Query 010939
Match_columns 497
No_of_seqs 138 out of 1124
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 17:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010939.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010939hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 2E-188 6E-193 1492.4 40.2 494 1-496 46-540 (555)
2 1pj3_A NAD-dependent malic enz 100.0 1E-187 5E-192 1489.2 40.3 495 1-496 48-545 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 9E-188 3E-192 1494.3 38.4 494 1-496 82-577 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 1E-122 4E-127 971.0 30.5 379 39-488 59-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 3E-114 9E-119 897.8 21.1 360 28-468 24-390 (398)
6 1vl6_A Malate oxidoreductase; 100.0 4E-109 1E-113 857.9 22.8 354 27-465 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 7E-88 2.4E-92 710.2 27.2 383 29-493 23-420 (439)
8 3h9u_A Adenosylhomocysteinase; 98.9 3.8E-09 1.3E-13 111.5 12.0 130 204-367 171-311 (436)
9 3gvp_A Adenosylhomocysteinase 98.9 1.5E-08 5.1E-13 106.9 14.8 169 158-365 111-318 (435)
10 1x13_A NAD(P) transhydrogenase 98.4 1.4E-07 4.7E-12 98.2 3.9 216 72-355 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 98.0 2.5E-05 8.5E-10 83.0 12.1 129 204-366 207-346 (464)
12 3ond_A Adenosylhomocysteinase; 98.0 1.3E-05 4.5E-10 85.7 9.6 132 204-368 225-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.5 0.001 3.5E-08 68.3 14.2 229 72-354 19-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.3 0.00022 7.6E-09 74.7 6.2 231 73-361 45-322 (405)
15 3p2y_A Alanine dehydrogenase/p 97.1 0.00059 2E-08 71.0 6.4 104 235-355 182-305 (381)
16 3d4o_A Dipicolinate synthase s 96.8 0.0097 3.3E-07 58.5 12.1 122 215-365 133-255 (293)
17 3aoe_E Glutamate dehydrogenase 96.8 0.01 3.4E-07 62.5 12.7 186 159-367 123-332 (419)
18 3k92_A NAD-GDH, NAD-specific g 96.8 0.015 5.2E-07 61.3 13.9 178 159-355 126-329 (424)
19 4fcc_A Glutamate dehydrogenase 96.8 0.097 3.3E-06 55.5 20.0 182 159-355 141-354 (450)
20 1a4i_A Methylenetetrahydrofola 96.6 0.0049 1.7E-07 62.3 8.4 96 215-354 143-239 (301)
21 3l07_A Bifunctional protein fo 96.4 0.0086 2.9E-07 60.1 8.7 82 218-337 142-224 (285)
22 2bma_A Glutamate dehydrogenase 96.3 0.058 2E-06 57.5 14.8 178 160-355 159-372 (470)
23 3p2o_A Bifunctional protein fo 96.2 0.013 4.5E-07 58.8 8.7 83 217-337 140-223 (285)
24 3aog_A Glutamate dehydrogenase 96.2 0.097 3.3E-06 55.4 15.6 176 159-355 140-344 (440)
25 1b0a_A Protein (fold bifunctio 96.1 0.01 3.6E-07 59.5 7.8 96 215-354 137-233 (288)
26 3jyo_A Quinate/shikimate dehyd 96.1 0.014 4.8E-07 57.9 8.6 88 221-328 111-205 (283)
27 3ngx_A Bifunctional protein fo 96.1 0.014 4.8E-07 58.3 8.2 81 216-336 131-212 (276)
28 3r3j_A Glutamate dehydrogenase 96.1 0.25 8.6E-06 52.5 18.2 190 159-367 145-368 (456)
29 4a5o_A Bifunctional protein fo 96.0 0.017 5.6E-07 58.1 8.6 82 218-337 142-224 (286)
30 2yfq_A Padgh, NAD-GDH, NAD-spe 96.0 0.07 2.4E-06 56.1 13.6 179 159-355 116-326 (421)
31 1edz_A 5,10-methylenetetrahydr 96.0 0.01 3.5E-07 60.4 6.9 111 220-354 151-277 (320)
32 4a26_A Putative C-1-tetrahydro 95.8 0.019 6.7E-07 57.9 8.2 86 214-337 142-230 (300)
33 3tri_A Pyrroline-5-carboxylate 95.8 0.048 1.7E-06 53.3 10.7 121 237-386 3-127 (280)
34 1v9l_A Glutamate dehydrogenase 95.4 0.098 3.4E-06 55.0 11.8 176 159-355 115-325 (421)
35 1gpj_A Glutamyl-tRNA reductase 95.3 0.13 4.5E-06 53.0 12.4 102 234-355 164-269 (404)
36 1v8b_A Adenosylhomocysteinase; 95.3 0.086 2.9E-06 56.3 11.1 124 211-367 234-357 (479)
37 2c2x_A Methylenetetrahydrofola 95.2 0.041 1.4E-06 55.1 8.0 98 215-354 136-234 (281)
38 3oj0_A Glutr, glutamyl-tRNA re 95.2 0.011 3.6E-07 51.6 3.4 87 215-327 4-90 (144)
39 2tmg_A Protein (glutamate dehy 95.2 0.54 1.8E-05 49.3 16.7 178 160-355 115-319 (415)
40 3don_A Shikimate dehydrogenase 95.2 0.02 7E-07 56.7 5.7 86 221-328 101-186 (277)
41 1c1d_A L-phenylalanine dehydro 95.1 0.36 1.2E-05 49.6 14.9 164 161-356 92-266 (355)
42 2egg_A AROE, shikimate 5-dehyd 94.9 0.029 9.8E-07 55.7 5.8 87 222-328 125-215 (297)
43 2rir_A Dipicolinate synthase, 94.8 0.056 1.9E-06 53.1 7.5 110 228-365 148-257 (300)
44 3u62_A Shikimate dehydrogenase 94.7 0.069 2.3E-06 52.1 7.8 125 168-327 42-176 (253)
45 1bgv_A Glutamate dehydrogenase 94.6 1.1 3.7E-05 47.6 17.0 180 160-355 136-350 (449)
46 4e12_A Diketoreductase; oxidor 94.4 0.074 2.5E-06 51.8 7.3 97 238-357 5-124 (283)
47 3d64_A Adenosylhomocysteinase; 94.3 0.1 3.5E-06 55.9 8.8 111 214-355 257-367 (494)
48 3u95_A Glycoside hydrolase, fa 94.1 0.11 3.9E-06 55.1 8.4 124 238-374 1-178 (477)
49 1pzg_A LDH, lactate dehydrogen 94.0 0.12 4E-06 52.1 8.1 105 238-356 10-136 (331)
50 3fbt_A Chorismate mutase and s 93.9 0.088 3E-06 52.3 6.8 49 222-281 107-155 (282)
51 1mld_A Malate dehydrogenase; o 93.9 0.23 7.7E-06 49.6 9.8 101 239-355 2-120 (314)
52 1pjc_A Protein (L-alanine dehy 93.9 0.11 3.9E-06 52.5 7.7 96 235-354 165-269 (361)
53 3tnl_A Shikimate dehydrogenase 93.8 0.11 3.7E-06 52.5 7.2 50 221-281 138-187 (315)
54 3t4e_A Quinate/shikimate dehyd 93.7 0.1 3.6E-06 52.5 7.0 90 222-328 133-231 (312)
55 3o8q_A Shikimate 5-dehydrogena 93.7 0.097 3.3E-06 51.8 6.7 128 107-281 13-159 (281)
56 3dtt_A NADP oxidoreductase; st 93.7 0.088 3E-06 50.1 6.2 109 231-355 13-127 (245)
57 2v6b_A L-LDH, L-lactate dehydr 93.7 0.021 7E-07 56.8 1.8 122 239-378 2-139 (304)
58 3mw9_A GDH 1, glutamate dehydr 93.7 0.57 1.9E-05 50.3 12.9 179 159-355 136-352 (501)
59 2ewd_A Lactate dehydrogenase,; 93.7 0.14 4.8E-06 50.8 7.8 100 238-356 5-125 (317)
60 1hyh_A L-hicdh, L-2-hydroxyiso 93.6 0.073 2.5E-06 52.5 5.6 102 238-356 2-126 (309)
61 2dpo_A L-gulonate 3-dehydrogen 93.5 0.23 8E-06 49.8 9.2 123 237-385 6-151 (319)
62 3pwz_A Shikimate dehydrogenase 93.5 0.1 3.5E-06 51.4 6.3 130 107-281 7-153 (272)
63 1leh_A Leucine dehydrogenase; 93.5 0.17 5.9E-06 52.0 8.2 159 165-355 93-264 (364)
64 3fef_A Putative glucosidase LP 93.4 0.093 3.2E-06 55.6 6.3 106 235-355 3-149 (450)
65 3tum_A Shikimate dehydrogenase 93.4 0.14 4.7E-06 50.5 7.0 49 222-281 110-158 (269)
66 1obb_A Maltase, alpha-glucosid 93.1 0.16 5.5E-06 54.2 7.5 124 237-378 3-174 (480)
67 1zud_1 Adenylyltransferase THI 93.1 0.12 4E-06 50.0 5.9 37 234-281 25-61 (251)
68 2o4c_A Erythronate-4-phosphate 93.0 0.47 1.6E-05 49.1 10.6 195 205-446 81-292 (380)
69 3hdj_A Probable ornithine cycl 93.0 0.44 1.5E-05 47.7 10.1 114 222-366 108-228 (313)
70 3ce6_A Adenosylhomocysteinase; 92.7 0.82 2.8E-05 48.9 12.3 108 229-367 266-374 (494)
71 2hjr_A Malate dehydrogenase; m 92.6 0.11 3.7E-06 52.3 5.1 127 238-382 15-160 (328)
72 1b8p_A Protein (malate dehydro 92.5 0.099 3.4E-06 52.4 4.7 111 238-355 6-136 (329)
73 2g1u_A Hypothetical protein TM 92.5 0.24 8.3E-06 43.4 6.7 37 233-281 15-51 (155)
74 2eez_A Alanine dehydrogenase; 92.5 0.2 6.7E-06 50.9 6.9 96 235-354 164-268 (369)
75 2ekl_A D-3-phosphoglycerate de 92.4 1.2 4.1E-05 44.4 12.4 122 204-354 90-234 (313)
76 1nyt_A Shikimate 5-dehydrogena 92.3 0.23 7.9E-06 48.2 6.9 49 221-281 103-151 (271)
77 3oet_A Erythronate-4-phosphate 92.2 0.71 2.4E-05 47.9 10.8 120 204-355 83-213 (381)
78 3rui_A Ubiquitin-like modifier 92.2 0.13 4.5E-06 52.6 5.2 37 234-281 31-67 (340)
79 1jw9_B Molybdopterin biosynthe 92.1 0.17 5.7E-06 48.8 5.6 38 234-282 28-65 (249)
80 1p77_A Shikimate 5-dehydrogena 92.1 0.18 6.2E-06 49.0 5.8 49 221-281 103-151 (272)
81 1t2d_A LDH-P, L-lactate dehydr 92.0 0.13 4.4E-06 51.7 4.8 100 238-356 5-130 (322)
82 3h5n_A MCCB protein; ubiquitin 92.0 0.49 1.7E-05 48.1 9.1 38 233-281 114-151 (353)
83 2zqz_A L-LDH, L-lactate dehydr 92.0 0.13 4.5E-06 51.8 4.8 106 237-355 9-128 (326)
84 1lu9_A Methylene tetrahydromet 91.9 0.92 3.2E-05 43.9 10.6 81 187-281 64-152 (287)
85 3k5p_A D-3-phosphoglycerate de 91.9 3.6 0.00012 43.1 15.7 192 204-434 102-322 (416)
86 1gtm_A Glutamate dehydrogenase 91.9 1.5 5E-05 46.0 12.8 115 160-286 115-251 (419)
87 1x7d_A Ornithine cyclodeaminas 91.8 0.3 1E-05 49.7 7.3 115 222-364 116-239 (350)
88 2i6t_A Ubiquitin-conjugating e 91.7 0.34 1.2E-05 48.3 7.5 120 238-378 15-150 (303)
89 1ez4_A Lactate dehydrogenase; 91.6 0.16 5.4E-06 51.0 4.9 105 238-355 6-124 (318)
90 1ldn_A L-lactate dehydrogenase 91.6 0.088 3E-06 52.6 3.0 105 238-355 7-126 (316)
91 1o6z_A MDH, malate dehydrogena 91.6 0.12 4.3E-06 51.1 4.1 103 238-355 1-122 (303)
92 1s6y_A 6-phospho-beta-glucosid 91.4 0.14 4.8E-06 54.0 4.6 127 238-378 8-175 (450)
93 3d0o_A L-LDH 1, L-lactate dehy 91.3 0.21 7E-06 50.0 5.4 107 236-355 5-126 (317)
94 1a5z_A L-lactate dehydrogenase 91.3 0.25 8.6E-06 49.1 6.0 104 239-356 2-120 (319)
95 1u8x_X Maltose-6'-phosphate gl 91.3 0.2 6.7E-06 53.3 5.5 126 237-378 28-194 (472)
96 2dbq_A Glyoxylate reductase; D 91.1 2.5 8.4E-05 42.4 13.1 93 232-353 145-241 (334)
97 1txg_A Glycerol-3-phosphate de 91.0 0.38 1.3E-05 46.9 6.9 100 239-355 2-107 (335)
98 1y6j_A L-lactate dehydrogenase 90.9 0.25 8.6E-06 49.4 5.6 100 238-355 8-126 (318)
99 1lld_A L-lactate dehydrogenase 90.8 0.18 6.2E-06 49.3 4.3 103 237-356 7-128 (319)
100 3vku_A L-LDH, L-lactate dehydr 90.6 0.24 8.2E-06 50.2 5.2 106 237-355 9-128 (326)
101 2hk9_A Shikimate dehydrogenase 90.6 0.46 1.6E-05 46.1 7.0 83 221-328 113-197 (275)
102 2hmt_A YUAA protein; RCK, KTN, 90.6 0.17 5.9E-06 42.5 3.5 103 235-355 4-108 (144)
103 3d1l_A Putative NADP oxidoredu 90.6 0.19 6.4E-06 47.8 4.1 99 233-355 6-105 (266)
104 1omo_A Alanine dehydrogenase; 90.5 0.93 3.2E-05 45.3 9.4 113 222-364 112-230 (322)
105 2rcy_A Pyrroline carboxylate r 90.5 1.2 4.3E-05 41.8 9.8 92 237-356 4-95 (262)
106 2gcg_A Glyoxylate reductase/hy 90.4 1.7 5.9E-05 43.4 11.2 122 204-353 98-247 (330)
107 1smk_A Malate dehydrogenase, g 90.3 0.39 1.3E-05 48.1 6.4 104 238-355 9-128 (326)
108 2zyd_A 6-phosphogluconate dehy 90.1 0.65 2.2E-05 49.1 8.2 102 234-355 12-116 (480)
109 3h8v_A Ubiquitin-like modifier 89.9 0.3 1E-05 48.8 5.1 38 233-281 32-69 (292)
110 1up7_A 6-phospho-beta-glucosid 89.9 0.54 1.9E-05 49.1 7.3 124 238-378 3-164 (417)
111 4gsl_A Ubiquitin-like modifier 89.9 0.3 1E-05 53.7 5.5 38 234-282 323-360 (615)
112 2vhw_A Alanine dehydrogenase; 89.8 0.39 1.3E-05 49.0 6.0 95 234-352 165-268 (377)
113 3gvi_A Malate dehydrogenase; N 89.7 0.49 1.7E-05 47.7 6.6 106 235-355 5-127 (324)
114 4g2n_A D-isomer specific 2-hyd 89.7 2.3 7.8E-05 43.3 11.6 192 204-434 116-336 (345)
115 2i99_A MU-crystallin homolog; 89.7 1.1 3.7E-05 44.4 8.9 109 222-362 122-237 (312)
116 3ba1_A HPPR, hydroxyphenylpyru 89.7 1.9 6.6E-05 43.5 10.9 108 216-355 124-254 (333)
117 3i83_A 2-dehydropantoate 2-red 89.6 0.4 1.4E-05 47.3 5.7 98 238-356 3-109 (320)
118 1wwk_A Phosphoglycerate dehydr 89.6 2.1 7.2E-05 42.5 11.0 109 215-353 102-233 (307)
119 1guz_A Malate dehydrogenase; o 89.5 0.39 1.3E-05 47.6 5.6 99 239-355 2-121 (310)
120 3abi_A Putative uncharacterize 89.4 0.25 8.7E-06 49.7 4.2 89 238-353 17-109 (365)
121 3kkj_A Amine oxidase, flavin-c 89.4 0.32 1.1E-05 42.3 4.4 31 239-281 4-34 (336)
122 1oju_A MDH, malate dehydrogena 89.3 0.4 1.4E-05 47.7 5.5 103 239-355 2-121 (294)
123 4dgs_A Dehydrogenase; structur 89.2 2.2 7.6E-05 43.3 11.1 176 216-434 130-331 (340)
124 3jtm_A Formate dehydrogenase, 89.2 2.4 8.1E-05 43.3 11.2 173 204-409 108-310 (351)
125 1ur5_A Malate dehydrogenase; o 89.1 0.55 1.9E-05 46.6 6.3 103 238-355 3-122 (309)
126 2xxj_A L-LDH, L-lactate dehydr 89.1 0.19 6.5E-06 50.2 2.9 105 238-355 1-119 (310)
127 2d5c_A AROE, shikimate 5-dehyd 89.0 0.63 2.2E-05 44.5 6.5 81 222-328 102-182 (263)
128 2j6i_A Formate dehydrogenase; 88.9 1.8 6.2E-05 44.2 10.2 145 185-355 88-260 (364)
129 1z82_A Glycerol-3-phosphate de 88.9 0.36 1.2E-05 47.7 4.8 97 237-356 14-115 (335)
130 1nvt_A Shikimate 5'-dehydrogen 88.9 0.41 1.4E-05 46.7 5.2 117 119-281 33-159 (287)
131 3vh1_A Ubiquitin-like modifier 88.8 0.38 1.3E-05 52.8 5.3 38 233-281 323-360 (598)
132 3evt_A Phosphoglycerate dehydr 88.8 1.9 6.4E-05 43.5 10.0 189 204-434 83-301 (324)
133 1xdw_A NAD+-dependent (R)-2-hy 88.7 2.8 9.6E-05 42.0 11.2 137 185-353 73-235 (331)
134 4e21_A 6-phosphogluconate dehy 88.6 1.5 5.1E-05 44.7 9.3 96 235-355 20-118 (358)
135 3ado_A Lambda-crystallin; L-gu 88.6 0.63 2.1E-05 47.0 6.4 33 237-281 6-38 (319)
136 3p7m_A Malate dehydrogenase; p 88.4 0.32 1.1E-05 49.0 4.1 107 235-355 3-125 (321)
137 3tl2_A Malate dehydrogenase; c 88.4 0.39 1.3E-05 48.3 4.7 107 235-355 6-130 (315)
138 3k96_A Glycerol-3-phosphate de 88.4 1.1 3.9E-05 45.3 8.2 100 237-356 29-137 (356)
139 1hdo_A Biliverdin IX beta redu 88.4 1.6 5.4E-05 38.5 8.3 98 237-352 3-111 (206)
140 1npy_A Hypothetical shikimate 88.2 0.66 2.3E-05 45.5 6.2 48 222-281 105-152 (271)
141 4huj_A Uncharacterized protein 88.2 0.52 1.8E-05 44.0 5.2 93 238-356 24-117 (220)
142 2cuk_A Glycerate dehydrogenase 88.2 3.5 0.00012 41.0 11.5 183 204-434 87-302 (311)
143 4hy3_A Phosphoglycerate oxidor 88.0 1.9 6.6E-05 44.2 9.7 189 204-434 119-339 (365)
144 4ina_A Saccharopine dehydrogen 88.0 0.75 2.6E-05 47.3 6.7 96 238-353 2-108 (405)
145 3gt0_A Pyrroline-5-carboxylate 88.0 1 3.5E-05 42.5 7.2 98 238-356 3-101 (247)
146 1qp8_A Formate dehydrogenase; 88.0 5.2 0.00018 39.7 12.6 117 204-353 71-211 (303)
147 2d4a_B Malate dehydrogenase; a 87.9 0.51 1.7E-05 47.0 5.2 98 239-355 1-119 (308)
148 3gvx_A Glycerate dehydrogenase 87.8 2.8 9.7E-05 41.6 10.5 176 216-435 85-282 (290)
149 3nep_X Malate dehydrogenase; h 87.8 0.39 1.3E-05 48.3 4.3 104 239-355 2-121 (314)
150 1ks9_A KPA reductase;, 2-dehyd 87.5 1.1 3.6E-05 42.5 6.9 95 239-355 2-100 (291)
151 3pqe_A L-LDH, L-lactate dehydr 87.3 0.69 2.4E-05 46.7 5.8 116 237-368 5-135 (326)
152 2raf_A Putative dinucleotide-b 87.2 1.2 4.3E-05 41.2 7.1 79 233-355 15-93 (209)
153 1x0v_A GPD-C, GPDH-C, glycerol 87.0 1.3 4.3E-05 43.8 7.4 111 237-356 8-128 (354)
154 1hye_A L-lactate/malate dehydr 87.0 0.73 2.5E-05 45.7 5.7 103 239-355 2-125 (313)
155 1jay_A Coenzyme F420H2:NADP+ o 87.0 0.38 1.3E-05 43.9 3.3 98 239-356 2-101 (212)
156 2d0i_A Dehydrogenase; structur 86.7 4.1 0.00014 40.9 11.1 91 233-353 142-236 (333)
157 4aj2_A L-lactate dehydrogenase 86.5 0.35 1.2E-05 49.1 3.1 119 234-369 16-150 (331)
158 1sc6_A PGDH, D-3-phosphoglycer 86.1 9.7 0.00033 39.4 13.8 189 204-434 91-311 (404)
159 2p4q_A 6-phosphogluconate dehy 85.9 2 6.8E-05 45.7 8.7 98 238-355 11-112 (497)
160 3ldh_A Lactate dehydrogenase; 85.9 0.37 1.3E-05 49.0 2.9 124 237-378 21-163 (330)
161 3hg7_A D-isomer specific 2-hyd 85.8 1.9 6.6E-05 43.5 8.1 176 216-435 103-303 (324)
162 2x0j_A Malate dehydrogenase; o 85.8 0.95 3.2E-05 45.2 5.8 105 238-355 1-121 (294)
163 2yq5_A D-isomer specific 2-hyd 85.8 7.3 0.00025 39.5 12.4 121 204-355 92-239 (343)
164 1y7t_A Malate dehydrogenase; N 85.3 0.65 2.2E-05 46.0 4.3 111 238-355 5-133 (327)
165 2qrj_A Saccharopine dehydrogen 85.3 2 6.8E-05 44.8 8.1 71 237-339 214-289 (394)
166 2izz_A Pyrroline-5-carboxylate 85.2 1.6 5.5E-05 43.1 7.1 101 235-356 20-122 (322)
167 2w2k_A D-mandelate dehydrogena 85.2 6.7 0.00023 39.6 11.8 97 232-354 158-258 (348)
168 1hyu_A AHPF, alkyl hydroperoxi 84.9 0.82 2.8E-05 48.2 5.1 99 168-281 135-244 (521)
169 3qsg_A NAD-binding phosphogluc 84.6 5.2 0.00018 39.3 10.5 34 237-281 24-57 (312)
170 1y8q_A Ubiquitin-like 1 activa 84.6 0.77 2.6E-05 46.5 4.6 37 234-281 33-69 (346)
171 3pef_A 6-phosphogluconate dehy 84.4 0.92 3.1E-05 43.7 4.8 32 238-281 2-33 (287)
172 3lk7_A UDP-N-acetylmuramoylala 84.3 1.3 4.5E-05 45.9 6.3 118 234-392 6-126 (451)
173 3b1f_A Putative prephenate deh 84.3 1.5 5.1E-05 42.0 6.2 97 237-355 6-104 (290)
174 4fgw_A Glycerol-3-phosphate de 84.2 1.1 3.7E-05 46.6 5.5 21 239-259 36-56 (391)
175 2iz1_A 6-phosphogluconate dehy 84.1 2.4 8.1E-05 44.5 8.2 99 237-355 5-106 (474)
176 1pgj_A 6PGDH, 6-PGDH, 6-phosph 84.1 1.8 6.1E-05 45.6 7.2 100 239-355 3-106 (478)
177 1id1_A Putative potassium chan 84.1 0.98 3.3E-05 39.3 4.4 34 236-281 2-35 (153)
178 3k6j_A Protein F01G10.3, confi 84.0 1.2 4.2E-05 47.2 5.9 163 238-427 55-267 (460)
179 2nac_A NAD-dependent formate d 84.0 3.9 0.00013 42.4 9.6 191 204-433 135-356 (393)
180 1f0y_A HCDH, L-3-hydroxyacyl-C 84.0 1.1 3.7E-05 43.6 5.2 32 238-281 16-47 (302)
181 3phh_A Shikimate dehydrogenase 84.0 0.86 2.9E-05 44.9 4.5 98 222-352 107-209 (269)
182 2pi1_A D-lactate dehydrogenase 83.9 5.8 0.0002 39.9 10.7 128 215-374 100-250 (334)
183 1tt5_B Ubiquitin-activating en 83.9 0.74 2.5E-05 48.4 4.2 37 234-281 37-73 (434)
184 3doj_A AT3G25530, dehydrogenas 83.7 1.1 3.9E-05 43.9 5.2 36 234-281 18-53 (310)
185 3pp8_A Glyoxylate/hydroxypyruv 83.7 2.6 8.8E-05 42.3 7.9 187 204-434 86-301 (315)
186 3l6d_A Putative oxidoreductase 83.6 1.5 5E-05 43.1 6.0 36 234-281 6-41 (306)
187 3c85_A Putative glutathione-re 83.6 0.7 2.4E-05 41.3 3.4 37 234-281 36-72 (183)
188 3e8x_A Putative NAD-dependent 83.6 2 6.7E-05 39.5 6.5 101 233-352 17-131 (236)
189 1lss_A TRK system potassium up 83.5 1.3 4.3E-05 36.9 4.8 33 237-281 4-36 (140)
190 4dll_A 2-hydroxy-3-oxopropiona 83.5 1.1 3.7E-05 44.3 5.0 35 235-281 29-63 (320)
191 3vrd_B FCCB subunit, flavocyto 83.4 1.3 4.5E-05 44.1 5.6 35 237-281 2-36 (401)
192 1yj8_A Glycerol-3-phosphate de 83.4 1.4 4.8E-05 44.3 5.8 110 238-356 22-145 (375)
193 3c24_A Putative oxidoreductase 83.2 1.6 5.6E-05 41.9 6.0 91 238-355 12-104 (286)
194 3gg9_A D-3-phosphoglycerate de 83.1 4.7 0.00016 41.0 9.6 161 232-434 155-325 (352)
195 3fi9_A Malate dehydrogenase; s 83.0 0.87 3E-05 46.4 4.1 107 235-355 6-129 (343)
196 2h78_A Hibadh, 3-hydroxyisobut 82.9 1.1 3.7E-05 43.4 4.7 32 238-281 4-35 (302)
197 3fwz_A Inner membrane protein 82.8 0.74 2.5E-05 39.7 3.1 32 238-281 8-39 (140)
198 2vns_A Metalloreductase steap3 82.6 1.2 4.2E-05 41.4 4.7 94 235-356 26-119 (215)
199 3pdu_A 3-hydroxyisobutyrate de 82.4 1.1 3.8E-05 43.2 4.5 32 238-281 2-33 (287)
200 2g76_A 3-PGDH, D-3-phosphoglyc 82.0 5.8 0.0002 40.0 9.8 121 204-354 111-257 (335)
201 3llv_A Exopolyphosphatase-rela 81.7 0.76 2.6E-05 39.2 2.7 34 236-281 5-38 (141)
202 4b4u_A Bifunctional protein fo 81.6 4.5 0.00015 40.8 8.6 84 216-337 158-242 (303)
203 1j4a_A D-LDH, D-lactate dehydr 81.4 11 0.00036 37.8 11.4 122 204-355 92-238 (333)
204 2uyy_A N-PAC protein; long-cha 81.3 1.9 6.5E-05 41.9 5.8 32 238-281 31-62 (316)
205 2pgd_A 6-phosphogluconate dehy 81.3 3.6 0.00012 43.2 8.2 98 238-355 3-104 (482)
206 4egb_A DTDP-glucose 4,6-dehydr 81.3 4.6 0.00016 39.0 8.5 106 235-352 22-149 (346)
207 3ip1_A Alcohol dehydrogenase, 81.2 7 0.00024 39.5 10.1 83 222-327 198-292 (404)
208 2z2v_A Hypothetical protein PH 81.2 1 3.4E-05 45.9 3.8 120 236-384 15-137 (365)
209 1bg6_A N-(1-D-carboxylethyl)-L 80.9 4.6 0.00016 39.4 8.4 96 238-353 5-110 (359)
210 4gwg_A 6-phosphogluconate dehy 80.8 4 0.00014 43.4 8.4 99 237-355 4-106 (484)
211 1y8q_B Anthracycline-, ubiquit 80.7 1.7 5.8E-05 48.0 5.7 37 234-281 14-50 (640)
212 3cky_A 2-hydroxymethyl glutara 80.4 1.7 5.8E-05 41.7 5.0 32 238-281 5-36 (301)
213 1mx3_A CTBP1, C-terminal bindi 80.1 8.6 0.00029 39.0 10.3 208 185-433 89-333 (347)
214 3o38_A Short chain dehydrogena 79.9 2.9 0.0001 39.2 6.4 76 234-328 19-112 (266)
215 3hn2_A 2-dehydropantoate 2-red 79.7 1.6 5.5E-05 42.7 4.7 100 238-355 3-106 (312)
216 3gpi_A NAD-dependent epimerase 79.6 1.2 4.3E-05 42.0 3.7 96 236-352 2-109 (286)
217 2q1w_A Putative nucleotide sug 79.5 6.4 0.00022 38.0 8.8 104 234-352 18-137 (333)
218 4hb9_A Similarities with proba 79.4 1.7 5.7E-05 42.5 4.7 32 238-281 2-33 (412)
219 1dxy_A D-2-hydroxyisocaproate 79.3 15 0.00053 36.7 11.8 121 204-355 90-236 (333)
220 3qha_A Putative oxidoreductase 79.1 2 6.7E-05 41.9 5.0 33 237-281 15-47 (296)
221 2dq4_A L-threonine 3-dehydroge 79.0 3.8 0.00013 40.3 7.1 93 214-327 143-241 (343)
222 3d1c_A Flavin-containing putat 79.0 1.7 5.7E-05 42.3 4.5 35 237-282 4-38 (369)
223 4e5n_A Thermostable phosphite 78.9 6.4 0.00022 39.5 8.9 195 204-434 89-317 (330)
224 2pzm_A Putative nucleotide sug 78.8 4.9 0.00017 38.8 7.8 104 232-352 15-136 (330)
225 1yb4_A Tartronic semialdehyde 78.0 2.8 9.6E-05 40.0 5.7 30 238-279 4-33 (295)
226 1vpd_A Tartronate semialdehyde 77.8 1.8 6.3E-05 41.4 4.3 32 238-281 6-37 (299)
227 3i6i_A Putative leucoanthocyan 77.6 1.4 4.9E-05 42.9 3.6 96 234-349 7-117 (346)
228 3r6d_A NAD-dependent epimerase 77.3 3.9 0.00013 37.1 6.2 97 238-350 6-106 (221)
229 3ggo_A Prephenate dehydrogenas 77.2 6.8 0.00023 38.8 8.4 90 237-352 33-128 (314)
230 2g5c_A Prephenate dehydrogenas 77.0 4.4 0.00015 38.6 6.7 97 238-355 2-99 (281)
231 4id9_A Short-chain dehydrogena 76.5 5.8 0.0002 38.3 7.5 96 233-352 15-126 (347)
232 4a9w_A Monooxygenase; baeyer-v 76.5 1.8 6.2E-05 41.2 3.9 34 237-282 3-36 (357)
233 3dhn_A NAD-dependent epimerase 76.4 3.5 0.00012 37.2 5.6 95 238-351 5-111 (227)
234 1gdh_A D-glycerate dehydrogena 76.2 10 0.00035 37.8 9.4 121 205-353 90-239 (320)
235 3slg_A PBGP3 protein; structur 76.2 13 0.00043 36.3 9.9 101 234-352 21-141 (372)
236 3alj_A 2-methyl-3-hydroxypyrid 76.2 2.4 8.4E-05 41.8 4.8 38 234-283 8-45 (379)
237 3fbs_A Oxidoreductase; structu 76.1 2.4 8.1E-05 39.5 4.5 32 238-281 3-34 (297)
238 1i36_A Conserved hypothetical 75.9 5.2 0.00018 37.5 6.9 30 239-280 2-31 (264)
239 2z1m_A GDP-D-mannose dehydrata 75.7 5.8 0.0002 37.9 7.2 103 236-352 2-127 (345)
240 2nvu_B Maltose binding protein 75.6 1.9 6.5E-05 48.0 4.3 35 236-281 410-444 (805)
241 5mdh_A Malate dehydrogenase; o 75.5 1.5 5.1E-05 44.3 3.1 121 238-368 4-142 (333)
242 3hwr_A 2-dehydropantoate 2-red 75.2 2.1 7.2E-05 42.2 4.0 106 233-356 15-124 (318)
243 3l4b_C TRKA K+ channel protien 75.2 2.3 8E-05 39.0 4.1 95 239-353 2-100 (218)
244 3fg2_P Putative rubredoxin red 75.1 2.6 9E-05 42.3 4.8 36 238-283 2-37 (404)
245 3f8d_A Thioredoxin reductase ( 75.0 2.6 9E-05 39.6 4.5 33 237-281 15-47 (323)
246 2zbw_A Thioredoxin reductase; 74.8 2.5 8.5E-05 40.5 4.3 34 237-282 5-38 (335)
247 3hhp_A Malate dehydrogenase; M 74.5 4.8 0.00017 40.2 6.5 103 239-355 2-121 (312)
248 2f1k_A Prephenate dehydrogenas 74.5 5 0.00017 38.0 6.3 31 239-281 2-32 (279)
249 2x5o_A UDP-N-acetylmuramoylala 74.4 9.4 0.00032 39.3 8.9 108 234-379 2-112 (439)
250 3lzw_A Ferredoxin--NADP reduct 74.0 2.9 9.9E-05 39.6 4.5 33 237-281 7-39 (332)
251 2yjz_A Metalloreductase steap4 76.1 0.66 2.3E-05 43.2 0.0 92 235-355 17-108 (201)
252 2ywl_A Thioredoxin reductase r 73.6 3.3 0.00011 36.3 4.5 32 238-281 2-33 (180)
253 4ezb_A Uncharacterized conserv 73.6 3.4 0.00012 40.8 5.1 33 238-281 25-57 (317)
254 2jae_A L-amino acid oxidase; o 73.2 3 0.0001 42.7 4.7 42 230-283 4-45 (489)
255 3dme_A Conserved exported prot 72.7 3.4 0.00011 39.7 4.7 33 237-281 4-36 (369)
256 3klj_A NAD(FAD)-dependent dehy 72.6 4 0.00014 41.2 5.5 37 236-284 8-44 (385)
257 3ic5_A Putative saccharopine d 72.6 4 0.00014 32.7 4.5 88 236-342 4-92 (118)
258 3vtz_A Glucose 1-dehydrogenase 72.6 15 0.00051 34.8 9.2 78 232-327 9-91 (269)
259 3oz2_A Digeranylgeranylglycero 72.6 3 0.0001 40.2 4.4 31 239-281 6-36 (397)
260 3s2u_A UDP-N-acetylglucosamine 72.4 6 0.0002 39.4 6.6 41 309-353 84-124 (365)
261 2pv7_A T-protein [includes: ch 72.3 7.7 0.00026 37.7 7.2 32 238-281 22-54 (298)
262 3pdi_B Nitrogenase MOFE cofact 72.2 3.3 0.00011 43.5 4.8 75 233-326 309-384 (458)
263 3h8l_A NADH oxidase; membrane 72.1 3.1 0.00011 41.6 4.5 36 238-282 2-37 (409)
264 3nix_A Flavoprotein/dehydrogen 71.8 4.4 0.00015 40.1 5.5 35 237-283 5-39 (421)
265 3itj_A Thioredoxin reductase 1 71.8 2.6 8.8E-05 40.0 3.6 33 237-281 22-54 (338)
266 3m2p_A UDP-N-acetylglucosamine 71.8 11 0.00037 35.9 8.1 93 238-352 3-109 (311)
267 3hyw_A Sulfide-quinone reducta 71.7 2.8 9.5E-05 42.7 4.1 34 238-281 3-36 (430)
268 3c96_A Flavin-containing monoo 71.1 4 0.00014 40.9 5.0 36 237-283 4-39 (410)
269 3lxd_A FAD-dependent pyridine 71.1 3.4 0.00012 41.5 4.5 38 236-283 8-45 (415)
270 3ehe_A UDP-glucose 4-epimerase 70.7 14 0.00049 35.0 8.6 94 239-352 3-114 (313)
271 1ryi_A Glycine oxidase; flavop 70.7 3.5 0.00012 40.2 4.4 35 237-283 17-51 (382)
272 2q7v_A Thioredoxin reductase; 70.6 3.8 0.00013 39.2 4.5 33 237-281 8-40 (325)
273 3rp8_A Flavoprotein monooxygen 70.6 3.9 0.00013 40.7 4.8 36 235-282 21-56 (407)
274 1y56_B Sarcosine oxidase; dehy 70.6 3.6 0.00012 40.2 4.5 34 237-282 5-38 (382)
275 3r9u_A Thioredoxin reductase; 70.5 3.9 0.00013 38.4 4.5 33 237-281 4-37 (315)
276 2xdo_A TETX2 protein; tetracyc 70.3 3.9 0.00013 40.8 4.7 37 235-283 24-60 (398)
277 2vou_A 2,6-dihydroxypyridine h 70.1 4.6 0.00016 40.2 5.2 35 236-282 4-38 (397)
278 3cty_A Thioredoxin reductase; 70.1 3.7 0.00013 39.2 4.3 33 237-281 16-48 (319)
279 3pid_A UDP-glucose 6-dehydroge 70.1 16 0.00056 38.2 9.5 40 229-281 28-67 (432)
280 3ab1_A Ferredoxin--NADP reduct 69.9 4.2 0.00014 39.6 4.7 34 237-282 14-47 (360)
281 2gf3_A MSOX, monomeric sarcosi 69.9 4 0.00014 39.8 4.6 36 237-284 3-38 (389)
282 2ahr_A Putative pyrroline carb 69.9 3.8 0.00013 38.5 4.2 90 238-355 4-93 (259)
283 2q0l_A TRXR, thioredoxin reduc 69.5 4.1 0.00014 38.5 4.5 33 238-281 2-34 (311)
284 2ph5_A Homospermidine synthase 69.5 12 0.00041 40.0 8.4 99 237-353 13-115 (480)
285 1pqw_A Polyketide synthase; ro 69.3 13 0.00043 33.2 7.5 50 220-281 22-72 (198)
286 3gg2_A Sugar dehydrogenase, UD 69.3 4.2 0.00014 42.5 4.9 32 238-281 3-34 (450)
287 3k7m_X 6-hydroxy-L-nicotine ox 69.3 4.3 0.00015 40.5 4.7 32 239-282 3-34 (431)
288 1tt5_A APPBP1, amyloid protein 69.2 2.3 8E-05 45.7 2.9 102 233-350 28-155 (531)
289 3axb_A Putative oxidoreductase 69.2 4.5 0.00015 40.8 4.9 38 232-280 18-55 (448)
290 2vdc_G Glutamate synthase [NAD 69.1 4.7 0.00016 42.0 5.1 34 236-281 121-154 (456)
291 1n2s_A DTDP-4-, DTDP-glucose o 68.9 5.5 0.00019 37.5 5.2 86 239-352 2-104 (299)
292 3kb6_A D-lactate dehydrogenase 68.9 29 0.00099 34.8 10.8 92 232-353 136-231 (334)
293 1zk7_A HGII, reductase, mercur 68.8 4.5 0.00016 41.4 4.9 33 237-281 4-36 (467)
294 3cgv_A Geranylgeranyl reductas 68.7 4.3 0.00015 39.6 4.5 35 237-283 4-38 (397)
295 3enk_A UDP-glucose 4-epimerase 68.7 14 0.00048 35.4 8.1 97 237-352 5-129 (341)
296 2c20_A UDP-glucose 4-epimerase 68.6 11 0.00038 35.9 7.3 99 238-352 2-118 (330)
297 1yvv_A Amine oxidase, flavin-c 68.5 4.4 0.00015 38.6 4.5 33 238-282 3-35 (336)
298 1c0p_A D-amino acid oxidase; a 68.4 5.3 0.00018 39.0 5.1 34 237-282 6-39 (363)
299 3i3l_A Alkylhalidase CMLS; fla 68.4 6.7 0.00023 42.3 6.3 39 235-285 21-59 (591)
300 3ef6_A Toluene 1,2-dioxygenase 68.4 4.9 0.00017 40.5 5.0 37 238-284 3-39 (410)
301 3nrc_A Enoyl-[acyl-carrier-pro 68.3 7.9 0.00027 36.8 6.2 78 234-328 23-114 (280)
302 2bka_A CC3, TAT-interacting pr 68.3 9.6 0.00033 34.6 6.6 102 235-352 16-132 (242)
303 2uzz_A N-methyl-L-tryptophan o 68.2 4.2 0.00014 39.5 4.3 35 238-284 3-37 (372)
304 2gv8_A Monooxygenase; FMO, FAD 68.1 4.2 0.00014 41.4 4.4 36 236-281 5-40 (447)
305 1e6u_A GDP-fucose synthetase; 68.1 7.1 0.00024 37.1 5.8 87 237-352 3-107 (321)
306 2cvz_A Dehydrogenase, 3-hydrox 67.9 4.2 0.00014 38.5 4.2 30 239-281 3-32 (289)
307 3dfz_A SIRC, precorrin-2 dehyd 67.8 4.3 0.00015 38.9 4.2 36 234-281 28-63 (223)
308 3grf_A Ornithine carbamoyltran 67.8 19 0.00064 36.5 9.1 137 168-323 90-240 (328)
309 2x3n_A Probable FAD-dependent 67.8 4.3 0.00015 40.2 4.3 35 237-283 6-40 (399)
310 4ej6_A Putative zinc-binding d 67.6 16 0.00054 36.5 8.5 93 211-327 158-263 (370)
311 2gqw_A Ferredoxin reductase; f 67.4 6 0.00021 39.9 5.4 38 237-284 7-44 (408)
312 3iwa_A FAD-dependent pyridine 67.4 4.5 0.00016 41.5 4.6 38 237-284 3-40 (472)
313 2gag_B Heterotetrameric sarcos 67.1 5.5 0.00019 39.1 4.9 36 237-282 21-56 (405)
314 2d8a_A PH0655, probable L-thre 66.7 6.3 0.00021 38.8 5.3 55 214-281 147-201 (348)
315 4b8w_A GDP-L-fucose synthase; 66.6 9.5 0.00033 35.5 6.3 93 234-352 3-113 (319)
316 4eqs_A Coenzyme A disulfide re 66.6 4.8 0.00017 41.2 4.6 34 239-282 2-35 (437)
317 1uzm_A 3-oxoacyl-[acyl-carrier 66.5 15 0.00051 34.1 7.6 79 231-328 9-92 (247)
318 3e48_A Putative nucleoside-dip 66.5 8.9 0.0003 36.0 6.1 97 239-352 2-106 (289)
319 3urh_A Dihydrolipoyl dehydroge 66.5 4.8 0.00016 41.6 4.6 34 237-282 25-58 (491)
320 3uox_A Otemo; baeyer-villiger 66.4 5.5 0.00019 42.4 5.1 35 236-282 8-42 (545)
321 2r9z_A Glutathione amide reduc 66.4 5 0.00017 41.3 4.7 33 237-281 4-36 (463)
322 2cul_A Glucose-inhibited divis 66.2 5.4 0.00019 36.9 4.5 33 237-281 3-35 (232)
323 2oln_A NIKD protein; flavoprot 66.2 5.1 0.00017 39.6 4.5 35 238-284 5-39 (397)
324 1dxl_A Dihydrolipoamide dehydr 66.2 5.8 0.0002 40.5 5.1 34 237-282 6-39 (470)
325 4a7p_A UDP-glucose dehydrogena 66.1 22 0.00077 37.1 9.6 124 239-380 10-183 (446)
326 1k0i_A P-hydroxybenzoate hydro 66.1 5.7 0.00019 39.1 4.8 33 238-282 3-35 (394)
327 2xve_A Flavin-containing monoo 66.1 5 0.00017 41.5 4.6 38 238-281 3-40 (464)
328 3cmm_A Ubiquitin-activating en 66.0 5.3 0.00018 46.3 5.2 38 233-281 23-60 (1015)
329 1ygy_A PGDH, D-3-phosphoglycer 66.0 19 0.00065 38.3 9.2 118 205-352 89-232 (529)
330 4ep1_A Otcase, ornithine carba 66.0 36 0.0012 34.7 10.8 130 176-327 122-257 (340)
331 3ek2_A Enoyl-(acyl-carrier-pro 65.9 7.8 0.00027 36.0 5.5 38 232-281 9-49 (271)
332 3dje_A Fructosyl amine: oxygen 65.4 5.3 0.00018 40.0 4.6 37 237-284 6-42 (438)
333 1trb_A Thioredoxin reductase; 65.4 3.4 0.00011 39.2 2.9 34 236-281 4-37 (320)
334 3nrn_A Uncharacterized protein 65.4 6.2 0.00021 39.4 5.0 33 239-283 2-34 (421)
335 2dkn_A 3-alpha-hydroxysteroid 65.3 8.8 0.0003 34.9 5.7 68 239-328 3-73 (255)
336 1vdc_A NTR, NADPH dependent th 65.2 4.5 0.00015 38.6 3.8 33 236-280 7-39 (333)
337 3ew7_A LMO0794 protein; Q8Y8U8 65.0 19 0.00066 31.8 7.8 93 239-352 2-103 (221)
338 1xq6_A Unknown protein; struct 65.0 9.7 0.00033 34.4 5.9 101 235-352 2-133 (253)
339 2p5y_A UDP-glucose 4-epimerase 65.0 12 0.00041 35.5 6.7 98 239-352 2-117 (311)
340 2x4g_A Nucleoside-diphosphate- 65.0 17 0.00057 34.7 7.8 97 238-352 14-126 (342)
341 3ka7_A Oxidoreductase; structu 65.0 6.1 0.00021 39.2 4.8 32 239-282 2-33 (425)
342 3v76_A Flavoprotein; structura 64.9 5.1 0.00017 41.2 4.4 35 237-283 27-61 (417)
343 2hqm_A GR, grase, glutathione 64.9 4.9 0.00017 41.5 4.3 35 236-282 10-44 (479)
344 1hdc_A 3-alpha, 20 beta-hydrox 64.6 6.5 0.00022 36.8 4.7 36 234-281 2-38 (254)
345 3qvo_A NMRA family protein; st 64.5 9.9 0.00034 34.9 5.9 101 235-352 21-125 (236)
346 2eq6_A Pyruvate dehydrogenase 64.4 4.8 0.00016 41.4 4.1 35 236-282 5-39 (464)
347 1np3_A Ketol-acid reductoisome 64.2 7 0.00024 39.0 5.1 88 235-349 14-104 (338)
348 1mo9_A ORF3; nucleotide bindin 64.0 5.6 0.00019 41.7 4.5 35 236-282 42-76 (523)
349 2qae_A Lipoamide, dihydrolipoy 63.9 6 0.00021 40.5 4.7 34 237-282 2-35 (468)
350 3tzq_B Short-chain type dehydr 63.8 9.2 0.00031 36.2 5.6 77 233-328 7-96 (271)
351 3i1j_A Oxidoreductase, short c 63.7 21 0.00071 32.7 7.9 38 233-281 10-47 (247)
352 2q2v_A Beta-D-hydroxybutyrate 63.6 7.9 0.00027 36.1 5.1 36 234-281 1-37 (255)
353 4ap3_A Steroid monooxygenase; 63.6 5.5 0.00019 42.4 4.5 35 236-282 20-54 (549)
354 3m6i_A L-arabinitol 4-dehydrog 63.6 11 0.00039 37.1 6.5 60 210-281 154-213 (363)
355 2o7s_A DHQ-SDH PR, bifunctiona 63.5 8.3 0.00028 40.9 5.8 36 234-281 361-396 (523)
356 4gcm_A TRXR, thioredoxin reduc 63.5 6 0.0002 37.6 4.3 32 238-281 7-38 (312)
357 1pl8_A Human sorbitol dehydrog 63.3 13 0.00046 36.6 6.9 55 214-280 150-204 (356)
358 3kd9_A Coenzyme A disulfide re 63.2 8.9 0.0003 39.0 5.8 36 237-282 3-38 (449)
359 3h28_A Sulfide-quinone reducta 63.1 6.5 0.00022 39.8 4.7 35 238-282 3-37 (430)
360 3sx6_A Sulfide-quinone reducta 62.9 6.3 0.00021 40.1 4.5 36 238-282 5-40 (437)
361 2yqu_A 2-oxoglutarate dehydrog 62.6 6.4 0.00022 40.2 4.6 33 238-282 2-34 (455)
362 4g6h_A Rotenone-insensitive NA 62.6 3.7 0.00013 43.2 2.9 32 238-281 43-74 (502)
363 3k30_A Histamine dehydrogenase 62.5 7.8 0.00027 42.2 5.5 34 237-282 391-424 (690)
364 3n74_A 3-ketoacyl-(acyl-carrie 62.4 6.9 0.00023 36.4 4.4 77 233-328 5-94 (261)
365 1fl2_A Alkyl hydroperoxide red 62.4 6.1 0.00021 37.3 4.1 32 238-281 2-33 (310)
366 1vl0_A DTDP-4-dehydrorhamnose 62.3 8.7 0.0003 36.0 5.2 87 235-352 10-113 (292)
367 2c5a_A GDP-mannose-3', 5'-epim 62.3 24 0.00082 34.8 8.6 99 236-352 28-145 (379)
368 1ges_A Glutathione reductase; 62.2 5.2 0.00018 41.0 3.8 33 237-281 4-36 (450)
369 2wpf_A Trypanothione reductase 62.1 8.2 0.00028 40.2 5.4 32 237-279 7-38 (495)
370 3ruf_A WBGU; rossmann fold, UD 61.9 9.6 0.00033 36.7 5.5 101 235-352 23-151 (351)
371 3s5w_A L-ornithine 5-monooxyge 61.7 5.4 0.00018 40.4 3.8 39 237-283 30-69 (463)
372 4gde_A UDP-galactopyranose mut 61.6 7.7 0.00026 39.4 5.0 23 237-259 10-32 (513)
373 1dlj_A UDP-glucose dehydrogena 61.4 5.2 0.00018 41.0 3.6 30 239-281 2-31 (402)
374 2zcu_A Uncharacterized oxidore 61.4 7.1 0.00024 36.4 4.3 98 239-352 1-104 (286)
375 2a8x_A Dihydrolipoyl dehydroge 61.3 6 0.0002 40.5 4.1 33 237-281 3-35 (464)
376 2bi7_A UDP-galactopyranose mut 61.3 6.7 0.00023 39.5 4.4 34 237-282 3-36 (384)
377 3tpf_A Otcase, ornithine carba 61.3 56 0.0019 32.7 11.1 135 168-325 81-222 (307)
378 2a87_A TRXR, TR, thioredoxin r 61.2 5.5 0.00019 38.4 3.6 34 236-281 13-46 (335)
379 1zmd_A Dihydrolipoyl dehydroge 61.1 6.8 0.00023 40.2 4.5 34 237-282 6-39 (474)
380 1hxh_A 3BETA/17BETA-hydroxyste 61.1 7.1 0.00024 36.4 4.3 37 234-281 3-39 (253)
381 3ktd_A Prephenate dehydrogenas 61.1 11 0.00038 38.0 6.0 88 238-351 9-100 (341)
382 2yy7_A L-threonine dehydrogena 61.0 7.3 0.00025 36.8 4.3 99 238-352 3-118 (312)
383 3sxp_A ADP-L-glycero-D-mannohe 61.0 23 0.0008 34.4 8.2 108 233-352 6-138 (362)
384 1onf_A GR, grase, glutathione 60.9 6.6 0.00023 40.8 4.4 33 238-282 3-35 (500)
385 1q1r_A Putidaredoxin reductase 60.9 8.6 0.00029 39.2 5.1 37 237-283 4-40 (431)
386 3tpc_A Short chain alcohol deh 60.8 24 0.00083 32.8 7.9 76 234-327 4-91 (257)
387 2weu_A Tryptophan 5-halogenase 60.8 5.9 0.0002 40.9 4.0 37 238-283 3-39 (511)
388 3sc6_A DTDP-4-dehydrorhamnose 60.8 6.6 0.00023 36.7 4.0 84 238-352 6-106 (287)
389 1ebd_A E3BD, dihydrolipoamide 60.7 6.4 0.00022 40.1 4.2 32 238-281 4-35 (455)
390 1kyq_A Met8P, siroheme biosynt 60.7 5.4 0.00018 39.4 3.4 36 234-281 10-45 (274)
391 3qj4_A Renalase; FAD/NAD(P)-bi 60.7 5.2 0.00018 38.8 3.3 35 238-281 2-36 (342)
392 2wm3_A NMRA-like family domain 60.7 5 0.00017 38.0 3.1 99 237-353 5-115 (299)
393 2q1s_A Putative nucleotide sug 60.6 13 0.00043 36.7 6.2 103 234-352 29-151 (377)
394 3cgb_A Pyridine nucleotide-dis 60.6 6.2 0.00021 40.8 4.1 65 210-284 6-73 (480)
395 3ntd_A FAD-dependent pyridine 60.4 9.4 0.00032 39.9 5.5 37 238-284 2-38 (565)
396 2bry_A NEDD9 interacting prote 60.4 7.9 0.00027 40.5 4.9 37 236-284 91-127 (497)
397 2qa2_A CABE, polyketide oxygen 60.3 7.5 0.00026 40.7 4.7 35 236-282 11-45 (499)
398 1yqd_A Sinapyl alcohol dehydro 60.2 19 0.00064 35.8 7.4 50 220-281 171-220 (366)
399 2qcu_A Aerobic glycerol-3-phos 60.2 7.4 0.00025 40.5 4.6 34 237-282 3-36 (501)
400 2aqj_A Tryptophan halogenase, 60.1 9.5 0.00032 39.9 5.4 38 237-283 5-42 (538)
401 3lad_A Dihydrolipoamide dehydr 60.0 8.5 0.00029 39.4 5.0 33 237-281 3-35 (476)
402 3ics_A Coenzyme A-disulfide re 60.0 11 0.00036 40.0 5.8 39 236-284 35-73 (588)
403 2e4g_A Tryptophan halogenase; 59.9 8 0.00027 40.8 4.9 38 237-283 25-62 (550)
404 3o0h_A Glutathione reductase; 59.9 8.2 0.00028 39.8 4.9 33 237-281 26-58 (484)
405 1m6i_A Programmed cell death p 59.7 9.1 0.00031 39.8 5.2 38 236-283 10-47 (493)
406 4a5l_A Thioredoxin reductase; 59.5 6.5 0.00022 37.0 3.7 31 239-281 6-36 (314)
407 3l8k_A Dihydrolipoyl dehydroge 59.3 8.2 0.00028 39.6 4.7 35 237-283 4-38 (466)
408 3dqp_A Oxidoreductase YLBE; al 59.3 15 0.00051 33.0 6.0 94 239-352 2-106 (219)
409 1mv8_A GMD, GDP-mannose 6-dehy 59.1 9.2 0.00031 39.4 5.0 31 239-281 2-32 (436)
410 3ihm_A Styrene monooxygenase A 59.0 7.2 0.00024 39.7 4.2 32 238-281 23-54 (430)
411 3c4a_A Probable tryptophan hyd 59.0 8.7 0.0003 38.0 4.7 34 239-282 2-35 (381)
412 4a2c_A Galactitol-1-phosphate 58.8 27 0.00094 33.9 8.2 57 212-280 137-193 (346)
413 1lvl_A Dihydrolipoamide dehydr 58.7 8.2 0.00028 39.6 4.6 33 237-281 5-37 (458)
414 1sb8_A WBPP; epimerase, 4-epim 58.7 12 0.00043 36.1 5.7 101 235-352 25-153 (352)
415 3r1i_A Short-chain type dehydr 58.6 33 0.0011 32.6 8.6 77 234-328 29-120 (276)
416 1w4x_A Phenylacetone monooxyge 58.6 9 0.00031 40.3 5.0 35 236-282 15-49 (542)
417 2nu8_A Succinyl-COA ligase [AD 58.5 18 0.00062 35.4 6.8 86 237-348 7-93 (288)
418 2e1m_A L-glutamate oxidase; L- 58.4 9.2 0.00031 39.1 4.8 35 235-281 42-76 (376)
419 1zk4_A R-specific alcohol dehy 58.4 8.5 0.00029 35.3 4.2 38 233-281 2-39 (251)
420 2bc0_A NADH oxidase; flavoprot 58.2 9.7 0.00033 39.4 5.1 37 237-282 35-71 (490)
421 3oc4_A Oxidoreductase, pyridin 58.2 8.8 0.0003 39.1 4.7 36 238-283 3-38 (452)
422 3st7_A Capsular polysaccharide 58.0 26 0.00087 34.3 7.9 79 239-352 2-94 (369)
423 2qa1_A PGAE, polyketide oxygen 57.9 8.8 0.0003 40.1 4.7 36 234-281 8-43 (500)
424 2v3a_A Rubredoxin reductase; a 57.7 7.9 0.00027 38.4 4.1 35 237-281 4-38 (384)
425 3csu_A Protein (aspartate carb 57.7 83 0.0028 31.5 11.6 129 176-326 95-230 (310)
426 1v59_A Dihydrolipoamide dehydr 57.7 9.2 0.00031 39.2 4.7 34 237-282 5-38 (478)
427 3c4n_A Uncharacterized protein 57.7 9.6 0.00033 38.2 4.8 35 238-282 37-71 (405)
428 3gwf_A Cyclohexanone monooxyge 57.6 7.4 0.00025 41.3 4.1 35 237-282 8-42 (540)
429 2ew2_A 2-dehydropantoate 2-red 57.6 9.7 0.00033 36.1 4.6 100 238-355 4-111 (316)
430 1fmc_A 7 alpha-hydroxysteroid 57.5 16 0.00054 33.5 5.9 36 234-281 8-44 (255)
431 2ydy_A Methionine adenosyltran 57.3 22 0.00076 33.6 7.1 92 237-352 2-110 (315)
432 1zq6_A Otcase, ornithine carba 57.3 63 0.0022 33.2 10.8 116 192-326 145-274 (359)
433 1rpn_A GDP-mannose 4,6-dehydra 57.0 22 0.00076 33.8 7.1 104 235-352 12-138 (335)
434 3rwb_A TPLDH, pyridoxal 4-dehy 56.9 15 0.00051 34.2 5.7 37 233-281 2-39 (247)
435 2gqf_A Hypothetical protein HI 56.9 6.7 0.00023 39.9 3.5 35 237-283 4-38 (401)
436 3gaf_A 7-alpha-hydroxysteroid 56.8 23 0.00078 33.1 7.0 38 233-281 8-45 (256)
437 3l9w_A Glutathione-regulated p 56.7 6.4 0.00022 40.7 3.4 98 238-353 5-103 (413)
438 1ojt_A Surface protein; redox- 56.7 9.4 0.00032 39.4 4.6 34 237-282 6-39 (482)
439 1s3e_A Amine oxidase [flavin-c 56.7 9.3 0.00032 39.5 4.6 34 237-282 4-37 (520)
440 2vvm_A Monoamine oxidase N; FA 56.6 9.5 0.00033 38.9 4.6 32 238-281 40-71 (495)
441 1o94_A Tmadh, trimethylamine d 56.5 9.7 0.00033 41.9 5.0 34 237-282 389-422 (729)
442 1yb1_A 17-beta-hydroxysteroid 56.4 34 0.0012 32.1 8.2 38 233-281 27-64 (272)
443 2zb4_A Prostaglandin reductase 56.4 21 0.00074 35.0 7.0 56 215-281 137-195 (357)
444 4gbj_A 6-phosphogluconate dehy 56.2 14 0.00047 36.2 5.5 32 238-281 6-37 (297)
445 3nyc_A D-arginine dehydrogenas 56.2 6.4 0.00022 38.0 3.1 33 237-282 9-41 (381)
446 3f1l_A Uncharacterized oxidore 56.2 28 0.00097 32.3 7.5 37 233-281 8-45 (252)
447 3ihg_A RDME; flavoenzyme, anth 56.1 8.4 0.00029 40.1 4.2 34 237-282 5-38 (535)
448 1nff_A Putative oxidoreductase 56.1 20 0.00068 33.6 6.5 38 233-281 3-40 (260)
449 4eez_A Alcohol dehydrogenase 1 56.0 28 0.00095 33.8 7.7 50 220-281 148-197 (348)
450 3ec7_A Putative dehydrogenase; 55.9 7.4 0.00025 38.8 3.6 97 234-349 20-116 (357)
451 2i0z_A NAD(FAD)-utilizing dehy 55.8 9.3 0.00032 39.0 4.4 34 238-283 27-60 (447)
452 3k31_A Enoyl-(acyl-carrier-pro 55.6 19 0.00064 34.7 6.3 80 233-328 26-119 (296)
453 2cdu_A NADPH oxidase; flavoenz 55.6 10 0.00035 38.6 4.7 34 239-282 2-35 (452)
454 2pnf_A 3-oxoacyl-[acyl-carrier 55.5 29 0.00098 31.5 7.3 38 233-281 3-40 (248)
455 3ko8_A NAD-dependent epimerase 55.5 32 0.0011 32.3 7.8 94 239-352 2-113 (312)
456 1ek6_A UDP-galactose 4-epimera 55.3 15 0.0005 35.3 5.5 101 238-352 3-132 (348)
457 2pyx_A Tryptophan halogenase; 55.3 11 0.00038 39.3 5.0 40 237-283 7-53 (526)
458 1lqt_A FPRA; NADP+ derivative, 55.2 11 0.00038 39.0 4.9 38 237-281 3-42 (456)
459 1o5i_A 3-oxoacyl-(acyl carrier 55.2 47 0.0016 30.8 8.9 76 233-328 15-92 (249)
460 3op4_A 3-oxoacyl-[acyl-carrier 55.2 11 0.00038 35.1 4.5 77 234-328 6-94 (248)
461 1fec_A Trypanothione reductase 55.1 13 0.00044 38.6 5.4 32 237-279 3-34 (490)
462 1nhp_A NADH peroxidase; oxidor 55.1 11 0.00036 38.4 4.7 35 239-283 2-36 (447)
463 3ghy_A Ketopantoate reductase 55.1 10 0.00035 37.3 4.5 102 237-355 3-107 (335)
464 2iid_A L-amino-acid oxidase; f 55.0 13 0.00045 37.9 5.4 33 237-281 33-65 (498)
465 1wdk_A Fatty oxidation complex 55.0 14 0.00049 40.8 6.0 35 235-281 312-346 (715)
466 3h7a_A Short chain dehydrogena 54.8 32 0.0011 32.0 7.7 76 234-327 4-93 (252)
467 1pjq_A CYSG, siroheme synthase 54.8 12 0.0004 39.1 5.0 26 234-259 9-34 (457)
468 3dk9_A Grase, GR, glutathione 54.8 9.7 0.00033 39.1 4.3 34 236-281 19-52 (478)
469 3uko_A Alcohol dehydrogenase c 54.8 23 0.0008 35.2 7.1 37 233-280 190-226 (378)
470 3lov_A Protoporphyrinogen oxid 54.8 15 0.00052 37.1 5.8 36 237-282 4-39 (475)
471 3nks_A Protoporphyrinogen oxid 54.7 9.4 0.00032 38.5 4.2 34 238-281 3-36 (477)
472 1rkx_A CDP-glucose-4,6-dehydra 54.6 23 0.0008 34.1 6.9 102 235-352 7-132 (357)
473 2bcg_G Secretory pathway GDP d 54.5 10 0.00035 38.9 4.4 36 237-284 11-46 (453)
474 4fs3_A Enoyl-[acyl-carrier-pro 54.5 13 0.00046 35.0 5.0 36 234-281 3-41 (256)
475 4dgk_A Phytoene dehydrogenase; 54.5 8.5 0.00029 39.2 3.8 22 238-259 2-23 (501)
476 1xdi_A RV3303C-LPDA; reductase 54.4 9.8 0.00034 39.4 4.4 36 238-282 3-38 (499)
477 2cdc_A Glucose dehydrogenase g 54.4 32 0.0011 34.0 7.9 33 237-281 181-213 (366)
478 3oig_A Enoyl-[acyl-carrier-pro 54.3 25 0.00086 32.7 6.8 37 233-281 3-42 (266)
479 1gy8_A UDP-galactose 4-epimera 54.2 20 0.00067 35.2 6.3 103 238-352 3-144 (397)
480 1wly_A CAAR, 2-haloacrylate re 54.2 23 0.00078 34.4 6.8 52 218-281 127-179 (333)
481 3cmm_A Ubiquitin-activating en 54.1 9.2 0.00032 44.4 4.4 41 235-281 423-463 (1015)
482 4b63_A L-ornithine N5 monooxyg 54.1 7.5 0.00026 40.7 3.4 22 239-260 41-62 (501)
483 1xhc_A NADH oxidase /nitrite r 54.1 7.9 0.00027 38.6 3.4 35 237-284 8-42 (367)
484 2gn4_A FLAA1 protein, UDP-GLCN 53.9 12 0.0004 36.9 4.6 102 232-352 16-142 (344)
485 7mdh_A Protein (malate dehydro 53.9 12 0.00041 38.6 4.8 110 237-355 32-161 (375)
486 3rkr_A Short chain oxidoreduct 53.9 34 0.0012 31.9 7.7 36 234-281 26-62 (262)
487 3e1t_A Halogenase; flavoprotei 53.8 13 0.00044 38.7 5.1 35 237-283 7-41 (512)
488 3vps_A TUNA, NAD-dependent epi 53.8 23 0.00077 33.3 6.5 100 234-352 4-119 (321)
489 1rp0_A ARA6, thiazole biosynth 53.7 11 0.00037 36.0 4.3 36 236-283 38-74 (284)
490 1rsg_A FMS1 protein; FAD bindi 53.6 9.2 0.00032 39.6 4.0 25 235-259 6-30 (516)
491 3gg2_A Sugar dehydrogenase, UD 53.5 22 0.00074 37.1 6.8 96 232-354 313-421 (450)
492 3g3e_A D-amino-acid oxidase; F 53.5 13 0.00045 36.0 4.8 38 239-282 2-39 (351)
493 3p19_A BFPVVD8, putative blue 53.4 19 0.00065 34.1 5.9 81 232-327 11-97 (266)
494 4dna_A Probable glutathione re 53.4 11 0.00036 38.7 4.4 33 237-281 5-37 (463)
495 3fr7_A Putative ketol-acid red 53.3 32 0.0011 37.1 8.1 27 235-261 51-78 (525)
496 3un1_A Probable oxidoreductase 53.3 42 0.0014 31.5 8.3 75 235-328 26-107 (260)
497 3ak4_A NADH-dependent quinucli 53.2 18 0.0006 33.8 5.6 37 234-281 9-45 (263)
498 2rgh_A Alpha-glycerophosphate 53.1 12 0.0004 40.0 4.8 34 237-282 32-65 (571)
499 2yg5_A Putrescine oxidase; oxi 53.1 13 0.00043 37.4 4.8 34 237-282 5-38 (453)
500 2fwm_X 2,3-dihydro-2,3-dihydro 53.0 55 0.0019 30.2 8.9 76 234-327 4-84 (250)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=1.7e-188 Score=1492.40 Aligned_cols=494 Identities=53% Similarity=0.943 Sum_probs=486.5
Q ss_pred ChhhhcccCCchhHHHHHHHHHHhhHHHHHHHhhcCcccccccccccchhHHHHHHhhhhcCCCcceecccCchhHHHHH
Q 010939 1 MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVL 80 (497)
Q Consensus 1 ~~~~~~~~~~~l~k~~~L~~L~~~N~~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l 80 (497)
+|+||++++++|+||+||++||+|||+||||++.+|++|+|||+||||||++|++||++||+|+|+|+|++|+|++++++
T Consensus 46 ~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l 125 (555)
T 1gq2_A 46 ILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATML 125 (555)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHH
T ss_pred HHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCceEEEEecCceeeccCCCCCcccccchhhHHHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcc
Q 010939 81 RNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAI 160 (497)
Q Consensus 81 ~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~ 160 (497)
+|||.++|++||||||||||||||+|++||+||+||++|||+||||||++|||||||+|||||+||+||+||||||+|++
T Consensus 126 ~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~ 205 (555)
T 1gq2_A 126 QSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIR 205 (555)
T ss_dssp HTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCC
T ss_pred hcCCCCCcEEEEEEccccccccCCCCCCccccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHcCCCCceecCccchhHHHHHHHHHHHHHhCCCCCCceE
Q 010939 161 GQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRF 240 (497)
Q Consensus 161 g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d~ri 240 (497)
|++|++|+||||++|+++|||+++||||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+||||
