Query 010940
Match_columns 497
No_of_seqs 133 out of 1338
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 17:28:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.6E-66 5.6E-71 529.1 39.7 432 7-488 11-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 4.5E-60 1.5E-64 489.4 43.6 441 7-490 4-470 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 8.2E-61 2.8E-65 496.4 35.9 454 1-488 1-478 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 6.7E-60 2.3E-64 485.0 37.9 435 7-489 5-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 3.1E-59 1.1E-63 481.3 36.2 437 8-488 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.8E-44 9.6E-49 367.4 34.1 398 7-488 10-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.5E-43 1.2E-47 356.2 29.4 367 8-487 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.7E-41 1.3E-45 343.2 24.0 383 10-492 1-403 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 3.3E-39 1.1E-43 328.8 30.9 364 8-468 19-397 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 4.4E-40 1.5E-44 335.4 23.6 382 10-491 1-403 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 2.1E-38 7.1E-43 321.2 34.9 382 8-489 3-398 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 8.6E-40 2.9E-44 331.8 23.3 368 10-489 1-382 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 4.9E-38 1.7E-42 322.8 26.6 384 8-492 19-438 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 2.2E-37 7.6E-42 316.8 31.0 374 1-469 1-384 (430)
15 2p6p_A Glycosyl transferase; X 100.0 3.7E-36 1.3E-40 303.1 27.4 359 10-487 1-377 (384)
16 4fzr_A SSFS6; structural genom 100.0 2E-35 7E-40 299.1 21.8 349 8-467 14-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 6.4E-34 2.2E-38 288.2 28.5 362 8-487 19-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.2E-33 4.2E-38 285.3 25.9 364 9-489 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 5.2E-31 1.8E-35 267.8 32.5 366 8-489 19-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 8.4E-29 2.9E-33 247.2 26.4 342 10-495 3-359 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.2E-26 4E-31 206.0 15.0 163 272-467 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 2.3E-18 8E-23 171.3 25.3 307 9-445 6-322 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 7.1E-15 2.4E-19 133.9 9.6 132 286-446 27-197 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 1.4E-13 4.8E-18 130.6 16.7 118 287-419 157-276 (282)
25 3okp_A GDP-mannose-dependent a 99.4 1.1E-10 3.7E-15 116.7 29.2 328 7-463 2-359 (394)
26 3c48_A Predicted glycosyltrans 99.4 1.6E-10 5.3E-15 117.6 29.9 377 8-491 19-429 (438)
27 2gek_A Phosphatidylinositol ma 99.3 1E-09 3.6E-14 110.1 30.2 322 8-462 19-363 (406)
28 1v4v_A UDP-N-acetylglucosamine 99.3 2E-10 6.7E-15 114.4 23.6 128 287-448 198-334 (376)
29 2r60_A Glycosyl transferase, g 99.3 7.3E-10 2.5E-14 114.8 25.4 150 289-464 263-440 (499)
30 3fro_A GLGA glycogen synthase; 99.3 3E-09 1E-13 107.8 28.5 147 289-464 252-412 (439)
31 3ot5_A UDP-N-acetylglucosamine 99.2 4.1E-10 1.4E-14 113.2 20.9 171 286-497 223-402 (403)
32 2iw1_A Lipopolysaccharide core 99.2 1.4E-09 4.9E-14 107.7 24.7 147 289-464 197-353 (374)
33 1vgv_A UDP-N-acetylglucosamine 99.2 1.4E-09 4.7E-14 108.4 21.3 129 287-448 205-342 (384)
34 3dzc_A UDP-N-acetylglucosamine 99.2 5.1E-09 1.7E-13 105.0 23.7 129 287-448 230-367 (396)
35 2iuy_A Avigt4, glycosyltransfe 99.1 1.6E-09 5.5E-14 106.3 18.5 127 290-447 164-307 (342)
36 2jjm_A Glycosyl transferase, g 99.1 3.7E-08 1.2E-12 98.5 27.4 330 9-463 15-365 (394)
37 2x6q_A Trehalose-synthase TRET 99.0 1.1E-08 3.7E-13 103.2 20.4 91 347-461 292-392 (416)
38 3beo_A UDP-N-acetylglucosamine 99.0 3.8E-08 1.3E-12 97.5 22.9 131 287-448 205-342 (375)
39 4hwg_A UDP-N-acetylglucosamine 98.9 2.4E-08 8.2E-13 99.5 16.8 322 9-452 9-346 (385)
40 3s28_A Sucrose synthase 1; gly 98.7 1.5E-06 5.3E-11 93.9 24.2 150 289-463 573-749 (816)
41 1rzu_A Glycogen synthase 1; gl 98.6 9.7E-06 3.3E-10 83.2 26.5 128 289-448 292-443 (485)
42 2qzs_A Glycogen synthase; glyc 98.6 1.1E-05 3.7E-10 82.8 25.9 128 289-448 293-444 (485)
43 3oy2_A Glycosyltransferase B73 98.5 3.3E-05 1.1E-09 77.3 25.3 130 289-448 185-355 (413)
44 2xci_A KDO-transferase, 3-deox 98.5 3.2E-05 1.1E-09 76.6 24.4 100 349-469 261-366 (374)
45 2vsy_A XCC0866; transferase, g 98.5 0.00037 1.3E-08 72.8 32.6 82 348-448 434-522 (568)
46 2f9f_A First mannosyl transfer 98.4 1.5E-06 5.2E-11 76.4 12.0 131 289-450 24-164 (177)
47 2hy7_A Glucuronosyltransferase 98.4 7.6E-05 2.6E-09 74.8 23.3 77 347-449 264-353 (406)
48 2x0d_A WSAF; GT4 family, trans 98.0 0.00011 3.8E-09 73.7 16.7 79 347-448 294-379 (413)
49 3qhp_A Type 1 capsular polysac 97.7 0.00028 9.7E-09 60.6 11.9 141 288-464 2-156 (166)
50 2bfw_A GLGA glycogen synthase; 97.5 0.0013 4.6E-08 58.1 12.5 92 349-463 96-196 (200)
51 4gyw_A UDP-N-acetylglucosamine 97.4 0.0016 5.6E-08 69.9 14.7 103 286-394 521-630 (723)
52 3q3e_A HMW1C-like glycosyltran 97.4 0.0011 3.7E-08 68.7 12.4 136 288-448 441-588 (631)
53 3tov_A Glycosyl transferase fa 97.3 0.011 3.7E-07 57.6 18.2 108 5-146 4-115 (349)
54 3vue_A GBSS-I, granule-bound s 97.2 0.076 2.6E-06 54.8 24.2 137 289-447 328-476 (536)
55 1psw_A ADP-heptose LPS heptosy 96.9 0.024 8.3E-07 54.8 15.8 43 10-52 1-45 (348)
56 3rhz_A GTF3, nucleotide sugar 96.5 0.0093 3.2E-07 57.8 9.5 110 349-486 215-336 (339)
57 2gt1_A Lipopolysaccharide hept 94.8 0.28 9.6E-06 46.8 12.4 44 10-53 1-46 (326)
58 3t5t_A Putative glycosyltransf 88.8 7.7 0.00026 39.1 14.6 114 349-494 353-477 (496)
59 2wqk_A 5'-nucleotidase SURE; S 87.5 1.3 4.3E-05 40.5 7.2 41 10-52 2-42 (251)
60 2phj_A 5'-nucleotidase SURE; S 87.3 1.4 4.7E-05 40.1 7.2 41 10-52 2-42 (251)
61 1uqt_A Alpha, alpha-trehalose- 83.7 8.8 0.0003 38.6 12.0 107 352-490 336-454 (482)
62 3auf_A Glycinamide ribonucleot 83.5 10 0.00035 33.9 11.1 108 8-150 21-132 (229)
63 3nb0_A Glycogen [starch] synth 83.2 2.2 7.5E-05 44.7 7.2 43 350-394 495-550 (725)
64 1ccw_A Protein (glutamate muta 80.8 1.8 6.3E-05 35.3 4.7 40 8-47 2-41 (137)
65 2ywr_A Phosphoribosylglycinami 80.0 14 0.00047 32.7 10.6 106 10-150 2-111 (216)
66 3lqk_A Dipicolinate synthase s 79.5 2.1 7.3E-05 37.5 4.9 47 6-52 4-50 (201)
67 3vot_A L-amino acid ligase, BL 79.3 5.7 0.00019 39.2 8.7 99 5-144 1-101 (425)
68 2bw0_A 10-FTHFDH, 10-formyltet 79.2 8.7 0.0003 36.5 9.5 105 8-150 21-130 (329)
69 3dfz_A SIRC, precorrin-2 dehyd 75.7 1.9 6.7E-05 38.5 3.6 156 280-469 26-186 (223)
70 1mvl_A PPC decarboxylase athal 74.4 3.7 0.00013 36.2 4.9 47 7-55 17-63 (209)
71 3q0i_A Methionyl-tRNA formyltr 73.7 31 0.0011 32.5 11.6 36 7-47 5-40 (318)
72 3iqw_A Tail-anchored protein t 73.4 16 0.00055 34.7 9.7 41 9-49 15-56 (334)
73 3tqr_A Phosphoribosylglycinami 72.7 10 0.00035 33.5 7.4 109 7-150 3-114 (215)
74 1g5t_A COB(I)alamin adenosyltr 72.7 38 0.0013 29.3 11.0 38 9-46 28-65 (196)
75 4ds3_A Phosphoribosylglycinami 72.5 9.9 0.00034 33.4 7.3 109 7-150 5-117 (209)
76 1jkx_A GART;, phosphoribosylgl 72.2 37 0.0013 29.8 11.0 106 10-150 1-110 (212)
77 3av3_A Phosphoribosylglycinami 72.1 37 0.0013 29.8 11.0 106 10-150 4-113 (212)
78 1p3y_1 MRSD protein; flavoprot 71.9 1.7 5.8E-05 37.9 2.1 48 7-55 6-53 (194)
79 3mcu_A Dipicolinate synthase, 71.6 3.9 0.00013 36.0 4.4 42 7-49 3-45 (207)
80 2yxb_A Coenzyme B12-dependent 71.2 3.8 0.00013 34.5 4.1 42 8-49 17-58 (161)
81 3zqu_A Probable aromatic acid 70.9 3.8 0.00013 36.1 4.2 44 9-53 4-47 (209)
82 3fgn_A Dethiobiotin synthetase 69.5 32 0.0011 31.1 10.3 125 9-151 25-167 (251)
83 3qjg_A Epidermin biosynthesis 68.9 5.7 0.0002 33.9 4.8 45 10-55 6-50 (175)
84 3pdi_B Nitrogenase MOFE cofact 68.2 27 0.00092 34.8 10.4 34 110-148 367-400 (458)
85 3tov_A Glycosyl transferase fa 67.6 37 0.0013 32.2 11.0 101 9-150 185-289 (349)
86 1qzu_A Hypothetical protein MD 67.4 4.8 0.00016 35.4 4.1 49 6-55 16-65 (206)
87 2iz6_A Molybdenum cofactor car 67.3 30 0.001 29.4 9.0 46 350-395 91-140 (176)
88 4dzz_A Plasmid partitioning pr 66.4 25 0.00085 30.1 8.8 39 11-49 2-42 (206)
89 1id1_A Putative potassium chan 65.8 5.3 0.00018 32.9 3.9 34 8-46 2-35 (153)
90 3rfo_A Methionyl-tRNA formyltr 65.7 38 0.0013 31.8 10.3 38 7-49 2-39 (317)
91 3da8_A Probable 5'-phosphoribo 64.6 28 0.00094 30.7 8.5 109 7-150 10-120 (215)
92 4b4o_A Epimerase family protei 63.8 5.7 0.0002 36.8 4.2 33 10-46 1-33 (298)
93 1y80_A Predicted cobalamin bin 63.4 8.5 0.00029 33.8 5.0 45 8-52 87-131 (210)
94 3kcq_A Phosphoribosylglycinami 63.2 28 0.00096 30.6 8.3 103 8-150 7-113 (215)
95 1sbz_A Probable aromatic acid 62.4 5.5 0.00019 34.7 3.5 44 10-54 1-45 (197)
96 2i2x_B MTAC, methyltransferase 62.1 11 0.00036 34.5 5.6 43 8-50 122-164 (258)
97 1pzg_A LDH, lactate dehydrogen 60.6 4.9 0.00017 38.3 3.1 41 1-46 1-42 (331)
98 1fmt_A Methionyl-tRNA FMet for 60.6 43 0.0015 31.4 9.6 35 8-47 2-36 (314)
99 4h3k_B RNA polymerase II subun 59.7 74 0.0025 27.5 9.8 40 5-47 21-60 (214)
100 3pdi_A Nitrogenase MOFE cofact 59.2 49 0.0017 33.1 10.3 34 109-147 392-425 (483)
101 3u7q_B Nitrogenase molybdenum- 59.1 59 0.002 32.9 11.0 34 9-47 364-397 (523)
102 2ixd_A LMBE-related protein; h 58.8 44 0.0015 29.9 9.1 22 105-128 84-105 (242)
103 3n7t_A Macrophage binding prot 58.3 18 0.00063 32.6 6.4 38 9-46 9-57 (247)
104 4dim_A Phosphoribosylglycinami 58.3 39 0.0013 32.6 9.4 35 7-46 5-39 (403)
105 1qgu_B Protein (nitrogenase mo 58.1 56 0.0019 33.0 10.7 33 110-147 426-465 (519)
106 3io3_A DEHA2D07832P; chaperone 57.4 40 0.0014 32.1 8.9 41 8-48 16-59 (348)
107 1meo_A Phosophoribosylglycinam 56.5 54 0.0018 28.6 8.9 107 10-150 1-110 (209)
108 2vqe_B 30S ribosomal protein S 54.9 1.1E+02 0.0039 27.5 10.9 34 118-151 156-191 (256)
109 3rg8_A Phosphoribosylaminoimid 54.7 91 0.0031 25.8 9.4 140 289-471 4-151 (159)
110 1g63_A Epidermin modifying enz 54.5 11 0.00036 32.4 3.9 44 11-55 4-47 (181)
111 2lnd_A De novo designed protei 54.4 15 0.00052 26.2 3.9 50 384-447 49-100 (112)
112 1mio_A Nitrogenase molybdenum 53.9 50 0.0017 33.5 9.4 35 108-147 446-480 (533)
113 3ezx_A MMCP 1, monomethylamine 53.9 18 0.00063 31.8 5.5 45 8-52 91-135 (215)
114 3oow_A Phosphoribosylaminoimid 53.8 96 0.0033 25.8 9.7 145 288-472 6-159 (166)
115 2ejb_A Probable aromatic acid 53.6 13 0.00045 32.1 4.3 44 10-54 2-45 (189)
116 2qs7_A Uncharacterized protein 53.1 17 0.00059 29.7 4.8 40 11-50 10-49 (144)
117 3igf_A ALL4481 protein; two-do 52.3 45 0.0016 32.1 8.4 35 11-45 3-38 (374)
118 3ty2_A 5'-nucleotidase SURE; s 51.8 17 0.00057 33.1 4.8 43 8-52 10-52 (261)
119 3kkl_A Probable chaperone prot 51.3 21 0.00073 32.1 5.6 37 10-46 4-51 (244)
120 2i2c_A Probable inorganic poly 50.4 9.7 0.00033 35.0 3.2 27 368-394 37-69 (272)
121 2r8r_A Sensor protein; KDPD, P 50.2 23 0.00078 31.5 5.4 39 9-47 6-44 (228)
122 3zzm_A Bifunctional purine bio 50.0 20 0.00068 35.8 5.4 118 1-137 1-118 (523)
123 3tqq_A Methionyl-tRNA formyltr 50.0 61 0.0021 30.3 8.7 35 9-48 2-36 (314)
124 3p9y_A CG14216, LD40846P; phos 49.6 1.2E+02 0.0042 25.8 10.7 42 3-47 2-44 (198)
125 3gpi_A NAD-dependent epimerase 49.5 19 0.00064 32.9 5.1 33 9-46 3-35 (286)
126 4eg0_A D-alanine--D-alanine li 49.5 20 0.00069 33.5 5.4 46 1-46 5-54 (317)
127 4gi5_A Quinone reductase; prot 48.8 26 0.00089 32.3 5.8 39 6-44 19-60 (280)
128 2q6t_A DNAB replication FORK h 48.0 96 0.0033 30.4 10.4 42 11-52 202-244 (444)
129 3dm5_A SRP54, signal recogniti 47.9 49 0.0017 32.7 8.0 43 9-51 100-142 (443)
130 3op4_A 3-oxoacyl-[acyl-carrier 47.7 34 0.0012 30.5 6.5 41 1-45 1-41 (248)
131 3bgw_A DNAB-like replicative h 47.3 41 0.0014 33.3 7.5 43 11-53 199-241 (444)
132 2vrn_A Protease I, DR1199; cys 47.0 41 0.0014 28.5 6.6 46 1-47 1-46 (190)
133 3mc3_A DSRE/DSRF-like family p 46.8 35 0.0012 27.3 5.7 42 9-50 15-59 (134)
134 3dfu_A Uncharacterized protein 46.7 14 0.00047 33.1 3.5 33 8-45 5-37 (232)
135 1mio_B Nitrogenase molybdenum 45.9 68 0.0023 31.8 8.8 34 110-148 377-410 (458)
136 1psw_A ADP-heptose LPS heptosy 45.8 1.3E+02 0.0045 27.9 10.7 105 9-150 180-289 (348)
137 2bln_A Protein YFBG; transfera 45.7 81 0.0028 29.3 8.8 33 10-47 1-33 (305)
138 3lk7_A UDP-N-acetylmuramoylala 45.4 24 0.00082 35.0 5.4 40 1-45 1-40 (451)
139 1f0y_A HCDH, L-3-hydroxyacyl-C 45.3 14 0.00047 34.4 3.4 37 5-46 11-47 (302)
140 3k31_A Enoyl-(acyl-carrier-pro 45.2 28 0.00094 32.2 5.6 43 1-46 22-65 (296)
141 1kjn_A MTH0777; hypotethical p 45.0 13 0.00043 30.5 2.6 45 9-53 6-52 (157)
142 3ghy_A Ketopantoate reductase 44.7 12 0.00041 35.5 3.0 33 9-46 3-35 (335)
143 4grd_A N5-CAIR mutase, phospho 42.8 1.5E+02 0.005 24.9 8.8 145 287-471 12-165 (173)
144 3k96_A Glycerol-3-phosphate de 42.7 14 0.00048 35.4 3.1 37 5-46 25-61 (356)
145 1ydh_A AT5G11950; structural g 42.3 99 0.0034 27.1 8.3 44 350-394 89-143 (216)
146 3eag_A UDP-N-acetylmuramate:L- 42.2 25 0.00086 33.1 4.8 35 7-45 2-36 (326)
147 4dll_A 2-hydroxy-3-oxopropiona 41.1 29 0.001 32.5 5.0 32 8-44 30-61 (320)
148 3kuu_A Phosphoribosylaminoimid 40.8 1.6E+02 0.0055 24.7 9.5 144 289-472 14-166 (174)
149 1lss_A TRK system potassium up 40.8 26 0.00088 27.6 4.1 33 9-46 4-36 (140)
150 3ew7_A LMO0794 protein; Q8Y8U8 40.6 25 0.00084 30.4 4.2 33 10-46 1-33 (221)
151 3llv_A Exopolyphosphatase-rela 40.5 17 0.0006 29.0 3.0 33 9-46 6-38 (141)
152 2ae2_A Protein (tropinone redu 40.3 53 0.0018 29.4 6.6 41 1-45 1-41 (260)
153 2gk4_A Conserved hypothetical 40.1 47 0.0016 29.6 5.9 26 20-47 28-53 (232)
154 3lrx_A Putative hydrogenase; a 40.0 22 0.00077 29.4 3.6 37 9-48 23-59 (158)
155 3c5t_B Exendin-4, exenatide; l 39.8 25 0.00084 20.3 2.5 20 477-496 8-27 (31)
156 3o1l_A Formyltetrahydrofolate 39.7 75 0.0026 29.5 7.5 107 7-150 103-212 (302)
157 4g6h_A Rotenone-insensitive NA 39.6 16 0.00053 37.0 3.0 37 7-48 40-76 (502)
158 2q5c_A NTRC family transcripti 39.3 1.3E+02 0.0045 25.7 8.6 39 109-153 134-172 (196)
159 1p9o_A Phosphopantothenoylcyst 39.2 18 0.00063 33.9 3.2 38 10-47 37-89 (313)
160 4hb9_A Similarities with proba 38.9 20 0.00068 34.5 3.6 30 10-44 2-31 (412)
161 3hn2_A 2-dehydropantoate 2-red 38.7 37 0.0012 31.6 5.3 33 10-47 3-35 (312)
162 2r85_A PURP protein PF1517; AT 38.6 28 0.00096 32.5 4.6 33 9-47 2-34 (334)
163 4da9_A Short-chain dehydrogena 38.1 40 0.0014 30.7 5.4 34 9-45 28-61 (280)
164 1bg6_A N-(1-D-carboxylethyl)-L 38.0 22 0.00076 33.7 3.7 34 7-45 2-35 (359)
165 1e2b_A Enzyme IIB-cellobiose; 37.9 57 0.002 24.9 5.4 39 8-46 2-40 (106)
166 1rw7_A YDR533CP; alpha-beta sa 37.7 56 0.0019 29.1 6.2 38 10-47 4-52 (243)
167 3h2s_A Putative NADH-flavin re 37.7 29 0.00099 30.1 4.2 33 10-46 1-33 (224)
168 1hdo_A Biliverdin IX beta redu 37.7 34 0.0012 29.0 4.6 33 10-46 4-36 (206)
169 3e9m_A Oxidoreductase, GFO/IDH 37.7 2.1E+02 0.0073 26.4 10.7 112 289-419 8-127 (330)
170 3sxp_A ADP-L-glycero-D-mannohe 37.7 37 0.0013 32.1 5.3 37 6-46 7-45 (362)
171 3lp6_A Phosphoribosylaminoimid 37.4 1.8E+02 0.0063 24.4 11.5 142 288-472 8-159 (174)
172 2pju_A Propionate catabolism o 37.4 46 0.0016 29.5 5.4 67 367-448 64-153 (225)
173 3i83_A 2-dehydropantoate 2-red 37.2 36 0.0012 31.8 5.0 33 10-47 3-35 (320)
174 3kjh_A CO dehydrogenase/acetyl 37.2 24 0.00083 31.2 3.7 38 10-47 1-38 (254)
175 3lyu_A Putative hydrogenase; t 36.9 34 0.0012 27.6 4.2 36 9-47 18-53 (142)
176 2qyt_A 2-dehydropantoate 2-red 36.7 13 0.00043 34.8 1.7 36 5-45 4-45 (317)
177 2b4q_A Rhamnolipids biosynthes 36.6 61 0.0021 29.4 6.4 40 1-44 21-60 (276)
