYKCNRKEL 446 (522)
T ss_dssp CCCBCTTCEEEECCC-----CCEEEEEEEEEETTTTEEEEEECSCBTT------------------BTTCEEEEECGGGE
T ss_pred ccccCCCCEEEEecCCCCCCCCEEEEEEEEEeCCCCEEEEeCCCCCCC------------------CCCCeeEEccHHHE
Confidence 456789999999732 4679999999987644 677877765221 11111233444444
Q ss_pred cccCCCCc-ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 176 KKYVPTSW-EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 176 ~~~~~pd~-~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
-++++++. ..+..|+.|||.+. ..-..|+|+|...... +.|.|.|+++.
T Consensus 447 ~~~p~~~~~~~~~~~~~v~a~~p-~tt~fy~a~v~~~~~~-~~~~~~f~~~~ 496 (522)
T 3mp6_A 447 LLIPPGFPTKNYPPGTKVLARYP-ETTTFYPAIVIGTKRD-GTCRLRFDGEE 496 (522)
T ss_dssp EEECSSCCCCCCCTTCEEEEECT-TCSEEEEEEEEEECTT-SCEEEEETTC-
T ss_pred EECCCCCcccCCCCCCEEEEECC-CCcceEeEEEecCCCC-CeEEEEecCCC
Confidence 44443332 34689999999973 5788999999987554 56999998753
No 91
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=92.63 E-value=0.25 Score=43.98 Aligned_cols=40 Identities=13% Similarity=0.275 Sum_probs=32.1
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeecc--CCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEE--TDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~--~~~vrV~Fl~p 140 (497)
...|.+|.+|.+.|.+|.||.|.|+.+.. ...-.-||+|+
T Consensus 10 ~~~~~vGe~v~~~~~d~~~y~AkIl~i~~~~~~~~~~YyVHY 51 (133)
T 1wgs_A 10 EVTVEIGETYLCRRPDSTWHSAEVIQSRVNDQEGREEFYVHY 51 (133)
T ss_dssp CCCCCTTSEEEEEETTTEEEEEEEEEEEEETTTTEEEEEEEC
T ss_pred ccccCCCCEEEEEeCCCCEEEEEEEEEEeccCCCceEEEEec
Confidence 34699999999999889999999998763 22345788885
No 92
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=92.58 E-value=0.25 Score=41.52 Aligned_cols=39 Identities=5% Similarity=0.118 Sum_probs=32.1
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
...+.+|++|.+.+ +|.||.|.|+.+.....-.-||+|.
T Consensus 23 ~~~~~vG~kv~v~~-~~~~yeAeIl~ir~~~g~~~YYVHY 61 (94)
T 2rnz_A 23 VDDIIIKCQCWVQK-NDEERLAEILSINTRKAPPKFYVHY 61 (94)
T ss_dssp GGGCCTTEEEEEEC-SSCEEEEEEEEEECSSSSCEEEEEC
T ss_pred cccccCCCEEEEEE-CCEEEEEEEEEEEEcCCCcEEEEEe
Confidence 45689999999997 8899999999997644456788885
No 93
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=92.56 E-value=0.16 Score=44.46 Aligned_cols=49 Identities=18% Similarity=0.188 Sum_probs=35.7
Q ss_pred ccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccc
Q 010937 186 SLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAM 236 (497)
Q Consensus 186 l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~ 236 (497)
-.+|-+|+|+-+ +++-||+++|+.... .+.|+|.|+++-+....+.+.|
T Consensus 5 ~~~G~rV~AkWs-dn~~yYpG~V~~~~~-~~ky~V~FdDg~~~~v~~k~ii 53 (123)
T 2g3r_A 5 SFVGLRVVAKWS-SNGYFYSGKITRDVG-AGKYKLLFDDGYECDVLGKDIL 53 (123)
T ss_dssp CCTTCEEEEECT-TTCCEEEEEEEEEEE-TTEEEEEETTSCEEEEEGGGEE
T ss_pred cccceEEEEEec-cCCcCcccEEEEecc-CCeEEEEEcCCCeeEeecceEE
Confidence 357999999964 566899999988554 4779999997655544443333
No 94
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=92.35 E-value=0.049 Score=45.35 Aligned_cols=25 Identities=28% Similarity=0.522 Sum_probs=22.2
Q ss_pred cccchhhhhhccccCCCccccCCCcc
Q 010937 144 NMLMCKFFLQQRCRFGTNCRLSHGID 169 (497)
Q Consensus 144 ~~~pC~~fl~g~C~f~~~Cr~sHg~~ 169 (497)
.|..|.+|+.|.|..+ +|+|.|+..
T Consensus 50 ~~~vC~dflkG~C~r~-~Cky~H~~~ 74 (89)
T 2rpp_A 50 RVIACFDSLKGRCSRE-NCKYLHPPT 74 (89)
T ss_dssp BEEBCHHHHHTCCCCT-TCCSBCCCH
T ss_pred ceeeehhhhhCcCCCC-CcceecCHH
Confidence 4678999999999998 999999765
No 95
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=92.01 E-value=0.076 Score=46.78 Aligned_cols=45 Identities=18% Similarity=0.175 Sum_probs=37.3
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceee
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKL 231 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~ 231 (497)
..|.+|..|+|| |.+|.+|.|+|+.+.. .-+|.|.|+++--+..+
T Consensus 5 ~~v~vGq~V~ak--~~ngryy~~~V~~~~~-~~~y~V~F~DgS~s~dl 49 (123)
T 2xdp_A 5 KVISVGQTVITK--HRNTRYYSCRVMAVTS-QTFYEVMFDDGSFSRDT 49 (123)
T ss_dssp CCCCTTCCCCCC--CCCCCCCCCEEEEEEE-EEEEEEEETTSCEEEEE
T ss_pred cccccCCEEEEE--CCCCcEEeEEEEEEee-EEEEEEEcCCCCccCCC
Confidence 467899999999 7799999999999997 46899999976555444
No 96
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=91.64 E-value=1.6 Score=44.40 Aligned_cols=120 Identities=14% Similarity=0.062 Sum_probs=77.7
Q ss_pred ccCCCCCCeeEEEeC--CCceeeeEEEeeccCCceEEEEecCCCccccchhh-----hhhccccCCC-----------cc
Q 010937 101 DQRYSVGSKCRFRYN--DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKF-----FLQQRCRFGT-----------NC 162 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~--dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~-----fl~g~C~f~~-----------~C 162 (497)
...|.+|||..|.-. -+.++.|+|+.+.+. .++|-|.+.-...-.-|.. |--|+|.-.. .-
T Consensus 146 ~~~F~vGmKLEavD~~np~~icvATV~~v~g~-r~~v~~Dg~~~~~D~w~~~~S~~I~PVGwc~~~g~~L~pP~gy~~~~ 224 (331)
T 1oz2_A 146 PLGFQVGMKLEAVDRMNPSLVCVASVTDVVDS-RFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQKQGKPLTPPQDYPDPD 224 (331)
T ss_dssp CTTCCTTCEEEEECTTSTTCEEEEEEEEEETT-EEEEEETTSCGGGCEEECTTCTTEECTTHHHHHTCCEECSTTCSSGG
T ss_pred ccccccccEEEeccCCCCCcEEEEEEEEeeCC-EEEEEeCCCCCccCEEEecCCCCccCCchHHhcCCCCCCCCCCCcCC
Confidence 457999999999975 346899999999876 6899998865433333311 1125554210 00
Q ss_pred ccC--------CCcccCcccccccCCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 163 RLS--------HGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 163 r~s--------Hg~~v~~~~L~~~~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
.|+ ....+|....+ ...-...++|..+=|....+..+.+.|+|++|.. +.+.|.|++..
T Consensus 225 ~f~W~~yL~~~ga~~aP~~~F~---~~~~~~F~~gmKLEavD~~~p~~ic~AtV~~v~~--~~l~v~fDgw~ 291 (331)
T 1oz2_A 225 NFCWEKYLEETGASAVPTWAFK---VRPPHSFLVNMKLEAVDRRNPALIRVASVEDVED--HRIKIHFDGWS 291 (331)
T ss_dssp GCCHHHHHHHHTCCBCCGGGCC---CCCCCCCCTTCEEEEECSSSTTCEEEEEEEEECS--SEEEEEETTBC
T ss_pred cccHHHHHHhcCCCcCCHHHcc---cccccccccCceeEeecccCCCcEEeeEEEEEcC--CEEEEEeCCCC
Confidence 000 11222222222 1122567899999999766788999999999986 67999998654
No 97
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=90.00 E-value=0.096 Score=50.56 Aligned_cols=26 Identities=31% Similarity=0.819 Sum_probs=21.7
Q ss_pred CccccchhhhhhccccCCCccccCCCc
Q 010937 142 SENMLMCKFFLQQRCRFGTNCRLSHGI 168 (497)
Q Consensus 142 ~~~~~pC~~fl~g~C~f~~~Cr~sHg~ 168 (497)
....-.|.+||+|.|+| .+|..||-.
T Consensus 172 C~kLHIC~~Fl~G~C~f-~~CkRsH~~ 197 (229)
T 3u9g_A 172 CERLHICEHFTRGNCSY-LNCLRSHNL 197 (229)
T ss_dssp CCSBCSCHHHHTTCCCC-SSCSSCCCT
T ss_pred CcceeccchhhcCCcCC-CCccCccCc
Confidence 34455699999999999 799999964
No 98
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=89.99 E-value=0.71 Score=38.18 Aligned_cols=41 Identities=22% Similarity=0.378 Sum_probs=34.1
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeec-cCCceEEEEecCC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLE-ETDSAKVSFLRPT 141 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~-~~~~vrV~Fl~pt 141 (497)
...|.+|+|+.|....|.||.|.|+-++ ....+.|-|.+.-
T Consensus 17 ~~~F~vGmkLEA~D~~~~~~~a~i~~v~~~~~~v~VHfdGW~ 58 (88)
T 2eqm_A 17 GITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWS 58 (88)
T ss_dssp SCCCCSSCEEEEECTTSCEEEEEEEEEETTTTEEEEEESSST
T ss_pred cCcCCCCCEEEEEcCCCCeeEEEEEEEeccCCEEEEEECCCC
Confidence 4679999999999888899999998776 3457888888763
No 99
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=88.87 E-value=0.36 Score=38.88 Aligned_cols=57 Identities=12% Similarity=0.024 Sum_probs=40.0
Q ss_pred CcccccCCCeEEEeecC-CCCceEeeEEeeeeCCC--ceEEEEEeCCCCce--eeccccccc
Q 010937 182 SWEQSLVGSTIWALSDD-KVGIWRKAELGSWDDEH--RMGEVVFRDDGSSA--KLGIEAMTL 238 (497)
Q Consensus 182 d~~~l~~Gs~~la~~~~-~dglW~~a~i~~~d~~~--~~~~V~f~~~g~~~--~~~~d~~~~ 238 (497)
++..+.+|..|++..+. .++.||.|.|.+++... ..|-|-|.+..+.- =|+.+.|.+
T Consensus 2 e~~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~ 63 (76)
T 2lcc_A 2 DMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIW 63 (76)
T ss_dssp CCCCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEEC
T ss_pred cccccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhccc
Confidence 35678899999998531 13699999999887543 35789999866554 255555543
No 100
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=88.83 E-value=0.49 Score=43.00 Aligned_cols=44 Identities=16% Similarity=0.151 Sum_probs=34.4
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceee
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKL 231 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~ 231 (497)
+..+|-.|+|+=+ +++-||+|+|..... .+.|.|+|+++- +..|
T Consensus 8 ~~~iG~rVfArWs-d~~yyYpG~V~~~~~-~~~Y~V~FdDG~-~k~v 51 (156)
T 1ssf_A 8 NSFVGLRVVAKWS-SNGYFYSGKITRDVG-AGKYKLLFDDGY-ECDV 51 (156)
T ss_dssp CCSTTCEEEECSS-CSSEEEEEEEEECCT-TTEEEEECTTSC-EEEE
T ss_pred cchhccEEEEEcC-CCCcccccEEEEecc-CCEEEEEEcCCC-eeEe
Confidence 4578999999974 688999999999754 467999998754 4444
No 101
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=88.53 E-value=0.48 Score=42.14 Aligned_cols=52 Identities=13% Similarity=0.045 Sum_probs=38.4
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeC----CCceEEEEEeCCCCce--eeccccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDD----EHRMGEVVFRDDGSSA--KLGIEAMTL 238 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~----~~~~~~V~f~~~g~~~--~~~~d~~~~ 238 (497)
.+.+|..|++. +.++.||.|.|.++.. +...|-|.|.+..+.- -|+.+.|.+
T Consensus 12 ~~~vGe~v~~~--~~d~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri~~ 69 (133)
T 1wgs_A 12 TVEIGETYLCR--RPDSTWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLAL 69 (133)
T ss_dssp CCCTTSEEEEE--ETTTEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTSCC
T ss_pred ccCCCCEEEEE--eCCCCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhccc
Confidence 56799999998 4489999999999773 3356889999866554 255555544
No 102
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=88.24 E-value=1.8 Score=35.65 Aligned_cols=45 Identities=20% Similarity=0.143 Sum_probs=37.1
Q ss_pred CcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCc
Q 010937 182 SWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSS 228 (497)
Q Consensus 182 d~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~ 228 (497)
....+++|..+-|. +..+.||.|.|+.++.....|.|.|+...+.
T Consensus 16 ~~~~F~vGmkLEA~--D~~~~~~~a~i~~v~~~~~~v~VHfdGW~~~ 60 (88)
T 2eqm_A 16 PGITFEIGARLEAL--DYLQKWYPSRIEKIDYEEGKMLVHFERWSHR 60 (88)
T ss_dssp SSCCCCSSCEEEEE--CTTSCEEEEEEEEEETTTTEEEEEESSSTTT
T ss_pred CcCcCCCCCEEEEE--cCCCCeeEEEEEEEeccCCEEEEEECCCCCc
Confidence 34677899999998 4468899999999997778899999986544
No 103
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=87.47 E-value=0.97 Score=39.01 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=41.5
Q ss_pred ccCCCCCCeeEEEeCC---Cc-eeeeEEEeecc---C--CceEEEEecCCCccccchhhhhhccccCCCccccCCCcccC
Q 010937 101 DQRYSVGSKCRFRYND---GR-WYDGRIIGLEE---T--DSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVP 171 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~d---G~-~Y~A~I~~i~~---~--~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~ 171 (497)
...|.+|++|++.|.| |. +|.|.|+.|.. . ..+.-||+++ .|=|.++. .-|+
T Consensus 17 k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY-----------------~GWn~~WD--EWV~ 77 (110)
T 3oa6_A 17 KFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHF-----------------NGWNRSWD--RWAA 77 (110)
T ss_dssp -CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEE-----------------TTSCGGGC--EEEE
T ss_pred CcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEE-----------------CCcCcchh--hccC
Confidence 5679999999999864 64 89999998742 1 2344577775 24455543 5677
Q ss_pred cccccccCC
Q 010937 172 LSFLKKYVP 180 (497)
Q Consensus 172 ~~~L~~~~~ 180 (497)
.+.|..|.+
T Consensus 78 ~drllk~ne 86 (110)
T 3oa6_A 78 EDHVLRDTD 86 (110)
T ss_dssp GGGEEECCH
T ss_pred hhhhhcCCH
Confidence 777776653
No 104
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=87.33 E-value=1.4 Score=36.71 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=38.3
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCC--CceEEEEEeCCCCce--eeccccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDE--HRMGEVVFRDDGSSA--KLGIEAMTL 238 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~--~~~~~V~f~~~g~~~--~~~~d~~~~ 238 (497)
..+.+|+.|++.. ++.||.|.|.++... ...|-|.|.+..+.- =|+.+.|.+
T Consensus 22 ~~~~vG~kv~v~~---~~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl~l 77 (92)
T 2ro0_A 22 DDIIIKCQCWVQK---NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINL 77 (92)
T ss_dssp TSCCTTCEEEEEE---TTEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGEET
T ss_pred ccccCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHccc
Confidence 4678999999973 799999999988742 356789999876654 255555544
No 105
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=86.99 E-value=0.12 Score=42.64 Aligned_cols=62 Identities=11% Similarity=0.119 Sum_probs=43.7
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVP 180 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~ 180 (497)
...|.+|++|.+.| .|.||.|.|+.+.......-+|+|+ .|-|-|+. .=|+.+.|..|.+
T Consensus 10 ~~~~~~Gekv~~~~-~~~~y~AkIl~i~~~~~~~~YyVHY-----------------~GwNkR~D--EWV~~~Rl~k~t~ 69 (85)
T 2lrq_A 10 NTLFVDGERVLCFH-GPLIYEAKVLKTKPDATPVEYYIHY-----------------AGWSKNWD--EWVPENRVLKYND 69 (85)
Confidence 45699999999999 5689999999986533334566664 13455543 7788888877765
Q ss_pred CC
Q 010937 181 TS 182 (497)
Q Consensus 181 pd 182 (497)
-.