T Consensus 206 g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~ri 285 (555)
T 1gq2_A 206 GQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTV 285 (555)
T ss_dssp THHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCE
T ss_pred hHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcE
Q 010939 241 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTI 320 (497)
Q Consensus 241 v~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptv 320 (497)
||+|||+||+|||+||+++|+++ |+|+|||++||||||++|||+++|. +|+++|++||++.++.++|+|||+.+||||
T Consensus 286 v~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~v 363 (555)
T 1gq2_A 286 LFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRIWMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTV 363 (555)
T ss_dssp EEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTEEEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSE
T ss_pred EEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcEEEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCE
Confidence 99999999999999999999985 9999999999999999999999995 599999999998777789999999999999
Q ss_pred EEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcccc-CCeeeCCCCcccc
Q 010939 321 LIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNA 399 (497)
Q Consensus 321 LIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~-~G~~~~p~Q~NN~ 399 (497)
|||+|+++|+|||||||+|++||+|||||||||||+++||+||||++||+|+|||||||||+||+| +||+++|||+||+
T Consensus 364 lIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~ 443 (555)
T 1gq2_A 364 LIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNS 443 (555)
T ss_dssp EEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGG
T ss_pred EEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccce
Confidence 999999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccchhhhHHHHHcCCcccCHHHHHHHHHHHhccCCccCCCCCCccCCCCCcchhhHHHHHHHHHHHHHcCCCCCCCCchh
Q 010939 400 YIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKD 479 (497)
Q Consensus 400 ~iFPGiglG~i~~~a~~itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~AVa~~A~~~GlA~~~~~p~d 479 (497)
|+|||||||+++++|++|||+|+++||+|||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+..+.|+|
T Consensus 444 liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d 523 (555)
T 1gq2_A 444 YVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPED 523 (555)
T ss_dssp GTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCCHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSS
T ss_pred eeccchhhhhHhcCCeECCHHHHHHHHHHHHhccccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988777899
Q ss_pred HHHHHHhCCcccCCCCC
Q 010939 480 LVKYAESCMYSPAYRTY 496 (497)
Q Consensus 480 ~~~~i~~~mw~P~Y~~~ 496 (497)
+.+|++++||+|+|+++
T Consensus 524 ~~~~i~~~~~~P~Y~~~ 540 (555)
T 1gq2_A 524 LEAFIRSQVYSTDYNCF 540 (555)
T ss_dssp HHHHHHTTSCCCSCCCC
T ss_pred HHHHHHHhccCCCCCCc
Confidence 99999999999999987
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.4e-187 Score=1489.18 Aligned_cols=495 Identities=51% Similarity=0.932 Sum_probs=486.5
Q ss_pred ChhhhcccCCchhHHHHHHHHHHhhHHHHHHHhhcCcccccccccccchhHHHHHHhhhhcCCCcceecccCchhHHHHH
Q 010939 1 MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVL 80 (497)
Q Consensus 1 ~~~~~~~~~~~l~k~~~L~~L~~~N~~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l 80 (497)
+|+||++++++|+||+||++||+|||+||||++.+|++|+|||+||||||++|++||+|||+|+|+|+|++|+++++++|
T Consensus 48 ~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l 127 (564)
T 1pj3_A 48 FHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIV 127 (564)
T ss_dssp HHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHH
T ss_pred HHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCceEEEEecCceeeccCCCCCcccccchhhHHHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcc
Q 010939 81 RNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAI 160 (497)
Q Consensus 81 ~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~ 160 (497)
+|||.++|++||||||||||||||+|++||+||+||++|||+||||||++|||||||+|||||+||+||+||||||+|++
T Consensus 128 ~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~ 207 (564)
T 1pj3_A 128 DNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDR 207 (564)
T ss_dssp TTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCC
T ss_pred HhCCCCCceEEEEEcccccccCCCCCCCcccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHcCCCCceecCccchhHHHHHHHHHHHHHhCCCCCCceE
Q 010939 161 GQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRF 240 (497)
Q Consensus 161 g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d~ri 240 (497)
|++|++|+||||++|+++|||+++||||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+||||
T Consensus 208 g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~ri 287 (564)
T 1pj3_A 208 TQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKI 287 (564)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCE
T ss_pred hhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC--CCHHHHHhccCC
Q 010939 241 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAIKP 318 (497)
Q Consensus 241 v~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~v~~vkp 318 (497)
||+|||+||+|||+||+++|++ +|+|+|||++||||||++|||+++|.++|+++|++||++.++. ++|+|||+.+||
T Consensus 288 v~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp 366 (564)
T 1pj3_A 288 LFLGAGEAALGIANLIVMSMVE-NGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKP 366 (564)
T ss_dssp EEECCSHHHHHHHHHHHHHHHH-TTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCC
T ss_pred EEeCCCHHHHHHHHHHHHHHHH-cCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCC
Confidence 9999999999999999999998 5999999999999999999999999435999999999987766 799999999999
Q ss_pred cEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcccc-CCeeeCCCCcc
Q 010939 319 TILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQAN 397 (497)
Q Consensus 319 tvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~-~G~~~~p~Q~N 397 (497)
|||||+|+++|+|||||||+|+++|+|||||||||||+++||+||||++||+|+|||||||||+||+| +||+++|||+|
T Consensus 367 ~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~N 446 (564)
T 1pj3_A 367 STIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGN 446 (564)
T ss_dssp SEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECC
T ss_pred CEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccchhhhHHHHHcCCcccCHHHHHHHHHHHhccCCccCCCCCCccCCCCCcchhhHHHHHHHHHHHHHcCCCCCCCCc
Q 010939 398 NAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPP 477 (497)
Q Consensus 398 N~~iFPGiglG~i~~~a~~itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~AVa~~A~~~GlA~~~~~p 477 (497)
|+|+|||||||+++++|++|||+|+++||+|||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+..+.|
T Consensus 447 N~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~ 526 (564)
T 1pj3_A 447 NVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEP 526 (564)
T ss_dssp GGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTTCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCC
T ss_pred eeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887888
Q ss_pred hhHHHHHHhCCcccCCCCC
Q 010939 478 KDLVKYAESCMYSPAYRTY 496 (497)
Q Consensus 478 ~d~~~~i~~~mw~P~Y~~~ 496 (497)
+|+.+|++++||+|.|+++
T Consensus 527 ~d~~~~i~~~~~~p~Y~~~ 545 (564)
T 1pj3_A 527 EDKAKYVKERTWRSEYDSL 545 (564)
T ss_dssp SSHHHHHHHTCCCCSCCCC
T ss_pred HHHHHHHHHHhhCCCCCCc
Confidence 9999999999999999987
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=9.5e-188 Score=1494.30 Aligned_cols=494 Identities=48% Similarity=0.877 Sum_probs=486.6
Q ss_pred ChhhhcccCCchhHHHHHHHHHHhhHHHHHHHhhcCcccccccccccchhHHHHHHhhhhcCCCcceecccCc--hhHHH
Q 010939 1 MLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDK--GKVLE 78 (497)
Q Consensus 1 ~~~~~~~~~~~l~k~~~L~~L~~~N~~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~--g~i~~ 78 (497)
+|.||++++++|+||+||++||+|||+||||++.+|++|+|||+||||||++|++||+|||+|+|+|+|++|+ |++++
T Consensus 82 ~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyrll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~ 161 (605)
T 1o0s_A 82 VITKLREQPNDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQ 161 (605)
T ss_dssp HHHHHHHSSSHHHHHHHHHHHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHH
T ss_pred HHHHHHcCCCcHHHHHHHHHhhcccchhhhhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHhhCCCCCceEEEEecCceeeccCCCCCcccccchhhHHHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccC
Q 010939 79 VLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKR 158 (497)
Q Consensus 79 ~l~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R 158 (497)
+++|||.++|++||||||||||||||+|++||+||+||++|||+||||||++|||||||+|||||+||+||+||||||+|
T Consensus 162 ~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~R 241 (605)
T 1o0s_A 162 ILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKR 241 (605)
T ss_dssp HHTTSSCSCCCEEEEECSSCBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCC
T ss_pred HHhcCCCCCceEEEEEccccceecCCCCCCcCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHcCCCCceecCccchhHHHHHHHHHHHHHhCCCCCCc
Q 010939 159 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQ 238 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d~ 238 (497)
++|++|++|+||||++|+++|||+++||||||+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+||
T Consensus 242 v~g~~Yd~fvdefv~av~~~fGp~~~I~~EDf~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~ 321 (605)
T 1o0s_A 242 VRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQE 321 (605)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred CChHHHHHHHHHHHHHHHHHhCCCcEeeHhhcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKP 318 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkp 318 (497)
||||+|||+||+|||+||+++|++ +|+|+|||++||||||++|||+++|. +|+++|++||++.++.++|+|||+.+||
T Consensus 322 riv~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp 399 (605)
T 1o0s_A 322 KYLFFGAGAASTGIAEMIVHQMQN-EGISKEEACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARP 399 (605)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHT-TTCCHHHHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCC
T ss_pred EEEEECCCHHHHHHHHHHHHHHHH-cCCChhhhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCC
Confidence 999999999999999999999998 59999999999999999999999995 5999999999987777899999999999
Q ss_pred cEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeeeCCCCccc
Q 010939 319 TILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANN 398 (497)
Q Consensus 319 tvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~~~p~Q~NN 398 (497)
|||||+|+++|+|||||||+|+++|+|||||||||||+++||+||||++||+|+|||||||||+||+|+||+++|||+||
T Consensus 400 dVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN 479 (605)
T 1o0s_A 400 GALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNN 479 (605)
T ss_dssp SEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCG
T ss_pred CEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHcCCcccCHHHHHHHHHHHhccCCccCCCCCCccCCCCCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Q 010939 399 AYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPK 478 (497)
Q Consensus 399 ~~iFPGiglG~i~~~a~~itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~AVa~~A~~~GlA~~~~~p~ 478 (497)
+|+|||||||+++++|++|||+|+++||+|||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+..+.|+
T Consensus 480 ~liFPGi~lGal~~~A~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~ 559 (605)
T 1o0s_A 480 AYIFPGVALGTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPE 559 (605)
T ss_dssp GGTHHHHHHHHHHHTBSCCCHHHHHHHHHHHHHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCS
T ss_pred eeeccchhhhhhhcCCeEcCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998878889
Q ss_pred hHHHHHHhCCcccCCCCC
Q 010939 479 DLVKYAESCMYSPAYRTY 496 (497)
Q Consensus 479 d~~~~i~~~mw~P~Y~~~ 496 (497)
|+.+|++++||+|+|+++
T Consensus 560 d~~~~i~~~~w~P~Y~~~ 577 (605)
T 1o0s_A 560 DLEKYVRAQVYNTEYEEL 577 (605)
T ss_dssp CHHHHHHHHSCCCSCCCC
T ss_pred HHHHHHHHhccCCCCCcc
Confidence 999999999999999987
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.2e-122 Score=970.95 Aligned_cols=379 Identities=30% Similarity=0.418 Sum_probs=344.1
Q ss_pred cccccccccchhHHHHHHhhhhcCCCcceecccCchhHHHHHhhCCCCCceEEEEecCceeeccCCCCC-cccccchhhH
Q 010939 39 ELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC-HGMGIPVGKL 117 (497)
Q Consensus 39 e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~-~gm~I~~GKl 117 (497)
+.||++||||||++|++|+ +|++++++++.+| ++|||||||||||||||+|+ +||||||||+
T Consensus 59 ~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeGKl 121 (487)
T 3nv9_A 59 NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEGKA 121 (487)
T ss_dssp GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHHHH
T ss_pred HHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhhHH
Confidence 4599999999999999986 4667777666555 69999999999999999999 5999999999
Q ss_pred HHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHH
Q 010939 118 SLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD 197 (497)
Q Consensus 118 ~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~ 197 (497)
+|||+||||| |||||||+||+| +++|| ++|+ |||+++.++||. ||||||++||||+
T Consensus 122 ~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~ap~af~ 177 (487)
T 3nv9_A 122 LLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQPNCYK 177 (487)
T ss_dssp HHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCTTHHHH
T ss_pred HHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhcCCchHHH
Confidence 9999999999 999999999754 45663 3333 566666667766 9999999999999
Q ss_pred HHHHHcC--CCCceecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 010939 198 LLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 275 (497)
Q Consensus 198 iL~ryr~--~~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i 275 (497)
||+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+|+ +||
T Consensus 178 il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~i 248 (487)
T 3nv9_A 178 ILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KKI 248 (487)
T ss_dssp HHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GGE
T ss_pred HHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----ccE
Confidence 9999998 799999999999999999999999999999999999999999999999999985 49986 899
Q ss_pred EEEccCCcccCCCccCC-----chhchhhhcccC--CCCCHHHHHhccCCcEEEEccCC-CCCCCHHHHHHHHccCCCce
Q 010939 276 WLVDSKGLIVSSRLESL-----QHFKKPWAHEHE--PVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKPI 347 (497)
Q Consensus 276 ~~vD~~GLi~~~r~~~l-----~~~k~~~a~~~~--~~~~L~e~v~~vkptvLIG~S~~-~g~Fteevi~~Ma~~~~rPI 347 (497)
||||++|||+++|.+ | +++|.+||++.. ...+|+|+|++ +|||||+|++ +|+|||||||+|+ +|||
T Consensus 249 ~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~PI 322 (487)
T 3nv9_A 249 VMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKPI 322 (487)
T ss_dssp EEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSCE
T ss_pred EEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCCE
Confidence 999999999999953 6 346678888653 46799999998 7999999976 7999999999996 8999
Q ss_pred EEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeeeCCCCccccccchhhhHHHHHcCCcccCHHHHHHHHH
Q 010939 348 IFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAE 427 (497)
Q Consensus 348 IFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~m~~aAA~ 427 (497)
|||||||| |||+||||++ +|+|||||| |+++|||+||+|+|||||||+++++|++|||+|+++||+
T Consensus 323 IFaLSNPt--pEi~pe~A~~--~G~aIvATG----------rsd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA~ 388 (487)
T 3nv9_A 323 VFCCANPV--PEIYPYEAKE--AGAYIVATG----------RGDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAASR 388 (487)
T ss_dssp EEECCSSS--CSSCHHHHHH--TTCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred EEECCCCC--ccCCHHHHHH--hCCEEEEEC----------CCCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHHH
Confidence 99999999 7999999998 599999999 578899999999999999999999999999999999999
Q ss_pred HHhccCCccCCCCCCccCCCCCcchhhHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 010939 428 ALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRL-PPPKDLVKYAESCM 488 (497)
Q Consensus 428 aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~AVa~~A~~~GlA~~~-~~p~d~~~~i~~~m 488 (497)
+||++++++++.+++|||++++ ++||.+||.||+++|+++|+|+.. ++++++.++++++|
T Consensus 389 ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 389 ALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999 799999999999999999999976 67888999988765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=2.7e-114 Score=897.82 Aligned_cols=360 Identities=28% Similarity=0.426 Sum_probs=332.6
Q ss_pred HHHHHhhcCcccccccccccchhHHHHHHhhhhcCCCcceecccCchhHHHHHhhCCCCCceEEEEecCceeeccCCCCC
Q 010939 28 LFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC 107 (497)
Q Consensus 28 Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~ 107 (497)
+++++..++.|+ |||+||||||++|++|++ |+++++ +|+.++++|+|||||||||||||+|+
T Consensus 24 ~~~~~~~~~~~~-l~i~YtP~V~~~c~~i~~-------------~p~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G~ 85 (398)
T 2a9f_A 24 VQPKVDIKTKHD-LSIAYTPGVASVSSAIAK-------------DKTLAY----DLTTKKNTVAVISDGTAVLGLGDIGP 85 (398)
T ss_dssp EEESSCCSSHHH-HHHHSTTTTHHHHHHHHH-------------CGGGHH----HHSGGGTEEEEEECSSSCTTSCCCCH
T ss_pred EEEecccCCHHH-CeEEECchHHHHHHHHHh-------------CHHHHH----HhcccCCEEEEEECCccccCCCCccc
Confidence 456666676554 899999999999999863 445555 68999999999999999999999999
Q ss_pred c-ccccchhhHHHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcchhhhHHHHHHHHHHHHHhhCCC-cce
Q 010939 108 H-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILI 185 (497)
Q Consensus 108 ~-gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~lI 185 (497)
+ |||||+||+.||++||||| |+|||||+|| +||||+++++.| |. +.|
T Consensus 86 ~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~I 134 (398)
T 2a9f_A 86 EAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGGI 134 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSEE
T ss_pred ccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeEe
Confidence 8 9999999999999999999 9999999996 799999999988 77 889
Q ss_pred eeecCCCCcHHHHHHHHcCC--CCceecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHh
Q 010939 186 QFEDFANHNAFDLLEKYGTT--HLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 263 (497)
Q Consensus 186 ~~EDf~~~~af~iL~ryr~~--~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~ 263 (497)
|||||++||||++|+|||++ ||||||||||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 135 ~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~---- 210 (398)
T 2a9f_A 135 NLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA---- 210 (398)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH----
T ss_pred ccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc----
Confidence 99999999999999999984 999999999999999999999999999999999999999999999999999875
Q ss_pred cCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHH
Q 010939 264 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMA 340 (497)
Q Consensus 264 ~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma 340 (497)
|. +|||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|+|||+|+ +|+||+|+|++|+
T Consensus 211 -Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~Ma 280 (398)
T 2a9f_A 211 -GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKMA 280 (398)
T ss_dssp -TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTSC
T ss_pred -CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhhC
Confidence 74 899999999999999933599999999997543 4689999998 899999999 8999999999998
Q ss_pred ccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeeeCCCCccccccchhhhHHHHHcCCcccCHH
Q 010939 341 SLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDD 420 (497)
Q Consensus 341 ~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~ 420 (497)
++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|++|||+
T Consensus 281 ---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d~ 343 (398)
T 2a9f_A 281 ---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITVE 343 (398)
T ss_dssp ---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCHH
T ss_pred ---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCHH
Confidence 899999999999 89999999999 99999998 78999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCccCCCCCCccCCCCCcchhhHHHHHHHHHHHHHc
Q 010939 421 MLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYEL 468 (497)
Q Consensus 421 m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~AVa~~A~~~ 468 (497)
|+++||+|||++++++++.+++|||++++ ++||.+||.||+++|+++
T Consensus 344 m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~ 390 (398)
T 2a9f_A 344 MQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKS 390 (398)
T ss_dssp HHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC--
T ss_pred HHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 999999999999999764
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=3.9e-109 Score=857.94 Aligned_cols=354 Identities=28% Similarity=0.435 Sum_probs=331.0
Q ss_pred HHHHHHhhcCcccccccccccchhHHHHHHhhhhcCCCcceecccCchhHHHHHhhCCCCCceEEEEecCceeeccCCCC
Q 010939 27 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 106 (497)
Q Consensus 27 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG 106 (497)
..++++..+|.|+ |||+||||||++|++|+ ++|+ +++ +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~----------~v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPE----------KTY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGG----------GHH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHH----------HHH----hhcccCCeEEEEECCccccCCCccc
Confidence 4567778888777 89999999999999986 4554 444 6899999999999999999999999
Q ss_pred Cc-ccccchhhHHHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcchhhhHHHHHHHHHHHHHhhCCC-cc
Q 010939 107 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-IL 184 (497)
Q Consensus 107 ~~-gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~l 184 (497)
++ |||||+||+.||++||||| ++|||||+|| +||||+++++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 799999999988 77 88
Q ss_pred eeeecCCCCcHHHHHHHHcC--CCCceecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 010939 185 IQFEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISK 262 (497)
Q Consensus 185 I~~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~ 262 (497)
||||||+++|||++|+|||+ +||||||||||||+|++||++||+|++|++|+++||||+|||+||+++|++|+..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccC-CchhchhhhcccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHH
Q 010939 263 QTNMPLEETRKKIWLVDSKGLIVSSRLES-LQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEA 338 (497)
Q Consensus 263 ~~G~s~eeA~~~i~~vD~~GLi~~~r~~~-l~~~k~~~a~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~ 338 (497)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|+|+|+. +|+|||+|+ +|+||+|+|++
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999543 99999999987543 4689999998 999999999 79999999999
Q ss_pred HHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeeeCCCCccccccchhhhHHHHHcCCcccC
Q 010939 339 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVH 418 (497)
Q Consensus 339 Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~it 418 (497)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 97 899999999999 99999999999 99999998 789999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhccCCccCCCCCCccCCCCCcchhhHHHHHHHHHHH
Q 010939 419 DDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKA 465 (497)
Q Consensus 419 d~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~AVa~~A 465 (497)
|+|+++||++||+++ ++.+++|||++++ ++||.+||.||+++|
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999999999 7788999999999 999999999999865
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=7e-88 Score=710.20 Aligned_cols=383 Identities=30% Similarity=0.435 Sum_probs=347.1
Q ss_pred HHHHhhcCcccccccccccchhHHHHHHhhhhcCCCcceecccCchhHHHHHhhCCCCCceEEEEecCceeeccCCCCCc
Q 010939 29 FYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH 108 (497)
Q Consensus 29 fy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~ 108 (497)
++++..++.+ +|||+||||||++|++|++ |++++++ ||.++++++|||||+|||||||+|.+
T Consensus 23 ~~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~h 84 (439)
T 2dvm_A 23 IPKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGPL 84 (439)
T ss_dssp EESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCHH
T ss_pred EEeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEecccceecc
Confidence 3445555655 5899999999999999973 6777774 88899999999999999999999997
Q ss_pred -ccccchhhHHHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcchhhhHHHHHHHHHHHHHhhCCC-ccee
Q 010939 109 -GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILIQ 186 (497)
Q Consensus 109 -gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~lI~ 186 (497)
++|+++||+.||++||||| ++|++||+.. +|+|+++++..| |+ ..||
T Consensus 85 S~sPvmh~ka~lf~~~gGid---~~yi~ldv~d---------------------------~de~~~~v~~l~-~~f~Gin 133 (439)
T 2dvm_A 85 AGLPVMEGKALLFKRFGGVD---AFPIMIKEQE---------------------------PNKFIDIVKAIA-PTFGGIN 133 (439)
T ss_dssp HHHHHHHHHHHHHHHHHCCE---EEEEECSCCS---------------------------HHHHHHHHHHTG-GGCSEEE
T ss_pred ccCHHHHHHHHHHHHhCCCC---CeeeeeecCC---------------------------HHHHHHHHHHhC-ccCcEEE
Confidence 8999999999999999999 9999999931 577877777755 44 5699
Q ss_pred eecCCCCcHHHHHHHHcC--CCCceecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhc
Q 010939 187 FEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQT 264 (497)
Q Consensus 187 ~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~ 264 (497)
||||+.||||++|++|++ ++||||||+||||.+.++|+++|++..|++|+++|+||+|||+||.+|+.+|.+.
T Consensus 134 vED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~----- 208 (439)
T 2dvm_A 134 LEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA----- 208 (439)
T ss_dssp ECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT-----
T ss_pred EEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc-----
Confidence 999999999999999997 7999999999999999999999999999999999999999999999999999863
Q ss_pred CCChhhhcCeEEEEc----cCCcccCCCccC---CchhchhhhcccC---CCCCHHHHHhccCCcEEEEccCCC-CCCCH
Q 010939 265 NMPLEETRKKIWLVD----SKGLIVSSRLES---LQHFKKPWAHEHE---PVKELVDAVNAIKPTILIGTSGQG-RTFTK 333 (497)
Q Consensus 265 G~s~eeA~~~i~~vD----~~GLi~~~r~~~---l~~~k~~~a~~~~---~~~~L~e~v~~vkptvLIG~S~~~-g~Fte 333 (497)
|+++ ++||++| |+||+++.. . +.++|.+|++... ...+|.|+++. +|+|||+|+.+ |+|++
T Consensus 209 G~~~----~~I~vvd~~~~R~G~~~~a~--~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~~ 280 (439)
T 2dvm_A 209 GVKP----ENVRVVELVNGKPRILTSDL--DLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIKP 280 (439)
T ss_dssp TCCG----GGEEEEEEETTEEEECCTTS--CHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSCH
T ss_pred CCCc----CeEEEEEccCCCcCcccccc--chhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCCh
Confidence 8753 7899999 999998872 4 7888889987543 25689999987 99999999985 89999
Q ss_pred HHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeeeCCCCccccccchhhhHHHHHcC
Q 010939 334 EVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSG 413 (497)
Q Consensus 334 evi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~ 413 (497)
++++.|+ ++||||+||||+ +||++++|++| |++++||| +++.|+|+||+|+|||||+|+++++
T Consensus 281 e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~~~ 343 (439)
T 2dvm_A 281 QWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALDVR 343 (439)
T ss_dssp HHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHHTT
T ss_pred HHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHhcC
Confidence 9999986 899999999999 99999999998 89999998 7899999999999999999999999
Q ss_pred CcccCHHHHHHHHHHHhccCCccCCCCCCccCCCCCcchhhHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCC
Q 010939 414 AIRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 493 (497)
Q Consensus 414 a~~itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~AVa~~A~~~GlA~~~~~p~d~~~~i~~~mw~P~Y 493 (497)
|++|||+|+++||++||++++++ ..++|||++++ ++||.+||.||+++|+++|+|+..+.|+|+.+|++++||.+.|
T Consensus 344 a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~~~ 420 (439)
T 2dvm_A 344 ARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYEN 420 (439)
T ss_dssp CSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhhHH
Confidence 99999999999999999999876 78999999999 9999999999999999999998777789999999999998764
No 8
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.93 E-value=3.8e-09 Score=111.51 Aligned_cols=130 Identities=17% Similarity=0.187 Sum_probs=106.1
Q ss_pred CCCCce----------ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 010939 204 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 273 (497)
Q Consensus 204 ~~~~~F----------nDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~ 273 (497)
..+|+| +|++.||+.+++++++. .++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 589999 89999999999999965 569999999999999999999999998653 63
Q ss_pred eEEEEccCCcccCCCccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC
Q 010939 274 KIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 274 ~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+++++|++. .+...|.. .....+|.|+++. .|+++.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 688888742 11111211 1123589999987 99999988888899999999996 889999999
Q ss_pred CCCCCCCCCHHHHhc
Q 010939 353 NPTSQSECTAEEAYT 367 (497)
Q Consensus 353 NPt~~~E~~peda~~ 367 (497)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 998 8999988765
No 9
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.89 E-value=1.5e-08 Score=106.95 Aligned_cols=169 Identities=12% Similarity=0.188 Sum_probs=124.5
Q ss_pred CcchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHH-------HH--------------HHHc-------CCCCce
Q 010939 158 RAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD-------LL--------------EKYG-------TTHLVF 209 (497)
Q Consensus 158 R~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~-------iL--------------~ryr-------~~~~~F 209 (497)
-.+.+||+..++..+.. ..++|+.+| |-+..=... ++ .||+ ..+|+|
T Consensus 111 g~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi 185 (435)
T 3gvp_A 111 GESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAM 185 (435)
T ss_dssp TCCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEE
T ss_pred CCCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEE
Confidence 34667888888876642 345676554 333321111 11 3443 269999
Q ss_pred ----------ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 010939 210 ----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 279 (497)
Q Consensus 210 ----------nDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD 279 (497)
+|+++||+-++++|+..+ ++..|.+.+++|+|+|..|.++|..+... |. +++++|
T Consensus 186 ~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D 250 (435)
T 3gvp_A 186 NVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTE 250 (435)
T ss_dssp ECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred EecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEe
Confidence 899999999999999765 68999999999999999999999988643 64 588888
Q ss_pred cCCcccCCCccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCC
Q 010939 280 SKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQS 358 (497)
Q Consensus 280 ~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~ 358 (497)
++.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .
T Consensus 251 ~dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~ 311 (435)
T 3gvp_A 251 IDPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--T 311 (435)
T ss_dssp SCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--T
T ss_pred CChh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--c
Confidence 7531 1111211 1123579999987 99999998888899999999996 789999999997 8
Q ss_pred CCCHHHH
Q 010939 359 ECTAEEA 365 (497)
Q Consensus 359 E~~peda 365 (497)
|++.+..
T Consensus 312 EId~~~L 318 (435)
T 3gvp_A 312 EIDVASL 318 (435)
T ss_dssp TBTGGGG
T ss_pred cCCHHHH
Confidence 8887665
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.38 E-value=1.4e-07 Score=98.16 Aligned_cols=216 Identities=17% Similarity=0.225 Sum_probs=129.9
Q ss_pred CchhHHHHHhhCCCCCceEEEEecCceeeccCCCCCc--ccccchhhHHHHhhhcCCCCCceeeEEeccCCCccccccCc
Q 010939 72 DKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDE 149 (497)
Q Consensus 72 d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~--gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp 149 (497)
++..++++.+ .+.+|+|.|+++..+|++|.+.. |+.|+.+ ..+|. | +++|.+.+-.
T Consensus 26 tP~~v~~L~~----~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLK----LGFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHH----CCCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC-------
Confidence 4556666665 35689999999999999999975 8999988 66765 2 5677665311
Q ss_pred ccccccccCcchhhhHHHHHHHHHHHHH---hhCCCcceeeecCCCCcHHHHHHHHc-CCCCcee-cCc------c----
Q 010939 150 FYIGLRQKRAIGQEYAELLHEFMTAVKQ---NYGERILIQFEDFANHNAFDLLEKYG-TTHLVFN-DDI------Q---- 214 (497)
Q Consensus 150 ~YlG~r~~R~~g~~y~~~vdefv~av~~---~fGp~~lI~~EDf~~~~af~iL~ryr-~~~~~Fn-DDi------Q---- 214 (497)
.+.++.+++ .|+- +|.++ ++. .+++++ ..+++|+ +.+ |
T Consensus 84 -------------------~~~i~~l~~~~~li~~---~~~~~--d~~---~~~al~~~gI~v~~~e~v~~~~~a~~l~~ 136 (401)
T 1x13_A 84 -------------------DDEIALLNPGTTLVSF---IWPAQ--NPE---LMQKLAERNVTVMAMDSVPRISRAQSLDA 136 (401)
T ss_dssp -------------------HHHHTTCCTTCEEEEC---CCGGG--CHH---HHHHHHHTTCEEEEGGGCCCSGGGGGGCH
T ss_pred -------------------HHHHHHhcCCCcEEEE---ecCCC--CHH---HHHHHHHCCCEEEEeehhhhhhhhcccch
Confidence 233333322 1111 22222 222 333333 4666663 222 2
Q ss_pred chhHHHHHHHHHHHHH----hCC----------CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 010939 215 GTASVVLAGLISAMKF----LGG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 280 (497)
Q Consensus 215 GTa~V~lAgll~Al~~----~g~----------~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~ 280 (497)
.+....+|| .+|++. .++ .+...||+|+|+|.+|.+++.++... |. +++++|+
T Consensus 137 l~~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~ 203 (401)
T 1x13_A 137 LSSMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDT 203 (401)
T ss_dssp HHHHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred HHHHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcC
Confidence 455555555 333333 222 25688999999999999999887642 62 5899998
Q ss_pred CCcccCCCccCCch------------hchhhhcccCC------CCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHH
Q 010939 281 KGLIVSSRLESLQH------------FKKPWAHEHEP------VKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVE 337 (497)
Q Consensus 281 ~GLi~~~r~~~l~~------------~k~~~a~~~~~------~~~L~e~v~~vkptvLIG~S~~-----~g~Fteevi~ 337 (497)
+.-..+.. +.+.. .+..|++...+ ..+|.+.++. .|++|++... +.+++++.++
T Consensus 204 ~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~ 280 (401)
T 1x13_A 204 RPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVD 280 (401)
T ss_dssp CGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHH
T ss_pred CHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHh
Confidence 74321110 00100 00012211100 0147788876 9999999533 3679999999
Q ss_pred HHHccCCCceEEecCCCC
Q 010939 338 AMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 338 ~Ma~~~~rPIIFaLSNPt 355 (497)
.|. +..+|+-+|+|.
T Consensus 281 ~mk---~g~vIVdva~~~ 295 (401)
T 1x13_A 281 SMK---AGSVIVDLAAQN 295 (401)
T ss_dssp TSC---TTCEEEETTGGG
T ss_pred cCC---CCcEEEEEcCCC
Confidence 996 788999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.03 E-value=2.5e-05 Score=83.00 Aligned_cols=129 Identities=17% Similarity=0.188 Sum_probs=98.8
Q ss_pred CCCCce----------ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 010939 204 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 273 (497)
Q Consensus 204 ~~~~~F----------nDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~ 273 (497)
..+|+| .|+..||+-.++.|+. |.++..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 379999 6778999999988885 5679999999999999999999999988642 63
Q ss_pred eEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC
Q 010939 274 KIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 274 ~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+++++|++.. ....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 6888776421 111111 11123579999987 99999988878899999999996 788888888
Q ss_pred CCCCCCCCCHHHHh
Q 010939 353 NPTSQSECTAEEAY 366 (497)
Q Consensus 353 NPt~~~E~~peda~ 366 (497)
+.. .|++.+...
T Consensus 335 Rgd--vEID~~aL~ 346 (464)
T 3n58_A 335 HFD--NEIQVAALR 346 (464)
T ss_dssp SST--TTBTCGGGT
T ss_pred CCC--cccCHHHHH
Confidence 876 666665443
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.01 E-value=1.3e-05 Score=85.73 Aligned_cols=132 Identities=17% Similarity=0.218 Sum_probs=100.8
Q ss_pred CCCCce----------ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 010939 204 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 273 (497)
Q Consensus 204 ~~~~~F----------nDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~ 273 (497)
..+|+| .|+++||+..++.++. |.++..|.+.+++|.|+|..|.++|..+.. .| -
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~G-------A 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AG-------A 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------C
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CC-------C
Confidence 379999 7899999999999886 788999999999999999888888888765 37 2
Q ss_pred eEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 274 KIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 274 ~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
+++++|++.. + ... .+...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~----Aa~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQ----ATMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHH----HHHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHH----HHHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 7888887521 0 000 01111122456677765 89999988888899999999985 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 010939 354 PTSQSECTAEEAYTW 368 (497)
Q Consensus 354 Pt~~~E~~peda~~~ 368 (497)
+. .|++.++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.53 E-value=0.001 Score=68.28 Aligned_cols=229 Identities=15% Similarity=0.136 Sum_probs=124.7
Q ss_pred CchhHHHHHhhCCCCCceEEEEecCceeeccCCCCCc--ccccchhhHHHHhhhcCCCCCceeeEEeccCCC-----ccc
Q 010939 72 DKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTN-----NEK 144 (497)
Q Consensus 72 d~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~--gm~I~~GKl~Ly~a~gGi~P~~~lPi~LDvgtn-----n~~ 144 (497)
++..++++.+ .+.+|+|.++++...|+.|..-. |..|+.++..++ ++.| ++|.+.+- +++
T Consensus 19 ~P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~ 85 (384)
T 1l7d_A 19 SPEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTD 85 (384)
T ss_dssp CHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCC
T ss_pred CHHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHH
Confidence 3455666655 36789999999999999998865 888888877666 3333 56655432 111
Q ss_pred c---c-cCcccccccccCcchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHcCCCCceecCccchhHHH
Q 010939 145 L---L-DDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVV 220 (497)
Q Consensus 145 L---l-~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~FnDDiQGTa~V~ 220 (497)
. + ..-.+++.-|.-. + .+.++++.++ |- .++.+|-+....+ ...+++|+ ....
T Consensus 86 ~i~~l~~~~~~i~~~~~~~-----~---~~~~~~~~~~-gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~ 142 (384)
T 1l7d_A 86 EVALIKEGAVLMCHLGALT-----N---RPVVEALTKR-KI-TAYAMELMPRISR-------AQSMDILS------SQSN 142 (384)
T ss_dssp GGGGSCTTCEEEEECCGGG-----C---HHHHHHHHHT-TC-EEEEGGGCCCSGG-------GGGGCHHH------HHHH
T ss_pred HHHhhccCCEEEEEecccC-----C---HHHHHHHHHC-CC-EEEEecccccccc-------ccccchhh------HHHH
Confidence 1 1 1233334333311 1 1112233221 11 2233332221100 00222222 1112
Q ss_pred HH---HHHHHHHHhCC----------CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCC
Q 010939 221 LA---GLISAMKFLGG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS 287 (497)
Q Consensus 221 lA---gll~Al~~~g~----------~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~ 287 (497)
+| +++.+.+..++ .+...|++|+|+|.+|.+++..+.. .|. +++++|++.--.+.
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAATKEQ 210 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCSTTHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHHHHHH
Confidence 22 55666666553 5788999999999999999988754 362 49999986321000
Q ss_pred CccCCc-------h-------hchhhhcccC------CCCCHHHHHhccCCcEEEEcc---C--CCCCCCHHHHHHHHcc
Q 010939 288 RLESLQ-------H-------FKKPWAHEHE------PVKELVDAVNAIKPTILIGTS---G--QGRTFTKEVVEAMASL 342 (497)
Q Consensus 288 r~~~l~-------~-------~k~~~a~~~~------~~~~L~e~v~~vkptvLIG~S---~--~~g~Fteevi~~Ma~~ 342 (497)
..+ +. . .+-.|++..+ ....|.+.++. .|++|.++ + .+++++++.++.|.
T Consensus 211 ~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk-- 285 (384)
T 1l7d_A 211 VES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK-- 285 (384)
T ss_dssp HHH-TTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC--
T ss_pred HHH-cCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC--
Confidence 000 00 0 0001111100 00127777775 99999988 3 23578999999995
Q ss_pred CCCceEEecCCC
Q 010939 343 NEKPIIFSLSNP 354 (497)
Q Consensus 343 ~~rPIIFaLSNP 354 (497)
+..+|+-+|-+
T Consensus 286 -~g~vivdva~~ 296 (384)
T 1l7d_A 286 -PGSVIIDLAVE 296 (384)
T ss_dssp -TTCEEEETTGG
T ss_pred -CCCEEEEEecC
Confidence 67888888864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.31 E-value=0.00022 Score=74.70 Aligned_cols=231 Identities=16% Similarity=0.161 Sum_probs=125.5
Q ss_pred chhHHHHHhhCCCCCceEEEEecCceeeccCCCCCcccccchhhHHHHhhhcC-CCCCcee---eEEeccCCCc----cc
Q 010939 73 KGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGG-IRPSACL---PVTIDVGTNN----EK 144 (497)
Q Consensus 73 ~g~i~~~l~n~~~~~v~viVVTDG~rILGLGDlG~~gm~I~~GKl~Ly~a~gG-i~P~~~l---Pi~LDvgtnn----~~ 144 (497)
+..+.++.++ +.+|.|=+..+.=-|+-|- -|.+.|. |+++.++ +|+|-|..-. +.
T Consensus 45 P~~v~~L~~~----G~~V~VE~gaG~~~~f~D~-------------~Y~~aGa~i~~~~~~~~adiIlkVk~p~~~e~~~ 107 (405)
T 4dio_A 45 VESVKKLKSL----GFDVVVEAGAGLGSRIPDQ-------------EYEKAGARVGTAADAKTADVILKVRRPSAQEISG 107 (405)
T ss_dssp HHHHHHHHHT----TCEEEEETTTTGGGTCCHH-------------HHHHTTCEEECGGGGGGCSEEEEEECCCTTTGGG
T ss_pred HHHHHHHHhC----CCEEEEeCCCCccCCCCHH-------------HHHHcCCEEchHHhhccCCEEEEeCCCChhHHhh
Confidence 3456655553 5577776654322333332 2444332 3333222 4777665321 34
Q ss_pred cccCcccccccccCcchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCc---HHHHHHHHcCCCCceecCccchhHHHH
Q 010939 145 LLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHN---AFDLLEKYGTTHLVFNDDIQGTASVVL 221 (497)
Q Consensus 145 Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~---af~iL~ryr~~~~~FnDDiQGTa~V~l 221 (497)
|..+-.++|+-|+--. . +.++++.++ .-++|-+|-+...+ .+.+|... ..+-|-.+|
T Consensus 108 l~~g~~l~~~lh~~~~----~----~l~~~l~~~--~it~ia~E~i~r~~ra~~l~~ls~~--------s~iAGy~Av-- 167 (405)
T 4dio_A 108 YRSGAVVIAIMDPYGN----E----EAISAMAGA--GLTTFAMELMPRITRAQSMDVLSSQ--------ANLAGYQAV-- 167 (405)
T ss_dssp SCTTCEEEEECCCTTC----H----HHHHHHHHT--TCEEEEGGGSCCSGGGGGGCHHHHH--------HHHHHHHHH--
T ss_pred cCCCcEEEEEeccccC----H----HHHHHHHHC--CCeEEEeeccccccccCccceecch--------hHHHHHHHH--
Confidence 6667777887777531 1 233333321 33456667665332 22233221 112222222
Q ss_pred HHHHHHHHHhCC----------CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccC
Q 010939 222 AGLISAMKFLGG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES 291 (497)
Q Consensus 222 Agll~Al~~~g~----------~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~ 291 (497)
+++| ...++ .+...||+|+|+|.+|.++|+++... | -+++++|++.-..+...+
T Consensus 168 --~~aa-~~l~~~~~~l~t~~g~v~~~kV~ViG~G~iG~~aa~~a~~l-----G-------a~V~v~D~~~~~l~~~~~- 231 (405)
T 4dio_A 168 --IDAA-YEYDRALPMMMTAAGTVPAAKIFVMGAGVAGLQAIATARRL-----G-------AVVSATDVRPAAKEQVAS- 231 (405)
T ss_dssp --HHHH-HHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSTTHHHHHHH-
T ss_pred --HHHH-HHhHhhhchhhccCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEcCCHHHHHHHHH-
Confidence 2333 33332 36788999999999999999988653 6 268999998542111100
Q ss_pred Cc--------------hhchhhhcccCC------CCCHHHHHhccCCcEEEEccC-----CCCCCCHHHHHHHHccCCCc
Q 010939 292 LQ--------------HFKKPWAHEHEP------VKELVDAVNAIKPTILIGTSG-----QGRTFTKEVVEAMASLNEKP 346 (497)
Q Consensus 292 l~--------------~~k~~~a~~~~~------~~~L~e~v~~vkptvLIG~S~-----~~g~Fteevi~~Ma~~~~rP 346 (497)
+. +.+..|++..++ ..+|.|+++. .|++|++.. .+.+||+++++.|. +..