178 2g1u_A Hypothetical protein TM 36.5 38 0.0013 27.6 4.5 34 8-46 18-51 (155)
179 3hwr_A 2-dehydropantoate 2-red 36.4 22 0.00075 33.3 3.3 31 8-43 18-48 (318)
180 3vps_A TUNA, NAD-dependent epi 35.9 27 0.00091 32.3 3.9 34 9-46 7-40 (321)
181 3l49_A ABC sugar (ribose) tran 35.9 2.2E+02 0.0076 25.2 10.3 41 6-46 2-44 (291)
182 3ak4_A NADH-dependent quinucli 35.9 64 0.0022 28.8 6.4 36 6-45 9-44 (263)
183 2vou_A 2,6-dihydroxypyridine h 35.9 28 0.00097 33.5 4.2 34 7-45 3-36 (397)
184 2q5c_A NTRC family transcripti 35.8 39 0.0013 29.2 4.6 30 365-395 50-79 (196)
185 3tjr_A Short chain dehydrogena 35.8 47 0.0016 30.6 5.5 32 11-45 32-63 (301)
186 1xgk_A Nitrogen metabolite rep 34.8 29 0.001 33.0 4.0 36 7-46 3-38 (352)
187 3obi_A Formyltetrahydrofolate 34.8 1.4E+02 0.0048 27.4 8.5 108 7-150 87-197 (288)
188 1wcv_1 SOJ, segregation protei 34.7 31 0.0011 30.9 4.0 40 9-48 5-46 (257)
189 1kjq_A GART 2, phosphoribosylg 34.6 63 0.0022 30.9 6.5 40 4-48 6-45 (391)
190 1uan_A Hypothetical protein TT 34.5 1.8E+02 0.006 25.5 8.9 22 105-128 82-103 (227)
191 2wsb_A Galactitol dehydrogenas 34.3 66 0.0022 28.4 6.2 36 6-45 8-43 (254)
192 2vo1_A CTP synthase 1; pyrimid 34.3 43 0.0015 30.5 4.6 41 7-47 20-63 (295)
193 2r6j_A Eugenol synthase 1; phe 34.3 32 0.0011 31.9 4.1 33 11-47 13-45 (318)
194 3e18_A Oxidoreductase; dehydro 34.2 2.2E+02 0.0076 26.7 10.2 110 289-419 8-125 (359)
195 3fwz_A Inner membrane protein 34.1 20 0.0007 28.7 2.4 33 9-46 7-39 (140)
196 3i6i_A Putative leucoanthocyan 33.8 28 0.00094 32.8 3.6 37 7-47 8-44 (346)
197 3qjg_A Epidermin biosynthesis 33.8 1.6E+02 0.0055 24.7 8.0 111 289-411 8-141 (175)
198 4hcj_A THIJ/PFPI domain protei 33.3 39 0.0013 28.6 4.1 43 4-47 3-45 (177)
199 1ehi_A LMDDL2, D-alanine:D-lac 33.1 38 0.0013 32.6 4.5 39 8-46 2-45 (377)
200 3g0o_A 3-hydroxyisobutyrate de 33.0 24 0.00083 32.7 3.0 33 7-44 5-37 (303)
201 1dhr_A Dihydropteridine reduct 32.9 41 0.0014 29.7 4.5 32 11-45 8-39 (241)
202 2ew2_A 2-dehydropantoate 2-red 32.5 30 0.001 31.9 3.6 32 9-45 3-34 (316)
203 1qkk_A DCTD, C4-dicarboxylate 32.3 1.1E+02 0.0038 24.2 6.8 48 385-448 74-121 (155)
204 1o97_C Electron transferring f 32.1 52 0.0018 29.9 5.0 42 107-150 101-148 (264)
205 4b4k_A N5-carboxyaminoimidazol 32.1 2.3E+02 0.0079 23.9 10.5 148 287-472 22-176 (181)
206 2fb6_A Conserved hypothetical 32.0 47 0.0016 25.9 4.1 37 10-46 8-48 (117)
207 1gz6_A Estradiol 17 beta-dehyd 32.0 71 0.0024 29.7 6.1 40 1-44 1-40 (319)
208 3bul_A Methionine synthase; tr 32.0 38 0.0013 34.7 4.4 45 8-52 97-141 (579)
209 3e8x_A Putative NAD-dependent 31.9 42 0.0014 29.4 4.3 35 8-46 20-54 (236)
210 3ksu_A 3-oxoacyl-acyl carrier 31.9 83 0.0028 28.2 6.4 32 11-45 12-43 (262)
211 3lqk_A Dipicolinate synthase s 31.8 2.5E+02 0.0085 24.2 9.2 147 289-448 10-186 (201)
212 1pno_A NAD(P) transhydrogenase 31.7 50 0.0017 27.5 4.2 35 10-46 24-63 (180)
213 3ruf_A WBGU; rossmann fold, UD 31.7 23 0.0008 33.3 2.7 35 8-46 24-58 (351)
214 2zts_A Putative uncharacterize 31.4 33 0.0011 30.3 3.5 43 11-53 32-75 (251)
215 3qua_A Putative uncharacterize 31.4 1.2E+02 0.0043 26.1 7.0 103 285-392 20-153 (199)
216 1d4o_A NADP(H) transhydrogenas 31.3 51 0.0018 27.6 4.2 37 10-46 23-62 (184)
217 3nrb_A Formyltetrahydrofolate 31.0 2.2E+02 0.0075 26.1 9.1 108 7-150 86-196 (287)
218 2gdz_A NAD+-dependent 15-hydro 30.9 84 0.0029 28.1 6.3 39 1-45 1-39 (267)
219 3euw_A MYO-inositol dehydrogen 30.6 2.8E+02 0.0095 25.7 10.2 111 289-419 7-125 (344)
220 1efv_B Electron transfer flavo 30.3 58 0.002 29.4 5.0 42 107-150 105-152 (255)
221 3q2i_A Dehydrogenase; rossmann 29.9 2.9E+02 0.0098 25.8 10.2 131 288-452 15-154 (354)
222 2dwc_A PH0318, 433AA long hypo 29.8 82 0.0028 30.7 6.4 36 8-48 18-53 (433)
223 3lou_A Formyltetrahydrofolate 29.7 1.1E+02 0.0039 28.1 6.9 107 7-150 93-202 (292)
224 1jx7_A Hypothetical protein YC 29.5 46 0.0016 25.4 3.7 29 20-48 15-45 (117)
225 2pn1_A Carbamoylphosphate synt 29.3 64 0.0022 29.9 5.4 35 7-47 2-38 (331)
226 4e5v_A Putative THUA-like prot 29.2 57 0.002 30.0 4.8 38 8-46 3-43 (281)
227 1e4e_A Vancomycin/teicoplanin 29.2 33 0.0011 32.4 3.3 39 8-46 2-44 (343)
228 2h31_A Multifunctional protein 29.1 3.1E+02 0.011 26.7 10.1 143 287-472 265-415 (425)
229 1qyd_A Pinoresinol-lariciresin 29.1 42 0.0014 30.8 3.9 33 10-46 5-37 (313)
230 2fsv_C NAD(P) transhydrogenase 29.0 57 0.002 27.8 4.2 35 10-46 47-86 (203)
231 2hy5_A Putative sulfurtransfer 29.0 69 0.0024 25.3 4.7 35 13-47 5-42 (130)
232 1xp8_A RECA protein, recombina 29.0 1.2E+02 0.0042 28.9 7.3 41 11-51 76-116 (366)
233 2a5l_A Trp repressor binding p 29.0 66 0.0023 27.2 5.0 38 9-46 5-43 (200)
234 3h7a_A Short chain dehydrogena 29.0 1.4E+02 0.0047 26.4 7.4 32 11-45 8-39 (252)
235 3ors_A N5-carboxyaminoimidazol 28.8 2.5E+02 0.0086 23.3 9.7 141 289-471 5-156 (163)
236 3dqp_A Oxidoreductase YLBE; al 28.7 41 0.0014 29.1 3.6 32 11-46 2-33 (219)
237 2ehd_A Oxidoreductase, oxidore 28.5 62 0.0021 28.2 4.9 31 12-45 7-37 (234)
238 2xj4_A MIPZ; replication, cell 28.4 60 0.002 29.6 4.9 37 11-47 5-43 (286)
239 1efp_B ETF, protein (electron 28.4 58 0.002 29.4 4.6 41 108-150 103-149 (252)
240 3rkr_A Short chain oxidoreduct 28.3 71 0.0024 28.6 5.3 33 11-46 30-62 (262)
241 1z7e_A Protein aRNA; rossmann 28.2 83 0.0029 32.7 6.5 38 111-150 68-106 (660)
242 1djl_A Transhydrogenase DIII; 28.2 60 0.0021 27.8 4.2 35 10-46 46-85 (207)
243 1z82_A Glycerol-3-phosphate de 28.1 41 0.0014 31.6 3.7 32 9-45 14-45 (335)
244 3c24_A Putative oxidoreductase 27.8 50 0.0017 30.2 4.2 30 10-44 12-42 (286)
245 1q57_A DNA primase/helicase; d 27.7 2.8E+02 0.0096 27.5 10.1 41 12-52 245-286 (503)
246 1vdc_A NTR, NADPH dependent th 27.6 20 0.00069 33.4 1.4 39 1-45 1-39 (333)
247 1xq1_A Putative tropinone redu 27.5 1.1E+02 0.0037 27.2 6.5 35 7-45 12-46 (266)
248 3qvl_A Putative hydantoin race 27.5 3.2E+02 0.011 24.1 10.0 28 120-147 69-97 (245)
249 3ug7_A Arsenical pump-driving 27.4 80 0.0027 29.9 5.7 40 9-48 25-65 (349)
250 3dhn_A NAD-dependent epimerase 27.4 45 0.0015 28.9 3.7 33 10-46 5-37 (227)
251 2hq1_A Glucose/ribitol dehydro 27.4 71 0.0024 28.0 5.1 34 7-44 3-36 (247)
252 2c29_D Dihydroflavonol 4-reduc 27.3 57 0.0019 30.3 4.6 33 9-45 5-37 (337)
253 3slg_A PBGP3 protein; structur 27.3 43 0.0015 31.8 3.8 36 7-46 22-58 (372)
254 2z1m_A GDP-D-mannose dehydrata 27.2 48 0.0016 30.8 4.0 34 9-46 3-36 (345)
255 1yde_A Retinal dehydrogenase/r 27.2 1E+02 0.0036 27.6 6.2 41 1-45 1-41 (270)
256 3trh_A Phosphoribosylaminoimid 27.1 2.7E+02 0.0094 23.2 11.9 145 288-472 7-160 (169)
257 3o26_A Salutaridine reductase; 27.0 62 0.0021 29.5 4.8 35 9-46 11-45 (311)
258 2r6a_A DNAB helicase, replicat 26.9 2.8E+02 0.0096 27.1 9.8 42 11-52 205-247 (454)
259 2o3j_A UDP-glucose 6-dehydroge 26.9 58 0.002 32.5 4.8 39 1-44 1-41 (481)
260 2i87_A D-alanine-D-alanine lig 26.9 31 0.0011 32.9 2.6 39 8-46 2-44 (364)
261 1sby_A Alcohol dehydrogenase; 26.9 97 0.0033 27.4 5.9 36 7-46 3-39 (254)
262 3n0v_A Formyltetrahydrofolate 26.8 2E+02 0.0067 26.4 8.0 111 5-150 86-197 (286)
263 1y1p_A ARII, aldehyde reductas 26.7 69 0.0024 29.6 5.1 34 8-45 10-43 (342)
264 3l7i_A Teichoic acid biosynthe 26.6 1.3E+02 0.0044 31.7 7.7 116 352-487 603-718 (729)
265 2w36_A Endonuclease V; hypoxan 26.6 45 0.0016 29.5 3.4 41 110-150 93-140 (225)
266 1qyc_A Phenylcoumaran benzylic 26.5 49 0.0017 30.2 3.9 33 10-46 5-37 (308)
267 2dpo_A L-gulonate 3-dehydrogen 26.5 42 0.0014 31.5 3.4 35 7-46 4-38 (319)
268 3uf0_A Short-chain dehydrogena 26.3 1.2E+02 0.004 27.4 6.4 32 11-45 32-63 (273)
269 3sty_A Methylketone synthase 1 26.3 54 0.0018 28.6 4.1 36 11-46 13-48 (267)
270 3f67_A Putative dienelactone h 26.3 76 0.0026 27.1 5.0 38 9-46 31-68 (241)
271 3tl4_X Glutaminyl-tRNA synthet 26.2 1.5E+02 0.0052 25.2 6.5 60 433-493 117-183 (187)
272 3lyh_A Cobalamin (vitamin B12) 26.2 2.3E+02 0.0077 21.9 7.8 36 287-322 6-41 (126)
273 3l6d_A Putative oxidoreductase 26.2 41 0.0014 31.2 3.3 32 8-44 8-39 (306)
274 3s2u_A UDP-N-acetylglucosamine 26.1 93 0.0032 29.5 5.9 27 364-392 92-121 (365)
275 3tqr_A Phosphoribosylglycinami 26.1 3.1E+02 0.011 23.8 8.8 69 306-395 73-141 (215)
276 3k9g_A PF-32 protein; ssgcid, 26.0 61 0.0021 29.0 4.4 40 8-48 25-66 (267)
277 3qsg_A NAD-binding phosphogluc 25.9 37 0.0013 31.7 2.9 34 7-45 22-56 (312)
278 2qx0_A 7,8-dihydro-6-hydroxyme 25.9 84 0.0029 26.1 4.7 28 289-316 3-30 (159)
279 1f9y_A HPPK, protein (6-hydrox 25.9 64 0.0022 26.8 4.0 28 289-316 2-29 (158)
280 4hkt_A Inositol 2-dehydrogenas 25.8 3.2E+02 0.011 25.1 9.6 110 289-419 6-123 (331)
281 3alj_A 2-methyl-3-hydroxypyrid 25.7 47 0.0016 31.6 3.7 34 7-45 9-42 (379)
282 3m1a_A Putative dehydrogenase; 25.6 72 0.0025 28.8 4.9 33 11-46 6-38 (281)
283 3db2_A Putative NADPH-dependen 25.6 2E+02 0.0069 26.9 8.2 111 289-419 8-126 (354)
284 2pzm_A Putative nucleotide sug 25.6 58 0.002 30.2 4.3 35 7-45 18-52 (330)
285 3sbx_A Putative uncharacterize 25.5 89 0.0031 26.7 5.0 38 8-46 12-53 (189)
286 3enk_A UDP-glucose 4-epimerase 25.4 62 0.0021 30.1 4.5 33 9-45 5-37 (341)
287 3ahc_A Phosphoketolase, xylulo 25.4 5.2E+02 0.018 27.7 11.7 42 433-475 772-813 (845)
288 3o1l_A Formyltetrahydrofolate 25.3 3.6E+02 0.012 24.8 9.5 71 304-395 169-239 (302)
289 3ppi_A 3-hydroxyacyl-COA dehyd 25.3 74 0.0025 28.7 4.9 33 10-45 30-62 (281)
290 2bru_C NAD(P) transhydrogenase 25.2 58 0.002 27.2 3.5 35 10-46 31-70 (186)
291 2e6c_A 5'-nucleotidase SURE; S 25.1 80 0.0027 28.3 4.8 41 10-52 1-41 (244)
292 1ks9_A KPA reductase;, 2-dehyd 25.1 49 0.0017 30.0 3.6 32 10-46 1-32 (291)
293 2hmt_A YUAA protein; RCK, KTN, 25.1 43 0.0015 26.4 2.9 33 9-46 6-38 (144)
294 1pjq_A CYSG, siroheme synthase 25.0 1.3E+02 0.0043 29.8 6.8 147 287-469 13-168 (457)
295 3kcq_A Phosphoribosylglycinami 25.0 3.2E+02 0.011 23.7 8.6 69 306-395 72-140 (215)
296 3s55_A Putative short-chain de 24.8 82 0.0028 28.4 5.1 33 11-46 11-43 (281)
297 2x3n_A Probable FAD-dependent 24.8 41 0.0014 32.3 3.1 35 7-46 4-38 (399)
298 2x5n_A SPRPN10, 26S proteasome 24.8 97 0.0033 26.4 5.2 34 12-45 110-143 (192)
299 3l4b_C TRKA K+ channel protien 24.8 31 0.0011 30.0 2.0 32 10-46 1-32 (218)
300 3nrb_A Formyltetrahydrofolate 24.8 2.1E+02 0.0073 26.1 7.8 69 306-395 155-223 (287)
301 3ius_A Uncharacterized conserv 24.7 63 0.0021 29.1 4.2 32 10-46 6-37 (286)
302 3hr8_A Protein RECA; alpha and 24.5 2E+02 0.007 27.2 7.9 39 12-50 64-102 (356)
303 3of5_A Dethiobiotin synthetase 24.5 86 0.0029 27.6 4.9 34 11-44 6-40 (228)
304 3pk0_A Short-chain dehydrogena 24.4 1.1E+02 0.0036 27.4 5.7 32 11-45 11-42 (262)
305 2lpm_A Two-component response 24.4 64 0.0022 25.3 3.7 34 113-148 48-86 (123)
306 3bbn_B Ribosomal protein S2; s 24.3 43 0.0015 29.8 2.8 33 119-151 156-190 (231)
307 1u7z_A Coenzyme A biosynthesis 24.3 1.3E+02 0.0046 26.4 6.1 22 25-46 36-57 (226)
308 2zki_A 199AA long hypothetical 24.3 72 0.0024 27.0 4.3 37 9-46 4-41 (199)
309 3btv_A Galactose/lactose metab 24.3 64 0.0022 31.7 4.4 41 1-46 12-58 (438)
310 2an1_A Putative kinase; struct 24.2 40 0.0014 31.1 2.7 30 362-393 61-94 (292)
311 3doj_A AT3G25530, dehydrogenas 24.1 64 0.0022 29.9 4.2 33 8-45 20-52 (310)
312 2d1p_B TUSC, hypothetical UPF0 24.0 1E+02 0.0035 23.9 4.8 36 12-47 5-42 (119)
313 2rdm_A Response regulator rece 24.0 1.4E+02 0.0047 22.6 5.7 36 5-44 1-36 (132)
314 3gem_A Short chain dehydrogena 24.0 64 0.0022 28.9 4.1 33 11-46 28-60 (260)
315 3un1_A Probable oxidoreductase 24.0 35 0.0012 30.8 2.2 32 11-45 29-60 (260)
316 3l77_A Short-chain alcohol deh 23.9 81 0.0028 27.5 4.7 33 11-46 3-35 (235)
317 3ucx_A Short chain dehydrogena 23.8 1E+02 0.0035 27.5 5.5 32 11-45 12-43 (264)
318 1rkx_A CDP-glucose-4,6-dehydra 23.8 36 0.0012 32.1 2.4 35 8-46 8-42 (357)
319 3u7q_A Nitrogenase molybdenum- 23.8 60 0.0021 32.6 4.1 34 109-147 408-441 (492)
320 1j9j_A Stationary phase surviV 23.8 86 0.0029 28.1 4.7 41 10-52 1-41 (247)
321 1b93_A Protein (methylglyoxal 23.7 1.5E+02 0.0052 24.3 5.9 94 10-146 12-118 (152)
322 4e3z_A Putative oxidoreductase 23.7 82 0.0028 28.3 4.8 36 7-45 23-58 (272)
323 3pnx_A Putative sulfurtransfer 23.6 1.1E+02 0.0038 25.4 5.1 41 13-53 9-49 (160)
324 2zbw_A Thioredoxin reductase; 23.6 48 0.0016 30.8 3.3 36 7-47 3-38 (335)
325 1o4v_A Phosphoribosylaminoimid 23.6 3.3E+02 0.011 23.0 11.9 142 288-472 14-165 (183)
326 3k5i_A Phosphoribosyl-aminoimi 23.6 1.1E+02 0.0037 29.6 5.9 37 1-44 18-54 (403)
327 3pxx_A Carveol dehydrogenase; 23.4 94 0.0032 28.0 5.2 33 11-46 11-43 (287)
328 3ewn_A THIJ/PFPI family protei 23.4 1.1E+02 0.0038 27.4 5.6 46 1-47 11-61 (253)
329 2zat_A Dehydrogenase/reductase 23.4 98 0.0034 27.5 5.3 32 11-45 15-46 (260)
330 4id9_A Short-chain dehydrogena 23.4 52 0.0018 30.7 3.5 35 8-46 18-52 (347)
331 3i12_A D-alanine-D-alanine lig 23.4 49 0.0017 31.6 3.3 40 7-46 1-44 (364)
332 2raf_A Putative dinucleotide-b 23.4 60 0.002 28.1 3.6 33 8-45 18-50 (209)
333 1e7w_A Pteridine reductase; di 23.2 85 0.0029 28.6 4.9 31 11-44 10-40 (291)
334 4eso_A Putative oxidoreductase 23.2 94 0.0032 27.6 5.1 32 11-45 9-40 (255)
335 2b69_A UDP-glucuronate decarbo 23.1 69 0.0024 29.8 4.3 36 7-46 25-60 (343)
336 4huj_A Uncharacterized protein 23.1 37 0.0013 29.7 2.2 33 7-44 21-53 (220)
337 1cyd_A Carbonyl reductase; sho 23.1 90 0.0031 27.2 4.9 35 7-45 5-39 (244)
338 3ip0_A 2-amino-4-hydroxy-6-hyd 23.0 77 0.0026 26.2 4.0 28 289-316 2-29 (158)
339 1yt5_A Inorganic polyphosphate 23.0 29 0.00098 31.5 1.4 26 368-393 43-71 (258)
340 2v4n_A Multifunctional protein 23.0 94 0.0032 28.0 4.8 41 10-52 2-42 (254)
341 3zq6_A Putative arsenical pump 23.0 97 0.0033 28.9 5.3 38 10-47 14-52 (324)
342 3v2h_A D-beta-hydroxybutyrate 23.0 83 0.0028 28.5 4.7 32 11-45 26-57 (281)
343 3m2t_A Probable dehydrogenase; 22.9 2.6E+02 0.0091 26.2 8.5 113 289-419 8-128 (359)
344 4e12_A Diketoreductase; oxidor 22.9 69 0.0024 29.2 4.1 32 9-45 4-35 (283)
345 4g65_A TRK system potassium up 22.9 24 0.00082 35.2 1.0 40 8-54 2-41 (461)
346 1ydn_A Hydroxymethylglutaryl-C 22.8 4.3E+02 0.015 23.9 10.4 26 300-325 23-48 (295)
347 3czc_A RMPB; alpha/beta sandwi 22.6 85 0.0029 24.0 4.0 37 8-44 17-55 (110)
348 2pd4_A Enoyl-[acyl-carrier-pro 22.6 1E+02 0.0035 27.7 5.2 34 11-46 7-41 (275)
349 1gsa_A Glutathione synthetase; 22.6 64 0.0022 29.5 3.9 37 10-46 2-41 (316)
350 3qbc_A 2-amino-4-hydroxy-6-hyd 22.5 78 0.0027 26.3 3.9 28 289-316 6-33 (161)
351 1u0t_A Inorganic polyphosphate 22.5 33 0.0011 32.0 1.8 30 363-394 74-107 (307)
352 1cbk_A Protein (7,8-dihydro-6- 22.5 81 0.0028 26.2 4.0 28 289-316 3-30 (160)
353 3e5n_A D-alanine-D-alanine lig 22.4 52 0.0018 31.8 3.3 41 6-46 19-63 (386)
354 1xmp_A PURE, phosphoribosylami 22.4 3.4E+02 0.012 22.6 12.2 146 287-472 11-165 (170)
355 3rd5_A Mypaa.01249.C; ssgcid, 22.3 82 0.0028 28.6 4.6 32 11-45 17-48 (291)
356 3qha_A Putative oxidoreductase 22.2 46 0.0016 30.7 2.8 32 9-45 15-46 (296)
357 3c1o_A Eugenol synthase; pheny 22.2 70 0.0024 29.4 4.1 34 10-47 5-38 (321)
358 1zi8_A Carboxymethylenebutenol 22.1 1.1E+02 0.0036 26.1 5.1 37 9-45 27-63 (236)
359 2ag5_A DHRS6, dehydrogenase/re 22.1 1.3E+02 0.0046 26.3 5.8 32 11-45 7-38 (246)
360 1iow_A DD-ligase, DDLB, D-ALA\ 22.0 1.3E+02 0.0046 27.2 6.0 38 9-46 2-43 (306)
361 4hn9_A Iron complex transport 22.0 60 0.002 30.4 3.6 37 110-149 109-145 (335)
362 1w6u_A 2,4-dienoyl-COA reducta 21.9 1.6E+02 0.0056 26.6 6.6 36 7-46 24-59 (302)