T Consensus 70 en 71 (85)
T 2lrq_A 70 DN 71 (85)
Confidence 43
No 106
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=87.02 E-value=1.2 Score=37.89 Aligned_cols=61 Identities=13% Similarity=-0.002 Sum_probs=42.1
Q ss_pred ccCCCCCCeeEEEeCC----CceeeeEEEeecc-----CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccC
Q 010937 101 DQRYSVGSKCRFRYND----GRWYDGRIIGLEE-----TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVP 171 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~d----G~~Y~A~I~~i~~-----~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~ 171 (497)
...|.+|++|.+.|.| +.+|.|.|+.|.. .....-||++. .|-|-|+ -.-|+
T Consensus 17 ~~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY-----------------~GWn~rw--DEWV~ 77 (101)
T 3m9q_A 17 TPLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHF-----------------QGWRPSY--DRAVR 77 (101)
T ss_dssp CCCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEE-----------------TTSCGGG--CEEEC
T ss_pred CCcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEe-----------------CCCCcCc--eeecC
Confidence 3469999999999964 4699999998853 12455677774 2334333 36677
Q ss_pred cccccccCC
Q 010937 172 LSFLKKYVP 180 (497)
Q Consensus 172 ~~~L~~~~~ 180 (497)
.+.|..|.+
T Consensus 78 edRilk~~e 86 (101)
T 3m9q_A 78 ATVLLKDTE 86 (101)
T ss_dssp GGGEEECCH
T ss_pred HHHcccCCH
Confidence 777777654
No 107
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=86.70 E-value=1.7 Score=33.94 Aligned_cols=42 Identities=19% Similarity=0.139 Sum_probs=34.3
Q ss_pred cccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 183 WEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 183 ~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
-..+++|..+-|.. ..+.||.|+|..|+...+.+.|.|++..
T Consensus 10 ~~~F~vGmkLEa~d--~~~p~~~AtV~~v~~~~~~~~VhfdGw~ 51 (69)
T 3sd4_A 10 GISFEVGAQLEARD--RLKNWYPAHIEDIDYEEGKVLIHFKRWN 51 (69)
T ss_dssp TCCCSTTCEEEEEC--TTSCEEEEEEEEEETTTTEEEEEETTSC
T ss_pred CCCcCCCCEEEEEE--CCCCccccEEEEEeccCCEEEEEeCCCC
Confidence 45678999999984 4677999999999766688999998643
No 108
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=85.92 E-value=1.5 Score=40.99 Aligned_cols=40 Identities=15% Similarity=0.152 Sum_probs=32.9
Q ss_pred ccCCCCCCeeEEEeCCC-ceeeeEEEeecc--CCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRYNDG-RWYDGRIIGLEE--TDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG-~~Y~A~I~~i~~--~~~vrV~Fl~p 140 (497)
...|..|++|+|.|.+= +||.|.|++... .+.++|.|..-
T Consensus 114 ~~~f~~G~~VLAlYP~TT~FY~A~V~~~p~~~~~~y~L~FEdd 156 (180)
T 3mea_A 114 EALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDT 156 (180)
T ss_dssp GGSCCTTCEEEEECTTSSEEEEEEEEECCSSTTCCEEEEEBCT
T ss_pred cccCCCCCEEEEeCCCCceeeEEEEecCCCCCCCcEEEEEcCC
Confidence 45699999999999853 499999998743 36899999874
No 109
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=85.39 E-value=1.4 Score=36.80 Aligned_cols=57 Identities=18% Similarity=0.148 Sum_probs=38.8
Q ss_pred CCCCCeeEEEeCCCceeeeEEEeeccCC---ceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccC
Q 010937 104 YSVGSKCRFRYNDGRWYDGRIIGLEETD---SAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYV 179 (497)
Q Consensus 104 ~~vG~kC~A~~~dG~~Y~A~I~~i~~~~---~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~ 179 (497)
..+|.+|++.|.+|.||.|.|+.+.... .-.-||+|. .|-|-|+ -.=|+.+.|..+.
T Consensus 15 ~~~~e~vlc~~~dg~~yeAeIl~ir~~~~~~~~~~YYVHY-----------------~g~NkRl--DEWV~~~RL~~~~ 74 (92)
T 2bud_A 15 ENPDKIYFIRREDGTVHRGQVLQSRTTENAAAPDEYYVHY-----------------VGLNRRL--DGWVGRHRISDNA 74 (92)
T ss_dssp TCTTSCEEEECTTSCEEEEEEEEEECTTTCSSCCEEEEEC-----------------SSSCTTT--CEEEETTTEESCH
T ss_pred CCCCCEEEEEeCCCCEEEEEEEEEeeccCCCCCcEEEEEe-----------------CCccccc--ccccCHHHhchhc
Confidence 3558999999988999999999986422 234677775 2444443 3556666666544
No 110
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.37 E-value=0.95 Score=37.42 Aligned_cols=56 Identities=21% Similarity=0.197 Sum_probs=40.1
Q ss_pred ccccCCCeEEEeec--CCCCceEeeEEeeeeCC--CceEEEEEeCCCCce--eecccccccc
Q 010937 184 EQSLVGSTIWALSD--DKVGIWRKAELGSWDDE--HRMGEVVFRDDGSSA--KLGIEAMTLS 239 (497)
Q Consensus 184 ~~l~~Gs~~la~~~--~~dglW~~a~i~~~d~~--~~~~~V~f~~~g~~~--~~~~d~~~~~ 239 (497)
..+.+|+.|++... ..+++||.|.|.++... ...|-|.|.+..+.- =|+.+.|.++
T Consensus 8 ~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~~~ 69 (87)
T 2eko_A 8 GEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLDLK 69 (87)
T ss_dssp CSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBCGG
T ss_pred ccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHcccc
Confidence 45679999999731 14899999999998753 245789999876654 2565655553
No 111
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=83.85 E-value=0.28 Score=47.71 Aligned_cols=24 Identities=33% Similarity=0.780 Sum_probs=21.5
Q ss_pred chhhhhhccccCCCccccCCCccc
Q 010937 147 MCKFFLQQRCRFGTNCRLSHGIDV 170 (497)
Q Consensus 147 pC~~fl~g~C~f~~~Cr~sHg~~v 170 (497)
.|.||..|.|+.|.+|.|.|....
T Consensus 72 ~C~ffakG~C~~G~~C~y~H~lPt 95 (240)
T 3u1l_A 72 FCLFFAKGMCCLGPKCEYLHHIPD 95 (240)
T ss_dssp BCHHHHTTCCSCGGGCSSBBSCCC
T ss_pred EcCccccCCCCCCCCCCccCCCCC
Confidence 699999999999999999997543
No 112
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=83.68 E-value=1.7 Score=36.92 Aligned_cols=42 Identities=5% Similarity=-0.086 Sum_probs=33.1
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCC--CceEEEEEeCCCCc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDE--HRMGEVVFRDDGSS 228 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~--~~~~~V~f~~~g~~ 228 (497)
..+.+|..|++. + ++.||.|.|.+++.. ...|-|-|.+..+.
T Consensus 21 ~~f~vGekVl~~--~-~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR 64 (102)
T 2f5k_A 21 PKFQEGERVLCF--H-GPLLYEAKCVKVAIKDKQVKYFIHYSGWNKN 64 (102)
T ss_dssp CSCCTTCEEEEE--S-SSSEEEEEEEEEEEETTEEEEEEEETTSCGG
T ss_pred cccCCCCEEEEE--E-CCEEEEEEEEEEEEcCCCcEEEEEeCCcCCC
Confidence 367899999996 3 799999999988742 34688999886654
No 113
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=83.56 E-value=0.32 Score=46.92 Aligned_cols=24 Identities=33% Similarity=0.840 Sum_probs=18.6
Q ss_pred cccchhhhhhccccC----CCccccCCC
Q 010937 144 NMLMCKFFLQQRCRF----GTNCRLSHG 167 (497)
Q Consensus 144 ~~~pC~~fl~g~C~f----~~~Cr~sHg 167 (497)
..--|+||+.|+|+| +..|+|||-
T Consensus 88 ~LHLCK~~l~G~C~~~~~~~~~Ck~SHd 115 (229)
T 3u9g_A 88 SLHLCKLNLLGRCHYAQSQRNLCKYSHD 115 (229)
T ss_dssp SBCCCHHHHTTCCGGGTCCSSCCSSCSC
T ss_pred ceeechhhhcCcCCcccCCCCCcccccc
Confidence 344599999999943 377999994
No 114
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=83.00 E-value=1.9 Score=38.17 Aligned_cols=57 Identities=12% Similarity=0.192 Sum_probs=41.7
Q ss_pred ccCCCCCCeeEEEeC-CC----ceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccc
Q 010937 101 DQRYSVGSKCRFRYN-DG----RWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFL 175 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-dG----~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L 175 (497)
...+.+|++|.+-+. +. .||.|+|..+.|. -+.|.|... + -+|...|+++.|
T Consensus 58 ~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~-f~~V~y~~~------------------~----~~~~EiV~~~rl 114 (128)
T 3h8z_A 58 NKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGD-FYVIEYAAC------------------D----ATYNEIVTLERL 114 (128)
T ss_dssp --CCCTTCEEEEEECC---CCCEEEEEEEEEEETT-EEEEEETTC--------------------------CEEECGGGE
T ss_pred ccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCC-EEEEEEcCC------------------C----CCcceEEehhhe
Confidence 357999999999886 33 5999999999875 578888772 2 357789999999
Q ss_pred cccCC
Q 010937 176 KKYVP 180 (497)
Q Consensus 176 ~~~~~ 180 (497)
|+..+
T Consensus 115 R~~n~ 119 (128)
T 3h8z_A 115 RPVNP 119 (128)
T ss_dssp EECCC
T ss_pred EeCCC
Confidence 98753
No 115
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=82.47 E-value=1.6 Score=37.70 Aligned_cols=62 Identities=13% Similarity=0.065 Sum_probs=41.1
Q ss_pred ccCCCCCCeeEEEeCC----CceeeeEEEeeccC----C-ceEEEEecCCCccccchhhhhhccccCCCccccCCCcccC
Q 010937 101 DQRYSVGSKCRFRYND----GRWYDGRIIGLEET----D-SAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVP 171 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~d----G~~Y~A~I~~i~~~----~-~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~ 171 (497)
...|.+|++|.+.|.+ +.||.|.|+.|... + ...-||+++ .|-|-|+. .-|+
T Consensus 17 ~~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY-----------------~GWn~~wD--EWV~ 77 (110)
T 3m9p_A 17 KFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHF-----------------NGWNRSWD--RWAA 77 (110)
T ss_dssp -CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEE-----------------TTSCGGGC--EEEE
T ss_pred CCcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCcccccceEEEEEE-----------------CCCCcchh--hccC
Confidence 4579999999998865 58999999988531 1 245667764 23333333 6677
Q ss_pred cccccccCCC
Q 010937 172 LSFLKKYVPT 181 (497)
Q Consensus 172 ~~~L~~~~~p 181 (497)
.+.|..|.+.
T Consensus 78 e~rllk~~ee 87 (110)
T 3m9p_A 78 EDHVLRDTDE 87 (110)
T ss_dssp GGGEEECCHH
T ss_pred HhhhhcCCHH
Confidence 7777766543
No 116
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=82.05 E-value=1.8 Score=38.08 Aligned_cols=66 Identities=15% Similarity=0.236 Sum_probs=49.7
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeecc-CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcccccccCC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEE-TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKYVP 180 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~-~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~~~ 180 (497)
..+-.||-|-++|-+--|.||+|.+|.- ..+++|+|+. ++-|.=.-|..|++..|++|.=
T Consensus 3 ~~~e~GmlVW~K~q~yPfWPAVVKSV~r~ekkA~VL~Ie-------------------~~m~~ekrGi~V~LrrLK~fDC 63 (134)
T 3pmi_A 3 RSFEVGMLVWHKHKKYPFWPAVVKSVRQRDKKASVLYIE-------------------GHMNPKMKGFTVSLKSLKHFDC 63 (134)
T ss_dssp -CCCTTCEEEECCTTSCCEEEEEEEEEGGGTEEEEEECC-------------------SSCCTTSCCEEEEGGGCEETTS
T ss_pred cccccceEEEEEeccCCCcchheeeeeeccceEEEEEEe-------------------CCCCcccCceEeEcccCCCCCh
Confidence 4577899999998654578999999964 5589999997 3333334599999999999885
Q ss_pred CCcccc
Q 010937 181 TSWEQS 186 (497)
Q Consensus 181 pd~~~l 186 (497)
-..+.|
T Consensus 64 ~ek~~L 69 (134)
T 3pmi_A 64 KEKQTL 69 (134)
T ss_dssp TTHHHH
T ss_pred HhHHHH
Confidence 554444
No 117
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=81.41 E-value=0.47 Score=35.24 Aligned_cols=29 Identities=31% Similarity=0.620 Sum_probs=23.2
Q ss_pred cccchhhhhh-ccccCCCccccCCCcccCc
Q 010937 144 NMLMCKFFLQ-QRCRFGTNCRLSHGIDVPL 172 (497)
Q Consensus 144 ~~~pC~~fl~-g~C~f~~~Cr~sHg~~v~~ 172 (497)
....|.-|-. |+|+.|.+|-+||-..+|-
T Consensus 19 ~~~iC~~FSayGwCp~G~~Cp~SHDiDl~~ 48 (50)
T 2fc6_A 19 PTSICDNFSAYGWCPLGPQCPQSHDISGPS 48 (50)
T ss_dssp CSCBCSHHHHTCCCTTGGGCSSBCCCCCCC
T ss_pred ccchhhhccccccCCCCCCCCccccCCCCC
Confidence 4567966666 9999999999999877663
No 118
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=79.48 E-value=2.5 Score=44.54 Aligned_cols=39 Identities=23% Similarity=0.507 Sum_probs=33.3
Q ss_pred ccCCCCCCeeEEEeCCC-ceeeeEEEeeccCCceEEEEec
Q 010937 101 DQRYSVGSKCRFRYNDG-RWYDGRIIGLEETDSAKVSFLR 139 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG-~~Y~A~I~~i~~~~~vrV~Fl~ 139 (497)
...|..|++|+|.|.+= +||+|.|.+....+.|+|.|..
T Consensus 455 ~~~~~~~~~v~a~~p~tt~fy~a~v~~~~~~~~~~~~f~~ 494 (522)
T 3mp6_A 455 TKNYPPGTKVLARYPETTTFYPAIVIGTKRDGTCRLRFDG 494 (522)
T ss_dssp CCCCCTTCEEEEECTTCSEEEEEEEEEECTTSCEEEEETT
T ss_pred ccCCCCCCEEEEECCCCcceEeEEEecCCCCCeEEEEecC
Confidence 45799999999999853 4999999998766789999976
No 119
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=79.13 E-value=10 Score=38.38 Aligned_cols=120 Identities=13% Similarity=0.064 Sum_probs=76.7
Q ss_pred ccCCCCCCeeEEEeCC--CceeeeEEEeeccCCceEEEEecCCCccccch----hh-hhhccccCCCc-----------c
Q 010937 101 DQRYSVGSKCRFRYND--GRWYDGRIIGLEETDSAKVSFLRPTSENMLMC----KF-FLQQRCRFGTN-----------C 162 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~d--G~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC----~~-fl~g~C~f~~~-----------C 162 (497)
...|.+|||..|.-.. ...+.|+|+.|-+. .++|-|.+.-...-.-| +. |--|+|.-..- -
T Consensus 141 ~~~F~vGMKLEavDp~~p~~icvATV~~V~g~-~l~v~~Dg~~~~~d~w~~~~Sp~I~PVGWCe~~g~~L~pP~gy~~~~ 219 (324)
T 3ut1_A 141 PSGFRVGMKLEAVDKKNPSFICVATVTDMVDN-RFLVHFDNWDESYDYWCEASSPHIHPVGWCKEHRRTLITPPGYPNVK 219 (324)
T ss_dssp CCSCCTTCEEEEEETTEEEEEEEEEEEEEETT-EEEEEETTSCGGGCEEECTTCTTEECTTHHHHTTCCEECCTTC--CC
T ss_pred ccccccCCEEEEecCCCCCcEEEEEEEEEECC-EEEEEECCCCCcCCEEEECCCCCcccCcHHHhcCCCCCCCCCCCCCC
Confidence 3579999999999652 34789999999875 58899887533222222 11 11255532210 0
Q ss_pred ccC--------CCcccCcccccccCCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 163 RLS--------HGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 163 r~s--------Hg~~v~~~~L~~~~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
.|+ .....|....+. ......++|..+=|....+..+.+.|+|++|.. +.+.|.|++..
T Consensus 220 ~f~W~~YL~~t~a~aaP~~~F~~---~~~~~F~~gmkLEAvD~~~p~licvATV~~v~g--~~l~v~fDgw~ 286 (324)
T 3ut1_A 220 HFSWDKYLEETNSLPAPARAFKV---KPPHGFQKKMKLEVVDKRNPMFIRVATVADTDD--HRVKVHFDGWN 286 (324)
T ss_dssp SCCHHHHHHHTTCCBCCGGGCCC---CCCCCCCTTCEEEEECSSSTTCEEEEEEEEECS--SEEEEEETTSC
T ss_pred cccHHHHHHhhCCCCCCHHHhcc---cccccCCCCCeeeccCCCCCCceeEEEEEEecC--CEEEEEeCCCC
Confidence 111 112233333332 123567899999999766788999999999986 78999997643
No 120
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=77.89 E-value=3.5 Score=34.56 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=37.0
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCC--CceEEEEEeCCCCcee--eccccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDE--HRMGEVVFRDDGSSAK--LGIEAMTL 238 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~--~~~~~V~f~~~g~~~~--~~~d~~~~ 238 (497)
..+.+|+.|++. + ++.||.|+|.++... ...|-|-|.+..+.-. |+.+-|.+
T Consensus 24 ~~~~vG~kv~v~--~-~~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI~l 79 (94)
T 2rnz_A 24 DDIIIKCQCWVQ--K-NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINL 79 (94)
T ss_dssp GGCCTTEEEEEE--C-SSCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTBCS
T ss_pred ccccCCCEEEEE--E-CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHccc
Confidence 467899999997 3 799999999988742 3467798888665432 44444443
No 121
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=76.47 E-value=14 Score=39.12 Aligned_cols=118 Identities=11% Similarity=0.002 Sum_probs=72.0
Q ss_pred CCCCCeeEEEeC--CCceeeeEEEeeccCCceEEEEecCCCccc---cch-----hhhhhccccCCCccc----------
Q 010937 104 YSVGSKCRFRYN--DGRWYDGRIIGLEETDSAKVSFLRPTSENM---LMC-----KFFLQQRCRFGTNCR---------- 163 (497)
Q Consensus 104 ~~vG~kC~A~~~--dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~---~pC-----~~fl~g~C~f~~~Cr---------- 163 (497)
|.+|||..|.-. -+..+.|+|+.|-+++..+|.|.+...... ..| --|--|+|.-..-..