T Consensus 232 ~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~Gs 306 (405)
T 4dio_A 232 LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGS 306 (405)
T ss_dssp TTCEECCCCC-----------------CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTC
T ss_pred cCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCC
Confidence 10 001124432111 2479999987 999999843 34589999999996 899
Q ss_pred eEEecCC-CCCCCCCC
Q 010939 347 IIFSLSN-PTSQSECT 361 (497)
Q Consensus 347 IIFaLSN-Pt~~~E~~ 361 (497)
+|+-+|- |-...|.+
T Consensus 307 VIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 307 VVVDLAVERGGNIEGA 322 (405)
T ss_dssp EEEETTGGGTCSBTTC
T ss_pred EEEEEeCCCCCCcccc
Confidence 9999985 33334554
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.08 E-value=0.00059 Score=70.98 Aligned_cols=104 Identities=21% Similarity=0.171 Sum_probs=67.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc------CCc---hhchhhhccc--
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE------SLQ---HFKKPWAHEH-- 303 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~------~l~---~~k~~~a~~~-- 303 (497)
+...|++|+|+|.+|..+|+.+... |. +++++|++.--.+...+ .++ .....|++..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5788999999999999999988654 62 69999987431110000 000 0011122110
Q ss_pred ----CCCCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 304 ----EPVKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 304 ----~~~~~L~e~v~~vkptvLIG~S~~-----~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
....+|.++++. .|++|++... +.++|+++++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 112468899987 9999997422 3579999999996 788999998654
No 16
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.80 E-value=0.0097 Score=58.53 Aligned_cols=122 Identities=15% Similarity=0.194 Sum_probs=81.4
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 010939 215 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 294 (497)
Q Consensus 215 GTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~ 294 (497)
.+-+|+=.++..++...+.+|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.. .+ ...
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHH
Confidence 44456655666666777889999999999999999999998864 263 688888752 11 100
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecC-CCCCCCCCCHHHH
Q 010939 295 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPTSQSECTAEEA 365 (497)
Q Consensus 295 ~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLS-NPt~~~E~~peda 365 (497)
.+ .+--......+|.|.++. .|++|-.. +.+.++++.++.|. +..+++=+| +|. ++..+.+
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 00 010000012468888876 99999665 45799999999885 667888888 453 3445444
No 17
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.78 E-value=0.01 Score=62.51 Aligned_cols=186 Identities=15% Similarity=0.139 Sum_probs=128.5
Q ss_pred cchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcH--HHHHHHHcC---C--CCce----------ecCccchhHHHH
Q 010939 159 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYGT---T--HLVF----------NDDIQGTASVVL 221 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~a--f~iL~ryr~---~--~~~F----------nDDiQGTa~V~l 221 (497)
.+..|-..|...|++++.+.-||+.-|-=+|++..-. --+.++|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 4556777889999999999999999999999987532 125566632 1 1121 233345776667
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCcccCCCccCCchhch-hh
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHFKK-PW 299 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~-~vD~~GLi~~~r~~~l~~~k~-~~ 299 (497)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++.. .++..+. .+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~G-------akVVavsD~~G~i~dp~--Gld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LG-------MRVVAVATSMGGMYAPE--GLDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEEETTEEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEcCCCeEECCC--CCCHHHHHHH
Confidence 7788888999999999999999999999999998865 36 3555 999999999864 3443321 12
Q ss_pred hcccCCCC----CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CCCCCCCCHHHHhc
Q 010939 300 AHEHEPVK----ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAYT 367 (497)
Q Consensus 300 a~~~~~~~----~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt~~~E~~peda~~ 367 (497)
......+. +-.+ +-.++.|||+=++. .+.+|++-.+.+ +-.||.--+| |++ +| +++.++
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111110 0012 34578999998876 469999888877 6779999999 653 43 344444
No 18
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.75 E-value=0.015 Score=61.26 Aligned_cols=178 Identities=19% Similarity=0.177 Sum_probs=128.3
Q ss_pred cchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHH-H-HHHHHcC---C--CCce----------ecCccchhHHHH
Q 010939 159 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF-D-LLEKYGT---T--HLVF----------NDDIQGTASVVL 221 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af-~-iL~ryr~---~--~~~F----------nDDiQGTa~V~l 221 (497)
.+..|-..|...|++++.+.-||+.-|-=+|++..-.. . +.+.|+. . -.++ .|--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 45667778899999999999899888888999874322 1 5567742 1 1122 344456888888
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhc-hhhh
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK-KPWA 300 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k-~~~a 300 (497)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+.+.|++|-|++.. .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999999764 63 4467999999999764 344322 1121
Q ss_pred cccC-------CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 301 HEHE-------PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 301 ~~~~-------~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
.... ..-+-.+. -.++.|+||=+..+ +.+|++-++.+ +-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEEL-LEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCccc-eeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 11122333 35689999988876 79999988876 6789998888 65
No 19
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.75 E-value=0.097 Score=55.54 Aligned_cols=182 Identities=15% Similarity=0.087 Sum_probs=127.3
Q ss_pred cchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHH--HHHHHH---cCCC-Cce----------ecCccchhHHHHH
Q 010939 159 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKY---GTTH-LVF----------NDDIQGTASVVLA 222 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af--~iL~ry---r~~~-~~F----------nDDiQGTa~V~lA 222 (497)
.+..|-..|...|+..+.+..||+.=|--.|++..-.- -+.+.| +... .|| .+.-.-||-=+.-
T Consensus 141 ~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~ 220 (450)
T 4fcc_A 141 KSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVY 220 (450)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHHH
Confidence 56778888999999999999999999999999764331 133444 3322 232 2333457777778
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc
Q 010939 223 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE 302 (497)
Q Consensus 223 gll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~ 302 (497)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+-|++|-|++.. .++..+.....+
T Consensus 221 ~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~e 287 (450)
T 4fcc_A 221 FTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLIE 287 (450)
T ss_dssp HHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHHH
Confidence 8889999999999999999999999999999999763 63 4566789999998764 455443222111
Q ss_pred --cCCCCCHHHH-------------HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 303 --HEPVKELVDA-------------VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 303 --~~~~~~L~e~-------------v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
......+.+. +-.++.|||+=+..+ +.+|++-++.+.+ +...+|.-=+| |+
T Consensus 288 ~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a-~g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 288 IKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIA-NGVKAVAEGANMPT 354 (450)
T ss_dssp HHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHh-cCceEEecCCCCCC
Confidence 0011112221 224689999988876 6999999999863 23457777777 65
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.59 E-value=0.0049 Score=62.27 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=77.2
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 010939 215 GTASVVLAGLISAMKFLGGSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 293 (497)
Q Consensus 215 GTa~V~lAgll~Al~~~g~~l~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~ 293 (497)
+-.-+|-.|++-.++..+.+++..++|++|+| ..|.-+|.++... | ..+++++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 34457888899999999999999999999999 5799999888652 4 458888743
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCC
Q 010939 294 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 354 (497)
Q Consensus 294 ~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNP 354 (497)
..+|.+.++. +|++|+..+.++.+++++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468889987 99999999999999999985 44566655544
No 21
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.39 E-value=0.0086 Score=60.07 Aligned_cols=82 Identities=17% Similarity=0.261 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhc
Q 010939 218 SVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK 296 (497)
Q Consensus 218 ~V~lAgll~Al~~~g~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k 296 (497)
-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... |. .+++++|+
T Consensus 142 PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~--------------- 194 (285)
T 3l07_A 142 SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF--------------- 194 (285)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT---------------
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC---------------
Confidence 467788999999999999999999999876 899999998752 52 47777653
Q ss_pred hhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 010939 297 KPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 337 (497)
Q Consensus 297 ~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~ 337 (497)
..+|.+.++. +|++|...+.++.++.++++
T Consensus 195 ---------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 ---------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp ---------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred ---------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1358888987 99999999999999998884
No 22
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.28 E-value=0.058 Score=57.55 Aligned_cols=178 Identities=15% Similarity=0.174 Sum_probs=122.3
Q ss_pred chhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHH--HHHHHHcC---C-CCce----------ecCccchhHHHHHH
Q 010939 160 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYGT---T-HLVF----------NDDIQGTASVVLAG 223 (497)
Q Consensus 160 ~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af--~iL~ryr~---~-~~~F----------nDDiQGTa~V~lAg 223 (497)
+..|-..|-..||..+.+..||..=|-=+|++..-.. -+.++|+. . -.|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 4566677888899999988899988999999875321 24566652 1 0111 12334466666667
Q ss_pred HHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCcccCCCccCCchhc------
Q 010939 224 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHFK------ 296 (497)
Q Consensus 224 ll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~-~vD~~GLi~~~r~~~l~~~k------ 296 (497)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .++..+
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 788888899999999999999999999999998763 63 455 899999888764 353331
Q ss_pred ---------hhhhcccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 297 ---------KPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 297 ---------~~~a~~~~~---~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
..|+...+. ... .+.. .++.||||=+.. ++.+|++-++.+-+ +.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~-~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPN-EKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSS-CCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecC-cCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 122210000 110 1222 468999998886 46999999999854 46779999999 65
No 23
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.18 E-value=0.013 Score=58.76 Aligned_cols=83 Identities=16% Similarity=0.241 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh
Q 010939 217 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 295 (497)
Q Consensus 217 a~V~lAgll~Al~~~g~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~ 295 (497)
.-+|-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... | -.+++++++
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----g-------AtVtv~h~~-------------- 193 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----G-------ATVSVCHIK-------------- 193 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC--------------
Confidence 4578888999999999999999999999876 899999998753 5 357887753
Q ss_pred chhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 010939 296 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 337 (497)
Q Consensus 296 k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~ 337 (497)
..+|.+.++. +|++|...+.++.++.++++
T Consensus 194 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 223 (285)
T 3p2o_A 194 ----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK 223 (285)
T ss_dssp ----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC
T ss_pred ----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC
Confidence 1358888987 99999999999999999884
No 24
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.15 E-value=0.097 Score=55.39 Aligned_cols=176 Identities=15% Similarity=0.185 Sum_probs=122.9
Q ss_pred cchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHH---HHHHHcC---C--CCce----------ecCccchhHHH
Q 010939 159 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYGT---T--HLVF----------NDDIQGTASVV 220 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~---iL~ryr~---~--~~~F----------nDDiQGTa~V~ 220 (497)
.+..|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|+. . -.++ ++.-.-||-=+
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv 218 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGV 218 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHH
Confidence 45567778899999999999999999999999985 322 5566632 1 1222 23334576666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCcccCCCccCCchhch-h
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHFKK-P 298 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~-~vD~~GLi~~~r~~~l~~~k~-~ 298 (497)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. | -+++ +.|++|-|++.. .++.... .
T Consensus 219 ~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----G-------akvVavsD~~G~i~dp~--Gld~~~l~~ 284 (440)
T 3aog_A 219 FITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----G-------ARVVAVQDHTGTVYNEA--GIDPYDLLR 284 (440)
T ss_dssp HHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEECSSCEEECTT--CCCHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----C-------CEEEEEEcCCcEEECCC--CCCHHHHHH
Confidence 667788888999999999999999999999999988763 6 3455 999999999865 3433221 1
Q ss_pred hhcccCCC--------CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 299 WAHEHEPV--------KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 299 ~a~~~~~~--------~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
+......+ -+-.| +-.++.|+||=++.+ +.+|++-.+.+ +..+|.--+| |+
T Consensus 285 ~~~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~~-n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 285 HVQEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAALE-KQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HHHHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSSS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHHhcCCcccCCCceEcCchh-hhcCCCcEEEecCCc-CccchhhHHHc----CCcEEEecCcccc
Confidence 11111111 12234 345789999987764 68888887776 6778888888 65
No 25
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.14 E-value=0.01 Score=59.55 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=75.4
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 010939 215 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 293 (497)
Q Consensus 215 GTa~V~lAgll~Al~~~g~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~ 293 (497)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++... | ..+++++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 444578888999999999999999999999995 699999888642 4 468888643
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCC
Q 010939 294 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 354 (497)
Q Consensus 294 ~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNP 354 (497)
..+|.+.++. +|++|+..+.++.+++++|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 0468889988 99999999999999999873 33455545433
No 26
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.12 E-value=0.014 Score=57.86 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhh
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a 300 (497)
-.|++.+++-.+.++++.+++|+|||.+|.+++..|.. .|. ++++++||. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46788999888889999999999999888777777654 374 689998875 222 111112221
Q ss_pred cc-------cCCCCCHHHHHhccCCcEEEEccCCC
Q 010939 301 HE-------HEPVKELVDAVNAIKPTILIGTSGQG 328 (497)
Q Consensus 301 ~~-------~~~~~~L~e~v~~vkptvLIG~S~~~ 328 (497)
.. ..+..+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888887 99999877654
No 27
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.06 E-value=0.014 Score=58.32 Aligned_cols=81 Identities=15% Similarity=0.283 Sum_probs=67.3
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 010939 216 TASVVLAGLISAMKFLGGSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 294 (497)
Q Consensus 216 Ta~V~lAgll~Al~~~g~~l~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~ 294 (497)
-.-+|-.|++..++..+ |+..++|++|+| ..|..+|.+|... | -.+++++++
T Consensus 131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----g-------AtVtv~~~~------------- 183 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----N-------YTVSVCHSK------------- 183 (276)
T ss_dssp SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------------
T ss_pred CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-------------
Confidence 34578889999999998 999999999998 4899999998752 5 357888753
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHH
Q 010939 295 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVV 336 (497)
Q Consensus 295 ~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi 336 (497)
..+|.+.++. +|++|...+.++.++++++
T Consensus 184 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~v 212 (276)
T 3ngx_A 184 -----------TKDIGSMTRS--SKIVVVAVGRPGFLNREMV 212 (276)
T ss_dssp -----------CSCHHHHHHH--SSEEEECSSCTTCBCGGGC
T ss_pred -----------cccHHHhhcc--CCEEEECCCCCccccHhhc
Confidence 1568899998 9999999999989998887
No 28
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.06 E-value=0.25 Score=52.49 Aligned_cols=190 Identities=17% Similarity=0.169 Sum_probs=129.8
Q ss_pred cchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHH--HHHHHHc---CCCC-ce----------ecCccchhHHHHH
Q 010939 159 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYG---TTHL-VF----------NDDIQGTASVVLA 222 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af--~iL~ryr---~~~~-~F----------nDDiQGTa~V~lA 222 (497)
.+..|...|-..|+..+.+-.||..=|-=+|++..-.. -+.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 35667788888899999888899998999999875322 1455665 2221 11 1222356766777
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchh----
Q 010939 223 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP---- 298 (497)
Q Consensus 223 gll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~---- 298 (497)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .++..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7788888889999999999999999999999998764 63 3345899999998764 45433321
Q ss_pred -----------hhcccCCCC--CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CCCCCCCCHHH
Q 010939 299 -----------WAHEHEPVK--ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEE 364 (497)
Q Consensus 299 -----------~a~~~~~~~--~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt~~~E~~ped 364 (497)
|+...+... +-.+ +=.++.||||=+.. ++.+|++-++.+-+ ++-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 111001100 0011 23468999998887 47999999999853 25789999999 653 55 456
Q ss_pred Hhc
Q 010939 365 AYT 367 (497)
Q Consensus 365 a~~ 367 (497)
++.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 29
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.02 E-value=0.017 Score=58.06 Aligned_cols=82 Identities=16% Similarity=0.261 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhc
Q 010939 218 SVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK 296 (497)
Q Consensus 218 ~V~lAgll~Al~~~g~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k 296 (497)
-+|-.|++..|+-.+.+|+..++|++|+|. .|..+|.+|... | -.+++++++ .
T Consensus 142 PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----g-------AtVtv~hs~-------T------- 195 (286)
T 4a5o_A 142 PCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----G-------CTVTVTHRF-------T------- 195 (286)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----T-------CEEEEECTT-------C-------
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----C-------CeEEEEeCC-------C-------
Confidence 467788999999999999999999999875 899999998752 5 357777642 0
Q ss_pred hhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 010939 297 KPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 337 (497)
Q Consensus 297 ~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~ 337 (497)
.+|.+.++. +|++|...+.++.++.++++
T Consensus 196 ----------~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (286)
T 4a5o_A 196 ----------RDLADHVSR--ADLVVVAAGKPGLVKGEWIK 224 (286)
T ss_dssp ----------SCHHHHHHT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------cCHHHHhcc--CCEEEECCCCCCCCCHHHcC
Confidence 358888987 99999999999999999884
No 30
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.00 E-value=0.07 Score=56.11 Aligned_cols=179 Identities=15% Similarity=0.170 Sum_probs=112.0
Q ss_pred cchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcH--HHHHHHHcC---CC---Cce----------ecCccchhHHH
Q 010939 159 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYGT---TH---LVF----------NDDIQGTASVV 220 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~a--f~iL~ryr~---~~---~~F----------nDDiQGTa~V~ 220 (497)
.+..|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+. .. .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 3456777889999999999999999999999998532 135666642 11 222 22234566666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC-----CcccCCCccCCchh
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK-----GLIVSSRLESLQHF 295 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~-----GLi~~~r~~~l~~~ 295 (497)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++.. .++..
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~--Gld~~ 262 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNEN--GIDFK 262 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSS--CCCHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCC--CCCHH
Confidence 66778888889999999999999999999999998875 363 334489999 9999864 34432
Q ss_pred ch-hhhcccCCCCCH-------HHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 296 KK-PWAHEHEPVKEL-------VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 296 k~-~~a~~~~~~~~L-------~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
.. .+......+.++ .+.+-.++.||||=+.. ++.+|++-.+.+ ...+|.-=+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 21 111111111100 01123356777776654 356777766665 4566666666 44
No 31
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.98 E-value=0.01 Score=60.35 Aligned_cols=111 Identities=19% Similarity=0.290 Sum_probs=75.9
Q ss_pred HHHHHHHHHHH---------hCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCc
Q 010939 220 VLAGLISAMKF---------LGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL 289 (497)
Q Consensus 220 ~lAgll~Al~~---------~g~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~ 289 (497)
|-.|.+-.++- .|.+|...++|++|+|. .|.-+|.+|... | .+++++|++..-...|.
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~ra 218 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTRG 218 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEESC
T ss_pred cHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhHH
Confidence 33444666665 68899999999999995 598888888642 4 46999999866555554
Q ss_pred cCCchhchhhhcccCC---C--CCHHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHccCCCceEEecCCC
Q 010939 290 ESLQHFKKPWAHEHEP---V--KELVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLNEKPIIFSLSNP 354 (497)
Q Consensus 290 ~~l~~~k~~~a~~~~~---~--~~L~e~v~~vkptvLIG~S~~~g~-Fteevi~~Ma~~~~rPIIFaLSNP 354 (497)
+.+... ++.... . .+|.+.++. +|++|+..+.++. ++.++++ +.=+|+-++-|
T Consensus 219 ~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~ 277 (320)
T 1edz_A 219 ESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACT 277 (320)
T ss_dssp CCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSS
T ss_pred HHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCC
Confidence 333311 111100 1 579999998 9999999998886 8988873 23355555554
No 32
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.83 E-value=0.019 Score=57.90 Aligned_cols=86 Identities=24% Similarity=0.305 Sum_probs=69.9
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCC
Q 010939 214 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL 292 (497)
Q Consensus 214 QGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l 292 (497)
.|-.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|... | -.+++++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----N-------ATVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----C-------CeEEEEeCC-------C---
Confidence 3434578888999999999999999999999876 899999998753 5 358888763 1
Q ss_pred chhchhhhcccCCCCCHH--HHHhccCCcEEEEccCCCCCCCHHHHH
Q 010939 293 QHFKKPWAHEHEPVKELV--DAVNAIKPTILIGTSGQGRTFTKEVVE 337 (497)
Q Consensus 293 ~~~k~~~a~~~~~~~~L~--e~v~~vkptvLIG~S~~~g~Fteevi~ 337 (497)
.+|. +.++. +|++|...+.++.++.++++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk 230 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK 230 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC
Confidence 1344 88888 99999999999999999873
No 33
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.79 E-value=0.048 Score=53.31 Aligned_cols=121 Identities=16% Similarity=0.241 Sum_probs=75.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
..||.|+|+|.-|.++|..+... |.. ..+++++|++ .. .+...++.| .-....++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~~---~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----LD---KLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----SH---HHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----HH---HHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988763 653 2478888874 11 122211111 00112578899986
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc--CCCceEEecCCCCCCCCCCHHHHhccccC--cEEEecCCCCCcccc
Q 010939 317 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNPTSQSECTAEEAYTWSQG--RAIFASGSPFDPFEY 386 (497)
Q Consensus 317 kptvLIG~S~~~g~Fteevi~~Ma~~--~~rPIIFaLSNPt~~~E~~peda~~~t~G--rai~AsGsPf~pv~~ 386 (497)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .+..-+|... +++-+ -|+.|..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHh
Confidence 88877 44444 3568888888765 56668888888764 3444444432 33322 36656554
No 34
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.37 E-value=0.098 Score=55.04 Aligned_cols=176 Identities=18% Similarity=0.166 Sum_probs=117.4
Q ss_pred cchhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHH---HHHHHcC---C--CCceecC----------ccchhHHH
Q 010939 159 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYGT---T--HLVFNDD----------IQGTASVV 220 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~---iL~ryr~---~--~~~FnDD----------iQGTa~V~ 220 (497)
.+.+|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|+. . ..++.-+ -.-||-=+
T Consensus 115 ~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv 193 (421)
T 1v9l_A 115 LSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGV 193 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHH
Confidence 34566778899999999999999999999999984 332 3455632 1 1222221 12355555
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEccCCcccCCCccCCchhc-hh
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHFK-KP 298 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~-~vD~~GLi~~~r~~~l~~~k-~~ 298 (497)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++.. .++... +.
T Consensus 194 ~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~G-------akVVavsD~~G~i~dp~--GlD~~~l~~ 259 (421)
T 1v9l_A 194 AVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MG-------AKVIAVSDINGVAYRKE--GLNVELIQK 259 (421)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEECSSCEEECTT--CCCTHHHHH
T ss_pred HHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEECCCcEEECCC--CCCHHHHHH
Confidence 55677788889999999999999999999999988865 36 3455 999999999764 232221 11
Q ss_pred hhcc--c------------CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 299 WAHE--H------------EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 299 ~a~~--~------------~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
+... . ..+.+-.| +-.++.|+|+=+.. ++.+|++-.+.+ +-.||.--+| |+
T Consensus 260 ~k~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 260 NKGLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp TTTSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred HHHhhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 1110 0 11101122 33468899997765 568888777766 5688888888 65
No 35
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.33 E-value=0.13 Score=52.97 Aligned_cols=102 Identities=20% Similarity=0.339 Sum_probs=63.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 313 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v 313 (497)
++.+.+++|+|+|..|..++..+... |. ++++++|+. ..+ .....+.+--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999998888653 74 679988874 111 1111111111111224688888
Q ss_pred hccCCcEEEEccCCC-CCCCHHHHHH--HH-ccCCCceEEecCCCC
Q 010939 314 NAIKPTILIGTSGQG-RTFTKEVVEA--MA-SLNEKPIIFSLSNPT 355 (497)
Q Consensus 314 ~~vkptvLIG~S~~~-g~Fteevi~~--Ma-~~~~rPIIFaLSNPt 355 (497)
+. .|++|=+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 75 99999876544 3568888887 43 222334555566553
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.26 E-value=0.086 Score=56.31 Aligned_cols=124 Identities=16% Similarity=0.243 Sum_probs=88.8
Q ss_pred cCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc
Q 010939 211 DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE 290 (497)
Q Consensus 211 DDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~ 290 (497)
+.+.|+......|+ .+.++..+.+.+++|+|.|..|.++|+.+... |+ +++.+|++.. +.
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~- 293 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA- 293 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH-
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH-
Confidence 44555555556663 25678899999999999999999999998653 63 6888887521 00
Q ss_pred CCchhchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhc
Q 010939 291 SLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 367 (497)
Q Consensus 291 ~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~ 367 (497)
+ ..+...-...+|.|+++. .|++|......++++++.++.|. +.-||.=.|.-. .|++-++..+
T Consensus 294 -~-----~a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 -I-----QAVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp -H-----HHHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred -H-----HHHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 0 011111112579999987 99999997777899999999985 667888777755 6777777666
No 37
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.24 E-value=0.041 Score=55.12 Aligned_cols=98 Identities=13% Similarity=0.269 Sum_probs=74.7
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 010939 215 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 293 (497)
Q Consensus 215 GTa~V~lAgll~Al~~~g~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~ 293 (497)
+-.-+|-.|++-.++..+.+|+..++|++|+|. .|.-+|.+|.. .|. ...+++++|+
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 334567778899999999999999999999996 58888887753 210 1467777532
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCC
Q 010939 294 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 354 (497)
Q Consensus 294 ~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNP 354 (497)
..+|.+.++. +|++|+..+.++.+++++++ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 0468889987 99999999999999999984 34566666655
No 38
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.23 E-value=0.011 Score=51.61 Aligned_cols=87 Identities=14% Similarity=0.224 Sum_probs=50.5
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 010939 215 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 294 (497)
Q Consensus 215 GTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~ 294 (497)
|..+|+.+++-.+-+.. +.|++|+|+|..|..++..|.. .|. + ++++|++ ..+ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33445555544333332 7799999999999888776643 252 4 8888874 111 111
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEEccCC
Q 010939 295 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQ 327 (497)
Q Consensus 295 ~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~ 327 (497)
..+.+.-+.....++.++++. +|++|=+.+.
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~ 90 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSS 90 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCC
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCC
Confidence 111121111124678888876 8988866554
No 39
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.21 E-value=0.54 Score=49.35 Aligned_cols=178 Identities=19% Similarity=0.168 Sum_probs=119.8
Q ss_pred chhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCc--HHHHHHHHcC---C--CCcee----------cCccchhHHHHH
Q 010939 160 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHN--AFDLLEKYGT---T--HLVFN----------DDIQGTASVVLA 222 (497)
Q Consensus 160 ~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~--af~iL~ryr~---~--~~~Fn----------DDiQGTa~V~lA 222 (497)
+.+|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+. . ..++. +.-.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 45567788899999999988999889899998752 1124455632 1 12232 222346655666
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhch-hhhc
Q 010939 223 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAH 301 (497)
Q Consensus 223 gll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-~~a~ 301 (497)
++-.+++..|.+|++.||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-+++.. .++.... .+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~--Gld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPE--GFDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCC--CCCHHHHHHHHH
Confidence 777888889999999999999999999999988865 1253 3344899999998864 3443221 1221
Q ss_pred ccCCC--------CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 302 EHEPV--------KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 302 ~~~~~--------~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
....+ -+-.| +-.++.|+||=+..+ +..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~~-n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAALE-GAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSST-TSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCCc-CccCcccHHHc----CCeEEEeCCCccc
Confidence 11111 12233 445789999977764 68888887776 5678888888 55
No 40
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.21 E-value=0.02 Score=56.68 Aligned_cols=86 Identities=21% Similarity=0.268 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhh
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a 300 (497)
-.|++.+++-.+.++++.+++|+|||.+|.+++..|.. .|. +++++++|. ..+.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 34677888888999999999999999888888877764 374 678988886 222222221 111
Q ss_pred cccCCCCCHHHHHhccCCcEEEEccCCC
Q 010939 301 HEHEPVKELVDAVNAIKPTILIGTSGQG 328 (497)
Q Consensus 301 ~~~~~~~~L~e~v~~vkptvLIG~S~~~ 328 (497)
.....++.++++. +|++|-++..+
T Consensus 163 --~~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 --KINLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp --EECHHHHHHTGGG--CSEEEECCC--
T ss_pred --cccHhhHHHHhcC--CCEEEECccCC
Confidence 0112346666666 99999766543
No 41
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.13 E-value=0.36 Score=49.57 Aligned_cols=164 Identities=18% Similarity=0.203 Sum_probs=106.8
Q ss_pred hhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHH--HHHHHHcC---CCCce---ecCccchhHHHHHHHHHHHHHhC
Q 010939 161 GQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYGT---THLVF---NDDIQGTASVVLAGLISAMKFLG 232 (497)
Q Consensus 161 g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af--~iL~ryr~---~~~~F---nDDiQGTa~V~lAgll~Al~~~g 232 (497)
..+-++++..|.+++.+..|+ -|-=+|++..-.. -+.++|+. +-..+ .|--.-||-=+.-++-.+++..|
T Consensus 92 ~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 92 PSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 345567778888888887765 4677999764321 25666662 11111 12223455556667778888889
Q ss_pred C-CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccC-CCCCHH
Q 010939 233 G-SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE-PVKELV 310 (497)
Q Consensus 233 ~-~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~-~~~~L~ 310 (497)
. +|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..+++... ..-++.
T Consensus 170 ~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~ 225 (355)
T 1c1d_A 170 LGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVALE 225 (355)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCGG
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChH
Confidence 8 8999999999999999999998754 373 67788864 111 22332110 111333
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CCC
Q 010939 311 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTS 356 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt~ 356 (497)
|..+ ++.|+|+=++ ..+.++++-++.| +..+|.--+| |+.
T Consensus 226 ell~-~~~DIliP~A-~~~~I~~~~~~~l----k~~iVie~AN~p~t 266 (355)
T 1c1d_A 226 DVLS-TPCDVFAPCA-MGGVITTEVARTL----DCSVVAGAANNVIA 266 (355)
T ss_dssp GGGG-CCCSEEEECS-CSCCBCHHHHHHC----CCSEECCSCTTCBC
T ss_pred Hhhc-CccceecHhH-HHhhcCHHHHhhC----CCCEEEECCCCCCC
Confidence 4333 4689999654 4579999999998 4578888888 653
No 42
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.91 E-value=0.029 Score=55.68 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=57.0
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhh
Q 010939 222 AGLISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300 (497)
Q Consensus 222 Agll~Al~~~g-~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a 300 (497)
.|++.+++..+ .+++..+++|+|||.+|.+++..|.. .|. ++++++|+. ..+ .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999988888887754 364 579988875 111 111111111
Q ss_pred c---ccCCCCCHHHHHhccCCcEEEEccCCC
Q 010939 301 H---EHEPVKELVDAVNAIKPTILIGTSGQG 328 (497)
Q Consensus 301 ~---~~~~~~~L~e~v~~vkptvLIG~S~~~ 328 (497)
. ......++.++++. +|++|-+.+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011346666665 99999877654
No 43
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.77 E-value=0.056 Score=53.13 Aligned_cols=110 Identities=18% Similarity=0.214 Sum_probs=72.5
Q ss_pred HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCC
Q 010939 228 MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK 307 (497)
Q Consensus 228 l~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~ 307 (497)
++..+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.- .+ ....+ .+--......
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~g~~~~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARIT-EMGLVPFHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHH-HTTCEEEEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHH-HCCCeEEchh
Confidence 3456789999999999999999999998864 263 688888752 11 11000 0100000124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHH
Q 010939 308 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEA 365 (497)
Q Consensus 308 ~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda 365 (497)
+|.|.++. .|++|-.... +.++++.++.|. +..+++=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p~-~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIPS-MILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCSS-CCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCCh-hhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888876 9999976554 799999888774 567888888632 33444443
No 44
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.68 E-value=0.069 Score=52.05 Aligned_cols=125 Identities=16% Similarity=0.296 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhhCC--------CcceeeecCCCCcHHHHHH--HHcCCCCceecCccchhHHHHHHHHHHHHHhCCCCCC
Q 010939 168 LHEFMTAVKQNYGE--------RILIQFEDFANHNAFDLLE--KYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLAD 237 (497)
Q Consensus 168 vdefv~av~~~fGp--------~~lI~~EDf~~~~af~iL~--ryr~~~~~FnDDiQGTa~V~lAgll~Al~~~g~~l~d 237 (497)
+++|++.++..|.+ ..++.+=|- ++.|..+=. ....+ .=+|-|- .|++.+|+-. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 57777777754422 234445555 555554310 00001 2233332 3677777654 5788
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 317 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 317 (497)
|++|+|||.+|.+++..|.. .|. ++|+++||. ..+.+.+.. .+.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999999888765 374 689999985 222222221 1110 123568888876
Q ss_pred CcEEEEccCC
Q 010939 318 PTILIGTSGQ 327 (497)
Q Consensus 318 ptvLIG~S~~ 327 (497)
+|++|-++..
T Consensus 167 aDiVInatp~ 176 (253)
T 3u62_A 167 AKSLFNTTSV 176 (253)
T ss_dssp CSEEEECSST
T ss_pred CCEEEECCCC
Confidence 9999966543
No 45
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.57 E-value=1.1 Score=47.60 Aligned_cols=180 Identities=17% Similarity=0.188 Sum_probs=119.2
Q ss_pred chhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHH--HHHHHHcC---C--CCceec----------CccchhHHHHH
Q 010939 160 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYGT---T--HLVFND----------DIQGTASVVLA 222 (497)
Q Consensus 160 ~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af--~iL~ryr~---~--~~~FnD----------DiQGTa~V~lA 222 (497)
+..|-..|-..||+.+.+..||..-|-=+|++..-.. -+.+.|+. . .-++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 3456677778899999888999999999999876221 13344432 1 122211 22346655666
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCC-chhc----h
Q 010939 223 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL-QHFK----K 297 (497)
Q Consensus 223 gll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l-~~~k----~ 297 (497)
++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++.+ .
T Consensus 216 ~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~ 282 (449)
T 1bgv_A 216 YVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYML 282 (449)
T ss_dssp HHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHH
T ss_pred HHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHH
Confidence 7778888899999999999999999999999888764 63 3344799999988763 35 3221 0
Q ss_pred hhhccc-CCCCCH-----------HHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 298 PWAHEH-EPVKEL-----------VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 298 ~~a~~~-~~~~~L-----------~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
.+.... ..+.+. .+.. .++.|+|+=+.. ++.+|++-.+.+.+ |...+|.-=+| |+
T Consensus 283 ~~k~~~~g~v~~y~~~~~a~~i~~~e~~-~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 283 EMRASGRNKVQDYADKFGVQFFPGEKPW-GQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHHCCCCTHHHHHHHTCEEEETCCGG-GSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhccCCChhhcccccCCEEeCchhhh-cCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 111000 000000 0122 468999997775 56999999999864 34578888888 65
No 46
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.44 E-value=0.074 Score=51.77 Aligned_cols=97 Identities=21% Similarity=0.306 Sum_probs=58.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchh-------hhcc--------
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAHE-------- 302 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~-------~a~~-------- 302 (497)
.||.|+|+|.-|.+||..+... |. +++++|++- . .+...+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 5899999999999999998753 63 688888751 1 11111111 1000
Q ss_pred -------cCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHccCCCceEEecCCCCCC
Q 010939 303 -------HEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNEKPIIFSLSNPTSQ 357 (497)
Q Consensus 303 -------~~~~~~L~e~v~~vkptvLIG~S~~~g-~Fteevi~~Ma~~~~rPIIFaLSNPt~~ 357 (497)
-....++.|+++. +|++|=. .... ...+++++.+.++.+.-.|+ .||-++.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~a-v~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEA-VPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEe-ccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0123688888887 8998843 2221 14567777777665544455 3555443
No 47
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.33 E-value=0.1 Score=55.90 Aligned_cols=111 Identities=18% Similarity=0.299 Sum_probs=78.3
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc
Q 010939 214 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 293 (497)
Q Consensus 214 QGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~ 293 (497)
.|+......|+ .+.+|..|.+.+++|+|.|..|.++|+.+.. .| -+++.+|++.. + .+.
T Consensus 257 ~~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G-------~~V~v~d~~~~----~--~~~ 315 (494)
T 3d64_A 257 YGCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LG-------ATVWVTEIDPI----C--ALQ 315 (494)
T ss_dssp HHHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEECSCHH----H--HHH
T ss_pred Hhhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CC-------CEEEEEeCChH----h--HHH
Confidence 34443444552 3568889999999999999999999998853 25 36888887521 0 000
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 294 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 294 ~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
.....-...+|.|+++. .|+++......++++++.++.|. +.-||.=.|...
T Consensus 316 -----a~~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 316 -----AAMEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp -----HHTTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred -----HHHcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 00111112579999987 99999987767899999999995 567888777755
No 48
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=94.07 E-value=0.11 Score=55.12 Aligned_cols=124 Identities=21% Similarity=0.390 Sum_probs=69.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc-cCC-----CCCHHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEP-----VKELVD 311 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~-----~~~L~e 311 (497)
.||+|+||||.|.. ..|+..+....-++.. -..|+++|.+ .+|.+.....-+..+.. ..+ .+++.|
T Consensus 1 mKI~iIGaGs~~~t--~~l~~~~~~~~~l~~~--~~ei~L~Di~----~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~e 72 (477)
T 3u95_A 1 MKISIVGAGSVRFA--LQLVEDIAQTDELSRE--DTHIYLMDVH----ERRLNASYILARKYVEELNSPVKVVKTESLDE 72 (477)
T ss_dssp CEEEEETTTSHHHH--HHHHHHHHTCTTTCST--TCEEEEECSC----HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHH
T ss_pred CEEEEECCCchhhH--HHHHHHHHhhHhcCCC--CCEEEEECCC----HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence 38999999997633 2333333221122110 1479999975 23311100001111111 111 268999
Q ss_pred HHhccCCcEEEEccC-------------------------------------CCC---CCC--------HHHHHHHHccC
Q 010939 312 AVNAIKPTILIGTSG-------------------------------------QGR---TFT--------KEVVEAMASLN 343 (497)
Q Consensus 312 ~v~~vkptvLIG~S~-------------------------------------~~g---~Ft--------eevi~~Ma~~~ 343 (497)
|+++ +|++|=..+ .+| +|- .++++.|.++|
T Consensus 73 Al~g--AD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~ 150 (477)
T 3u95_A 73 AIEG--ADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMA 150 (477)
T ss_dssp HHTT--CSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHC
T ss_pred HhCC--CCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhC
Confidence 9998 999884321 111 222 58999999999
Q ss_pred CCceEEecCCCCCCCCCCHHHHhccccCcEE
Q 010939 344 EKPIIFSLSNPTSQSECTAEEAYTWSQGRAI 374 (497)
Q Consensus 344 ~rPIIFaLSNPt~~~E~~peda~~~t~Grai 374 (497)
+.-+++=.|||. .-+|- -+.++++=|+|
T Consensus 151 P~A~~in~tNP~--~i~t~-a~~~~~~~k~v 178 (477)
T 3u95_A 151 PKAYLMQTANPV--FEITQ-AVRRWTGANII 178 (477)
T ss_dssp TTCEEEECSSCH--HHHHH-HHHHHHCCCEE
T ss_pred CCeEEEEecChH--HHHHH-HHHHhCCCCeE
Confidence 999999999997 33332 23444444443
No 49
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.05 E-value=0.12 Score=52.11 Aligned_cols=105 Identities=19% Similarity=0.283 Sum_probs=67.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC---CCHHHHHh
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV---KELVDAVN 314 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~---~~L~e~v~ 314 (497)
.||.|+|||+.|.++|.+|... |+ -+++++|.+-=..+.-...+.+.. .+......+ .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVT-SVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHH-HHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhh-hccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999998763 54 149999986210110000111111 111111122 68988998
Q ss_pred ccCCcEEEEccCCC---CC----------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010939 315 AIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 315 ~vkptvLIG~S~~~---g~----------------Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
+ +|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLD 136 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchH
Confidence 7 99988665333 32 14688899999998888888899974
No 50
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.93 E-value=0.088 Score=52.33 Aligned_cols=49 Identities=16% Similarity=0.282 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|++.+|+-.|.++++.+++++|||.+|.+++..|.+ .|. ++|++++|.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 7889999988999999999999999998888887765 364 689998875
No 51
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=93.90 E-value=0.23 Score=49.64 Aligned_cols=101 Identities=21% Similarity=0.291 Sum_probs=66.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCC---CCCHHHHHh
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVN 314 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~---~~~L~e~v~ 314 (497)
||+|+|| |..|..++..|+. .|+ ...++++|.+- .++...+|.+...+ . +-.. .+++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~--~~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAH--TPGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSS--HHHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCc--cHHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877653 354 35799999875 11100012221100 0 0001 136888999
Q ss_pred ccCCcEEEEccCCC---C-----------CCCHHHHHHHHccCCCceEEecCCCC
Q 010939 315 AIKPTILIGTSGQG---R-----------TFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 315 ~vkptvLIG~S~~~---g-----------~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+ +|++|=+.+.+ | -..+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 8 99988554443 2 24567888888899998888899997
No 52
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.88 E-value=0.11 Score=52.54 Aligned_cols=96 Identities=20% Similarity=0.286 Sum_probs=62.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc----CCCCCHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELV 310 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~ 310 (497)
++..+++|+|||.+|.+++..+.. .| | +++++|++ ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999888764 36 2 68888875 111 222222222210 1113567
Q ss_pred HHHhccCCcEEEEccCCCC-----CCCHHHHHHHHccCCCceEEecCCC
Q 010939 311 DAVNAIKPTILIGTSGQGR-----TFTKEVVEAMASLNEKPIIFSLSNP 354 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g-----~Fteevi~~Ma~~~~rPIIFaLSNP 354 (497)
+.++. .|++|.+.+.++ +++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77775 999999887654 25888888875 45577777654
No 53
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.77 E-value=0.11 Score=52.48 Aligned_cols=50 Identities=30% Similarity=0.414 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
-.|++.+|+-.+.++++.+++|+|||.+|.+++..|.. .|. ++|++++|.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 45778888888999999999999999888777777754 374 689999886
No 54
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=93.75 E-value=0.1 Score=52.51 Aligned_cols=90 Identities=27% Similarity=0.365 Sum_probs=57.8
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 301 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 301 (497)
.|++.+++-.+.++++.+++++|||.+|.+++..|.. .|. ++|++++|. ..+.+........+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888899999999999999888888877765 374 689999885 2211111111111211
Q ss_pred c------cCCCCCH---HHHHhccCCcEEEEccCCC
Q 010939 302 E------HEPVKEL---VDAVNAIKPTILIGTSGQG 328 (497)
Q Consensus 302 ~------~~~~~~L---~e~v~~vkptvLIG~S~~~ 328 (497)
. ..+..++ .+.++. +|++|-++..+
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566766 89999776654
No 55
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.74 E-value=0.097 Score=51.79 Aligned_cols=128 Identities=16% Similarity=0.120 Sum_probs=78.9
Q ss_pred CcccccchhhH-----HHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcchhhhHHHHHHHHHHHHH-hhC
Q 010939 107 CHGMGIPVGKL-----SLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQ-NYG 180 (497)
Q Consensus 107 ~~gm~I~~GKl-----~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~-~fG 180 (497)
+-|-||.-.++ ..|..+ |+| ..-+.+++.. ++ +.++++.++. .|.
T Consensus 13 viG~Pi~hS~SP~~hn~~f~~~-gl~---~~Y~~~~v~~--~~-----------------------l~~~~~~~~~~~~~ 63 (281)
T 3o8q_A 13 VFGNPINHSKSPFIHTLFARQT-QQS---MIYTAQCVPV--DG-----------------------FTEAAKHFFAQGGR 63 (281)
T ss_dssp EECCSSSCCCHHHHHHHHHHHT-TCC---EEEEEECCCT--TC-----------------------HHHHHHHHHHTTCC
T ss_pred EECCCCCccCcHHHHHHHHHHc-CCC---cEEEEeecCH--HH-----------------------HHHHHHHHHhCCCC
Confidence 33455555544 445554 788 6666677653 23 5777777763 453
Q ss_pred CCcceeeecCCCCc---HHHHHHHHcC--------CCCceecC--ccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh
Q 010939 181 ERILIQFEDFANHN---AFDLLEKYGT--------THLVFNDD--IQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGE 247 (497)
Q Consensus 181 p~~lI~~EDf~~~~---af~iL~ryr~--------~~~~FnDD--iQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGs 247 (497)
+ ++ +..|+ +++++|+... +..++++| ..|.-.= -.|++.+|+-.+.++++.+++|+|||.
T Consensus 64 G---~n---VTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~~k~vlvlGaGg 136 (281)
T 3o8q_A 64 G---CN---VTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLKGATILLIGAGG 136 (281)
T ss_dssp E---EE---ECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCTTCEEEEECCSH
T ss_pred E---EE---ECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCccCCEEEEECchH
Confidence 3 33 23444 4445544321 22334444 2332211 467888888889999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 248 AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 248 Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|.+++..|.+ .|. +++++++|.
T Consensus 137 ~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 137 AARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 88888777754 364 689999885
No 56
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.73 E-value=0.088 Score=50.14 Aligned_cols=109 Identities=15% Similarity=0.223 Sum_probs=63.2
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc--cCCCccCCc-hhchhhhccc--CC
Q 010939 231 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI--VSSRLESLQ-HFKKPWAHEH--EP 305 (497)
Q Consensus 231 ~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi--~~~r~~~l~-~~k~~~a~~~--~~ 305 (497)
...++...||.|+|+|.-|.++|..|... | .+++++|++-=- .+.....+. +....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 44578889999999999999999998763 6 368888875211 000000000 0012233221 12
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHH-HccCCCceEEecCCCC
Q 010939 306 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAM-ASLNEKPIIFSLSNPT 355 (497)
Q Consensus 306 ~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~M-a~~~~rPIIFaLSNPt 355 (497)
..++.|+++. +|++| ++-.+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3689999987 89887 444332 334666666 4334677999999973
No 57
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.72 E-value=0.021 Score=56.77 Aligned_cols=122 Identities=20% Similarity=0.313 Sum_probs=68.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC--CCHHHHHhcc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 316 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~v~~v 316 (497)
||.|+|||+.|.++|..|.. .|+ ...++++|.+---.++....+.+.. ++..+ ... .+ .+++++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~-~~i~~~~-~~a~~~- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHG-TRVWHGG-HSELAD- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSC-CEEEEEC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCC-eEEEECC-HHHhCC-
Confidence 89999999999999987754 354 2479999986210000000011111 11111 001 23 356766
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecC
Q 010939 317 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASG 378 (497)
Q Consensus 317 kptvLIG~S~~~g~--------------Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsG 378 (497)
+|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||.. ...+.+.+.+.-.-++.+|
T Consensus 68 -aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~g 139 (304)
T 2v6b_A 68 -AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGSG 139 (304)
T ss_dssp -CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEECT
T ss_pred -CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH---HHHHHHHHhCChhcEEeCC
Confidence 8998855543321 12788899999888888877999973 3333444444333455554
No 58
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=93.69 E-value=0.57 Score=50.35 Aligned_cols=179 Identities=20% Similarity=0.251 Sum_probs=118.9
Q ss_pred cchhhhHHHHHHHHHHHHH--hhCCCcceeeecCCCCcHH--HHHHHHcC---CC------CceecCc---------cch
Q 010939 159 AIGQEYAELLHEFMTAVKQ--NYGERILIQFEDFANHNAF--DLLEKYGT---TH------LVFNDDI---------QGT 216 (497)
Q Consensus 159 ~~g~~y~~~vdefv~av~~--~fGp~~lI~~EDf~~~~af--~iL~ryr~---~~------~~FnDDi---------QGT 216 (497)
.+..|-..|.-.||+.+.+ -.||..-|-=+|++..-.. -+.+.|+. .. ++-..-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 4667888899999999996 7789988999999875321 26777752 11 1111211 234
Q ss_pred hHHHHHHHHH------HHHHhCC--CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCC
Q 010939 217 ASVVLAGLIS------AMKFLGG--SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 288 (497)
Q Consensus 217 a~V~lAgll~------Al~~~g~--~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r 288 (497)
|-=+.-++-+ +++..|. +|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++..
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4333333333 3456675 58999999999999999999999763 63 4456899999999764
Q ss_pred ccCCchhch-hhhcccC------CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 289 LESLQHFKK-PWAHEHE------PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 289 ~~~l~~~k~-~~a~~~~------~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
.++..+. .+..... ....+.+.+-.++.||||=+..+ +.+|++-++.+ +..||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3544321 1211111 00001112445789999988876 79999988876 6789999999 54
No 59
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.69 E-value=0.14 Score=50.77 Aligned_cols=100 Identities=15% Similarity=0.290 Sum_probs=64.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccC----CchhchhhhcccCC---CCCHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHEHEP---VKELV 310 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~----l~~~k~~~a~~~~~---~~~L~ 310 (497)
.||.|+|||+.|.++|..+... |+ .+++++|++- ++.+. +... ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 64 2599999862 21110 1110 111111111 1466
Q ss_pred HHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010939 311 DAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~--------------Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
+++++ +|++|=+-+.+.. +.+++++.+.++++.-+|+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 77776 8988855543321 24678888888888899999999963
No 60
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.64 E-value=0.073 Score=52.51 Aligned_cols=102 Identities=15% Similarity=0.241 Sum_probs=62.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch---hchhhhcccCC--CCCHHHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH---FKKPWAHEHEP--VKELVDA 312 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~---~k~~~a~~~~~--~~~L~e~ 312 (497)
.||.|+|||+-|.++|..|... |+ ..+++++|++- ++.+.+.. +...+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988654 64 25799999851 11111110 00011100011 2456 67
Q ss_pred HhccCCcEEEEccCCC-------CCC-----------CHHHHHHHHccCCCceEEecCCCCC
Q 010939 313 VNAIKPTILIGTSGQG-------RTF-----------TKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 313 v~~vkptvLIG~S~~~-------g~F-----------teevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
++. +|++|=+...+ |-. -+++++.|.++++..+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 765 89888544432 211 1588899988888888888999973
No 61
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.53 E-value=0.23 Score=49.81 Aligned_cols=123 Identities=15% Similarity=0.205 Sum_probs=71.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhch----h---hhcc-------
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----P---WAHE------- 302 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~----~---~a~~------- 302 (497)
-.||.|+|+|.-|.+||..+..+ |. +++++|++- + .+...+. . +...
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998763 74 688888751 1 1111100 0 0000
Q ss_pred --------cCCCCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcE
Q 010939 303 --------HEPVKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA 373 (497)
Q Consensus 303 --------~~~~~~L~e~v~~vkptvLIG~S~~~g-~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Gra 373 (497)
-....++.|++++ +|++| .+.+.. .+.+++++.+.++.+.-.|++ ||=++ ..+.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0113689999987 88887 333322 255678888887765555554 44332 44555554443211
Q ss_pred EEecCCCCCccc
Q 010939 374 IFASGSPFDPFE 385 (497)
Q Consensus 374 i~AsGsPf~pv~ 385 (497)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 133344777764
No 62
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.49 E-value=0.1 Score=51.41 Aligned_cols=130 Identities=18% Similarity=0.177 Sum_probs=79.4
Q ss_pred CcccccchhhH-----HHHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcchhhhHHHHHHHHHHHHH-hhC
Q 010939 107 CHGMGIPVGKL-----SLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQ-NYG 180 (497)
Q Consensus 107 ~~gm~I~~GKl-----~Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~-~fG 180 (497)
+-|-||.-.++ ..|..+ |+| ..-+.+++.. ++ +.++++.++. .|+
T Consensus 7 viG~Pi~hS~SP~~hn~~f~~~-gl~---~~Y~~~~v~~--~~-----------------------l~~~~~~~~~~~~~ 57 (272)
T 3pwz_A 7 VIGRPINHTKSPLIHGLFAQAS-NQQ---LEYGAIEGSL--DD-----------------------FEAQVLQFRSEGGK 57 (272)
T ss_dssp EEESSCTTCSHHHHHHHHHHHT-TCC---EEEEEEECCT--TT-----------------------HHHHHHHHHHTTCC
T ss_pred EECCCcCCcccHHHHHHHHHHc-CCC---cEEEEEEcCH--HH-----------------------HHHHHHHHhhCCCC
Confidence 33555555554 334444 888 6666677653 23 5777777763 454
Q ss_pred CCcceeeecCCCCcHHHHHHHHcC---------CCCceecC-ccchhHHHHHHHHHH-HHHhCCCCCCceEEEeCcChHH
Q 010939 181 ERILIQFEDFANHNAFDLLEKYGT---------THLVFNDD-IQGTASVVLAGLISA-MKFLGGSLADQRFLFLGAGEAG 249 (497)
Q Consensus 181 p~~lI~~EDf~~~~af~iL~ryr~---------~~~~FnDD-iQGTa~V~lAgll~A-l~~~g~~l~d~riv~~GAGsAg 249 (497)
+ ++.--=-...+++++|+... .+ ++.|+ ..|.-.= -.|++.+ ++-.+.++++.+++|+|||.+|
T Consensus 58 G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv-~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~~k~~lvlGaGg~~ 132 (272)
T 3pwz_A 58 G---MNITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFD-GIGLLRDIEENLGEPLRNRRVLLLGAGGAV 132 (272)
T ss_dssp E---EEECTTCHHHHHHHCSEECHHHHHHTCCSEE-EEETTEEEEECCH-HHHHHHHHHTTSCCCCTTSEEEEECCSHHH
T ss_pred E---EEECchhHHHHHHHHhhCCHHHHHhCccceE-EccCCeEEEecCC-HHHHHHHHHHHcCCCccCCEEEEECccHHH
Confidence 4 43332122234555554321 22 33333 3443322 4578888 8878889999999999999888
Q ss_pred HHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 250 TGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 250 ~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+++..|.+ .|. +++++++|.