363 3pgx_A Carveol dehydrogenase; 21.7 1E+02 0.0035 27.7 5.1 32 11-45 16-47 (280)
364 3bfv_A CAPA1, CAPB2, membrane 21.7 98 0.0034 28.0 4.9 42 8-49 80-123 (271)
365 3f1l_A Uncharacterized oxidore 21.5 1.4E+02 0.0047 26.4 5.8 32 11-45 13-44 (252)
366 3lyl_A 3-oxoacyl-(acyl-carrier 21.5 1.1E+02 0.0039 26.7 5.3 33 11-46 6-38 (247)
367 4ezb_A Uncharacterized conserv 21.5 45 0.0015 31.2 2.5 33 9-46 24-57 (317)
368 3gaf_A 7-alpha-hydroxysteroid 21.4 96 0.0033 27.6 4.7 32 11-45 13-44 (256)
369 2woo_A ATPase GET3; tail-ancho 21.4 97 0.0033 29.0 4.9 39 10-48 19-58 (329)
370 2a4k_A 3-oxoacyl-[acyl carrier 21.4 1.1E+02 0.0037 27.4 5.1 32 11-45 7-38 (263)
371 3p19_A BFPVVD8, putative blue 21.4 83 0.0028 28.3 4.3 32 11-45 17-48 (266)
372 2hy5_B Intracellular sulfur ox 21.3 88 0.003 25.1 3.9 37 11-47 7-46 (136)
373 3obi_A Formyltetrahydrofolate 21.3 2.8E+02 0.0097 25.3 7.9 69 306-395 156-224 (288)
374 3kkj_A Amine oxidase, flavin-c 21.3 51 0.0017 28.8 2.9 29 12-45 5-33 (336)
375 1l5x_A SurviVal protein E; str 21.3 1E+02 0.0034 28.3 4.7 41 10-52 1-41 (280)
376 3p9x_A Phosphoribosylglycinami 21.3 4E+02 0.014 23.0 8.8 69 306-395 71-139 (211)
377 2q62_A ARSH; alpha/beta, flavo 21.3 1.1E+02 0.0038 27.3 5.0 38 7-44 32-72 (247)
378 3sju_A Keto reductase; short-c 21.2 88 0.003 28.3 4.5 33 10-45 24-56 (279)
379 2c5a_A GDP-mannose-3', 5'-epim 21.2 92 0.0032 29.6 4.8 35 8-46 28-62 (379)
380 3lf2_A Short chain oxidoreduct 21.2 1.2E+02 0.004 27.2 5.3 32 11-45 9-40 (265)
381 1spx_A Short-chain reductase f 21.2 1.3E+02 0.0044 26.9 5.7 32 11-45 7-38 (278)
382 4fs3_A Enoyl-[acyl-carrier-pro 21.1 1.1E+02 0.0038 27.2 5.1 34 11-45 7-40 (256)
383 3icc_A Putative 3-oxoacyl-(acy 21.1 4E+02 0.014 23.0 11.4 34 10-46 7-40 (255)
384 1byi_A Dethiobiotin synthase; 21.0 97 0.0033 26.6 4.6 33 11-43 3-36 (224)
385 1v0j_A UDP-galactopyranose mut 21.0 79 0.0027 30.5 4.3 39 1-46 1-40 (399)
386 3o38_A Short chain dehydrogena 20.9 1.1E+02 0.0038 27.2 5.1 34 11-46 23-56 (266)
387 3t4x_A Oxidoreductase, short c 20.9 1.3E+02 0.0045 26.8 5.6 32 11-45 11-42 (267)
388 4fu0_A D-alanine--D-alanine li 20.9 59 0.002 30.9 3.3 38 7-44 1-42 (357)
389 4e21_A 6-phosphogluconate dehy 20.8 69 0.0024 30.6 3.7 33 8-45 21-53 (358)
390 3cky_A 2-hydroxymethyl glutara 20.8 98 0.0033 28.2 4.8 31 9-44 4-34 (301)
391 3uug_A Multiple sugar-binding 20.8 4.6E+02 0.016 23.5 11.3 31 120-150 59-93 (330)
392 3guy_A Short-chain dehydrogena 20.8 79 0.0027 27.5 3.9 32 11-45 2-33 (230)
393 2o23_A HADH2 protein; HSD17B10 20.7 1.1E+02 0.0036 27.2 4.9 36 7-46 10-45 (265)
394 1xrs_B D-lysine 5,6-aminomutas 20.7 48 0.0016 30.1 2.4 45 8-52 119-172 (262)
395 3uxy_A Short-chain dehydrogena 20.7 1.1E+02 0.0037 27.5 5.0 31 11-44 29-59 (266)
396 2d1y_A Hypothetical protein TT 20.6 1.3E+02 0.0045 26.6 5.5 35 8-46 5-39 (256)
397 3ip3_A Oxidoreductase, putativ 20.6 3.4E+02 0.012 25.1 8.7 65 354-418 55-128 (337)
398 2x4g_A Nucleoside-diphosphate- 20.6 88 0.003 29.0 4.5 34 9-46 13-46 (342)
399 1ja9_A 4HNR, 1,3,6,8-tetrahydr 20.6 1.2E+02 0.0041 27.0 5.2 34 8-45 20-53 (274)
400 3i4f_A 3-oxoacyl-[acyl-carrier 20.6 1.2E+02 0.0041 26.8 5.3 34 10-46 7-40 (264)
401 2l2q_A PTS system, cellobiose- 20.6 1.2E+02 0.0041 23.0 4.5 36 9-44 4-39 (109)
402 3u9l_A 3-oxoacyl-[acyl-carrier 20.5 1.7E+02 0.0059 27.1 6.5 31 11-44 6-36 (324)
403 1tvm_A PTS system, galactitol- 20.5 1.7E+02 0.0058 22.4 5.3 37 8-44 20-57 (113)
404 2bi7_A UDP-galactopyranose mut 20.5 1.1E+02 0.0037 29.3 5.2 33 9-46 3-35 (384)
405 3dtt_A NADP oxidoreductase; st 20.5 80 0.0027 28.0 3.9 34 8-46 18-51 (245)
406 3oh8_A Nucleoside-diphosphate 20.4 83 0.0028 31.6 4.5 34 9-46 147-180 (516)
407 2etv_A Iron(III) ABC transport 20.4 80 0.0027 29.7 4.1 36 110-148 89-125 (346)
408 3r6d_A NAD-dependent epimerase 20.4 1.2E+02 0.0041 25.9 5.1 31 12-46 8-39 (221)
409 3md9_A Hemin-binding periplasm 20.4 77 0.0026 28.1 3.8 36 110-148 52-89 (255)
410 1ihu_A Arsenical pump-driving 20.4 86 0.0029 32.1 4.6 39 9-47 7-46 (589)
411 2uyy_A N-PAC protein; long-cha 20.4 76 0.0026 29.3 3.9 33 8-45 29-61 (316)
412 3goc_A Endonuclease V; alpha-b 20.4 1.2E+02 0.0043 26.8 4.9 39 110-148 97-142 (237)
413 3auf_A Glycinamide ribonucleot 20.4 4.3E+02 0.015 23.1 9.2 69 306-395 91-159 (229)
414 1e6u_A GDP-fucose synthetase; 20.3 54 0.0018 30.2 2.9 32 9-44 3-34 (321)
415 3lou_A Formyltetrahydrofolate 20.3 3.1E+02 0.011 25.1 7.9 69 306-395 161-229 (292)
416 3ko8_A NAD-dependent epimerase 20.3 77 0.0026 28.9 3.9 31 11-45 2-32 (312)
417 3d7l_A LIN1944 protein; APC893 20.3 91 0.0031 26.3 4.1 32 9-45 3-34 (202)
418 3f6r_A Flavodoxin; FMN binding 20.3 1E+02 0.0035 24.5 4.3 37 11-47 3-40 (148)
419 3evn_A Oxidoreductase, GFO/IDH 20.2 5E+02 0.017 23.7 11.7 111 289-418 8-126 (329)
420 3d3w_A L-xylulose reductase; u 20.2 1.2E+02 0.004 26.5 5.0 35 7-45 5-39 (244)
421 2wm3_A NMRA-like family domain 20.2 70 0.0024 29.1 3.6 35 9-47 5-40 (299)
422 3lzw_A Ferredoxin--NADP reduct 20.1 33 0.0011 31.7 1.3 34 9-47 7-40 (332)
423 1fjh_A 3alpha-hydroxysteroid d 20.1 1.2E+02 0.0039 26.8 5.0 32 11-45 2-33 (257)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.6e-66 Score=529.09 Aligned_cols=432 Identities=26% Similarity=0.436 Sum_probs=350.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCC--CeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHG--IKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
.+++||+++|+|++||++|++.||+.|+++| +.|||++++.+..++.+... ....+++|+.+| ++++++.
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dglp~~~ 82 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGLPKGY 82 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCCCTTC
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCCCCCc
Confidence 3578999999999999999999999999999 99999999866655433210 113479999997 4777766
Q ss_pred CCCCCCCChhHHHHHHHHH-HHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhhhhhhh
Q 010940 85 ENMDKLPSRDLIKNFFHAA-SMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCTHKLEI 163 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 163 (497)
+.... ....+..+.... ..+.+.+++++++...++|+||+|.+++|+..+|+++|||++.+++++++.+..+++...
T Consensus 83 ~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 83 VSSGN--PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp CCCSC--TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cccCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 55443 223344444444 455666777766644589999999999999999999999999999999998877665432
Q ss_pred c--cC-----CCCcc-cccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHH
Q 010940 164 S--KV-----SKFES-FVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEY 235 (497)
Q Consensus 164 ~--~~-----~~~~~-~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~ 235 (497)
. .. ..... ..+||+|. ++.++++.++.. . ....+..+..+..+...+++++++|||++||+++++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~-~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~ 235 (454)
T 3hbf_A 161 IREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-D-IDVPFATMLHKMGLELPRANAVAINSFATIHPLIENEL 235 (454)
T ss_dssp HHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-C-TTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred HHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-C-CchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHH
Confidence 1 10 11222 34899986 888899988764 2 12235566677777778899999999999999999988
Q ss_pred HhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHHhC
Q 010940 236 KRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLEAS 315 (497)
Q Consensus 236 ~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~ 315 (497)
+..+ +++++|||++...+. .....++++.+||+..+++++|||||||+...+.+++.+++++|+.+
T Consensus 236 ~~~~-~~v~~vGPl~~~~~~-------------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~ 301 (454)
T 3hbf_A 236 NSKF-KLLLNVGPFNLTTPQ-------------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEEC 301 (454)
T ss_dssp HTTS-SCEEECCCHHHHSCC-------------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH
T ss_pred HhcC-CCEEEECCccccccc-------------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 8766 799999999654321 11223578999999988889999999999998899999999999999
Q ss_pred CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeecccc
Q 010940 316 SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLF 395 (497)
Q Consensus 316 ~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~ 395 (497)
+++|||+++...... +|++|.++.. +|+++.+|+||.++|+|+++++|||||||||++||+++|||+|++|++
T Consensus 302 ~~~flw~~~~~~~~~------lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~ 374 (454)
T 3hbf_A 302 GFPFIWSFRGDPKEK------LPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFF 374 (454)
T ss_dssp CCCEEEECCSCHHHH------SCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CCeEEEEeCCcchhc------CCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccc
Confidence 999999998754321 7788876654 788888999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCC
Q 010940 396 AEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGS 475 (497)
Q Consensus 396 ~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~ 475 (497)
+||+.||+++++.+|+|+.++... +++++|.++|+++|+| +++++||+||+++++++++++++|||
T Consensus 375 ~DQ~~Na~~v~~~~g~Gv~l~~~~-------------~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGs 440 (454)
T 3hbf_A 375 GDQGLNTILTESVLEIGVGVDNGV-------------LTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGT 440 (454)
T ss_dssp TTHHHHHHHHHTTSCSEEECGGGS-------------CCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSH
T ss_pred ccHHHHHHHHHHhhCeeEEecCCC-------------CCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCC
Confidence 999999999955469999998765 8999999999999986 44568999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q 010940 476 SHRNIEMLIEFVI 488 (497)
Q Consensus 476 ~~~~~~~~~~~~~ 488 (497)
|.+++++||+++.
T Consensus 441 S~~~l~~~v~~i~ 453 (454)
T 3hbf_A 441 SAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4.5e-60 Score=489.38 Aligned_cols=441 Identities=28% Similarity=0.430 Sum_probs=327.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCCCC--cchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEH-GIKVTIVTTPLN--TTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQG 83 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~ 83 (497)
.+++||+++|+|++||++|++.||++|++| ||+|||++++.+ ...+++... ....+++|+.+|... .+..
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~----~~~~ 76 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD----LTDL 76 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----CTTS
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----CCCC
Confidence 356899999999999999999999999998 999999999874 444443210 113489999997531 1111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhc--CCCC-cEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhhhh
Q 010940 84 CENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKL--HPRP-SCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCTHK 160 (497)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~~~p-DlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 160 (497)
.... .....+......+...+++++++. ..++ |+||+|.+..|+..+|+++|||++.++++++.....+++
T Consensus 77 ----~~~~--~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 150 (480)
T 2vch_A 77 ----SSST--RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLH 150 (480)
T ss_dssp ----CTTC--CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHH
T ss_pred ----CCch--hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHH
Confidence 1111 122233344455556677777652 2378 999999999999999999999999999998876655443
Q ss_pred hhhc---cCCC----CcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHH
Q 010940 161 LEIS---KVSK----FESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVK 233 (497)
Q Consensus 161 ~~~~---~~~~----~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~ 233 (497)
+... ...+ .....+|++++ +...+++..+.... .. +...+.+......+.+++++|++.++|+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~--~~-~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~ 224 (480)
T 2vch_A 151 LPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDRK--DD-AYKWLLHNTKRYKEAEGILVNTFFELEPNAIK 224 (480)
T ss_dssp HHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCTT--SH-HHHHHHHHHHHGGGCSEEEESCCTTTSHHHHH
T ss_pred HHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcCC--ch-HHHHHHHHHHhcccCCEEEEcCHHHHhHHHHH
Confidence 3210 0000 22234677664 44555555443211 11 22333344445567888999999999998877
Q ss_pred HHHhhc--CCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHH
Q 010940 234 EYKRVK--GDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLG 311 (497)
Q Consensus 234 ~~~~~~--~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~a 311 (497)
.+.... .+++++|||+....+.. ..+..++++.+||+..+++++|||||||+...+.+++.+++++
T Consensus 225 ~l~~~~~~~~~v~~vGpl~~~~~~~------------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~a 292 (480)
T 2vch_A 225 ALQEPGLDKPPVYPVGPLVNIGKQE------------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALG 292 (480)
T ss_dssp HHHSCCTTCCCEEECCCCCCCSCSC------------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHH
T ss_pred HHHhcccCCCcEEEEeccccccccc------------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHH
Confidence 776421 26899999996433110 0023467899999998778899999999998889999999999
Q ss_pred HHhCCCCEEEEEeCCCCC-----------CCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHH
Q 010940 312 LEASSQPFIWVIRGGERS-----------QGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTL 380 (497)
Q Consensus 312 l~~~~~~~i~~~~~~~~~-----------~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~ 380 (497)
|+.++++|||+++..... .....+ +|++|.++....++++.+|+||.++|+|+++++|||||||||++
T Consensus 293 l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~ 371 (480)
T 2vch_A 293 LADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTL 371 (480)
T ss_dssp HHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHH
T ss_pred HHhcCCcEEEEECCccccccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHH
Confidence 999999999999865421 111112 78888888877778887799999999999999999999999999
Q ss_pred HHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHH
Q 010940 381 EGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRAR 460 (497)
Q Consensus 381 eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~ 460 (497)
||+++|||||++|+++||+.||+++++++|+|+.++..+ ++.+++++|+++|+++|++ +.+++||+||+
T Consensus 372 Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~----------~~~~~~~~l~~av~~vl~~-~~~~~~r~~a~ 440 (480)
T 2vch_A 372 ESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD----------DGLVRREEVARVVKGLMEG-EEGKGVRNKMK 440 (480)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT----------TSCCCHHHHHHHHHHHHTS-THHHHHHHHHH
T ss_pred HHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeeccc----------CCccCHHHHHHHHHHHhcC-cchHHHHHHHH
Confidence 999999999999999999999999866799999997641 1128999999999999983 35589999999
Q ss_pred HHHHHHHHHhccCCChHHHHHHHHHHHHhh
Q 010940 461 QLGEIANRAIGVGGSSHRNIEMLIEFVIQQ 490 (497)
Q Consensus 461 ~~~~~~~~a~~~gg~~~~~~~~~~~~~~~~ 490 (497)
++++++++|+++||++..++++||+.+...