T Consensus 259 Fk~GMKLEavDP~~~~~icvATV~~V~~~~~l~l~~Dg~~~~~~~d~f~~h~~Sp~I~PVGwce~ng~~L~pP~gy~~~~ 338 (456)
T 3f70_A 259 FEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDGLDWFCYHASSHAIFPATFCQKNDIELTPPKGYEAQT 338 (456)
T ss_dssp CCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEEC--------CCEEEETTCTTEECTTHHHHTTCCEECCTTCCSSS
T ss_pred ccCCCEEEEEcCCCCCcEEEEEEEEEecCCEEEEEecCCCccCCCCcEEEeCCCCCccccchHHHcCccccCCccccccc
Confidence 999999999975 235889999999877778888887532210 111 011226665421100
Q ss_pred cC--------CCcccCcccccccCCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCC
Q 010937 164 LS--------HGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDD 225 (497)
Q Consensus 164 ~s--------Hg~~v~~~~L~~~~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~ 225 (497)
|+ +....|....+. ++.-...++|...=|....+.++.+-|+|.+|.+ +++.|.|+..
T Consensus 339 f~W~~yL~~~~~~~aP~~lF~~--~~~~~~F~~GMKLEAvD~~np~~icvATV~~v~~--~~l~i~fDgw 404 (456)
T 3f70_A 339 FNWENYLEKTKSKAAPSRLFNM--DCPNHGFKVGMKLEAVDLMEPRLICVATVKRVVH--RLLSIHFDGW 404 (456)
T ss_dssp CCHHHHHHHHTCCBCCGGGSCC--CCCCCCCCTTCEEEEECTTSTTCEEEEEEEEEET--TEEEEEETTS
T ss_pred ccHHHHHHhhCCccCCHHHhCc--CCCccccccCCEEEeecCCCCCcEEEEEEEEecC--CEEEEEeCCC
Confidence 00 011122211111 1123468999999999766788999999999996 6789999754
No 122
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=72.59 E-value=4.3 Score=34.96 Aligned_cols=41 Identities=7% Similarity=-0.039 Sum_probs=31.4
Q ss_pred cccCCCeEEEeecCCC----CceEeeEEeeeeCCC-------ceEEEEEeCCCC
Q 010937 185 QSLVGSTIWALSDDKV----GIWRKAELGSWDDEH-------RMGEVVFRDDGS 227 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~d----glW~~a~i~~~d~~~-------~~~~V~f~~~g~ 227 (497)
.+.+|..||+. +.+ .+||.|.|.+|+... ..|-|.|.+-.+
T Consensus 19 ~F~~GEkVLc~--hgd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn~ 70 (110)
T 3m9p_A 19 KFHSGEKVLCF--EPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNR 70 (110)
T ss_dssp CSCTTCEEEEE--CSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCG
T ss_pred cccCCCEEEEE--cCCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCCCc
Confidence 45699999986 545 799999999886421 468899987554
No 123
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=72.26 E-value=39 Score=34.05 Aligned_cols=122 Identities=9% Similarity=-0.048 Sum_probs=76.6
Q ss_pred ccCCCCCCeeEEEeC--CCceeeeEEEeeccCCceEEEEecCCCccccch---hhhhh--ccccCCCccc------cC--
Q 010937 101 DQRYSVGSKCRFRYN--DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMC---KFFLQ--QRCRFGTNCR------LS-- 165 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~--dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC---~~fl~--g~C~f~~~Cr------~s-- 165 (497)
...|.+|||..|.-. -..++-|+|+.|-|. +.+|.|.+.....---| ..++. |+|.-.. .. |.
T Consensus 39 ~~~f~~GmklE~~D~~~~~~~~vAtV~~v~G~-rl~l~~dg~~~~~dFW~~~~S~~IhPvGwc~~~g-~~L~pP~~~~~~ 116 (331)
T 1oz2_A 39 KNGFKLGMKLEGIDPQHPSMYFILTVAEVCGY-RLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTG-HKLQPPKGYKEE 116 (331)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEEEEEETT-EEEEEETTSCGGGCEEEETTCTTEECTTHHHHHT-CCEECCTTCCGG
T ss_pred ccccCCCCEEEEEeCCCCCcEEEEEEEEecCC-EEEEEECCCCCCCCEEEcCCCCCcccCchHHhcC-CcccCccccccc
Confidence 346999999999865 235889999999864 78888887653332222 11121 5554210 00 00
Q ss_pred -----------CCcccCccccccc-CCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 166 -----------HGIDVPLSFLKKY-VPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 166 -----------Hg~~v~~~~L~~~-~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
.....|.+..+.. ..+....+++|..+=|....+..+++.|+|.+|.+ ..+.|.|++..
T Consensus 117 ~f~W~~yL~~t~a~~aP~~lF~~~~~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~g--~r~~v~~Dg~~ 187 (331)
T 1oz2_A 117 EFSWSQYLRSTRAQAAPKHLFVSQSHSPPPLGFQVGMKLEAVDRMNPSLVCVASVTDVVD--SRFLVHFDNWD 187 (331)
T ss_dssp GCCHHHHHHHHTCCBCCGGGCSCSSCSCCCTTCCTTCEEEEECTTSTTCEEEEEEEEEET--TEEEEEETTSC
T ss_pred cCcHHHHHHhcCCCCCChHHhcccCCCCCccccccccEEEeccCCCCCcEEEEEEEEeeC--CEEEEEeCCCC
Confidence 0112222222221 12345678999999998655678999999999997 46889998653
No 124
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=71.56 E-value=6.6 Score=33.26 Aligned_cols=59 Identities=8% Similarity=0.045 Sum_probs=39.0
Q ss_pred ccccccCCCCcccccCCCeEEEeecCC----CCceEeeEEeeeeCC-------CceEEEEEeCCCCce--eecccccc
Q 010937 173 SFLKKYVPTSWEQSLVGSTIWALSDDK----VGIWRKAELGSWDDE-------HRMGEVVFRDDGSSA--KLGIEAMT 237 (497)
Q Consensus 173 ~~L~~~~~pd~~~l~~Gs~~la~~~~~----dglW~~a~i~~~d~~-------~~~~~V~f~~~g~~~--~~~~d~~~ 237 (497)
.+|+...+ .+.+|..||+- ++ .++||.|.|.+|... ...|-|-|.+-.++- -|+.+-|+
T Consensus 11 ~~~~~~~~----~f~~GEkVLc~--h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~rwDEWV~edRil 82 (101)
T 3m9q_A 11 TELRDETP----LFHKGEIVLCY--EPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRAVRATVLL 82 (101)
T ss_dssp --CCCCCC----CCCTTCEEEEE--CCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCGGGCEEECGGGEE
T ss_pred hhhccCCC----cccCCCEEEEE--ecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCCCCcCceeecCHHHcc
Confidence 45565553 36799999986 55 489999999998652 246889998765532 34444433
No 125
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=71.45 E-value=27 Score=36.68 Aligned_cols=119 Identities=13% Similarity=0.076 Sum_probs=74.2
Q ss_pred cCCCCCCeeEEEeC--CCceeeeEEEeeccCCceEEEEecCCCcc--ccch-----hh-hhhccccCCCccc------cC
Q 010937 102 QRYSVGSKCRFRYN--DGRWYDGRIIGLEETDSAKVSFLRPTSEN--MLMC-----KF-FLQQRCRFGTNCR------LS 165 (497)
Q Consensus 102 ~~~~vG~kC~A~~~--dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~--~~pC-----~~-fl~g~C~f~~~Cr------~s 165 (497)
..|.+|||..|.-. -.....|+|+.|-+++..+|.|.+.-... .--| ++ |--|+|.-.. .. |.
T Consensus 253 ~~F~~GMKLEavDp~~p~~icvATV~~v~~~g~l~l~~Dg~~~~~~~d~~~~h~~Sp~I~PVGwc~~ng-~~L~pP~g~~ 331 (437)
T 3feo_A 253 EWFKEGMKLEAIDPLNLSTICVATIRKVLADGFLMIGIDGSEAADGSDWFCYHATSPSIFPVGFCEINM-IELTPPRGYT 331 (437)
T ss_dssp SCCCTTCEEEEEETTEEEEEEEEEEEEECGGGEEEEEETTCCC-CCTTCEEEETTCTTEECTTHHHHHT-CCEECCTTCC
T ss_pred cccccCCEEEEEcCCCCceEEEEEEEEEccCCEEEEEeCCCCCCCCCCeEEeeCCCCCcccchhHhhcC-ccccCCCCcc
Confidence 45999999999975 23578999999987667778887653221 1111 11 1115554321 11 11
Q ss_pred C-------------CcccCcccccccCCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCC
Q 010937 166 H-------------GIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDD 225 (497)
Q Consensus 166 H-------------g~~v~~~~L~~~~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~ 225 (497)
+ ....|.+..+. ++.-...++|...=|...-+..+-+.|+|.+|.+ .++.|.|++.
T Consensus 332 ~~~f~W~~yL~~t~~~~aP~~lF~~--~~~~~~F~~GMKLEAvD~~np~~IcvATV~~v~~--~~l~v~fDgw 400 (437)
T 3feo_A 332 KLPFKWFDYLRETGSIAAPVKLFNK--DVPNHGFRVGMKLEAVDLMEPRLICVATVTRIIH--RLLRIHFDGW 400 (437)
T ss_dssp SSSCCHHHHHHHHTCCBCCGGGGCC--CCCCCCCCTTCEEEEECTTSTTCEEEEEEEEEET--TEEEEEETTS
T ss_pred cCcchHHHHHHhhCCccCCHHHcCC--CCccccCccCCEEEeecCCCCCcEEEEEEeEEcC--CEEEEEECCC
Confidence 1 11122222221 1223568999999999766788999999999996 6889999754
No 126
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=70.90 E-value=18 Score=29.42 Aligned_cols=54 Identities=17% Similarity=0.249 Sum_probs=46.4
Q ss_pred HHhhhcHHHHHHHHHHHHHHHHHHHhc---cCchHHHHHHHHHHHHHHHHHHHHHHH
Q 010937 424 RDLVAYDDEIKDLRVRVVKLEEMVNRN---KNEKAVFEAAMRKLNETRKALAQAEAA 477 (497)
Q Consensus 424 r~l~~~~e~i~~l~~~i~kL~e~l~Rn---~~~~~~~~~i~~kL~~~~~~L~~~~a~ 477 (497)
|.|-.+..+|..|+.+|..|+..++-- ..+...+..+...|..++.+|..+...
T Consensus 22 rEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~er 78 (89)
T 2lw1_A 22 RELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER 78 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457788999999999999999999864 468888999999999999999887665
No 127
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=70.31 E-value=9.2 Score=31.89 Aligned_cols=39 Identities=5% Similarity=-0.078 Sum_probs=29.9
Q ss_pred CCCeEEEeecCCCCceEeeEEeeeeCCC-----ceEEEEEeCCCCc
Q 010937 188 VGSTIWALSDDKVGIWRKAELGSWDDEH-----RMGEVVFRDDGSS 228 (497)
Q Consensus 188 ~Gs~~la~~~~~dglW~~a~i~~~d~~~-----~~~~V~f~~~g~~ 228 (497)
.|+.|++. +.+++||.|+|.++.... ..|-|.|.+..+.
T Consensus 17 ~~e~vlc~--~~dg~~yeAeIl~ir~~~~~~~~~~YYVHY~g~NkR 60 (92)
T 2bud_A 17 PDKIYFIR--REDGTVHRGQVLQSRTTENAAAPDEYYVHYVGLNRR 60 (92)
T ss_dssp TTSCEEEE--CTTSCEEEEEEEEEECTTTCSSCCEEEEECSSSCTT
T ss_pred CCCEEEEE--eCCCCEEEEEEEEEeeccCCCCCcEEEEEeCCcccc
Confidence 37789987 668999999999987532 3677988876554
No 128
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=68.74 E-value=11 Score=38.02 Aligned_cols=122 Identities=12% Similarity=0.018 Sum_probs=74.4
Q ss_pred ccCCCCCCeeEEEeCC--CceeeeEEEeeccCCceEEEEecCCCccccchh---h--hhhccccCCCc----------cc
Q 010937 101 DQRYSVGSKCRFRYND--GRWYDGRIIGLEETDSAKVSFLRPTSENMLMCK---F--FLQQRCRFGTN----------CR 163 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~d--G~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~---~--fl~g~C~f~~~----------Cr 163 (497)
...|.+|||..|.-.. ..++.|+|+.|-| ...+|.|.+.....---|- . |--|+|.-... -.
T Consensus 34 ~~~F~~GMKLE~~D~~~~~~~~vAtV~~v~G-~rl~l~~dg~~~~~dFW~~~~S~~IhPvGwc~~~g~~L~pP~g~~~~~ 112 (324)
T 3ut1_A 34 KNGFKVGMKLEGVDPEHQSVYCVLTVAEVCG-YRIKLHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYKEEE 112 (324)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEEEEEET-TEEEEEETTSCGGGCEEEETTCSSEECTTHHHHHTCCEECCTTCCTTT
T ss_pred CCcccCCCEEEEecCCCCCcEEEEEEEEEEC-CEEEEEECCCCCCCCEEEeCCCCCeeccchhHhcCeeccCCCCCcCCC
Confidence 3569999999999752 3588999999977 4688888775322222220 0 11144433100 00
Q ss_pred cC--------CCcccCcccccccC-CCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCC
Q 010937 164 LS--------HGIDVPLSFLKKYV-PTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDD 225 (497)
Q Consensus 164 ~s--------Hg~~v~~~~L~~~~-~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~ 225 (497)
|+ .....|....+... .+....+++|...=|....+..+.+.|+|.+|.+ +.+.|.|++.
T Consensus 113 f~W~~yL~~~~a~~aP~~lF~~~~~~~~~~~F~vGMKLEavDp~~p~~icvATV~~V~g--~~l~v~~Dg~ 181 (324)
T 3ut1_A 113 FNWQTYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAVDKKNPSFICVATVTDMVD--NRFLVHFDNW 181 (324)
T ss_dssp CCHHHHHHHTTCCBCCGGGCTTTTCCCCCCSCCTTCEEEEEETTEEEEEEEEEEEEEET--TEEEEEETTS
T ss_pred CCHHHHHHHhCcccCChHHcccCCCccCccccccCCEEEEecCCCCCcEEEEEEEEEEC--CEEEEEECCC
Confidence 00 01122333333221 2234678999999998665567889999999996 5689999754
No 129
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=67.40 E-value=5 Score=35.78 Aligned_cols=29 Identities=14% Similarity=0.342 Sum_probs=24.2
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccC
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEET 130 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~ 130 (497)
...|.+|++|+|.| .+.||.|.|+.+...
T Consensus 7 ~~~f~~gekvl~~h-g~llYeAKVl~v~~~ 35 (136)
T 2k3y_A 7 EQEFALGGRVLAFH-GPLMYEAKILKIWDP 35 (136)
T ss_dssp GGSCCTTSEEEEEC-SSCEEEEEEEEEEET
T ss_pred ccccCCCCEEEEEE-CCeeEEEEEEEEEec
Confidence 45799999999999 457999999988653
No 130
>2ckk_A KIN17; beta barrel, ribosomal protein, ribonucleoprotein, nuclear protein; 1.45A {Homo sapiens}
Probab=66.90 E-value=18 Score=31.64 Aligned_cols=100 Identities=13% Similarity=0.188 Sum_probs=64.8
Q ss_pred CCCCCeeEEEeC---CCcee--eeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccccccc
Q 010937 104 YSVGSKCRFRYN---DGRWY--DGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLKKY 178 (497)
Q Consensus 104 ~~vG~kC~A~~~---dG~~Y--~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~~~ 178 (497)
+.+|-.|+.... +| || .++|..+.+...+.|..+.- | +-..|..+.|...
T Consensus 15 l~~~I~Vrii~k~~~~g-~y~~KgvV~~V~~~~~c~V~l~~~------------------g------~~v~v~q~~LETV 69 (127)
T 2ckk_A 15 LQPEIIVKIITKKLGEK-YHKKKAIVKEVIDKYTAVVKMIDS------------------G------DKLKLDQTHLETV 69 (127)
T ss_dssp CCTTBEEEECCSTTCGG-GTTCEEEEEEEETTTEEEEEETTT------------------C------CEEEEEGGGEEEC
T ss_pred ccCCeEEEEEEccCCCc-ccCceEEEEEecCCCeEEEEECCC------------------C------CEEEEchHHcEEe
Confidence 366777777754 45 88 58888886656677766431 1 1123444555554
Q ss_pred CCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCC---CCce-eeccccc
Q 010937 179 VPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDD---GSSA-KLGIEAM 236 (497)
Q Consensus 179 ~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~---g~~~-~~~~d~~ 236 (497)
.| +.|..|+...+ ..--..|++.++|.+...+.|.+++. +... .++.+.|
T Consensus 70 iP------~~g~~V~Iv~G--~~rG~~g~L~~id~~~~~~~V~l~~~~~~~~~v~~l~~ddi 123 (127)
T 2ckk_A 70 IP------APGKRILVLNG--GYRGNEGTLESINEKTFSATIVIETGPLKGRRVEGIQYEDI 123 (127)
T ss_dssp CC------CTTCEEEECSS--TTTTCEEEEEEEEGGGTEEEEEECSSTTTTCEEEEEEGGGE
T ss_pred cC------CCCCEEEEEec--ccCCcEEEEEEEeCCCcEEEEEEccCCCCCCEEEeeCHHHh
Confidence 44 37999999865 45568899999998766788888763 4333 3555544
No 131
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=63.73 E-value=40 Score=35.52 Aligned_cols=122 Identities=8% Similarity=0.003 Sum_probs=75.0
Q ss_pred ccCCCCCCeeEEEeCC--CceeeeEEEeeccCCceEEEEecCCCcc----ccch----h-hhhhccccCCCcc-------
Q 010937 101 DQRYSVGSKCRFRYND--GRWYDGRIIGLEETDSAKVSFLRPTSEN----MLMC----K-FFLQQRCRFGTNC------- 162 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~d--G~~Y~A~I~~i~~~~~vrV~Fl~pt~~~----~~pC----~-~fl~g~C~f~~~C------- 162 (497)
...|.+|||..|.-.. ...+.|+|+.|-+.+..+|.|.+.-... ...| + -|--|+|....-.