T Consensus 133 ~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 133 RGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp HHHHHHHHH-----TCC------SEEEEECSC
T ss_pred HHHHHHHHH-----cCC------CEEEEEeCC
Confidence 888777765 364 689988875
No 63
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.46 E-value=0.17 Score=52.01 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHcCCC-Ccee---------cCccchhHHHHHHHHHHHHH-hCC
Q 010939 165 AELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTH-LVFN---------DDIQGTASVVLAGLISAMKF-LGG 233 (497)
Q Consensus 165 ~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~-~~Fn---------DDiQGTa~V~lAgll~Al~~-~g~ 233 (497)
++++..|.+.+.+..|+ .|-=+|++..-. .+...-+++ ++-- |-..-||.=+.-++..+++. .|.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 34567777777777765 466788875432 333333333 1111 11124554444555666665 476
Q ss_pred -CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHH
Q 010939 234 -SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 312 (497)
Q Consensus 234 -~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 312 (497)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ . +.+......|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 89999999999999999999998653 73 57788853 1 11222222221 011122232
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC-CC
Q 010939 313 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN-Pt 355 (497)
. ..+.|++|=++ ..++++++.++.| ...+|.--+| |+
T Consensus 227 l-~~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 Y-GVTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp T-TCCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred h-ccCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 2 25789999654 4569999888887 4567776777 54
No 64
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=93.44 E-value=0.093 Score=55.57 Aligned_cols=106 Identities=17% Similarity=0.282 Sum_probs=67.8
Q ss_pred CCCceEEEeCcChH--HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc---CCCCCH
Q 010939 235 LADQRFLFLGAGEA--GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH---EPVKEL 309 (497)
Q Consensus 235 l~d~riv~~GAGsA--g~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~---~~~~~L 309 (497)
+++.||.|+||||. |.|++..|+.. ..+ . ..++++|.+- ++.+.+......+.+.. ....++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 78999888752 122 2 3899999861 11000000000111100 112689
Q ss_pred HHHHhccCCcEEEEccCCC---------------CCC---------------------CHHHHHHHHccCCCceEEecCC
Q 010939 310 VDAVNAIKPTILIGTSGQG---------------RTF---------------------TKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 310 ~e~v~~vkptvLIG~S~~~---------------g~F---------------------teevi~~Ma~~~~rPIIFaLSN 353 (497)
.||+++ +|.+|=.-.+| |.. -.++++.|.+++..-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 89888444322 221 3477888889999999999999
Q ss_pred CC
Q 010939 354 PT 355 (497)
Q Consensus 354 Pt 355 (497)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 97
No 65
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=93.36 E-value=0.14 Score=50.53 Aligned_cols=49 Identities=33% Similarity=0.432 Sum_probs=41.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|++.+++-.|.++++.|++++|||-|+.+|+-.|.+ .|. ++|++++|.
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nRt 158 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDPS 158 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCCC
Confidence 4567888888999999999999999999999877765 364 789999874
No 66
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=93.09 E-value=0.16 Score=54.16 Aligned_cols=124 Identities=14% Similarity=0.155 Sum_probs=75.3
Q ss_pred CceEEEeCcChHH--HHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc---ccCC---CCC
Q 010939 237 DQRFLFLGAGEAG--TGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---EHEP---VKE 308 (497)
Q Consensus 237 d~riv~~GAGsAg--~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~---~~~~---~~~ 308 (497)
..||.|+|||+.| .++|..|+.. .++ +...++++|.+- ++.+........+.. .... .++
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4699999999964 5556666531 122 136899999863 211111111112211 1111 258
Q ss_pred HHHHHhccCCcEEEEccCC---------------CCCCC-------------------------HHHHHHHHccCCCceE
Q 010939 309 LVDAVNAIKPTILIGTSGQ---------------GRTFT-------------------------KEVVEAMASLNEKPII 348 (497)
Q Consensus 309 L~e~v~~vkptvLIG~S~~---------------~g~Ft-------------------------eevi~~Ma~~~~rPII 348 (497)
+.+++++ +|++|=+.+. .|.|. +++++.|.++|..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899988 9998855532 13333 5899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhccccCcEEEecC
Q 010939 349 FSLSNPTSQSECTAEEAYTWSQGRAIFASG 378 (497)
Q Consensus 349 FaLSNPt~~~E~~peda~~~t~Grai~AsG 378 (497)
+-.|||.. +..+-+.++..-| +|.+|
T Consensus 149 i~~TNPvd---i~t~~~~k~p~~r-viG~c 174 (480)
T 1obb_A 149 LQAANPIF---EGTTLVTRTVPIK-AVGFC 174 (480)
T ss_dssp EECSSCHH---HHHHHHHHHSCSE-EEEEC
T ss_pred EEeCCcHH---HHHHHHHHCCCCc-EEecC
Confidence 99999972 3444455554444 55554
No 67
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=93.08 E-value=0.12 Score=50.04 Aligned_cols=37 Identities=30% Similarity=0.409 Sum_probs=32.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|++.||+++|+|..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 46788999999999999999998764 86 799999987
No 68
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.99 E-value=0.47 Score=49.13 Aligned_cols=195 Identities=12% Similarity=0.100 Sum_probs=114.9
Q ss_pred CCCceecCc---cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 205 THLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 205 ~~~~FnDDi---QGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+.+.|.-- +.+|=-+++.+|+..|-.|..|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 455555432 2344458999999999999999999999999999999999988643 64 57888864
Q ss_pred CcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc---C-----CCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 282 GLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS---G-----QGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 282 GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S---~-----~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
.- . . . ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..++.=.|.
T Consensus 149 ~~------~-~-----~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A-R-----E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H-H-----S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h-h-----c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 11 0 0 0 01123679999987 89887542 1 34688999998885 5667776775
Q ss_pred CCCCCCCCHHHHhccccCcEEEe-----cCCCCCccccCCeeeCCCCccccccchhhhHHHHHcCCcccCHHHHHHHHHH
Q 010939 354 PTSQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEA 428 (497)
Q Consensus 354 Pt~~~E~~peda~~~t~Grai~A-----sGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~m~~aAA~a 428 (497)
-.---|-.-.+|+ .+|+..-| ..=|.+ +.. .. + +|..+-|=++-....+ ...|...+++.
T Consensus 209 G~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~~----~~~-l~--~-~nvi~TPHiag~t~e~-----~~~~~~~~~~n 273 (380)
T 2o4c_A 209 GAVVDNQALRRLL--EGGADLEVALDVWEGEPQA----DPE-LA--A-RCLIATPHIAGYSLEG-----KLRGTAQIYQA 273 (380)
T ss_dssp GGGBCHHHHHHHH--HTTCCEEEEESCCTTTTSC----CHH-HH--T-TCSEECSSCTTCCHHH-----HHHHHHHHHHH
T ss_pred CcccCHHHHHHHH--HhCCCceEEeeeeccCCCC----chh-hc--c-CCEEEccccCcCCHHH-----HHHHHHHHHHH
Confidence 3211221122233 34553333 111211 111 11 1 4788888776322222 13455556666
Q ss_pred HhccCCccC-CCCCCccCC
Q 010939 429 LAGQVTQEN-FDKGLLYPP 446 (497)
Q Consensus 429 LA~~v~~~~-~~~~~l~P~ 446 (497)
+......+. ..-..++|.
T Consensus 274 l~~~l~g~~~~~~~~~~p~ 292 (380)
T 2o4c_A 274 YCAWRGIAERVSLQDVLPE 292 (380)
T ss_dssp HHHHHTCCCCCCGGGTCCC
T ss_pred HHHHHcCCCccchhhcCCC
Confidence 666654332 222345553
No 69
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=92.96 E-value=0.44 Score=47.74 Aligned_cols=114 Identities=12% Similarity=0.171 Sum_probs=73.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 301 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 301 (497)
++.+++-.+..+ ...++.|+|+|..|-.+++.+... .++ ++|+++|+. +.+.+ ...+.+
T Consensus 108 ~s~laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a~~l---a~~l~~ 166 (313)
T 3hdj_A 108 CTVLAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------ASPEI---LERIGR 166 (313)
T ss_dssp HHHHHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CCHHH---HHHHHH
T ss_pred HHHHHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HHHHH---HHHHHH
Confidence 344555555433 457999999999998888877653 233 789999997 21112 222221
Q ss_pred c----cCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHccCCCceEEecCC--CCCCCCCCHHHHh
Q 010939 302 E----HEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAEEAY 366 (497)
Q Consensus 302 ~----~~~~~~L~e~v~~vkptvLIG~S~~~-g~Fteevi~~Ma~~~~rPIIFaLSN--Pt~~~E~~peda~ 366 (497)
. .... ++.|+++. .|++|-+.... .+|..+++ .+..+|..++. |. +.|+.++-..
T Consensus 167 ~~g~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~~ 228 (313)
T 3hdj_A 167 RCGVPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEALR 228 (313)
T ss_dssp HHTSCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHHH
T ss_pred hcCCeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHHh
Confidence 1 1123 89999998 99999665432 35665544 36778888876 44 5899987653
No 70
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.67 E-value=0.82 Score=48.89 Aligned_cols=108 Identities=16% Similarity=0.212 Sum_probs=76.3
Q ss_pred HHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc-cCCCC
Q 010939 229 KFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVK 307 (497)
Q Consensus 229 ~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~ 307 (497)
|..+..+.+.+++|+|+|..|.++|..+.. .|. +++.+|++- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 455668899999999999999999988754 262 688888641 11112221 11124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhc
Q 010939 308 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 367 (497)
Q Consensus 308 ~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~ 367 (497)
++.|+++. .|++|-+.+..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888876 99999988878899999999985 566777777765 3676665543
No 71
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.60 E-value=0.11 Score=52.32 Aligned_cols=127 Identities=15% Similarity=0.255 Sum_probs=72.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC---CCHHHHHh
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV---KELVDAVN 314 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~---~~L~e~v~ 314 (497)
.||.|+|||+.|.++|.++.. .|+ -+++++|.+-=..++....+.+....+. ....+ .++ ++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~ 81 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIG-SPAKIFGENNY-EYLQ 81 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHT-CCCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccC-CCCEEEECCCH-HHHC
Confidence 599999999999999987765 364 1499999862111100001111111111 11111 467 7787
Q ss_pred ccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccc--cCcEEEecC
Q 010939 315 AIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAIFASG 378 (497)
Q Consensus 315 ~vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t--~Grai~AsG 378 (497)
+ +|++|=+.+.+ |. .-+++.+.+.++++.-+|+--|||.+. ..+-+.+.+ .-.-++++|
T Consensus 82 ~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 82 N--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA---MVYYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp T--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGEEESC
T ss_pred C--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH---HHHHHHHhcCCChhhEEEeC
Confidence 7 89988554322 21 245778888888888787667999742 233343332 123366666
Q ss_pred CCCC
Q 010939 379 SPFD 382 (497)
Q Consensus 379 sPf~ 382 (497)
++.+
T Consensus 157 t~Ld 160 (328)
T 2hjr_A 157 GVLD 160 (328)
T ss_dssp HHHH
T ss_pred cHHH
Confidence 5443
No 72
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.49 E-value=0.099 Score=52.39 Aligned_cols=111 Identities=13% Similarity=0.123 Sum_probs=67.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC--Ccc--cCCCccCCchhchhhhcccCCCCCHHHH
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK--GLI--VSSRLESLQHFKKPWAHEHEPVKELVDA 312 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~--GLi--~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 312 (497)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ ..- .++...+|.+...++..+-....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 59999998 9999998887764 254111112479999975 100 0000001211101222111112678999
Q ss_pred HhccCCcEEEEccCCCCC--------------CCHHHHHHHHccC-CCceEEecCCCC
Q 010939 313 VNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~--------------Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
+++ .|++|=+.+.+.. .++++++.+.+++ .+.+|+-.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 988 8998855554421 3567889999996 787777789997
No 73
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.47 E-value=0.24 Score=43.39 Aligned_cols=37 Identities=22% Similarity=0.389 Sum_probs=28.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+++...+|+|+|+|..|..+|..|.. .| .+++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 45667899999999999999988864 25 378999875
No 74
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.46 E-value=0.2 Score=50.89 Aligned_cols=96 Identities=20% Similarity=0.316 Sum_probs=60.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc----cCCCCCHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE----HEPVKELV 310 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~----~~~~~~L~ 310 (497)
+...+++|+|+|..|..+|+.+.. .|. +++++|++- .+ +...+..+... .....++.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l~ 224 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANIK 224 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHHH
Confidence 778999999999999999988764 362 688888751 11 11111111110 11224677
Q ss_pred HHHhccCCcEEEEccCCCC-----CCCHHHHHHHHccCCCceEEecCCC
Q 010939 311 DAVNAIKPTILIGTSGQGR-----TFTKEVVEAMASLNEKPIIFSLSNP 354 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g-----~Fteevi~~Ma~~~~rPIIFaLSNP 354 (497)
++++. .|++|.+.+.++ +++++.++.|. +.-+|.-+|.+
T Consensus 225 ~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 225 KSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 88876 999999876543 46899999885 44566666644
No 75
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.41 E-value=1.2 Score=44.41 Aligned_cols=122 Identities=16% Similarity=0.117 Sum_probs=81.5
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhc
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQT 264 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~----------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~ 264 (497)
..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 3566665432 23344578888888774 35789999999999999999999988643
Q ss_pred CCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHH
Q 010939 265 NMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMA 340 (497)
Q Consensus 265 G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteevi~~Ma 340 (497)
|+ +++.+|+.. . .. ......-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~------~~--~~~~~g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I------RE--KAEKINAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C------HH--HHHHTTCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c------hh--HHHhcCceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 688888741 1 00 000100112478899987 898885421 33678899999885
Q ss_pred ccCCCceEEecCCC
Q 010939 341 SLNEKPIIFSLSNP 354 (497)
Q Consensus 341 ~~~~rPIIFaLSNP 354 (497)
+.-++.-.|.-
T Consensus 224 ---~ga~lIn~arg 234 (313)
T 2ekl_A 224 ---DNVIIVNTSRA 234 (313)
T ss_dssp ---TTEEEEESSCG
T ss_pred ---CCCEEEECCCC
Confidence 56788877773
No 76
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.34 E-value=0.23 Score=48.16 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
-.|++.+|+-.|.++++.+++|+|||.+|.+++..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567788888888899999999999998888888777652 5 468888875
No 77
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=92.21 E-value=0.71 Score=47.86 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=86.9
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 280 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~ 280 (497)
..|.+.|.-- +.+|=-+++.+|+..|-.|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3555555432 3455568999999999999999999999999999999999998653 65 6787876
Q ss_pred CCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----C----CCCCCCHHHHHHHHccCCCceEEecC
Q 010939 281 KGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----G----QGRTFTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 281 ~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~----~~g~Fteevi~~Ma~~~~rPIIFaLS 352 (497)
.. . . .. ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..|+.=.|
T Consensus 151 ~~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 31 0 0 00 11234689999987 89887432 1 34689999999995 677888777
Q ss_pred CCC
Q 010939 353 NPT 355 (497)
Q Consensus 353 NPt 355 (497)
.-.
T Consensus 211 RG~ 213 (381)
T 3oet_A 211 RGP 213 (381)
T ss_dssp CGG
T ss_pred CCc
Confidence 644
No 78
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.19 E-value=0.13 Score=52.60 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|++.||+++|||..|..+|..|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 47788999999999999999999875 86 799999997
No 79
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.09 E-value=0.17 Score=48.82 Aligned_cols=38 Identities=26% Similarity=0.448 Sum_probs=32.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 35677999999999999999999875 76 7899999973
No 80
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.07 E-value=0.18 Score=48.99 Aligned_cols=49 Identities=27% Similarity=0.355 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
-.|++.+|+-.|.+++..+++|+|||.+|.+++..|... | .+++++||.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888889999999999999988888887652 5 478988875
No 81
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.02 E-value=0.13 Score=51.65 Aligned_cols=100 Identities=20% Similarity=0.282 Sum_probs=64.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc----CCchhchhhhcccCCC---CCHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELV 310 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~----~l~~~k~~~a~~~~~~---~~L~ 310 (497)
.||.|+|||+.|.++|.++... |+ -+++++|.+ .++.+ .+.+.. .+......+ .++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~------~~v~L~Di~----~~~l~~~~~~l~~~~-~~~~~~~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NL------GDVVLFDIV----KNMPHGKALDTSHTN-VMAYSNCKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECSS----SSHHHHHHHHHHTHH-HHHTCCCCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeCC----HHHHHHHHHHHHhhh-hhcCCCcEEEECCCH-
Confidence 4899999999999999888753 65 139999975 22211 111111 111111111 567
Q ss_pred HHHhccCCcEEEEccCCC---CC----------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010939 311 DAVNAIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~---g~----------------Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
+++++ +|++|=+.+.+ |. +-+++.+.|.++++.-+|+=.|||..
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~ 130 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVD 130 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChH
Confidence 78887 99988554332 31 35678888888998888777799974
No 82
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=91.98 E-value=0.49 Score=48.14 Aligned_cols=38 Identities=24% Similarity=0.534 Sum_probs=33.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|++.||+++|+|..|..+|..|+.+ |+ ++|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 357788999999999999999999876 76 799999986
No 83
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=91.97 E-value=0.13 Score=51.79 Aligned_cols=106 Identities=17% Similarity=0.278 Sum_probs=64.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
..||.|+|||+.|..++-+|+.. ++ ...++++|.+-=-.++...+|.+.. +|..+..-..+-.+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877543 54 2689999984100000000122211 232211001234667877
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 317 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 317 kptvLIG~S~~~g~--------------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 9999865554422 1246777888889999999999997
No 84
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=91.88 E-value=0.92 Score=43.94 Aligned_cols=81 Identities=19% Similarity=0.179 Sum_probs=55.4
Q ss_pred eecCCCCcHHHHHHHHcC------CCCceecCccchhHHHHHHHHHHHHHh-CCCCCCceEEEeC-cChHHHHHHHHHHH
Q 010939 187 FEDFANHNAFDLLEKYGT------THLVFNDDIQGTASVVLAGLISAMKFL-GGSLADQRFLFLG-AGEAGTGIAELIAL 258 (497)
Q Consensus 187 ~EDf~~~~af~iL~ryr~------~~~~FnDDiQGTa~V~lAgll~Al~~~-g~~l~d~riv~~G-AGsAg~Gia~ll~~ 258 (497)
++-..-..+.+++++-+. +..+| .|..|.- ..-.|++.+++-. +.++++.+++|.| +|.+|.+++..|.+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 444444467777776652 22334 4444532 3456777888776 7889999999999 89999999888865
Q ss_pred HHHHhcCCChhhhcCeEEEEccC
Q 010939 259 EISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 259 ~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|. +++++|++
T Consensus 142 -----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 -----EGA-------EVVLCGRK 152 (287)
T ss_dssp -----TTC-------EEEEEESS
T ss_pred -----CcC-------EEEEEECC
Confidence 363 48888875
No 85
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=91.86 E-value=3.6 Score=43.05 Aligned_cols=192 Identities=15% Similarity=0.203 Sum_probs=118.8
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 262 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~ 262 (497)
..|++||--- +.+|=-++|.+|+..|- .+..|.+.++.|+|-|..|..+|+.+...
T Consensus 102 ~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~--- 178 (416)
T 3k5p_A 102 RGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL--- 178 (416)
T ss_dssp TTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred cCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC---
Confidence 5788888643 34556678888888763 25678999999999999999999988643
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHH
Q 010939 263 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEA 338 (497)
Q Consensus 263 ~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteevi~~ 338 (497)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.-- ..++|+++.++.
T Consensus 179 --G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~~ 233 (416)
T 3k5p_A 179 --GM-------TVRYYDTSDK--------LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLRK 233 (416)
T ss_dssp --TC-------EEEEECTTCC--------CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHHH
T ss_pred --CC-------EEEEECCcch--------hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHhh
Confidence 75 6888887511 1100 01 123689999988 999884321 236899999999
Q ss_pred HHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCC-C--CccccCCeeeCC-CCccccccchhhhHHHHHcCC
Q 010939 339 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP-F--DPFEYGDNVFVP-GQANNAYIFPGLGLGLIMSGA 414 (497)
Q Consensus 339 Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsP-f--~pv~~~G~~~~p-~Q~NN~~iFPGiglG~i~~~a 414 (497)
|. +..++.=.|.-..--|-.-.+|+ ..|+.- +.|.. | +|..-+.....| -+..|..+-|=+|-....++
T Consensus 234 mk---~gailIN~aRG~vvd~~aL~~aL--~~g~i~-gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~- 306 (416)
T 3k5p_A 234 MK---KGAFLINNARGSDVDLEALAKVL--QEGHLA-GAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQ- 306 (416)
T ss_dssp SC---TTEEEEECSCTTSBCHHHHHHHH--HTTSEE-EEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHH-
T ss_pred CC---CCcEEEECCCChhhhHHHHHHHH--HcCCcc-EEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHH-
Confidence 95 67888888875522333333444 356643 22221 2 121111000111 35678999998775433332
Q ss_pred cccCHHHHHHHHHHHhccCC
Q 010939 415 IRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 415 ~~itd~m~~aAA~aLA~~v~ 434 (497)
+.|...+++.|.+...
T Consensus 307 ----~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 307 ----ERIGTEVTRKLVEYSD 322 (416)
T ss_dssp ----HHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHh
Confidence 5566667777776653
No 86
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.86 E-value=1.5 Score=45.95 Aligned_cols=115 Identities=23% Similarity=0.276 Sum_probs=81.9
Q ss_pred chhhhHHHHHHHHHHHHHhhCCCcceeeecCCCCcHHH---HHHHHc---CCC-C---ceecC----------ccchhHH
Q 010939 160 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYG---TTH-L---VFNDD----------IQGTASV 219 (497)
Q Consensus 160 ~g~~y~~~vdefv~av~~~fGp~~lI~~EDf~~~~af~---iL~ryr---~~~-~---~FnDD----------iQGTa~V 219 (497)
+.+|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|. ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4566778889999999998899988999999984 332 345553 221 2 33222 2346666
Q ss_pred HHHHHHHHHHHhCCC-CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEE-ccCCcccC
Q 010939 220 VLAGLISAMKFLGGS-LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLV-DSKGLIVS 286 (497)
Q Consensus 220 ~lAgll~Al~~~g~~-l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~v-D~~GLi~~ 286 (497)
+.-++..+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++.+ |+.|-++.
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~~ 251 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIYN 251 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCccccC
Confidence 666778888889999 9999999999999999999988651 264 45544 88775443
No 87
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.77 E-value=0.3 Score=49.66 Aligned_cols=115 Identities=13% Similarity=0.172 Sum_probs=70.1
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 301 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 301 (497)
++.+++..... ....++.|+|+|..|..++..+... .+. ++++++|+. ..+ .......|..
T Consensus 116 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALAR--PNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhcc--ccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 45666665543 4567999999999999988776543 243 688988874 221 2222222211
Q ss_pred c----cCCCCCHHHHHhccCCcEEEEccCCC---CCCCHHHHHHHHccCCCceEEecCC--CCCCCCCCHHH
Q 010939 302 E----HEPVKELVDAVNAIKPTILIGTSGQG---RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAEE 364 (497)
Q Consensus 302 ~----~~~~~~L~e~v~~vkptvLIG~S~~~---g~Fteevi~~Ma~~~~rPIIFaLSN--Pt~~~E~~ped 364 (497)
. .....++.|+++. +|++|=+...+ .+|..++++ +.=.|+.++. |. +-|+.++-
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l~------~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDMLE------PGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGCC------TTCEEEECSCCBTT-BEEECHHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHcC------CCCEEEECCCCCCC-ceeeCHHH
Confidence 0 1123689999987 89998665543 234443332 3447777775 55 67777653
No 88
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.73 E-value=0.34 Score=48.32 Aligned_cols=120 Identities=17% Similarity=0.265 Sum_probs=73.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc-CCCCCHHHHHhcc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKELVDAVNAI 316 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~-~~~~~L~e~v~~v 316 (497)
.||.|+|||..|.++|..++.. |+ ...++|+|.+-= ..+...++.+ +..+. ....++ +++++
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998643 54 268999998631 1111111221 21111 111566 77877
Q ss_pred CCcEEEEccCCC--CC-----------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcccc--CcEEEecC
Q 010939 317 KPTILIGTSGQG--RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASG 378 (497)
Q Consensus 317 kptvLIG~S~~~--g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~--Grai~AsG 378 (497)
+|++|=+.+.+ |- .-+++++.|.++++.-+|+-.|||.. +..+-+++.+. -.-+|++|
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rviG~g 150 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVIGIG 150 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEEECT
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHeeCCC
Confidence 99998555442 10 13578889999999999888999973 44444444321 12356665
No 89
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=91.60 E-value=0.16 Score=51.00 Aligned_cols=105 Identities=14% Similarity=0.229 Sum_probs=63.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 317 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 317 (497)
.||.|+|||+.|..++-+|+.. ++ ...++++|.+-=-.++...+|.+.. +|..+..-..+-.+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 5999999999999988887543 54 2689999984100000000122211 232211001234567777
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 318 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 318 ptvLIG~S~~~g~--------------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 9999855544321 2245777888899999999999997
No 90
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.59 E-value=0.088 Score=52.57 Aligned_cols=105 Identities=16% Similarity=0.261 Sum_probs=63.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC-CCHHHHHhcc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV-KELVDAVNAI 316 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~-~~L~e~v~~v 316 (497)
.||.|+|||..|.++|..+... |+ ...++++|.+--..++...++.+. .++......+ .+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999776542 54 257999998621111100012111 1111100000 233466776
Q ss_pred CCcEEEEccCCCC--------------CCCHHHHHHHHccCCCceEEecCCCC
Q 010939 317 KPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 317 kptvLIG~S~~~g--------------~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+|++|=+.+.+. ..-+++++.|.++++.-++|-.|||-
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 899885544432 12357888888888888888889996
No 91
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=91.56 E-value=0.12 Score=51.14 Aligned_cols=103 Identities=18% Similarity=0.271 Sum_probs=64.0
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CCcccCCCccCCchhchhhhcccCCC--CCHHHH
Q 010939 238 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWAHEHEPV--KELVDA 312 (497)
Q Consensus 238 ~riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~--~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~ 312 (497)
.||+|.| ||..|..++..|+. .|+ ...+.++|. +-=-.++-..++.+... +..+ ... ++ .++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~-~~v~~~~-~~a 67 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSN-TRVRQGG-YED 67 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCC-CEEEECC-GGG
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCC-cEEEeCC-HHH
Confidence 3899999 99999998887754 254 256999997 31000000001221111 1111 001 22 566
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 313 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+++ +|++|=+.+.+ |- .++++++.|.+++.+.+|+--|||.
T Consensus 68 ~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 68 TAG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp GTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred hCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 776 99998666544 22 4667889999999999999999996
No 92
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=91.45 E-value=0.14 Score=54.02 Aligned_cols=127 Identities=14% Similarity=0.258 Sum_probs=77.1
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc--c-cCC---CCCHH
Q 010939 238 QRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH--E-HEP---VKELV 310 (497)
Q Consensus 238 ~riv~~GAGsA-g~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~--~-~~~---~~~L~ 310 (497)
.||.|+|||+. |.+++..|+.. ..++. ...++|+|.+-- +++.+.+.+....+.. . +.. .+++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 59999999997 55555555431 12442 267999998620 0211111111122211 1 111 25889
Q ss_pred HHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010939 311 DAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~----------------------------------Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
|++++ +|++|=+.+.++. .=.++++.|.++|..-+|+-.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99998 9999866665421 13588999999999999999999972
Q ss_pred CCCCCHHHHhccccCcEEEecC
Q 010939 357 QSECTAEEAYTWSQGRAIFASG 378 (497)
Q Consensus 357 ~~E~~peda~~~t~Grai~AsG 378 (497)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 3444455556332466654
No 93
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.32 E-value=0.21 Score=49.95 Aligned_cols=107 Identities=15% Similarity=0.266 Sum_probs=66.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC-CCHHHHHh
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV-KELVDAVN 314 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~-~~L~e~v~ 314 (497)
+..||.|+|||..|..+|-.|... |+ ...++++|.+-=..++...++.+. .++....... .+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999988876542 54 268999997510011100112222 2333111011 13467777
Q ss_pred ccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCceEEecCCCC
Q 010939 315 AIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~F--------------teevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+ +|++|=+.+.+..- =+++++.|.+++..-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 7 99998555544221 246777888899999999999996
No 94
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.31 E-value=0.25 Score=49.15 Aligned_cols=104 Identities=15% Similarity=0.300 Sum_probs=61.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc-CCCCCHHHHHhccC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKELVDAVNAIK 317 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~-~~~~~L~e~v~~vk 317 (497)
||.|+|||+.|.++|..|... |. ..+++++|++-=-.+.-...+.+. .++.... -...+ .++++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~~~~~~~~~~l~~~-~~~~~~~~i~~~d-~~~~~~-- 67 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDKKRAEGDALDLIHG-TPFTRRANIYAGD-YADLKG-- 67 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-GGGSCCCEEEECC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHHHHHhh-hhhcCCcEEEeCC-HHHhCC--
Confidence 799999999999999888653 54 247999998510000000001100 0111000 00123 355655
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCCC
Q 010939 318 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 318 ptvLIG~S~~~g~--------------Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
+|++|=+-..+.. .-+++++.|.++++.-+|+-.|||..
T Consensus 68 aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 8988754443321 12688899998888878888999974
No 95
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=91.29 E-value=0.2 Score=53.30 Aligned_cols=126 Identities=15% Similarity=0.222 Sum_probs=76.9
Q ss_pred CceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhh-c--ccCC---CCCH
Q 010939 237 DQRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H--EHEP---VKEL 309 (497)
Q Consensus 237 d~riv~~GAGsA-g~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a-~--~~~~---~~~L 309 (497)
..||.|+|||+. +.++|..|+.. ..++. ...++++|.+- ++.+.+.+....+. . .+.. .+++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01442 25799999863 22111112112221 1 1111 2589
Q ss_pred HHHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 310 VDAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 310 ~e~v~~vkptvLIG~S~~~g~----------------------------------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
.+++++ +|++|=+.+.++. .=.++++.|.++|..-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999998 9999866554321 1358899999999999999999997
Q ss_pred CCCCCCHHHHhccccCcEEEecC
Q 010939 356 SQSECTAEEAYTWSQGRAIFASG 378 (497)
Q Consensus 356 ~~~E~~peda~~~t~Grai~AsG 378 (497)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 3444455555333466554
No 96
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.12 E-value=2.5 Score=42.40 Aligned_cols=93 Identities=17% Similarity=0.220 Sum_probs=62.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHH
Q 010939 232 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 311 (497)
Q Consensus 232 g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 311 (497)
+.+|.+.+|.|+|.|..|..+|..+.. .|+ +++.+|+.. .. + .. ..+ .-...+|.|
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~-~---~~-~~~---g~~~~~l~~ 200 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKG-----FNM-------RILYYSRTR----KE-E---VE-REL---NAEFKPLED 200 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CH-H---HH-HHH---CCEECCHHH
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEECCCc----ch-h---hH-hhc---CcccCCHHH
Confidence 457899999999999999999998864 263 688888752 10 0 00 011 011247889
Q ss_pred HHhccCCcEEEEcc-CC---CCCCCHHHHHHHHccCCCceEEecCC
Q 010939 312 AVNAIKPTILIGTS-GQ---GRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 312 ~v~~vkptvLIG~S-~~---~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
+++. .|+++=.- .. .++++++.++.|. +..++.-.|.
T Consensus 201 ~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 201 LLRE--SDFVVLAVPLTRETYHLINEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred HHhh--CCEEEECCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 8887 89887432 21 2578888888884 5667776664
No 97
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.01 E-value=0.38 Score=46.90 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=57.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CCcccCC-CccCCchh-chhhhcccCCCC--CHHHH
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSS-RLESLQHF-KKPWAHEHEPVK--ELVDA 312 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~--~GLi~~~-r~~~l~~~-k~~~a~~~~~~~--~L~e~ 312 (497)
||.|+|+|.-|..+|..|... | .+++++|+ +.--.+. +....... ...+ ....... ++.|+
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 68 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEILKSISAGREHPRLGVKL-NGVEIFWPEQLEKC 68 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHHHHHHHTTCCBTTTTBCC-CSEEEECGGGHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHHHHHHHHhCcCcccCccc-cceEEecHHhHHHH
Confidence 799999999999999988754 5 47888887 3210000 00000000 0000 0000113 67787
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 313 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
++. +|++| ++..+ -..+++++.++...+..+|..++|-.
T Consensus 69 ~~~--~D~vi-~~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 69 LEN--AEVVL-LGVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp HTT--CSEEE-ECSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred Hhc--CCEEE-EcCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 775 88777 33333 26688888876633356788888865
No 98
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.94 E-value=0.25 Score=49.41 Aligned_cols=100 Identities=22% Similarity=0.343 Sum_probs=62.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc----CCchhchhhhcccC-CCCCHHHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHE-PVKELVDA 312 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~----~l~~~k~~~a~~~~-~~~~L~e~ 312 (497)
.||.|+|||..|..+|-+|.. .|+ ...++++|.+ .++.+ +|.+.. +|.++.. ..++ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 589999999999998887654 254 2589999986 22211 111111 1221110 0123 556
Q ss_pred HhccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCceEEecCCCC
Q 010939 313 VNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~F--------------teevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+++ +|++|=+.+.+.-- -+++++.|.+++..-+|+-.|||.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 776 99988555443211 168899999999999999999996
No 99
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.77 E-value=0.18 Score=49.34 Aligned_cols=103 Identities=17% Similarity=0.280 Sum_probs=61.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc-hhchhhhcccC-CC-CCHHHHH
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAHEHE-PV-KELVDAV 313 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~-~~k~~~a~~~~-~~-~~L~e~v 313 (497)
..||.|+|||+.|..+|..|... |. ..+++++|++---.++ ..+. .+..++..+.. .. .+. +++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHh
Confidence 35999999999999999888642 53 1479999986310000 0010 01111211100 00 132 455
Q ss_pred hccCCcEEEEccCCCCCCCH----------------HHHHHHHccCCCceEEecCCCCC
Q 010939 314 NAIKPTILIGTSGQGRTFTK----------------EVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g~Fte----------------evi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
+. +|++|=+.+.+. ++ ++++.|+++++..+|+.++||..
T Consensus 74 ~~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RD--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp TT--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CC--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 54 898875443331 23 88999988888889999999973
No 100
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.64 E-value=0.24 Score=50.18 Aligned_cols=106 Identities=17% Similarity=0.265 Sum_probs=65.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
..||.++|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|..+..-..+..+++++
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC-
Confidence 46999999999999999888764 55 258999998411111000012222 1232111111233466776
Q ss_pred CCcEEEEccCCC---C-----CC------CHHHHHHHHccCCCceEEecCCCC
Q 010939 317 KPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 317 kptvLIG~S~~~---g-----~F------teevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+|++|=+.+.+ | +| -+++++.|.+++..-+|+-.|||.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 88877444433 1 23 258889999999999999999997
No 101
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.63 E-value=0.46 Score=46.12 Aligned_cols=83 Identities=20% Similarity=0.353 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhh
Q 010939 221 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300 (497)
Q Consensus 221 lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a 300 (497)
..|++.+++-.|.++++.|++|+|+|.+|.++|..|... |. +++++|+.- .+ . +.++
T Consensus 113 ~~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~~----~~---~----~~l~ 169 (275)
T 2hk9_A 113 WIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRTK----EK---A----IKLA 169 (275)
T ss_dssp HHHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSH----HH---H----HHHT
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECCH----HH---H----HHHH
Confidence 348888888888899999999999999999999888653 52 688888751 11 1 1122
Q ss_pred cc--cCCCCCHHHHHhccCCcEEEEccCCC
Q 010939 301 HE--HEPVKELVDAVNAIKPTILIGTSGQG 328 (497)
Q Consensus 301 ~~--~~~~~~L~e~v~~vkptvLIG~S~~~ 328 (497)
+. .....++.++++. +|++|-+...+
T Consensus 170 ~~~g~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 170 QKFPLEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp TTSCEEECSCGGGTGGG--CSEEEECSSTT
T ss_pred HHcCCeeehhHHhhhcC--CCEEEEeCCCC
Confidence 11 0011267777765 99999665543
No 102
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.58 E-value=0.17 Score=42.48 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=52.0
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHH-
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA- 312 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~- 312 (497)
++..+|+|+|+|..|..+++.|.. .| .+++++|++- .+.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 456789999999999999888864 25 3578888752 111111111001111 11111123222
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 313 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 489998655432012223444444445556666666665
No 103
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.57 E-value=0.19 Score=47.82 Aligned_cols=99 Identities=16% Similarity=0.259 Sum_probs=61.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHH
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 312 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 312 (497)
.++...||.|+|+|..|..+|..+... |. +.++++|++. +.+......+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 63 3477888641 1111111111 00112466676
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 313 VNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
++. +|++|= +..... .+++++.+.+.. +..+|.-+||-.
T Consensus 66 ~~~--~Dvvi~-av~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NPY--AKLYIV-SLKDSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CSC--CSEEEE-CCCHHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hcC--CCEEEE-ecCHHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 664 898884 333333 388888887654 567888888854
No 104
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=90.54 E-value=0.93 Score=45.26 Aligned_cols=113 Identities=19% Similarity=0.189 Sum_probs=68.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 301 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 301 (497)
++.+++..... ....++.|+|+|..|-.++..+... .++ ++++++|+. ..+ .......|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 45566665543 3567999999999998888877653 233 678888874 222 2222222221
Q ss_pred ---ccCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHccCCCceEEecC--CCCCCCCCCHHH
Q 010939 302 ---EHEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLS--NPTSQSECTAEE 364 (497)
Q Consensus 302 ---~~~~~~~L~e~v~~vkptvLIG~S~~~-g~Fteevi~~Ma~~~~rPIIFaLS--NPt~~~E~~ped 364 (497)
+.. ..++.|++ . .|++|=++..+ .+++.+++ .+.-.|+.++ +|. +-|+.++-
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~~ 230 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVEI 230 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHHH
Confidence 112 46899998 5 89998665432 23443332 2456888883 455 67887653
No 105
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.51 E-value=1.2 Score=41.78 Aligned_cols=92 Identities=12% Similarity=0.225 Sum_probs=61.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
..||.|+|+|.-|..+|..|... |.. ...+++++|+. ..+ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 45899999999999999988754 521 01368888874 111 0 00012467788876
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010939 317 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 317 kptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
+|++| ++..+ -..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 88776 34333 357888888876666667888888774
No 106
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=90.41 E-value=1.7 Score=43.37 Aligned_cols=122 Identities=15% Similarity=0.202 Sum_probs=78.0
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcChHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~~---------------------g~~l~d~riv~~GAGsAg~Gia~ll~~~ 259 (497)
..+++.|--- +.+|=-+++.+|+..|-. |..|.+.+|.|+|.|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 4677777543 334444788888887622 356889999999999999999998754
Q ss_pred HHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHH
Q 010939 260 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEV 335 (497)
Q Consensus 260 ~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteev 335 (497)
.|+ +++.+|+.. .+ ....+ .+ .-...++.|+++. .|+++=.-. ..++++++.
T Consensus 177 ----~G~-------~V~~~d~~~----~~---~~~~~-~~---g~~~~~l~e~l~~--aDvVi~~vp~~~~t~~~i~~~~ 232 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGRQ----PR---PEEAA-EF---QAEFVSTPELAAQ--SDFIVVACSLTPATEGLCNKDF 232 (330)
T ss_dssp ----GTC-------CEEEEESSS----CC---HHHHH-TT---TCEECCHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEECCCC----cc---hhHHH-hc---CceeCCHHHHHhh--CCEEEEeCCCChHHHHhhCHHH
Confidence 364 588888741 11 11100 11 0011278888887 898874321 235788888
Q ss_pred HHHHHccCCCceEEecCC
Q 010939 336 VEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 336 i~~Ma~~~~rPIIFaLSN 353 (497)
++.|. +..++.-.|.
T Consensus 233 ~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 233 FQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHSC---TTCEEEECSC
T ss_pred HhcCC---CCcEEEECCC
Confidence 88874 4567665555
No 107
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.32 E-value=0.39 Score=48.08 Aligned_cols=104 Identities=21% Similarity=0.299 Sum_probs=65.2
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhh-hcccCCCCCHHHHHhc
Q 010939 238 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-AHEHEPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~-a~~~~~~~~L~e~v~~ 315 (497)
.||+|.| +|..|..++..|.+ .|+ ...++++|.+.- .+...+|.+...+. .+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999887753 353 256999996421 00000011100000 0000011367889988
Q ss_pred cCCcEEEEccCCCC--------------CCCHHHHHHHHccCCCceEEecCCCC
Q 010939 316 IKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 316 vkptvLIG~S~~~g--------------~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
.|++|=+.+.+. -.++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886655432 24667888888889889999999997
No 108
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.08 E-value=0.65 Score=49.09 Aligned_cols=102 Identities=13% Similarity=0.160 Sum_probs=63.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 312 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~ 312 (497)
.++..+|.|+|+|.-|..+|..|.+ .|. +++++|+. . +........... .-....++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~-----~G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIES-----RGY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHh-----CCC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 3667899999999999999999875 363 57777764 1 111111111000 00113578888
Q ss_pred Hhcc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 313 VNAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~v-kptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
++.. ++|++| ++-+.+...+++++.+..+- +.-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 478777 55544456788888887654 356888888865
No 109
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.92 E-value=0.3 Score=48.81 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=34.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
++|++.||+++|+|..|.-+|..|+.+ |+ ++|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 468999999999999999999999876 76 799999987
No 110
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=89.90 E-value=0.54 Score=49.08 Aligned_cols=124 Identities=13% Similarity=0.174 Sum_probs=76.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHH-hcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccC---CCCCHHHHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISK-QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE---PVKELVDAV 313 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~-~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~---~~~~L~e~v 313 (497)
.||.|+|||+. .+..++..+.. ..++. ...++++|.+- +|.+..........+... ..+++.|++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 55555444443 23442 36799999752 221101111111111111 125788999
Q ss_pred hccCCcEEEEccCCCC---------------CC-------------------CHHHHHHHHccCCCceEEecCCCCCCCC
Q 010939 314 NAIKPTILIGTSGQGR---------------TF-------------------TKEVVEAMASLNEKPIIFSLSNPTSQSE 359 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g---------------~F-------------------teevi~~Ma~~~~rPIIFaLSNPt~~~E 359 (497)
++ +|++|=..++++ ++ =.++++.|.++| .-+++-.|||. -
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv---d 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS---G 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH---H
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH---H
Confidence 98 999997776653 22 258999999999 99999999997 2
Q ss_pred CCHHHHhccccCcEEEecC
Q 010939 360 CTAEEAYTWSQGRAIFASG 378 (497)
Q Consensus 360 ~~peda~~~t~Grai~AsG 378 (497)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 3444455666432466654
No 111
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.86 E-value=0.3 Score=53.71 Aligned_cols=38 Identities=26% Similarity=0.432 Sum_probs=33.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+|++.||+++|||..|..+|+.|+.+ |+ ++|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 57788999999999999999999875 86 7999999973
No 112
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.78 E-value=0.39 Score=49.02 Aligned_cols=95 Identities=17% Similarity=0.288 Sum_probs=61.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc----cCCCCCH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE----HEPVKEL 309 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~----~~~~~~L 309 (497)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|++. .+ +...+..+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4788999999999999999988764 262 688888751 11 11111111110 0112357
Q ss_pred HHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHccCCCceEEecC
Q 010939 310 VDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 310 ~e~v~~vkptvLIG~S~~~-----g~Fteevi~~Ma~~~~rPIIFaLS 352 (497)
.+.++. .|++|.+...+ .+++++.++.|. +.-+|.=+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEe
Confidence 788876 99999876544 457888888885 445565555
No 113
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.75 E-value=0.49 Score=47.75 Aligned_cols=106 Identities=16% Similarity=0.284 Sum_probs=65.2
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC---CCHHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV---KELVD 311 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~---~~L~e 311 (497)
++..||.|+|||..|.++|.+|.. .|+ + ++.++|.+-=..++-..+|.+. ..+......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 556799999999999999988865 365 1 6999998521111000012211 1122111121 344 7
Q ss_pred HHhccCCcEEEEccCC---CCC-----C------CHHHHHHHHccCCCceEEecCCCC
Q 010939 312 AVNAIKPTILIGTSGQ---GRT-----F------TKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 312 ~v~~vkptvLIG~S~~---~g~-----F------teevi~~Ma~~~~rPIIFaLSNPt 355 (497)
++++ +|++|=+.+. +|- | -+++++.|.+++..-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 8887 8988754443 232 1 247778888999999999999996
No 114
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=89.73 E-value=2.3 Score=43.32 Aligned_cols=192 Identities=16% Similarity=0.140 Sum_probs=111.8
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~---------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~ 259 (497)
..|++.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 3455555432 34555678888887763 25678999999999999999999998642
Q ss_pred HHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHH
Q 010939 260 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEV 335 (497)
Q Consensus 260 ~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteev 335 (497)
|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- ..++|+++.
T Consensus 196 -----G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 196 -----GL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp -----TC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred -----CC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 64 6888887531 010 01111112589999987 899884321 237899999
Q ss_pred HHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCC-CCccccCCeeeCCCCccccccchhhhHHHHHcCC
Q 010939 336 VEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP-FDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGA 414 (497)
Q Consensus 336 i~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsP-f~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a 414 (497)
++.|. +.-|+.=.|.-..--|-.-.+|+ .+|+.-.| |.. |.+-- .....--+..|..+-|=+|-....+
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA-~LDVf~~EP--~~~~pL~~~~nvilTPHia~~t~e~-- 319 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEAL--RSKHLFAA-GLDVFANEP--AIDPRYRSLDNIFLTPHIGSATHET-- 319 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEE-EESCCTTTT--SCCTTGGGCTTEEECCSCTTCBHHH--
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCceEE-EecCCCCCC--CCCchHHhCCCEEEcCccCcCCHHH--
Confidence 99995 67788877764422232233333 34654332 211 10000 0001112456888888765322211
Q ss_pred cccCHHHHHHHHHHHhccCC
Q 010939 415 IRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 415 ~~itd~m~~aAA~aLA~~v~ 434 (497)
...|...+++.|.....
T Consensus 320 ---~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 320 ---RDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp ---HHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHc
Confidence 24566666666666554
No 115
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=89.70 E-value=1.1 Score=44.44 Aligned_cols=109 Identities=14% Similarity=0.166 Sum_probs=64.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 301 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 301 (497)
++.+++.... +....+|.|+|+|..|..++..+... .|+ ++++++|+. ..+ . +.|++
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~----~~l~~ 178 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---A----EKFAD 178 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---H----HHHHH
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---H----HHHHH
Confidence 4555554442 45667999999999999999888653 253 578888874 111 1 12322
Q ss_pred c----cCCCCCHHHHHhccCCcEEEEccCC-CCCCCHHHHHHHHccCCCceEEecCC--CCCCCCCCH
Q 010939 302 E----HEPVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTA 362 (497)
Q Consensus 302 ~----~~~~~~L~e~v~~vkptvLIG~S~~-~g~Fteevi~~Ma~~~~rPIIFaLSN--Pt~~~E~~p 362 (497)
. .....++.|+++. +|++|=+... ..+|.+++ ..+.-+|+.+|+ |. .-|+.+
T Consensus 179 ~~~~~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~~------l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 179 TVQGEVRVCSSVQEAVAG--ADVIITVTLATEPILFGEW------VKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp HSSSCCEECSSHHHHHTT--CSEEEECCCCSSCCBCGGG------SCTTCEEEECCCCSTT-CCSBCH
T ss_pred HhhCCeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHHH------cCCCcEEEeCCCCCCC-ceeccH
Confidence 2 1124689999987 8988844321 22343321 234567887743 53 355554
No 116
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=89.68 E-value=1.9 Score=43.47 Aligned_cols=108 Identities=15% Similarity=0.269 Sum_probs=73.2
Q ss_pred hhHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE
Q 010939 216 TASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW 276 (497)
Q Consensus 216 Ta~V~lAgll~Al~~-------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~ 276 (497)
+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+.. .|+ +++
T Consensus 124 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~ 191 (333)
T 3ba1_A 124 VADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PIS 191 (333)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEE
Confidence 344467777776552 2467899999999999999999998864 364 588
Q ss_pred EEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCceEEecC
Q 010939 277 LVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 277 ~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~Ma~~~~rPIIFaLS 352 (497)
.+|+..- . ... + ....+|.|+++. .|+++=.- ...++++++.++.|. +..+|.-.|
T Consensus 192 ~~dr~~~----~---~~g----~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~s 251 (333)
T 3ba1_A 192 YFSRSKK----P---NTN----Y----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIG 251 (333)
T ss_dssp EECSSCC----T---TCC----S----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECS
T ss_pred EECCCch----h---ccC----c----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECC
Confidence 8887521 1 110 1 012578898887 89887442 123688899999884 566777666
Q ss_pred CCC
Q 010939 353 NPT 355 (497)
Q Consensus 353 NPt 355 (497)
.-.
T Consensus 252 rG~ 254 (333)
T 3ba1_A 252 RGP 254 (333)
T ss_dssp CGG
T ss_pred CCc
Confidence 643
No 117
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.61 E-value=0.4 Score=47.28 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=59.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC--------cccCCCccCCchhchhhhcccCCCCCH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--------LIVSSRLESLQHFKKPWAHEHEPVKEL 309 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G--------Li~~~r~~~l~~~k~~~a~~~~~~~~L 309 (497)
.||.|+|+|+-|..+|..|... | .+++++|+.- +...++ .....+ + ++.....++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 5899999999999999988653 5 4788888863 111100 000000 0 000111345
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010939 310 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 356 (497)
Q Consensus 310 ~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt~ 356 (497)
.++.+ .+|++| ++... -.++++++.++.+. +..+|+.+.|--.
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55443 378877 55544 34668999988653 4567888999763
No 118
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=89.56 E-value=2.1 Score=42.49 Aligned_cols=109 Identities=17% Similarity=0.230 Sum_probs=74.2
Q ss_pred chhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE
Q 010939 215 GTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW 276 (497)
Q Consensus 215 GTa~V~lAgll~Al~~------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~ 276 (497)
.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |+ +++
T Consensus 102 ~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~ 169 (307)
T 1wwk_A 102 SVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NIL 169 (307)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEE
Confidence 3444577778877662 34679999999999999999999988642 64 688
Q ss_pred EEccCCcccCCCccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCceEEec
Q 010939 277 LVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSL 351 (497)
Q Consensus 277 ~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteevi~~Ma~~~~rPIIFaL 351 (497)
.+|+.. . + ..+.+ .-...+|.|+++. .|+++=.-- ..++++++.++.|. +.-++.=.
T Consensus 170 ~~d~~~----~------~---~~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~ 231 (307)
T 1wwk_A 170 LYDPYP----N------E---ERAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINT 231 (307)
T ss_dssp EECSSC----C------H---HHHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEEC
T ss_pred EECCCC----C------h---hhHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEEC
Confidence 888741 1 1 01111 0112378899886 898885421 23678899999885 56677777
Q ss_pred CC
Q 010939 352 SN 353 (497)
Q Consensus 352 SN 353 (497)
|.
T Consensus 232 ar 233 (307)
T 1wwk_A 232 SR 233 (307)
T ss_dssp SC
T ss_pred CC
Confidence 77
No 119
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.53 E-value=0.39 Score=47.58 Aligned_cols=99 Identities=23% Similarity=0.322 Sum_probs=60.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCC----chhchhhhcccCC---CCCHHH
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL----QHFKKPWAHEHEP---VKELVD 311 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l----~~~k~~~a~~~~~---~~~L~e 311 (497)
||.|+|||+.|.++|..|... ++ -.+++++|++- ++.+.+ .+. ..+...... ..++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~~~ 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYES-GPVGLFDTKVTGSNDYAD 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTT-HHHHTCCCEEEEESCGGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhh-hhcccCCcEEEECCCHHH
Confidence 799999999999999887642 22 25799999862 221111 111 011100111 145655
Q ss_pred HHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 312 AVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 312 ~v~~vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+++ +|++|=+-+.+ |- .-+++.+.|+++++.-+|+-.|||.
T Consensus 67 -l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 -TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp -GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred -HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 666 89887554332 21 1157788888888888888899996
No 120
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=89.43 E-value=0.25 Score=49.70 Aligned_cols=89 Identities=21% Similarity=0.316 Sum_probs=54.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc----ccCCCCCHHHHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKELVDAV 313 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~----~~~~~~~L~e~v 313 (497)
.||+++|||-.|--+|+.|.+ ..++.+.|+.. +.+...+ +++. +.....+|.+.+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHH
Confidence 379999999988877776632 14577777641 1121111 1221 122235688888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 314 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
+. .|++|-+ .|+-+..+++++-.++..+ ++-+|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g~~--yvD~s~ 109 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSKVD--MVDVSF 109 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHTCE--EEECCC
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcCcc--eEeeec
Confidence 86 8998854 4556888888887765543 555664
No 121
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.42 E-value=0.32 Score=42.26 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=26.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 59999999999999998875 385 58888874
No 122
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.25 E-value=0.4 Score=47.70 Aligned_cols=103 Identities=19% Similarity=0.234 Sum_probs=64.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCC---CCCHHHHHhc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVNA 315 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~---~~~L~e~v~~ 315 (497)
||.|+|||..|.++|..|... |+ ..++.++|.+-=..++-.-++.+....|-.+ .. ..+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~-~~i~~t~d-~~a~~~ 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKY-PKIVGGAD-YSLLKG 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCC-CEEEEESC-GGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCC-CEEEEeCC-HHHhCC
Confidence 799999999999999887653 54 2479999985211110000122211112111 11 135 778887
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 316 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 316 vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+|++|=+.+.+ |- .-+++++.|.+++..-+|+-.|||.
T Consensus 70 --aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp --CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred --CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 89887444433 32 1247778899999999999999997
No 123
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=89.24 E-value=2.2 Score=43.28 Aligned_cols=176 Identities=18% Similarity=0.203 Sum_probs=93.5
Q ss_pred hhHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 010939 216 TASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 275 (497)
Q Consensus 216 Ta~V~lAgll~Al~~--------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i 275 (497)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 445567777776652 2467999999999999999999998864 264 58
Q ss_pred EEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCceEEec
Q 010939 276 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSL 351 (497)
Q Consensus 276 ~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteevi~~Ma~~~~rPIIFaL 351 (497)
+.+|+.. .. .. .+ ....+|.|+++. .|+++=.-- ..++++++.++.|. +.-++.=.
T Consensus 198 ~~~dr~~----~~--~~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRST----LS--GV-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSC----CT--TS-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCc----cc--cc-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8888742 11 00 01 113689999987 999884321 23678899999885 66788878
Q ss_pred CCCCCCCCCCHHHHhccccCcEEEecCCCC--CccccCCeeeCCCCccccccchhhhHHHHHcCCcccCHHHHHHHHHHH
Q 010939 352 SNPTSQSECTAEEAYTWSQGRAIFASGSPF--DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEAL 429 (497)
Q Consensus 352 SNPt~~~E~~peda~~~t~Grai~AsGsPf--~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~m~~aAA~aL 429 (497)
|.-..--|-.-.+|++ +|+.-.|.=-=| +|.. + ..--+..|..+-|=+|-....+ ...|...+++.|
T Consensus 258 aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~-~---~~L~~~~nvilTPHia~~t~e~-----~~~~~~~~~~nl 326 (340)
T 4dgs_A 258 ARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAI-R---SEFHTTPNTVLMPHQGSATVET-----RMAMGKLVLANL 326 (340)
T ss_dssp SCC----------------CCSSEEEESCCSSSSSC-C---SHHHHSSSEEECSSCSSCCHHH-----HHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCC-c---cchhhCCCEEEcCcCCcCCHHH-----HHHHHHHHHHHH
Confidence 7754333444444443 354322211001 0100 0 0112455777777665322221 244555556666
Q ss_pred hccCC
Q 010939 430 AGQVT 434 (497)
Q Consensus 430 A~~v~ 434 (497)
.+...