T Consensus 441 ~l~~~~~~a~~~gGss~~~~~~~v~~~~~~ 470 (480)
T 2vch_A 441 ELKEAACRVLKDDGTSTKALSLVALKWKAH 470 (480)
T ss_dssp HHHHHHHHHTSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999988653
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=8.2e-61 Score=496.39 Aligned_cols=454 Identities=26% Similarity=0.441 Sum_probs=323.3
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhc-CCCeeEEEeeCCCccCC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVES-GLSIQLLQLEFPSVESG 79 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~-~~~i~f~~i~~~~~~~~ 79 (497)
|+..+ |+++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+........ ..+++|+.+|. +
T Consensus 1 ~~~~~-~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-----~ 74 (482)
T 2pq6_A 1 MGNFA-NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD-----G 74 (482)
T ss_dssp --------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC-----C
T ss_pred CCccc-CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC-----C
Confidence 56542 56789999999999999999999999999999999999997766554331100001 13799999872 4
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHH-HHhhHHHHHHHhhc-----CCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHH
Q 010940 80 LPQGCENMDKLPSRDLIKNFFHAA-SMLKQPFEQLFDKL-----HPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCF 153 (497)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~-----~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 153 (497)
++........... +..++... ..+...+++++++. ..+||+||+|.++.|+..+|+++|||++.++++++.
T Consensus 75 lp~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~ 151 (482)
T 2pq6_A 75 LTPMEGDGDVSQD---VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSAC 151 (482)
T ss_dssp CC---------CC---HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHH
T ss_pred CCCcccccCcchh---HHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHH
Confidence 4441000111111 22233333 44556677776642 248999999999999999999999999999999887
Q ss_pred HHHhhhhhhh-----ccCCC----------C-cccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCc
Q 010940 154 ACCCTHKLEI-----SKVSK----------F-ESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSAD 217 (497)
Q Consensus 154 ~~~~~~~~~~-----~~~~~----------~-~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (497)
....+.+++. ..+.. . ....+|+++. +...+++.++..... ...+..++.+..+...+++
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 227 (482)
T 2pq6_A 152 SLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNP-NDIMLEFFIEVADRVNKDT 227 (482)
T ss_dssp HHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCT-TCHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCc-ccHHHHHHHHHHHhhccCC
Confidence 6655443321 11100 0 0112345543 444555555433211 1123344445555667889
Q ss_pred EEEEcchHHhhHHHHHHHHhhcCCcEEEeccCcCC-CccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCC
Q 010940 218 GIVVNTFEELEAEYVKEYKRVKGDKVWCIGPVSAC-NKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGS 296 (497)
Q Consensus 218 ~~~~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS 296 (497)
.+++||+++||+++++.+++.+ +++++|||++.. ++.......+.. ....+..+.++.+||++.+++++|||||||
T Consensus 228 ~vl~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~wld~~~~~~vv~vs~GS 304 (482)
T 2pq6_A 228 TILLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSL--DSNLWKEDTECLDWLESKEPGSVVYVNFGS 304 (482)
T ss_dssp CEEESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC-----------CHHHHHHTTSCTTCEEEEECCS
T ss_pred EEEEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccc--cccccccchHHHHHHhcCCCCceEEEecCC
Confidence 9999999999999999888877 899999999642 111000000000 001112345689999998778899999999
Q ss_pred CcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCc
Q 010940 297 ICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGW 376 (497)
Q Consensus 297 ~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~ 376 (497)
+...+.+++.+++++|+.++.+|||+++.+...+.... +|+++.++. ++|+.+.+|+||.++|.|+++++||||||+
T Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~ 381 (482)
T 2pq6_A 305 TTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGW 381 (482)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGG--SCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCH
T ss_pred cccCCHHHHHHHHHHHHhcCCcEEEEEcCCcccccccc--CcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCc
Confidence 98888888999999999999999999986432111111 677776655 579999999999999999999999999999
Q ss_pred hhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHH
Q 010940 377 NSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRR 456 (497)
Q Consensus 377 gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~ 456 (497)
||++||+++|||+|++|++.||+.||+++++++|+|+.++ .+ +++++|.++|+++|+|++ +.+||
T Consensus 382 ~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~-------------~~~~~l~~~i~~ll~~~~-~~~~r 446 (482)
T 2pq6_A 382 NSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TN-------------VKREELAKLINEVIAGDK-GKKMK 446 (482)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SS-------------CCHHHHHHHHHHHHTSHH-HHHHH
T ss_pred chHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CC-------------CCHHHHHHHHHHHHcCCc-HHHHH
Confidence 9999999999999999999999999999965699999997 45 899999999999999722 34799
Q ss_pred HHHHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 010940 457 KRARQLGEIANRAIGVGGSSHRNIEMLIEFVI 488 (497)
Q Consensus 457 ~~a~~~~~~~~~a~~~gg~~~~~~~~~~~~~~ 488 (497)
+||+++++.+++|+++|||+.+++++||+++.
T Consensus 447 ~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 447 QKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999874
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=6.7e-60 Score=485.01 Aligned_cols=435 Identities=25% Similarity=0.423 Sum_probs=323.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCe--EEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIK--VTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
++++||+++|+|++||++|++.||+.|++|||+ ||+++++.+...+.+.... ....+++|+.++ +++++..
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~-----~glp~~~ 77 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDIS-----DGVPEGY 77 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----CCCCTTC
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCC-----CCCCCcc
Confidence 457899999999999999999999999999765 5778877544433322100 012478998886 2555543
Q ss_pred CCCCCCCChhHHHHHHHHH-HHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhhhhhhh
Q 010940 85 ENMDKLPSRDLIKNFFHAA-SMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCTHKLEI 163 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 163 (497)
+.. . .....+..+.... ..+...+++++++...+||+||+|.++.|+..+|+++|||++.+++++++......+...
T Consensus 78 ~~~-~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 155 (456)
T 2c1x_A 78 VFA-G-RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDE 155 (456)
T ss_dssp CCC-C-CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHH
T ss_pred ccc-C-ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHH
Confidence 221 1 1223333343333 334445555554423499999999999999999999999999999998776554332211
Q ss_pred ---c-c-----C-CCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHH
Q 010940 164 ---S-K-----V-SKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVK 233 (497)
Q Consensus 164 ---~-~-----~-~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~ 233 (497)
. . . .......+||++. .+.++++.++... .....+..+..+......+++++++||++++|+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 156 IREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFG-NLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCC-CcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 0 1 0 0111224678775 5566666544321 1112344555555555677899999999999999888
Q ss_pred HHHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHH
Q 010940 234 EYKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLE 313 (497)
Q Consensus 234 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 313 (497)
.+++.+ +++++|||+....+. ..+..+.++.+|++..+++++|||||||+...+.+++.+++++|+
T Consensus 232 ~~~~~~-~~~~~vGpl~~~~~~-------------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 297 (456)
T 2c1x_A 232 DLKSKL-KTYLNIGPFNLITPP-------------PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALE 297 (456)
T ss_dssp HHHHHS-SCEEECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHH
T ss_pred HHHhcC-CCEEEecCcccCccc-------------ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHH
Confidence 888776 799999999643321 111124568899998878889999999999888889999999999
Q ss_pred hCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeecc
Q 010940 314 ASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCP 393 (497)
Q Consensus 314 ~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP 393 (497)
..+.+|||+++...... +|++|.++. .+|+.+.+|+||.++|+|+++++||||||+||++||+++|||+|++|
T Consensus 298 ~~~~~~lw~~~~~~~~~------l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P 370 (456)
T 2c1x_A 298 ASRVPFIWSLRDKARVH------LPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRP 370 (456)
T ss_dssp HHTCCEEEECCGGGGGG------SCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred hcCCeEEEEECCcchhh------CCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecC
Confidence 99999999998654221 677776554 47899999999999999999999999999999999999999999999
Q ss_pred ccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccC
Q 010940 394 LFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVG 473 (497)
Q Consensus 394 ~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~g 473 (497)
++.||+.||+++++.+|+|+.++..+ +++++|.++|+++|+|++ +++||+||+++++.+++++++|
T Consensus 371 ~~~dQ~~Na~~l~~~~g~g~~l~~~~-------------~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~g 436 (456)
T 2c1x_A 371 FFGDQRLNGRMVEDVLEIGVRIEGGV-------------FTKSGLMSCFDQILSQEK-GKKLRENLRALRETADRAVGPK 436 (456)
T ss_dssp CSTTHHHHHHHHHHTSCCEEECGGGS-------------CCHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHTSTT
T ss_pred ChhhHHHHHHHHHHHhCeEEEecCCC-------------cCHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999966339999997655 899999999999999732 5589999999999999999999
Q ss_pred CChHHHHHHHHHHHHh
Q 010940 474 GSSHRNIEMLIEFVIQ 489 (497)
Q Consensus 474 g~~~~~~~~~~~~~~~ 489 (497)
|||.+++++||+++..
T Consensus 437 GsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 437 GSSTENFITLVDLVSK 452 (456)
T ss_dssp CHHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHHHHHh
Confidence 9999999999998854
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3.1e-59 Score=481.33 Aligned_cols=437 Identities=26% Similarity=0.400 Sum_probs=323.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcc-hhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTT-RFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+.. .+.+..........+++|+.+|.. .++. .
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~-~ 82 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP-Q 82 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-G
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-c
Confidence 46899999999999999999999999999 99999999987642 122221110112348999999743 1221 1
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhc-CCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhhhhhhh
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKL-HPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCTHKLEI 163 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 163 (497)
+... ..... +..........+++++++. ..+||+||+|.++.|+..+|+++|||++.++++++.....++++..
T Consensus 83 ~~~~---~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 157 (463)
T 2acv_A 83 ELLK---SPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN 157 (463)
T ss_dssp GGGG---SHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGG
T ss_pred cccC---CccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHh
Confidence 1111 11222 4444556666788888761 2389999999999999999999999999999998887665554432
Q ss_pred cc---C--CCCc---ccccCCC-CCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHH
Q 010940 164 SK---V--SKFE---SFVVPGL-PHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKE 234 (497)
Q Consensus 164 ~~---~--~~~~---~~~~pgl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~ 234 (497)
.. + +... ...+||+ +. +...+++..+.... . +.....+......+++++++|||+++|+...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~~---~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~ 230 (463)
T 2acv_A 158 RQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNKD---G-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDA 230 (463)
T ss_dssp SCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCTT---T-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHH
T ss_pred hcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCCc---h-HHHHHHHHHHhcccCCEEEECCHHHHhHHHHHH
Confidence 11 0 1111 3456777 44 44444443332211 1 222333444455778889999999999998877
Q ss_pred HHhhc--CCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCc-CCCHHhHHHHHHH
Q 010940 235 YKRVK--GDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSIC-GLATWQLLELGLG 311 (497)
Q Consensus 235 ~~~~~--~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~a 311 (497)
+.... ++++++|||+.......... ..+..+.++.+||+..+++++|||||||+. ..+.+++.+++++
T Consensus 231 l~~~~~p~~~v~~vGpl~~~~~~~~~~---------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~ 301 (463)
T 2acv_A 231 LYDHDEKIPPIYAVGPLLDLKGQPNPK---------LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 301 (463)
T ss_dssp HHHHCTTSCCEEECCCCCCSSCCCBTT---------BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHH
T ss_pred HHhccccCCcEEEeCCCcccccccccc---------cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHH
Confidence 76655 68999999996432100000 001235688999999888889999999999 7888889999999
Q ss_pred HHhCCCCEEEEEeCCCCCCCccccccchhHHHHhC-CCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCcee
Q 010940 312 LEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTT-GRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLV 390 (497)
Q Consensus 312 l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v 390 (497)
|+..+.+|||+++.+.. + +|++|.++.. .+|+++.+|+||.++|.|+++++||||||+||++||+++|||+|
T Consensus 302 l~~~~~~~l~~~~~~~~------~-l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i 374 (463)
T 2acv_A 302 LKHSGVRFLWSNSAEKK------V-FPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPIL 374 (463)
T ss_dssp HHHHTCEEEEECCCCGG------G-SCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEE
T ss_pred HHhCCCcEEEEECCCcc------c-CChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCee
Confidence 99999999999986411 1 6677765541 36888889999999999999999999999999999999999999
Q ss_pred eccccccccchHHHHHHHHcceEEe-ccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 010940 391 TCPLFAEQFYNEKLAVQVLGIGVSV-GIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 469 (497)
Q Consensus 391 ~iP~~~DQ~~na~~~~~~~G~G~~l-~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a 469 (497)
++|++.||+.||+++++++|+|+.+ +..+ .. +..+++++|.++|+++|++ +++||+||+++++.+++|
T Consensus 375 ~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~---~~~~~~~~l~~ai~~ll~~---~~~~r~~a~~l~~~~~~a 443 (463)
T 2acv_A 375 TWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KG---SDVVAAEEIEKGLKDLMDK---DSIVHKKVQEMKEMSRNA 443 (463)
T ss_dssp ECCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TT---CCCCCHHHHHHHHHHHTCT---TCTHHHHHHHHHHHHHHH
T ss_pred eccchhhhHHHHHHHHHHcCeEEEEecccC-----CC---CccccHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHH
Confidence 9999999999999965679999999 3110 00 0028999999999999973 278999999999999999
Q ss_pred hccCCChHHHHHHHHHHHH
Q 010940 470 IGVGGSSHRNIEMLIEFVI 488 (497)
Q Consensus 470 ~~~gg~~~~~~~~~~~~~~ 488 (497)
+++||||.+++++||+++.
T Consensus 444 ~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 444 VVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp TSTTSHHHHHHHHHHHHHH
T ss_pred HhcCCcHHHHHHHHHHHhc
Confidence 9999999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.8e-44 Score=367.39 Aligned_cols=398 Identities=16% Similarity=0.189 Sum_probs=269.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCEN 86 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~ 86 (497)
|+++||+|+++++.||++|++.||++|+++||+|+|++++.+.+.++.. |++|..++.. ++.....
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~~~~~~ 75 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSI-----LPKESNP 75 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCC-----SCCTTCT
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCcc-----ccccccc
Confidence 4568999999999999999999999999999999999999887766655 7888877632 2221111
Q ss_pred CCC-CCC-hhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhhhhhhhc
Q 010940 87 MDK-LPS-RDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCTHKLEIS 164 (497)
Q Consensus 87 ~~~-~~~-~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (497)
... ... ...+..+..........+.+++++. +||+||+|.+..++..+|+++|||++.+++.+.............
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 153 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV 153 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc
Confidence 000 111 1222233333455566788888877 999999999888899999999999999987654211100000000
Q ss_pred cCCCCccccc-CCCCCcccccccccCcccCCCCCcchhHHHHHHHHHh----------hhccCcEEEEcchHHhhHHHHH
Q 010940 165 KVSKFESFVV-PGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRA----------AEQSADGIVVNTFEELEAEYVK 233 (497)
Q Consensus 165 ~~~~~~~~~~-pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~s~~~le~~~~~ 233 (497)
. .+...... +..+... .....+.... .....+.....+... .....+.+++++.+.++++
T Consensus 154 ~-~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~--- 224 (424)
T 2iya_A 154 Q-DPTADRGEEAAAPAGT----GDAEEGAEAE-DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK--- 224 (424)
T ss_dssp S-CCCC-------------------------H-HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT---
T ss_pred c-cccccccccccccccc----ccchhhhccc-hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC---
Confidence 0 00000000 0000000 0000000000 000001111111111 1114567888888887754
Q ss_pred HHHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHH
Q 010940 234 EYKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLE 313 (497)
Q Consensus 234 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 313 (497)
...+++++++|||+.... ....+|++..+++++|||++||......+.+..++++++
T Consensus 225 --~~~~~~~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~ 281 (424)
T 2iya_A 225 --GDTVGDNYTFVGPTYGDR---------------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVD 281 (424)
T ss_dssp --GGGCCTTEEECCCCCCCC---------------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHT
T ss_pred --ccCCCCCEEEeCCCCCCc---------------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHh
Confidence 245678999999984211 112357765555679999999998666788889999998
Q ss_pred hCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeecc
Q 010940 314 ASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCP 393 (497)
Q Consensus 314 ~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP 393 (497)
..+.+++|+++.+.....++ ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|
T Consensus 282 ~~~~~~~~~~g~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p 348 (424)
T 2iya_A 282 GLDWHVVLSVGRFVDPADLG-----------EVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVP 348 (424)
T ss_dssp TCSSEEEEECCTTSCGGGGC-----------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred cCCcEEEEEECCcCChHHhc-----------cCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEec
Confidence 88889999887654221111 12479999999999999999997 999999999999999999999999
Q ss_pred ccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccC
Q 010940 394 LFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVG 473 (497)
Q Consensus 394 ~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~g 473 (497)
...||+.||+++ ++.|+|+.++..+ +++++|.++|+++++| ++++++++++++.+++. +
T Consensus 349 ~~~dQ~~na~~l-~~~g~g~~~~~~~-------------~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~---~ 407 (424)
T 2iya_A 349 QIAEQTMNAERI-VELGLGRHIPRDQ-------------VTAEKLREAVLAVASD----PGVAERLAAVRQEIREA---G 407 (424)
T ss_dssp CSHHHHHHHHHH-HHTTSEEECCGGG-------------CCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHTS---C
T ss_pred CccchHHHHHHH-HHCCCEEEcCcCC-------------CCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhc---C
Confidence 999999999999 5599999998766 8999999999999998 89999999999998743 4
Q ss_pred CChHHHHHHHHHHHH
Q 010940 474 GSSHRNIEMLIEFVI 488 (497)
Q Consensus 474 g~~~~~~~~~~~~~~ 488 (497)
|.. .+.+.|+.+.
T Consensus 408 ~~~--~~~~~i~~~~ 420 (424)
T 2iya_A 408 GAR--AAADILEGIL 420 (424)
T ss_dssp HHH--HHHHHHHHHH
T ss_pred cHH--HHHHHHHHHH
Confidence 433 5555666554
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.5e-43 Score=356.23 Aligned_cols=367 Identities=16% Similarity=0.183 Sum_probs=235.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccC--CCCCCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVES--GLPQGCE 85 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~--~~~~~~~ 85 (497)
+.|||+|+++|+.||++|+++||++|++|||+|||++++.+....+ . ++.+..+....... ..+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~---------g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-A---------GLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-T---------TCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-c---------CCeeEecCCchhHhhhccccccc
Confidence 5689999999999999999999999999999999999987655322 2 56666654221100 0000000
Q ss_pred CCC---C-CCChhHHH-HHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhhhh
Q 010940 86 NMD---K-LPSRDLIK-NFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCTHK 160 (497)
Q Consensus 86 ~~~---~-~~~~~~~~-~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 160 (497)
... . ......+. .+..........+.++++++ +||+||+|.+..++..+|+.+|||++.+...+.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~---- 164 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEP---- 164 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCH----
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeeccccccccc----
Confidence 000 0 00111111 22222344455677788888 9999999999899999999999999987654321110
Q ss_pred hhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHHH--hh
Q 010940 161 LEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEYK--RV 238 (497)
Q Consensus 161 ~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~--~~ 238 (497)
++.. ... ..+.....+................+. ...... ..