T Consensus 265 ~~~F~~GMKLEavDp~~~~~icvATV~~V~~~~~~~v~~Dg~~~~~~~~d~f~~~~~S~~I~PvGwce~ng~~L~pP~gy 344 (447)
T 3h6z_A 265 TNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGY 344 (447)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEETTSCTTCTTTTCEEEETTCTTEECTTHHHHTTCCCCCCTTC
T ss_pred ccccccccEEEeeccCCCCcEEEEEEEEeccCCEEEEEECCCCcccCCCccEEEeCCCCCcCccchHHhcCccCCCCCCc
Confidence 4579999999999652 3578999999987767788887631110 0111 0 1122555432110
Q ss_pred ---ccC--------CCcccCcccccccCCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 163 ---RLS--------HGIDVPLSFLKKYVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 163 ---r~s--------Hg~~v~~~~L~~~~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
.|+ .....|....+.. +.-...++|...=|...-+.++.+.|+|.+|.. ..+.|.|++..
T Consensus 345 ~~~~f~W~~yl~~~~a~~aP~~lF~~~--~~~~~F~~gmkLEAvD~~np~~icvATV~~v~~--~~~~i~fDgw~ 415 (447)
T 3h6z_A 345 DSRTFTWEGYLSDTGAVAAGQHLFHDI--IPDHGFEVGMSLECADLMDPRLVCVATVARVVG--RLLKVHFDGWT 415 (447)
T ss_dssp CTTTCCHHHHHHHHTCCBCCGGGSCCC--CCCCCCCTTCEEEEECTTSTTCEEEEEEEEEET--TEEEEECTTSC
T ss_pred cccCCcHHHHHHhhCCCcCcHHHcCCC--CCCCccccCCEEEeecCCCCCcEEEEEEeEecC--CEEEEEeCCCC
Confidence 011 0111112111111 122567899999998766789999999999997 77899998654
No 132
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=60.01 E-value=16 Score=31.21 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=33.2
Q ss_pred ccCCCCCCeeEEEeC-C-CceeeeEEEeeccCCceEEEEecCCC
Q 010937 101 DQRYSVGSKCRFRYN-D-GRWYDGRIIGLEETDSAKVSFLRPTS 142 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-d-G~~Y~A~I~~i~~~~~vrV~Fl~pt~ 142 (497)
...|.+|||..|.-. + ..++.|+|+.|.+. .++|-|.+.-.
T Consensus 11 ~~~F~~GMKLEAvD~~~p~~icvATV~~v~g~-rl~v~fDGw~~ 53 (107)
T 1wjq_A 11 PHGFQKKMKLEVVDKRNPMFIRVATVADTDDH-RVKVHFDGWNN 53 (107)
T ss_dssp SSSCCSSCEEEEECTTCTTCEEEEEEEEECSS-CEEEECSSSCG
T ss_pred cccCCCCCEEEEEcCCCCCcEEeEEEEEecCC-EEEEEeCCCCC
Confidence 457999999999975 2 35899999999655 79999988754
No 133
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=57.51 E-value=15 Score=33.60 Aligned_cols=36 Identities=36% Similarity=0.621 Sum_probs=27.9
Q ss_pred cCCCCCCeeEEEeC------CCceeeeEEEeeccCCceEEEE
Q 010937 102 QRYSVGSKCRFRYN------DGRWYDGRIIGLEETDSAKVSF 137 (497)
Q Consensus 102 ~~~~vG~kC~A~~~------dG~~Y~A~I~~i~~~~~vrV~F 137 (497)
....||+++|+=|. .|-||.|.|+.+....+.+=+|
T Consensus 91 ~~L~vGqvVMvNYN~d~PkerGfWYDaeI~~~~~~rT~rEl~ 132 (161)
T 3db3_A 91 QDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELY 132 (161)
T ss_dssp GGCCTTCEEEEEECSSSTTSCCEEEEEEEEEEEECSSCEEEE
T ss_pred HHCCcCcEEEEecCCCCccccceeEEEEEeeehhhhhhheeE
Confidence 45789999999995 4779999999886655555433
No 134
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=56.44 E-value=13 Score=35.81 Aligned_cols=38 Identities=32% Similarity=0.555 Sum_probs=28.6
Q ss_pred cCCCCCCeeEEEe------CCCceeeeEEEeeccCCceEEEEec
Q 010937 102 QRYSVGSKCRFRY------NDGRWYDGRIIGLEETDSAKVSFLR 139 (497)
Q Consensus 102 ~~~~vG~kC~A~~------~dG~~Y~A~I~~i~~~~~vrV~Fl~ 139 (497)
..+.+|+++|+-| .+|-||.|.|..+....+.+=+|.+
T Consensus 74 ~~l~~g~~vm~nyn~~~~~~~G~~y~~~I~~~~~~r~~~~~~a~ 117 (226)
T 3ask_A 74 QDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYAN 117 (226)
T ss_dssp GGCCTTCEEEEEECTTSTTSCCEEEEEEEEEEEECSSCEEEEEE
T ss_pred cccccCcEEEEecccCCccccCceeehhhhhhhhcccccceeeE
Confidence 3568999999999 4899999999988765444433333
No 135
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=55.21 E-value=57 Score=27.17 Aligned_cols=59 Identities=17% Similarity=0.151 Sum_probs=47.5
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHh
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQASASHEVSS 487 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~ 487 (497)
..+.+++|..|++++.-|+.-+.+-.. .+.....+|.+..+..+.+.+.-+++.+.++-
T Consensus 39 ~~~~E~Ei~sL~kk~~~lE~eld~~ee---~L~ea~~kLee~ek~~~~aE~ev~~L~Rriql 97 (101)
T 3u1c_A 39 SKQLEDDIVQLEKQLRVTEDSRDQVLE---ELHKSEDSLLFAEENAAKAESEVASLNRRIQL 97 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467789999999999999988887533 45567788888888898888898888887753
No 136
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=54.78 E-value=17 Score=30.52 Aligned_cols=28 Identities=11% Similarity=0.267 Sum_probs=22.1
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeec
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLE 128 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~ 128 (497)
...+.+|+-|-|+...--|+||+|+...
T Consensus 6 g~~~~~GdlVwaK~~g~p~WPa~V~~~~ 33 (110)
T 2daq_A 6 SGKLHYKQIVWVKLGNYRWWPAEICNPR 33 (110)
T ss_dssp CCSCCSSEEEEEECSSSCEEEEEECCTT
T ss_pred CCCCCCCCEEEEEeCCCCCCceeeCChh
Confidence 3568899999999853369999998763
No 137
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=53.88 E-value=27 Score=29.78 Aligned_cols=47 Identities=13% Similarity=-0.072 Sum_probs=37.1
Q ss_pred cCCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCC
Q 010937 178 YVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDG 226 (497)
Q Consensus 178 ~~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g 226 (497)
|.+.....+++|...=|....+..+|+.|+|.+|.. ..+.|.|+...
T Consensus 6 f~~~p~~~F~~GMKLEAvD~~~p~~icvATV~~v~g--~rl~v~fDGw~ 52 (107)
T 1wjq_A 6 SGVKPPHGFQKKMKLEVVDKRNPMFIRVATVADTDD--HRVKVHFDGWN 52 (107)
T ss_dssp CCCCCSSSCCSSCEEEEECTTCTTCEEEEEEEEECS--SCEEEECSSSC
T ss_pred cccCCcccCCCCCEEEEEcCCCCCcEEeEEEEEecC--CEEEEEeCCCC
Confidence 344445678899999998766678999999999976 67899998654
No 138
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=57.51 E-value=3 Score=34.19 Aligned_cols=42 Identities=5% Similarity=-0.061 Sum_probs=31.8
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCC--CceEEEEEeCCCCc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDE--HRMGEVVFRDDGSS 228 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~--~~~~~V~f~~~g~~ 228 (497)
..+.+|..|++. + ++.||.|.|.+++.. ...|-|.|.+..+.
T Consensus 11 ~~~~~Gekv~~~--~-~~~~y~AkIl~i~~~~~~~~YyVHY~GwNkR 54 (85)
T 2lrq_A 11 TLFVDGERVLCF--H-GPLIYEAKVLKTKPDATPVEYYIHYAGWSKN 54 (85)
Confidence 467899999997 3 578999999988742 24677888875544
No 139
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=47.99 E-value=12 Score=33.31 Aligned_cols=26 Identities=15% Similarity=0.125 Sum_probs=21.9
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeC
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDD 213 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~ 213 (497)
.+.+|..|||. | ..+||.|.|+.+..
T Consensus 9 ~f~~gekvl~~--h-g~llYeAKVl~v~~ 34 (136)
T 2k3y_A 9 EFALGGRVLAF--H-GPLMYEAKILKIWD 34 (136)
T ss_dssp SCCTTSEEEEE--C-SSCEEEEEEEEEEE
T ss_pred ccCCCCEEEEE--E-CCeeEEEEEEEEEe
Confidence 46799999995 4 68999999998875
No 140
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=47.26 E-value=23 Score=41.54 Aligned_cols=49 Identities=10% Similarity=0.154 Sum_probs=40.7
Q ss_pred ccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 186 SLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 186 l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
...|..||+. ++...|-.|+|.+.+. +.++|.+.++|+...|+.+.|.+
T Consensus 28 ~~~~~~vw~~--~~~~~~~~~~v~~~~~--~~~~v~~~~~~~~~~~~~~~~~~ 76 (1184)
T 1i84_S 28 WSAKKLVWVP--SEKHGFEAASIKEEKG--DEVTVELQENGKKVTLSKDDIQK 76 (1184)
T ss_dssp TTCTTEEEEC--CTTTSSEEEEEEEEET--TEEEEEETTTCCEEEEETTSCEE
T ss_pred cccCCeEEEE--CCCCCeEEEEEEEecC--CeEEEEEcCCCcEEEeeHHHccC
Confidence 3479999998 6678899999999885 67899998899988888777664
No 141
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=47.05 E-value=60 Score=28.66 Aligned_cols=62 Identities=13% Similarity=0.111 Sum_probs=33.4
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhHHh
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQASASHEVSSREK 490 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~~~~ 490 (497)
+|+..+++..|+.++..+...+..-+-+. ..++.+++++.+++..++.....+...+..-+.
T Consensus 70 l~k~~~~~~~L~~~l~~~~kE~~~lK~el---~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~ 131 (138)
T 3hnw_A 70 YFKAKKMADSLSLDIENKDKEIYDLKHEL---IAAQIKAESSAKEIKELKSEINKYQKNIVKLET 131 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777777777766655555443322 234445555555555555555555444444333
No 142
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=46.55 E-value=93 Score=25.67 Aligned_cols=58 Identities=22% Similarity=0.300 Sum_probs=45.4
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQASASHEVS 486 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~ 486 (497)
.-+..++|..|++++..|+.-+.+-.. .+..+..+|....+....+.+.-++|.+.++
T Consensus 39 ~~~~E~ei~sL~kKiq~lE~eld~~~e---~l~~a~~kLe~~ek~~~~AE~evasLnRriq 96 (101)
T 3u59_A 39 CKQLEEEQQGLQKKLKGTEDEVEKYSE---SVKEAQEKLEQAEKKATDAEAEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466788888899988888888775432 4556778888888888888888888888775
No 143
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=46.51 E-value=1.2e+02 Score=26.11 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=55.5
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhHHh
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKN-EKAVFEAAMRKLNETRKALAQAEAAQASASHEVSSREK 490 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~-~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~~~~ 490 (497)
+++..+++..+..+...|++.+...+. ++.-+..|..++......|..++.+.....++++.+..
T Consensus 15 ~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL~ 80 (112)
T 1x79_B 15 LRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQMA 80 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577788888888888888888888886 88888999999999999999999998888888877654
No 144
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=46.43 E-value=25 Score=39.93 Aligned_cols=49 Identities=16% Similarity=0.089 Sum_probs=40.5
Q ss_pred ccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 186 SLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 186 l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
...|..||+. ++...|-.|+|.+.+. +.++|...++|+...|+.+.+.+
T Consensus 28 ~~~~~~vWv~--~~~~~~~~~~v~~~~~--~~~~v~~~~~g~~~~v~~~~~~~ 76 (837)
T 1kk8_A 28 FDGKKNCWVP--DEKEGFASAEIQSSKG--DEITVKIVADSSTRTVKKDDIQS 76 (837)
T ss_dssp CCTTTEEEEE--ETTTEEEEEEEEEEET--TEEEEEETTTCCEEEEEGGGCEE
T ss_pred cccCCEEEEE--CCCCCeeEEEEEeecC--CeEEEEEcCCCceEEeeHHHccc
Confidence 4578999998 5578899999999876 67899998899888887777664
No 145
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=46.12 E-value=37 Score=30.27 Aligned_cols=52 Identities=19% Similarity=0.346 Sum_probs=39.0
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCC------CceEEEEEeCCCCceeecccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDE------HRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~------~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
..+.+|..||||-+ .--|.+|+|.+.... .+.|.|.|=++...+-|..+.|.
T Consensus 10 ~~~~~GDlVWaKvk--GyPwWPa~V~~~~~~~~~~~~~~~~~V~FFG~~~~awv~~~~L~ 67 (147)
T 1khc_A 10 KEFGIGDLVWGKIK--GFSWWPAMVVSWKATSKRQAMPGMRWVQWFGDGKFSEISADKLV 67 (147)
T ss_dssp SSCCTTCEEEEEET--TTEEEEEEEECGGGTTSCCCCTTEEEEEETTTCCEEEEEGGGCE
T ss_pred ccCcCCCEEEEecC--CcCCCCEEeccchhhhcccCCCCeEEEEEecCCCEEEEcHHHCc
Confidence 45679999999964 667999999876552 25788999887777777655544
No 146
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=45.59 E-value=36 Score=30.24 Aligned_cols=58 Identities=17% Similarity=0.066 Sum_probs=39.2
Q ss_pred cCCCCcccccCCCeEEEeecCCCCceEeeEEeeeeCC-----CceEEEEEeCCCCceeecccccc
Q 010937 178 YVPTSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDE-----HRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 178 ~~~pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~-----~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
|.++.-....+|..||||.+ .--|=+|+|...... .+.|.|.|=++...+-|....|.
T Consensus 15 ~~~~~~~~f~~GdlVwaK~~--g~p~WPa~V~~~~~~~~~~~~~~~~V~FfG~~~~awv~~~~l~ 77 (153)
T 4fu6_A 15 YFQGMTRDFKPGDLIFAKMK--GYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIF 77 (153)
T ss_dssp TTTCSGGGCCTTCEEEECCT--TSCCEEEEECCCC---CCCCTTCEEEEETTTCCEEEECGGGEE
T ss_pred HHhhcccCCCCCCEEEEeCC--CCCCCCEEEeEchhhccCCCCCEEEEEecCCCCeEEeCHHHcc
Confidence 33444456779999999954 556999999866432 25688988877666666544444
No 147
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=44.98 E-value=52 Score=34.73 Aligned_cols=121 Identities=11% Similarity=-0.016 Sum_probs=65.1
Q ss_pred cCCCCCCeeEEEeC--CCceeeeEEEeeccCCceEEEEecCCCccccchh---hhh--hccccCCCccccCCC-------
Q 010937 102 QRYSVGSKCRFRYN--DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCK---FFL--QQRCRFGTNCRLSHG------- 167 (497)
Q Consensus 102 ~~~~vG~kC~A~~~--dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~---~fl--~g~C~f~~~Cr~sHg------- 167 (497)
..|.+|||..|.-. -.....|+|+.|-| ++++|.|...-.....-|. .++ -|+|.-.. +.+.-.