T Consensus 327 ~~~~~ 331 (340)
T 4dgs_A 327 AAHFA 331 (340)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 55543
No 124
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.22 E-value=2.4 Score=43.26 Aligned_cols=173 Identities=15% Similarity=0.095 Sum_probs=102.0
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 260 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~--------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~ 260 (497)
..|.+.|--- +.+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~- 186 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF- 186 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC-
Confidence 4566665322 23444577888887752 25689999999999999999999988642
Q ss_pred HHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc--cCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHH
Q 010939 261 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE--HEPVKELVDAVNAIKPTILIGTS----GQGRTFTKE 334 (497)
Q Consensus 261 ~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~--~~~~~~L~e~v~~vkptvLIG~S----~~~g~Ftee 334 (497)
|+ +++.+|+... +. ..+.. .....+|.|+++. .|+++=.- ...++|+++
T Consensus 187 ----G~-------~V~~~dr~~~---------~~---~~~~~~g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~ 241 (351)
T 3jtm_A 187 ----GC-------NLLYHDRLQM---------AP---ELEKETGAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKE 241 (351)
T ss_dssp ----CC-------EEEEECSSCC---------CH---HHHHHHCCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHH
T ss_pred ----CC-------EEEEeCCCcc---------CH---HHHHhCCCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHH
Confidence 64 5887887521 00 01111 1123689999988 99988331 223689999
Q ss_pred HHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcccc-CCeeeCCCCccccccchhhhHHH
Q 010939 335 VVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGL 409 (497)
Q Consensus 335 vi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~-~G~~~~p~Q~NN~~iFPGiglG~ 409 (497)
.++.|. +.-++.=.|+-..--|-.-.+|+ .+|+.--|.--=|.+--. ... .--+..|..+-|=++-..
T Consensus 242 ~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~ga~lDV~~~EP~~~~~--pL~~~~nvilTPHia~~t 310 (351)
T 3jtm_A 242 LIGKLK---KGVLIVNNARGAIMERQAVVDAV--ESGHIGGYSGDVWDPQPAPKDH--PWRYMPNQAMTPHTSGTT 310 (351)
T ss_dssp HHHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCSSSSCCTTC--GGGTSTTBCCCCSCGGGS
T ss_pred HHhcCC---CCCEEEECcCchhhCHHHHHHHH--HhCCccEEEeCCCCCCCCCCCC--hhhcCCCEEECCcCCCCC
Confidence 999995 67788878774422333333444 346544332211111000 000 011355777777765443
No 125
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.11 E-value=0.55 Score=46.61 Aligned_cols=103 Identities=19% Similarity=0.281 Sum_probs=61.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCC---CCCHHHHHh
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVN 314 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~---~~~L~e~v~ 314 (497)
.||.|+|||..|.++|..+.. .|+ . +++++|.+-=-.++...++.+... +...... .+++ ++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~~-~~~~~~~i~~t~d~-~a~~ 69 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEASP-IEGFDVRVTGTNNY-ADTA 69 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTHH-HHTCCCCEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhHh-hcCCCeEEEECCCH-HHHC
Confidence 489999999999999998754 364 1 399999751000000001211111 1111111 1466 7787
Q ss_pred ccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 315 AIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~--------------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+ .|++|=+.+.+.. .-+++.+.+.++++.-+|+--|||.
T Consensus 70 ~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 70 N--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp T--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 7 8999865544321 1247788888888888887789997
No 126
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=89.05 E-value=0.19 Score=50.18 Aligned_cols=105 Identities=18% Similarity=0.281 Sum_probs=63.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 317 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 317 (497)
.||.|+|||+.|..++-+|+.. ++ ...++++|.+-=-.++...+|.+. .+|.++..-..+-.+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~~~a~~~-- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGSYGDLEG-- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECCHHHhCC--
Confidence 3899999999999988876542 44 258999998620000000012211 1222111000122566777
Q ss_pred CcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 318 PTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 318 ptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+|++|=+.+.+ |- .-+++++.|.+++..-+|+-.|||.
T Consensus 68 aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 68 ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 89988444433 32 1246778888889999999999996
No 127
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.96 E-value=0.63 Score=44.52 Aligned_cols=81 Identities=23% Similarity=0.399 Sum_probs=54.0
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 301 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 301 (497)
.|++.+++-.+.++++ |++|+|+|.+|..+|..|.. .|. +++++|++- .+ .......+..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~~----~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRTP----QR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSH----HH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999888764 252 588888751 11 1111111111
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC
Q 010939 302 EHEPVKELVDAVNAIKPTILIGTSGQG 328 (497)
Q Consensus 302 ~~~~~~~L~e~v~~vkptvLIG~S~~~ 328 (497)
. ..++.++ +. +|++|-+...+
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSSTT
T ss_pred c---hhhHhhc-cC--CCEEEEccCCC
Confidence 1 3456666 54 89998665543
No 128
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=88.93 E-value=1.8 Score=44.17 Aligned_cols=145 Identities=13% Similarity=0.159 Sum_probs=89.8
Q ss_pred eeeecCCCCcH-HHHHHHHcCCCCceecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCCceE
Q 010939 185 IQFEDFANHNA-FDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRF 240 (497)
Q Consensus 185 I~~EDf~~~~a-f~iL~ryr~~~~~FnDDi---QGTa~V~lAgll~Al~~--------------------~g~~l~d~ri 240 (497)
|+.-..+..|- .+-+.+.+..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 56555555553 222222222566666432 33444578888887762 3678999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcE
Q 010939 241 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTI 320 (497)
Q Consensus 241 v~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptv 320 (497)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... . .... ..+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~----~---~~~~-~~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL----P---KDAE-EKV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC----C---HHHH-HHT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc----c---hhHH-Hhc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998854 264 33888886421 0 1100 011 00112579999886 899
Q ss_pred EEEccCC----CCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 321 LIGTSGQ----GRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 321 LIG~S~~----~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
++=.--. .++++++.++.|. +.-++.-.|+-.
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG~ 260 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARGA 260 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCGG
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCCc
Confidence 8854221 2688999888885 667888787743
No 129
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.88 E-value=0.36 Score=47.73 Aligned_cols=97 Identities=18% Similarity=0.339 Sum_probs=54.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhch-hhhc----ccCCCCCHHH
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAH----EHEPVKELVD 311 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-~~a~----~~~~~~~L~e 311 (497)
+.||.|+|+|+-|..+|..|..+ | .+++++|+..- +.+.+..... .+-. ......++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----IVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----HHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----HHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 56999999999999999998763 5 46888887411 0000111000 0000 0001135555
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010939 312 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 312 ~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
++. +|++| ++-.+ -..+++++.++. +..+|..++|...
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~ 115 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIE 115 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCC
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCC
Confidence 544 67655 33322 466777766654 5557778888654
No 130
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.86 E-value=0.41 Score=46.67 Aligned_cols=117 Identities=19% Similarity=0.209 Sum_probs=72.0
Q ss_pred HHhhhcCCCCCceeeEEeccCCCccccccCcccccccccCcchhhhHHHHHHHHHHHHH-hhCCCcceeeecCCCCcHHH
Q 010939 119 LYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQ-NYGERILIQFEDFANHNAFD 197 (497)
Q Consensus 119 Ly~a~gGi~P~~~lPi~LDvgtnn~~Ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~-~fGp~~lI~~EDf~~~~af~ 197 (497)
.|..+ |+| ..-+.+|+. .++ +.++++.++. .|.+ ++..==-..++++
T Consensus 33 ~~~~~-gi~---~~y~~~~~~--~~~-----------------------l~~~i~~l~~~~~~G---~nVtiP~k~~i~~ 80 (287)
T 1nvt_A 33 AFKDK-GLN---YVYVAFDVL--PEN-----------------------LKYVIDGAKALGIVG---FNVTIPHKIEIMK 80 (287)
T ss_dssp HHHHT-TCC---EEEEEEECC--GGG-----------------------GGGHHHHHHHHTCCE---EEECTTSTTGGGG
T ss_pred HHHHc-CCC---cEEEEEEcC--HHH-----------------------HHHHHHHHHhCCCCE---EEEccCCHHHHHH
Confidence 45555 898 778888874 344 3566666654 4544 4443222233444
Q ss_pred HHHHH----c--C--CCCceecC-ccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCCh
Q 010939 198 LLEKY----G--T--THLVFNDD-IQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPL 268 (497)
Q Consensus 198 iL~ry----r--~--~~~~FnDD-iQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~ 268 (497)
++++. + . +..+++|. ..|+- ....|++.+++..+.++++.+++|+|||.+|.++|..|.+ .|
T Consensus 81 ~~d~~~~~a~~igavnt~~~~~g~l~g~n-Td~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--- 151 (287)
T 1nvt_A 81 YLDEIDKDAQLIGAVNTIKIEDGKAIGYN-TDGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--- 151 (287)
T ss_dssp GCSEECHHHHHHTCCCEEEEETTEEEEEC-CHHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS---
T ss_pred HHHhcCHHHHHhCceeeEEeeCCEEEEec-CCHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC---
Confidence 44311 1 1 22233443 24522 2678999999988889999999999999777777666643 12
Q ss_pred hhhcCeEEEEccC
Q 010939 269 EETRKKIWLVDSK 281 (497)
Q Consensus 269 eeA~~~i~~vD~~ 281 (497)
+++++|++
T Consensus 152 -----~V~v~~r~ 159 (287)
T 1nvt_A 152 -----NIIIANRT 159 (287)
T ss_dssp -----EEEEECSS
T ss_pred -----CEEEEECC
Confidence 68888875
No 131
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=88.84 E-value=0.38 Score=52.78 Aligned_cols=38 Identities=26% Similarity=0.442 Sum_probs=33.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|++.||+++|||..|..+|..|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 467888999999999999999999865 86 799999987
No 132
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=88.77 E-value=1.9 Score=43.48 Aligned_cols=189 Identities=16% Similarity=0.231 Sum_probs=112.1
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 262 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~ 262 (497)
..|++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777542 33444567777777642 26679999999999999999999988643
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 010939 263 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 338 (497)
Q Consensus 263 ~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~ 338 (497)
|+ +++.+|+..- ..+.+.. .+ ...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 160 --G~-------~V~~~dr~~~----~~~~~~~---~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----PADHFHE---TV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----CCTTCSE---EE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----hhHhHhh---cc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 64 6888887531 1011111 01 12578888887 89888431 2246899999988
Q ss_pred HHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEe-----cCCCCCccccCCeeeCCCCccccccchhhhHHHHHcC
Q 010939 339 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSG 413 (497)
Q Consensus 339 Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~A-----sGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~ 413 (497)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.| ..-|.++- ..-=+..|..+-|=++-.
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~~------~pL~~~~nvilTPHia~~----- 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPTD------HPLWQRDDVLITPHISGQ----- 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCTT------CGGGGCSSEEECCSCTTC-----
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCCC------ChhhcCCCEEEcCccccC-----
Confidence 85 667888777744223333333433 3543222 11121110 001245688888876532
Q ss_pred CcccCHHHHHHHHHHHhccCC
Q 010939 414 AIRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 414 a~~itd~m~~aAA~aLA~~v~ 434 (497)
...-.+.|...+++-|.....
T Consensus 281 t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh
Confidence 222346677777777766653
No 133
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=88.66 E-value=2.8 Score=42.04 Aligned_cols=137 Identities=10% Similarity=0.102 Sum_probs=87.7
Q ss_pred eeeecCCCCcHHHHHHHHcCCCCceecCcc---chhHHHHHHHHHHHHH-------------------hCCCCCCceEEE
Q 010939 185 IQFEDFANHNAFDLLEKYGTTHLVFNDDIQ---GTASVVLAGLISAMKF-------------------LGGSLADQRFLF 242 (497)
Q Consensus 185 I~~EDf~~~~af~iL~ryr~~~~~FnDDiQ---GTa~V~lAgll~Al~~-------------------~g~~l~d~riv~ 242 (497)
|+.--.+..|- ++-.--+..+.+.|---. .+|=-+++.+|+..|- .+..|.+.++.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55544544442 111111246777665333 3444578888887761 235688999999
Q ss_pred eCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEE
Q 010939 243 LGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILI 322 (497)
Q Consensus 243 ~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLI 322 (497)
+|.|..|..+|+.+... |+ +++.+|+.. .. .+. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~--~~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK--GIE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC--SCT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH--HHH----hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999988642 64 588888752 11 111 1111 2478999987 89988
Q ss_pred Ec----cCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 323 GT----SGQGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 323 G~----S~~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
=. ....++++++.++.|. +.-++.=.|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 63 1224689999999885 5678887875
No 134
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.65 E-value=1.5 Score=44.66 Aligned_cols=96 Identities=11% Similarity=0.217 Sum_probs=61.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc-cCCCCCHHHHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAV 313 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v 313 (497)
++..||.|+|.|.-|..+|..|... | -+++++|+. ..+ + ..++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~~---~----~~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VNA---V----QALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HHH---H----HHHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HHH---H----HHHHHCCCEEeCCHHHHH
Confidence 4567999999999999999988763 6 367777764 111 1 122221 12236888888
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 314 NAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 314 ~~v-kptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
+.. +||++| ++-..+ -.+++++.+..+- +.-||.-+||-.
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 874 568777 444344 6778888877653 566777777743
No 135
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.62 E-value=0.63 Score=47.04 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=26.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
-.||.|+|||.-|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 35899999999999999888764 75 57888864
No 136
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.45 E-value=0.32 Score=48.97 Aligned_cols=107 Identities=18% Similarity=0.257 Sum_probs=65.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC--CCHHHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDA 312 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~ 312 (497)
++..||.|+|||..|.++|..|.. .|+ + .+.++|.+-=..++-..+|.+. ..+......+ .+-.++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~-~~~~~~~~~v~~t~d~~a 70 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQT-CPIEGVDFKVRGTNDYKD 70 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTT-HHHHTCCCCEEEESCGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhh-hhhcCCCcEEEEcCCHHH
Confidence 345799999999999999988765 365 2 6999998621110000012211 1111111111 122467
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 313 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+++ +|++|=+.+.+ |- .-+++++.+.+++..-+|+-.|||.
T Consensus 71 ~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 71 LEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 777 89887554433 31 1257778888999888999999996
No 137
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.40 E-value=0.39 Score=48.27 Aligned_cols=107 Identities=19% Similarity=0.252 Sum_probs=67.0
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC--cccCCCccCCchhchhhhcccCCC--CCHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--LIVSSRLESLQHFKKPWAHEHEPV--KELV 310 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G--Li~~~r~~~l~~~k~~~a~~~~~~--~~L~ 310 (497)
.+..||.++|||..|.++|..+.. .|+ ..+.++|.+- -..++...++.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 345799999999999999998875 264 3799999861 1111111112221 2333211111 1224
Q ss_pred HHHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 311 DAVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+++++ .|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 66776 99887554433 21 2257888888999999999999996
No 138
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.39 E-value=1.1 Score=45.33 Aligned_cols=100 Identities=21% Similarity=0.189 Sum_probs=59.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhc--hhhhcc---cCC---CCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK--KPWAHE---HEP---VKE 308 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k--~~~a~~---~~~---~~~ 308 (497)
..||.|+|+|+-|.++|..|.+. | .+++++|++--.. +.+.... ..|... .+. ..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~----~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHV----DEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHH----HHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHH----HHHHHcCCCcccCCCCccCCCeEEECC
Confidence 45899999999999999998753 5 4678888751100 0011000 001000 011 257
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010939 309 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 356 (497)
Q Consensus 309 L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt~ 356 (497)
+.|+++. +|++| ++.+. -+.+++++.++.+. +..+|..++|-..
T Consensus 93 ~~ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 8888876 77776 33332 36778888877654 4567777888553
No 139
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=88.38 E-value=1.6 Score=38.55 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=56.0
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHh
Q 010939 237 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVN 314 (497)
Q Consensus 237 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~ 314 (497)
..+|+|.|| |-.|..+++.|.+ .| .+++.++++.- ....+...+..+.. +-....++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8888888877765 25 46888887521 10111011111111 1122246778887
Q ss_pred ccCCcEEEEccCCCCC---------CCHHHHHHHHccCCCceEEecC
Q 010939 315 AIKPTILIGTSGQGRT---------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~---------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
. +|++|=+.+.... .+..+++.|.+..-+.+||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 6 8999987765421 1456666666554445665433
No 140
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=88.25 E-value=0.66 Score=45.51 Aligned_cols=48 Identities=6% Similarity=0.197 Sum_probs=36.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|+..+++-.|.+ .+.+++++|||.+|.+++..|.. .|. ++|++++|.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666677666654 56799999999999999888765 365 679988875
No 141
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.24 E-value=0.52 Score=43.99 Aligned_cols=93 Identities=14% Similarity=0.188 Sum_probs=57.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~-vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
.||.|+|+|.-|..+|..|... |. ++++ +|++ .+.+....+.+- .....+..|+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988653 63 4554 5553 111222111111 0112345566765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010939 317 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 317 kptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
+|++| ++..+ ...+++++.++. .+..+|+.+|||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88877 34333 456777777765 45669999999873
No 142
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=88.20 E-value=3.5 Score=41.04 Aligned_cols=183 Identities=20% Similarity=0.220 Sum_probs=106.0
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~---------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~ 259 (497)
..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 3555555432 23344467777877652 1457899999999999999999998864
Q ss_pred HHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHH
Q 010939 260 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEV 335 (497)
Q Consensus 260 ~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteev 335 (497)
.|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 264 688888752 11 11 1 13578899987 89888552 2236788888
Q ss_pred HHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcE----EEecC-CCCCccccCCeeeCCCCccccccchhhhHHHH
Q 010939 336 VEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRA----IFASG-SPFDPFEYGDNVFVPGQANNAYIFPGLGLGLI 410 (497)
Q Consensus 336 i~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Gra----i~AsG-sPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i 410 (497)
++.|. +..++.=.|.-.---|..-.+|++ |+. +=..+ -|.++ +. .-=+..|..+-|=++-...
T Consensus 216 l~~mk---~ga~lin~srg~~vd~~aL~~aL~---g~i~ga~lDv~~~eP~~~---~~---~L~~~~nviltPh~~~~t~ 283 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARGALVDTEALVEALR---GHLFGAGLDVTDPEPLPP---GH---PLYALPNAVITPHIGSAGR 283 (311)
T ss_dssp HTTSC---TTCEEEECSCGGGBCHHHHHHHHT---TTSSEEEESSCSSSSCCT---TS---GGGGCTTEEECCSCTTCBH
T ss_pred HhhCC---CCcEEEECCCCCccCHHHHHHHHh---CcCCEEEEeeCCCCCCCC---CC---hhhhCCCEEECCcCCCCCH
Confidence 88774 677888888743222222233433 331 11111 12111 00 1114568888887653221
Q ss_pred HcCCcccCHHHHHHHHHHHhccCC
Q 010939 411 MSGAIRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 411 ~~~a~~itd~m~~aAA~aLA~~v~ 434 (497)
.+ ...|...+++.|.+...
T Consensus 284 ~~-----~~~~~~~~~~nl~~~~~ 302 (311)
T 2cuk_A 284 TT-----RERMAEVAVENLLAVLE 302 (311)
T ss_dssp HH-----HHHHHHHHHHHHHHHHT
T ss_pred HH-----HHHHHHHHHHHHHHHHc
Confidence 11 24566666666666553
No 143
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=88.04 E-value=1.9 Score=44.23 Aligned_cols=189 Identities=14% Similarity=0.049 Sum_probs=107.4
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~---------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~ 259 (497)
..|.+.|--- +.+|=-+++-+|+..|- .+..|.+.++.|+|-|..|-.+|+.+..
T Consensus 119 ~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~- 197 (365)
T 4hy3_A 119 RGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG- 197 (365)
T ss_dssp SCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-
T ss_pred CCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-
Confidence 3455555322 33455677777777662 2356889999999999999999998743
Q ss_pred HHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEc----cCCCCCCCHHH
Q 010939 260 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGT----SGQGRTFTKEV 335 (497)
Q Consensus 260 ~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~----S~~~g~Fteev 335 (497)
.|+ +++.+|+.. .. + ......-...+|.|+++. .|+++=. ....++++++.
T Consensus 198 ----fG~-------~V~~~d~~~----~~-~-------~~~~~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~ 252 (365)
T 4hy3_A 198 ----FRA-------RIRVFDPWL----PR-S-------MLEENGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEA 252 (365)
T ss_dssp ----SCC-------EEEEECSSS----CH-H-------HHHHTTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHH
T ss_pred ----CCC-------EEEEECCCC----CH-H-------HHhhcCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHH
Confidence 264 677777641 10 0 011111112589999987 9999832 23346899999
Q ss_pred HHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeeeC----CCCccccccchhhhHHHHH
Q 010939 336 VEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFV----PGQANNAYIFPGLGLGLIM 411 (497)
Q Consensus 336 i~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~~~----p~Q~NN~~iFPGiglG~i~ 411 (497)
++.|. +.-++.=.|.-..--|-.-.+|+ ..|+.- | |. +|. ...... --+..|..+-|=+|-....
T Consensus 253 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~-a-aL---DV~-~~EPl~~~~pL~~~~nvilTPHia~~t~e 321 (365)
T 4hy3_A 253 FSSMR---RGAAFILLSRADVVDFDALMAAV--SSGHIV-A-AS---DVY-PEEPLPLDHPVRSLKGFIRSAHRAGALDS 321 (365)
T ss_dssp HHTSC---TTCEEEECSCGGGSCHHHHHHHH--HTTSSE-E-EE---SCC-SSSSCCTTCGGGTCTTEEECCSCSSCCHH
T ss_pred HhcCC---CCcEEEECcCCchhCHHHHHHHH--HcCCce-E-Ee---eCC-CCCCCCCCChhhcCCCEEECCccccCHHH
Confidence 99995 67788877764422222223333 356543 3 21 111 001100 1245678888876543222
Q ss_pred cCCcccCHHHHHHHHHHHhccCC
Q 010939 412 SGAIRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 412 ~~a~~itd~m~~aAA~aLA~~v~ 434 (497)
-...|...+++.|.....
T Consensus 322 -----~~~~~~~~~~~ni~~~~~ 339 (365)
T 4hy3_A 322 -----AFKKMGDMVLEDMDLMDR 339 (365)
T ss_dssp -----HHHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHHHHc
Confidence 224555666666666554
No 144
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=88.01 E-value=0.75 Score=47.29 Aligned_cols=96 Identities=23% Similarity=0.341 Sum_probs=54.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-----------ccCCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-----------EHEPV 306 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-----------~~~~~ 306 (497)
.||+|+|||-.|..+++.|.+ .|- .-.++.++|++ ..+ +......+.. +....
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999999777777666643 231 00478888875 111 1111112211 11122
Q ss_pred CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 307 KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 307 ~~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
.++.++++..++|++|=+++. .+..+++++..+... .+| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g~-~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTGV-PYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHTC-CEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhCC-CEE-EecC
Confidence 468888988899999977653 245667766555443 343 2544
No 145
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.99 E-value=1 Score=42.45 Aligned_cols=98 Identities=15% Similarity=0.276 Sum_probs=59.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 317 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 317 (497)
.||.|+|+|.-|..+|..|... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988763 631 12478888874 1 1121111111 11123678899987
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010939 318 PTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 356 (497)
Q Consensus 318 ptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt~ 356 (497)
+|++| ++..+ --.+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88887 44433 45678888877653 4557777777663
No 146
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=87.96 E-value=5.2 Score=39.66 Aligned_cols=117 Identities=16% Similarity=0.183 Sum_probs=79.2
Q ss_pred CCCCceec-Cccc--hhHHHHHHHHHHHHHh-----------------CCCCCCceEEEeCcChHHHHHHHHHHHHHHHh
Q 010939 204 TTHLVFND-DIQG--TASVVLAGLISAMKFL-----------------GGSLADQRFLFLGAGEAGTGIAELIALEISKQ 263 (497)
Q Consensus 204 ~~~~~FnD-DiQG--Ta~V~lAgll~Al~~~-----------------g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~ 263 (497)
..+++.|- +... +|=-+++.+|+..|-. ...|.+.++.|+|.|..|..+|+.+..
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~----- 145 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA----- 145 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH-----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH-----
Confidence 46777763 3322 3334788888877631 236899999999999999999998864
Q ss_pred cCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHH
Q 010939 264 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAM 339 (497)
Q Consensus 264 ~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~M 339 (497)
.|+ +++.+|+..- + . ......+|.|+++. .|+++=.- ...++++++.++.|
T Consensus 146 ~G~-------~V~~~dr~~~------~---~-------~~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 146 LGA-------QVRGFSRTPK------E---G-------PWRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp TTC-------EEEEECSSCC------C---S-------SSCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CCC-------EEEEECCCcc------c---c-------CcccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 264 5888887532 0 0 01123578888886 89887542 22457888888887
Q ss_pred HccCCCceEEecCC
Q 010939 340 ASLNEKPIIFSLSN 353 (497)
Q Consensus 340 a~~~~rPIIFaLSN 353 (497)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 4 6678887776
No 147
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.94 E-value=0.51 Score=46.99 Aligned_cols=98 Identities=18% Similarity=0.355 Sum_probs=62.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc----CCchhchhhhcccCCC---CCHHH
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELVD 311 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~----~l~~~k~~~a~~~~~~---~~L~e 311 (497)
||.|+|||+.|.++|-.++.. |+ ..++++|.+ .++.+ ++.+.. .+......+ .+. +
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~~i~~t~d~-~ 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAA-AELGVDIRISGSNSY-E 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHH-HHHTCCCCEEEESCG-G
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhh-hhcCCCeEEEECCCH-H
Confidence 689999999999999777643 54 369999986 22211 121111 111111111 455 6
Q ss_pred HHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 312 AVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 312 ~v~~vkptvLIG~S~~~g~--------------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
++++ +|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 64 a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 64 DMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 7777 9999866554431 1357888888889888777789997
No 148
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=87.82 E-value=2.8 Score=41.55 Aligned_cols=176 Identities=13% Similarity=0.100 Sum_probs=106.0
Q ss_pred hhHHHHHHHHHHHHHh----------------CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 010939 216 TASVVLAGLISAMKFL----------------GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 279 (497)
Q Consensus 216 Ta~V~lAgll~Al~~~----------------g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD 279 (497)
+|=-+++-+|+..|-. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 3445666666666521 1468899999999999999999998754 64 688888
Q ss_pred cCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 280 SKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 280 ~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+.. .. ... ++ ...+|.|+++. .|+++=.- ...++++++.++.|. +..++.=.|.-.
T Consensus 153 r~~----~~---~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSS----VD---QNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSC----CC---TTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred ccc----cc---ccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 752 11 111 11 23589999987 88887432 224678899988885 677888777643
Q ss_pred CCCCCCHHHHhccccCcEEEecCCCC--CccccCCeeeCCCCccccccchhhhHHHHHcCCcccCHHHHHHHHHHHhccC
Q 010939 356 SQSECTAEEAYTWSQGRAIFASGSPF--DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQV 433 (497)
Q Consensus 356 ~~~E~~peda~~~t~Grai~AsGsPf--~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~m~~aAA~aLA~~v 433 (497)
.--|-.-.+|++ +|+.-.|.=--| .|. ..--+..|..+-|=++=| ....-.+.|...+++-|.+..
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhh
Confidence 222222223332 343322211011 111 112356688888876511 223445778888888887766
Q ss_pred Cc
Q 010939 434 TQ 435 (497)
Q Consensus 434 ~~ 435 (497)
.-
T Consensus 281 ~~ 282 (290)
T 3gvx_A 281 EG 282 (290)
T ss_dssp C-
T ss_pred cC
Confidence 43
No 149
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.75 E-value=0.39 Score=48.26 Aligned_cols=104 Identities=20% Similarity=0.276 Sum_probs=64.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC--CCHHHHHhcc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 316 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~v~~v 316 (497)
||.|+|||..|.++|..|+.. |+ ...+.++|.+-=..++...+|.+. ..+......+ .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988764 55 258999998631111100012211 1121111111 245677777
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 317 KPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 317 kptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+|++|=+.+.+ |- +-+++.+.+.++++.-+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 89887444333 21 1256778888999999999999996
No 150
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.51 E-value=1.1 Score=42.51 Aligned_cols=95 Identities=14% Similarity=0.135 Sum_probs=57.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhc---hhhhcccCCCCCHHHHHhc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK---KPWAHEHEPVKELVDAVNA 315 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k---~~~a~~~~~~~~L~e~v~~ 315 (497)
||.|+|+|.-|..+|..|... | .+++++|+.- .+.+.+.... ..+ .......+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeeecC-ccccCC
Confidence 799999999999999988753 5 3788888752 1111121110 000 00001123 467765
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 316 IKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 316 vkptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
+|++| ++..+. -.+++++.++.+. +..+|..++|..
T Consensus 64 --~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 88887 443332 3689999988653 466777789965
No 151
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.28 E-value=0.69 Score=46.69 Aligned_cols=116 Identities=15% Similarity=0.194 Sum_probs=69.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCC-CCCHHHHHhc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP-VKELVDAVNA 315 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~-~~~L~e~v~~ 315 (497)
..||.|+|||..|..+|..|... |+ ..++.++|.+-=..++-.-+|++. .+|....-. ..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 45899999999999999988763 55 258999997410000000013322 233211101 1222356766
Q ss_pred cCCcEEEEccCC---CCC-----C------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhcc
Q 010939 316 IKPTILIGTSGQ---GRT-----F------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW 368 (497)
Q Consensus 316 vkptvLIG~S~~---~g~-----F------teevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~ 368 (497)
+|++|=+.+. +|- | -+++++.+.+++..-+|+-.|||.. +..+-+++.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd---~~t~~~~k~ 135 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVD---ILTYATWKF 135 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHH---HHHHHHHHh
Confidence 8987744433 231 1 2577888889999999999999962 344444443
No 152
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.17 E-value=1.2 Score=41.19 Aligned_cols=79 Identities=16% Similarity=0.240 Sum_probs=49.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHH
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 312 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 312 (497)
..+...||.|+|+|.-|..+|..|... | .+++++|++ .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 346678999999999999999988653 5 368888764 11 1
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 313 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
++ ++|++| ++.. ....+++++.+++..+..+|.-+||+.
T Consensus 55 ~~--~aD~vi-~av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~ 93 (209)
T 2raf_A 55 TT--LGEIVI-MAVP-YPALAALAKQYATQLKGKIVVDITNPL 93 (209)
T ss_dssp SS--CCSEEE-ECSC-HHHHHHHHHHTHHHHTTSEEEECCCCB
T ss_pred hc--cCCEEE-EcCC-cHHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 22 266655 2222 224567777665443367888899955
No 153
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.04 E-value=1.3 Score=43.77 Aligned_cols=111 Identities=15% Similarity=0.186 Sum_probs=64.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCC-CccCCchhch--hhhcc---cCC---CC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS-RLESLQHFKK--PWAHE---HEP---VK 307 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~-r~~~l~~~k~--~~a~~---~~~---~~ 307 (497)
..||.|+|+|.-|..+|..|... |........+++++|+..-.... +.+.+..... .|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 46999999999999999999764 31000001468888876321100 0000110000 01000 001 25
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010939 308 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 356 (497)
Q Consensus 308 ~L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt~ 356 (497)
++.|+++. +|++| ++... -..+++++.+..+. +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 78888876 88777 44433 46789999887654 4678889999553
No 154
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=87.01 E-value=0.73 Score=45.72 Aligned_cols=103 Identities=20% Similarity=0.297 Sum_probs=64.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc--CCcccCCCccCCchhchhhhcccCCC----CCHHH
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWAHEHEPV----KELVD 311 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~--~GLi~~~r~~~l~~~k~~~a~~~~~~----~~L~e 311 (497)
||+|.|| |..|..++..|+. .|+ ...+.++|. +-=-.++-..++.+.. ++......+ .++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEEeCCcchHH
Confidence 8999999 9999998887753 254 256899997 3100000000122211 222100011 13778
Q ss_pred HHhccCCcEEEEccCCCC---C-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 312 AVNAIKPTILIGTSGQGR---T-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 312 ~v~~vkptvLIG~S~~~g---~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
++++ .|++|=+.+.+. - .++++++.|.+++ +.+|+--|||.
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 8887 999886666542 1 3568889999999 99999999996
No 155
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.97 E-value=0.38 Score=43.92 Aligned_cols=98 Identities=20% Similarity=0.182 Sum_probs=59.6
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 010939 239 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 316 (497)
Q Consensus 239 riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 316 (497)
||.|+| +|..|..++..|.+ .| .+++++|++- ++.+.+......+.. ..-...++.++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 64 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRRE----EKAEAKAAEYRRIAGDASITGMKNEDAAEA- 64 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESSH----HHHHHHHHHHHHHHSSCCEEEEEHHHHHHH-
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHHhccccccCCCChhhHHHHHhc-
Confidence 799999 99999999988864 25 3688888741 111111110000100 00012578888887
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010939 317 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 317 kptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
+|++|=+.. +. ..+++++.+.+..+..+|.-+||+.+
T Consensus 65 -~D~Vi~~~~-~~-~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 65 -CDIAVLTIP-WE-HAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp -CSEEEECSC-HH-HHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred -CCEEEEeCC-hh-hHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 899884433 32 35677777654435679999999764
No 156
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=86.67 E-value=4.1 Score=40.85 Aligned_cols=91 Identities=16% Similarity=0.224 Sum_probs=60.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHH
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 312 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 312 (497)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+..- . .....+- -...+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~~----~-----~~~~~~g---~~~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHRK----V-----NVEKELK---ARYMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSCC----H-----HHHHHHT---EEECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCcc----h-----hhhhhcC---ceecCHHHH
Confidence 68999999999999999999998753 263 6888887521 0 0001110 011378888
Q ss_pred HhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 313 VNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 313 v~~vkptvLIG~S~----~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
++. +|+++=.-. ..++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 887 898874321 13578888888884 45 7766664
No 157
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=86.54 E-value=0.35 Score=49.07 Aligned_cols=119 Identities=18% Similarity=0.237 Sum_probs=71.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc--CCCCCHHH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVD 311 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e 311 (497)
+....||.++|||..|.++|..|+.. |+ ...+.++|.+-=..++-.-+|.+. ..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888652 54 257999997511011100012221 1232111 0123443
Q ss_pred HHhccCCcEEEEccCC---CC-----CC------CHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccc
Q 010939 312 AVNAIKPTILIGTSGQ---GR-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS 369 (497)
Q Consensus 312 ~v~~vkptvLIG~S~~---~g-----~F------teevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t 369 (497)
++++ .|++|=+.+. +| +| -+++.+.|++++..-+|+-.|||.. +..+-+++.+
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd---i~t~~~~k~s 150 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVD---ILTYVAWKIS 150 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHH---HHHHHHHHHh
Confidence 5766 8988744333 33 12 2478888999999999999999962 4444455543
No 158
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.08 E-value=9.7 Score=39.42 Aligned_cols=189 Identities=16% Similarity=0.176 Sum_probs=109.4
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 262 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~ 262 (497)
..++++|--- +.+|=-++|.+|+..|- .+..|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 4677777543 34555688888888763 25679999999999999999999988643
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 010939 263 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 338 (497)
Q Consensus 263 ~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~ 338 (497)
|+ +++.+|+..- ..+. -++ ...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 168 --G~-------~V~~~d~~~~------~~~~-----~~~---~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 222 (404)
T 1sc6_A 168 --GM-------YVYFYDIENK------LPLG-----NAT---QVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEISL 222 (404)
T ss_dssp --TC-------EEEEECSSCC------CCCT-----TCE---ECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHHH
T ss_pred --CC-------EEEEEcCCch------hccC-----Cce---ecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHhh
Confidence 64 6888887421 0010 011 13578899887 88887431 1236889999988
Q ss_pred HHccCCCceEEecCCCCCCCCCCHHHHhccccCcEE------EecCCCCCccccCCeee-CCCCccccccchhhhHHHHH
Q 010939 339 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI------FASGSPFDPFEYGDNVF-VPGQANNAYIFPGLGLGLIM 411 (497)
Q Consensus 339 Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai------~AsGsPf~pv~~~G~~~-~p~Q~NN~~iFPGiglG~i~ 411 (497)
|. +.-++.=.|.=.---|-.-.+|+ ..|+.- |.. -|.++-+ ... .--+..|..+-|=+|-....
T Consensus 223 mk---~ga~lIN~aRg~~vd~~aL~~aL--~~g~i~gA~lDVf~~-EP~~~~~---~~~~pL~~~~nvilTPHi~~~T~e 293 (404)
T 1sc6_A 223 MK---PGSLLINASRGTVVDIPALADAL--ASKHLAGAAIDVFPT-EPATNSD---PFTSPLAEFDNVLLTPHIGGSTQE 293 (404)
T ss_dssp SC---TTEEEEECSCSSSBCHHHHHHHH--HTTSEEEEEEEC----------C---TTTGGGTTCTTEEEECCCSCCSHH
T ss_pred cC---CCeEEEECCCChHHhHHHHHHHH--HcCCccEEEEeecCC-CCCCccc---cccchhhcCCCEEECCCCCCCcHH
Confidence 85 56677777753311121112333 345432 221 2221000 000 01245689999977643322
Q ss_pred cCCcccCHHHHHHHHHHHhccCC
Q 010939 412 SGAIRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 412 ~~a~~itd~m~~aAA~aLA~~v~ 434 (497)
++ +.|...+++.|.+...
T Consensus 294 a~-----~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 294 AQ-----ENIGLEVAGKLIKYSD 311 (404)
T ss_dssp HH-----HHHHHHHHHHHHHHHH
T ss_pred HH-----HHHHHHHHHHHHHHHc
Confidence 22 3455566666666554
No 159
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.89 E-value=2 Score=45.66 Aligned_cols=98 Identities=13% Similarity=0.188 Sum_probs=57.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhch-hhh-cccCCCCCHHHHHhc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-~~a-~~~~~~~~L~e~v~~ 315 (497)
.+|.|+|+|.-|.++|..|... |. +++++|+.- .+ +..... ... ..-....++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ----SK---VDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS----HH---HHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHcccccCCCeEEeCCHHHHHhc
Confidence 3899999999999999998763 64 578888641 11 111110 000 001123567777765
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 316 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 316 v-kptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
. +||++| ++-+.+...+++++.+..+. +.-||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 377666 44444445677777776553 345777777743
No 160
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=85.86 E-value=0.37 Score=48.97 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=73.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc--CCCCCHHHHHh
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVN 314 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e~v~ 314 (497)
..||.++|||..|.++|..+... |+ ...+.++|.+-=..++-..+|.+. ..|.... ...+++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 46999999999999999988764 65 247999997411011100012221 1232211 01134544 66
Q ss_pred ccCCcEEEEc---cCCCC-----C------CCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccC---cEEEec
Q 010939 315 AIKPTILIGT---SGQGR-----T------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG---RAIFAS 377 (497)
Q Consensus 315 ~vkptvLIG~---S~~~g-----~------Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~G---rai~As 377 (497)
+ +|++|=+ ...+| + .-+++++.+.++++.-+|+-.|||. .....-+++.+ | +-+|.+
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv---di~t~~~~k~s-g~p~~rViG~ 162 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG---TDKNKQDWKLS-GLPMHRIIGS 162 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHH-CCCGGGEECC
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc---HHHHHHHHHHh-CCCHHHeecc
Confidence 6 9998833 33333 1 2246778888999999999999995 34455555554 2 235555
Q ss_pred C
Q 010939 378 G 378 (497)
Q Consensus 378 G 378 (497)
|
T Consensus 163 g 163 (330)
T 3ldh_A 163 G 163 (330)
T ss_dssp T
T ss_pred c
Confidence 4
No 161
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=85.79 E-value=1.9 Score=43.47 Aligned_cols=176 Identities=18% Similarity=0.162 Sum_probs=105.2
Q ss_pred hhHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 010939 216 TASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 279 (497)
Q Consensus 216 Ta~V~lAgll~Al~~----------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD 279 (497)
+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 344567777777662 35689999999999999999999998643 64 688888
Q ss_pred cCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 280 SKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 280 ~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+.. +. ... +. ......+|.|+++. .|+++=.- ...++|+++.++.|. +..++.=.|.-.
T Consensus 171 r~~---~~----~~~----~~-~~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk---~gailIN~aRG~ 233 (324)
T 3hg7_A 171 RSG---RE----RAG----FD-QVYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK---PGAILFNVGRGN 233 (324)
T ss_dssp SSC---CC----CTT----CS-EEECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC---TTCEEEECSCGG
T ss_pred CCh---HH----hhh----hh-cccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC---CCcEEEECCCch
Confidence 764 11 111 11 01123679999987 89888431 224678888888884 677888777643
Q ss_pred CCCCCCHHHHhccccCcEEEe-----cCCCCCccccCCeeeCCCCccccccchhhhHHHHHcCCcccCHHHHHHHHHHHh
Q 010939 356 SQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALA 430 (497)
Q Consensus 356 ~~~E~~peda~~~t~Grai~A-----sGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~m~~aAA~aLA 430 (497)
.--|-.-.+|+ .+|+.-.| ..-|.|+- ..--+..|..+-|=++-. + ....|...+++-|.
T Consensus 234 ~vde~aL~~aL--~~g~i~ga~lDV~~~EPl~~~------~pL~~~~nvilTPHia~~------t-~~~~~~~~~~~nl~ 298 (324)
T 3hg7_A 234 AINEGDLLTAL--RTGKLGMAVLDVFEQEPLPAD------SPLWGQPNLIITPHNSAY------S-FPDDVAQIFVRNYI 298 (324)
T ss_dssp GBCHHHHHHHH--HTTSSSEEEESCCSSSSCCTT------CTTTTCTTEEECCSCSSC------C-CHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHH--HcCCceEEEeccCCCCCCCCC------ChhhcCCCEEEeCCCccc------c-HHHHHHHHHHHHHH
Confidence 22222223333 23442111 11122110 001245688888876532 2 23567777777777
Q ss_pred ccCCc
Q 010939 431 GQVTQ 435 (497)
Q Consensus 431 ~~v~~ 435 (497)
....-
T Consensus 299 ~~~~G 303 (324)
T 3hg7_A 299 RFIDG 303 (324)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 76643
No 162
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=85.76 E-value=0.95 Score=45.17 Aligned_cols=105 Identities=21% Similarity=0.259 Sum_probs=65.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC--CCHHHHHhc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~~L~e~v~~ 315 (497)
.||.|+|||.-|..+|-+|... |+ ...+.|+|.+-=..++-.-+|++- .++....... .+-.+++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~ 69 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC
Confidence 3899999999999999888653 55 257999997521111111123321 1222111111 222355666
Q ss_pred cCCcEEEEccCCCCC--CC------------HHHHHHHHccCCCceEEecCCCC
Q 010939 316 IKPTILIGTSGQGRT--FT------------KEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 316 vkptvLIG~S~~~g~--Ft------------eevi~~Ma~~~~rPIIFaLSNPt 355 (497)
.|++|=+.+.+.- -| +++++.+++++.+-||.-.|||.
T Consensus 70 --aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp --CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred --CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 8999866665422 22 46788888999999999999996
No 163
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=85.76 E-value=7.3 Score=39.52 Aligned_cols=121 Identities=12% Similarity=0.193 Sum_probs=82.1
Q ss_pred CCCCceecCcc---chhHHHHHHHHHHHHH----------h----------CCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDIQ---GTASVVLAGLISAMKF----------L----------GGSLADQRFLFLGAGEAGTGIAELIALEI 260 (497)
Q Consensus 204 ~~~~~FnDDiQ---GTa~V~lAgll~Al~~----------~----------g~~l~d~riv~~GAGsAg~Gia~ll~~~~ 260 (497)
..|++.|---- .+|=-+++-+|+..|- . +..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 36777775332 3455668888877751 2 3468899999999999999999988643
Q ss_pred HHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHH
Q 010939 261 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVV 336 (497)
Q Consensus 261 ~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteevi 336 (497)
|+ +++.+|+.. . .... ... ...+|.|+++. .|+++=.-- ..++|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 688888852 1 1010 111 12389999987 999885422 2478999999
Q ss_pred HHHHccCCCceEEecCCCC
Q 010939 337 EAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 337 ~~Ma~~~~rPIIFaLSNPt 355 (497)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9995 677888777644
No 164
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=85.33 E-value=0.65 Score=45.96 Aligned_cols=111 Identities=17% Similarity=0.176 Sum_probs=65.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc--cCCCccCCchhchhhhcccCCCCCHHHHHh
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI--VSSRLESLQHFKKPWAHEHEPVKELVDAVN 314 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi--~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~ 314 (497)
.||+|.|| |..|..++..|+. .|.-...-..+++++|...-- ..+...++.+...+|..+-....++.++++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~ 79 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFK 79 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhC
Confidence 48999997 9999999888754 253100001379999975200 000000121111122222111256888998
Q ss_pred ccCCcEEEEccCCCCC--------------CCHHHHHHHHccC-CCceEEecCCCC
Q 010939 315 AIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~--------------Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
+ +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 80 ~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 80 D--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred C--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 6 9999977665532 3456788888876 666788899996
No 165
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=85.26 E-value=2 Score=44.81 Aligned_cols=71 Identities=25% Similarity=0.346 Sum_probs=48.4
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhc
Q 010939 237 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 315 (497)
Q Consensus 237 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 315 (497)
--|++|+|+ |-+|.|-++.+... |.. ..++..+|.+ .+ .+.. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~--~~-~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIK--ET-SRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHH--HH-TTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeecc--cc-ccCC-------ch-----------hhHhh
Confidence 458999999 99999999888653 641 1156777765 11 1100 01 23444
Q ss_pred cCCcEEEEccCC----CCCCCHHHHHHH
Q 010939 316 IKPTILIGTSGQ----GRTFTKEVVEAM 339 (497)
Q Consensus 316 vkptvLIG~S~~----~g~Fteevi~~M 339 (497)
.|++||+--. |.++|+|+++.|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 8999998654 578999999998
No 166
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=85.18 E-value=1.6 Score=43.09 Aligned_cols=101 Identities=11% Similarity=0.141 Sum_probs=59.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccC-CCCCHHHHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE-PVKELVDAV 313 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~-~~~~L~e~v 313 (497)
++..||.|+|+|.-|..+|..|... |.. ...+++++|+. ..+ +.+. .+.+..- ...+..|++
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~----~l~~~G~~~~~~~~e~~ 82 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVS----ALRKMGVKLTPHNKETV 82 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHH----HHHHHTCEEESCHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHH----HHHHcCCEEeCChHHHh
Confidence 3345899999999999999988653 631 11468888864 110 0011 1111111 124677777
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010939 314 NAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 356 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt~ 356 (497)
+. +|++| ++..+ -..+++++.+.... +..+|.-+||..+
T Consensus 83 ~~--aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 83 QH--SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp HH--CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred cc--CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 76 77766 33333 36677887776543 4567788888764
No 167
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=85.18 E-value=6.7 Score=39.55 Aligned_cols=97 Identities=14% Similarity=0.069 Sum_probs=63.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHH
Q 010939 232 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 311 (497)
Q Consensus 232 g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 311 (497)
+..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- . ....+ .+ ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHh-hc--CcEEeCCHHH
Confidence 5679999999999999999999988622 364 6888887521 1 11110 00 0011247888
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCceEEecCCC
Q 010939 312 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSNP 354 (497)
Q Consensus 312 ~v~~vkptvLIG~S~----~~g~Fteevi~~Ma~~~~rPIIFaLSNP 354 (497)
+++. .|+++=.-- ..++++++.++.|. +..++.-.|.-
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCG
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8887 898884421 23688888888884 56677666653
No 168
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=84.90 E-value=0.82 Score=48.20 Aligned_cols=99 Identities=13% Similarity=0.155 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHc-CCCCce--ecCccchhHHHHHHHHHHHHHhC--------CCCC
Q 010939 168 LHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYG-TTHLVF--NDDIQGTASVVLAGLISAMKFLG--------GSLA 236 (497)
Q Consensus 168 vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr-~~~~~F--nDDiQGTa~V~lAgll~Al~~~g--------~~l~ 236 (497)
+..+++.+...+ ++ |.++-+....-.++-++|. ..+|++ |+..-+.+.....-|+..++... ..-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 555566666667 43 5555444445567888886 467754 66666777666666766543321 1123
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..+|+|+|||.||+..|..+.. .|+ ++.++|++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5689999999999999988764 363 57777753
No 169
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=84.64 E-value=5.2 Score=39.27 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..||.|+|+|.-|.++|..|... |. ++++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 35899999999999999999764 63 478888884
No 170
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.60 E-value=0.77 Score=46.55 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=33.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 57788999999999999999999876 86 899999976
No 171
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=84.38 E-value=0.92 Score=43.73 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|.-|..+|..|... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999998753 6 367788874
No 172
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=84.29 E-value=1.3 Score=45.94 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=65.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCC--CC-CHH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP--VK-ELV 310 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~--~~-~L~ 310 (497)
+++++||+|+|.|.+|+++|++|.+ .| .++...|.+-.- .++....+.+..-. .+ .-.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~-------~~~~~~~L~~~gi~~~~g~~~~ 66 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFD-------ENPTAQSLLEEGIKVVCGSHPL 66 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGG-------GCHHHHHHHHTTCEEEESCCCG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCccc-------CChHHHHHHhCCCEEEECCChH
Confidence 4778999999999999999888865 37 478889985210 01111122111000 00 000
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCee
Q 010939 311 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNV 390 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~ 390 (497)
+.+.. .+|.+|=-++.+ -=++++.++.. ..-||+= | +|-++...+++.|--||| +|||
T Consensus 67 ~~~~~-~~d~vv~spgi~-~~~p~~~~a~~--~gi~v~~---------~--~e~~~~~~~~~~IaVTGT-------nGKT 124 (451)
T 3lk7_A 67 ELLDE-DFCYMIKNPGIP-YNNPMVKKALE--KQIPVLT---------E--VELAYLVSESQLIGITGS-------NGKT 124 (451)
T ss_dssp GGGGS-CEEEEEECTTSC-TTSHHHHHHHH--TTCCEEC---------H--HHHHHHHCCSEEEEEECS-------SCHH
T ss_pred HhhcC-CCCEEEECCcCC-CCChhHHHHHH--CCCcEEe---------H--HHHHHHhcCCCEEEEECC-------CCHH
Confidence 11110 167777444544 34666666554 3456551 1 334555566788888996 5666
Q ss_pred eC
Q 010939 391 FV 392 (497)
Q Consensus 391 ~~ 392 (497)
-.
T Consensus 125 TT 126 (451)
T 3lk7_A 125 TT 126 (451)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 173
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=84.26 E-value=1.5 Score=42.05 Aligned_cols=97 Identities=15% Similarity=0.127 Sum_probs=57.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
-.||.|+|+|.-|..+|..|... |. ..+++++|++. +.+...+..-.. .....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 35899999999999999988653 42 14688888741 111111100000 0012456666765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc--CCCceEEecCCCC
Q 010939 317 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNPT 355 (497)
Q Consensus 317 kptvLIG~S~~~g~Fteevi~~Ma~~--~~rPIIFaLSNPt 355 (497)
+|++| ++..+... +++++.+..+ .+..||.-+||-.
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCc
Confidence 88777 44444333 7888888765 3556777677643
No 174
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=84.19 E-value=1.1 Score=46.63 Aligned_cols=21 Identities=33% Similarity=0.588 Sum_probs=19.8
Q ss_pred eEEEeCcChHHHHHHHHHHHH
Q 010939 239 RFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~ 259 (497)
||.|+|||+=|+++|..|.+.
T Consensus 36 KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHc
Confidence 999999999999999999875
No 175
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=84.13 E-value=2.4 Score=44.53 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=61.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 315 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 315 (497)
..||.|+|+|.-|..+|..|.. .|. +++++|+.- +.+...+..+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~-----~G~-------~V~v~dr~~-------~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES-----RGY-------TVAIYNRTT-------SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSH-------HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHh-----CCC-------EEEEEcCCH-------HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 4689999999999999998865 363 577787641 111111111100 01123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 316 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 316 v-kptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
. ++|++| ++...+...+++++.+.... +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478777 45444445677888776554 456777888864
No 176
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=84.08 E-value=1.8 Score=45.62 Aligned_cols=100 Identities=17% Similarity=0.217 Sum_probs=59.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh-ch-hhhcccCCCCCHHHHHhcc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KK-PWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~-k~-~~a~~~~~~~~L~e~v~~v 316 (497)
||.|+|+|.-|..+|..|.. .|. +++++|+..= +.+.+... .. +.........++.|+++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~~----~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l 66 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAE-----KGF-------KVAVFNRTYS----KSEEFMKANASAPFAGNLKAFETMEAFAASL 66 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSHH----HHHHHHHHTTTSTTGGGEEECSCHHHHHHHB
T ss_pred EEEEEChHHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----HHHHHHHhcCCCCCCCCeEEECCHHHHHhcc
Confidence 79999999999999998865 363 5888887411 10001100 00 0000011235788888743
Q ss_pred -CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 317 -KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 317 -kptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
++|++| ++...+...+++++.+..+. +.-||.-+||-.