T Consensus 165 ---------------~~~~---~~~--------------~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 208 (400)
T 4amg_A 165 ---------------GLGA---LIR--------------RAMSKDYERHGVTGEPTGSVRLTTTPP----SVEALLPEDR 208 (400)
T ss_dssp ---------------HHHH---HHH--------------HHTHHHHHHTTCCCCCSCEEEEECCCH----HHHHTSCGGG
T ss_pred ---------------chhh---HHH--------------HHHHHHHHHhCCCcccccchhhcccCc----hhhccCcccc
Confidence 0000 000 000111111110111111111111110 000000 00
Q ss_pred cCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCC--HHhHHHHHHHHHhCC
Q 010940 239 KGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLA--TWQLLELGLGLEASS 316 (497)
Q Consensus 239 ~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~--~~~~~~~~~al~~~~ 316 (497)
..+....+.+.. ......+.+|++..+++++|||||||+...+ .+.+..++++++..+
T Consensus 209 ~~~~~~~~~~~~--------------------~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 209 RSPGAWPMRYVP--------------------YNGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp CCTTCEECCCCC--------------------CCCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred cCCcccCccccc--------------------ccccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 112222222221 1123445568888888889999999987643 367788999999999
Q ss_pred CCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeeccccc
Q 010940 317 QPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFA 396 (497)
Q Consensus 317 ~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~ 396 (497)
..++|..+...... .. ..++|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.
T Consensus 269 ~~~v~~~~~~~~~~-~~-----------~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 269 AEFVLTLGGGDLAL-LG-----------ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp SEEEEECCTTCCCC-CC-----------CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC--
T ss_pred ceEEEEecCccccc-cc-----------cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcc
Confidence 99999987654332 11 13489999999999999999887 999999999999999999999999999
Q ss_pred cccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCCh
Q 010940 397 EQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGSS 476 (497)
Q Consensus 397 DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~~ 476 (497)
||+.||+++ +++|+|+.++..+ .++ ++|+++|+| ++||++|+++++++++. .+..
T Consensus 335 dQ~~na~~v-~~~G~g~~l~~~~-------------~~~----~al~~lL~d----~~~r~~a~~l~~~~~~~---~~~~ 389 (400)
T 4amg_A 335 YQDTNRDVL-TGLGIGFDAEAGS-------------LGA----EQCRRLLDD----AGLREAALRVRQEMSEM---PPPA 389 (400)
T ss_dssp -CHHHHHHH-HHHTSEEECCTTT-------------CSH----HHHHHHHHC----HHHHHHHHHHHHHHHTS---CCHH
T ss_pred cHHHHHHHH-HHCCCEEEcCCCC-------------chH----HHHHHHHcC----HHHHHHHHHHHHHHHcC---CCHH
Confidence 999999999 5599999998765 554 467789998 99999999999999854 4433
Q ss_pred HHHHHHHHHHH
Q 010940 477 HRNIEMLIEFV 487 (497)
Q Consensus 477 ~~~~~~~~~~~ 487 (497)
++.+.|+.|
T Consensus 390 --~~a~~le~l 398 (400)
T 4amg_A 390 --ETAAXLVAL 398 (400)
T ss_dssp --HHHHHHHHH
T ss_pred --HHHHHHHHh
Confidence 555666654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.7e-41 Score=343.23 Aligned_cols=383 Identities=14% Similarity=0.119 Sum_probs=248.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENMDK 89 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~~~ 89 (497)
|||+|++.++.||++|+++||++|++|||+|+|++++...+.++.. |++|..++....+ .+ +....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~-~~----~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARA-PI----QRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHH-Hh----hcccc
Confidence 5899999999999999999999999999999999999765555444 7899888743111 11 11111
Q ss_pred CCChhHHHHHHHHHHHhhHHHHHHHh-hcCCCCcEEEeCC-CCcc--hHHHHHHcCCCeEEEccchHHHHHhhhhhhhcc
Q 010940 90 LPSRDLIKNFFHAASMLKQPFEQLFD-KLHPRPSCIISGK-NLPW--TVNSAIKFKIPTILFDGMGCFACCCTHKLEISK 165 (497)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~ll~-~~~~~pDlvI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 165 (497)
.....+..++. ......++++.+ .. +||+||+|. +..+ +..+|+++|||++.+++++.....
T Consensus 67 -~~~~~~~~~~~--~~~~~~~~~l~~~~~--~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~--------- 132 (415)
T 1iir_A 67 -LTAEDVRRFTT--EAIATQFDEIPAAAE--GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS--------- 132 (415)
T ss_dssp -CCHHHHHHHHH--HHHHHHHHHHHHHTT--TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC---------
T ss_pred -cchHHHHHHHH--HHHHHHHHHHHHHhc--CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC---------
Confidence 11111111111 112233445543 34 999999998 5567 888999999999998877543210
Q ss_pred CCCCcccccCCCCCcccccccccCccc-CC-CCCc-chhHHHHHHHHHhhh------------ccCcEEEEcchHHhhH-
Q 010940 166 VSKFESFVVPGLPHRIELIKAQLPEAL-NP-AGSH-VQDLTQVRHNIRAAE------------QSADGIVVNTFEELEA- 229 (497)
Q Consensus 166 ~~~~~~~~~pgl~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~------------~~~~~~~~~s~~~le~- 229 (497)
...+.+..+ +.++.+...+.+ .. .... ...+........... ... .+++++.+.+++
T Consensus 133 ----~~~p~~~~~--~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~ 205 (415)
T 1iir_A 133 ----PYYPPPPLG--EPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL 205 (415)
T ss_dssp ----SSSCCCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC
T ss_pred ----cccCCccCC--ccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC
Confidence 000000000 000000000000 00 0000 000000111111110 011 356666666653
Q ss_pred HHHHHHHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHH
Q 010940 230 EYVKEYKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELG 309 (497)
Q Consensus 230 ~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~ 309 (497)
+ +..+ ++++|||+....+ +..+.++.+|++..+ ++|||++||+. ...+.+..++
T Consensus 206 ~-----~~~~--~~~~vG~~~~~~~----------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 206 Q-----PTDL--DAVQTGAWILPDE----------------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp C-----CCSS--CCEECCCCCCCCC----------------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHH
T ss_pred C-----cccC--CeEeeCCCccCcc----------------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHH
Confidence 2 1112 7999999954321 234677889997653 59999999997 5677788899
Q ss_pred HHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCce
Q 010940 310 LGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPL 389 (497)
Q Consensus 310 ~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~ 389 (497)
++++..+.+++|+++.+.... .. + ++|+.+.+|+||.++|+.+++ ||||||+||++||+++|||+
T Consensus 260 ~al~~~~~~~v~~~g~~~~~~--~~--~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~ 324 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWADLVL--PD--D---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQ 324 (415)
T ss_dssp HHHHHTTCCEEECTTCTTCCC--SS--C---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCE
T ss_pred HHHHHCCCeEEEEeCCCcccc--cC--C---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCE
Confidence 999999999999887653210 10 2 368999999999999977776 99999999999999999999
Q ss_pred eeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 010940 390 VTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 469 (497)
Q Consensus 390 v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a 469 (497)
|++|...||..||+++ ++.|+|+.++..+ +++++|.++|+++ +| ++++++++++++.++.
T Consensus 325 i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~-------------~~~~~l~~~i~~l-~~----~~~~~~~~~~~~~~~~- 384 (415)
T 1iir_A 325 ILLPQMADQPYYAGRV-AELGVGVAHDGPI-------------PTFDSLSAALATA-LT----PETHARATAVAGTIRT- 384 (415)
T ss_dssp EECCCSTTHHHHHHHH-HHHTSEEECSSSS-------------CCHHHHHHHHHHH-TS----HHHHHHHHHHHHHSCS-
T ss_pred EECCCCCccHHHHHHH-HHCCCcccCCcCC-------------CCHHHHHHHHHHH-cC----HHHHHHHHHHHHHHhh-
Confidence 9999999999999999 6699999998765 8999999999999 88 8999999999988752
Q ss_pred hccCCChHHHHHHHHHHHHhhhc
Q 010940 470 IGVGGSSHRNIEMLIEFVIQQTR 492 (497)
Q Consensus 470 ~~~gg~~~~~~~~~~~~~~~~~~ 492 (497)
..+...+.+.|+.+.+.+.
T Consensus 385 ----~~~~~~~~~~i~~~~~~~~ 403 (415)
T 1iir_A 385 ----DGAAVAARLLLDAVSREKP 403 (415)
T ss_dssp ----CHHHHHHHHHHHHHHTC--
T ss_pred ----cChHHHHHHHHHHHHhccc
Confidence 2233466677777765543
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=3.3e-39 Score=328.78 Aligned_cols=364 Identities=13% Similarity=0.143 Sum_probs=252.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCC--
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCE-- 85 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~-- 85 (497)
.++||+|+++++.||++|++.||++|+++||+|+|++++.+.+.++.. |+.|..++.. ++....
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~-----~~~~~~~~ 84 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSE-----IIDADAAE 84 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCS-----TTTCCHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEecccc-----ccccccch
Confidence 468999999999999999999999999999999999988877776655 7899888632 111000
Q ss_pred CCCCCCChhHHHH-HHHHHHHhhHHHHHHHhhcCCCCcEEEeC-CCCcchHHHHHHcCCCeEEEccchHHHHHhhhhhhh
Q 010940 86 NMDKLPSRDLIKN-FFHAASMLKQPFEQLFDKLHPRPSCIISG-KNLPWTVNSAIKFKIPTILFDGMGCFACCCTHKLEI 163 (497)
Q Consensus 86 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~~pDlvI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 163 (497)
..........+.. +..........+.++++++ +||+||+| ....++..+|+++|||++.+.+.......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~------- 155 (415)
T 3rsc_A 85 VFGSDDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH------- 155 (415)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-------
T ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-------
Confidence 0000011122222 3344445556788888888 99999999 66678888999999999998754321100
Q ss_pred ccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhh----------hc-cCcEEEEcchHHhhHHHH
Q 010940 164 SKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAA----------EQ-SADGIVVNTFEELEAEYV 232 (497)
Q Consensus 164 ~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~s~~~le~~~~ 232 (497)
... .+.+.. ..+...+.. ...+.....+.... .. ..+..++..-+.++
T Consensus 156 -----~~~--~~~~~~---~~~~~~p~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~---- 214 (415)
T 3rsc_A 156 -----YSF--SQDMVT---LAGTIDPLD-------LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ---- 214 (415)
T ss_dssp -----CCH--HHHHHH---HHTCCCGGG-------CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS----
T ss_pred -----ccc--cccccc---ccccCChhh-------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC----
Confidence 000 000000 000000000 00011111111111 01 11444444333333
Q ss_pred HHHHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHH
Q 010940 233 KEYKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGL 312 (497)
Q Consensus 233 ~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al 312 (497)
.....++.++.++||+.... .+..+|....+++++|||++||......+.+..+++++
T Consensus 215 -~~~~~~~~~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al 272 (415)
T 3rsc_A 215 -IAGDTFDDRFVFVGPCFDDR---------------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAF 272 (415)
T ss_dssp -TTGGGCCTTEEECCCCCCCC---------------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHH
T ss_pred -CCcccCCCceEEeCCCCCCc---------------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHH
Confidence 22455677899999984221 12334554445567999999999877778888999999
Q ss_pred HhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeec
Q 010940 313 EASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTC 392 (497)
Q Consensus 313 ~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~i 392 (497)
+..+.+++|.++.+.....++. .++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++
T Consensus 273 ~~~~~~~v~~~g~~~~~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 273 DGQPWHVVMTLGGQVDPAALGD-----------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp TTSSCEEEEECTTTSCGGGGCC-----------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEEC
T ss_pred hcCCcEEEEEeCCCCChHHhcC-----------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEe
Confidence 9888899998876533221111 2479999999999999999888 99999999999999999999999
Q ss_pred cccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH
Q 010940 393 PLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANR 468 (497)
Q Consensus 393 P~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~ 468 (497)
|...||+.||+++ ++.|+|+.+...+ +++++|.++|+++++| ++++++++++++.+.+
T Consensus 340 p~~~~q~~~a~~l-~~~g~g~~~~~~~-------------~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 340 PQSFDVQPMARRV-DQLGLGAVLPGEK-------------ADGDTLLAAVGAVAAD----PALLARVEAMRGHVRR 397 (415)
T ss_dssp CCSGGGHHHHHHH-HHHTCEEECCGGG-------------CCHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHH-HHcCCEEEcccCC-------------CCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHh
Confidence 9999999999999 5599999998876 8999999999999998 8999999999998874
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.4e-40 Score=335.44 Aligned_cols=382 Identities=13% Similarity=0.075 Sum_probs=249.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENMDK 89 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~~~ 89 (497)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++.. |++|..++....+ .+.. . ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--ccc
Confidence 5899999999999999999999999999999999998766666555 7899888743111 1111 0 001
Q ss_pred CCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCC-CCcc--hHHHHHHcCCCeEEEccchHHHHHhhhhhhhccC
Q 010940 90 LPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGK-NLPW--TVNSAIKFKIPTILFDGMGCFACCCTHKLEISKV 166 (497)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 166 (497)
.....+..++.. .....++.+.+ ...+||+||+|. +.++ +..+|+.+|||++.+++++....
T Consensus 68 -~~~~~~~~~~~~--~~~~~~~~l~~-~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~----------- 132 (416)
T 1rrv_A 68 -PPPEEEQRLAAM--TVEMQFDAVPG-AAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA----------- 132 (416)
T ss_dssp -CCHHHHHHHHHH--HHHHHHHHHHH-HTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------
T ss_pred -chhHHHHHHHHH--HHHHHHHHHHH-HhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-----------
Confidence 111111111111 11222333321 123999999997 3456 78899999999999887653221
Q ss_pred CCCcccccCCCCCcccccccccCcccCCCCCcchh----HHHHHHHHHhh------------hccCcEEEEcchHHhhHH
Q 010940 167 SKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQD----LTQVRHNIRAA------------EQSADGIVVNTFEELEAE 230 (497)
Q Consensus 167 ~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------------~~~~~~~~~~s~~~le~~ 230 (497)
....+ |.++ ++....+..+.+.. ...... +.....+.... .... .+++++.+.++++
T Consensus 133 --~~~~p-~~~~--~~~~~~r~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~ 205 (416)
T 1rrv_A 133 --SPHLP-PAYD--EPTTPGVTDIRVLW-EERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL 205 (416)
T ss_dssp --CSSSC-CCBC--SCCCTTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC
T ss_pred --CcccC-CCCC--CCCCchHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC
Confidence 00000 1110 00000000000000 000000 00001111111 0112 4667777766542
Q ss_pred HHHHHHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcC-CCHHhHHHHH
Q 010940 231 YVKEYKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICG-LATWQLLELG 309 (497)
Q Consensus 231 ~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~ 309 (497)
+.. .++++|||+..... +..+.++.+|++..+ ++|||++||+.. ...+.+..++
T Consensus 206 -----~~~--~~~~~vG~~~~~~~----------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~ 260 (416)
T 1rrv_A 206 -----QPD--VDAVQTGAWLLSDE----------------RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAV 260 (416)
T ss_dssp -----CSS--CCCEECCCCCCCCC----------------CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHH
T ss_pred -----CCC--CCeeeECCCccCcc----------------CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHH
Confidence 111 27899999954321 224677889997653 589999999875 3456678899
Q ss_pred HHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCce
Q 010940 310 LGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPL 389 (497)
Q Consensus 310 ~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~ 389 (497)
++++..+.+++|+++.+... .. ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+
T Consensus 261 ~al~~~~~~~v~~~g~~~~~--~~-----------~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~ 325 (416)
T 1rrv_A 261 EAIRAQGRRVILSRGWTELV--LP-----------DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQ 325 (416)
T ss_dssp HHHHHTTCCEEEECTTTTCC--CS-----------CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCE
T ss_pred HHHHHCCCeEEEEeCCcccc--cc-----------CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCE
Confidence 99999999999998765321 01 12478999999999999977776 99999999999999999999
Q ss_pred eeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 010940 390 VTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 469 (497)
Q Consensus 390 v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a 469 (497)
|++|...||+.||+++ ++.|+|+.++..+ +++++|.++|+++ +| ++|+++++++++.+++
T Consensus 326 i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~-------------~~~~~l~~~i~~l-~~----~~~~~~~~~~~~~~~~- 385 (416)
T 1rrv_A 326 LVIPRNTDQPYFAGRV-AALGIGVAHDGPT-------------PTFESLSAALTTV-LA----PETRARAEAVAGMVLT- 385 (416)
T ss_dssp EECCCSBTHHHHHHHH-HHHTSEEECSSSC-------------CCHHHHHHHHHHH-TS----HHHHHHHHHHTTTCCC-
T ss_pred EEccCCCCcHHHHHHH-HHCCCccCCCCCC-------------CCHHHHHHHHHHh-hC----HHHHHHHHHHHHHHhh-
Confidence 9999999999999999 5599999998765 8999999999999 88 8999999999888763
Q ss_pred hccCCChHHHHHHHH-HHHHhhh
Q 010940 470 IGVGGSSHRNIEMLI-EFVIQQT 491 (497)
Q Consensus 470 ~~~gg~~~~~~~~~~-~~~~~~~ 491 (497)
.++. .+.+.| +.+.+.+
T Consensus 386 ---~~~~--~~~~~i~e~~~~~~ 403 (416)
T 1rrv_A 386 ---DGAA--AAADLVLAAVGREK 403 (416)
T ss_dssp ---CHHH--HHHHHHHHHHHC--
T ss_pred ---cCcH--HHHHHHHHHHhccC
Confidence 2223 444444 7665543
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.1e-38 Score=321.17 Aligned_cols=382 Identities=16% Similarity=0.194 Sum_probs=256.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENM 87 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~ 87 (497)
.++||+|+++++.||++|++.||++|+++||+|++++++.+.+.++.. |+.|..++...... ......
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~---~~~~~~ 70 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTF---HVPEVV 70 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTS---SSSSSS
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccc---cccccc
Confidence 345999999999999999999999999999999999988766666554 78888886431110 000001
Q ss_pred CCCCChhHHHH-HHHHHHHhhHHHHHHHhhcCCCCcEEEeC-CCCcchHHHHHHcCCCeEEEccchHHHHHhhhhhhhcc
Q 010940 88 DKLPSRDLIKN-FFHAASMLKQPFEQLFDKLHPRPSCIISG-KNLPWTVNSAIKFKIPTILFDGMGCFACCCTHKLEISK 165 (497)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~~pDlvI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 165 (497)
........+.. +..........+.++++++ +||+||+| ....++..+|+++|||++.+++.........
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~------- 141 (402)
T 3ia7_A 71 KQEDAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYS------- 141 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBC-------
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccc-------
Confidence 11111222222 3333444556678888888 99999999 6667888899999999999865432110000
Q ss_pred CCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhh----------hccC-cEEEEcchHHhhHHHHHH
Q 010940 166 VSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAA----------EQSA-DGIVVNTFEELEAEYVKE 234 (497)
Q Consensus 166 ~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~s~~~le~~~~~~ 234 (497)
. .+.+.. ..+...+.. ...+.....+.... .... +..+...-+.++.
T Consensus 142 -----~--~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~----- 199 (402)
T 3ia7_A 142 -----L--FKELWK---SNGQRHPAD-------VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQP----- 199 (402)
T ss_dssp -----H--HHHHHH---HHTCCCGGG-------SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGST-----
T ss_pred -----c--cccccc---cccccChhh-------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCC-----
Confidence 0 000000 000000000 00011111111111 0111 3344443333332
Q ss_pred HHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHHh
Q 010940 235 YKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLEA 314 (497)
Q Consensus 235 ~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~ 314 (497)
....++.++.++||+.... .....|+...+++++|||++||......+.+..++++++.
T Consensus 200 ~~~~~~~~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~ 258 (402)
T 3ia7_A 200 FAETFDERFAFVGPTLTGR---------------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFAD 258 (402)
T ss_dssp TGGGCCTTEEECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTT
T ss_pred ccccCCCCeEEeCCCCCCc---------------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhc
Confidence 2345678899999984221 1223355444556799999999988777888999999998
Q ss_pred CCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeeccc
Q 010940 315 SSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPL 394 (497)
Q Consensus 315 ~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~ 394 (497)
.+..++|.++.+.....++. .++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|.