T Consensus 152 ~~F~~GmkLE~vD~~~~~~~~vAtV~~v~g-~rl~l~~~~~~~~~dfWc~~~Sp~IhPVGW~~~~G-~~L~pP~~~~dw~ 229 (456)
T 3f70_A 152 YPFRQGMRLEVVDKSQVSRTRMAVVDTVIG-GRLRLLYEDGDSDDDFWCHMWSPLIHPVGWSRRVG-HGIKMSERRSDMA 229 (456)
T ss_dssp CSSCTTCEEEEECTTCTTCEEEEEEEEEET-TEEEEEECC----CCEEEETTCTTEEETTHHHHHT-C------------
T ss_pred CCCCCCCEEEEECCCCCcceEEEEEEEEEC-CEEEEEEcCCCCCCceEEeCCCCCeeccccHhhcC-CccCCCccchhHH
Confidence 56999999999975 23567999999876 4788888754322222220 111 15554311 000000
Q ss_pred ---------cccCcccccccCCCCccc--ccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCC
Q 010937 168 ---------IDVPLSFLKKYVPTSWEQ--SLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDD 225 (497)
Q Consensus 168 ---------~~v~~~~L~~~~~pd~~~--l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~ 225 (497)
...|.+-.+....+.-.. +++|...=|....+...-+-|+|.+|-. .++..|.|+++
T Consensus 230 ~~~~~~~~~~~ap~~lF~~~~~~~~~~~~Fk~GMKLEavDP~~~~~icvATV~~V~~-~~~l~l~~Dg~ 297 (456)
T 3f70_A 230 HHPTFRKIYCDAVPYLFKKVRAVYTEGGWFEEGMKLEAIDPLNLGNICVATVCKVLL-DGYLMICVDGG 297 (456)
T ss_dssp --------------------CEEECCSCCCCTTCEEEEEETTEEEEEEEEEEEEECS-TTEEEEEEC--
T ss_pred HHHHhhcccccCCHHHhccccccccccccccCCCEEEEEcCCCCCcEEEEEEEEEec-CCEEEEEecCC
Confidence 001111111111111122 7889999888765667889999999973 36677888743
No 148
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=44.66 E-value=4.6 Score=38.85 Aligned_cols=26 Identities=23% Similarity=0.622 Sum_probs=0.0
Q ss_pred cccchhhhhhccccCCCccccCCCcccC
Q 010937 144 NMLMCKFFLQQRCRFGTNCRLSHGIDVP 171 (497)
Q Consensus 144 ~~~pC~~fl~g~C~f~~~Cr~sHg~~v~ 171 (497)
...||+|= -+|.||.+|+|-|.+...
T Consensus 191 ~~~~~~~~--~~~~~~~~~~~~~~~~~~ 216 (223)
T 3v33_A 191 RKQPCPYG--RKCTYGIKCRFFHPERPS 216 (223)
T ss_dssp ----------------------------
T ss_pred CCCCCCCC--cccccCCcceecCCccCC
Confidence 46789984 489999999999987544
No 149
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=44.26 E-value=69 Score=26.91 Aligned_cols=69 Identities=13% Similarity=0.135 Sum_probs=49.3
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhcc----CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhHHhhhhc
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNK----NEKAVFEAAMRKLNETRKALAQAEAAQASASHEVSSREKEKRW 494 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~----~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~~~~~k~~ 494 (497)
+..-+++|.++++.+..|.+....=. .+-.++..|...+..+......+..++..+.+.+.+..|.|-|
T Consensus 16 i~eR~~eI~~Ie~~I~eL~~iF~dla~lV~eQge~Id~Ie~nv~~a~~~v~~g~~eL~kA~~yqk~~rkk~~i 88 (109)
T 3hd7_B 16 IETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKKIM 88 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccee
Confidence 34456777777777777777644332 2556778888888899988988888888888877666554433
No 150
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=43.70 E-value=1.1e+02 Score=23.77 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC--chHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010937 430 DDEIKDLRVRVVKLEEMVNRNKN--EKAVFEAAMRKLNETRKALAQAEAAQAS 480 (497)
Q Consensus 430 ~e~i~~l~~~i~kL~e~l~Rn~~--~~~~~~~i~~kL~~~~~~L~~~~a~~~s 480 (497)
..+..+|++++.+|+..+..=.. .-+-.+.|.++++.+-.+|..+..+..+
T Consensus 5 ~~~~~~l~~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~ 57 (65)
T 3sja_C 5 SKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQS 57 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 46678888899888887766554 6777889999999999998888877665
No 151
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=43.53 E-value=37 Score=28.70 Aligned_cols=52 Identities=15% Similarity=0.111 Sum_probs=37.0
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCC-----CceEEEEEeCCCCceeecccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDE-----HRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~-----~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
..+.+|..||||.+ .--|-+|+|.++... .+.|-|.|=++...+-|+...|.
T Consensus 18 ~~~~~GdlVwaK~k--GyP~WPa~V~~~p~~~~k~~~~~~~V~FFGt~~~awv~~~~l~ 74 (110)
T 1ri0_A 18 KEYKCGDLVFAKMK--GYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLF 74 (110)
T ss_dssp SSCCTTCEEEEEET--TEEEEEEEEECCCSSSSCCCSSCEEEEETTTTEEEEECSTTEE
T ss_pred CCCCCCCEEEEEeC--CCCCCCEEEecccHhhcCCCCCEEEEEEecCCCEEEECHHHcc
Confidence 35578999999964 667999999876532 36788988776655556544444
No 152
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=43.41 E-value=32 Score=38.77 Aligned_cols=47 Identities=11% Similarity=0.093 Sum_probs=37.8
Q ss_pred cCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 187 LVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 187 ~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
..|..||+. ++...|-.|+|.+.+. +.++|. .++|+...|+.+.|.+
T Consensus 32 ~~~~~vWv~--d~~~~~~~~~v~~~~~--~~~~v~-~~~g~~~~v~~~~v~~ 78 (783)
T 4db1_A 32 DLKKDVFVP--DDKQEFVKAKIVSREG--GKVTAE-TEYGKTVTVKEDQVMQ 78 (783)
T ss_dssp CTTTEEEEE--CSSSSEEEEEEEEECS--SEEEEE-ETTTEEEEEEGGGCEE
T ss_pred cCCCEEEEE--CCCCCEEEEEEEEecC--CEEEEE-ECCCCEEeCCHHHccc
Confidence 478999998 6688899999999775 567887 4678888888777664
No 153
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=42.50 E-value=30 Score=30.53 Aligned_cols=28 Identities=18% Similarity=0.458 Sum_probs=23.3
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEET 130 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~ 130 (497)
..|.+|.+|.+.| .|.-|.|.|+.|-+.
T Consensus 6 p~f~~gE~VlcfH-g~~~YeAKIl~i~d~ 33 (130)
T 3e9g_A 6 QEFALGGRCLAFH-GPLMYEAKILKIWDP 33 (130)
T ss_dssp -CCCTTCEEEEEE-TTEEEEEEEEEEEET
T ss_pred ccccCCCEEEEEe-CCcceeeEEEEeeCC
Confidence 4699999999999 467999999999543
No 154
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=41.77 E-value=30 Score=40.36 Aligned_cols=48 Identities=10% Similarity=0.058 Sum_probs=33.6
Q ss_pred cCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeC-CCCceeeccccccc
Q 010937 187 LVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRD-DGSSAKLGIEAMTL 238 (497)
Q Consensus 187 ~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~-~g~~~~~~~d~~~~ 238 (497)
..|..||+. ++...|-.|+|.+.+. +.++|...+ .|+...+..+.+.+
T Consensus 2 e~G~~VWv~--d~~~~~~~a~v~~~~~--~~~~v~~~~~~g~~~~~~~~~v~~ 50 (1052)
T 4anj_A 2 EDGKPVWAP--HPTDGFQVGNIVDIGP--DSLTIEPLNQKGKTFLALINQVFP 50 (1052)
T ss_dssp --CCCEEEE--ETTTEEEEEEEEEECS--SEEEEEEC----CCEEEEGGGCEE
T ss_pred CCCCEEEEE--cCCCCEEEEEEEEEcC--CcEEEEEeCCCCcEEEecHHHcCC
Confidence 579999998 5578899999998876 446776544 67777777676665
No 155
>4g2k_A General control protein GCN4, envelope glycoprote chimera; GP2-GCN4 fusion, viral protein; 1.90A {Saccharomyces cerevisiae}
Probab=40.84 E-value=90 Score=27.16 Aligned_cols=56 Identities=18% Similarity=0.242 Sum_probs=25.5
Q ss_pred hcHHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 010937 428 AYDDEIKDLRVRVVKLEEMVNRNKN-EKAVFEAAMRKLNETRKALAQAEAAQASASH 483 (497)
Q Consensus 428 ~~~e~i~~l~~~i~kL~e~l~Rn~~-~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~ 483 (497)
+++++|+.+-.++=.++..++|=++ =-.....+.+.-+.....|..+..++.++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~L~~~l~~~aN~T~~aL~~L~~q~Tslr~ 74 (125)
T 4g2k_A 18 QIEDKIEEILSKIYHIENEIARIKKLIGNLVSRLRRLANQTAKSLELLLRVTTEERT 74 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444443 2223333444444445555555555444443
No 156
>4b6m_A Tubulin-specific chaperone, putative; structural protein; 1.59A {Trypanosoma brucei}
Probab=40.41 E-value=15 Score=30.00 Aligned_cols=76 Identities=21% Similarity=0.349 Sum_probs=41.7
Q ss_pred cCCCCCCeeEEEeCC--Cc-eeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccccc--
Q 010937 102 QRYSVGSKCRFRYND--GR-WYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSFLK-- 176 (497)
Q Consensus 102 ~~~~vG~kC~A~~~d--G~-~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~L~-- 176 (497)
..+.||++|...-.. |+ -|-..|.......-+=|-+..|+-++--.. +|.--| .|...||.-|+.+.++
T Consensus 4 ~~i~vG~Rv~v~~~~~~G~VryvG~v~~~~~G~wvGVelDep~GkndGsv----~G~rYF--~C~~~~G~Fvr~~~v~~g 77 (84)
T 4b6m_A 4 ETIHVGDRCLCRPGDRLGSVRFVGRVASLKPGYWVGVEFDEPVGKGDGTV----KGTRVF--QCQPNYGGFLRPDQVEVG 77 (84)
T ss_dssp -CCCTTCEEEETTTTEEEEEEEEEECTTSCSSEEEEEEESSSCCSBSSEE----TTEESS--CCCTTSEEEECGGGEEEC
T ss_pred cCcccCCEEEEcCCCeEEEEEEEecCCCCCCCEEEEEEECCCCCCcCCEE----CCEEEE--ecCCCeEEEecHHHeEEC
Confidence 357899999874211 21 233333222222235677777765543332 233223 5777899999988876
Q ss_pred ccCCCCc
Q 010937 177 KYVPTSW 183 (497)
Q Consensus 177 ~~~~pd~ 183 (497)
+|.|.+|
T Consensus 78 d~Ppe~f 84 (84)
T 4b6m_A 78 DFPPEVF 84 (84)
T ss_dssp CCCCCCC
T ss_pred CcCCCCC
Confidence 3554443
No 157
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=39.03 E-value=46 Score=29.64 Aligned_cols=29 Identities=10% Similarity=0.397 Sum_probs=22.7
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeecc
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEE 129 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~ 129 (497)
...|.+|+-|-|+...=-|+||+|+....
T Consensus 9 ~~~~~~GDlVWaKvkGyPwWPa~V~~~~~ 37 (147)
T 1khc_A 9 DKEFGIGDLVWGKIKGFSWWPAMVVSWKA 37 (147)
T ss_dssp SSSCCTTCEEEEEETTTEEEEEEEECGGG
T ss_pred CccCcCCCEEEEecCCcCCCCEEeccchh
Confidence 45799999999998422599999997654
No 158
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=38.79 E-value=1.7e+02 Score=24.31 Aligned_cols=60 Identities=15% Similarity=0.122 Sum_probs=45.6
Q ss_pred hcHHHHHHHHHHHHHHHHHHHhccC--chHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHh
Q 010937 428 AYDDEIKDLRVRVVKLEEMVNRNKN--EKAVFEAAMRKLNETRKALAQAEAAQASASHEVSS 487 (497)
Q Consensus 428 ~~~e~i~~l~~~i~kL~e~l~Rn~~--~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~ 487 (497)
+...+.++|++++.+|+..+..=.. +-+-.+.+.++++.+..+|..++.++.+-...|..
T Consensus 20 ~~a~~~~~lk~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~F~~ 81 (93)
T 3sjb_C 20 ELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQA 81 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888888888887765554 67777888888888888888888877766655543
No 159
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=44.04 E-value=6.8 Score=33.91 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=36.6
Q ss_pred CcccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeec
Q 010937 182 SWEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLG 232 (497)
Q Consensus 182 d~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~ 232 (497)
|+..|.+|..|-|||. |-|+.|.|..|+-. -.|+|.|..+.....|.
T Consensus 3 dPp~L~VGTeVSAKyr---GAFCEAkIk~V~r~-vKcKV~~k~~~~~~~v~ 49 (118)
T 2lcd_A 3 EPAYLTVGTDVSAKYR---GAFCEAKIKTVKRL-VKVKVLLKQDNTTQLVQ 49 (118)
Confidence 3457899999999986 99999999999864 55888888755444443
No 160
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=37.62 E-value=57 Score=26.68 Aligned_cols=52 Identities=15% Similarity=0.065 Sum_probs=38.4
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeCC-----CceEEEEEeCCCCceeecccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDDE-----HRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~-----~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
..+.+|..||||.+ .--|=+|+|.++.+. .+.|.|.|=.+...+-|....|.
T Consensus 4 ~~f~~GdlVwaK~~--g~p~WPa~V~~~~~~~~k~~~~~~~V~FFGt~~~awv~~~~l~ 60 (94)
T 3qby_A 4 HAFKPGDLVFAKMK--GYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLF 60 (94)
T ss_dssp CCCCTTCEEEECCT--TSCCEEEEECCCCTTSBCCCTTCEEEEETTTCCEEEECGGGEE
T ss_pred CcCccCCEEEEecC--CCCCCCEEEeecccccccCCCCEEEEEEEcCCCcceEchhHee
Confidence 46679999999954 667889999887532 25688988877777777655544
No 161
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=37.18 E-value=33 Score=30.90 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=24.6
Q ss_pred CeeEEEeCC--CceeeeEEEeec-----cCCceEEEEecC
Q 010937 108 SKCRFRYND--GRWYDGRIIGLE-----ETDSAKVSFLRP 140 (497)
Q Consensus 108 ~kC~A~~~d--G~~Y~A~I~~i~-----~~~~vrV~Fl~p 140 (497)
-++.|.|.. .-||||+.++.. +...+.|.|.--
T Consensus 10 NrVfAff~G~p~~YYPATcvg~~~~~~~~~~~y~VrFdDs 49 (153)
T 2fhd_A 10 NRVLAFFKGYPSFYYPATLVAPVHSAVTSSIMYKVQFDDA 49 (153)
T ss_dssp GEEEEECCSSSCCEEEEEEEEEECCSSCCBCEEEEEETTS
T ss_pred ceEEEEcCCCcccccceEEEccCCCcccCCeEEEEEEcCC
Confidence 468899952 249999999986 345788888764
No 162
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=37.07 E-value=30 Score=29.23 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=27.2
Q ss_pred ccCCCCCCeeEEEeCCC-ceeeeEEEeeccC------CceEEEEe
Q 010937 101 DQRYSVGSKCRFRYNDG-RWYDGRIIGLEET------DSAKVSFL 138 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG-~~Y~A~I~~i~~~------~~vrV~Fl 138 (497)
...|.+|+-|-|+.. | -|+||+|+.+... ..+-|.|.
T Consensus 17 ~~~~~~GdlVwaK~k-GyP~WPa~V~~~p~~~~k~~~~~~~V~FF 60 (110)
T 1ri0_A 17 QKEYKCGDLVFAKMK-GYPHWPARIDEMPEAAVKSTANKYQVFFF 60 (110)
T ss_dssp SSSCCTTCEEEEEET-TEEEEEEEEECCCSSSSCCCSSCEEEEET
T ss_pred cCCCCCCCEEEEEeC-CCCCCCEEEecccHhhcCCCCCEEEEEEe
Confidence 457999999999983 4 4899999876432 35666664
No 163
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=37.05 E-value=37 Score=39.28 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=38.9
Q ss_pred cCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 187 LVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 187 ~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
..|..||+. ++...|-.|+|.+.+. +.++|...++|+...|..+.|.+
T Consensus 6 ~~~~~vwv~--~~~~~~~~~~v~~~~~--~~~~v~~~~~~~~~~v~~~~~~~ 53 (995)
T 2ycu_A 6 TARRLVWVP--SELHGFEAAALRDEGE--EEAEVELAESGRRLRLPRDQIQR 53 (995)
T ss_dssp GGGCEEEEE--ETTTEEEEEEEEEECS--SEEEEEETTTCCEEEEEGGGCEE
T ss_pred cCCCeEEEE--CCCCceEEEEEEEecC--CeEEEEECCCCeEEEeeHHHccc
Confidence 457889998 5578899999998765 67899998888888887776654
No 164
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=36.64 E-value=47 Score=28.86 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=36.8
Q ss_pred CCcccccCCCeEEEeecCCCCceEeeEEeeeeCC---------CceEEEEEeCCC-Cceeecccccc
Q 010937 181 TSWEQSLVGSTIWALSDDKVGIWRKAELGSWDDE---------HRMGEVVFRDDG-SSAKLGIEAMT 237 (497)
Q Consensus 181 pd~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~---------~~~~~V~f~~~g-~~~~~~~d~~~ 237 (497)
|+-..+.+|..||||.+ .--|.+|+|.+.... .+.|.|.|=++. .-+-|+...|.
T Consensus 18 ~~~~~~~~GdlVwaK~~--g~P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg~~~~~aWv~~~~l~ 82 (134)
T 2gfu_A 18 PTSSDFSPGDLVWAKME--GYPWWPSLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLK 82 (134)
T ss_dssp CSSCCCCTTSEEEECCT--TSCCEEEECCCCSSTTCCEEESSSCEEEEEEECSSSCEEEEECGGGEE
T ss_pred CcCCCCCCCCEEEEeec--CCCCCCeeecchhhhhhhhhccCCCceEEEEECCCCCceEEECHHHcc
Confidence 34457789999999954 667999999876422 246778886553 34555544444
No 165
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=36.28 E-value=1.1e+02 Score=26.44 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHH
Q 010937 431 DEIKDLRVRVVKLEEMVNRNKN-EKAVFEAAMRKLNETRKALAQAE 475 (497)
Q Consensus 431 e~i~~l~~~i~kL~e~l~Rn~~-~~~~~~~i~~kL~~~~~~L~~~~ 475 (497)
..|..|+++|..|+..+.+=.. ....+.++...|+.+..+|+..+
T Consensus 15 ~~Ie~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~r 60 (120)
T 3i00_A 15 HLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQ 60 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888888888888877765 77788888888888888887765
No 166
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=35.78 E-value=39 Score=30.50 Aligned_cols=57 Identities=19% Similarity=0.274 Sum_probs=38.7
Q ss_pred ccCCCCCCeeEEEeCCCceeeeEEEeeccC-------CceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcc
Q 010937 101 DQRYSVGSKCRFRYNDGRWYDGRIIGLEET-------DSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLS 173 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~-------~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~ 173 (497)
...|.+|+-|-|+..-=-|.||+|+..... +.+.|.| ||++- | .-|...