T Consensus 67 ~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 67 KKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp CSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred cCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 488877 44444445677887776543 456778888864
No 177
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=84.06 E-value=0.98 Score=39.27 Aligned_cols=34 Identities=6% Similarity=0.137 Sum_probs=27.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+.+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 35689999999999999998865 25 468889885
No 178
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.03 E-value=1.2 Score=47.18 Aligned_cols=163 Identities=15% Similarity=0.135 Sum_probs=84.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC-------------cccCCCccCCchhc--------
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG-------------LIVSSRLESLQHFK-------- 296 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G-------------Li~~~r~~~l~~~k-------- 296 (497)
.||.|+|+|.-|.|||..+..+ |. +++++|++- ++.+++ ++..+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~~e~a~~~i~~~l~~~~~~G~---l~~~~~~~~~~~i 119 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRNEQRCKQELEVMYAREKSFKR---LNDKRIEKINANL 119 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCHHHHHHHHHHHHHHHHHTTS---CCHHHHHHHHTTE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECcHHHHHHHHHHHHHHHHHcCC---CCHHHHHHHhcce
Confidence 5899999999999999988763 64 678888641 111111 11100
Q ss_pred ------hhhhcc-----c-CCC----CC-HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCc---eEEecCCCCC
Q 010939 297 ------KPWAHE-----H-EPV----KE-LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKP---IIFSLSNPTS 356 (497)
Q Consensus 297 ------~~~a~~-----~-~~~----~~-L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rP---IIFaLSNPt~ 356 (497)
...+.- . ++. .. +.++-+.++|+.+|...+.. ++ +..|++..++| |-+=.=||.+
T Consensus 120 ~~t~dl~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs--l~---i~~ia~~~~~p~r~iG~HffnPv~ 194 (460)
T 3k6j_A 120 KITSDFHKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSS--LD---LNEISSVLRDPSNLVGIHFFNPAN 194 (460)
T ss_dssp EEESCGGGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SC---HHHHHTTSSSGGGEEEEECCSSTT
T ss_pred EEeCCHHHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC--hh---HHHHHHhccCCcceEEEEecchhh
Confidence 011100 0 000 01 23333456777777543322 33 34566666666 3344455763
Q ss_pred CC--------CCCHHHHhccccCcEEE-ecCCCCCccccCCeeeCCCCccccccchhhhHHHHHcCCcccCHHHHHHHHH
Q 010939 357 QS--------ECTAEEAYTWSQGRAIF-ASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAE 427 (497)
Q Consensus 357 ~~--------E~~peda~~~t~Grai~-AsGsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~m~~aAA~ 427 (497)
.. +-|.+++++.. +.++ +-| -.||..+ ..||+.-|-+.+|.+.=++.+....-++.+.+..|.+
T Consensus 195 ~m~LvEIv~g~~Ts~e~~~~~--~~l~~~lG--k~~v~v~---d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 195 VIRLVEIIYGSHTSSQAIATA--FQACESIK--KLPVLVG---NCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp TCCEEEEECCSSCCHHHHHHH--HHHHHHTT--CEEEEES---SCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred hCCEEEEEeCCCCCHHHHHHH--HHHHHHhC--CEEEEEe---cccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 21 12223333321 1111 122 1344443 3688888888999888777777333367766666643
No 179
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=84.01 E-value=3.9 Score=42.37 Aligned_cols=191 Identities=13% Similarity=0.050 Sum_probs=107.7
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 260 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~--------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~ 260 (497)
..|.+.|--- +.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 135 ~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~- 213 (393)
T 2nac_A 135 RNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPF- 213 (393)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred CCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhC-
Confidence 5677777322 34455578888888762 25679999999999999999999988542
Q ss_pred HHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc-c-CCCCCHHHHHhccCCcEEEEcc----CCCCCCCHH
Q 010939 261 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-H-EPVKELVDAVNAIKPTILIGTS----GQGRTFTKE 334 (497)
Q Consensus 261 ~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~-~~~~~L~e~v~~vkptvLIG~S----~~~g~Ftee 334 (497)
|+ +++.+|+... . . ..++. . ....+|.|+++. .|+++=.- ...++|+++
T Consensus 214 ----G~-------~V~~~d~~~~----~---~-----~~~~~~G~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~ 268 (393)
T 2nac_A 214 ----DV-------HLHYTDRHRL----P---E-----SVEKELNLTWHATREDMYPV--CDVVTLNCPLHPETEHMINDE 268 (393)
T ss_dssp ----TC-------EEEEECSSCC----C---H-----HHHHHHTCEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSHH
T ss_pred ----CC-------EEEEEcCCcc----c---h-----hhHhhcCceecCCHHHHHhc--CCEEEEecCCchHHHHHhhHH
Confidence 63 5787876411 0 0 11111 0 112578898887 89888542 224688999
Q ss_pred HHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCC--ccccCCeeeCCCCccccccchhhhHHHHHc
Q 010939 335 VVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFD--PFEYGDNVFVPGQANNAYIFPGLGLGLIMS 412 (497)
Q Consensus 335 vi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~--pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~ 412 (497)
.++.|. +.-++.=.|.-.---|-.-.+|+ .+|+.--|.--=|. |..- ... --+..|..+-|=++-....+
T Consensus 269 ~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA~lDV~~~EP~~~-~~p--L~~~~nvilTPHia~~T~e~ 340 (393)
T 2nac_A 269 TLKLFK---RGAYIVNTARGKLCDRDAVARAL--ESGRLAGYAGDVWFPQPAPK-DHP--WRTMPYNGMTPHISGTTLTA 340 (393)
T ss_dssp HHTTSC---TTEEEEECSCGGGBCHHHHHHHH--HTTSEEEEEESCCSSSSCCT-TCG--GGTSTTBCCCCSCTTCSHHH
T ss_pred HHhhCC---CCCEEEECCCchHhhHHHHHHHH--HcCCeeEEEEEecCCCCCCC-CCh--hHcCCCEEECCCCCcCcHHH
Confidence 988885 56788777763211221222333 34553322111111 1100 000 11456888888776432222
Q ss_pred CCcccCHHHHHHHHHHHhccC
Q 010939 413 GAIRVHDDMLLAAAEALAGQV 433 (497)
Q Consensus 413 ~a~~itd~m~~aAA~aLA~~v 433 (497)
...|...+++-|....
T Consensus 341 -----~~~~~~~~~~nl~~~~ 356 (393)
T 2nac_A 341 -----QARYAAGTREILECFF 356 (393)
T ss_dssp -----HHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHH
Confidence 1334455555555554
No 180
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.00 E-value=1.1 Score=43.62 Aligned_cols=32 Identities=31% Similarity=0.523 Sum_probs=27.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|.-|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 63 68899875
No 181
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=83.99 E-value=0.86 Score=44.94 Aligned_cols=98 Identities=18% Similarity=0.239 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc
Q 010939 222 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 301 (497)
Q Consensus 222 Agll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 301 (497)
.|++.+++-.| +.|++|+|||.+|.+++..|.+. | .++++++|. .++.+.+. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 35666665433 78999999999999998888653 5 579988885 33322121 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC----CCCCHHHHH-HHHccCCCceEEecC
Q 010939 302 EHEPVKELVDAVNAIKPTILIGTSGQG----RTFTKEVVE-AMASLNEKPIIFSLS 352 (497)
Q Consensus 302 ~~~~~~~L~e~v~~vkptvLIG~S~~~----g~Fteevi~-~Ma~~~~rPIIFaLS 352 (497)
......+|. ++|++|-++..+ -.+.++.+. .+. +..+|+=++
T Consensus 163 ~~~~~~~l~------~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~v 209 (269)
T 3phh_A 163 DCFMEPPKS------AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLA 209 (269)
T ss_dssp EEESSCCSS------CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESC
T ss_pred eEecHHHhc------cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeC
Confidence 111122221 699999765543 146666554 343 455666553
No 182
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=83.91 E-value=5.8 Score=39.94 Aligned_cols=128 Identities=15% Similarity=0.136 Sum_probs=83.2
Q ss_pred chhHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 010939 215 GTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 275 (497)
Q Consensus 215 GTa~V~lAgll~Al~~-------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i 275 (497)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+... |+ ++
T Consensus 100 ~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V 167 (334)
T 2pi1_A 100 SVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KV 167 (334)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC-----cC-------EE
Confidence 3455677777777652 35679999999999999999999998643 64 68
Q ss_pred EEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCceEEec
Q 010939 276 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSL 351 (497)
Q Consensus 276 ~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~Ma~~~~rPIIFaL 351 (497)
+.+|+..- . . .........+|.|+++. .|+++=.- ...++|+++.++.|. +.-|+.=.
T Consensus 168 ~~~d~~~~------~-~------~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~ 229 (334)
T 2pi1_A 168 LCYDVVKR------E-D------LKEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINT 229 (334)
T ss_dssp EEECSSCC------H-H------HHHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEEC
T ss_pred EEECCCcc------h-h------hHhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC---CCcEEEEC
Confidence 88887521 0 0 00111112459999987 99888431 234689999999995 67788777
Q ss_pred CCCCCCCCCCHHHHhccccCcEE
Q 010939 352 SNPTSQSECTAEEAYTWSQGRAI 374 (497)
Q Consensus 352 SNPt~~~E~~peda~~~t~Grai 374 (497)
|.-..--|-.-.+|+ ..|+.-
T Consensus 230 aRg~~vd~~aL~~aL--~~g~i~ 250 (334)
T 2pi1_A 230 ARGKVVDTDALYRAY--QRGKFS 250 (334)
T ss_dssp SCGGGBCHHHHHHHH--HTTCEE
T ss_pred CCCcccCHHHHHHHH--HhCCce
Confidence 764422333333443 346544
No 183
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=83.86 E-value=0.74 Score=48.39 Aligned_cols=37 Identities=27% Similarity=0.497 Sum_probs=32.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 45788999999999999999999875 86 799999976
No 184
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=83.72 E-value=1.1 Score=43.86 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=28.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.+-.||.|+|+|.-|.++|..|... |. +++++|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34456999999999999999999763 63 68888875
No 185
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=83.71 E-value=2.6 Score=42.27 Aligned_cols=187 Identities=12% Similarity=0.104 Sum_probs=110.9
Q ss_pred CCCCceecC----ccchhHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHh
Q 010939 204 TTHLVFNDD----IQGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 263 (497)
Q Consensus 204 ~~~~~FnDD----iQGTa~V~lAgll~Al~~----------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~ 263 (497)
..+++.|-- -+.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 466666522 144556678888887763 2567999999999999999999998854
Q ss_pred cCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHH
Q 010939 264 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAM 339 (497)
Q Consensus 264 ~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~M 339 (497)
.|+ +++.+|+..- ...... .+ ....+|.|+++. .|+++=.- ...++|+++.++.|
T Consensus 161 ~G~-------~V~~~dr~~~-------~~~~~~-~~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 161 WGF-------PLRCWSRSRK-------SWPGVE-SY----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp TTC-------CEEEEESSCC-------CCTTCE-EE----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CCC-------EEEEEcCCch-------hhhhhh-hh----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 264 5787887521 111110 01 011578898886 89887431 12368999998888
Q ss_pred HccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEec-----CCCCCccccCCeeeCCCCccccccchhhhHHHHHcCC
Q 010939 340 ASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFAS-----GSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGA 414 (497)
Q Consensus 340 a~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~As-----GsPf~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a 414 (497)
. +..++.=.|.-..--|-.-.+|+ ..|+.--|. .-|.|+- . .--+..|..+-|=++- .
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL--~~g~i~gA~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~ 282 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAAL--DSGKLKGAMLDVFSQEPLPQE----S--PLWRHPRVAMTPHIAA------V 282 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCSSSSCCTT----C--GGGGCTTEEECSSCSS------C
T ss_pred C---CCCEEEECCCChhhhHHHHHHHH--HhCCccEEEcCCCCCCCCCCC----C--hhhcCCCEEECCCCCc------c
Confidence 5 67788777764422333333444 345543331 1121110 0 0124567888887652 2
Q ss_pred cccCHHHHHHHHHHHhccCC
Q 010939 415 IRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 415 ~~itd~m~~aAA~aLA~~v~ 434 (497)
+. ...|...+++.|.....
T Consensus 283 t~-~~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 283 TR-PAEAIDYISRTITQLEK 301 (315)
T ss_dssp CC-HHHHHHHHHHHHHHHHH
T ss_pred cH-HHHHHHHHHHHHHHHHc
Confidence 22 25677777777766654
No 186
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.61 E-value=1.5 Score=43.07 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=28.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+...||.|+|+|.-|.++|..|... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 45567999999999999999998763 63 57777764
No 187
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.59 E-value=0.7 Score=41.25 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=28.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
++.+.+|+|+|+|.-|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999988542 14 368888875
No 188
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.57 E-value=2 Score=39.46 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=55.8
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhch-hhhcccCCCCCHH
Q 010939 233 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAHEHEPVKELV 310 (497)
Q Consensus 233 ~~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-~~a~~~~~~~~L~ 310 (497)
.+|++.+|+|.|| |-.|..+++.|++ .| -++++++++. .+.+.+..... .+..-+-. .++.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~-~~~~ 79 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE-EDFS 79 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT-SCCG
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH-HHHH
Confidence 4588899999998 8888888888765 36 3788888752 11011111111 11111111 5566
Q ss_pred HHHhccCCcEEEEccCCCCC------------CCHHHHHHHHccCCCceEEecC
Q 010939 311 DAVNAIKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
++++. +|++|=+.+.... -+..+++.+.+..-+-|||.=|
T Consensus 80 ~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 80 HAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp GGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 77764 9999977665421 0345666666555455666444
No 189
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=83.54 E-value=1.3 Score=36.93 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=26.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999988864 25 468888874
No 190
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.46 E-value=1.1 Score=44.28 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=28.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+..||.|+|+|.-|.++|..|... |. +++++|+.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 3457999999999999999998753 63 57888864
No 191
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=83.42 E-value=1.3 Score=44.09 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..||||+|+|.||+..|..|... |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46999999999999999988653 32 1378899875
No 192
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.39 E-value=1.4 Score=44.28 Aligned_cols=110 Identities=10% Similarity=0.164 Sum_probs=61.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCC-CccCCchhch--hhhcc---cC---CCCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS-RLESLQHFKK--PWAHE---HE---PVKE 308 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~-r~~~l~~~k~--~~a~~---~~---~~~~ 308 (497)
.||.|+|+|.-|.++|..|..+ |.....-..+++++|+..-+... +.+.+..... .|-.. .. ...+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~-----G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN-----AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH-----HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 4899999999999999999765 31000000468888876321000 0000111000 00000 00 1246
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHc----c-CCCceEEecCCCCC
Q 010939 309 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMAS----L-NEKPIIFSLSNPTS 356 (497)
Q Consensus 309 L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~----~-~~rPIIFaLSNPt~ 356 (497)
+.|+++. +|++| ++... -..+++++.+.. + .+..+|..++|-..
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 8888876 88776 33322 467888888875 4 34568888998653
No 193
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.16 E-value=1.6 Score=41.93 Aligned_cols=91 Identities=14% Similarity=0.203 Sum_probs=57.4
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
.||.|+|+ |.-|..+|..|.. .| -+++++|++- +.+.. +....-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g-------~~V~~~~r~~-------~~~~~----~~~~g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SA-------HHLAAIEIAP-------EGRDR----LQGMGIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SS-------SEEEEECCSH-------HHHHH----HHHTTCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEEECCH-------HHHHH----HHhcCCCcCCHHHHhcC-
Confidence 48999999 9999999998865 36 3688888641 11111 11100111355667765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 317 KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 317 kptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
+|++| ++..+.. .+++++.+..+. +..+|.-+|+..
T Consensus 68 -aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 88888 4433333 688888887653 456777788854
No 194
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=83.07 E-value=4.7 Score=41.04 Aligned_cols=161 Identities=14% Similarity=0.089 Sum_probs=97.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc-cCCCCCHH
Q 010939 232 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELV 310 (497)
Q Consensus 232 g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~ 310 (497)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. .. + ..... .....+|.
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~--~~---~-------~~~~~g~~~~~~l~ 210 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAF-----GM-------NVLVWGREN--SK---E-------RARADGFAVAESKD 210 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSHH--HH---H-------HHHHTTCEECSSHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEECCCC--CH---H-------HHHhcCceEeCCHH
Confidence 4678999999999999999999988643 64 688888752 00 0 00000 01235899
Q ss_pred HHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEe-----cCCCC
Q 010939 311 DAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPF 381 (497)
Q Consensus 311 e~v~~vkptvLIG~S----~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~A-----sGsPf 381 (497)
|+++. .|+++=.- ...++++++.++.|. +..++.=.|+-..--|-.-.+|++ +|+.-.| ..-|.
T Consensus 211 ell~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl 283 (352)
T 3gg9_A 211 ALFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPI 283 (352)
T ss_dssp HHHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCC
T ss_pred HHHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCC
Confidence 99988 89888431 234689999999885 778888888754334444445554 3543211 11122
Q ss_pred CccccCCeeeCCCCccccccchhhhHHHHHcCCcccCHHHHHHHHHHHhccCC
Q 010939 382 DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 382 ~pv~~~G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~m~~aAA~aLA~~v~ 434 (497)
++ . ..-=+..|..+-|=+|-..- .-.+.|...+++-|.....
T Consensus 284 ~~----~--~pL~~~~nvilTPHia~~t~-----e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 284 LQ----G--HTLLRMENCICTPHIGYVER-----ESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp CS----C--CGGGGCTTEEECCSCTTCBH-----HHHHHHHHHHHHHHHHHHT
T ss_pred CC----C--ChhhcCCCEEECCCCCCCCH-----HHHHHHHHHHHHHHHHHHc
Confidence 11 0 01124568888887743211 1224566667777766653
No 195
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=82.96 E-value=0.87 Score=46.38 Aligned_cols=107 Identities=15% Similarity=0.295 Sum_probs=65.0
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccC-CCCCHHHH
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE-PVKELVDA 312 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~-~~~~L~e~ 312 (497)
+...||.|+|| |..|..+|-.++. .|+. .++.++|.+-=..++..-+|.+. .|....- ...++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 45679999998 9999999966654 3652 46999997411001100013222 2211100 12578899
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCce-EEecCCCC
Q 010939 313 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPI-IFSLSNPT 355 (497)
Q Consensus 313 v~~vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPI-IFaLSNPt 355 (497)
+++ +|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 988 89988444332 21 23467778888898885 88899996
No 196
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=82.91 E-value=1.1 Score=43.38 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|.-|.++|..|... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998753 63 68888875
No 197
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=82.79 E-value=0.74 Score=39.71 Aligned_cols=32 Identities=16% Similarity=0.393 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|+|.-|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 479999999999999998865 36 468989885
No 198
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.56 E-value=1.2 Score=41.36 Aligned_cols=94 Identities=16% Similarity=0.196 Sum_probs=55.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHh
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 314 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~ 314 (497)
-...||.|+|+|..|..+|..+.. .|. +++++|++- ++ .. .+++..-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----~~---~~----~~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----KR---TA----RLFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----HH---HH----HHSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---HH----HHHHcCCceecHHHHHh
Confidence 345689999999999999998864 253 588888741 11 11 11111101126888887
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCC
Q 010939 315 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 356 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~ 356 (497)
. +|++|= +..+. ..+++++ ++...+.-+|.-+||+..
T Consensus 83 ~--~DvVi~-av~~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIFV-AVFRE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEEE-CSCGG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred C--CCEEEE-CCChH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 5 898883 33332 3445554 333335668888999863
No 199
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=82.36 E-value=1.1 Score=43.16 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|.-|.++|..|... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999999764 6 357888875
No 200
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=82.00 E-value=5.8 Score=40.02 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=79.7
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 262 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~ 262 (497)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 111 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~---- 186 (335)
T 2g76_A 111 KGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS---- 186 (335)
T ss_dssp HTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH----
Confidence 3566666432 23444577788877663 2567999999999999999999998853
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHH
Q 010939 263 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVE 337 (497)
Q Consensus 263 ~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~ 337 (497)
.|+ +++.+|+.. ++. .+.. .-...+|.|+++. .|+++=.- ...++|+++.++
T Consensus 187 -~G~-------~V~~~d~~~----------~~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 243 (335)
T 2g76_A 187 -FGM-------KTIGYDPII----------SPE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFA 243 (335)
T ss_dssp -TTC-------EEEEECSSS----------CHH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHT
T ss_pred -CCC-------EEEEECCCc----------chh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHh
Confidence 253 688888641 110 1111 0112478999987 89988542 123578888888
Q ss_pred HHHccCCCceEEecCCC
Q 010939 338 AMASLNEKPIIFSLSNP 354 (497)
Q Consensus 338 ~Ma~~~~rPIIFaLSNP 354 (497)
.|. +..++.=.|.-
T Consensus 244 ~mk---~gailIN~arg 257 (335)
T 2g76_A 244 QCK---KGVRVVNCARG 257 (335)
T ss_dssp TSC---TTEEEEECSCT
T ss_pred hCC---CCcEEEECCCc
Confidence 885 66788877773
No 201
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=81.65 E-value=0.76 Score=39.16 Aligned_cols=34 Identities=24% Similarity=0.509 Sum_probs=27.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+..+|+|+|+|.-|..+|+.|.+ .| .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AG-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEECC
Confidence 34689999999999999998865 36 368888874
No 202
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=81.57 E-value=4.5 Score=40.82 Aligned_cols=84 Identities=19% Similarity=0.350 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch
Q 010939 216 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 294 (497)
Q Consensus 216 Ta~V~lAgll~Al~~~g~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~ 294 (497)
-.-+|-.|++--|+-.+.+|+..++|++|.+. -|.-+|.||.. .|. .+.++.++
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 33468889999999999999999999999654 57778877754 242 35555442
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHH
Q 010939 295 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVE 337 (497)
Q Consensus 295 ~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Fteevi~ 337 (497)
..+|.+.++. +|++|...+.++.++.++||
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1357788887 99999999999999999986
No 203
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=81.36 E-value=11 Score=37.82 Aligned_cols=122 Identities=15% Similarity=0.130 Sum_probs=82.0
Q ss_pred CCCCceecCccc---hhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDIQG---TASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 262 (497)
Q Consensus 204 ~~~~~FnDDiQG---Ta~V~lAgll~Al~~------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~ 262 (497)
..+.+.|----. +|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~--- 168 (333)
T 1j4a_A 92 LGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF--- 168 (333)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC---
Confidence 467777753333 344478888887762 23568899999999999999999988642
Q ss_pred hcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHH
Q 010939 263 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEA 338 (497)
Q Consensus 263 ~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteevi~~ 338 (497)
|+ +++.+|+.. . ..+ ..++. ...+|.|+++. .|+++=.-. ..++++++.++.
T Consensus 169 --G~-------~V~~~d~~~----~--~~~----~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~ 224 (333)
T 1j4a_A 169 --GA-------KVITYDIFR----N--PEL----EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIAK 224 (333)
T ss_dssp --TC-------EEEEECSSC----C--HHH----HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHHH
T ss_pred --CC-------EEEEECCCc----c--hhH----HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHhh
Confidence 64 688888742 1 101 11221 12478999987 898885421 236788999998
Q ss_pred HHccCCCceEEecCCCC
Q 010939 339 MASLNEKPIIFSLSNPT 355 (497)
Q Consensus 339 Ma~~~~rPIIFaLSNPt 355 (497)
|. +..++.-.|.-.
T Consensus 225 mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 225 MK---QDVVIVNVSRGP 238 (333)
T ss_dssp SC---TTEEEEECSCGG
T ss_pred CC---CCcEEEECCCCc
Confidence 85 667888777744
No 204
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=81.32 E-value=1.9 Score=41.92 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|.-|..+|..|.. .|. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998864 263 57888874
No 205
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=81.29 E-value=3.6 Score=43.25 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=59.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhch-hhh-cccCCCCCHHHHHhc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~-~~a-~~~~~~~~L~e~v~~ 315 (497)
.||.|+|+|.-|..+|..|.. .|. +++++|+.. .+ +...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~----~~---~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-----HGF-------VVCAFNRTV----SK---VDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSST----HH---HHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHH-----CCC-------eEEEEeCCH----HH---HHHHHhccccCCCeEEeCCHHHHHhh
Confidence 479999999999999998865 363 578888741 11 111110 000 000113578888863
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 316 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 316 v-kptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
+ ++|++| ++...+...+++++.+..+. +.-||.-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488777 44444445677887776553 356788888864
No 206
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=81.26 E-value=4.6 Score=38.96 Aligned_cols=106 Identities=11% Similarity=0.119 Sum_probs=62.9
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh----chhhhc-ccCCCCC
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----KKPWAH-EHEPVKE 308 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~----k~~~a~-~~~~~~~ 308 (497)
++..||+|.|| |-.|..+++.|++. |- .-+++.+|+...-. ....+... +..+.. +-....+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88898888888763 52 23677777753211 11111110 111111 1112246
Q ss_pred HHHHHhccCCcEEEEccCCCCCC----------------CHHHHHHHHccCCCceEEecC
Q 010939 309 LVDAVNAIKPTILIGTSGQGRTF----------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 309 L~e~v~~vkptvLIG~S~~~g~F----------------teevi~~Ma~~~~rPIIFaLS 352 (497)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999877754321 356788888776666888544
No 207
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=81.18 E-value=7 Score=39.51 Aligned_cols=83 Identities=18% Similarity=0.340 Sum_probs=46.0
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhh
Q 010939 222 AGLISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 300 (497)
Q Consensus 222 Agll~Al~~~g-~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a 300 (497)
+..+.|+.... ..-.+++|+|+|||+.|...+.+... .|. ++++.+|+. +.+..++
T Consensus 198 ~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~------------~~~~~~~ 254 (404)
T 3ip1_A 198 SVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS------------EVRRNLA 254 (404)
T ss_dssp HHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC------------HHHHHHH
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC------------HHHHHHH
Confidence 33344443333 33457899999999777655444432 364 578877653 2233333
Q ss_pred cc-------cCCCCCHHHHHhc----cCCcEEEEccCC
Q 010939 301 HE-------HEPVKELVDAVNA----IKPTILIGTSGQ 327 (497)
Q Consensus 301 ~~-------~~~~~~L~e~v~~----vkptvLIG~S~~ 327 (497)
++ .....++.+.++. -+.|++|-+++.
T Consensus 255 ~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 255 KELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp HHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred HHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 32 1112345555543 368999877764
No 208
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=81.17 E-value=1 Score=45.94 Aligned_cols=120 Identities=20% Similarity=0.219 Sum_probs=65.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhh-c--ccCCCCCHHHH
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H--EHEPVKELVDA 312 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a-~--~~~~~~~L~e~ 312 (497)
.+.||+|+|||..|-.+|+.|.+. .++.+.|++ .++ +......+. . +.....+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 356999999999999998887531 368888874 111 111111111 0 11123578888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcc
Q 010939 313 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPF 384 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv 384 (497)
+++ +|++|=+. .. .+..+++++-.+. .=.++-+|.-....+.--+.|.+ .|. .+..|+-|.|-
T Consensus 75 l~~--~DvVIn~~-P~-~~~~~v~~a~l~~--G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGAL-PG-FLGFKSIKAAIKS--KVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECC-CH-HHHHHHHHHHHHT--TCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECC-Ch-hhhHHHHHHHHHh--CCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 886 89999763 22 2556676654432 22356677632112222344433 353 33455556554
No 209
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=80.88 E-value=4.6 Score=39.44 Aligned_cols=96 Identities=19% Similarity=0.238 Sum_probs=54.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh-chhh-----h-ccc--CCCCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPW-----A-HEH--EPVKE 308 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~-k~~~-----a-~~~--~~~~~ 308 (497)
.||.|+|+|..|..+|..|.. .| .+++++|++.= +.+.+... ...+ - ... ....+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KG-------QSVLAWDIDAQ----RIKEIQDRGAIIAEGPGLAGTAHPDLLTSD 68 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHH----HHHHHHHHTSEEEESSSCCEEECCSEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCCHH----HHHHHHhcCCeEEeccccccccccceecCC
Confidence 589999999999999988864 25 35888887521 00001000 0000 0 000 01256
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCC
Q 010939 309 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSN 353 (497)
Q Consensus 309 L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSN 353 (497)
+.++++. +|++|= +... -..+++++.++.+. +..+|+.+.|
T Consensus 69 ~~~~~~~--~D~vi~-~v~~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 69 IGLAVKD--ADVILI-VVPA-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp HHHHHTT--CSEEEE-CSCG-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred HHHHHhc--CCEEEE-eCCc-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 7787765 787763 3322 23578888887653 3455666644
No 210
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=80.77 E-value=4 Score=43.42 Aligned_cols=99 Identities=15% Similarity=0.214 Sum_probs=62.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccC--CCCCHHHHHh
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE--PVKELVDAVN 314 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~--~~~~L~e~v~ 314 (497)
..+|.|+|+|.-|..+|..|... |. +++++|+.- . ........-+.... ...|+.|+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~----~---~~~~l~~~g~~g~~i~~~~s~~e~v~ 64 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----S---KVDDFLANEAKGTKVVGAQSLKEMVS 64 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHhcccCCCceeccCCHHHHHh
Confidence 35899999999999999988763 63 578888741 1 11111111010101 1367888887
Q ss_pred cc-CCcEEEEccCCCCCCCHHHHHHHHcc-CCCceEEecCCCC
Q 010939 315 AI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 355 (497)
Q Consensus 315 ~v-kptvLIG~S~~~g~Fteevi~~Ma~~-~~rPIIFaLSNPt 355 (497)
.+ +||++| ++-+.+...+++++.+..+ .+..||.-.||-.
T Consensus 65 ~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 65 KLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp TBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 54 478776 4444444667788887765 3567888888854
No 211
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=80.65 E-value=1.7 Score=48.00 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=33.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|++.||+++|+|..|+-+|+.|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 46788999999999999999999875 86 799999987
No 212
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=80.43 E-value=1.7 Score=41.72 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=25.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999998864 253 57888864
No 213
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=80.11 E-value=8.6 Score=38.96 Aligned_cols=208 Identities=16% Similarity=0.122 Sum_probs=118.0
Q ss_pred eeeecCCCCcHHHHHHHHcCCCCceecCc---cchhHHHHHHHHHHHHHh------------------------C-CCCC
Q 010939 185 IQFEDFANHNAFDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKFL------------------------G-GSLA 236 (497)
Q Consensus 185 I~~EDf~~~~af~iL~ryr~~~~~FnDDi---QGTa~V~lAgll~Al~~~------------------------g-~~l~ 236 (497)
|+.-..+..|- ++-.--+..+.+.|--- +.+|=-+++.+|+..|-. | .+|.
T Consensus 89 I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~ 167 (347)
T 1mx3_A 89 IVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIR 167 (347)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCT
T ss_pred EEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCC
Confidence 55555555442 22111234676666432 344555788888887621 1 4789
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
+.++.|+|.|..|..+|+.+.. .|+ +++.+|++- .. .. ...+ ......+|.|+++.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~--~~---~~~~--g~~~~~~l~ell~~- 223 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD--GV---ERAL--GLQRVSTLQDLLFH- 223 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT--TH---HHHH--TCEECSSHHHHHHH-
T ss_pred CCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch--hh---Hhhc--CCeecCCHHHHHhc-
Confidence 9999999999999999998864 264 588888641 11 01 0111 00112478898887
Q ss_pred CCcEEEEcc----CCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEe-----cCCCCCccccC
Q 010939 317 KPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEYG 387 (497)
Q Consensus 317 kptvLIG~S----~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~A-----sGsPf~pv~~~ 387 (497)
.|+++=.- ...++++++.++.|. +.-++.=.|+=..--|..-.+|++ +|+.--| ..-|+++ .
T Consensus 224 -aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~---~ 294 (347)
T 1mx3_A 224 -SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF---S 294 (347)
T ss_dssp -CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---T
T ss_pred -CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---C
Confidence 89887532 223678888888884 566888777744223322334433 4543322 2333221 1
Q ss_pred CeeeCCCCccccccchhhhHHHHHcCCcccCHHHHHHHHHHHhccC
Q 010939 388 DNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQV 433 (497)
Q Consensus 388 G~~~~p~Q~NN~~iFPGiglG~i~~~a~~itd~m~~aAA~aLA~~v 433 (497)
+.. --..+|..+-|=++-.. ......|...+++.+.+..
T Consensus 295 ~~~--L~~~~nvi~tPHia~~t-----~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 295 QGP--LKDAPNLICTPHAAWYS-----EQASIEMREEAAREIRRAI 333 (347)
T ss_dssp SST--TTTCSSEEECSSCTTCC-----HHHHHHHHHHHHHHHHHHH
T ss_pred Cch--HHhCCCEEEEchHHHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 111 12478999999876322 2223455556666665554
No 214
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=79.88 E-value=2.9 Score=39.18 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=46.0
Q ss_pred CCCCceEEEeCc-Ch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc----------
Q 010939 234 SLADQRFLFLGA-GE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---------- 301 (497)
Q Consensus 234 ~l~d~riv~~GA-Gs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~---------- 301 (497)
.+++++++|.|| |+ .|..+|+.|++ +| -+++++|++- +.+...+..+..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~ 79 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYHE-------RRLGETRDQLADLGLGRVEAVV 79 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCCH-------HHHHHHHHHHHhcCCCceEEEE
Confidence 478899999999 74 88888887765 36 3688888751 112222222211
Q ss_pred -ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 010939 302 -EHEPVKELVDAVNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 302 -~~~~~~~L~e~v~~v-----kptvLIG~S~~~ 328 (497)
+-....++.++++.+ +.|+||=..+..
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 111123455666655 789999776653
No 215
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=79.72 E-value=1.6 Score=42.73 Aligned_cols=100 Identities=14% Similarity=0.192 Sum_probs=58.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhc--hhhh-cccCCCCCHHHHHh
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK--KPWA-HEHEPVKELVDAVN 314 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k--~~~a-~~~~~~~~L~e~v~ 314 (497)
.||.|+|||+-|..+|..|... | .+++++|+.-+ ..=+...+.-.. ..+- ++.....++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 5899999999999999988653 5 36888887641 000000110000 0000 00011134543 44
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcc-CCCceEEecCCCC
Q 010939 315 AIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 355 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~Fteevi~~Ma~~-~~rPIIFaLSNPt 355 (497)
.+|++| ++..+ -..+++++.++.+ .+..+|..+.|--
T Consensus 69 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi 106 (312)
T 3hn2_A 69 --PMDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGL 106 (312)
T ss_dssp --CCSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSS
T ss_pred --CCCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCC
Confidence 378777 55544 3567889988865 3567888888875
No 216
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=79.61 E-value=1.2 Score=41.98 Aligned_cols=96 Identities=14% Similarity=0.183 Sum_probs=55.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHh
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVN 314 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~ 314 (497)
+..||+|.|||-.|..+++.|.+ .| -+++.++++- +.+.+. ..+.+ +-....++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~ 61 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVH 61 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhc
Confidence 34689999999888888888765 26 3678777751 112111 11111 1112234555565
Q ss_pred ccCCcEEEEccCCCC-----------CCCHHHHHHHHccCCCceEEecC
Q 010939 315 AIKPTILIGTSGQGR-----------TFTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 315 ~vkptvLIG~S~~~g-----------~Fteevi~~Ma~~~~rPIIFaLS 352 (497)
. ++|++|=+.+... ..+..+++.+.+..-+-+||.=|
T Consensus 62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4 6999986654311 02556777776655566777544
No 217
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=79.45 E-value=6.4 Score=38.04 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=59.6
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch-hchhhhc-ccCCCCCHH
Q 010939 234 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-FKKPWAH-EHEPVKELV 310 (497)
Q Consensus 234 ~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~-~k~~~a~-~~~~~~~L~ 310 (497)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+.. .+..+.. +-....++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355679999985 7777777777764 35 4688888752 111111211 0111111 111224577
Q ss_pred HHHhccCCcEEEEccCCCCC--C-----------CHHHHHHHHccCCCceEEecC
Q 010939 311 DAVNAIKPTILIGTSGQGRT--F-----------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~--F-----------teevi~~Ma~~~~rPIIFaLS 352 (497)
++++..++|++|=+.+.... . +..+++.+.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 88887789999987775432 0 345777777665567888544
No 218
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=79.41 E-value=1.7 Score=42.52 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||+|+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988865 475 57788764
No 219
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=79.25 E-value=15 Score=36.67 Aligned_cols=121 Identities=16% Similarity=0.160 Sum_probs=81.2
Q ss_pred CCCCceecCccc---hhHHHHHHHHHHHH-------------------HhCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDIQG---TASVVLAGLISAMK-------------------FLGGSLADQRFLFLGAGEAGTGIAELIALEIS 261 (497)
Q Consensus 204 ~~~~~FnDDiQG---Ta~V~lAgll~Al~-------------------~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~ 261 (497)
..+.+.|---.. +|=-+++.+|+..| ..+..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 456666643333 34447788887765 134678999999999999999999988642
Q ss_pred HhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 010939 262 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 337 (497)
Q Consensus 262 ~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteevi~ 337 (497)
|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 588888752 11 1 11 1121 2378899987 898885421 23689999999
Q ss_pred HHHccCCCceEEecCCCC
Q 010939 338 AMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 338 ~Ma~~~~rPIIFaLSNPt 355 (497)
.|. +.-++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 985 566777777643
No 220
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=79.11 E-value=2 Score=41.88 Aligned_cols=33 Identities=15% Similarity=0.255 Sum_probs=26.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..||.|+|+|.-|.++|..|.. .|. +++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 3589999999999999998865 363 57888875
No 221
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=79.05 E-value=3.8 Score=40.33 Aligned_cols=93 Identities=18% Similarity=0.238 Sum_probs=51.3
Q ss_pred cchhHHHHHHHHHHHH-HhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCC
Q 010939 214 QGTASVVLAGLISAMK-FLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL 292 (497)
Q Consensus 214 QGTa~V~lAgll~Al~-~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l 292 (497)
++.....++..+.+++ ..+. .+++++|.|||..|...+.+... .|. ++++.+|+. ..+ +
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~ 202 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV--SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---L 202 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC--TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---H
T ss_pred HHHhhhHHHHHHHHHHHhCCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---H
Confidence 4444444555566776 4433 88999999998777766654432 363 478888764 111 1
Q ss_pred chhchhhhcc--cCCCCCHHHHHhc---cCCcEEEEccCC
Q 010939 293 QHFKKPWAHE--HEPVKELVDAVNA---IKPTILIGTSGQ 327 (497)
Q Consensus 293 ~~~k~~~a~~--~~~~~~L~e~v~~---vkptvLIG~S~~ 327 (497)
...++ +|.. .....++.+.++. -+.|++|=+++.
T Consensus 203 ~~~~~-la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 241 (343)
T 2dq4_A 203 AFARP-YADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGN 241 (343)
T ss_dssp GGGTT-TCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCC
T ss_pred HHHHH-hHHhccCcCccCHHHHHHHhcCCCCCEEEECCCC
Confidence 11111 1221 1112356666653 257888877653
No 222
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=78.97 E-value=1.7 Score=42.25 Aligned_cols=35 Identities=20% Similarity=0.427 Sum_probs=28.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|+|+|||.||+..|..|.+ .|. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998864 363 2799999874
No 223
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=78.91 E-value=6.4 Score=39.52 Aligned_cols=195 Identities=13% Similarity=0.107 Sum_probs=109.0
Q ss_pred CCCCceecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 010939 204 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 260 (497)
Q Consensus 204 ~~~~~FnDDi---QGTa~V~lAgll~Al~~--------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~ 260 (497)
..|++.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 3455555321 33445677777776652 2456899999999999999999998753
Q ss_pred HHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHH
Q 010939 261 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVV 336 (497)
Q Consensus 261 ~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi 336 (497)
.|+ +++.+|+... . ....+ .+- -...+|.|+++. .|+++=.- ...++++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~---~----~~~~~-~~g---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL---D----TQTEQ-RLG---LRQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC---C----HHHHH-HHT---EEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC---c----HhHHH-hcC---ceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 364 6888887531 0 00110 110 012479999987 89888542 22468999999
Q ss_pred HHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeeeCC-------CCccccccchhhhHHH
Q 010939 337 EAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVP-------GQANNAYIFPGLGLGL 409 (497)
Q Consensus 337 ~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGsPf~pv~~~G~~~~p-------~Q~NN~~iFPGiglG~ 409 (497)
+.|. +..++.=.|+-..--|-.-.+|+ ..|+.-.|.=-=|.+-.+ .....| -+..|..+-|=++-..
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 9885 67788888874422232233443 345544331111111000 000112 1345777777765322
Q ss_pred HHcCCcccCHHHHHHHHHHHhccCC
Q 010939 410 IMSGAIRVHDDMLLAAAEALAGQVT 434 (497)
Q Consensus 410 i~~~a~~itd~m~~aAA~aLA~~v~ 434 (497)
..-.+.|...+++.|.....
T Consensus 298 -----~e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 298 -----RAVRLEIERCAAQNILQALA 317 (330)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHHHHHHc
Confidence 11235566666666666554
No 224
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=78.84 E-value=4.9 Score=38.84 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=62.0
Q ss_pred CCCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCc---cCCchhchhhhc-ccCCC
Q 010939 232 GGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL---ESLQHFKKPWAH-EHEPV 306 (497)
Q Consensus 232 g~~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~---~~l~~~k~~~a~-~~~~~ 306 (497)
.+++++.+|+|.|| |-.|..+++.|.+ .| -+++.+|+.. .... +.+. +..+.. +-...
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~ 77 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDA 77 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCH
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCH
Confidence 35688889999998 7777777777754 25 4688888741 1110 0110 111111 11122
Q ss_pred CCHHHHHhccCCcEEEEccCCCCC-C------------CHHHHHHHHccCCCceEEecC
Q 010939 307 KELVDAVNAIKPTILIGTSGQGRT-F------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 307 ~~L~e~v~~vkptvLIG~S~~~g~-F------------teevi~~Ma~~~~rPIIFaLS 352 (497)
.++.++++.+++|++|=+.+.... - +..+++.+.+..-+.|||.=|
T Consensus 78 ~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 78 GLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 357778875579999988776432 0 245677777666667888644
No 225
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=78.02 E-value=2.8 Score=39.97 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=24.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 279 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD 279 (497)
.||.|+|+|..|..+|..|.. .|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR-----AGH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH-----TTC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEEc
Confidence 489999999999999998864 253 577777
No 226
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=77.77 E-value=1.8 Score=41.42 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=25.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|..|..+|..|.. .| .+++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-----~g-------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-----AG-------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TT-------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 489999999999999998864 25 358888874
No 227
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=77.63 E-value=1.4 Score=42.94 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=59.7
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhch----hhhc-------
Q 010939 234 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----PWAH------- 301 (497)
Q Consensus 234 ~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~----~~a~------- 301 (497)
+++..||+|.|| |--|-.|++.|++ .| .+++.++++.- ..+.+. .+..
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~--------~~~~~~~~~~~l~~~~v~~~~ 66 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP--------RSPSKAKIFKALEDKGAIIVY 66 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC--------CCHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC--------CChhHHHHHHHHHhCCcEEEE
Confidence 355679999999 9888888888765 25 36888887520 011111 1111
Q ss_pred -ccCCCCCHHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHccC-CCceEE
Q 010939 302 -EHEPVKELVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLN-EKPIIF 349 (497)
Q Consensus 302 -~~~~~~~L~e~v~~vkptvLIG~S~~~g~-Fteevi~~Ma~~~-~rPIIF 349 (497)
+-....+|.++++..++|++|=+.+..++ -+..+++++.+.. -+-+|+
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 11122468888986679999988775433 3678999988776 445554
No 228
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=77.35 E-value=3.9 Score=37.06 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=54.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCC--chhchhhhc-ccCCCCCHHHHH
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL--QHFKKPWAH-EHEPVKELVDAV 313 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l--~~~k~~~a~-~~~~~~~L~e~v 313 (497)
.+|+|.|| |-.|..+++.|.+. .| -++++++++.- .+.+.+ ...+..+.. +-....++.+++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 71 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQLK---TRIPPEIIDHERVTVIEGSFQNPGXLEQAV 71 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSHH---HHSCHHHHTSTTEEEEECCTTCHHHHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCcc---ccchhhccCCCceEEEECCCCCHHHHHHHH
Confidence 35999996 77888888877632 36 36888877511 010001 000111111 111224677888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEe
Q 010939 314 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFS 350 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFa 350 (497)
+. +|++|=+.+..+.-++.+++.|.+..-+-||+.
T Consensus 72 ~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 72 TN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp TT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 75 899997766433226778888876554456654
No 229
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=77.23 E-value=6.8 Score=38.75 Aligned_cols=90 Identities=20% Similarity=0.276 Sum_probs=52.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc----CCCCCHHH-
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELVD- 311 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~e- 311 (497)
-.||.|+|+|.-|..+|..|... |. ..+++++|++- +.+. .+.+. ....++.|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~-----~a~~~G~~~~~~~~~~~~ 90 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESIS-----KAVDLGIIDEGTTSIAKV 90 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHH-----HHHHTTSCSEEESCTTGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHH-----HHHHCCCcchhcCCHHHH
Confidence 36999999999999999988763 65 14788888751 1111 11110 01234555
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHcc-CCCceEEecC
Q 010939 312 AVNAIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLS 352 (497)
Q Consensus 312 ~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~-~~rPIIFaLS 352 (497)
+++. +|++| ++.... -.+++++.+..+ .+.-||.-.+
T Consensus 91 ~~~~--aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 91 EDFS--PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp GGGC--CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred hhcc--CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 5655 67666 444433 345666666654 3344554443
No 230
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=77.00 E-value=4.4 Score=38.56 Aligned_cols=97 Identities=16% Similarity=0.228 Sum_probs=56.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 317 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 317 (497)
.||.|+|+|.-|..+|..|.. .|.. .+++++|++. +.+...+ .+-.......++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-------~~~~~~~-~~g~~~~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-------ESISKAV-DLGIIDEGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-------HHHHHHH-HTTSCSEEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-------HHHHHHH-HCCCcccccCCHHHHhcC-C
Confidence 379999999999999998865 3641 3688888741 1111110 000000012456677761 3
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcc-CCCceEEecCCCC
Q 010939 318 PTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 355 (497)
Q Consensus 318 ptvLIG~S~~~g~Fteevi~~Ma~~-~~rPIIFaLSNPt 355 (497)
+|++| ++..+ -.++++++.+..+ .+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88887 44433 2566777777653 3455777777754
No 231
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=76.53 E-value=5.8 Score=38.27 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=58.0
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHH
Q 010939 233 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELV 310 (497)
Q Consensus 233 ~~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~ 310 (497)
++++..+|+|.|| |-.|..+++.|++ .| -+++.+|+.. .. ..+ .+.. +-....++.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~-----~~~~~Dl~d~~~~~ 72 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGG-----EEVVGSLEDGQALS 72 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCC-----SEEESCTTCHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCc-----cEEecCcCCHHHHH
Confidence 4677889999998 8888888888865 36 3678887752 10 111 1111 112224577
Q ss_pred HHHhccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCceEEecC
Q 010939 311 DAVNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~F--------------teevi~~Ma~~~~rPIIFaLS 352 (497)
++++ ++|++|=+.+....- |..+++.+.+..-+.|||.=|
T Consensus 73 ~~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 73 DAIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 8887 499999877654211 245788888777678888655
No 232
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=76.51 E-value=1.8 Score=41.25 Aligned_cols=34 Identities=12% Similarity=0.377 Sum_probs=28.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998864 363 699999874
No 233
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=76.42 E-value=3.5 Score=37.21 Aligned_cols=95 Identities=8% Similarity=0.158 Sum_probs=53.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhc
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 315 (497)
.||+|.|| |-.|..+++.|.+ .| .+++.++++.- +.+.+.+ ...+.+ +-....++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~----~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE----KIKIENE-HLKVKKADVSSLDEVCEVCKG 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG----GCCCCCT-TEEEECCCTTCHHHHHHHHTT
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc----cchhccC-ceEEEEecCCCHHHHHHHhcC
Confidence 58999996 7677777766654 35 47888888621 1111211 111111 11222467888885
Q ss_pred cCCcEEEEccCCCC----------CCCHHHHHHHHccCCCceEEec
Q 010939 316 IKPTILIGTSGQGR----------TFTKEVVEAMASLNEKPIIFSL 351 (497)
Q Consensus 316 vkptvLIG~S~~~g----------~Fteevi~~Ma~~~~rPIIFaL 351 (497)
+|++|=+.+... ..+..+++.|.+..-+.+||.=
T Consensus 68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 999997765431 0244567777765555566643
No 234
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=76.22 E-value=10 Score=37.76 Aligned_cols=121 Identities=15% Similarity=0.180 Sum_probs=76.3
Q ss_pred CCCceecCc---cchhHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 010939 205 THLVFNDDI---QGTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 260 (497)
Q Consensus 205 ~~~~FnDDi---QGTa~V~lAgll~Al~~---------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~ 260 (497)
.+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~-- 167 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG-- 167 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT--
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH--
Confidence 455555432 23344467777777653 2356899999999999999999998863
Q ss_pred HHhcCCChhhhcCeEEEEcc-CCcccCCCccCCchhchhhhcccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHH
Q 010939 261 SKQTNMPLEETRKKIWLVDS-KGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEV 335 (497)
Q Consensus 261 ~~~~G~s~eeA~~~i~~vD~-~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vkptvLIG~S~----~~g~Fteev 335 (497)
.| -+++.+|+ .. . . ...+ .+ ......++.|+++. .|+++=.-- ..++++++.
T Consensus 168 ---~G-------~~V~~~d~~~~----~--~--~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~~ 224 (320)
T 1gdh_A 168 ---FD-------MDIDYFDTHRA----S--S--SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKAT 224 (320)
T ss_dssp ---TT-------CEEEEECSSCC----C--H--HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ---CC-------CEEEEECCCCc----C--h--hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHHH
Confidence 25 36888887 41 0 0 0000 01 00112478898887 898874321 235788888
Q ss_pred HHHHHccCCCceEEecCC
Q 010939 336 VEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 336 i~~Ma~~~~rPIIFaLSN 353 (497)
++.|. +.-++.-.|.
T Consensus 225 l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 225 IKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HTTSC---TTEEEEECSC
T ss_pred HhhCC---CCcEEEECCC
Confidence 88774 5667777776
No 235
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=76.22 E-value=13 Score=36.31 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=61.8
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch-hchhhhc-ccC-CCCCH
Q 010939 234 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-FKKPWAH-EHE-PVKEL 309 (497)
Q Consensus 234 ~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~-~k~~~a~-~~~-~~~~L 309 (497)
+++..||+|.|| |-.|..+++.|++. .| -+++.+|+.. .+...+.. .+..+.. +-. ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999995 88888888887653 24 4788888752 11111111 1112221 111 22457
Q ss_pred HHHHhccCCcEEEEccCCCC----------------CCCHHHHHHHHccCCCceEEecC
Q 010939 310 VDAVNAIKPTILIGTSGQGR----------------TFTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 310 ~e~v~~vkptvLIG~S~~~g----------------~Fteevi~~Ma~~~~rPIIFaLS 352 (497)
.++++. +|++|=+.+... .-|..+++.+.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778885 999997665432 23467888888877 78888665
No 236
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=76.17 E-value=2.4 Score=41.84 Aligned_cols=38 Identities=18% Similarity=0.111 Sum_probs=28.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+.+..+|+|+|||.||+..|..|.+ .| .++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G-------~~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NG-------WDVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecCCC
Confidence 3456799999999999999988865 36 36888987643
No 237
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=76.14 E-value=2.4 Score=39.49 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|||.||+..|..|.. .| .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----AR-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCC
Confidence 589999999999999988865 36 368999974
No 238
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=75.93 E-value=5.2 Score=37.55 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=24.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 280 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~ 280 (497)
||.|+|+|.-|..+|..|... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 799999999999999998653 53 5777665
No 239
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=75.71 E-value=5.8 Score=37.87 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=57.7
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh----chhhhc-ccCCCCCH
Q 010939 236 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----KKPWAH-EHEPVKEL 309 (497)
Q Consensus 236 ~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~----k~~~a~-~~~~~~~L 309 (497)
++.+|+|.|| |-.|..+++.|.+ .| .+++.+|++.--.. .+.+... +..+.. +-....++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~ 67 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRSGEFA--SWRLKELGIENDVKIIHMDLLEFSNI 67 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCCSTTT--THHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCCcccc--cccHhhccccCceeEEECCCCCHHHH
Confidence 4578999998 8788888877764 36 46888887521000 0001000 011111 11122457
Q ss_pred HHHHhccCCcEEEEccCCCCC------C----------CHHHHHHHHccCC-CceEEecC
Q 010939 310 VDAVNAIKPTILIGTSGQGRT------F----------TKEVVEAMASLNE-KPIIFSLS 352 (497)
Q Consensus 310 ~e~v~~vkptvLIG~S~~~g~------F----------teevi~~Ma~~~~-rPIIFaLS 352 (497)
.++++.+++|++|=+.+.... + +..+++.+.+... +.|||.=|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 788888889999988875421 0 2345555555443 67887644
No 240
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=75.58 E-value=1.9 Score=47.99 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=31.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
++.||+++|+|..|+-+++.|+.+ |+ ++|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 688999999999999999988764 86 799999987
No 241
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=75.50 E-value=1.5 Score=44.33 Aligned_cols=121 Identities=17% Similarity=0.134 Sum_probs=71.8
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc--ccCCCccCCchhchhhhcccCCCCCHHHHHh
Q 010939 238 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL--IVSSRLESLQHFKKPWAHEHEPVKELVDAVN 314 (497)
Q Consensus 238 ~riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL--i~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~ 314 (497)
.||++.| ||..|..+|.+|+. .|+-.|+-.-.+.++|.+.- ..++..-+|.+...+|.++.....++.++++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFK 78 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhC
Confidence 5899999 79999999888864 25411111113899998521 0111111133322233332222357888998
Q ss_pred ccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCce-EEecCCCCCCCCCCHHHHhcc
Q 010939 315 AIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPI-IFSLSNPTSQSECTAEEAYTW 368 (497)
Q Consensus 315 ~vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPI-IFaLSNPt~~~E~~peda~~~ 368 (497)
+ .|++|=+.+.+ |- ..+++++.+.+++.+-+ |+-.|||. .++..-+++.
T Consensus 79 d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~ 142 (333)
T 5mdh_A 79 D--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKS 142 (333)
T ss_dssp T--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHT
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHH
Confidence 8 99988554433 21 24678888889888875 99999995 3444444443
No 242
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=75.24 E-value=2.1 Score=42.16 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=54.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc-ccCCCccCCchh--chhhhcccCCCCCH
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL-IVSSRLESLQHF--KKPWAHEHEPVKEL 309 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL-i~~~r~~~l~~~--k~~~a~~~~~~~~L 309 (497)
......||.|+|+|+-|..+|..|... | .+++++ ++.= +..=+...++.. ...+........++
T Consensus 15 ~~~~~~kI~IiGaGa~G~~~a~~L~~~-----G-------~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~ 81 (318)
T 3hwr_A 15 LYFQGMKVAIMGAGAVGCYYGGMLARA-----G-------HEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP 81 (318)
T ss_dssp -----CEEEEESCSHHHHHHHHHHHHT-----T-------CEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG
T ss_pred hhccCCcEEEECcCHHHHHHHHHHHHC-----C-------CeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH
Confidence 345667999999999999999998753 5 345555 3210 000000000000 00000000001334
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCCC
Q 010939 310 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 356 (497)
Q Consensus 310 ~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt~ 356 (497)
.+ ++ .+|++| ++... -..+++++.++.+. +..+|..++|.-.
T Consensus 82 ~~-~~--~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~~~nGi~ 124 (318)
T 3hwr_A 82 SA-VQ--GADLVL-FCVKS-TDTQSAALAMKPALAKSALVLSLQNGVE 124 (318)
T ss_dssp GG-GT--TCSEEE-ECCCG-GGHHHHHHHHTTTSCTTCEEEEECSSSS
T ss_pred HH-cC--CCCEEE-EEccc-ccHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 33 33 378776 44433 26788999888653 4568888899864
No 243
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=75.24 E-value=2.3 Score=39.04 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=52.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh-chhhhc-ccCCCCCHHHH-Hhc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWAH-EHEPVKELVDA-VNA 315 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~-k~~~a~-~~~~~~~L~e~-v~~ 315 (497)
||+|+|+|..|..+|+.|... | .+++++|++ ..+.+.+... ...+-. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 799999999999999988652 5 468889874 1110111110 001111 11111235554 44
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcc-CCCceEEecCC
Q 010939 316 IKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSN 353 (497)
Q Consensus 316 vkptvLIG~S~~~g~Fteevi~~Ma~~-~~rPIIFaLSN 353 (497)
++|++|-+.... .....+..+++. +..+-|++..|
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 589998665543 233444455543 56666666655
No 244
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=75.07 E-value=2.6 Score=42.31 Aligned_cols=36 Identities=28% Similarity=0.439 Sum_probs=29.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCC
Confidence 589999999999999998865 3642 37999999763
No 245
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=74.97 E-value=2.6 Score=39.59 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..+|+|+|||.||+..|..|.+ .| .++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YM-------LKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CC-------CcEEEEecc
Confidence 4689999999999999988865 36 358999997
No 246
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=74.75 E-value=2.5 Score=40.50 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|+|+|||.||+..|..|.. .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999988754 35 3689999864
No 247
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=74.54 E-value=4.8 Score=40.24 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=65.2
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCC--CCCHHHHHhc
Q 010939 239 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP--VKELVDAVNA 315 (497)
Q Consensus 239 riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~--~~~L~e~v~~ 315 (497)
||.|+| +|..|..+|.+|... .++ ...+.++|..-. ..+..-+|.+. ++-..-.. ..+..++.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 899999 899999998777542 243 257999999741 12111112211 11000000 0356788888
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCceEEecCCCC
Q 010939 316 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 316 vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
.|+.|=+.+.+ |- +-+++++.+.+++..-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99988665543 21 1246778888999999999999997
No 248
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=74.46 E-value=5 Score=38.04 Aligned_cols=31 Identities=16% Similarity=0.176 Sum_probs=25.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
||.|+|+|.-|..+|..|.. .|. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-----RGH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 79999999999999998865 253 68888874
No 249
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=74.39 E-value=9.4 Score=39.26 Aligned_cols=108 Identities=11% Similarity=0.091 Sum_probs=59.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCC--C-CHH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--K-ELV 310 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~--~-~L~ 310 (497)
.++++||+|+|.|-+|++.|+.|.+ .| .++...|++-.. +.+..++ ..... + .-.