T Consensus 259 ~~~~~~~~~g~~~~~~~~~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 259 TPWHVVMAIGGFLDPAVLGP-----------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp SSCEEEEECCTTSCGGGGCS-----------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGG
T ss_pred CCcEEEEEeCCcCChhhhCC-----------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCC
Confidence 88899998886533221111 3479999999999999999887 9999999999999999999999999
Q ss_pred -cccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccC
Q 010940 395 -FAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVG 473 (497)
Q Consensus 395 -~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~g 473 (497)
..||+.||+++ ++.|+|+.+...+ +++++|.++|.++++| ++++++++++++.+.+ +
T Consensus 326 ~~~~q~~~a~~~-~~~g~g~~~~~~~-------------~~~~~l~~~~~~ll~~----~~~~~~~~~~~~~~~~----~ 383 (402)
T 3ia7_A 326 FATEAAPSAERV-IELGLGSVLRPDQ-------------LEPASIREAVERLAAD----SAVRERVRRMQRDILS----S 383 (402)
T ss_dssp GCGGGHHHHHHH-HHTTSEEECCGGG-------------CSHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHT----S
T ss_pred CcccHHHHHHHH-HHcCCEEEccCCC-------------CCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHhh----C
Confidence 99999999999 5599999998876 8999999999999998 8999999999988763 3
Q ss_pred CChHHHHHHHHHHHHh
Q 010940 474 GSSHRNIEMLIEFVIQ 489 (497)
Q Consensus 474 g~~~~~~~~~~~~~~~ 489 (497)
++. ..+.+.|+++..
T Consensus 384 ~~~-~~~~~~i~~~~~ 398 (402)
T 3ia7_A 384 GGP-ARAADEVEAYLG 398 (402)
T ss_dssp CHH-HHHHHHHHHHHH
T ss_pred ChH-HHHHHHHHHHHh
Confidence 333 345555555443
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=8.6e-40 Score=331.83 Aligned_cols=368 Identities=14% Similarity=0.066 Sum_probs=248.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENMDK 89 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~~~ 89 (497)
|||+|++.++.||++|+++||++|++|||+|++++++...+.++.. |+.|..++...... .. ...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~---~~---~~~ 65 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAG---AR---EPG 65 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGG---GS---CTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHH---hc---ccc
Confidence 5899999999999999999999999999999999998877776656 88998887442211 00 000
Q ss_pred CCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcch---HHHHHHcCCCeEEEccchHHHHHhhhhhhhccC
Q 010940 90 LPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWT---VNSAIKFKIPTILFDGMGCFACCCTHKLEISKV 166 (497)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 166 (497)
.........+..........+.++++ +||+||+|.....+ ..+|+.+|||++.++.++.......+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~l~~~~~----~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~------- 134 (404)
T 3h4t_A 66 ELPPGAAEVVTEVVAEWFDKVPAAIE----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQS------- 134 (404)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHHT----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSC-------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhH-------
Confidence 00011111222333344444444442 79999998765444 67899999999998877542111000
Q ss_pred CCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhc-----------cCcEEEEcchHHhhHHHHHHH
Q 010940 167 SKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQ-----------SADGIVVNTFEELEAEYVKEY 235 (497)
Q Consensus 167 ~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~~~le~~~~~~~ 235 (497)
. ..++..... ....+....++.+..+. ..+..+++..+.+.+.
T Consensus 135 -----------~----~~~~~~~~~------~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~----- 188 (404)
T 3h4t_A 135 -----------Q----AERDMYNQG------ADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL----- 188 (404)
T ss_dssp -----------H----HHHHHHHHH------HHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-----
T ss_pred -----------H----HHHHHHHHH------HHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-----
Confidence 0 000000000 00001111111111100 0111222333323221
Q ss_pred HhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHHhC
Q 010940 236 KRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLEAS 315 (497)
Q Consensus 236 ~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~ 315 (497)
+.+++++.++|++..+. ...+++++.+|++.. +++|||++||+.. ..+.+..++++++..
T Consensus 189 -~~~~~~~~~~G~~~~~~----------------~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~ 248 (404)
T 3h4t_A 189 -RPTDLGTVQTGAWILPD----------------QRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQ 248 (404)
T ss_dssp -CTTCCSCCBCCCCCCCC----------------CCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHT
T ss_pred -CCCCCCeEEeCccccCC----------------CCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhC
Confidence 23456888899875432 233567888898754 3599999999987 667788899999999
Q ss_pred CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeecccc
Q 010940 316 SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLF 395 (497)
Q Consensus 316 ~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~ 395 (497)
+.++||+.+...... +. .++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|+.
T Consensus 249 ~~~vv~~~g~~~~~~------~~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~ 313 (404)
T 3h4t_A 249 GRRVVLSSGWAGLGR------ID-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQK 313 (404)
T ss_dssp TCCEEEECTTTTCCC------SS-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CCEEEEEeCCccccc------cc-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCc
Confidence 999999987654321 11 2489999999999999988887 99999999999999999999999999
Q ss_pred ccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCC
Q 010940 396 AEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGS 475 (497)
Q Consensus 396 ~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~ 475 (497)
.||+.||+++ ++.|+|+.++..+ +++++|.++|+++++ ++|+++++++++.+++ .
T Consensus 314 ~dQ~~na~~~-~~~G~g~~l~~~~-------------~~~~~l~~ai~~ll~-----~~~~~~~~~~~~~~~~------~ 368 (404)
T 3h4t_A 314 ADQPYYAGRV-ADLGVGVAHDGPT-------------PTVESLSAALATALT-----PGIRARAAAVAGTIRT------D 368 (404)
T ss_dssp TTHHHHHHHH-HHHTSEEECSSSS-------------CCHHHHHHHHHHHTS-----HHHHHHHHHHHTTCCC------C
T ss_pred ccHHHHHHHH-HHCCCEeccCcCC-------------CCHHHHHHHHHHHhC-----HHHHHHHHHHHHHHhh------h
Confidence 9999999999 5599999998766 899999999999996 6899999999888752 2
Q ss_pred hHHHHHHHHHHHHh
Q 010940 476 SHRNIEMLIEFVIQ 489 (497)
Q Consensus 476 ~~~~~~~~~~~~~~ 489 (497)
+...+.+.|+++..
T Consensus 369 ~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 369 GTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 33455566665544
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.9e-38 Score=322.76 Aligned_cols=384 Identities=13% Similarity=0.084 Sum_probs=240.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC--C
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC--E 85 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~--~ 85 (497)
.+|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++.. |++|..++......++.... .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhcc
Confidence 458999999999999999999999999999999999998766555544 88998886431000000000 0
Q ss_pred C------CCC----CC--ChhHHHHHHHHH----H-----H-hhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCC
Q 010940 86 N------MDK----LP--SRDLIKNFFHAA----S-----M-LKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIP 143 (497)
Q Consensus 86 ~------~~~----~~--~~~~~~~~~~~~----~-----~-~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP 143 (497)
. .+. .. ....+....... . . ....+.++++++ +||+||+|....++..+|+.+|||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgiP 167 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGTP 167 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTCC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCCC
Confidence 0 000 00 111111111111 1 1 344566667777 999999999778888899999999
Q ss_pred eEEEccchHHHHHhhhhhhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhcc--------
Q 010940 144 TILFDGMGCFACCCTHKLEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQS-------- 215 (497)
Q Consensus 144 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 215 (497)
++.+...+.........+. ......|.. .+ .. .+...+.+.......
T Consensus 168 ~v~~~~~~~~~~~~~~~~~------~~~~~~~~~------------~~---~~----~~~~~l~~~~~~~g~~~~~~~~~ 222 (441)
T 2yjn_A 168 HARLLWGPDITTRARQNFL------GLLPDQPEE------------HR---ED----PLAEWLTWTLEKYGGPAFDEEVV 222 (441)
T ss_dssp EEEECSSCCHHHHHHHHHH------HHGGGSCTT------------TC---CC----HHHHHHHHHHHHTTCCCCCGGGT
T ss_pred EEEEecCCCcchhhhhhhh------hhccccccc------------cc---cc----hHHHHHHHHHHHcCCCCCCcccc
Confidence 9998654432111000000 000000000 00 00 011222222221100
Q ss_pred -CcEEEEcchHHhhHHHHHHHHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEee
Q 010940 216 -ADGIVVNTFEELEAEYVKEYKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACL 294 (497)
Q Consensus 216 -~~~~~~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~ 294 (497)
.+.++....+.++.+ ..++ . ..+++. ....+.++.+|++..+++++|||++
T Consensus 223 ~~~~~l~~~~~~~~~~------~~~~-~-~~~~~~--------------------~~~~~~~~~~~l~~~~~~~~v~v~~ 274 (441)
T 2yjn_A 223 VGQWTIDPAPAAIRLD------TGLK-T-VGMRYV--------------------DYNGPSVVPEWLHDEPERRRVCLTL 274 (441)
T ss_dssp SCSSEEECSCGGGSCC------CCCC-E-EECCCC--------------------CCCSSCCCCGGGSSCCSSCEEEEEC
T ss_pred CCCeEEEecCccccCC------CCCC-C-Cceeee--------------------CCCCCcccchHhhcCCCCCEEEEEC
Confidence 112222221211110 0010 0 111111 0112345678887666667999999
Q ss_pred CCCcCC---CHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccc
Q 010940 295 GSICGL---ATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFL 371 (497)
Q Consensus 295 GS~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I 371 (497)
||+... ..+.+..++++++..+.++||+.+..... . +. ..++|+.+.+|+||.++|+.+++ ||
T Consensus 275 Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~V 340 (441)
T 2yjn_A 275 GISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE-G-----VA------NIPDNVRTVGFVPMHALLPTCAA--TV 340 (441)
T ss_dssp ----------CCSTTTTHHHHHTSSSEEEECCCTTTTS-S-----CS------SCCSSEEECCSCCHHHHGGGCSE--EE
T ss_pred CCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh-h-----hc------cCCCCEEEecCCCHHHHHhhCCE--EE
Confidence 998764 34566778899998899999988754321 1 11 02479999999999999988777 99
Q ss_pred cCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCch
Q 010940 372 THCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQ 451 (497)
Q Consensus 372 ~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 451 (497)
||||+||++||+++|+|+|++|...||+.||+++ ++.|+|+.++..+ +++++|.++|+++++|
T Consensus 341 ~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~-------------~~~~~l~~~i~~ll~~--- 403 (441)
T 2yjn_A 341 HHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVPE-------------LTPDQLRESVKRVLDD--- 403 (441)
T ss_dssp ECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTTT-------------CCHHHHHHHHHHHHHC---
T ss_pred ECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEccccc-------------CCHHHHHHHHHHHhcC---
Confidence 9999999999999999999999999999999999 5599999998766 8999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhhhc
Q 010940 452 GEKRRKRARQLGEIANRAIGVGGSSHRNIEMLIEFVIQQTR 492 (497)
Q Consensus 452 ~~~~~~~a~~~~~~~~~a~~~gg~~~~~~~~~~~~~~~~~~ 492 (497)
++++++++++++.+.+. .+ ...+.+.|+.+...++
T Consensus 404 -~~~~~~~~~~~~~~~~~---~~--~~~~~~~i~~~~~~~~ 438 (441)
T 2yjn_A 404 -PAHRAGAARMRDDMLAE---PS--PAEVVGICEELAAGRR 438 (441)
T ss_dssp -HHHHHHHHHHHHHHHTS---CC--HHHHHHHHHHHHHC--
T ss_pred -HHHHHHHHHHHHHHHcC---CC--HHHHHHHHHHHHHhcc
Confidence 99999999999988742 33 3466667777665444
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.2e-37 Score=316.81 Aligned_cols=374 Identities=15% Similarity=0.178 Sum_probs=244.9
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGL 80 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~ 80 (497)
|+.+ |+++||++++.++.||++|++.||++|+++||+|++++++...+.++.. |+++..++.. .
T Consensus 1 M~~~--m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~ 64 (430)
T 2iyf_A 1 MTTQ--TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHST-----L 64 (430)
T ss_dssp ---------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCC-----S
T ss_pred CCCc--cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCc-----C
Confidence 5554 4457999999999999999999999999999999999988765444433 7888877632 1
Q ss_pred CCCCCCCC-CCCC-hhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhh
Q 010940 81 PQGCENMD-KLPS-RDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCT 158 (497)
Q Consensus 81 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 158 (497)
+....... .... ...+..+..........+.+++++. +||+||+|...+++..+|+++|||++.+++.+.......
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 142 (430)
T 2iyf_A 65 PGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYE 142 (430)
T ss_dssp CCTTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHH
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccc
Confidence 11111000 0011 1222222233344556677888887 999999998767888899999999999886543110000
Q ss_pred hhhhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHH------HhhhccCcEEEEcchHHhhHHHH
Q 010940 159 HKLEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNI------RAAEQSADGIVVNTFEELEAEYV 232 (497)
Q Consensus 159 ~~~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~s~~~le~~~~ 232 (497)
.... .+. ......++. .. .+ ...+..+..+. .......+.+++++.+.++.+
T Consensus 143 ~~~~----~~~-~~~~~~~~~---~~-----~~-------~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-- 200 (430)
T 2iyf_A 143 EEVA----EPM-WREPRQTER---GR-----AY-------YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-- 200 (430)
T ss_dssp HHTH----HHH-HHHHHHSHH---HH-----HH-------HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT--
T ss_pred cccc----cch-hhhhccchH---HH-----HH-------HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC--
Confidence 0000 000 000000000 00 00 00011111110 001113566788887776643
Q ss_pred HHHHhhcCCc-EEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHH
Q 010940 233 KEYKRVKGDK-VWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLG 311 (497)
Q Consensus 233 ~~~~~~~~~~-v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~a 311 (497)
...++++ +++|||.....+ ...+|....+++++||+++||+.....+.+..++++
T Consensus 201 ---~~~~~~~~v~~vG~~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~ 256 (430)
T 2iyf_A 201 ---ADRVDEDVYTFVGACQGDRA---------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRA 256 (430)
T ss_dssp ---GGGSCTTTEEECCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHH
T ss_pred ---cccCCCccEEEeCCcCCCCC---------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHH
Confidence 1345677 999998632111 112455444456799999999985556778889999
Q ss_pred HHhC-CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCcee
Q 010940 312 LEAS-SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLV 390 (497)
Q Consensus 312 l~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v 390 (497)
++.. +.+++|.++.+.....++ ..++|+.+.+|+||.++|.++++ ||+|||+||++||+++|+|+|
T Consensus 257 l~~~~~~~~~~~~G~~~~~~~l~-----------~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i 323 (430)
T 2iyf_A 257 FGNLPGWHLVLQIGRKVTPAELG-----------ELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMI 323 (430)
T ss_dssp HTTCTTEEEEEECC---CGGGGC-----------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HhcCCCeEEEEEeCCCCChHHhc-----------cCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEE
Confidence 9886 778888887654321111 12478999999999999999987 999999999999999999999
Q ss_pred eccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 010940 391 TCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 469 (497)
Q Consensus 391 ~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a 469 (497)
++|...||..|++++ ++.|+|+.+...+ +++++|.++|.++++| ++++++++++++.+.+.
T Consensus 324 ~~p~~~~q~~~a~~~-~~~g~g~~~~~~~-------------~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 324 AVPQAVDQFGNADML-QGLGVARKLATEE-------------ATADLLRETALALVDD----PEVARRLRRIQAEMAQE 384 (430)
T ss_dssp ECCCSHHHHHHHHHH-HHTTSEEECCCC--------------CCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHH
T ss_pred ECCCccchHHHHHHH-HHcCCEEEcCCCC-------------CCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhc
Confidence 999999999999999 5599999988765 7899999999999998 88999998888887653
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.7e-36 Score=303.08 Aligned_cols=359 Identities=13% Similarity=0.114 Sum_probs=241.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCC-C
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENM-D 88 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~-~ 88 (497)
|||++++.++.||++|+++||++|+++||+|++++++...+.++.. |+.+..++............... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999988655444433 78888776321000000000000 0
Q ss_pred CC-CChhHH----HH-HHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhhhhhh
Q 010940 89 KL-PSRDLI----KN-FFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCTHKLE 162 (497)
Q Consensus 89 ~~-~~~~~~----~~-~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 162 (497)
.. ...... .. +..........+.+++++. +||+||+|....++..+|+.+|||++.++..+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~---------- 139 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV---------- 139 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC----------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCc----------
Confidence 00 111111 11 1112233445566777777 999999998777888899999999998764311
Q ss_pred hccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhh-----ccCcEEEEcchHHhhHHHHHHHHh
Q 010940 163 ISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAE-----QSADGIVVNTFEELEAEYVKEYKR 237 (497)
Q Consensus 163 ~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~le~~~~~~~~~ 237 (497)
.. .++. ..+.....+..... ...+.+++++.+.++.+ .
T Consensus 140 -------~~---~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~ 182 (384)
T 2p6p_A 140 -------DA---DGIH---------------------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPA------N 182 (384)
T ss_dssp -------CC---TTTH---------------------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------T
T ss_pred -------cc---chhh---------------------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------C
Confidence 00 0000 00111111111111 11456677766655432 0
Q ss_pred hcC-CcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCC-----CHHhHHHHHHH
Q 010940 238 VKG-DKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGL-----ATWQLLELGLG 311 (497)
Q Consensus 238 ~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~-----~~~~~~~~~~a 311 (497)
.++ .++.+++ . . .+.++.+|++..+++++|||++||+... ..+.+..++++
T Consensus 183 ~~~~~~~~~~~-~---~-------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~a 239 (384)
T 2p6p_A 183 AAPARMMRHVA-T---S-------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKD 239 (384)
T ss_dssp SCCCEECCCCC-C---C-------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHH
T ss_pred CCCCCceEecC-C---C-------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHH
Confidence 111 2233331 1 0 1234566877644557999999999865 45778889999
Q ss_pred HHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceee
Q 010940 312 LEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVT 391 (497)
Q Consensus 312 l~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~ 391 (497)
++..+.+++|+.+... .+.+.. .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|+
T Consensus 240 l~~~~~~~~~~~g~~~----------~~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~ 304 (384)
T 2p6p_A 240 LVRWDVELIVAAPDTV----------AEALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLL 304 (384)
T ss_dssp HHTTTCEEEEECCHHH----------HHHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEE
T ss_pred HhcCCcEEEEEeCCCC----------HHhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEE
Confidence 9998999999876421 112211 3579999 99999999988877 9999999999999999999999
Q ss_pred ccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhc
Q 010940 392 CPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIG 471 (497)
Q Consensus 392 iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~ 471 (497)
+|...||+.||+++ ++.|+|+.++..+ +++++|.++|+++++| ++++++++++++.+++.
T Consensus 305 ~p~~~dq~~~a~~~-~~~g~g~~~~~~~-------------~~~~~l~~~i~~ll~~----~~~~~~~~~~~~~~~~~-- 364 (384)
T 2p6p_A 305 IPKGSVLEAPARRV-ADYGAAIALLPGE-------------DSTEAIADSCQELQAK----DTYARRAQDLSREISGM-- 364 (384)
T ss_dssp CCCSHHHHHHHHHH-HHHTSEEECCTTC-------------CCHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHTS--
T ss_pred ccCcccchHHHHHH-HHCCCeEecCcCC-------------CCHHHHHHHHHHHHcC----HHHHHHHHHHHHHHHhC--
Confidence 99999999999999 5599999988665 8999999999999998 89999999999998853
Q ss_pred cCCChHHHHHHHHHHH
Q 010940 472 VGGSSHRNIEMLIEFV 487 (497)
Q Consensus 472 ~gg~~~~~~~~~~~~~ 487 (497)
.|. + .+.+.|+.+
T Consensus 365 -~~~-~-~~~~~i~~~ 377 (384)
T 2p6p_A 365 -PLP-A-TVVTALEQL 377 (384)
T ss_dssp -CCH-H-HHHHHHHHH
T ss_pred -CCH-H-HHHHHHHHH
Confidence 333 3 444444444
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2e-35 Score=299.14 Aligned_cols=349 Identities=15% Similarity=0.128 Sum_probs=219.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCC---CCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGL---PQGC 84 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~---~~~~ 84 (497)
.+|||+|++.++.||++|++.||++|+++||+|++++++...+.++.. |+.+..++.......+ ....
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREG 84 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTS
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccC
Confidence 468999999999999999999999999999999999987766666555 7888888632100000 0000
Q ss_pred CCCCCCCCh-hHH----HHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHHhhh
Q 010940 85 ENMDKLPSR-DLI----KNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACCCTH 159 (497)
Q Consensus 85 ~~~~~~~~~-~~~----~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 159 (497)
......... ... ..+......+...+.++++++ +||+||+|...+++..+|+.+|||++.+............
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~ 162 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKS 162 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHH
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhH
Confidence 000000001 111 111222244455677888888 9999999987788888999999999987654211100000
Q ss_pred hhhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhh-----ccCcEEEEcchHHhhHHHHHH
Q 010940 160 KLEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAE-----QSADGIVVNTFEELEAEYVKE 234 (497)
Q Consensus 160 ~~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~le~~~~~~ 234 (497)
.+.....+..... ...+..+....+.+...
T Consensus 163 -----------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 197 (398)
T 4fzr_A 163 -----------------------------------------AGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ---- 197 (398)
T ss_dssp -----------------------------------------HHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC------
T ss_pred -----------------------------------------HHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC----
Confidence 0001111111110 11122232222222211
Q ss_pred HHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCC--------CHHhHH
Q 010940 235 YKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGL--------ATWQLL 306 (497)
Q Consensus 235 ~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~--------~~~~~~ 306 (497)
.......+.++++. ....++.+|+...+++++|||++||+... ..+.+.