T Consensus 14 g~~f~~GDLVWaKvkG~PwWPa~V~~~~~~~k~~~~~~~~~V~F--------------------FG~~~-~---awv~~~ 69 (154)
T 3llr_A 14 GRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMW--------------------FGDGK-F---SVVCVE 69 (154)
T ss_dssp SCCCCTTCEEEECCTTSCCEEEEEECGGGTTSCCCCTTEEEEEE--------------------TTTCC-E---EEEEGG
T ss_pred CCCCccCCEEEEecCCCCCCCEEEecccccccccCCCCEEEEEE--------------------eCCCC-E---EEEcHH
Confidence 467999999999984225999999987532 2344555 44331 1 357788
Q ss_pred cccccCCC
Q 010937 174 FLKKYVPT 181 (497)
Q Consensus 174 ~L~~~~~p 181 (497)
.|.+|.+-
T Consensus 70 ~L~pf~e~ 77 (154)
T 3llr_A 70 KLMPLSSF 77 (154)
T ss_dssp GEEEGGGH
T ss_pred HCcchhhh
Confidence 88888753
No 167
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=35.07 E-value=1.2e+02 Score=25.64 Aligned_cols=58 Identities=16% Similarity=0.292 Sum_probs=38.1
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhcc-CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNK-NEKAVFEAAMRKLNETRKALAQAEAAQASASH 483 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~-~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~ 483 (497)
-......++.|..++.+++.-..+-. .....++.++..|.....+|..++.+.....+
T Consensus 24 ~~e~e~~k~eL~~~~~~~~~~~~~k~~eq~~~le~lk~eL~~~~~el~~lq~~l~~~~~ 82 (107)
T 2no2_A 24 QVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQVLQGSLETSAQ 82 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667778888888774444433 37778888888888866666666665554443
No 168
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=34.59 E-value=55 Score=28.91 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=34.0
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPT 141 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt 141 (497)
....+|+.+.+.-.+|.-++++|+.|++. .|+|=|-||+
T Consensus 92 ~~~~~G~~~~~~~~~G~~~~~~V~~v~~~-~v~vD~NHPL 130 (151)
T 2kr7_A 92 IELEKGMSVFGQTEDNQTIQAIIKDFSAT-HVMVDYNHPL 130 (151)
T ss_dssp SCCCTTCEEEEEETTTEEEEEEEEEECSS-EEEEEECCTT
T ss_pred CCCccCCEEEEECCCCCEEEEEEEEECCC-EEEEECCCcC
Confidence 35789999998887898889999999887 5999999995
No 169
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=34.42 E-value=34 Score=35.18 Aligned_cols=51 Identities=10% Similarity=0.258 Sum_probs=34.9
Q ss_pred CCCCCCeeEEEeC--CCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCC
Q 010937 103 RYSVGSKCRFRYN--DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHG 167 (497)
Q Consensus 103 ~~~vG~kC~A~~~--dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg 167 (497)
.-++|++|.++.+ -..|..|.++.|-..+..|| . .||++|- .| .-|.+.|.
T Consensus 43 ~alpGe~v~~~i~~~~~~~~~~~~~~i~~~S~~Rv---~------p~C~~~~--~C---GGC~~qh~ 95 (433)
T 1uwv_A 43 GLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERE---T------PRCPHFG--VC---GGCQQQHA 95 (433)
T ss_dssp TCCTTCEEEEEEEEECSSEEEEEEEEECCCCTTBC---C------CSCTTTT--TB---TTCSCTTB
T ss_pred CCCCCCEEEEEEEeecCCceeEEeccccCCCCCcC---C------CCCCCCC--CC---CCccccCC
Confidence 3589999999976 33577899988865544555 2 3899994 33 24666675
No 170
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=33.73 E-value=1.4e+02 Score=25.95 Aligned_cols=51 Identities=12% Similarity=0.128 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHHHHHHHHHH--hccCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010937 429 YDDEIKDLRVRVVKLEEMVN--RNKNEKAVFEAAMRKLNETRKALAQAEAAQA 479 (497)
Q Consensus 429 ~~e~i~~l~~~i~kL~e~l~--Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~ 479 (497)
+..+|.+|..++.+++.-++ ..++|..++.+....++.+.++|++++.+..
T Consensus 8 ~K~Eiq~L~drLD~~~rKlaaa~~rgd~~~i~qf~~E~~~l~k~I~~lk~~q~ 60 (123)
T 2lf0_A 8 EKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHS 60 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888888887776554 4556999999999999999999999987754
No 171
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=33.11 E-value=1.5e+02 Score=26.20 Aligned_cols=31 Identities=10% Similarity=0.195 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHh
Q 010937 457 FEAAMRKLNETRKALAQAEAAQASASHEVSS 487 (497)
Q Consensus 457 ~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~ 487 (497)
+.+++.+=...|++|+.++|...+|.+-+..
T Consensus 48 VDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K 78 (167)
T 4gkw_A 48 VDQLQKRNVAHQKEIGKLRAELGTAQRNLEK 78 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHhHHH
Confidence 4556666666777777777777777665543
No 172
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=32.81 E-value=74 Score=23.95 Aligned_cols=45 Identities=22% Similarity=0.347 Sum_probs=34.3
Q ss_pred hhhhHHhhhcHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHH
Q 010937 420 KISRRDLVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKL 464 (497)
Q Consensus 420 k~~~r~l~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL 464 (497)
|+.-....++.+++..|+++..+|+..+....+-..-.+.+-+++
T Consensus 6 KSlVDtVYaLkDqV~eL~qe~k~m~k~lEeEqkARk~LE~~vrk~ 50 (56)
T 2w6b_A 6 KSLVDTVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKV 50 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555688899999999999999999988877555555555554
No 173
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=31.91 E-value=58 Score=36.65 Aligned_cols=46 Identities=13% Similarity=0.054 Sum_probs=36.4
Q ss_pred CCCeEEEeecCC---CCceEeeEEeeeeCCCceEEEEEeCCCCceeeccccccc
Q 010937 188 VGSTIWALSDDK---VGIWRKAELGSWDDEHRMGEVVFRDDGSSAKLGIEAMTL 238 (497)
Q Consensus 188 ~Gs~~la~~~~~---dglW~~a~i~~~d~~~~~~~V~f~~~g~~~~~~~d~~~~ 238 (497)
.|..||+. ++ ...|-.|+|.+.+. +.++|. .++|+...|..+.+.+
T Consensus 31 ~~~~vWv~--~~~~~~~~~~~~~v~~~~~--~~~~v~-~~~g~~~~v~~~~v~~ 79 (770)
T 1w9i_A 31 DKRYIWYN--PDPKERDSYECGEIVSETS--DSFTFK-TVDGQDRQVKKDDANQ 79 (770)
T ss_dssp -CCEEEEC--SSTTCTTCCEEEEEEEECS--SEEEEE-CTTSCEEEEETTTCEE
T ss_pred CCCEEEee--CCcccccCceEEEEEEecC--CeEEee-cCCCcEEEEchHhccc
Confidence 79999998 55 68899999999765 668888 7788888887776654
No 174
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.31 E-value=58 Score=24.38 Aligned_cols=37 Identities=11% Similarity=0.320 Sum_probs=29.7
Q ss_pred ccCCCCCCeeEEEeCCCce--eeeEEEeeccCCceEEEEecC
Q 010937 101 DQRYSVGSKCRFRYNDGRW--YDGRIIGLEETDSAKVSFLRP 140 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG~~--Y~A~I~~i~~~~~vrV~Fl~p 140 (497)
...|.+|+.++.. +|-| +.|.|+.+++. +++|+...+
T Consensus 5 ~~~f~~GD~V~V~--~Gpf~g~~G~V~evd~e-~v~V~v~~f 43 (59)
T 2e6z_A 5 SSGFQPGDNVEVC--EGELINLQGKILSVDGN-KITIMPKHE 43 (59)
T ss_dssp CSSCCTTSEEEEC--SSTTTTCEEEECCCBTT-EEEEEECCS
T ss_pred cccCCCCCEEEEe--ecCCCCCEEEEEEEeCC-EEEEEEEec
Confidence 4568999999876 6765 89999999986 788888653
No 175
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=30.20 E-value=1.3e+02 Score=35.03 Aligned_cols=63 Identities=11% Similarity=0.207 Sum_probs=40.7
Q ss_pred hcHHHHHHHHHHHHHHHHHHHhccCchH--------HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhHHh
Q 010937 428 AYDDEIKDLRVRVVKLEEMVNRNKNEKA--------VFEAAMRKLNETRKALAQAEAAQASASHEVSSREK 490 (497)
Q Consensus 428 ~~~e~i~~l~~~i~kL~e~l~Rn~~~~~--------~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~~~~ 490 (497)
....+|++|+.++..|++.+.+-.+++. .-..++++++.++++++.|+.+...+...+..+++
T Consensus 981 ~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~~~~~~~~~ 1051 (1080)
T 2dfs_A 981 NATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAK 1051 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566666666666666655443222 23566788888888888888888888865555543
No 176
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=29.12 E-value=1.9e+02 Score=22.95 Aligned_cols=25 Identities=4% Similarity=0.036 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhH
Q 010937 457 FEAAMRKLNETRKALAQAEAAQASA 481 (497)
Q Consensus 457 ~~~i~~kL~~~~~~L~~~~a~~~si 481 (497)
+..++.+|.....+|+++++.....
T Consensus 28 ~~~~q~~i~~lE~eL~~~r~e~~~q 52 (84)
T 1gk4_A 28 AANYQDTIGRLQDEIQNMKEEMARH 52 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444554444444333
No 177
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=29.06 E-value=64 Score=28.86 Aligned_cols=39 Identities=15% Similarity=0.195 Sum_probs=33.9
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPT 141 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt 141 (497)
..+.+|+.+.+.-.+|.-++++|+.+.+. .|.|-|-||+
T Consensus 83 ~~~~~G~~~~~~~~~G~~~~~~V~~v~~~-~v~vD~NHPL 121 (158)
T 3cgm_A 83 AEVVPGAQFYAQDMEGNPMPLTVVAVEGE-EVTVDFNHPL 121 (158)
T ss_dssp SCCCTTCEEEEEETTTEEEEEEEEEEETT-EEEEECSCTT
T ss_pred CCCccCCEEEEECCCCCEEEEEEEEECCC-EEEEeCCccc
Confidence 46899999998877898899999999887 5999999984
No 178
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=28.92 E-value=2.4e+02 Score=24.02 Aligned_cols=58 Identities=21% Similarity=0.287 Sum_probs=27.8
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 010937 427 VAYDDEIKDLRVRVVKLEEMVNRNKN-EKAVFEAAMRKLNETRKALAQAEAAQASASHE 484 (497)
Q Consensus 427 ~~~~e~i~~l~~~i~kL~e~l~Rn~~-~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~ 484 (497)
-..+-+|..++.....|+..|+--.. ....+..++.+|..+..+|++++.......++
T Consensus 46 q~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e~~~ql~E 104 (129)
T 3tnu_B 46 QRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLRE 104 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 33344444444444444444432221 23334555566666666666666655544443
No 179
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=28.86 E-value=59 Score=28.72 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Q 010937 15 QQLNEQRDSLTALNDAVASDPFNPELQEVLKELVQAIK 52 (497)
Q Consensus 15 ~~L~~Yk~QLqQVe~aL~~DP~n~ELl~Lk~DL~elI~ 52 (497)
..|..|..-+.-|+.+|..+|+|..-+.|+.-+..-|.
T Consensus 89 yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ki~ 126 (134)
T 3o48_A 89 YKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQ 126 (134)
T ss_dssp HHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 35677889999999999999999999998887777764
No 180
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=28.57 E-value=1.2e+02 Score=31.02 Aligned_cols=51 Identities=22% Similarity=0.345 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010937 430 DDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQAS 480 (497)
Q Consensus 430 ~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~s 480 (497)
++-++.++.++.++=..+..+..-..+..-|+++|.++|+-+.+++++-.+
T Consensus 372 eeal~~~~~~i~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (471)
T 3mq9_A 372 DEALKDAQTRITAARDGLRAVMEARNVTHLLQQELTEAQKGFQDVEAQAAT 422 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHhhhHHHHHHHhhh
Confidence 455555665555555555555556677778888888888888888877443
No 181
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=28.32 E-value=40 Score=29.92 Aligned_cols=27 Identities=11% Similarity=0.244 Sum_probs=22.3
Q ss_pred ccCCCCCCeeEEEeCCC-ceeeeEEEeec
Q 010937 101 DQRYSVGSKCRFRYNDG-RWYDGRIIGLE 128 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~dG-~~Y~A~I~~i~ 128 (497)
...|.+|+-|-|+.. | -|.||+|+...
T Consensus 20 ~~~f~~GdlVwaK~~-g~p~WPa~V~~~~ 47 (153)
T 4fu6_A 20 TRDFKPGDLIFAKMK-GYPHWPARVDEVP 47 (153)
T ss_dssp GGGCCTTCEEEECCT-TSCCEEEEECCCC
T ss_pred ccCCCCCCEEEEeCC-CCCCCCEEEeEch
Confidence 567999999999984 4 58999998764
No 182
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=28.31 E-value=1.3e+02 Score=26.19 Aligned_cols=32 Identities=22% Similarity=0.163 Sum_probs=24.4
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhhhhhhHH
Q 010937 33 SDPFNPELQEVLKELVQAIKDAEEGLFHLKRA 64 (497)
Q Consensus 33 ~DP~n~ELl~Lk~DL~elI~LTee~L~~lk~s 64 (497)
..|+++||..++.||...|.-.+..|..|.++
T Consensus 58 ~~~s~~E~~~~~~EL~~~l~sie~dLeDLe~s 89 (130)
T 4dnd_A 58 AAVGREELDWTTNELRNGLRSIEWDLEDLEET 89 (130)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999887765
No 183
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=28.28 E-value=2.4e+02 Score=29.39 Aligned_cols=120 Identities=10% Similarity=0.027 Sum_probs=70.2
Q ss_pred cCCCCCCeeEEEeCC--CceeeeEEEeeccCCceEEEEecCCCccc-cch---hhhh--hccccCCCccccC--------
Q 010937 102 QRYSVGSKCRFRYND--GRWYDGRIIGLEETDSAKVSFLRPTSENM-LMC---KFFL--QQRCRFGTNCRLS-------- 165 (497)
Q Consensus 102 ~~~~vG~kC~A~~~d--G~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~-~pC---~~fl--~g~C~f~~~Cr~s-------- 165 (497)
..|.+|||..+.-.+ ..+..|+|+.+-| .++++.|...-.... -=| ..++ -|+|.-.. +.+.
T Consensus 154 ~~F~~GmkLEv~d~~~~~~~~vAtV~~v~G-~rl~Lry~g~~d~~~dFW~~~~S~~IhPvGWc~~~g-~~L~pP~~~~~~ 231 (437)
T 3feo_A 154 YPFKPCMRVEVVDKRHLCRTRVAVVESVIG-GRLRLVYEESEDRTDDFWCHMHSPLIHHIGWSRSIG-HRFKRSDITKKQ 231 (437)
T ss_dssp CSCCTTEEEEEEETTEEEEEEEEEEEEEET-TEEEEEESSCSSTTCEEEEETTCTTEECTTHHHHHT-CCBC--------
T ss_pred CCCCCCCEEEEecCCCCcceEEEEEEEEEC-CEEEEEEeCCCCCCCCeEEeCCCCCccccchHHhcC-CcccCchhhhhc
Confidence 359999999998753 3467999998876 478888877521100 001 1111 15554321 1110
Q ss_pred CC-cccCcccccccCCCC--cccccCCCeEEEeecCCCCceEeeEEeeeeCCCceEEEEEeC
Q 010937 166 HG-IDVPLSFLKKYVPTS--WEQSLVGSTIWALSDDKVGIWRKAELGSWDDEHRMGEVVFRD 224 (497)
Q Consensus 166 Hg-~~v~~~~L~~~~~pd--~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~~~~~~~V~f~~ 224 (497)
.| ...|.+-++....++ -..+++|+..=|....+..+-+.|+|.+|-. .++..|.|++
T Consensus 232 ~ga~~aP~~lF~~~~~~~~~~~~F~~GMKLEavDp~~p~~icvATV~~v~~-~g~l~l~~Dg 292 (437)
T 3feo_A 232 DGHFDTPPHLFAKVKEVDQSGEWFKEGMKLEAIDPLNLSTICVATIRKVLA-DGFLMIGIDG 292 (437)
T ss_dssp -CCEECCGGGSCCCCCCCCSSSCCCTTCEEEEEETTEEEEEEEEEEEEECG-GGEEEEEETT
T ss_pred ccccCCCHHHhccccccCCCccccccCCEEEEEcCCCCceEEEEEEEEEcc-CCEEEEEeCC
Confidence 01 122333333322222 2448999999998765667889999999973 2566787764
No 184
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=28.15 E-value=40 Score=34.87 Aligned_cols=51 Identities=20% Similarity=0.215 Sum_probs=27.3
Q ss_pred CCCCCCeeEEEeC--CCceeeeEEEeeccCCceEEEEecCCCccccchhhhhhccccCCCccccCCC
Q 010937 103 RYSVGSKCRFRYN--DGRWYDGRIIGLEETDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHG 167 (497)
Q Consensus 103 ~~~vG~kC~A~~~--dG~~Y~A~I~~i~~~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg 167 (497)
.-++|++|.++.. -..|..|.++.|-..+..|| . .||++|-. | .-|-+.|.