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G-------~~v~~~D~~~~~---------~~~~~l~-~G~~~~~g~~~~ 59 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RG-------VTPRVMDTRMTP---------PGLDKLP-EAVERHTGSLND 59 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TT-------CCCEEEESSSSC---------TTGGGSC-TTSCEEESSCCH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CC-------CEEEEEECCCCc---------chhHHhh-CCCEEEECCCcH
Confidence 3667899999999999999866643 47 367788886321 1111222 11111 1 125
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCCCCCCCCHHHHhccccCcEEEecCC
Q 010939 311 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGS 379 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt~~~E~~peda~~~t~Grai~AsGs 379 (497)
+.++ .+|.+|=-++.+. -++++..... ...|++ + | .|-+++..+.+.|--|||
T Consensus 60 ~~~~--~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~---~------~--~~~~~~~~~~~vI~VTGT 112 (439)
T 2x5o_A 60 EWLM--AADLIVASPGIAL-AHPSLSAAAD--AGIEIV---G------D--IELFCREAQAPIVAITGS 112 (439)
T ss_dssp HHHH--TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE---C------H--HHHHHHHCCSCEEEEECS
T ss_pred HHhc--cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE---E------H--HHHHHHhcCCCEEEEECC
Confidence 6676 4888774444431 3466555432 233433 1 1 233444445677777885
No 250
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=73.99 E-value=2.9 Score=39.59 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..+|||+|||.||+..|..|.. .| .++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQ-------ASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEEcC
Confidence 3589999999999999988764 35 368999986
No 251
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=76.13 E-value=0.66 Score=43.17 Aligned_cols=92 Identities=11% Similarity=0.106 Sum_probs=54.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHh
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 314 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~ 314 (497)
+.+.||.|+|+|.-|..+|..|... | .+++++|+.-- . +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 5567899999999999999988653 4 25677776421 1 111 111111125666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 315 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
. +|++| ++..+. -+++++ ..+...+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~-~l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLA-ELADSLKGRVLIDVSNNQ 108 (201)
Confidence 5 77766 333332 345555 233233456888888876
No 252
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=73.60 E-value=3.3 Score=36.28 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+++|+|+|.+|+-.|..|.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 4799999999999999888652 5 478999876
No 253
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=73.59 E-value=3.4 Score=40.82 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=27.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|.-|.++|..|... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999998753 51 368888876
No 254
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=73.24 E-value=3 Score=42.65 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=31.6
Q ss_pred HhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 230 FLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 230 ~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+.++.-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444456799999999999999988865 35 46888887644
No 255
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=72.75 E-value=3.4 Score=39.66 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G-------~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GG-------HEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4589999999999999988865 36 469999987
No 256
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=72.64 E-value=4 Score=41.23 Aligned_cols=37 Identities=27% Similarity=0.422 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
+.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 3459999999999999999981 123 579999987543
No 257
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=72.63 E-value=4 Score=32.74 Aligned_cols=88 Identities=17% Similarity=0.177 Sum_probs=50.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHh
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVN 314 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~ 314 (497)
...+|+|+|+|..|..+++.|.. .|. .+++++|++. .+.+.+......+.. +.....++.++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 68 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AALAVLNRMGVATKQVDAKDEAGLAKALG 68 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HHHHHHHTTTCEEEECCTTCHHHHHHHTT
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HHHHHHHhCCCcEEEecCCCHHHHHHHHc
Confidence 35699999999999999888865 352 4688888751 110101100000100 1111235667776
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcc
Q 010939 315 AIKPTILIGTSGQGRTFTKEVVEAMASL 342 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~Fteevi~~Ma~~ 342 (497)
. +|++|=+.+ ..++..+++.+.+.
T Consensus 69 ~--~d~vi~~~~--~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 69 G--FDAVISAAP--FFLTPIIAKAAKAA 92 (118)
T ss_dssp T--CSEEEECSC--GGGHHHHHHHHHHT
T ss_pred C--CCEEEECCC--chhhHHHHHHHHHh
Confidence 4 899886653 34667777776543
No 258
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=72.62 E-value=15 Score=34.82 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=42.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHH
Q 010939 232 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 311 (497)
Q Consensus 232 g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 311 (497)
..+++++++||.||++ ||...++..+.+ +| -+++++|++.- .+......+.-+-....++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YG-------AKVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999864 344444444444 36 36888887521 111111111112222234555
Q ss_pred HHhcc-----CCcEEEEccCC
Q 010939 312 AVNAI-----KPTILIGTSGQ 327 (497)
Q Consensus 312 ~v~~v-----kptvLIG~S~~ 327 (497)
+++.+ ++|+||=..+.
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~ 91 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGI 91 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 56554 79999977664
No 259
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=72.60 E-value=3 Score=40.24 Aligned_cols=31 Identities=23% Similarity=0.458 Sum_probs=25.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
-|+|+|||.||+..|..|.. .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 48999999999999988865 475 57788874
No 260
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=72.37 E-value=6 Score=39.39 Aligned_cols=41 Identities=20% Similarity=0.343 Sum_probs=27.1
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 309 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 309 L~e~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
+...++..|||++||..+-. --.....|+....|+|.=-+|
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 34568888999999986643 122223355568899976555
No 261
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=72.30 E-value=7.7 Score=37.72 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=25.9
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+| +|.-|..+|..|.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4899999 99999999998864 363 68888864
No 262
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=72.18 E-value=3.3 Score=43.53 Aligned_cols=75 Identities=19% Similarity=0.156 Sum_probs=43.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc-cCCCCCHHH
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVD 311 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e 311 (497)
..|...|++|+|.+.-..+++++|.+ .|+.. +.+.-.. ..+.+... +...- ..+...|++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~~~~------~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAVVPA------RAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEEESS------CCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEEECC------CChhhhhC--ccCcEEeCCHHHHHH
Confidence 34778899999999999999998843 48732 2211111 11111110 00000 011234777
Q ss_pred HHhccCCcEEEEccC
Q 010939 312 AVNAIKPTILIGTSG 326 (497)
Q Consensus 312 ~v~~vkptvLIG~S~ 326 (497)
.++..+||.+||-|-
T Consensus 370 ~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH 384 (458)
T ss_dssp HHHHHTCSEEEECTT
T ss_pred HHHhcCCCEEEEChh
Confidence 888999999999544
No 263
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=72.13 E-value=3.1 Score=41.59 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+|||+|||.||+..|..|.+... .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 13 4788888764
No 264
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=71.84 E-value=4.4 Score=40.14 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 3589999999999999988754 364 6899999743
No 265
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=71.82 E-value=2.6 Score=40.03 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..+|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLAR-----AEI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4689999999999999998865 363 58889984
No 266
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=71.82 E-value=11 Score=35.85 Aligned_cols=93 Identities=12% Similarity=0.214 Sum_probs=58.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhc
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 315 (497)
.||+|.|| |-.|..+++.|.+ .| .+++.+++. .+..+ +. ...+.. +-. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888888765 25 368888886 22111 21 111211 112 345777777
Q ss_pred cCCcEEEEccCCCCC------------CCHHHHHHHHccCCCceEEecC
Q 010939 316 IKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 316 vkptvLIG~S~~~g~------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
++|++|=+.+..+. -+..+++.+.+..-+-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 59999988776432 1367888888776666888544
No 267
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=71.74 E-value=2.8 Score=42.73 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||||+|+|.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999988653 21 1368888876
No 268
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=71.15 E-value=4 Score=40.86 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=28.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..-
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCCC
Confidence 4689999999999999988865 374 33888887643
No 269
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=71.11 E-value=3.4 Score=41.54 Aligned_cols=38 Identities=13% Similarity=0.287 Sum_probs=30.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+..+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 35689999999999999999865 3642 46999998643
No 270
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=70.72 E-value=14 Score=34.96 Aligned_cols=94 Identities=16% Similarity=0.252 Sum_probs=54.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 316 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 316 (497)
+|+|.|| |-.|..+++.|.+ .| .++.+++.. ..+.+.+.+. ..+.. +-.. .++.++++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~-~~~~~~Dl~~-~~~~~~~~~- 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEA-ARLVKADLAA-DDIKDYLKG- 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTT-EEEECCCTTT-SCCHHHHTT-
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCC-cEEEECcCCh-HHHHHHhcC-
Confidence 7899997 7777777777653 24 344444321 1111111111 11111 2233 678888884
Q ss_pred CCcEEEEccCCCCC-C---------------CHHHHHHHHccCCCceEEecC
Q 010939 317 KPTILIGTSGQGRT-F---------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 317 kptvLIG~S~~~g~-F---------------teevi~~Ma~~~~rPIIFaLS 352 (497)
+|++|-+.+.... . +..+++.|.+..-+.|||.=|
T Consensus 64 -~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 -AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp -CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred -CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988775421 1 234778887777778998655
No 271
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=70.69 E-value=3.5 Score=40.23 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=28.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+..|+|+|||.+|+.+|..|.+ .| .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----EN-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCCCC
Confidence 4589999999999999999875 36 46999998743
No 272
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=70.63 E-value=3.8 Score=39.21 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 4689999999999999988865 36 369999987
No 273
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=70.59 E-value=3.9 Score=40.66 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=28.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
-+..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 445699999999999999988865 374 688888764
No 274
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=70.57 E-value=3.6 Score=40.19 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4589999999999999998875 363 699999874
No 275
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=70.48 E-value=3.9 Score=38.35 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=26.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~-vD~~ 281 (497)
..+|||+|||.||+..|..|... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988763 63 4566 8874
No 276
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=70.34 E-value=3.9 Score=40.77 Aligned_cols=37 Identities=19% Similarity=0.422 Sum_probs=29.5
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
.++.+|+|+|||.||+..|..|.+ .|+ ++.++|+..-
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 456799999999999999988864 363 7889998643
No 277
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=70.15 E-value=4.6 Score=40.16 Aligned_cols=35 Identities=11% Similarity=0.197 Sum_probs=28.0
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
...+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 45689999999999999998865 364 678888753
No 278
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=70.12 E-value=3.7 Score=39.15 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.+|+|+|+|.||+..|..+.+ .| .++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SG-------FSVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCC
Confidence 4689999999999999988865 36 368999985
No 279
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=70.10 E-value=16 Score=38.19 Aligned_cols=40 Identities=23% Similarity=0.258 Sum_probs=26.7
Q ss_pred HHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 229 KFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 229 ~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+..++...-.||.|+|+|.-|.++|..+.+ | -+++++|++
T Consensus 28 ~~~~r~~~~mkIaVIGlG~mG~~lA~~La~------G-------~~V~~~D~~ 67 (432)
T 3pid_A 28 QQMGRGSEFMKITISGTGYVGLSNGVLIAQ------N-------HEVVALDIV 67 (432)
T ss_dssp -------CCCEEEEECCSHHHHHHHHHHHT------T-------SEEEEECSC
T ss_pred cccccccCCCEEEEECcCHHHHHHHHHHHc------C-------CeEEEEecC
Confidence 455666677799999999999999987642 4 468888864
No 280
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=69.90 E-value=4.2 Score=39.59 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|+|+|||.||+..|..|.. .| .++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 5689999999999999988754 35 3689999864
No 281
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=69.89 E-value=4 Score=39.82 Aligned_cols=36 Identities=25% Similarity=0.262 Sum_probs=29.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~-----~G-------~~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK-----QG-------VKTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCCCC
Confidence 3579999999999999998865 36 369999987543
No 282
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=69.88 E-value=3.8 Score=38.52 Aligned_cols=90 Identities=13% Similarity=0.155 Sum_probs=52.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 317 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 317 (497)
.||.|+|+|..|..++..|.. .| .+++++|++ . +........+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 489999999999999887753 24 467888764 1 1111111111 11123578888875
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCCCC
Q 010939 318 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 355 (497)
Q Consensus 318 ptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSNPt 355 (497)
+|++|= +..+ -..+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~-~v~~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVIL-GIKP-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEE-CSCG-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEE-EeCc-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 888773 3333 34566766653 334666665533
No 283
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=69.52 E-value=4.1 Score=38.47 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=27.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|+|.||+..|..|.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999988865 363 279999985
No 284
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=69.45 E-value=12 Score=39.98 Aligned_cols=99 Identities=13% Similarity=0.230 Sum_probs=55.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCH----HHH
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKEL----VDA 312 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L----~e~ 312 (497)
+.|||++|||+.|-++|.+|++. .++. ..+|.+.|++-- .+ +-.......+....-...+. .++
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~---~~-~~~~~~g~~~~~~~Vdadnv~~~l~aL 80 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT---KV-DVAQQYGVSFKLQQITPQNYLEVIGST 80 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC---SC-CHHHHHTCEEEECCCCTTTHHHHTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh---hh-hHHhhcCCceeEEeccchhHHHHHHHH
Confidence 46899999999999999999764 3442 246888887521 11 10111111221111111223 335
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 313 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
|+. +|++|=+|- ..++.+++++-.+.. ==.+-++|
T Consensus 81 l~~--~DvVIN~s~--~~~~l~Im~acleaG--v~YlDTa~ 115 (480)
T 2ph5_A 81 LEE--NDFLIDVSI--GISSLALIILCNQKG--ALYINAAT 115 (480)
T ss_dssp CCT--TCEEEECCS--SSCHHHHHHHHHHHT--CEEEESSC
T ss_pred hcC--CCEEEECCc--cccCHHHHHHHHHcC--CCEEECCC
Confidence 554 599996553 357778887766422 23555665
No 285
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=69.33 E-value=13 Score=33.22 Aligned_cols=50 Identities=12% Similarity=0.197 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 220 VLAGLISAMKFLGGSLADQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 220 ~lAgll~Al~~~g~~l~d~riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.++..+.+++-...--.++++++.| +|..|..++.++... | -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 4445555664333334578999999 487887777766542 6 257877764
No 286
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=69.31 E-value=4.2 Score=42.51 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||.|+|+|.-|..+|..|.+. | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 5899999999999999998763 6 368888875
No 287
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=69.27 E-value=4.3 Score=40.51 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=26.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----G-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----C-------CeEEEEecCC
Confidence 699999999999999988763 6 4688888753
No 288
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=69.19 E-value=2.3 Score=45.69 Aligned_cols=102 Identities=15% Similarity=0.175 Sum_probs=62.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCC--------ccCCchhchhhhc---
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR--------LESLQHFKKPWAH--- 301 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r--------~~~l~~~k~~~a~--- 301 (497)
+.|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+=+ ..+. .+++-..|..-+.
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D~V-e~sNL~RQ~l~~~~dvG~~Ka~~a~~~l 95 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGNQV-SGEDAGNNFFLQRSSIGKNRAEAAMEFL 95 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCCBB-CHHHHHHCTTCCGGGBTSBHHHHHHHHH
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCCEe-chhhcccCccCChhhcCcHHHHHHHHHH
Confidence 347788999999999999999999864 86 89999997632 1110 0112112222111
Q ss_pred -c-cCCC------CCHHH-------HHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEEe
Q 010939 302 -E-HEPV------KELVD-------AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFS 350 (497)
Q Consensus 302 -~-~~~~------~~L~e-------~v~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFa 350 (497)
. .+.. ..+.+ .++ +.|++|.++.. .=+.-.|-.++.....|.|.+
T Consensus 96 ~~lNp~v~v~~~~~~~~~~~~~~~~~~~--~~DvVi~~~d~--~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 96 QELNSDVSGSFVEESPENLLDNDPSFFC--RFTVVVATQLP--ESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HTTCTTSBCCEESSCHHHHHHSCGGGGG--GCSEEEEESCC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHhCCCCeEEEeCCCcchhhhhhHHHhc--CCCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEE
Confidence 1 1111 23433 233 47999877542 335566666676678899887
No 289
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=69.15 E-value=4.5 Score=40.83 Aligned_cols=38 Identities=21% Similarity=0.407 Sum_probs=29.2
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 010939 232 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 280 (497)
Q Consensus 232 g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~ 280 (497)
+..+++..|||+|||.+|+.+|..|.+. | ..++.++|+
T Consensus 18 ~~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 18 GSHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 3345677999999999999999988763 4 147999998
No 290
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=69.05 E-value=4.7 Score=41.97 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=28.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+..+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 456899999999999999998753 63 58999986
No 291
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=68.95 E-value=5.5 Score=37.47 Aligned_cols=86 Identities=12% Similarity=0.268 Sum_probs=54.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccC
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 317 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 317 (497)
||+|.|| |-.|..+++.|. . | .+++.+|++.-.... ++. ...++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~~---D~~-----------d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFCG---DFS-----------NPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSCC---CTT-----------CHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccccc---cCC-----------CHHHHHHHHHhcC
Confidence 7999998 888888877765 2 4 468888876411110 111 1235777888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 318 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 318 ptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+|++|=+.+.... -+..+++.+.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988775431 14566777665544 4887654
No 292
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=68.94 E-value=29 Score=34.82 Aligned_cols=92 Identities=15% Similarity=0.177 Sum_probs=62.8
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHH
Q 010939 232 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 311 (497)
Q Consensus 232 g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 311 (497)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. + + ..... .....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~~-----~-~---~~~~~----~~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVVK-----R-E---DLKEK----GCVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC-----C-H---HHHHT----TCEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCcc-----c-h---hhhhc----CceecCHHH
Confidence 4678899999999999999999988653 64 577777631 1 1 11111 112357999
Q ss_pred HHhccCCcEEEEc----cCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 312 AVNAIKPTILIGT----SGQGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 312 ~v~~vkptvLIG~----S~~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
.++. .|+++=. ....++|+++.++.|. +..++.=.|.
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR 231 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR 231 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc
Confidence 9988 8988743 1224799999999995 5666665554
No 293
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=68.80 E-value=4.5 Score=41.41 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999987764 35 479999987
No 294
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=68.75 E-value=4.3 Score=39.63 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=28.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+..|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 4579999999999999988865 363 6888888753
No 295
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=68.68 E-value=14 Score=35.36 Aligned_cols=97 Identities=18% Similarity=0.117 Sum_probs=58.9
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhh----------hc-ccC
Q 010939 237 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW----------AH-EHE 304 (497)
Q Consensus 237 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~----------a~-~~~ 304 (497)
+.+|+|.|| |-.|..+++.|.+ .| -+++++|+.. . ........+ .+ +-.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6677777777654 36 4688888742 1 111111111 11 111
Q ss_pred CCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 305 PVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 305 ~~~~L~e~v~~vkptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
...++.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22467788886789999987765421 1346788888777678888654
No 296
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=68.59 E-value=11 Score=35.90 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=57.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhc
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 315 (497)
.||+|.|| |-.|..+++.|.+ .| -+++.+|+.- ....+.+.. +..+.. +-....++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37999986 8788888877765 25 3688887641 111111211 111111 11122457778875
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 316 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 316 vkptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
.++|++|=+.+.... -+..+++.+.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 569999988775421 1345677776665567888544
No 297
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=68.47 E-value=4.4 Score=38.64 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999998865 374 688899863
No 298
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=68.37 E-value=5.3 Score=38.97 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4589999999999999998854 36 4799999864
No 299
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=68.36 E-value=6.7 Score=42.31 Aligned_cols=39 Identities=10% Similarity=0.229 Sum_probs=31.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccc
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV 285 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~ 285 (497)
+++.+|+|+|||.||+..|-.|.. .| -++.++|+.-...
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G-------~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LG-------HDVTIYERSAFPR 59 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSCSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CC-------CCEEEEcCCCCCC
Confidence 567899999999999999988865 36 3799999984433
No 300
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=68.35 E-value=4.9 Score=40.55 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=29.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 489999999999999998865 3642 469999987543
No 301
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=68.33 E-value=7.9 Score=36.78 Aligned_cols=78 Identities=12% Similarity=0.150 Sum_probs=43.9
Q ss_pred CCCCceEEEeCcC-h--HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc------ccC
Q 010939 234 SLADQRFLFLGAG-E--AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EHE 304 (497)
Q Consensus 234 ~l~d~riv~~GAG-s--Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~------~~~ 304 (497)
.+++.++||.||+ . .|.++|+.|.+ +| -+++++|++-+ . +.+...+..+.+ +-.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 55666666654 36 36888888640 0 111111111110 111
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 010939 305 PVKELVDAVNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 305 ~~~~L~e~v~~v-----kptvLIG~S~~~ 328 (497)
...++.++++.+ ++|+||=..+..
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 223455555554 789999877654
No 302
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=68.25 E-value=9.6 Score=34.64 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=54.7
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHH
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 312 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~ 312 (497)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. .+.+.+...+..+.. +-....++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44578999995 77777777777653 52 12788888752 111111111111111 11122456666
Q ss_pred HhccCCcEEEEccCCCCC-------------CCHHHHHHHHccCCCceEEecC
Q 010939 313 VNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~-------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
++ ++|++|=+.+.... -+..+++.|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 66 49999987765310 1345666666554445666433
No 303
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=68.21 E-value=4.2 Score=39.48 Aligned_cols=35 Identities=11% Similarity=0.253 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G-------~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AG-------LNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCCCC
Confidence 479999999999999998875 36 369999987543
No 304
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=68.15 E-value=4.2 Score=41.44 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=28.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999998864 3641 378999987
No 305
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=68.07 E-value=7.1 Score=37.07 Aligned_cols=87 Identities=14% Similarity=0.194 Sum_probs=55.1
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhc
Q 010939 237 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 315 (497)
Q Consensus 237 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 315 (497)
..||+|.|| |-.|..+++.|.+ .|. +++.+++. ... ++. ...++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-Ccc-----------CHHHHHHHHHh
Confidence 468999996 8888888777754 352 46666653 011 121 11357777876
Q ss_pred cCCcEEEEccCCCCC-----------------CCHHHHHHHHccCCCceEEecC
Q 010939 316 IKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 316 vkptvLIG~S~~~g~-----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+++|++|=+.+..+. -+..+++.+.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988776431 1345677776665567887654
No 306
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=67.94 E-value=4.2 Score=38.49 Aligned_cols=30 Identities=20% Similarity=0.401 Sum_probs=23.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
||.|+|+|..|..+|..|. + |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-----~-g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-----R-RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-----T-TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHh-----C-CC-------eEEEEeCC
Confidence 7999999999999998874 2 42 47788864
No 307
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=67.80 E-value=4.3 Score=38.92 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=30.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|++.++|++|+|..|..-++.|+.+ | .++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 58899999999999999999888764 5 468888874
No 308
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=67.78 E-value=19 Score=36.51 Aligned_cols=137 Identities=7% Similarity=0.036 Sum_probs=86.5
Q ss_pred HHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHcCCCCcee--cCccchhHHHHHHHHHHHHHhC------CCCCCce
Q 010939 168 LHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLG------GSLADQR 239 (497)
Q Consensus 168 vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTa~V~lAgll~Al~~~g------~~l~d~r 239 (497)
+.+.++ +-.+| .++ |-+-.++. .+.+.+.+| .++||+| || +-=-+=+||=++.-.+..| ++|++.|
T Consensus 90 l~DTar-vls~~-~D~-iviR~~~~-~~~~~lA~~-~~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~ 163 (328)
T 3grf_A 90 VQDTAE-VFSRM-VDI-CTARLATK-EMMREMAQH-ASVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIK 163 (328)
T ss_dssp HHHHHH-HHTTT-CSE-EEEECSSH-HHHHHHHHH-CSSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCC
T ss_pred HHHHHH-HHHhh-CCE-EEEecCCh-hHHHHHHHh-CCCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcE
Confidence 344444 33456 443 33444433 344455555 3799998 65 4445677888777777766 3799999
Q ss_pred EEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc--c----CCCCCHHHHH
Q 010939 240 FLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE--H----EPVKELVDAV 313 (497)
Q Consensus 240 iv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~--~----~~~~~L~e~v 313 (497)
|.++|-|.- .+|+-++.++.+ .|+ +|.++-.+|+..+-.. .+...-+.++++ . ....++.|+|
T Consensus 164 va~vGD~~~--~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~~-~~~~~~~~~~~~~~~g~~v~~~~d~~eav 232 (328)
T 3grf_A 164 FAYCGDSMN--NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPIK-EVIDECEEIIAKHGTGGSIKIFHDCKKGC 232 (328)
T ss_dssp EEEESCCSS--HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCCH-HHHHHHHHHHHHHTCCCEEEEESSHHHHH
T ss_pred EEEeCCCCc--chHHHHHHHHHH-cCC-------EEEEECChHhhhCCCH-HHHHHHHHHHhhccCCCeEEEEcCHHHHh
Confidence 999999852 588888888766 474 6899999888632111 122222333332 1 1236899999
Q ss_pred hccCCcEEEE
Q 010939 314 NAIKPTILIG 323 (497)
Q Consensus 314 ~~vkptvLIG 323 (497)
++ +||+.-
T Consensus 233 ~~--aDvvyt 240 (328)
T 3grf_A 233 EG--VDVVYT 240 (328)
T ss_dssp TT--CSEEEE
T ss_pred cC--CCEEEe
Confidence 98 999984
No 309
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=67.76 E-value=4.3 Score=40.21 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+.--
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999988865 374 5888988643
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=67.58 E-value=16 Score=36.50 Aligned_cols=93 Identities=22% Similarity=0.320 Sum_probs=55.8
Q ss_pred cCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCcc
Q 010939 211 DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE 290 (497)
Q Consensus 211 DDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~ 290 (497)
++.++.....++..+.+++..+.+ .+++++|.|||..|...+.+... .|. ++++.+|+.
T Consensus 158 ~~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~--------- 216 (370)
T 4ej6_A 158 DPVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ--------- 216 (370)
T ss_dssp CTTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC---------
T ss_pred CHHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC---------
Confidence 445665555667777778766554 46799999998777655444332 374 578877653
Q ss_pred CCchhchhhhcc-------cCCCCCHHHHHhc---c---CCcEEEEccCC
Q 010939 291 SLQHFKKPWAHE-------HEPVKELVDAVNA---I---KPTILIGTSGQ 327 (497)
Q Consensus 291 ~l~~~k~~~a~~-------~~~~~~L~e~v~~---v---kptvLIG~S~~ 327 (497)
+.+..++++ .....++.+.++. . +.|++|=+++.
T Consensus 217 ---~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~ 263 (370)
T 4ej6_A 217 ---ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGV 263 (370)
T ss_dssp ---HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCC
T ss_pred ---HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCC
Confidence 223334432 1112466666664 1 57888877664
No 311
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=67.44 E-value=6 Score=39.92 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=30.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
..+|||+|||.||+..|..|.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999998763 64 1379999987644
No 312
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=67.42 E-value=4.5 Score=41.47 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
..+|||+|||.||+..|..|.+. ..| .+|.++|+..-+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCcc
Confidence 46899999999999999988653 013 579999987543
No 313
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=67.06 E-value=5.5 Score=39.06 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=28.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 45899999999999999998761 151 4799999875
No 314
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=66.68 E-value=6.3 Score=38.83 Aligned_cols=55 Identities=13% Similarity=0.064 Sum_probs=34.7
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 214 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 214 QGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
|+...-.++..+.|++..+. ..++|+|.|||..|...+.++.. .|. ++++.+|+.
T Consensus 147 ~aa~~~~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~ 201 (348)
T 2d8a_A 147 YATLQEPLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS 201 (348)
T ss_dssp HHTTHHHHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC
T ss_pred HHHhhhHHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 44333344445666644333 88999999999888777665543 363 468877753
No 315
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=66.60 E-value=9.5 Score=35.52 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=55.8
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHH
Q 010939 234 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 312 (497)
Q Consensus 234 ~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 312 (497)
.++..||+|.|| |-.|..+++.|.+ .|... ..+.- .+...+ -+-....++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~--------------~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV--------------FVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE--------------ECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc--------------ccCcee----cccCCHHHHHHH
Confidence 467789999996 8888888887764 35300 00000 000000 011112457888
Q ss_pred HhccCCcEEEEccCCCCC-----------------CCHHHHHHHHccCCCceEEecC
Q 010939 313 VNAIKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~-----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
++..++|++|=+.+..+. -|..+++.+.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888899999988776431 1234688887776667888544
No 316
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=66.59 E-value=4.8 Score=41.24 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=27.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
||||+|+|.||+..|..|.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999888543 53 24689998764
No 317
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=66.54 E-value=15 Score=34.14 Aligned_cols=79 Identities=14% Similarity=0.186 Sum_probs=42.6
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHH
Q 010939 231 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELV 310 (497)
Q Consensus 231 ~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~ 310 (497)
...++++.+++|.||++ ||...++..+.+ +| -+++++|++- .+ +.... .+.-+-....++.
T Consensus 9 ~~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 9 AKPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHH
T ss_pred ccccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHH
Confidence 34468888999999743 444444444444 36 3688888752 11 11111 1111111223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 010939 311 DAVNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 311 e~v~~v-----kptvLIG~S~~~ 328 (497)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555543 689999777653
No 318
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=66.53 E-value=8.9 Score=35.98 Aligned_cols=97 Identities=14% Similarity=0.055 Sum_probs=57.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 316 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 316 (497)
||+|.|| |-.|..+++.|.+. .| .++..++++.- +...+.+....+.+ +-....+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6999996 88888888885431 14 46777776521 11111111111211 11222468888886
Q ss_pred CCcEEEEccCCCCC------CCHHHHHHHHccCCCceEEecC
Q 010939 317 KPTILIGTSGQGRT------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 317 kptvLIG~S~~~g~------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
.|++|=+++.... -++.+++.|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999987765321 2467888888777677888544
No 319
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=66.50 E-value=4.8 Score=41.57 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988865 36 4699999864
No 320
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=66.45 E-value=5.5 Score=42.38 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=29.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 363 599999874
No 321
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=66.40 E-value=5 Score=41.31 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 479999986
No 322
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=66.23 E-value=5.4 Score=36.91 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.+|+|+|+|.+|+..|..|.+ .| .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4679999999999999988865 36 468888876
No 323
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=66.23 E-value=5.1 Score=39.56 Aligned_cols=35 Identities=14% Similarity=0.325 Sum_probs=28.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G-------~~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RG-------HRVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCCC
Confidence 579999999999999998865 36 369999987654
No 324
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=66.18 E-value=5.8 Score=40.48 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKRG 39 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 45799999999999999888653 5 4799999873
No 325
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=66.13 E-value=22 Score=37.14 Aligned_cols=124 Identities=19% Similarity=0.246 Sum_probs=0.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhc--------------------hh
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK--------------------KP 298 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k--------------------~~ 298 (497)
||.|+|+|.-|+.+|..|.+. | .+++++|++ ..+-+.++..+ ..
T Consensus 10 ~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~----~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~ 73 (446)
T 4a7p_A 10 RIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD----ARKIELLHQNVMPIYEPGLDALVASNVKAGRLS 73 (446)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----STTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEE
T ss_pred EEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHhcCCCCccCCCHHHHHHhhcccCCEE
Q ss_pred hhcc---------------cCCCCC---------HHHHHhcc-----CCcEEEEccCCCCCCCHHHHHHHHccCCCceEE
Q 010939 299 WAHE---------------HEPVKE---------LVDAVNAI-----KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 349 (497)
Q Consensus 299 ~a~~---------------~~~~~~---------L~e~v~~v-----kptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIF 349 (497)
+..+ +.+... +.++++.+ +.+++|-.||.+--.|+++.+.+.+....-=++
T Consensus 74 ~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~ 153 (446)
T 4a7p_A 74 FTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAK 153 (446)
T ss_dssp EESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCE
T ss_pred EECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCce
Q ss_pred ecCCCCCCCCCCH-HHHhccccCcEEEecCCC
Q 010939 350 SLSNPTSQSECTA-EEAYTWSQGRAIFASGSP 380 (497)
Q Consensus 350 aLSNPt~~~E~~p-eda~~~t~Grai~AsGsP 380 (497)
-+|||...-|-++ +|...-+ +.++++-++
T Consensus 154 v~~~Pe~a~eG~a~~d~~~p~--~ivvG~~~~ 183 (446)
T 4a7p_A 154 VVSNPEFLREGAAIEDFKRPD--RVVVGTEDE 183 (446)
T ss_dssp EEECCCCCCTTSHHHHHHSCS--CEEEECSCH
T ss_pred EEeCcccccccchhhhccCCC--EEEEeCCcH
No 326
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=66.10 E-value=5.7 Score=39.14 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+|+|+|||.||+..|..|... |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988653 64 588888764
No 327
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=66.08 E-value=5 Score=41.46 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|||.||+..|..|.+... .|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~--~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE--KGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH--TTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhh--cCCCC----CcEEEEEcC
Confidence 489999999999999999876321 36420 138899886
No 328
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=66.03 E-value=5.3 Score=46.33 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=34.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357889999999999999999999876 86 899999987
No 329
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=66.00 E-value=19 Score=38.33 Aligned_cols=118 Identities=20% Similarity=0.162 Sum_probs=75.9
Q ss_pred CCCceecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHh
Q 010939 205 THLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 263 (497)
Q Consensus 205 ~~~~FnDDi---QGTa~V~lAgll~Al~~------------------~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~ 263 (497)
.+.+.|--- ..+|=-++|.+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~----- 163 (529)
T 1ygy_A 89 GVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA----- 163 (529)
T ss_dssp TCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh-----
Confidence 455555322 23445577888876653 2467999999999999999999998854
Q ss_pred cCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 010939 264 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 338 (497)
Q Consensus 264 ~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~-~~~~~~L~e~v~~vkptvLIG~S----~~~g~Fteevi~~ 338 (497)
.|+ +++.+|+.- .+ + + +.+ .-...++.|+++. +|+++=.- ...++++++.+..
T Consensus 164 ~G~-------~V~~~d~~~----~~-~-----~---a~~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 FGA-------YVVAYDPYV----SP-A-----R---AAQLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp TTC-------EEEEECTTS----CH-H-----H---HHHHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred CCC-------EEEEECCCC----Ch-h-----H---HHhcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 263 688888742 11 0 0 111 1111378899987 89887442 2235778777766
Q ss_pred HHccCCCceEEecC
Q 010939 339 MASLNEKPIIFSLS 352 (497)
Q Consensus 339 Ma~~~~rPIIFaLS 352 (497)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 63 567887777
No 330
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=65.96 E-value=36 Score=34.68 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=81.9
Q ss_pred HHhhCCCcceeeecCCCCcHHHHHHHHcCCCCcee--cCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHH
Q 010939 176 KQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIA 253 (497)
Q Consensus 176 ~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia 253 (497)
-.+| .++++ +--++ ..+.+.|.+|- ++||+| || .-=-+=+||=++.-.+..| +|++.||+++|-| . -+|
T Consensus 122 Ls~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nva 192 (340)
T 4ep1_A 122 LSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NVC 192 (340)
T ss_dssp HHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HHH
T ss_pred HHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hhH
Confidence 3455 55443 44443 24444555553 699999 54 3334567787777666666 5999999999998 2 388
Q ss_pred HHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc-C---CCCCHHHHHhccCCcEEEEccCC
Q 010939 254 ELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-E---PVKELVDAVNAIKPTILIGTSGQ 327 (497)
Q Consensus 254 ~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~-~---~~~~L~e~v~~vkptvLIG~S~~ 327 (497)
+-++.++.+ .|+ +|.++=.+|+.-.. + +-+.-+.+|+.. . ...++.|+|++ +||+.-..=+
T Consensus 193 ~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 193 HSLLLASAK-VGM-------HMTVATPVGYRPNE--E-IVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHH-cCC-------EEEEECCcccCCCH--H-HHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 888887766 474 68888888774321 1 111122333332 1 23689999998 9999876543
No 331
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=65.92 E-value=7.8 Score=36.00 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=27.2
Q ss_pred CCCCCCceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 232 GGSLADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 232 g~~l~d~riv~~GAG---sAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..++++.++||.||+ -.|.++|+.|.+ +| -+++++|++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecc
Confidence 356889999999984 455566666654 36 368888876
No 332
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=65.44 E-value=5.3 Score=40.03 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=29.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 364 379999987653
No 333
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=65.38 E-value=3.4 Score=39.19 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=26.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
...+|+|+|||.||+..|..|.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 34689999999999999988864 353 57788864
No 334
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=65.36 E-value=6.2 Score=39.44 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=27.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+|+|+|||.+|+..|-.|.+ .| .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 79999999999999998865 36 46888888643
No 335
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=65.34 E-value=8.8 Score=34.94 Aligned_cols=68 Identities=13% Similarity=0.203 Sum_probs=39.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc-
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 316 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v- 316 (497)
+++|.|| |-.|..+++.|.+ .| .+++++|++. . .+.. .+.-+-....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 5566666666654 36 3688888752 1 1111 1111111113466666654
Q ss_pred -CCcEEEEccCCC
Q 010939 317 -KPTILIGTSGQG 328 (497)
Q Consensus 317 -kptvLIG~S~~~ 328 (497)
++|++|=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887754
No 336
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=65.18 E-value=4.5 Score=38.60 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=27.0
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 280 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~ 280 (497)
...+|+|+|||.||+..|..|.+ .|. ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 34689999999999999998865 263 5888997
No 337
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=65.04 E-value=19 Score=31.83 Aligned_cols=93 Identities=9% Similarity=0.137 Sum_probs=52.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 316 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 316 (497)
||+|.|| |-.|..+++.|++ .| .+++.++++. ++.+.+. ....+.. +-....+ ++++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~~~~~~~-~~~~~~~~D~~d~~~--~~~~~- 61 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA----GKITQTH-KDINILQKDIFDLTL--SDLSD- 61 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS----HHHHHHC-SSSEEEECCGGGCCH--HHHTT-
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc----hhhhhcc-CCCeEEeccccChhh--hhhcC-
Confidence 7999996 8888888887765 36 4688887751 1000010 0111111 1011112 66765
Q ss_pred CCcEEEEccCCCCC-------CCHHHHHHHHccCCCceEEecC
Q 010939 317 KPTILIGTSGQGRT-------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 317 kptvLIG~S~~~g~-------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+|++|=+.+.... .+..+++.|.+...+.+||.-|
T Consensus 62 -~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 62 -QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp -CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred -CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 8999987766422 1367788887665556666544
No 338
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=65.00 E-value=9.7 Score=34.43 Aligned_cols=101 Identities=14% Similarity=0.034 Sum_probs=56.3
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHH
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 312 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~ 312 (497)
.+..+|+|.|| |-.|..+++.|++ .|- ..+++.++++. ++.+.+. .+..+.. +-....++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHH
Confidence 34578999996 7777777777754 220 14688887752 1000110 0111111 11122467778
Q ss_pred HhccCCcEEEEccCCCCC----------------C-------------CHHHHHHHHccCCCceEEecC
Q 010939 313 VNAIKPTILIGTSGQGRT----------------F-------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~----------------F-------------teevi~~Ma~~~~rPIIFaLS 352 (497)
++. +|++|=+.+.... | +..+++.|.++.-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 875 8999977664310 1 356778887665566777543
No 339
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=64.99 E-value=12 Score=35.49 Aligned_cols=98 Identities=17% Similarity=0.271 Sum_probs=55.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 316 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 316 (497)
||+|.|| |-.|..+++.|.+ .| -+++.+|+.- ....+.+.+ ...+.. +-....++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 7899987 7777777777654 36 3678887631 111111111 111111 111123577788766
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 317 KPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 317 kptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0235667776655567887644
No 340
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=64.96 E-value=17 Score=34.72 Aligned_cols=97 Identities=20% Similarity=0.174 Sum_probs=54.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhc
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 315 (497)
.||+|.|| |-.|..+++.|.+ .| .+++.+|++. ...+.+...+..+.. +-....++.++++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 48999996 8888888888765 25 4688888752 111112211111211 11122457778875
Q ss_pred cCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCceEEecC
Q 010939 316 IKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 316 vkptvLIG~S~~~g~F--------------teevi~~Ma~~~~rPIIFaLS 352 (497)
+|++|=+.+..+.. +..+++++.++.-+.+||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999887754311 346777777666567887544
No 341
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=64.95 E-value=6.1 Score=39.21 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=26.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+|+|+|||.+|+..|..|.+ .| .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSK-----AG-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHh-----CC-------CceEEEeCCC
Confidence 79999999999999998875 36 4688888863
No 342
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=64.92 E-value=5.1 Score=41.18 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G-------~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RG-------RRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEeCCCC
Confidence 4589999999999999988765 36 46999998754
No 343
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=64.90 E-value=4.9 Score=41.49 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=28.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 35689999999999999998865 26 4799999863
No 344
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=64.63 E-value=6.5 Score=36.83 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=23.5
Q ss_pred CCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|++.+++|.||+ -.|..+|+.|. + +| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~----~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAV----A-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHH----H-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH----H-CC-------CEEEEEeCC
Confidence 4778899999984 34444555443 3 36 368888875
No 345
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=64.54 E-value=9.9 Score=34.90 Aligned_cols=101 Identities=19% Similarity=0.167 Sum_probs=55.7
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHH
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 312 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~ 312 (497)
..-.+|+|.|| |-.|..+++.|++ .|- -++++++++.- +...+...+..+.+ +-....++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQPA----KIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSGG----GSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcChh----hhcccccCCcEEEEecCCCHHHHHHH
Confidence 44568999995 7777777777654 241 36777777521 11111111111111 11222467788
Q ss_pred HhccCCcEEEEccCCCCC--CCHHHHHHHHccCCCceEEecC
Q 010939 313 VNAIKPTILIGTSGQGRT--FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~--Fteevi~~Ma~~~~rPIIFaLS 352 (497)
++. .|++|=..+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 886 7999966554322 2566788887655455666444
No 346
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=64.35 E-value=4.8 Score=41.40 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
++.++||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35689999999999999998854 35 4799999874
No 347
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=64.19 E-value=7 Score=38.97 Aligned_cols=88 Identities=14% Similarity=0.162 Sum_probs=53.0
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc-CCCCCHHHHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKELVDAV 313 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~-~~~~~L~e~v 313 (497)
|+..||.|+|+|.-|..+|..|.. .|. +++++|+.. .+ . ...++.. -...++.|++
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~-----~G~-------~V~~~~~~~----~~--~-----~~~a~~~G~~~~~~~e~~ 70 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKD-----SGV-------DVTVGLRSG----SA--T-----VAKAEAHGLKVADVKTAV 70 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECCTT----CH--H-----HHHHHHTTCEEECHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHH-----CcC-------EEEEEECCh----HH--H-----HHHHHHCCCEEccHHHHH
Confidence 345689999999999999988865 363 577777642 10 0 0111110 0112788888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHH-HHHccC-CCceEE
Q 010939 314 NAIKPTILIGTSGQGRTFTKEVVE-AMASLN-EKPIIF 349 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g~Fteevi~-~Ma~~~-~rPIIF 349 (497)
+. +|++| ++.+... .+++++ .+..+. +..+|.
T Consensus 71 ~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 71 AA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred hc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 76 88887 5554433 377887 766543 233444
No 348
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=63.97 E-value=5.6 Score=41.71 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=28.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999988653 5 4699999875
No 349
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=63.89 E-value=6 Score=40.49 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 4589999999999999987765 36 4799999873
No 350
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=63.78 E-value=9.2 Score=36.23 Aligned_cols=77 Identities=10% Similarity=0.170 Sum_probs=42.6
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-------ccC
Q 010939 233 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-------EHE 304 (497)
Q Consensus 233 ~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-------~~~ 304 (497)
.+|+++++||.||++ .|.++|+.| .+ +| -+++++|++- . .+......+.. +-.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l----~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVL----AR-AG-------ARVVLADLPE----T---DLAGAAASVGRGAVHHVVDLT 67 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHH----HH-TT-------CEEEEEECTT----S---CHHHHHHHHCTTCEEEECCTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHH----HH-CC-------CEEEEEcCCH----H---HHHHHHHHhCCCeEEEECCCC
Confidence 468889999999853 344444444 43 36 3688888751 1 12222211110 111
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 010939 305 PVKELVDAVNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 305 ~~~~L~e~v~~v-----kptvLIG~S~~~ 328 (497)
...++.++++.+ +.|+||=..+..
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 223455666544 799999776653
No 351
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=63.67 E-value=21 Score=32.70 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=24.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..|++.+++|.||++ ||...++..+.+ +| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 333344444444 36 368888875
No 352
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=63.65 E-value=7.9 Score=36.11 Aligned_cols=36 Identities=28% Similarity=0.395 Sum_probs=23.1
Q ss_pred CCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|++.+++|.||+ -.|..+|+.|. + +| -+++++|++
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~----~-~G-------~~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLA----R-AG-------ANIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHH----H-TT-------CEEEEECSS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH----H-CC-------CEEEEEeCC
Confidence 3677899999984 34444555444 3 36 368888775
No 353
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=63.61 E-value=5.5 Score=42.42 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=28.9
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999998865 363 799999864
No 354
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=63.60 E-value=11 Score=37.08 Aligned_cols=60 Identities=15% Similarity=0.093 Sum_probs=38.4
Q ss_pred ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 210 NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 210 nDDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
-|+.++.....++..+.|++..+.+ .+++|+|+|||..|...+.+.. + .|. ++++.+|+.
T Consensus 154 ~s~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~~ 213 (363)
T 3m6i_A 154 MSYENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDID 213 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEESC
T ss_pred CCHHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECCC
Confidence 3455555554566667777666544 4679999999877766554443 2 374 568877753
No 355
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=63.51 E-value=8.3 Score=40.91 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=21.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
++++.+++|.|||.+|.++|..|.+. |. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~-----G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEK-----GA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHH-----CC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 57788999999996666666666542 62 57888774
No 356
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=63.51 E-value=6 Score=37.62 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=25.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
--|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----AN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 458999999999999877654 36 468889874
No 357
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=63.29 E-value=13 Score=36.63 Aligned_cols=55 Identities=20% Similarity=0.167 Sum_probs=34.0
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 010939 214 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 280 (497)
Q Consensus 214 QGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~ 280 (497)
++.....++..+.|++..+.+ ..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 150 ~aa~~~~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 150 EGALIEPLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHhhchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 443333445556667655443 46799999999777666554432 363 57888875
No 358
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=63.20 E-value=8.9 Score=39.01 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|||+|||.||+..|..|.+. +- ..++.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCC
Confidence 46899999999999999988653 21 14788888875
No 359
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=63.06 E-value=6.5 Score=39.77 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+|||+|||.||+..|..|.+. . .| .++.++|++-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999988762 0 13 4788888864
No 360
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=62.86 E-value=6.3 Score=40.05 Aligned_cols=36 Identities=19% Similarity=0.364 Sum_probs=28.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+|||+|||.||+..|..|...+. .| -++.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999976431 13 4688888764
No 361
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=62.65 E-value=6.4 Score=40.16 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=27.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999987764 25 4799999873
No 362
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=62.63 E-value=3.7 Score=43.19 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=25.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.||||+|+|.||+..|+.|.. .+ -+|.+||++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999998876631 12 379999986
No 363
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=62.54 E-value=7.8 Score=42.23 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|||+|||.||+..|..|.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 35899999999999999998763 6 4699999863
No 364
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=62.40 E-value=6.9 Score=36.42 Aligned_cols=77 Identities=29% Similarity=0.371 Sum_probs=43.5
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-------ccC
Q 010939 233 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-------EHE 304 (497)
Q Consensus 233 ~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-------~~~ 304 (497)
.++++.+++|.||++ .|..+|+.|. + +| -+++++|++- +.+...+..+.. +-.
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~----~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFA----K-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH----H-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHH----H-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467888999999864 3445555554 3 36 3688888751 112221111110 111
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCC
Q 010939 305 PVKELVDAVNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 305 ~~~~L~e~v~~v-----kptvLIG~S~~~ 328 (497)
...++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 223566666655 799999776653
No 365
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=62.35 E-value=6.1 Score=37.29 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=25.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|||.||+..|..+.+ .|. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988764 353 57777754
No 366
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=62.31 E-value=8.7 Score=36.00 Aligned_cols=87 Identities=21% Similarity=0.284 Sum_probs=55.1
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHH
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 313 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v 313 (497)
-...||+|.|| |-.|..+++.|.+ .| .+++.+|++ ..+ +.+ ..++.+++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~d-----------~~~~~~~~ 59 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-ITN-----------VLAVNKFF 59 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TTC-----------HHHHHHHH
T ss_pred cccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CCC-----------HHHHHHHH
Confidence 34668999987 7777777777654 35 368888875 111 221 13467777
Q ss_pred hccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 314 NAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+.+++|++|=+.+.... -+..+++.+.+..- .|||.=|
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 76679999988775431 03456777766554 7888655
No 367
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=62.30 E-value=24 Score=34.75 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=57.2
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHH
Q 010939 236 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAV 313 (497)
Q Consensus 236 ~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v 313 (497)
+..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+...+..+.. +-....++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 8888888877765 25 4688888752 110111111111111 111224577778
Q ss_pred hccCCcEEEEccCCCCC--C---------------CHHHHHHHHccCCCceEEecC
Q 010939 314 NAIKPTILIGTSGQGRT--F---------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g~--F---------------teevi~~Ma~~~~rPIIFaLS 352 (497)
+ ++|++|=+.+.... + +..+++.+.++.-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 7 49999988775432 1 235667776655567887544
No 368
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=62.15 E-value=5.2 Score=40.99 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4589999999999999988864 25 479999986
No 369
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=62.08 E-value=8.2 Score=40.18 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=26.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 279 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD 279 (497)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999998761 16 4799999
No 370
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=61.85 E-value=9.6 Score=36.75 Aligned_cols=101 Identities=12% Similarity=0.162 Sum_probs=60.4
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhc----------hhhhc-c
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK----------KPWAH-E 302 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k----------~~~a~-~ 302 (497)
++..||+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+ ..+.+ +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45679999996 8888888888765 36 46888887521 1101111110 01111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 303 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 303 ~~~~~~L~e~v~~vkptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
-....++.++++ ++|++|=+.+.... -+..+++.+.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 112245777787 59999988875321 1234788888777678888643
No 371
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=61.69 E-value=5.4 Score=40.40 Aligned_cols=39 Identities=13% Similarity=0.212 Sum_probs=29.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhc-CeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETR-KKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~-~~i~~vD~~GL 283 (497)
..+|||+|||.||+..|..|.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 34799999999999999998764 31 000 47899998753
No 372
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=61.65 E-value=7.7 Score=39.41 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=19.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHH
Q 010939 237 DQRFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~ 259 (497)
+..|+|+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45699999999999999988653
No 373
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=61.40 E-value=5.2 Score=40.97 Aligned_cols=30 Identities=23% Similarity=0.461 Sum_probs=24.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
||.|+|+|.-|..+|..|.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 4 468888874
No 374
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=61.37 E-value=7.1 Score=36.36 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=54.9
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 316 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 316 (497)
||+|.|| |-.|..+++.|.+. ..| -+++.++++. .+.+.+.+....+.. +-....++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 87888787777531 003 3688887741 110101111111111 11122467788876
Q ss_pred CCcEEEEccCCCC----CCCHHHHHHHHccCCCceEEecC
Q 010939 317 KPTILIGTSGQGR----TFTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 317 kptvLIG~S~~~g----~Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+|++|=+++... ..+..+++.|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998776421 24678889888776667887544
No 375
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=61.33 E-value=6 Score=40.48 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LG-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4589999999999999987754 36 369999986
No 376
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=61.30 E-value=6.7 Score=39.52 Aligned_cols=34 Identities=24% Similarity=0.524 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999988864 25 5789998863
No 377
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=61.28 E-value=56 Score=32.72 Aligned_cols=135 Identities=12% Similarity=0.158 Sum_probs=83.5
Q ss_pred HHHHHHHHHHhhCCCcceeeecCCCCcHHHHHHHHcCCCCcee--cCccchhHHHHHHHHHHHHHhCCCCC-CceEEEeC
Q 010939 168 LHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLA-DQRFLFLG 244 (497)
Q Consensus 168 vdefv~av~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTa~V~lAgll~Al~~~g~~l~-d~riv~~G 244 (497)
+.+.++.+ .+| .++ |-+-.++ ..+.+.|.+|- ++||+| || +-=-+=+||=++.-.+..| +|+ +.||+++|
T Consensus 81 l~DTarvl-s~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g-~l~~gl~va~vG 153 (307)
T 3tpf_A 81 VKDTARVI-GAM-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWNK-MQNGIAKVAFIG 153 (307)
T ss_dssp HHHHHHHH-HHH-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTTC-CGGGCCEEEEES
T ss_pred HHHHHHHH-HHh-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHhC-CCCCCCEEEEEc
Confidence 34444433 445 443 3344443 34445555554 699998 55 4444567777776555554 799 99999999
Q ss_pred cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc----CCCCCHHHHHhccCCcE
Q 010939 245 AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELVDAVNAIKPTI 320 (497)
Q Consensus 245 AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~e~v~~vkptv 320 (497)
-|. -+|+-++.++.+ .|+ +|.++-.+|+.-.. .+-...+.+|+.. ....++.|+|++ +||
T Consensus 154 D~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDv 217 (307)
T 3tpf_A 154 DSN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDV 217 (307)
T ss_dssp CSS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSE
T ss_pred CCC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCE
Confidence 974 488888888766 474 68888888774321 1111122333332 123689999998 999
Q ss_pred EEEcc
Q 010939 321 LIGTS 325 (497)
Q Consensus 321 LIG~S 325 (497)
+.-..
T Consensus 218 vyt~~ 222 (307)
T 3tpf_A 218 VITDT 222 (307)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98654
No 378
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=61.23 E-value=5.5 Score=38.36 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=27.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45689999999999999998865 363 57888864
No 379
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=61.13 E-value=6.8 Score=40.16 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.++||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQ-----LG-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 3579999999999999988865 26 4799999874
No 380
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=61.13 E-value=7.1 Score=36.44 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=23.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|++.+++|.||++ ||...++..+.+ +| -+++++|++
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EG-------AKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEECSC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57888999999743 333444444444 36 368888764
No 381
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=61.06 E-value=11 Score=38.03 Aligned_cols=88 Identities=9% Similarity=0.130 Sum_probs=51.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhccc--CCCCCHHHHHhc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~--~~~~~L~e~v~~ 315 (497)
.||.|+|+|.-|..+|..|... | .+++.+|++- +.+ ..+... ....++.|+++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~-----~~a~~~G~~~~~~~~e~~~~ 64 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGA-----KSAVDEGFDVSADLEATLQR 64 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHH-----HHHHHTTCCEESCHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHH-----HHHHHcCCeeeCCHHHHHHh
Confidence 4899999999999999988753 5 3688888741 111 111110 112566666654
Q ss_pred c--CCcEEEEccCCCCCCCHHHHHHHHccCCCceEEec
Q 010939 316 I--KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSL 351 (497)
Q Consensus 316 v--kptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaL 351 (497)
. ++|++| ++.+.. -++++++.++.+.+.-||.=.