T Consensus 198 -~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~ 254 (398)
T 4fzr_A 198 -PKPGTTKMRYVPYN----------------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQ 254 (398)
T ss_dssp ---CCCEECCCCCCC----------------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHH
T ss_pred -CCCCCCCeeeeCCC----------------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHH
Confidence 00000111111110 01234555665555567999999999753 345678
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhC
Q 010940 307 ELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAG 386 (497)
Q Consensus 307 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~G 386 (497)
.++++++..+.+++|+.++.... . +. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|
T Consensus 255 ~~~~al~~~~~~~v~~~~~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G 320 (398)
T 4fzr_A 255 ALSQELPKLGFEVVVAVSDKLAQ-T-----LQ------PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEG 320 (398)
T ss_dssp HHHHHGGGGTCEEEECCCC--------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTT
T ss_pred HHHHHHHhCCCEEEEEeCCcchh-h-----hc------cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhC
Confidence 89999998899999988764321 1 11 13589999999999999999888 99999999999999999
Q ss_pred CceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHH
Q 010940 387 VPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIA 466 (497)
Q Consensus 387 vP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~ 466 (497)
+|+|++|...||+.|+.++ ++.|+|+.++..+ +++++|.++|.++|+| +++++++++.++.+
T Consensus 321 ~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~-------------~~~~~l~~ai~~ll~~----~~~~~~~~~~~~~~ 382 (398)
T 4fzr_A 321 VPQVSVPVIAEVWDSARLL-HAAGAGVEVPWEQ-------------AGVESVLAACARIRDD----SSYVGNARRLAAEM 382 (398)
T ss_dssp CCEEECCCSGGGHHHHHHH-HHTTSEEECC--------------------CHHHHHHHHHHC----THHHHHHHHHHHHH
T ss_pred CCEEecCCchhHHHHHHHH-HHcCCEEecCccc-------------CCHHHHHHHHHHHHhC----HHHHHHHHHHHHHH
Confidence 9999999999999999999 5599999998776 7899999999999998 88999999988887
Q ss_pred H
Q 010940 467 N 467 (497)
Q Consensus 467 ~ 467 (497)
.
T Consensus 383 ~ 383 (398)
T 4fzr_A 383 A 383 (398)
T ss_dssp T
T ss_pred H
Confidence 6
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=6.4e-34 Score=288.16 Aligned_cols=362 Identities=15% Similarity=0.165 Sum_probs=236.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCC-------
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGL------- 80 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~------- 80 (497)
..|||+|++.++.||++|++.||++|+++||+|+++++ ...+.++.. |+.+..++........
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccC
Confidence 46899999999999999999999999999999999998 665655544 8888888632100000
Q ss_pred -C---CCCCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHHH
Q 010940 81 -P---QGCENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFACC 156 (497)
Q Consensus 81 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 156 (497)
+ .................+..........+.++++++ +||+||+|...+++..+|+.+|||++.+........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~- 165 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR- 165 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT-
T ss_pred CccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc-
Confidence 0 000000000011122223333455667788888888 999999998878888899999999998664321000
Q ss_pred hhhhhhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHHH
Q 010940 157 CTHKLEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEYK 236 (497)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~ 236 (497)
.+.. .. . ..+..+..+........+..+...-+.+..+ .
T Consensus 166 -------------------~~~~-------~~---~-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 204 (398)
T 3oti_A 166 -------------------GMHR-------SI---A-------SFLTDLMDKHQVSLPEPVATIESFPPSLLLE-----A 204 (398)
T ss_dssp -------------------THHH-------HH---H-------TTCHHHHHHTTCCCCCCSEEECSSCGGGGTT-----S
T ss_pred -------------------chhh-------HH---H-------HHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC-----C
Confidence 0000 00 0 0011111111111111122222211111100 0
Q ss_pred hhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCC--CHHhHHHHHHHHHh
Q 010940 237 RVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGL--ATWQLLELGLGLEA 314 (497)
Q Consensus 237 ~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~--~~~~~~~~~~al~~ 314 (497)
......+.++ | ...+..+.+|+...+++++|||++||.... ..+.+..++++++.
T Consensus 205 ~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 3oti_A 205 EPEGWFMRWV-P----------------------YGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE 261 (398)
T ss_dssp CCCSBCCCCC-C----------------------CCCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT
T ss_pred CCCCCCcccc-C----------------------CCCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc
Confidence 0000001111 0 011334456776555667999999999653 56778889999998
Q ss_pred CCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeeccc
Q 010940 315 SSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPL 394 (497)
Q Consensus 315 ~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~ 394 (497)
.+.+++|+.++.... . +. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|.
T Consensus 262 ~~~~~v~~~g~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~ 327 (398)
T 3oti_A 262 VDADFVLALGDLDIS-P-----LG------TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPD 327 (398)
T ss_dssp SSSEEEEECTTSCCG-G-----GC------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CCCEEEEEECCcChh-h-----hc------cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCC
Confidence 899999988765321 1 11 12479999999999999999887 9999999999999999999999999
Q ss_pred cccccchH--HHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 395 FAEQFYNE--KLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 395 ~~DQ~~na--~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
..||..|| .++ ++.|+|+.++..+ .+++.|. ++++| ++++++++++++.+.+.
T Consensus 328 ~~dq~~~a~~~~~-~~~g~g~~~~~~~-------------~~~~~l~----~ll~~----~~~~~~~~~~~~~~~~~--- 382 (398)
T 3oti_A 328 PRDQFQHTAREAV-SRRGIGLVSTSDK-------------VDADLLR----RLIGD----ESLRTAAREVREEMVAL--- 382 (398)
T ss_dssp TTCCSSCTTHHHH-HHHTSEEECCGGG-------------CCHHHHH----HHHHC----HHHHHHHHHHHHHHHTS---
T ss_pred CchhHHHHHHHHH-HHCCCEEeeCCCC-------------CCHHHHH----HHHcC----HHHHHHHHHHHHHHHhC---
Confidence 99999999 999 5599999998766 7887776 78888 99999999999998742
Q ss_pred CCChHHHHHHHHHHH
Q 010940 473 GGSSHRNIEMLIEFV 487 (497)
Q Consensus 473 gg~~~~~~~~~~~~~ 487 (497)
.+ ...+.+.|+.+
T Consensus 383 ~~--~~~~~~~l~~l 395 (398)
T 3oti_A 383 PT--PAETVRRIVER 395 (398)
T ss_dssp CC--HHHHHHHHHHH
T ss_pred CC--HHHHHHHHHHH
Confidence 33 23555555554
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.2e-33 Score=285.33 Aligned_cols=364 Identities=13% Similarity=0.136 Sum_probs=233.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEe-eCCCccCC-----CCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQL-EFPSVESG-----LPQ 82 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i-~~~~~~~~-----~~~ 82 (497)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.++.. |+.+..+ +.+..... .+.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 46999999999999999999999999999999999987655555444 7888777 32110000 000
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHh-------hHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHHH
Q 010940 83 GCENMDKLPSRDLIKNFFHAASML-------KQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFAC 155 (497)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 155 (497)
................+......+ ...+.++++++ +||+||+|...+++..+|+.+|||++.+........
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTA 149 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccc
Confidence 000000011111111222222333 56678888888 999999998777788889999999998764421000
Q ss_pred HhhhhhhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhh-----ccCcEEEEcchHHhhHH
Q 010940 156 CCTHKLEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAE-----QSADGIVVNTFEELEAE 230 (497)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~le~~ 230 (497)
.. + ...+.....+..... ...+..+....++++..
T Consensus 150 ----------------~~---~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (391)
T 3tsa_A 150 ----------------GP---F---------------------SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS 189 (391)
T ss_dssp ----------------TH---H---------------------HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT
T ss_pred ----------------cc---c---------------------cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC
Confidence 00 0 000111111111111 01123232222221110
Q ss_pred HHHHHHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcC---CCHHhHHH
Q 010940 231 YVKEYKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICG---LATWQLLE 307 (497)
Q Consensus 231 ~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~---~~~~~~~~ 307 (497)
....+..+.|+ |. ..+..+..|+...+++++||+++||... ...+.+..
T Consensus 190 -----~~~~~~~~~~~-p~----------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~ 241 (391)
T 3tsa_A 190 -----DAPQGAPVQYV-PY----------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRA 241 (391)
T ss_dssp -----TSCCCEECCCC-CC----------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHH
T ss_pred -----CCCccCCeeee-cC----------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHH
Confidence 00000111111 10 0123445677655567799999999854 22667788
Q ss_pred HHHHHHhC-CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhhC
Q 010940 308 LGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAG 386 (497)
Q Consensus 308 ~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~G 386 (497)
++++ ++. +.+++|+.++.... . +. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|
T Consensus 242 ~~~~-~~~p~~~~v~~~~~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G 306 (391)
T 3tsa_A 242 VAAA-TELPGVEAVIAVPPEHRA-L-----LT------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLG 306 (391)
T ss_dssp HHHH-HTSTTEEEEEECCGGGGG-G-----CT------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTT
T ss_pred HHHh-ccCCCeEEEEEECCcchh-h-----cc------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhC
Confidence 8888 877 67888887654311 1 11 13479999999999999988877 99999999999999999
Q ss_pred CceeeccccccccchHHHHHHHHcceEEecc--ccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 010940 387 VPLVTCPLFAEQFYNEKLAVQVLGIGVSVGI--EAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGE 464 (497)
Q Consensus 387 vP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~--~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~ 464 (497)
+|+|++|...||+.|+.++ ++.|+|+.+.. .+ .++++|.++|.++++| ++++++++++++
T Consensus 307 ~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~-------------~~~~~l~~ai~~ll~~----~~~~~~~~~~~~ 368 (391)
T 3tsa_A 307 IPQLVLPQYFDQFDYARNL-AAAGAGICLPDEQAQ-------------SDHEQFTDSIATVLGD----TGFAAAAIKLSD 368 (391)
T ss_dssp CCEEECCCSTTHHHHHHHH-HHTTSEEECCSHHHH-------------TCHHHHHHHHHHHHTC----THHHHHHHHHHH
T ss_pred CCEEecCCcccHHHHHHHH-HHcCCEEecCccccc-------------CCHHHHHHHHHHHHcC----HHHHHHHHHHHH
Confidence 9999999999999999999 55999999987 65 8899999999999998 889999998888
Q ss_pred HHHHHhccCCChHHHHHHHHHHHHh
Q 010940 465 IANRAIGVGGSSHRNIEMLIEFVIQ 489 (497)
Q Consensus 465 ~~~~a~~~gg~~~~~~~~~~~~~~~ 489 (497)
.+.+ +++. ..+.+.|+.+..
T Consensus 369 ~~~~----~~~~-~~~~~~i~~~~~ 388 (391)
T 3tsa_A 369 EITA----MPHP-AALVRTLENTAA 388 (391)
T ss_dssp HHHT----SCCH-HHHHHHHHHC--
T ss_pred HHHc----CCCH-HHHHHHHHHHHh
Confidence 8763 2333 355555555443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=5.2e-31 Score=267.81 Aligned_cols=366 Identities=17% Similarity=0.193 Sum_probs=239.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCc-----------
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSV----------- 76 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~----------- 76 (497)
.+|||+|++.++.||++|++.||++|+++||+|++++++...+.++.. |+.+..++....
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhh
Confidence 579999999999999999999999999999999999988654444433 788888863000
Q ss_pred -cCCCCCCCCCCCCCCChhHHHHHHHH-HHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHHH
Q 010940 77 -ESGLPQGCENMDKLPSRDLIKNFFHA-ASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCFA 154 (497)
Q Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 154 (497)
....+. ........ .....+... .......+.+++++. +||+||+|....++..+|+.+|||++.+.......
T Consensus 90 ~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 90 DTDSPEG-LTPEQLSE--LPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp SCSCCTT-CCHHHHTT--SHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred cccCCcc-CChhHhhH--HHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 000000 00000000 111111111 233346677788888 99999999876777888999999999865432100
Q ss_pred HHhhhhhhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhh----------hccCcEEEEcch
Q 010940 155 CCCTHKLEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAA----------EQSADGIVVNTF 224 (497)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~ 224 (497)
++.. ..+.....+.... ....+.++..+-
T Consensus 165 --------------------~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~ 203 (412)
T 3otg_A 165 --------------------DDLT---------------------RSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFP 203 (412)
T ss_dssp --------------------SHHH---------------------HHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSC
T ss_pred --------------------hhhh---------------------HHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCC
Confidence 0000 0011111111111 012233333332
Q ss_pred HHhhHHHHHHHHhhcCCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhccc-ccCCCCCeEEEEeeCCCcCCCHH
Q 010940 225 EELEAEYVKEYKRVKGDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKW-LDSWEPGSVIYACLGSICGLATW 303 (497)
Q Consensus 225 ~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~V~vs~GS~~~~~~~ 303 (497)
..++.. ...+......+-+... .......+| ....+++++||+++||......+
T Consensus 204 ~~~~~~-----~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~ 258 (412)
T 3otg_A 204 PSLQEP-----EFRARPRRHELRPVPF--------------------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVE 258 (412)
T ss_dssp GGGSCH-----HHHTCTTEEECCCCCC--------------------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHH
T ss_pred HHhcCC-----cccCCCCcceeeccCC--------------------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHH
Confidence 222211 1111111111111100 012233445 22233456999999999755678
Q ss_pred hHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHH
Q 010940 304 QLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGV 383 (497)
Q Consensus 304 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal 383 (497)
.+..++++++..+..++|+.+.+.....++. .++|+.+.+|+|+..+|.++++ ||+|||.||++||+
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~-----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~ 325 (412)
T 3otg_A 259 VLRAAIDGLAGLDADVLVASGPSLDVSGLGE-----------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGAL 325 (412)
T ss_dssp HHHHHHHHHHTSSSEEEEECCSSCCCTTCCC-----------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCCCChhhhcc-----------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHH
Confidence 8888999999888899998887652222211 2479999999999999999988 99999999999999
Q ss_pred hhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q 010940 384 SAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLG 463 (497)
Q Consensus 384 ~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~ 463 (497)
++|+|+|++|...||..|+..+ ++.|+|..+...+ +++++|.++|.++++| +++++++++.+
T Consensus 326 a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~~-------------~~~~~l~~ai~~ll~~----~~~~~~~~~~~ 387 (412)
T 3otg_A 326 GAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLLPDN-------------ISPDSVSGAAKRLLAE----ESYRAGARAVA 387 (412)
T ss_dssp HHTCCEEECCCSTTHHHHHHHH-HHHTSEEECCGGG-------------CCHHHHHHHHHHHHHC----HHHHHHHHHHH
T ss_pred HhCCCEEecCCchhHHHHHHHH-HHcCCEEecCccc-------------CCHHHHHHHHHHHHhC----HHHHHHHHHHH
Confidence 9999999999999999999999 5599999998876 8999999999999998 88898888888
Q ss_pred HHHHHHhccCCChHHHHHHHHHHHHh
Q 010940 464 EIANRAIGVGGSSHRNIEMLIEFVIQ 489 (497)
Q Consensus 464 ~~~~~a~~~gg~~~~~~~~~~~~~~~ 489 (497)
+.+.+. . + ...+.+.++++..
T Consensus 388 ~~~~~~---~-~-~~~~~~~~~~l~~ 408 (412)
T 3otg_A 388 AEIAAM---P-G-PDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHS---C-C-HHHHHTTHHHHHC
T ss_pred HHHhcC---C-C-HHHHHHHHHHHhc
Confidence 887642 3 3 3355555555543
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=8.4e-29 Score=247.19 Aligned_cols=342 Identities=15% Similarity=0.136 Sum_probs=205.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcc--hhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTT--RFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENM 87 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~--~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~ 87 (497)
.||+|+..++.||++|.++||++|+++||+|+|++++...+ .+... |++++.++.. +++..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~----~~~~~---- 65 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVS----GLRGK---- 65 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC---------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECC----CcCCC----
Confidence 48999999999999999999999999999999999775432 22222 7888888632 22111
Q ss_pred CCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCc--chHHHHHHcCCCeEEEccchHHHHHhhhhhhhcc
Q 010940 88 DKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLP--WTVNSAIKFKIPTILFDGMGCFACCCTHKLEISK 165 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 165 (497)
...........++... ....+++++. +||+||++.-.. .+..+|+.+|||++..-
T Consensus 66 ~~~~~~~~~~~~~~~~----~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe----------------- 122 (365)
T 3s2u_A 66 GLKSLVKAPLELLKSL----FQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHE----------------- 122 (365)
T ss_dssp -------CHHHHHHHH----HHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEE-----------------
T ss_pred CHHHHHHHHHHHHHHH----HHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEe-----------------
Confidence 0001111111222222 2344567777 999999987443 44567899999998621
Q ss_pred CCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHHHhhcCCcEEE
Q 010940 166 VSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEYKRVKGDKVWC 245 (497)
Q Consensus 166 ~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~v~~ 245 (497)
...+||+.+ ++.. +.++.+ ..++++.. ...+++.+
T Consensus 123 -----~n~~~G~~n------------------------r~l~------~~a~~v-~~~~~~~~---------~~~~k~~~ 157 (365)
T 3s2u_A 123 -----QNAVAGTAN------------------------RSLA------PIARRV-CEAFPDTF---------PASDKRLT 157 (365)
T ss_dssp -----CSSSCCHHH------------------------HHHG------GGCSEE-EESSTTSS---------CC---CEE
T ss_pred -----cchhhhhHH------------------------Hhhc------ccccee-eecccccc---------cCcCcEEE
Confidence 122233221 1111 112222 23333211 11246677
Q ss_pred eccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHHhC----CCCEEE
Q 010940 246 IGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLEAS----SQPFIW 321 (497)
Q Consensus 246 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~ 321 (497)
+|........ .+..-...++ +++++|+|..||..... ....+.++++.+ +..++|
T Consensus 158 ~g~pvr~~~~-----------------~~~~~~~~~~--~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~ 216 (365)
T 3s2u_A 158 TGNPVRGELF-----------------LDAHARAPLT--GRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRH 216 (365)
T ss_dssp CCCCCCGGGC-----------------CCTTSSCCCT--TSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEE
T ss_pred ECCCCchhhc-----------------cchhhhcccC--CCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEE
Confidence 7765322110 0111111222 23458999999987532 233455666544 345677
Q ss_pred EEeCCCCCCCccccccchhHHH--HhCCCCeEeccccchH-HhhhcCCccccccCCCchhHHHHHhhCCceeecccc---
Q 010940 322 VIRGGERSQGLEKWIQEEGFEE--RTTGRGFIIRGWAPQV-LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLF--- 395 (497)
Q Consensus 322 ~~~~~~~~~~~~~~~lp~~~~~--~~~~~nv~v~~~~pq~-~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~--- 395 (497)
+++.+.. +.+.+ +....++.+.+|+++. ++|..+++ +|||+|.+|++|++++|+|+|++|+.
T Consensus 217 ~~G~~~~----------~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~ 284 (365)
T 3s2u_A 217 QAGRQHA----------EITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAI 284 (365)
T ss_dssp ECCTTTH----------HHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----
T ss_pred ecCcccc----------ccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCC
Confidence 7665432 12211 2235688889999985 69999998 99999999999999999999999974
Q ss_pred -ccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCC
Q 010940 396 -AEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGG 474 (497)
Q Consensus 396 -~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg 474 (497)
.+|..||+.+ ++.|+|+.++.++ ++++.|.++|.++++|++...+|++++++++ .