T Consensus 43 ~alPGe~v~~~i~~~k~~~~~a~~~~v~~~S~~Rv---~------p~C~~~~~--C---GGC~lqh~ 95 (425)
T 2jjq_A 43 FSAPGDEIIVERVERVKKRRVASQWKLVRSSPLRV---G------PRCKAFGK--C---GGCTLQHL 95 (425)
T ss_dssp TCCTTCEEEEEEEEESSSSEEEEEEEEEECCTTBC---C----------------------CTTTTB
T ss_pred CCCCCCEEEEEEEEecCCceEEEEcccCCCCcccc---C------CCCCCcCC--C---CCccCcCC
Confidence 3589999999986 33577899988755444554 2 38999943 2 14555574
No 185
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=26.87 E-value=58 Score=28.35 Aligned_cols=41 Identities=10% Similarity=0.104 Sum_probs=32.9
Q ss_pred ccCCCCCCeeEEEeC-C-CceeeeEEEeeccCCceEEEEecCCC
Q 010937 101 DQRYSVGSKCRFRYN-D-GRWYDGRIIGLEETDSAKVSFLRPTS 142 (497)
Q Consensus 101 ~~~~~vG~kC~A~~~-d-G~~Y~A~I~~i~~~~~vrV~Fl~pt~ 142 (497)
...|.+|||+.|.-. + ..+..|+|+.+.|. .++|-|.++-.
T Consensus 9 ~~~f~~GmKLEa~D~~~p~~~~vAtV~~v~g~-rl~l~~dG~~~ 51 (127)
T 1wjr_A 9 IDLITVGSLIELQDSQNPFQYWIVSVIENVGG-RLRLRYVGLED 51 (127)
T ss_dssp HHHCCTTCEEEEECSSCSSCEEEEECCCEETT-EEEECBTTCSS
T ss_pred hhhccCCCEeEEecCCCCCcEEEEEEeeeeCC-EEEEEecCCCC
Confidence 356999999999975 2 45789999999874 78888888754
No 186
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=26.85 E-value=51 Score=29.49 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Q 010937 16 QLNEQRDSLTALNDAVASDPFNPELQEVLKELVQAI 51 (497)
Q Consensus 16 ~L~~Yk~QLqQVe~aL~~DP~n~ELl~Lk~DL~elI 51 (497)
.|.+|..-+.=|+.+|..+|+|..-+.|+.-+..-|
T Consensus 89 kl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~~i 124 (144)
T 1y8m_A 89 KLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKI 124 (144)
T ss_dssp TTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 466788999999999999999999888888777665
No 187
>3pie_A 5'->3' exoribonuclease (XRN1); beta berrel, tudor domain, chromo domain, mRNA turnover, RRN processing, RNA binding, DNA binding; 2.90A {Kluyveromyces lactis} PDB: 3pif_A
Probab=26.70 E-value=69 Score=37.66 Aligned_cols=73 Identities=21% Similarity=0.415 Sum_probs=58.3
Q ss_pred cccCCCCCCeeEEEeCCCc---eeeeEEEeeccCC---ceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCcc
Q 010937 100 EDQRYSVGSKCRFRYNDGR---WYDGRIIGLEETD---SAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLS 173 (497)
Q Consensus 100 ~~~~~~vG~kC~A~~~dG~---~Y~A~I~~i~~~~---~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~ 173 (497)
..+.|..||+|.-.-..|+ .--++|+||...+ .+-|+|..| |+-| -.+|.+|+--.|..|+.+
T Consensus 1062 ~~Q~F~LGDRVv~VqdsG~VPl~~kGTVVGi~~~~~~~~ldVvFD~~----------F~~G-~tlggrcs~~RG~~v~~s 1130 (1155)
T 3pie_A 1062 RSQRFHLGDRVMYIQDSGKVPLHSKGTVVGYTSIGKNVSIQVLFDNE----------IIAG-NNFGGRLQTRRGLGLDSS 1130 (1155)
T ss_pred cCCcccCCCeEEEecCCCCCccccceEEEEEecCCCceEEEEEeccC----------ccCC-CcccccccccccccccHH
Confidence 3678999999997776775 4689999998643 589999998 4544 457889998899999999
Q ss_pred cccccCCCCc
Q 010937 174 FLKKYVPTSW 183 (497)
Q Consensus 174 ~L~~~~~pd~ 183 (497)
.|-....+-|
T Consensus 1131 ~lLNlT~~Q~ 1140 (1155)
T 3pie_A 1131 FLLNLSDRQL 1140 (1155)
T ss_pred HeEEcCCCce
Confidence 9988776643
No 188
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=26.53 E-value=1e+02 Score=27.68 Aligned_cols=52 Identities=17% Similarity=0.256 Sum_probs=38.8
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEeeeeC------CCceEEEEEeCCCCceeecccccc
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGSWDD------EHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~~d~------~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
..+.+|..||||-+ .--|-+|+|.++.. ..+.|.|.|=.+...+-|..+.|.
T Consensus 15 ~~f~~GDLVWaKvk--G~PwWPa~V~~~~~~~k~~~~~~~~~V~FFG~~~~awv~~~~L~ 72 (154)
T 3llr_A 15 RGFGIGELVWGKLR--GFSWWPGRIVSWWMTGRSRAAEGTRWVMWFGDGKFSVVCVEKLM 72 (154)
T ss_dssp CCCCTTCEEEECCT--TSCCEEEEEECGGGTTSCCCCTTEEEEEETTTCCEEEEEGGGEE
T ss_pred CCCccCCEEEEecC--CCCCCCEEEecccccccccCCCCEEEEEEeCCCCEEEEcHHHCc
Confidence 45679999999954 77799999998752 235788999887777777555444
No 189
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=26.37 E-value=2.7e+02 Score=23.81 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=30.2
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKN-EKAVFEAAMRKLNETRKALAQAEAAQASASHE 484 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~-~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~ 484 (497)
+-..+-+|..++.....|+..|+--.. ...-+..++.+|..+..+|++++.......++
T Consensus 47 iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~em~~ql~E 106 (131)
T 3tnu_A 47 MQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQE 106 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444433222 33344556666666666666666665554444
No 190
>2pms_C Pneumococcal surface protein A (PSPA); lactoferrin, protein-protein metal transport, hydrolase; HET: NAG; 2.91A {Streptococcus pneumoniae} SCOP: h.4.19.1
Probab=26.29 E-value=1.6e+02 Score=25.70 Aligned_cols=58 Identities=22% Similarity=0.342 Sum_probs=45.3
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccC----chHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKN----EKAVFEAAMRKLNETRKALAQAEAAQASASH 483 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~----~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~ 483 (497)
|-..+++|..|+.+|.+|+.-+.+-.. +....+.|...|...+.+|...++.+..+.|
T Consensus 63 leeL~~ki~eL~~kvA~le~e~~~~e~~~~~~~~~~e~le~~la~KkAEleKtqa~Ld~aln 124 (125)
T 2pms_C 63 LEELSDKIDELDAEIAKLEDQLKAAEENNNVEDYFKEGLEKTIAAKKAELEKTEADLKKAVN 124 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456778899999999999998886332 4466789999999999999888777766544
No 191
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=26.28 E-value=44 Score=26.38 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=0.0
Q ss_pred ccCCCeEEEeecCCCCceEe--eEEeeeeCCCce----EEEEEe
Q 010937 186 SLVGSTIWALSDDKVGIWRK--AELGSWDDEHRM----GEVVFR 223 (497)
Q Consensus 186 l~~Gs~~la~~~~~dglW~~--a~i~~~d~~~~~----~~V~f~ 223 (497)
|..||.|..+ -+...||. +.|.+||. .. +.|.|+
T Consensus 2 i~rGs~VrIl--r~eSywy~~vG~V~~Vd~--~~~~ypV~VrFe 41 (70)
T 1qp2_A 2 VQRGSKVRIL--RPESYWFQDVGTVASVDQ--SGIKYPVIVRFE 41 (70)
T ss_dssp CCTTCEEEEC--CTTSTTTTCEEEEEEECC--SSCSCSEEEECS
T ss_pred cCCCCEEEEc--CccceeecceeEEEEEeC--CCcEeeEEEEec
No 192
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=26.03 E-value=2.6e+02 Score=22.61 Aligned_cols=56 Identities=21% Similarity=0.265 Sum_probs=40.3
Q ss_pred cHHHHHHHHHHHHHHHHHH--HhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 010937 429 YDDEIKDLRVRVVKLEEMV--NRNKNEKAVFEAAMRKLNETRKALAQAEAAQASASHE 484 (497)
Q Consensus 429 ~~e~i~~l~~~i~kL~e~l--~Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~ 484 (497)
.+++|...+-=|.-|.+.| +++.+...-+++-.+.|..++..|+.+.-+.+-+.++
T Consensus 27 lrq~I~DKQ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAraDL~~l~r~~av~g~E 84 (90)
T 4b6x_A 27 LRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFAVLRNE 84 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3455655555566665554 4677788888888888999998888888777666554
No 193
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=25.73 E-value=72 Score=27.30 Aligned_cols=42 Identities=12% Similarity=0.037 Sum_probs=29.5
Q ss_pred cccCCCeEEEeecCC----CCceEeeEEeeeeC---CC----ceEEEEEeCCCCc
Q 010937 185 QSLVGSTIWALSDDK----VGIWRKAELGSWDD---EH----RMGEVVFRDDGSS 228 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~----dglW~~a~i~~~d~---~~----~~~~V~f~~~g~~ 228 (497)
...+|..||+- |+ ..|+|.|.|++|.. +. ..|.|-|.+=.+.
T Consensus 19 ~F~~gEkVLc~--h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~~ 71 (110)
T 3oa6_A 19 KFHSGEKVLCF--EPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRS 71 (110)
T ss_dssp CSCTTCEEEEE--CSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGG
T ss_pred ccCCCCEEEEE--ecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEECCcCcc
Confidence 45689999984 43 35899999998842 11 1488999875443
No 194
>2gd5_A Charged multivesicular BODY protein 3; CHMP3, ESCRT-III, protein transport; 2.80A {Homo sapiens} PDB: 3frv_A
Probab=25.70 E-value=2.6e+02 Score=25.11 Aligned_cols=68 Identities=19% Similarity=0.250 Sum_probs=36.5
Q ss_pred hhhhHHhhhcHHHHHHHHHHHHHHHHHHHhcc--CchHHHHHHHHHHHHHHHHH---HHHHHHHHhHHHHHHh
Q 010937 420 KISRRDLVAYDDEIKDLRVRVVKLEEMVNRNK--NEKAVFEAAMRKLNETRKAL---AQAEAAQASASHEVSS 487 (497)
Q Consensus 420 k~~~r~l~~~~e~i~~l~~~i~kL~e~l~Rn~--~~~~~~~~i~~kL~~~~~~L---~~~~a~~~si~~~~~~ 487 (497)
...+++.++++-+|..|+++-.+++..|..-. ++...+..+...|-..|++. ....+++.++.-.++.
T Consensus 17 ~~L~~~~r~Ldr~~~kle~~ekk~~~~Ikka~k~g~~~~aki~Ak~lvr~rk~~~~l~~~~a~l~~v~~~lqt 89 (179)
T 2gd5_A 17 LKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKN 89 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444456666677777777666666554333 45555555555555544443 3444555555544443
No 195
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=25.65 E-value=1e+02 Score=25.81 Aligned_cols=43 Identities=21% Similarity=0.187 Sum_probs=29.8
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHH
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETR 468 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL~~~~ 468 (497)
.-...++|++|.++|.+|+....+-+.=+.-+..|...|+.-.
T Consensus 49 ~~eL~~EI~~L~~eI~~LE~iqs~aK~LRnKA~~L~~eLe~F~ 91 (96)
T 1t3j_A 49 QKHLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENFS 91 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3566888999999999988877665555555555666555443
No 196
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=25.26 E-value=53 Score=28.57 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Q 010937 15 QQLNEQRDSLTALNDAVASDPFNPELQEVLKELVQAI 51 (497)
Q Consensus 15 ~~L~~Yk~QLqQVe~aL~~DP~n~ELl~Lk~DL~elI 51 (497)
..|.+|..-+.-|+.+|..+|+|..-+.|+.-+..-|
T Consensus 85 yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 85 YRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 3566788899999999999999999888888776655
No 197
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=25.26 E-value=1.1e+02 Score=23.67 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=28.9
Q ss_pred ccCCCeEEEeecCCCCceE--eeEEeeeeCCCceEEEEEeC
Q 010937 186 SLVGSTIWALSDDKVGIWR--KAELGSWDDEHRMGEVVFRD 224 (497)
Q Consensus 186 l~~Gs~~la~~~~~dglW~--~a~i~~~d~~~~~~~V~f~~ 224 (497)
|.+|+.|.+++ ++.+|| .+.|..|.+ +...|.|+.
T Consensus 2 ilPG~~V~V~n--p~~~Yy~y~G~VQRvsd--gkaaVLFEG 38 (66)
T 2jz2_A 2 IFPGATVRVTN--VDDTYYRFEGLVQRVSD--GKAAVLFEN 38 (66)
T ss_dssp CCTTCEEEECC--TTSTTBTCEEEEEEEET--TEEEEEEES
T ss_pred ccCCCEEEEeC--CCCcccceeEEEEEecC--CcEEEEecC
Confidence 67899999984 466664 688999998 778999997
No 198
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=25.12 E-value=63 Score=26.43 Aligned_cols=39 Identities=26% Similarity=0.390 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHH-HHHHHHHHHH
Q 010937 11 NQLEQQLNEQRDSLTALNDAVASDPFNPE-LQEVLKELVQ 49 (497)
Q Consensus 11 ~~Le~~L~~Yk~QLqQVe~aL~~DP~n~E-Ll~Lk~DL~e 49 (497)
..++..-.++..+|.....+|..+|+|+- |..++.-|.+
T Consensus 17 ~~f~~ga~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~e 56 (85)
T 2ca5_A 17 ETFDDGTQTLQGELTLALDKLAKNPSNPQLLAEYQSKLSE 56 (85)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 35566677888899999999999999975 5555554443
No 199
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=24.88 E-value=2.9e+02 Score=23.52 Aligned_cols=66 Identities=21% Similarity=0.291 Sum_probs=40.3
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccCchHHHH--------HHHHHHHHHHHHHHHHHHHHHhHHHHHHhHHhh
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFE--------AAMRKLNETRKALAQAEAAQASASHEVSSREKE 491 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~--------~i~~kL~~~~~~L~~~~a~~~si~~~~~~~~~~ 491 (497)
+....++|..+++.|..|+-.|..-.+.....+ .-...+...+..|..+++.+..+..++...-.|
T Consensus 31 l~~~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e~~~ql~E 104 (129)
T 3tnu_B 31 LRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLRE 104 (129)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 566777888888888888777765554333322 123345566677777777777777776665443
No 200
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=24.69 E-value=2.7e+02 Score=22.23 Aligned_cols=49 Identities=37% Similarity=0.462 Sum_probs=33.8
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhccCCC----C-HHHHHHHHHHHHHHHHHHH
Q 010937 6 ERVLENQLEQQLNEQRDSLTALNDAVASDPF----N-PELQEVLKELVQAIKDAEE 56 (497)
Q Consensus 6 ~~~iE~~Le~~L~~Yk~QLqQVe~aL~~DP~----n-~ELl~Lk~DL~elI~LTee 56 (497)
-..++ .|+..|.....++..+++.|. ||+ + ..+..|..+|.++-...++
T Consensus 21 qrEle-~le~~Ie~LE~~i~~le~~la-dp~~y~~d~~~~~~l~~~l~~~e~eLe~ 74 (89)
T 2lw1_A 21 QRELE-QLPQLLEDLEAKLEALQTQVA-DASFFSQPHEQTQKVLADMAAAEQELEQ 74 (89)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHH-STTGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHh-CcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 44577 888999999999999998885 343 2 3466666666665544433
No 201
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=24.23 E-value=93 Score=24.13 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=28.4
Q ss_pred CCCCCeeEEEeCCCcee--eeEEEeeccCCceEEEEec
Q 010937 104 YSVGSKCRFRYNDGRWY--DGRIIGLEETDSAKVSFLR 139 (497)
Q Consensus 104 ~~vG~kC~A~~~dG~~Y--~A~I~~i~~~~~vrV~Fl~ 139 (497)
+++|+.+...-.+..|| .+.|.-|+++ .+.|+|.+
T Consensus 2 ilPG~~V~V~np~~~Yy~y~G~VQRvsdg-kaaVLFEG 38 (66)
T 2jz2_A 2 IFPGATVRVTNVDDTYYRFEGLVQRVSDG-KAAVLFEN 38 (66)
T ss_dssp CCTTCEEEECCTTSTTBTCEEEEEEEETT-EEEEEEES
T ss_pred ccCCCEEEEeCCCCcccceeEEEEEecCC-cEEEEecC
Confidence 57899999887665774 8999888876 68999987
No 202
>1whm_A Cylindromatosis tumor suppressor CYLD; deubiquitinating enzyme, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.10.1
Probab=24.11 E-value=67 Score=26.65 Aligned_cols=68 Identities=7% Similarity=0.027 Sum_probs=41.0
Q ss_pred cCCCCCCeeEEEeCCCceeeeEE--Eeec----c-CCceEEEEecCCCccccchhhhhhccccCCCccccCCCcccCccc
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRI--IGLE----E-TDSAKVSFLRPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSF 174 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I--~~i~----~-~~~vrV~Fl~pt~~~~~pC~~fl~g~C~f~~~Cr~sHg~~v~~~~ 174 (497)
..+.||++|+..-.++ -..++| ++.. . .-=|=|-|..|+-++-=.- .|+ ||-+.|++-||.-|++..