T Consensus 65 a~~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv 100 (341)
T 3ktd_A 65 AAAEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDV 100 (341)
T ss_dssp HHHTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEEC
T ss_pred cccCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEc
Confidence 2 367666 444432 456777776655444454433
No 382
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=60.96 E-value=7.3 Score=36.78 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=57.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhc
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 315 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~ 315 (497)
.||+|.|| |-.|..+++.|++. ..| .+++.+|+.. .... +.+ +..+.. +-....++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKL---YGT-------ENVIASDIRK----LNTD-VVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHH---HCG-------GGEEEEESCC----CSCH-HHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHh---CCC-------CEEEEEcCCC----cccc-ccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 88888888887652 013 4688887641 1100 100 111111 11122467788886
Q ss_pred cCCcEEEEccCCCCC---------------CCHHHHHHHHccCCCceEEecC
Q 010939 316 IKPTILIGTSGQGRT---------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 316 vkptvLIG~S~~~g~---------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
.++|++|=+.+.... -+..+++.+.++.-+.+||.=|
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 689999988775321 1235677777655567777533
No 383
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=60.96 E-value=23 Score=34.36 Aligned_cols=108 Identities=21% Similarity=0.241 Sum_probs=57.3
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCccc---CCCccCCchh------chhhhc-
Q 010939 233 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV---SSRLESLQHF------KKPWAH- 301 (497)
Q Consensus 233 ~~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~---~~r~~~l~~~------k~~~a~- 301 (497)
.+++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..--. ..+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 77777777777651 014 4788888753200 0000011111 111111
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCceEEecC
Q 010939 302 EHEPVKELVDAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 302 ~~~~~~~L~e~v~~vkptvLIG~S~~~g~--------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+-....++.++ ...++|++|=+.+.... -|..+++.+.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 00111245454 33479999977764321 123567777666555 888665
No 384
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.88 E-value=6.6 Score=40.82 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999998865 25 4799999874
No 385
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=60.87 E-value=8.6 Score=39.17 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=29.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
..+|||+|||.||+..|..|.+ .|. ..++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 4689999999999999998865 364 237999998643
No 386
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=60.84 E-value=24 Score=32.76 Aligned_cols=76 Identities=13% Similarity=0.177 Sum_probs=39.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhh------hc-ccCCC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------AH-EHEPV 306 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~------a~-~~~~~ 306 (497)
+|++.+++|.||++ ||...++..+.+ +| -+++++|++- .+ +......+ .. +-...
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLKP----PA---GEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHHHHHhCCceEEEEccCCCH
Confidence 57888999999853 333344444444 36 3688888752 11 11111111 11 11122
Q ss_pred CCHHHHHhcc-----CCcEEEEccCC
Q 010939 307 KELVDAVNAI-----KPTILIGTSGQ 327 (497)
Q Consensus 307 ~~L~e~v~~v-----kptvLIG~S~~ 327 (497)
.++.++++.+ +.|+||=..+.
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3455666544 79999976654
No 387
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=60.82 E-value=5.9 Score=40.93 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
.+|||+|||.||+..|-.|..... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999999876421 25 37899998754
No 388
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=60.78 E-value=6.6 Score=36.73 Aligned_cols=84 Identities=21% Similarity=0.405 Sum_probs=55.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhcc
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 316 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~v 316 (497)
.||+|.|| |-.|..+++.|.+ .| -+++.+|+. .. ++.+ ..++.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~d-----------~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DITN-----------ISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTTC-----------HHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCCC-----------HHHHHHHHHhc
Confidence 38999996 8888888777754 25 478888872 11 1221 13577788877
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 317 KPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 317 kptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
++|++|=+.+.... -+..+++.+.++.-| +||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 89999987775431 034577777766554 887654
No 389
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.71 E-value=6.4 Score=40.13 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999988764 35 479999986
No 390
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=60.69 E-value=5.4 Score=39.42 Aligned_cols=36 Identities=31% Similarity=0.430 Sum_probs=30.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57899999999999999999999764 5 468888875
No 391
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=60.67 E-value=5.2 Score=38.79 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|||.+|+.+|..|.+.. ..| -++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999999886410 024 378899976
No 392
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=60.66 E-value=5 Score=38.04 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=58.3
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCc--cCCchhchhhhc-ccCCCCCHHHH
Q 010939 237 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL--ESLQHFKKPWAH-EHEPVKELVDA 312 (497)
Q Consensus 237 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~--~~l~~~k~~~a~-~~~~~~~L~e~ 312 (497)
..+|+|.|| |.-|..+++.|++. | ..++..++++. ... ..+......+.+ +-....+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888888653 4 13677777751 110 001111111111 11122468888
Q ss_pred HhccCCcEEEEccCCCCC--------CCHHHHHHHHccCCCceEEecCC
Q 010939 313 VNAIKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~--------Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
+++ +|++|-+++.... .+..+++.|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 886 8999987653211 2456778887766667888 664
No 393
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=60.61 E-value=13 Score=36.69 Aligned_cols=103 Identities=14% Similarity=0.190 Sum_probs=57.9
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc-hhchhhhc-ccCCCCCHH
Q 010939 234 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAH-EHEPVKELV 310 (497)
Q Consensus 234 ~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~-~~k~~~a~-~~~~~~~L~ 310 (497)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+.. ....+.+. ..+..+.. +-....++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~---~~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLL---SAEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCT---TCCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCC---CCchhhccCCCceEEEECCCCCHHHHH
Confidence 366679999997 8888888887765 251 4688888752 11001121 01111111 111113455
Q ss_pred HHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcc-CCCceEEecC
Q 010939 311 DAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASL-NEKPIIFSLS 352 (497)
Q Consensus 311 e~v~~vkptvLIG~S~~~g~----------------Fteevi~~Ma~~-~~rPIIFaLS 352 (497)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 59999988775421 134566777655 4456887544
No 394
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=60.60 E-value=6.2 Score=40.77 Aligned_cols=65 Identities=14% Similarity=0.195 Sum_probs=29.1
Q ss_pred ecCccchhHHHHHHHHHHHHH---hCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 210 NDDIQGTASVVLAGLISAMKF---LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 210 nDDiQGTa~V~lAgll~Al~~---~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
|...||-|+++.---+.--.. ...+....+|||+|||.||+..|..|.+.. .| .++.++|+....
T Consensus 6 ~~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 6 HHHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -------------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 334567666655444332211 111122358999999999999999886530 13 579999987543
No 395
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=60.43 E-value=9.4 Score=39.87 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=28.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
.||||+|||.||+..|..|.+. |- ..+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2579999987543
No 396
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=60.42 E-value=7.9 Score=40.46 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=29.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
...+|+|+|||.||+..|..|.. .| .++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G-------~~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LG-------ARVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CC-------CeEEEEEecccc
Confidence 35689999999999999988865 36 478999987544
No 397
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=60.30 E-value=7.5 Score=40.66 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=28.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+.+|+|+|||.+|+..|-.|.. .|+ ++.++|+.-
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~~ 45 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQLP 45 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 56799999999999999988865 375 577788653
No 398
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=60.21 E-value=19 Score=35.83 Aligned_cols=50 Identities=14% Similarity=0.225 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 220 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 220 ~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+....+.+++..+....+++++|.|||..|...+.++.. .| -+++.+|+.
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~G-------a~Vi~~~~~ 220 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FG-------SKVTVISTS 220 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 334445677766655478899999999877776655532 36 257777753
No 399
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=60.17 E-value=7.4 Score=40.47 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=28.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+..|+|+|||.+|+++|..|.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 374 589999864
No 400
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=60.06 E-value=9.5 Score=39.91 Aligned_cols=38 Identities=21% Similarity=0.363 Sum_probs=29.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
..+|||+|||.||+..|-.|..... .| -++.++|+.-+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCCC
Confidence 4689999999999999998865310 25 47999998643
No 401
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=60.03 E-value=8.5 Score=39.38 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+..++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35799999999999999888653 6 478999986
No 402
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=60.01 E-value=11 Score=39.97 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=30.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
...+|||+|||.||+..|..|.+. ..| .++.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCCc
Confidence 457999999999999999988653 013 579999987643
No 403
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=59.94 E-value=8 Score=40.78 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=29.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
..+|||+|||.||+..|..|..... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4589999999999999998876320 24 47999998654
No 404
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=59.94 E-value=8.2 Score=39.80 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+..++|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LG-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----Cc-------CEEEEEeCC
Confidence 4689999999999999988865 36 479999984
No 405
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=59.69 E-value=9.1 Score=39.82 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=29.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999988653 21 258999998753
No 406
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=59.52 E-value=6.5 Score=37.04 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=24.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 69999999999998876654 363 57888875
No 407
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=59.31 E-value=8.2 Score=39.59 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=28.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+..++|+|||.||+..|..+.+ .| .++.++|+++-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCCC
Confidence 3579999999999999988864 36 47999996653
No 408
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=59.29 E-value=15 Score=33.01 Aligned_cols=94 Identities=16% Similarity=0.255 Sum_probs=51.7
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCC-CCCHHHHHhc
Q 010939 239 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEP-VKELVDAVNA 315 (497)
Q Consensus 239 riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~-~~~L~e~v~~ 315 (497)
||+|.| +|-.|..+++.|++ .| -+++.++++.- +...+ .+..+.+ +-.. ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 789999 46667666666653 35 47888887621 11111 1111111 1112 2356666765
Q ss_pred cCCcEEEEccCCCCC--------CCHHHHHHHHccCCCceEEecC
Q 010939 316 IKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 316 vkptvLIG~S~~~g~--------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999977765421 1456777776554445555433
No 409
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=59.09 E-value=9.2 Score=39.37 Aligned_cols=31 Identities=23% Similarity=0.306 Sum_probs=26.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
||.|+|+|.-|..+|..|.+. | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----G-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 799999999999999988753 6 368888874
No 410
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=58.99 E-value=7.2 Score=39.67 Aligned_cols=32 Identities=19% Similarity=0.397 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~-----~G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ-----HDV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEcCC
Confidence 589999999999999988865 374 78889875
No 411
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=58.99 E-value=8.7 Score=37.99 Aligned_cols=34 Identities=26% Similarity=0.357 Sum_probs=25.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+|+|+|||.||+..|-.|.+. ..| .++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G-------~~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPL-------WAIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTT-------SEEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCC-------CCEEEEECCC
Confidence 699999999999999888652 015 3677888753
No 412
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=58.78 E-value=27 Score=33.86 Aligned_cols=57 Identities=16% Similarity=0.198 Sum_probs=33.7
Q ss_pred CccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 010939 212 DIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 280 (497)
Q Consensus 212 DiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~ 280 (497)
+.++...-.++..+.+.+..+. -.++++++.|||..|...+.++ .+ .|. +.++.+|+
T Consensus 137 ~~~aa~l~~~~~~~~~~~~~~~-~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 137 IEDGAFIEPITVGLHAFHLAQG-CENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGGGHHHHHHHHHHHHHTTC-CTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHHHhchHHHHHHHHHHHhcc-CCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 3455444444444555555544 4678999999998876554333 32 364 56666665
No 413
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.75 E-value=8.2 Score=39.58 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 35799999999999999877653 5 479999984
No 414
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=58.70 E-value=12 Score=36.13 Aligned_cols=101 Identities=12% Similarity=0.193 Sum_probs=58.2
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhch----------hhhc-c
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAH-E 302 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~----------~~a~-~ 302 (497)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 45679999998 8888888877765 25 3688888752 111011111111 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 303 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 303 ~~~~~~L~e~v~~vkptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
-....++.++++ ++|++|=+.+..+. -+..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 111235777777 59999988876431 1245667776655556887544
No 415
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=58.60 E-value=33 Score=32.56 Aligned_cols=77 Identities=19% Similarity=0.290 Sum_probs=43.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc----------cc
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------EH 303 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~----------~~ 303 (497)
+|++.++||.||++ ||...++..+.+ +| -+++++|++ . +.+......+.. +-
T Consensus 29 ~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~Dl 90 (276)
T 3r1i_A 29 DLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCDV 90 (276)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECCT
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcCC
Confidence 58889999999854 333444444444 36 368888874 1 123222222221 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCCC
Q 010939 304 EPVKELVDAVNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 304 ~~~~~L~e~v~~v-----kptvLIG~S~~~ 328 (497)
....++.++++.+ ++|+||=..+..
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 91 TQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1123566666655 799999776653
No 416
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=58.59 E-value=9 Score=40.32 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=28.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45689999999999999998875 364 688999864
No 417
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=58.46 E-value=18 Score=35.41 Aligned_cols=86 Identities=19% Similarity=0.086 Sum_probs=55.0
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhc
Q 010939 237 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 315 (497)
Q Consensus 237 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 315 (497)
+.||+++|+ |.-|--+++.+.+. |. +-++.+|.+.- +. + .+ ..+-..|+.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 469999999 98887776665442 53 35677777411 01 1 01 11123678898885
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCCceE
Q 010939 316 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPII 348 (497)
Q Consensus 316 vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPII 348 (497)
.++|+.|= .+++ -+..+++++..+...+.+|
T Consensus 63 ~~~D~viI-~tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVI-YVPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEE-CCCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEE-ecCH-HHHHHHHHHHHHCCCCEEE
Confidence 56998884 3433 5888999998887766633
No 418
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=58.38 E-value=9.2 Score=39.13 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=28.8
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
-...+|+|+|||.||+..|..|.+. | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999988653 6 478888886
No 419
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=58.37 E-value=8.5 Score=35.29 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=25.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.++++.+++|.||.. ||...++..+.+ +| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999743 444455555544 36 368888875
No 420
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=58.22 E-value=9.7 Score=39.38 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=29.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999998764 20 125799999875
No 421
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=58.17 E-value=8.8 Score=39.14 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
.+|||+|||.||+..|..|.+. ..| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCC
Confidence 4899999999999999998763 013 57999998753
No 422
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=58.01 E-value=26 Score=34.27 Aligned_cols=79 Identities=20% Similarity=0.338 Sum_probs=51.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhccC
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 317 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~vk 317 (497)
||+|.|| |-.|-.+++.|++. |. -+++.+|+. ....+|.+++++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999994 88888888888753 52 267777664 111346677775
Q ss_pred CcEEEEccCCCCC------------CCHHHHHHHHccCCC-ceEEecC
Q 010939 318 PTILIGTSGQGRT------------FTKEVVEAMASLNEK-PIIFSLS 352 (497)
Q Consensus 318 ptvLIG~S~~~g~------------Fteevi~~Ma~~~~r-PIIFaLS 352 (497)
+|++|=+.+..+. .+..+++.+.+...+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 8999866554211 245688888766554 6777544
No 423
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=57.91 E-value=8.8 Score=40.14 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=28.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.-++.+|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3456789999999999999988865 375 47777765
No 424
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=57.74 E-value=7.9 Score=38.44 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=27.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+.++||+|||.||+..|..|.+ .|. .-++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3579999999999999988854 363 2368888865
No 425
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=57.73 E-value=83 Score=31.52 Aligned_cols=129 Identities=15% Similarity=0.193 Sum_probs=82.2
Q ss_pred HHhhCCCcceeeecCCCCcHHHHHHHHcCCCCcee--cCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHH
Q 010939 176 KQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIA 253 (497)
Q Consensus 176 ~~~fGp~~lI~~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTa~V~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia 253 (497)
-.+| .++ |-+-.++. .+.+.+.+|-.++||+| |..+-=-+=+||=++.-.+..| +|++.||+++|-|.=+ -+|
T Consensus 95 ls~~-~D~-iviR~~~~-~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~~-rva 169 (310)
T 3csu_A 95 ISTY-VDA-IVMRHPQE-GAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYG-RTV 169 (310)
T ss_dssp HTTT-CSE-EEEEESST-THHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTC-HHH
T ss_pred HHHh-CCE-EEEECCCh-hHHHHHHHhcCCCCEEcCccCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC-chH
Confidence 3456 443 44555654 45566677765799999 4223333456777777666655 7999999999997421 367
Q ss_pred HHHHHHHHHhc-CCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccC----CCCCHHHHHhccCCcEEEEccC
Q 010939 254 ELIALEISKQT-NMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE----PVKELVDAVNAIKPTILIGTSG 326 (497)
Q Consensus 254 ~ll~~~~~~~~-G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~----~~~~L~e~v~~vkptvLIG~S~ 326 (497)
+-++.++.+ . |+ +|.++-.+|+--. +.-..+++... ...++.|++++ +||+.-..-
T Consensus 170 ~Sl~~~~~~-~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~ 230 (310)
T 3csu_A 170 HSLTQALAK-FDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTRV 230 (310)
T ss_dssp HHHHHHHHT-SSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC-
T ss_pred HHHHHHHHh-CCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCc
Confidence 777777765 4 64 6888888877332 22223333221 23689999998 999997643
No 426
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=57.69 E-value=9.2 Score=39.16 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LG-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 3579999999999999998865 36 3799999854
No 427
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=57.68 E-value=9.6 Score=38.18 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=27.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..|+|+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 58999999999999999886520 05 4699999863
No 428
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=57.58 E-value=7.4 Score=41.34 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 4689999999999999988862 1363 799999864
No 429
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=57.58 E-value=9.7 Score=36.14 Aligned_cols=100 Identities=14% Similarity=0.207 Sum_probs=55.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc------ccCCCCCHHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EHEPVKELVD 311 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~------~~~~~~~L~e 311 (497)
.||.|+|+|.-|..+|..|... | .+++++|++.- +.+.+......... ......+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999888653 5 37888887521 00001100000000 0000112222
Q ss_pred HHhcc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCceEEecCCCC
Q 010939 312 AVNAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 355 (497)
Q Consensus 312 ~v~~v-kptvLIG~S~~~g~Fteevi~~Ma~~~-~rPIIFaLSNPt 355 (497)
+.+.+ ++|++| ++..+. ..+++++.++.+. +..+|..++|..
T Consensus 68 ~~~~~~~~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~iv~~~~g~ 111 (316)
T 2ew2_A 68 IDHQNEQVDLII-ALTKAQ-QLDAMFKAIQPMITEKTYVLCLLNGL 111 (316)
T ss_dssp CCTTSCCCSEEE-ECSCHH-HHHHHHHHHGGGCCTTCEEEECCSSS
T ss_pred hcccCCCCCEEE-EEeccc-cHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 22211 378777 333332 4688888887654 467888899865
No 430
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=57.55 E-value=16 Score=33.47 Aligned_cols=36 Identities=22% Similarity=0.310 Sum_probs=23.3
Q ss_pred CCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
++++.+++|.||+ -.|..+++.| .+ .| -+++++|++
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l----~~-~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITF----AT-AG-------ASVVVSDIN 44 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHH----HT-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCccHHHHHHHHHH----HH-CC-------CEEEEEcCC
Confidence 5778899999973 3344444444 43 36 368888875
No 431
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=57.32 E-value=22 Score=33.56 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=49.7
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHHhc
Q 010939 237 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 315 (497)
Q Consensus 237 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v~~ 315 (497)
+.+|+|.|| |-.|..+++.|.+ .| -+++.+|+. +.. + . .+.-+-....++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 8888888877764 35 368877753 101 0 1 111121223567788887
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 316 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 316 vkptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
.++|++|=+.+.... -+..+++.+.+... .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999987765321 02456777766543 6777544
No 432
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=57.28 E-value=63 Score=33.15 Aligned_cols=116 Identities=14% Similarity=0.176 Sum_probs=78.7
Q ss_pred CCcHHHHHHHHcCCCCcee--cCccchhHHHHHHHHHHHHHhCCC-CCCce--EEEeCc----ChHHHHHHHHHHHHHHH
Q 010939 192 NHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGS-LADQR--FLFLGA----GEAGTGIAELIALEISK 262 (497)
Q Consensus 192 ~~~af~iL~ryr~~~~~Fn--DDiQGTa~V~lAgll~Al~~~g~~-l~d~r--iv~~GA----GsAg~Gia~ll~~~~~~ 262 (497)
...+.+.+.+|- ++||+| ||. =-+=+||=++.-.+..|++ |++.| |.++|- | --+|+-++.++.+
T Consensus 145 ~~~~~~~lA~~~-~vPVINag~g~--HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~---nrva~Sl~~~~~~ 218 (359)
T 1zq6_A 145 EDQVLKSFAKYS-PVPVINMETIT--HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLN---TAVANSALTIATR 218 (359)
T ss_dssp TCHHHHHHHHHC-SSCEEESSSSC--CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCC---SHHHHHHHHHHHH
T ss_pred chHHHHHHHHhC-CCCEEeCCCCC--CcHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccc---cchHHHHHHHHHH
Confidence 345566666764 799999 777 4556788888877777765 99999 889998 6 3677777777766
Q ss_pred hcCCChhhhcCeEEEEccC-CcccCCCccCCchhchhhhccc----CCCCCHHHHHhccCCcEEEEccC
Q 010939 263 QTNMPLEETRKKIWLVDSK-GLIVSSRLESLQHFKKPWAHEH----EPVKELVDAVNAIKPTILIGTSG 326 (497)
Q Consensus 263 ~~G~s~eeA~~~i~~vD~~-GLi~~~r~~~l~~~k~~~a~~~----~~~~~L~e~v~~vkptvLIG~S~ 326 (497)
.|+ +|.++-.+ |+.-.. + +-..-+.+|+.. ....++.|+|++ +||+.-..=
T Consensus 219 -~G~-------~v~~~~P~~~~~~~~--~-~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvVyt~~w 274 (359)
T 1zq6_A 219 -MGM-------DVTLLCPTPDYILDE--R-YMDWAAQNVAESGGSLQVSHDIDSAYAG--ADVVYAKSW 274 (359)
T ss_dssp -TTC-------EEEEECSSGGGCCCH--H-HHHHHHHHHHHHSCEEEEECCHHHHHTT--CSEEEEECC
T ss_pred -cCC-------EEEEEcCccccCCCH--H-HHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEEECCc
Confidence 474 68888888 774321 1 111112333332 123689999998 999987653
No 433
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=56.96 E-value=22 Score=33.83 Aligned_cols=104 Identities=14% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCc----hhchhhhc-ccCCCCC
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ----HFKKPWAH-EHEPVKE 308 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~----~~k~~~a~-~~~~~~~ 308 (497)
-...||+|.|| |-.|..+++.|++ .| .+++.+|+..- ......+. .....+.. +-....+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 77 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACS 77 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHHH
Confidence 34678999987 7777777777654 25 46888887521 00000010 00111111 1112246
Q ss_pred HHHHHhccCCcEEEEccCCCCC---C-------------CHHHHHHHHccC-CCceEEecC
Q 010939 309 LVDAVNAIKPTILIGTSGQGRT---F-------------TKEVVEAMASLN-EKPIIFSLS 352 (497)
Q Consensus 309 L~e~v~~vkptvLIG~S~~~g~---F-------------teevi~~Ma~~~-~rPIIFaLS 352 (497)
+.++++.+++|++|=+.+.... . +..+++.+.+.. .+.+||.=|
T Consensus 78 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 78 VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 7888888889999987775421 1 234667776655 367787544
No 434
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=56.95 E-value=15 Score=34.20 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=24.3
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|++++++|.||++ .|.++|+.+. + +| -+++++|++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~----~-~G-------~~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLA----A-DG-------ATVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH----H-TT-------CEEEEECSC
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHH----H-CC-------CEEEEEeCC
Confidence 358889999999853 3444444444 3 36 368888774
No 435
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=56.91 E-value=6.7 Score=39.89 Aligned_cols=35 Identities=26% Similarity=0.263 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G-------~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LG-------KSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CC-------CCEEEEeCCCC
Confidence 4579999999999999988765 36 36899998753
No 436
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=56.83 E-value=23 Score=33.12 Aligned_cols=38 Identities=29% Similarity=0.316 Sum_probs=24.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|++.+++|.||++ ||...++..+.+ +| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 45 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAK-AG-------ASVVVTDLK 45 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHH-HT-------CEEEEEESS
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 458889999999864 333444444444 36 368888874
No 437
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=56.72 E-value=6.4 Score=40.72 Aligned_cols=98 Identities=18% Similarity=0.219 Sum_probs=52.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 316 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 316 (497)
.+|+|+|.|.-|..+|++|.. .| .+++++|++- ++-+.+.....+... +......|.++ .--
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-----~g-------~~vvvId~d~----~~v~~~~~~g~~vi~GDat~~~~L~~a-gi~ 67 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-----SG-------VKMVVLDHDP----DHIETLRKFGMKVFYGDATRMDLLESA-GAA 67 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECCH----HHHHHHHHTTCCCEESCTTCHHHHHHT-TTT
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECCH----HHHHHHHhCCCeEEEcCCCCHHHHHhc-CCC
Confidence 479999999999999999875 36 4688898761 110001100000000 11111223333 223
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCceEEecCC
Q 010939 317 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 353 (497)
Q Consensus 317 kptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIFaLSN 353 (497)
+++++|=+.... .-+..++....+++...-|++.+|
T Consensus 68 ~A~~viv~~~~~-~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 68 KAEVLINAIDDP-QTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp TCSEEEECCSSH-HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ccCEEEECCCCh-HHHHHHHHHHHHhCCCCeEEEEEC
Confidence 588888665532 234445555555566655555554
No 438
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=56.70 E-value=9.4 Score=39.36 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EG-------LKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 3589999999999999987754 36 3699999853
No 439
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=56.69 E-value=9.3 Score=39.51 Aligned_cols=34 Identities=15% Similarity=0.345 Sum_probs=26.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G-------~~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----G-------LNVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 35799999999999999998753 5 3577777653
No 440
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=56.64 E-value=9.5 Score=38.94 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=25.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888653 63 56677665
No 441
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=56.47 E-value=9.7 Score=41.90 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|||+|||.||+..|..|.. .| .++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 4689999999999999998865 36 3699999864
No 442
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=56.42 E-value=34 Score=32.07 Aligned_cols=38 Identities=37% Similarity=0.501 Sum_probs=24.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.++++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~-~G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAK-LK-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEEcC
Confidence 458889999999753 344444444444 36 368888875
No 443
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=56.41 E-value=21 Score=35.00 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=35.5
Q ss_pred chhHHHHHHHHHHHHHhCCCCCC--ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 215 GTASVVLAGLISAMKFLGGSLAD--QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 215 GTa~V~lAgll~Al~~~g~~l~d--~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
++-...++..+.|+.-.+.--.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 44344555666677333333345 89999998 8888777666543 363 478888864
No 444
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=56.17 E-value=14 Score=36.22 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=24.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+||-|+|-|.-|.++|..|++. |. +++++|+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr~ 37 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNRT 37 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC---
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999999763 64 67888864
No 445
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=56.17 E-value=6.4 Score=38.05 Aligned_cols=33 Identities=18% Similarity=0.492 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
...|+|+|||.+|+.+|-.|. . | .++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 468999999999999998885 1 5 4699999874
No 446
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=56.16 E-value=28 Score=32.32 Aligned_cols=37 Identities=22% Similarity=0.304 Sum_probs=24.4
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..|++++++|.||++ .|.++|+.| .+ +| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l----~~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTY----AR-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHH----HH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHH----HH-CC-------CEEEEEeCC
Confidence 458889999999854 344444444 33 36 368888875
No 447
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=56.12 E-value=8.4 Score=40.13 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|+|+|||.+|+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999988864 374 588899874
No 448
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=56.10 E-value=20 Score=33.65 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=24.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|++.+++|.||+. ||...++..+.+ +| -+++++|++
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 40 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDIL 40 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999754 333444444444 36 368888875
No 449
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=56.00 E-value=28 Score=33.84 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 220 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 220 ~lAgll~Al~~~g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+....+.+++..+.+ ..++++|+|||+.|.-.+.++..+ .| .+++.+|+.
T Consensus 148 ~~~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~~ 197 (348)
T 4eez_A 148 AGVTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDIN 197 (348)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEESC
T ss_pred ceeeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEECc
Confidence 334456777777654 467999999998886554444322 23 578877763
No 450
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=55.88 E-value=7.4 Score=38.78 Aligned_cols=97 Identities=16% Similarity=0.166 Sum_probs=51.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 313 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v 313 (497)
+.+..||.|+|+|..|...++.+.. +..|. +=+.++|++ ..+ .....+.|--......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHh
Confidence 3455799999999988766555532 11121 223466653 111 1122222210012247899999
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCceEE
Q 010939 314 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 349 (497)
Q Consensus 314 ~~vkptvLIG~S~~~g~Fteevi~~Ma~~~~rPIIF 349 (497)
+.-++|+++ ++++. .+-.++++...+.. ++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~aG-k~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNAN-KYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHCC-CCEEe
Confidence 987899988 55554 35555555444332 45553
No 451
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=55.81 E-value=9.3 Score=39.03 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
..|+|+|||.||+..|-.+.+ .| .++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G-------~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EG-------ANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC
Confidence 579999999999999988764 36 46999998653
No 452
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=55.58 E-value=19 Score=34.67 Aligned_cols=80 Identities=6% Similarity=0.113 Sum_probs=44.9
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhh-----hc-cc
Q 010939 233 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-----AH-EH 303 (497)
Q Consensus 233 ~~l~d~riv~~GAGs---Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~-----a~-~~ 303 (497)
.+|++.++||.||++ .|.+||+.|++ +| -+++++|++. ...+.+......+ .. +-
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv 89 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLSE----TFKKRVDPLAESLGVKLTVPCDV 89 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHHTCCEEEECCT
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcCC
Confidence 458889999999963 45557777654 36 3688888762 1101111111111 00 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCCC
Q 010939 304 EPVKELVDAVNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 304 ~~~~~L~e~v~~v-----kptvLIG~S~~~ 328 (497)
....++.++++.+ +.|+||=..+..
T Consensus 90 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 90 SDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 1223566666655 799999776653
No 453
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=55.55 E-value=10 Score=38.56 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=27.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987631 13 5799999875
No 454
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=55.51 E-value=29 Score=31.53 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=24.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.++++.+++|.||+. ||...++..+.+ +| -+++++|++
T Consensus 3 ~~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999998743 444444444444 36 368888875
No 455
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=55.46 E-value=32 Score=32.33 Aligned_cols=94 Identities=15% Similarity=0.204 Sum_probs=52.9
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 010939 239 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 316 (497)
Q Consensus 239 riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~v~~v 316 (497)
||+|.|| |-.|..+++.|.+ .| .+++.+|+.. ....... .....+.. +-.... +.++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~-- 62 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLS---SGRREFV-NPSAELHVRDLKDYS-WGAGIK-- 62 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS---SCCGGGS-CTTSEEECCCTTSTT-TTTTCC--
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC---CCchhhc-CCCceEEECccccHH-HHhhcC--
Confidence 7999998 8888888888765 36 3688887642 1111111 11111111 111112 444444
Q ss_pred CCcEEEEccCCCCC-C---------------CHHHHHHHHccCCCceEEecC
Q 010939 317 KPTILIGTSGQGRT-F---------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 317 kptvLIG~S~~~g~-F---------------teevi~~Ma~~~~rPIIFaLS 352 (497)
.|++|=+.+.... . +..+++.+.+..-+.|||.=|
T Consensus 63 -~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 63 -GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp -CSEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 3999987765321 1 235677777776678888655
No 456
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=55.34 E-value=15 Score=35.33 Aligned_cols=101 Identities=18% Similarity=0.099 Sum_probs=57.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCc-cCCchhchhh----------hc-ccC
Q 010939 238 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL-ESLQHFKKPW----------AH-EHE 304 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~-~~l~~~k~~~----------a~-~~~ 304 (497)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.-- ..|. ....+....+ .. +-.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 68 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHN--AFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSS--SCBCSSSSBHHHHHHHHHHTCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCc--ccccccccHHHHHHHHhccCCceEEEECCCC
Confidence 58999986 8888888887765 36 36888887421 0010 0011111111 11 111
Q ss_pred CCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 305 PVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 305 ~~~~L~e~v~~vkptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
...++.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 69 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 69 DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 12357777876679999988775421 1345777777765567888544
No 457
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=55.30 E-value=11 Score=39.31 Aligned_cols=40 Identities=28% Similarity=0.343 Sum_probs=29.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHH-------hcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISK-------QTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~-------~~G~s~eeA~~~i~~vD~~GL 283 (497)
..+|||+|||.||+..|-.|...+-. ..| -++.++++.-.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G-------~~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPK-------LNITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCS-------CEEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCC-------CeEEEEeCCCC
Confidence 46899999999999999998764310 025 37899998644
No 458
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=55.20 E-value=11 Score=39.01 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=28.6
Q ss_pred CceEEEeCcChHHHHHHHHHHH-HHHH-hcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIAL-EISK-QTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~-~~~~-~~G~s~eeA~~~i~~vD~~ 281 (497)
..+|+|+|||.||+..|..|.. .... ..| .++.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 4689999999999999999976 4210 002 479999986
No 459
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=55.17 E-value=47 Score=30.77 Aligned_cols=76 Identities=17% Similarity=0.235 Sum_probs=41.8
Q ss_pred CCCCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHH
Q 010939 233 GSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 311 (497)
Q Consensus 233 ~~l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e 311 (497)
.++++.+++|.||++ .|..+|+.| .+ +| -+++++|++- ...+.+. +..+.-+- ..++.+
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l----~~-~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVL----SQ-EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHH----HH-TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHH----HH-CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHH
Confidence 468889999999853 344444444 33 36 3688888763 0000110 00110111 245666
Q ss_pred HHhcc-CCcEEEEccCCC
Q 010939 312 AVNAI-KPTILIGTSGQG 328 (497)
Q Consensus 312 ~v~~v-kptvLIG~S~~~ 328 (497)
+++.+ ++|+||=..+..
T Consensus 75 ~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHHSCCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 66655 799999877643
No 460
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=55.17 E-value=11 Score=35.12 Aligned_cols=77 Identities=19% Similarity=0.232 Sum_probs=41.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-------ccCCC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-------EHEPV 306 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-------~~~~~ 306 (497)
+|++++++|.||++ ||...++..+.+ +| -+++++|++- +.+......+.. +-...
T Consensus 6 ~l~gk~~lVTGas~---gIG~a~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 6 NLEGKVALVTGASR---GIGKAIAELLAE-RG-------AKVIGTATSE-------SGAQAISDYLGDNGKGMALNVTNP 67 (248)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCCH
Confidence 57888999999854 333344444444 37 3688887641 112111111111 11122
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 010939 307 KELVDAVNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 307 ~~L~e~v~~v-----kptvLIG~S~~~ 328 (497)
.++.++++.+ +.|+||=..+..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455556544 799999777653
No 461
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=55.12 E-value=13 Score=38.56 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=26.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 279 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD 279 (497)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 45899999999999999998761 16 4799999
No 462
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=55.09 E-value=11 Score=38.38 Aligned_cols=35 Identities=14% Similarity=0.218 Sum_probs=27.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999887531 13 57999998753
No 463
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=55.05 E-value=10 Score=37.31 Aligned_cols=102 Identities=14% Similarity=0.177 Sum_probs=58.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchh--chhhhcccCCCCCHHHHHh
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF--KKPWAHEHEPVKELVDAVN 314 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~--k~~~a~~~~~~~~L~e~v~ 314 (497)
..||.|+|+|+-|..+|..|... | .+++++|+.--+..-+...+... ...+........++.+ ++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 69 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LG 69 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cC
Confidence 46899999999999999998763 5 36888887311000000001000 0000000001245655 44
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcc-CCCceEEecCCCC
Q 010939 315 AIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 355 (497)
Q Consensus 315 ~vkptvLIG~S~~~g~Fteevi~~Ma~~-~~rPIIFaLSNPt 355 (497)
. +|++| ++... -..+++++.++.+ .+..+|..++|.-
T Consensus 70 ~--~D~Vi-lavk~-~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 E--QDVVI-VAVKA-PALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp C--CSEEE-ECCCH-HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred C--CCEEE-EeCCc-hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 3 88877 44433 3567888887755 3567889999983
No 464
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=55.01 E-value=13 Score=37.88 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=26.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..+|+|+|||.+|+..|..|.+. | .++.++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-----g-------~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-----G-------HQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-----T-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 46899999999999999988763 6 357777765
No 465
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=55.00 E-value=14 Score=40.83 Aligned_cols=35 Identities=31% Similarity=0.303 Sum_probs=27.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
..=.||.|+|+|.-|.+||..+..+ |. +++++|++
T Consensus 312 ~~i~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 346 (715)
T 1wdk_A 312 KDVKQAAVLGAGIMGGGIAYQSASK-----GT-------PILMKDIN 346 (715)
T ss_dssp CCCSSEEEECCHHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCEEEEECCChhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 3345899999999999999998763 64 58888864
No 466
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=54.82 E-value=32 Score=32.05 Aligned_cols=76 Identities=18% Similarity=0.214 Sum_probs=41.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc----------cc
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------EH 303 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~----------~~ 303 (497)
++++.++||.||++ ||...++..+.+ +| -+++++|++. +.+...+..+.. +-
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EG-------FTVFAGRRNG-------EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TT-------CEEEEEESSG-------GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCeEEEEECcC
Confidence 57788999999864 444444444444 37 3689888851 112222222211 11
Q ss_pred CCCCCHHHHHhcc----CCcEEEEccCC
Q 010939 304 EPVKELVDAVNAI----KPTILIGTSGQ 327 (497)
Q Consensus 304 ~~~~~L~e~v~~v----kptvLIG~S~~ 327 (497)
....++.++++.+ ++|+||=..+.
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGA 93 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCc
Confidence 1123455555554 78999976664
No 467
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=54.82 E-value=12 Score=39.13 Aligned_cols=26 Identities=27% Similarity=0.448 Sum_probs=23.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~ 259 (497)
+|+++++||+|+|..|..-+++|.++
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ 34 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEA 34 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhC
Confidence 57889999999999999999999864
No 468
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=54.81 E-value=9.7 Score=39.06 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=27.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+.+++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----G-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEecC
Confidence 346899999999999999888653 6 468999965
No 469
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=54.80 E-value=23 Score=35.17 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=25.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcc
Q 010939 233 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 280 (497)
Q Consensus 233 ~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~ 280 (497)
.--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 33457899999999877666554432 264 57888875
No 470
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=54.78 E-value=15 Score=37.09 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=28.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
..+|+|+|||.+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 56899999999999999998764 51 14788888753
No 471
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=54.66 E-value=9.4 Score=38.52 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+|+|+|||.+|+..|..|.+ .|.+ .++.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCC
Confidence 589999999999999998865 3631 278888875
No 472
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=54.58 E-value=23 Score=34.14 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=58.9
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCch-----hchhhhc-ccCCCC
Q 010939 235 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-----FKKPWAH-EHEPVK 307 (497)
Q Consensus 235 l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~-----~k~~~a~-~~~~~~ 307 (497)
+++.+|+|.|| |-.|..+++.|.+ .| .+++.+|+.. .+...+.. .+..+.. +-....
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 8888888877764 36 3688888752 11111110 0111111 111224
Q ss_pred CHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccC-CCceEEecC
Q 010939 308 ELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLN-EKPIIFSLS 352 (497)
Q Consensus 308 ~L~e~v~~vkptvLIG~S~~~g~----------------Fteevi~~Ma~~~-~rPIIFaLS 352 (497)
++.++++.+++|++|=+.+.... -+..+++.+.+.. .+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57788887789999988775321 0133566665554 457888655
No 473
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=54.53 E-value=10 Score=38.89 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=29.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
+.+|+|+|||-+|+..|-.|.. .| .++.++|++.-+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~-----~G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSV-----DG-------KKVLHIDKQDHY 46 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCCCC
Confidence 4589999999999999988865 36 579999987543
No 474
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=54.48 E-value=13 Score=35.04 Aligned_cols=36 Identities=17% Similarity=0.409 Sum_probs=27.0
Q ss_pred CCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGs---Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|+++++||-||++ .|.+||+.|.+ +| -+++++|++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~-----~G-------a~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQ-----LG-------AKLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 68999999999853 55666776654 47 478999875
No 475
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=54.45 E-value=8.5 Score=39.21 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=18.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHH
Q 010939 238 QRFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~ 259 (497)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 3799999999999999888653
No 476
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=54.40 E-value=9.8 Score=39.38 Aligned_cols=36 Identities=28% Similarity=0.456 Sum_probs=28.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 238 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 238 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 57999999999999999886530 004 3799999874
No 477
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=54.39 E-value=32 Score=34.02 Aligned_cols=33 Identities=18% Similarity=0.467 Sum_probs=24.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+++++|.|||..|..++.++.. .| -+++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-------a~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-------LEVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-------CEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 8899999998777766665543 26 268888764
No 478
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=54.31 E-value=25 Score=32.70 Aligned_cols=37 Identities=16% Similarity=0.244 Sum_probs=26.1
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 233 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 233 ~~l~d~riv~~GAGs---Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.++++.++||.||+. .|.++|+.|.+ +| -+++++|+.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~ 42 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AG-------ARLIFTYAG 42 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CC-------CEEEEecCc
Confidence 357889999999853 45556666654 36 368888875
No 479
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=54.20 E-value=20 Score=35.17 Aligned_cols=103 Identities=19% Similarity=0.125 Sum_probs=57.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHH-HHHHHhcCCChhhhcCeEEEEccCCcccC-C-C---ccCCch-----------hc---
Q 010939 238 QRFLFLGA-GEAGTGIAELIA-LEISKQTNMPLEETRKKIWLVDSKGLIVS-S-R---LESLQH-----------FK--- 296 (497)
Q Consensus 238 ~riv~~GA-GsAg~Gia~ll~-~~~~~~~G~s~eeA~~~i~~vD~~GLi~~-~-r---~~~l~~-----------~k--- 296 (497)
.+|+|.|| |-.|..+++.|+ + .| .+++++|+..--.. . . .+.+.. .+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~-----~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRD-----TN-------HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRY 70 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-----CC-------CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHh-----CC-------CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCce
Confidence 48999996 777877877776 3 36 46888887521000 0 0 000100 00
Q ss_pred hhhhc-ccCCCCCHHHHHhccC-CcEEEEccCCCCC----------------CCHHHHHHHHccCCCceEEecC
Q 010939 297 KPWAH-EHEPVKELVDAVNAIK-PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 297 ~~~a~-~~~~~~~L~e~v~~vk-ptvLIG~S~~~g~----------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
..+.. +-....++.++++..+ +|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 71 ~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS 144 (397)
T 1gy8_A 71 AALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144 (397)
T ss_dssp CEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECC
Confidence 01111 1111235777787666 9999988775421 1335677777666567888533
No 480
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=54.19 E-value=23 Score=34.43 Aligned_cols=52 Identities=10% Similarity=-0.087 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 218 SVVLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 218 ~V~lAgll~Al~~~g~~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
.+.++..+.+++-...--.+++++|.|| |..|..++.++.. .| -+++.+|+.
T Consensus 127 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 127 MLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 3344555566653334345789999996 8888888776654 36 268888764
No 481
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=54.13 E-value=9.2 Score=44.36 Aligned_cols=41 Identities=20% Similarity=0.345 Sum_probs=32.8
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
|++.||+++|||.-|+-+++.|+.+ |+..- ..++|.++|.+
T Consensus 423 L~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D 463 (1015)
T 3cmm_A 423 IANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDND 463 (1015)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCC
T ss_pred HhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCC
Confidence 5678999999999999999999876 65211 12699999987
No 482
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=54.10 E-value=7.5 Score=40.70 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHH
Q 010939 239 RFLFLGAGEAGTGIAELIALEI 260 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~ 260 (497)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887653
No 483
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.05 E-value=7.9 Score=38.61 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 284 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi 284 (497)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 3589999999999999988842 12 79999987543
No 484
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=53.93 E-value=12 Score=36.87 Aligned_cols=102 Identities=19% Similarity=0.209 Sum_probs=60.3
Q ss_pred CCCCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhh-------hc-c
Q 010939 232 GGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-------AH-E 302 (497)
Q Consensus 232 g~~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~-------a~-~ 302 (497)
...+++.+|+|.|| |..|..+++.|++. .|. .+++++|++-- .+...+..+ .. +
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~-------~~~~~~~~~~~~~v~~~~~D 78 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL-------KQSEMAMEFNDPRMRFFIGD 78 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH-------HHHHHHHHHCCTTEEEEECC
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh-------hHHHHHHHhcCCCEEEEECC
Confidence 34577889999996 88888888888652 152 47888887411 011111111 11 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----C------------CHHHHHHHHccCCCceEEecC
Q 010939 303 HEPVKELVDAVNAIKPTILIGTSGQGRT----F------------TKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 303 ~~~~~~L~e~v~~vkptvLIG~S~~~g~----F------------teevi~~Ma~~~~rPIIFaLS 352 (497)
-....++.++++. +|++|=+.+.... . +..+++++.+..-+-|||.=|
T Consensus 79 l~d~~~l~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 79 VRDLERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TTCHHHHHHHTTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCHHHHHHHHhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 1122457777774 9999988876431 0 134666666665566777554
No 485
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=53.88 E-value=12 Score=38.61 Aligned_cols=110 Identities=12% Similarity=0.040 Sum_probs=62.0
Q ss_pred CceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc--cCCcc--cCCCccCCchhchhhhcccCCCCCHHH
Q 010939 237 DQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD--SKGLI--VSSRLESLQHFKKPWAHEHEPVKELVD 311 (497)
Q Consensus 237 d~riv~~G-AGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD--~~GLi--~~~r~~~l~~~k~~~a~~~~~~~~L~e 311 (497)
..||.|+| ||..|..+|-.|+.. ++-.| ...+.++| ..... .++-.-+|++-..+|.+...-..+..+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~e--~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~ 104 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFGQ--DQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYE 104 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTCT--TCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCCC--CceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHH
Confidence 36999999 799999998877652 44111 12255544 32100 000000133322234332222246788
Q ss_pred HHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcc-CCCceEEecCCCC
Q 010939 312 AVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASL-NEKPIIFSLSNPT 355 (497)
Q Consensus 312 ~v~~vkptvLIG~S~~~---g~-----------Fteevi~~Ma~~-~~rPIIFaLSNPt 355 (497)
++++ .|++|=+.+.+ |- +=+++++.+.++ +..-||+-.|||.
T Consensus 105 ~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 105 VFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp HTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 8888 89887454433 31 113455667776 7889999999996
No 486
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=53.87 E-value=34 Score=31.91 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=23.5
Q ss_pred CCCCceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
++++.++||.||+ ..|.++|+.|. + .| -+++++|++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~----~-~G-------~~V~~~~r~ 62 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLG----S-LG-------ARVVLTARD 62 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHH----H-TT-------CEEEEEESC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHH----H-CC-------CEEEEEECC
Confidence 3678899999974 34445555554 3 36 368888875
No 487
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=53.82 E-value=13 Score=38.71 Aligned_cols=35 Identities=17% Similarity=0.518 Sum_probs=28.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCc
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GL 283 (497)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~~ 41 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREAF 41 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCCC
Confidence 4689999999999999987754 364 6899998853
No 488
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=53.78 E-value=23 Score=33.29 Aligned_cols=100 Identities=10% Similarity=0.146 Sum_probs=55.2
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHH
Q 010939 234 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 312 (497)
Q Consensus 234 ~l~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~ 312 (497)
++...||+|.|| |-.|..+++.|++ .| .+++.+|+..--.....+.+.. +. ......-+..-
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~~~~~~~~~~----~~-~~~~~~~~~~D 66 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVA-----SG-------EEVTVLDDLRVPPMIPPEGTGK----FL-EKPVLELEERD 66 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEECCCSSCCSSCCTTSSE----EE-CSCGGGCCHHH
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEecCCcccccchhhhhh----hc-cCCCeeEEeCc
Confidence 355789999999 8889888888875 26 3688888763210011111111 00 00111111111
Q ss_pred HhccCCcEEEEccCCCCC---------------CCHHHHHHHHccCCCceEEecC
Q 010939 313 VNAIKPTILIGTSGQGRT---------------FTKEVVEAMASLNEKPIIFSLS 352 (497)
Q Consensus 313 v~~vkptvLIG~S~~~g~---------------Fteevi~~Ma~~~~rPIIFaLS 352 (497)
+. ++|++|=+.+..+. -+..+++.+.++.-+.+||.=|
T Consensus 67 l~--~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 67 LS--DVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp HT--TEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred cc--cCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecC
Confidence 11 69999977765431 1256888888777677888544
No 489
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=53.73 E-value=11 Score=36.02 Aligned_cols=36 Identities=25% Similarity=0.360 Sum_probs=28.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHHhc-CCChhhhcCeEEEEccCCc
Q 010939 236 ADQRFLFLGAGEAGTGIAELIALEISKQT-NMPLEETRKKIWLVDSKGL 283 (497)
Q Consensus 236 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~-G~s~eeA~~~i~~vD~~GL 283 (497)
.+..|+|+|||.||+..|..+.+ . | .++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~-----~~G-------~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISK-----NPN-------VQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHT-----STT-------SCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHH-----cCC-------CeEEEEECCCC
Confidence 35689999999999999988753 2 5 46889998743
No 490
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=53.62 E-value=9.2 Score=39.63 Aligned_cols=25 Identities=28% Similarity=0.438 Sum_probs=21.2
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHH
Q 010939 235 LADQRFLFLGAGEAGTGIAELIALE 259 (497)
Q Consensus 235 l~d~riv~~GAGsAg~Gia~ll~~~ 259 (497)
....+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3456899999999999999998763
No 491
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=53.49 E-value=22 Score=37.13 Aligned_cols=96 Identities=13% Similarity=0.168 Sum_probs=61.2
Q ss_pred CCCCCCceEEEeCc----------ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc
Q 010939 232 GGSLADQRFLFLGA----------GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 301 (497)
Q Consensus 232 g~~l~d~riv~~GA----------GsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~ 301 (497)
++++++.||.++|. -|..+.|++.|.+ .| -++.+.|..-. +..+..|-.
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~-----~g-------~~v~~~DP~~~---------~~~~~~~~~ 371 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLE-----VG-------CRVRVYDPVAM---------KEAQKRLGD 371 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHH-----TT-------CEEEEECSSCH---------HHHHHHHGG
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHH-----CC-------CEEEEECCCCc---------HHHHHhcCc
Confidence 67899999999997 4678899888876 36 36888888631 111222321
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCCC---CHHHHHHHHccCCCceEEecCCC
Q 010939 302 EHEPVKELVDAVNAIKPTILIGTSGQGRTF---TKEVVEAMASLNEKPIIFSLSNP 354 (497)
Q Consensus 302 ~~~~~~~L~e~v~~vkptvLIG~S~~~g~F---teevi~~Ma~~~~rPIIFaLSNP 354 (497)
.-.-..++.|+++. +|++|=+.. ..-| +.+.++.+ -+.|+||=.-|=
T Consensus 372 ~~~~~~~~~~~~~~--ad~~vi~t~-~~~f~~~~~~~~~~~---~~~~~i~D~r~~ 421 (450)
T 3gg2_A 372 KVEYTTDMYDAVRG--AEALFHVTE-WKEFRMPDWSALSQA---MAASLVIDGRNV 421 (450)
T ss_dssp GSEECSSHHHHTTT--CSCEEECSC-CGGGSSCCHHHHHHH---SSSCEEEESSCC
T ss_pred cceecCCHHHHhcC--CCEEEEccC-CHHHhhcCHHHHHHh---cCCCEEEECCCC
Confidence 11123678999988 898884443 4456 44444432 257888865553
No 492
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=53.47 E-value=13 Score=35.95 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=27.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 239 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 239 riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
.|+|+|||.+|+.+|-.|.+. |.+. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc-CCCceEEEEECCC
Confidence 689999999999999888653 3110 0014799999873
No 493
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=53.43 E-value=19 Score=34.11 Aligned_cols=81 Identities=20% Similarity=0.279 Sum_probs=39.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHH
Q 010939 232 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELV 310 (497)
Q Consensus 232 g~~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~ 310 (497)
+.++.+++++|.||++ ||...++..+.+ +| -+++++|++- .+.+.+...+..+.. +-....++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EG-------HPLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TT-------CCEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999853 344444444444 36 3688888751 110111111111111 111223455
Q ss_pred HHHhcc-----CCcEEEEccCC
Q 010939 311 DAVNAI-----KPTILIGTSGQ 327 (497)
Q Consensus 311 e~v~~v-----kptvLIG~S~~ 327 (497)
++++.+ ++|+||=..+.
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~ 97 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGM 97 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCc
Confidence 556544 68999977664
No 494
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=53.38 E-value=11 Score=38.66 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=27.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+..|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~-----~G-------~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA-----LG-------KKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 3579999999999999988754 36 478999984
No 495
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=53.35 E-value=32 Score=37.11 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=23.7
Q ss_pred CCC-ceEEEeCcChHHHHHHHHHHHHHH
Q 010939 235 LAD-QRFLFLGAGEAGTGIAELIALEIS 261 (497)
Q Consensus 235 l~d-~riv~~GAGsAg~Gia~ll~~~~~ 261 (497)
|++ .||.|+|.|+-|-++|.-|.+++.
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~~ 78 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSLA 78 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhccc
Confidence 666 899999999999999999988643
No 496
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=53.27 E-value=42 Score=31.46 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=40.9
Q ss_pred CCCceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhc-ccCCCCCHHHH
Q 010939 235 LADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 312 (497)
Q Consensus 235 l~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~-~~~~~~~L~e~ 312 (497)
+++++++|.||++ .|.++|+.| .+ +| -+++++|++- .. ....+..+.. +-....++.++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l----~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~Dv~d~~~v~~~ 86 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAY----RD-RN-------YRVVATSRSI----KP---SADPDIHTVAGDISKPETADRI 86 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHH----HH-TT-------CEEEEEESSC----CC---CSSTTEEEEESCTTSHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHH----HH-CC-------CEEEEEeCCh----hh---cccCceEEEEccCCCHHHHHHH
Confidence 5677999999753 344444444 43 36 4788888751 11 1111111111 11222345556
Q ss_pred Hhcc-----CCcEEEEccCCC
Q 010939 313 VNAI-----KPTILIGTSGQG 328 (497)
Q Consensus 313 v~~v-----kptvLIG~S~~~ 328 (497)
++.+ ++|+||=..+..
T Consensus 87 ~~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 87 VREGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCCCEEEECCCCC
Confidence 6544 799999776653
No 497
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=53.17 E-value=18 Score=33.76 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=23.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccC
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 281 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~ 281 (497)
+|++.+++|.||+. ||...++..+.+ +| -+++++|++
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AG-------ATVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 47788999999753 333444444444 36 368888875
No 498
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=53.11 E-value=12 Score=40.03 Aligned_cols=34 Identities=26% Similarity=0.505 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+..|+|+|+|.+|+++|..+.. .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4579999999999999998865 374 589999764
No 499
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=53.06 E-value=13 Score=37.40 Aligned_cols=34 Identities=15% Similarity=0.350 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCC
Q 010939 237 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 282 (497)
Q Consensus 237 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~G 282 (497)
+.+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-----g-------~~v~v~E~~~ 38 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-----G-------LSVAVIEARD 38 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEECCC
Confidence 46899999999999999988653 5 3577787753
No 500
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=52.98 E-value=55 Score=30.23 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=40.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEccCCcccCCCccCCchhchhhhcccCCCCCHHHHH
Q 010939 234 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 313 (497)
Q Consensus 234 ~l~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~s~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~~~a~~~~~~~~L~e~v 313 (497)
+|++.+++|.||++ ||...++..+.+ +| -+++++|++--+ .... -..+.-+-....++.+++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~~ 65 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQVC 65 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHHH
Confidence 47788999999743 333444444444 36 368888875211 0010 000111111223455556
Q ss_pred hcc-----CCcEEEEccCC
Q 010939 314 NAI-----KPTILIGTSGQ 327 (497)
Q Consensus 314 ~~v-----kptvLIG~S~~ 327 (497)
+.+ ++|+||=..+.
T Consensus 66 ~~~~~~~g~id~lv~~Ag~ 84 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGI 84 (250)
T ss_dssp HHHHHHCSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCc
Confidence 544 79999977664
Done!