T Consensus 8 ~~i~VG~Rc~V~~~~~-~rrGtVrfvG~~~~~~~~G~wVGVelDEP~GknDGsv----~G~-ryF~~c~~~~g~fV~~~d 81 (92)
T 1whm_A 8 PPLEINSRVSLKVGET-IESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRF----DGV-QLCSFACVESTILLHIND 81 (92)
T ss_dssp CSSCTTCEEEEEETTE-EEEEEEEEEECCTTCTTTCCEEEEEESSSCCCCCSEE----TTE-ESCSSCCTTTEEEEEGGG
T ss_pred cCccccCeEEEcCCCc-eeeEEEEEEecCCCcCCCCeEEEEEcCCCCCCCCCeE----CCE-EeccccCCCcceEccccc
Confidence 4589999999875332 233333 2221 1 1236788888875543221 222 233388888999999888
Q ss_pred c
Q 010937 175 L 175 (497)
Q Consensus 175 L 175 (497)
+
T Consensus 82 ~ 82 (92)
T 1whm_A 82 I 82 (92)
T ss_dssp E
T ss_pred C
Confidence 7
No 203
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=23.97 E-value=1.3e+02 Score=24.86 Aligned_cols=51 Identities=12% Similarity=0.012 Sum_probs=35.0
Q ss_pred cccCCCeEEEeecCCCCceEeeEEeeeeC----------CCceEEEEEeCCCCceeecccccc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGSWDD----------EHRMGEVVFRDDGSSAKLGIEAMT 237 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~~d~----------~~~~~~V~f~~~g~~~~~~~d~~~ 237 (497)
.+.+|..||||.+ .--|.+|+|.+.+. ..+.|-|.|=+...-+-|+...|.
T Consensus 8 ~~~~GdlVwaK~~--g~p~WPa~V~~~~~~p~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~ 68 (110)
T 2daq_A 8 KLHYKQIVWVKLG--NYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVF 68 (110)
T ss_dssp SCCSSEEEEEECS--SSCEEEEEECCTTTSCHHHHTSCCCSSCEEEEETTTTEEEEECSSSSE
T ss_pred CCCCCCEEEEEeC--CCCCCceeeCChhhCCHHHhhccCCCCcEEEEEecCCCEEEEcHHHCc
Confidence 4468999999964 66799999986631 124688888766555556544444
No 204
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=23.60 E-value=2.5e+02 Score=26.14 Aligned_cols=56 Identities=14% Similarity=0.079 Sum_probs=27.4
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKN-EKAVFEAAMRKLNETRKALAQAEAAQASA 481 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~-~~~~~~~i~~kL~~~~~~L~~~~a~~~si 481 (497)
+.....++.+|..++..++.-+..... ....+..++..|..++.....++.....|
T Consensus 58 ~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ireL 114 (189)
T 2v71_A 58 NRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVREL 114 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556666666666666655544443 23334444444444444444444443333
No 205
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=23.58 E-value=2.2e+02 Score=22.57 Aligned_cols=26 Identities=15% Similarity=0.249 Sum_probs=13.6
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhcc
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNK 451 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~ 451 (497)
+-..+.+|.=...-|+.|++.++++.
T Consensus 16 i~~LE~klAfqE~tIeeLn~~v~~Qq 41 (78)
T 3efg_A 16 LVELETRLSFQEQALTELSEALADAR 41 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555544
No 206
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=23.52 E-value=1.9e+02 Score=30.26 Aligned_cols=26 Identities=27% Similarity=0.184 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHh
Q 010937 462 RKLNETRKALAQAEAAQASASHEVSS 487 (497)
Q Consensus 462 ~kL~~~~~~L~~~~a~~~si~~~~~~ 487 (497)
.++.+.++++...+.+...+.++.+.
T Consensus 544 ~~~~~le~~~~~~~~~~~~l~~e~~~ 569 (597)
T 3oja_B 544 QENIALEKQLDNKRAKQAELRQETSL 569 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhhhhhHHHHHHHHHHH
Confidence 33334444444444444444444333
No 207
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=23.45 E-value=1e+02 Score=22.02 Aligned_cols=30 Identities=20% Similarity=0.401 Sum_probs=20.4
Q ss_pred hhhhhhHHhhhcHHHHHHHHHHHHHHHHHHH
Q 010937 418 EKKISRRDLVAYDDEIKDLRVRVVKLEEMVN 448 (497)
Q Consensus 418 ~~k~~~r~l~~~~e~i~~l~~~i~kL~e~l~ 448 (497)
+.+.|+- +-+++++|..++.+...|+++..
T Consensus 11 I~kVdrE-I~Kte~kI~~lqkKlkeLee~a~ 40 (42)
T 2l5g_B 11 MDRVDRE-ITMVEQQISKLKKKQQQLEEEAA 40 (42)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHhhc
Confidence 4455554 67777778877777777777653
No 208
>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B
Probab=23.13 E-value=2.5e+02 Score=21.70 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=37.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcc----CchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhH
Q 010937 429 YDDEIKDLRVRVVKLEEMVNRNK----NEKAVFEAAMRKLNETRKALAQAEAAQASASHEVSSR 488 (497)
Q Consensus 429 ~~e~i~~l~~~i~kL~e~l~Rn~----~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~~ 488 (497)
-.++|.++++.|..|.+....=. .+-.++..|..-+..+..-...+..++....+.+.+.
T Consensus 8 R~~ei~~ie~~i~eL~~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~kA~~~q~~~ 71 (77)
T 1jth_B 8 RHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKA 71 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 46677788888877777644332 1455667777777777777777777666666655443
No 209
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=22.81 E-value=94 Score=27.32 Aligned_cols=25 Identities=12% Similarity=-0.144 Sum_probs=20.1
Q ss_pred ccccCCCeEEEeecCCCCceEeeEEee
Q 010937 184 EQSLVGSTIWALSDDKVGIWRKAELGS 210 (497)
Q Consensus 184 ~~l~~Gs~~la~~~~~dglW~~a~i~~ 210 (497)
..+.+|..||||.. .-=||+|.|.+
T Consensus 4 ~~~~~~dlVWAK~~--gyP~wPa~Iid 28 (130)
T 3l42_A 4 SPLDALDLVWAKCR--GYPSYPALIID 28 (130)
T ss_dssp SSSCTTCEEEECCT--TSCCEEEEEEC
T ss_pred ccCCCCCEEEEecc--cCCCCCEEEcC
Confidence 45778999999964 55699999965
No 210
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=22.72 E-value=1e+02 Score=34.81 Aligned_cols=46 Identities=15% Similarity=0.362 Sum_probs=34.0
Q ss_pred cccCCCeEEEeecCCCCceEeeEEee-eeCCCceEEEEEeCCCCceeecc
Q 010937 185 QSLVGSTIWALSDDKVGIWRKAELGS-WDDEHRMGEVVFRDDGSSAKLGI 233 (497)
Q Consensus 185 ~l~~Gs~~la~~~~~dglW~~a~i~~-~d~~~~~~~V~f~~~g~~~~~~~ 233 (497)
....|..||+. ++.+.|-.|+|.+ +..+.+.++|..++ |+...|..
T Consensus 6 ~~~~g~~vwv~--~~~~~~~~~~v~~~~~~~~~~~~v~~~~-g~~~~v~~ 52 (795)
T 1w7j_A 6 LYTKYARVWIP--DPEEVWKSAELLKDYKPGDKVLQLRLEE-GKDLEYCL 52 (795)
T ss_dssp GCCTTCEEEEE--ETTTEEEEEEESSCCCTTCSEEEEECSS-SSEEEEEC
T ss_pred hcccCCEEEEE--CCCCceEEEEEEeeccCCCceEEEEECC-CCEEEEec
Confidence 35679999998 6689999999986 33344567887765 77776654
No 211
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=22.52 E-value=1.3e+02 Score=27.35 Aligned_cols=26 Identities=12% Similarity=-0.170 Sum_probs=20.8
Q ss_pred cccccCCCeEEEeecCCCCceEeeEEee
Q 010937 183 WEQSLVGSTIWALSDDKVGIWRKAELGS 210 (497)
Q Consensus 183 ~~~l~~Gs~~la~~~~~dglW~~a~i~~ 210 (497)
...+.+|..||||.. .==|++|.|.+
T Consensus 34 ~~~~~pgdlVWAK~~--GyPwwPa~Iid 59 (158)
T 3pfs_A 34 RGDLEPLELVWAKCR--GYPSYPALIID 59 (158)
T ss_dssp CSCCCTTCEEEEECT--TSCEEEEEEEC
T ss_pred CCCCCCCCEEEEecC--CCCCCCEEEcC
Confidence 345779999999964 56699999965
No 212
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=22.48 E-value=1e+02 Score=28.03 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=33.7
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccCCceEEEEecCC
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEETDSAKVSFLRPT 141 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~~~vrV~Fl~pt 141 (497)
....+|+...+.-.+|.-++++|+.|++. .|+|=|-||+
T Consensus 111 ~~~~~G~~~~~~~~~G~~~~~~V~~v~~~-~V~vD~NHPL 149 (169)
T 4dt4_A 111 GEPEIGAIMLFTAMDGSEMPGVIREINGD-SITVDFNHPL 149 (169)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEEEEETT-EEEEECSCTT
T ss_pred CCCCCCcEEEEECCCCCEEEEEEEEEcCC-EEEEeCCCcc
Confidence 34689999998877899999999999887 6999999994
No 213
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=22.40 E-value=75 Score=27.48 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=22.0
Q ss_pred CCCCCCeeEEEeCC--CceeeeEEEeeccCCce
Q 010937 103 RYSVGSKCRFRYND--GRWYDGRIIGLEETDSA 133 (497)
Q Consensus 103 ~~~vG~kC~A~~~d--G~~Y~A~I~~i~~~~~v 133 (497)
.+.+|--|..-..+ +.||||.|++-....++
T Consensus 10 de~lGkVV~V~~~~kk~~WfPALVVsPs~~d~v 42 (117)
T 2yrv_A 10 DELLGKVVSVVSATERTEWYPALVISPSCNDDI 42 (117)
T ss_dssp CSSTTSEEEEECSSCSSCEEEEEEECCSSCSSC
T ss_pred HHHcCcEEEEecCCCCCceeeeEEECCCCCCCe
Confidence 45789888876653 46999999976554444
No 214
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=22.39 E-value=2.2e+02 Score=27.19 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=34.7
Q ss_pred hhhcHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhHH
Q 010937 426 LVAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQASASHEVSSRE 489 (497)
Q Consensus 426 l~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~~~ 489 (497)
+-...++...|.+++++++.. .+.+...|+++|+++++++.+.+...=+++..-
T Consensus 173 ~~~lK~kl~~l~~~L~~~~~e----------~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (228)
T 3q0x_A 173 LSEVKGTCHDLSDDLSRTRDD----------RDSMVAQLAQCRQQLAQLREQYDKHLLEVQAQA 226 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhheeeeccc
Confidence 333444555555555555542 234567788999999999999998887776543
No 215
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=21.73 E-value=64 Score=23.74 Aligned_cols=18 Identities=28% Similarity=0.344 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010937 430 DDEIKDLRVRVVKLEEMV 447 (497)
Q Consensus 430 ~e~i~~l~~~i~kL~e~l 447 (497)
-++|-+|+++|++|+..-
T Consensus 5 ~EEILRLErEIE~Lqrqk 22 (51)
T 2lw9_A 5 VEEILRLEKEIEDLQRMK 22 (51)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 578999999999988653
No 216
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=21.66 E-value=90 Score=25.45 Aligned_cols=37 Identities=11% Similarity=0.212 Sum_probs=26.6
Q ss_pred cCCCCCCeeEEEeCCCceeeeEEEeeccC------CceEEEEe
Q 010937 102 QRYSVGSKCRFRYNDGRWYDGRIIGLEET------DSAKVSFL 138 (497)
Q Consensus 102 ~~~~vG~kC~A~~~dG~~Y~A~I~~i~~~------~~vrV~Fl 138 (497)
..|.+|+-|-|+..-=-|-||+|+.+..+ ..+.|.|.
T Consensus 4 ~~f~~GdlVwaK~~g~p~WPa~V~~~~~~~~k~~~~~~~V~FF 46 (94)
T 3qby_A 4 HAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFF 46 (94)
T ss_dssp CCCCTTCEEEECCTTSCCEEEEECCCCTTSBCCCTTCEEEEET
T ss_pred CcCccCCEEEEecCCCCCCCEEEeecccccccCCCCEEEEEEE
Confidence 46899999999984225889999987532 24556664
No 217
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=21.55 E-value=3.2e+02 Score=23.58 Aligned_cols=31 Identities=6% Similarity=-0.058 Sum_probs=23.5
Q ss_pred CcccccCCCeEEEeecCCCCceEeeEEeeeeC
Q 010937 182 SWEQSLVGSTIWALSDDKVGIWRKAELGSWDD 213 (497)
Q Consensus 182 d~~~l~~Gs~~la~~~~~dglW~~a~i~~~d~ 213 (497)
....|++|..++...+ .+|-+...+|.+|..
T Consensus 88 ~A~~l~~GD~v~~~~~-~~~~~~~~~V~~v~~ 118 (145)
T 1at0_A 88 FADRIEEKNQVLVRDV-ETGELRPQRVVKVGS 118 (145)
T ss_dssp EGGGCCTTCEEEEECT-TTCCEEEEEEEEEEE
T ss_pred EHHHCcCCCEEEEecC-CCCCEEEEEEEEEEE
Confidence 3468889999987632 246699999998864
No 218
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=21.17 E-value=4.1e+02 Score=24.66 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=28.9
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 010937 427 VAYDDEIKDLRVRVVKLEEMVNRNKN-EKAVFEAAMRKLNETRKALAQAEAAQASASHEVS 486 (497)
Q Consensus 427 ~~~~e~i~~l~~~i~kL~e~l~Rn~~-~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~ 486 (497)
-+.+.+++.|+.++.+|...+...+. -..........++.++++|+.++....++...+.
T Consensus 52 ~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ir 112 (189)
T 2v71_A 52 VQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVR 112 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444443332 2223333444466666666666666666655553
No 219
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=21.12 E-value=2.6e+02 Score=28.81 Aligned_cols=59 Identities=8% Similarity=0.102 Sum_probs=43.2
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHh
Q 010937 427 VAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQASASHEVSS 487 (497)
Q Consensus 427 ~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~ 487 (497)
+....++.+|+.+...+...+.. +...-.+.+..+...+..+|..+++++..+..+++.
T Consensus 38 r~~~~~~~~l~~~~n~~sk~i~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (421)
T 1ses_A 38 QELKKRLQEVQTERNQVAKRVPK--APPEEKEALIARGKALGEEAKRLEEALREKEARLEA 96 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777777777777777765 333456677788888888888888888887777654
No 220
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=20.83 E-value=1.8e+02 Score=30.48 Aligned_cols=61 Identities=15% Similarity=0.174 Sum_probs=39.5
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHh
Q 010937 427 VAYDDEIKDLRVRVVKLEEMVNRNKNEKAVFEAAMRKLNETRKALAQAEAAQASASHEVSS 487 (497)
Q Consensus 427 ~~~~e~i~~l~~~i~kL~e~l~Rn~~~~~~~~~i~~kL~~~~~~L~~~~a~~~si~~~~~~ 487 (497)
+....++.+|+.+...+...+..-++...-.+.+..+..++..+|..+++++..+..+++.
T Consensus 41 r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (455)
T 2dq0_A 41 RTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDY 101 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666667777777766666433222234567777777788888888887777776654
No 221
>3frt_A Charged multivesicular BODY protein 3; ESCRT, ESCRT-111, CHMP, IST1, coiled coil, cytoplasm, lipoprotein, membrane, myristate, phosphoprotein; 4.00A {Homo sapiens}
Probab=20.77 E-value=3e+02 Score=25.95 Aligned_cols=68 Identities=19% Similarity=0.262 Sum_probs=43.8
Q ss_pred hhhhhHHhhhcHHHHHHHHHHHHHHHHHHHhcc--CchHHHHHHHHHHHHHHHHHH---HHHHHHHhHHHHHH
Q 010937 419 KKISRRDLVAYDDEIKDLRVRVVKLEEMVNRNK--NEKAVFEAAMRKLNETRKALA---QAEAAQASASHEVS 486 (497)
Q Consensus 419 ~k~~~r~l~~~~e~i~~l~~~i~kL~e~l~Rn~--~~~~~~~~i~~kL~~~~~~L~---~~~a~~~si~~~~~ 486 (497)
+...|+..++++-+|..|+++-.|++..|..-. ++...+.-+...|...|++.. .+++++.+++-.++
T Consensus 16 ~r~Lr~~~R~LdR~~~kle~eEkk~~~~IKkaakkg~~~~arilAkelVR~Rk~~~rl~~~kaqL~sV~~rlq 88 (218)
T 3frt_A 16 SLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMK 88 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555667778888888888887777776655 366666666666666666544 44555555554443
No 222
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=20.58 E-value=74 Score=20.17 Aligned_cols=23 Identities=39% Similarity=0.419 Sum_probs=19.1
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHh
Q 010937 427 VAYDDEIKDLRVRVVKLEEMVNR 449 (497)
Q Consensus 427 ~~~~e~i~~l~~~i~kL~e~l~R 449 (497)
.+.+-.+++|++++-||+-.++|
T Consensus 4 ykldanvkrlekevgklegevar 26 (28)
T 4dac_A 4 YKLDANVKRLEKEVGKLEGEVAR 26 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eeccccHHHHHHHHhhhhhhhhh
Confidence 45677889999999999988776
Done!