T Consensus 285 ~~~Q~~NA~~l-~~~G~a~~l~~~~-------------~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~----------~ 340 (365)
T 3s2u_A 285 DDHQTRNAEFL-VRSGAGRLLPQKS-------------TGAAELAAQLSEVLMHPETLRSMADQARSLA----------K 340 (365)
T ss_dssp CCHHHHHHHHH-HTTTSEEECCTTT-------------CCHHHHHHHHHHHHHCTHHHHHHHHHHHHTC----------C
T ss_pred CcHHHHHHHHH-HHCCCEEEeecCC-------------CCHHHHHHHHHHHHCCHHHHHHHHHHHHhcC----------C
Confidence 4799999999 5599999998776 8999999999999999444444444443331 1
Q ss_pred ChHHHHHHHHHHHHhhhccCC
Q 010940 475 SSHRNIEMLIEFVIQQTRGQE 495 (497)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~ 495 (497)
. ++.+++++.+.+.-+|.|
T Consensus 341 ~--~aa~~ia~~i~~larG~e 359 (365)
T 3s2u_A 341 P--EATRTVVDACLEVARGLE 359 (365)
T ss_dssp T--THHHHHHHHHHHHC----
T ss_pred c--cHHHHHHHHHHHHHccch
Confidence 1 245555566656666655
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.2e-26 Score=206.03 Aligned_cols=163 Identities=23% Similarity=0.369 Sum_probs=138.7
Q ss_pred cCcchhcccccCCCCCeEEEEeeCCCcC-CCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCe
Q 010940 272 DDYEQCLKWLDSWEPGSVIYACLGSICG-LATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGF 350 (497)
Q Consensus 272 ~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv 350 (497)
.+++++.+|++..+++++|||++||... ...+.+..++++++..+.+++|+.++..... + ++|+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~------~---------~~~v 70 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDT------L---------GLNT 70 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTT------C---------CTTE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCccc------C---------CCcE
Confidence 4678999999876666799999999974 4567788899999988899999987543211 2 3789
Q ss_pred EeccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccc
Q 010940 351 IIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSG 430 (497)
Q Consensus 351 ~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~ 430 (497)
.+.+|+||..+|.|+.+++||||||+||++||+++|+|+|++|...||..||.++ ++.|+|+.++..+
T Consensus 71 ~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~~----------- 138 (170)
T 2o6l_A 71 RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFNT----------- 138 (170)
T ss_dssp EEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTTT-----------
T ss_pred EEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEecccc-----------
Confidence 9999999999997777777999999999999999999999999999999999999 5599999998765
Q ss_pred cccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHH
Q 010940 431 LVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIAN 467 (497)
Q Consensus 431 ~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~ 467 (497)
+++++|.++|.++++| ++|+++++++++.++
T Consensus 139 --~~~~~l~~~i~~ll~~----~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 139 --MSSTDLLNALKRVIND----PSYKENVMKLSRIQH 169 (170)
T ss_dssp --CCHHHHHHHHHHHHHC----HHHHHHHHHHC----
T ss_pred --CCHHHHHHHHHHHHcC----HHHHHHHHHHHHHhh
Confidence 8999999999999998 899999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.82 E-value=2.3e-18 Score=171.32 Aligned_cols=307 Identities=14% Similarity=0.122 Sum_probs=187.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcc--hhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTT--RFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCEN 86 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~--~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~ 86 (497)
+|||++++.+..||..+.+.||++|+++||+|++++...... .+.. .++++..++.. .+..
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~----~~~~---- 68 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRIS----GLRG---- 68 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCC----CCTT----
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCC----ccCc----
Confidence 379999998888999999999999999999999999765321 1111 26777777532 1111
Q ss_pred CCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC--cchHHHHHHcCCCeEEEccchHHHHHhhhhhhhc
Q 010940 87 MDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL--PWTVNSAIKFKIPTILFDGMGCFACCCTHKLEIS 164 (497)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 164 (497)
......+..... .......+.+++++. +||+|+++... ..+..+++.+|+|++......
T Consensus 69 ---~~~~~~~~~~~~-~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------- 129 (364)
T 1f0k_A 69 ---KGIKALIAAPLR-IFNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------- 129 (364)
T ss_dssp ---CCHHHHHTCHHH-HHHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-------------
T ss_pred ---CccHHHHHHHHH-HHHHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-------------
Confidence 000111100111 111233466677777 99999998743 234557888999998533210
Q ss_pred cCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHHHhhcCCcEE
Q 010940 165 KVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEYKRVKGDKVW 244 (497)
Q Consensus 165 ~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~v~ 244 (497)
.++. ...+ .....+.+++.+ ... + +++.
T Consensus 130 ---------~~~~------------------------~~~~------~~~~~d~v~~~~-~~~-----------~-~~~~ 157 (364)
T 1f0k_A 130 ---------IAGL------------------------TNKW------LAKIATKVMQAF-PGA-----------F-PNAE 157 (364)
T ss_dssp ---------SCCH------------------------HHHH------HTTTCSEEEESS-TTS-----------S-SSCE
T ss_pred ---------CCcH------------------------HHHH------HHHhCCEEEecC-hhh-----------c-CCce
Confidence 0000 1111 112344444432 211 2 2556
Q ss_pred EeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHHhC--CCCEEEE
Q 010940 245 CIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLEAS--SQPFIWV 322 (497)
Q Consensus 245 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~ 322 (497)
++|........ . .....+.+...+++++|++..|+... ......++++++.+ +.++++.
T Consensus 158 ~i~n~v~~~~~-------------~----~~~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i 218 (364)
T 1f0k_A 158 VVGNPVRTDVL-------------A----LPLPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQ 218 (364)
T ss_dssp ECCCCCCHHHH-------------T----SCCHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEE
T ss_pred EeCCccchhhc-------------c----cchhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEE
Confidence 66644211100 0 00011111122234578888888753 33444455666544 3555666
Q ss_pred EeCCCCCCCccccccchhHHHHhCCCCeEeccccch-HHhhhcCCccccccCCCchhHHHHHhhCCceeecccc---ccc
Q 010940 323 IRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQ-VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLF---AEQ 398 (497)
Q Consensus 323 ~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq-~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~---~DQ 398 (497)
.|.+.. .. +.+ .-.+...+|+.+.+|+++ ..+|..+++ +|+++|.+++.||+++|+|+|+.|.. .||
T Consensus 219 ~G~~~~-~~-----l~~-~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q 289 (364)
T 1f0k_A 219 SGKGSQ-QS-----VEQ-AYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQ 289 (364)
T ss_dssp CCTTCH-HH-----HHH-HHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHH
T ss_pred cCCchH-HH-----HHH-HHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhH
Confidence 665431 10 111 111222258999999954 679999988 99999989999999999999999987 799
Q ss_pred cchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHH
Q 010940 399 FYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKL 445 (497)
Q Consensus 399 ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v 445 (497)
..|+..+.+ .|.|..++..+ ++.+++.++|.++
T Consensus 290 ~~~~~~~~~-~g~g~~~~~~d-------------~~~~~la~~i~~l 322 (364)
T 1f0k_A 290 YWNALPLEK-AGAAKIIEQPQ-------------LSVDAVANTLAGW 322 (364)
T ss_dssp HHHHHHHHH-TTSEEECCGGG-------------CCHHHHHHHHHTC
T ss_pred HHHHHHHHh-CCcEEEecccc-------------CCHHHHHHHHHhc
Confidence 999999944 89999888765 7799999999988
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.56 E-value=7.1e-15 Score=133.92 Aligned_cols=132 Identities=13% Similarity=0.059 Sum_probs=94.9
Q ss_pred CCeEEEEeeCCCcCCCHHhHHHH-----HHHHHhCC-CCEEEEEeCCCCCCCccccccchhHHHHh--------------
Q 010940 286 PGSVIYACLGSICGLATWQLLEL-----GLGLEASS-QPFIWVIRGGERSQGLEKWIQEEGFEERT-------------- 345 (497)
Q Consensus 286 ~~~~V~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-------------- 345 (497)
++++|||+.||... -.+.+..+ +++|...+ .++++++|..... ..+.+.++.
T Consensus 27 ~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 27 EEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp CSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccccccc
Confidence 45699999999842 23333333 48888877 7999999876541 011111111
Q ss_pred -------------CCCCeEeccccchH-Hhhh-cCCccccccCCCchhHHHHHhhCCceeecccc----ccccchHHHHH
Q 010940 346 -------------TGRGFIIRGWAPQV-LLLS-HRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLF----AEQFYNEKLAV 406 (497)
Q Consensus 346 -------------~~~nv~v~~~~pq~-~lL~-~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~----~DQ~~na~~~~ 406 (497)
..-++.+.+|+++. .+|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l- 175 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF- 175 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-
T ss_pred cccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-
Confidence 01245677888875 7999 9998 99999999999999999999999984 3699999999
Q ss_pred HHHcceEEeccccccccccccccccccCHHHHHHHHHHHH
Q 010940 407 QVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLM 446 (497)
Q Consensus 407 ~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 446 (497)
++.|+|+.+ +++.|.++|.++.
T Consensus 176 ~~~G~~~~~------------------~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 176 VELGYVWSC------------------APTETGLIAGLRA 197 (224)
T ss_dssp HHHSCCCEE------------------CSCTTTHHHHHHH
T ss_pred HHCCCEEEc------------------CHHHHHHHHHHHH
Confidence 559998755 2455777777763
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.54 E-value=1.4e-13 Score=130.61 Aligned_cols=118 Identities=8% Similarity=-0.012 Sum_probs=89.7
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHh-CCCCeEeccccchH-Hhhhc
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERT-TGRGFIIRGWAPQV-LLLSH 364 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~-~lL~~ 364 (497)
.+.|+|++|..... .....++++|.... ++.++.+.+.. ..+.+.+.. ..+|+.+..|+++. .+|..
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~ 225 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAKLHNNIRLFIDHENIAKLMNE 225 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHHTCSSEEEEESCSCHHHHHHT
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHH
Confidence 45899999965432 34556778876544 57777776543 113333322 23589999999886 49988
Q ss_pred CCccccccCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEecccc
Q 010940 365 RAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 365 ~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
+++ +|++|| +|++|+++.|+|+|++|...+|..||+.+ ++.|+++.+..-+
T Consensus 226 aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~~ 276 (282)
T 3hbm_A 226 SNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYLE 276 (282)
T ss_dssp EEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGGS
T ss_pred CCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchhh
Confidence 888 999999 89999999999999999999999999999 5599999887643
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.43 E-value=1.1e-10 Score=116.71 Aligned_cols=328 Identities=12% Similarity=0.054 Sum_probs=178.3
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCC
Q 010940 7 AHQLHFVLIPL--M--SPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQ 82 (497)
Q Consensus 7 ~~~~~il~~~~--p--~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~ 82 (497)
|++|||++++. + ..|.-.....|++.| +||+|++++........... ....++.+..++...
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~------- 67 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY-----DKTLDYEVIRWPRSV------- 67 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH-----HTTCSSEEEEESSSS-------
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh-----ccccceEEEEccccc-------
Confidence 34678999875 3 468888899999999 79999999977654321111 233367777775210
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC--cchHHHHHHcCCC-eEEEccchHHHHHhhh
Q 010940 83 GCENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL--PWTVNSAIKFKIP-TILFDGMGCFACCCTH 159 (497)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~ 159 (497)
..... .....+.+++++. +||+|++.... .....+++.+++| ++..........
T Consensus 68 ------~~~~~-----------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---- 124 (394)
T 3okp_A 68 ------MLPTP-----------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---- 124 (394)
T ss_dssp ------CCSCH-----------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH----
T ss_pred ------cccch-----------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh----
Confidence 00111 2234466777777 99999987643 3445568889998 443333211100
Q ss_pred hhhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHHHhhc
Q 010940 160 KLEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEYKRVK 239 (497)
Q Consensus 160 ~~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~ 239 (497)
. .. .....+. ......++.++..+-...+ .+...+
T Consensus 125 ------------------~----------------~~---~~~~~~~---~~~~~~~d~ii~~s~~~~~-----~~~~~~ 159 (394)
T 3okp_A 125 ------------------S----------------ML---PGSRQSL---RKIGTEVDVLTYISQYTLR-----RFKSAF 159 (394)
T ss_dssp ------------------T----------------TS---HHHHHHH---HHHHHHCSEEEESCHHHHH-----HHHHHH
T ss_pred ------------------h----------------hc---chhhHHH---HHHHHhCCEEEEcCHHHHH-----HHHHhc
Confidence 0 00 0011112 2233556777766654222 122222
Q ss_pred --CCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHHhC--
Q 010940 240 --GDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLEAS-- 315 (497)
Q Consensus 240 --~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-- 315 (497)
..++..|.......... . ........+.+.+.-. ++..+++..|+... ...+..++++++.+
T Consensus 160 ~~~~~~~vi~ngv~~~~~~-~----------~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~ 225 (394)
T 3okp_A 160 GSHPTFEHLPSGVDVKRFT-P----------ATPEDKSATRKKLGFT-DTTPVIACNSRLVP--RKGQDSLIKAMPQVIA 225 (394)
T ss_dssp CSSSEEEECCCCBCTTTSC-C----------CCHHHHHHHHHHTTCC-TTCCEEEEESCSCG--GGCHHHHHHHHHHHHH
T ss_pred CCCCCeEEecCCcCHHHcC-C----------CCchhhHHHHHhcCCC-cCceEEEEEecccc--ccCHHHHHHHHHHHHh
Confidence 24666665432111100 0 0000012222222222 22256677788643 23334445554322
Q ss_pred ---CCCEEEEEeCCCCCCCccccccchhHHHH--hCCCCeEeccccchHH---hhhcCCcccccc-----------CCCc
Q 010940 316 ---SQPFIWVIRGGERSQGLEKWIQEEGFEER--TTGRGFIIRGWAPQVL---LLSHRAIGGFLT-----------HCGW 376 (497)
Q Consensus 316 ---~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~nv~v~~~~pq~~---lL~~~~~~~~I~-----------HgG~ 376 (497)
+.+++ .+|.+... +.+++. ...+++.+.+|+|+.+ ++..+++ +|. -|..
T Consensus 226 ~~~~~~l~-i~G~g~~~---------~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~ 293 (394)
T 3okp_A 226 ARPDAQLL-IVGSGRYE---------STLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLG 293 (394)
T ss_dssp HSTTCEEE-EECCCTTH---------HHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSC
T ss_pred hCCCeEEE-EEcCchHH---------HHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccC
Confidence 33444 34433221 222221 1237899999998655 6777888 554 4445
Q ss_pred hhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHH
Q 010940 377 NSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRR 456 (497)
Q Consensus 377 gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~ 456 (497)
+++.||+++|+|+|+.+.. .....+ + .|.|..++. -+.+++.++|.++++|++....+.
T Consensus 294 ~~~~Ea~a~G~PvI~~~~~----~~~e~i-~-~~~g~~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~ 352 (394)
T 3okp_A 294 IVYLEAQACGVPVIAGTSG----GAPETV-T-PATGLVVEG---------------SDVDKLSELLIELLDDPIRRAAMG 352 (394)
T ss_dssp HHHHHHHHTTCCEEECSST----TGGGGC-C-TTTEEECCT---------------TCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cHHHHHHHcCCCEEEeCCC----ChHHHH-h-cCCceEeCC---------------CCHHHHHHHHHHHHhCHHHHHHHH
Confidence 7899999999999997643 233333 4 347777765 368999999999999843334444
Q ss_pred HHHHHHH
Q 010940 457 KRARQLG 463 (497)
Q Consensus 457 ~~a~~~~ 463 (497)
+++++..
T Consensus 353 ~~~~~~~ 359 (394)
T 3okp_A 353 AAGRAHV 359 (394)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.42 E-value=1.6e-10 Score=117.56 Aligned_cols=377 Identities=14% Similarity=0.085 Sum_probs=188.0
Q ss_pred CCcEEEEEcC---C--------CccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCc
Q 010940 8 HQLHFVLIPL---M--------SPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSV 76 (497)
Q Consensus 8 ~~~~il~~~~---p--------~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~ 76 (497)
++|||++++. | ..|+-.....||+.|.++||+|++++.......-... ....++.+..++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGPY 93 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSCS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCCc
Confidence 5689999995 2 3678889999999999999999999866432111000 0112677777753211
Q ss_pred cCCCCCCCCCCCCCCChhHHHHHHHHHHHhhHHHHHH-HhhcCCCCcEEEeCCCC--cchHHHHHHcCCCeEEEccchHH
Q 010940 77 ESGLPQGCENMDKLPSRDLIKNFFHAASMLKQPFEQL-FDKLHPRPSCIISGKNL--PWTVNSAIKFKIPTILFDGMGCF 153 (497)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-l~~~~~~pDlvI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~ 153 (497)
. .+ ........+.. +...+.+. ++.. .+||+|++.... ..+..+++.+++|+|........
T Consensus 94 ~-~~-------~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~ 157 (438)
T 3c48_A 94 E-GL-------SKEELPTQLAA-------FTGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA 157 (438)
T ss_dssp S-SC-------CGGGGGGGHHH-------HHHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred c-cc-------chhHHHHHHHH-------HHHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcc
Confidence 0 00 00000011111 11122222 3333 149999987632 23334677789999886654321
Q ss_pred HHHhhhhhhhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHH
Q 010940 154 ACCCTHKLEISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVK 233 (497)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~ 233 (497)
... ..+.. ............ .......++.++..+-...+
T Consensus 158 ~~~------------------~~~~~---------------~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~----- 197 (438)
T 3c48_A 158 VKN------------------SYRDD---------------SDTPESEARRIC--EQQLVDNADVLAVNTQEEMQ----- 197 (438)
T ss_dssp HHS------------------CC-------------------CCHHHHHHHHH--HHHHHHHCSEEEESSHHHHH-----
T ss_pred ccc------------------ccccc---------------cCCcchHHHHHH--HHHHHhcCCEEEEcCHHHHH-----
Confidence 100 00000 000000011111 12233557777776654322
Q ss_pred HHHhhc---CCcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHH
Q 010940 234 EYKRVK---GDKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGL 310 (497)
Q Consensus 234 ~~~~~~---~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~ 310 (497)
.+...+ ..++..|.......... . ........+.+-+.-. ++..+++..|+... ......+++
T Consensus 198 ~~~~~~g~~~~k~~vi~ngvd~~~~~-~----------~~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~ 263 (438)
T 3c48_A 198 DLMHHYDADPDRISVVSPGADVELYS-P----------GNDRATERSRRELGIP-LHTKVVAFVGRLQP--FKGPQVLIK 263 (438)
T ss_dssp HHHHHHCCCGGGEEECCCCCCTTTSC-C----------C----CHHHHHHTTCC-SSSEEEEEESCBSG--GGCHHHHHH
T ss_pred HHHHHhCCChhheEEecCCccccccC-C----------cccchhhhhHHhcCCC-CCCcEEEEEeeecc--cCCHHHHHH
Confidence 122212 13566665442111100 0 0000000122222211 22256677788754 233344445
Q ss_pred HHHhC-----CCCE-EEEEeCCCCCCCccccccchhHHH---Hh-CCCCeEeccccchH---HhhhcCCccccccCC---
Q 010940 311 GLEAS-----SQPF-IWVIRGGERSQGLEKWIQEEGFEE---RT-TGRGFIIRGWAPQV---LLLSHRAIGGFLTHC--- 374 (497)
Q Consensus 311 al~~~-----~~~~-i~~~~~~~~~~~~~~~~lp~~~~~---~~-~~~nv~v~~~~pq~---~lL~~~~~~~~I~Hg--- 374 (497)
+++.+ +..+ ++.+|.....+. ..+.+.+ +. ..+++.+.+++|+. .++..+++ +|.-.
T Consensus 264 a~~~l~~~~p~~~~~l~i~G~~~~~g~-----~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e 336 (438)
T 3c48_A 264 AVAALFDRDPDRNLRVIICGGPSGPNA-----TPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNE 336 (438)
T ss_dssp HHHHHHHHCTTCSEEEEEECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCC
T ss_pred HHHHHHhhCCCcceEEEEEeCCCCCCc-----HHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECcccc
Confidence 44332 1133 333443110000 1122221 11 25789999999864 47888888 66442
Q ss_pred -CchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhH
Q 010940 375 -GWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGE 453 (497)
Q Consensus 375 -G~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~ 453 (497)
..+++.||+++|+|+|+.+. ......+ +.-+.|+.++. -+.+++.++|.++++|++...
T Consensus 337 ~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~---------------~d~~~la~~i~~l~~~~~~~~ 396 (438)
T 3c48_A 337 SFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVDG---------------HSPHAWADALATLLDDDETRI 396 (438)
T ss_dssp SSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEESS---------------CCHHHHHHHHHHHHHCHHHHH
T ss_pred CCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECCC---------------CCHHHHHHHHHHHHcCHHHHH
Confidence 24689999999999998753 3444445 43457877765 368999999999999855555
Q ss_pred HHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhhh
Q 010940 454 KRRKRARQLGEIANRAIGVGGSSHRNIEMLIEFVIQQT 491 (497)
Q Consensus 454 ~~~~~a~~~~~~~~~a~~~gg~~~~~~~~~~~~~~~~~ 491 (497)
.+.+++++..+.+. . +. ..+.+.++++.+...+
T Consensus 397 ~~~~~~~~~~~~~s-~-~~---~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 397 RMGEDAVEHARTFS-W-AA---TAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHHHHHHHHHHH-H-HH---HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCC-H-HH---HHHHHHHHHHHHhhhc
Confidence 66666666655532 1 11 2335556666665544
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.34 E-value=1e-09 Score=110.06 Aligned_cols=322 Identities=9% Similarity=0.060 Sum_probs=167.1
Q ss_pred CCcEEEEEcCC---C-ccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCC
Q 010940 8 HQLHFVLIPLM---S-PGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQG 83 (497)
Q Consensus 8 ~~~~il~~~~p---~-~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~ 83 (497)
.+|||++++.. . .|.-.-...+++.|.++||+|++++............ ...+ ++..++.. .
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~-----~~~~-~~~~~~~~-------~- 84 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV-----VSGG-KAVPIPYN-------G- 84 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE-----EECC-CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc-----ccCC-cEEecccc-------C-
Confidence 46899999852 2 5666889999999999999999999775432111110 0001 11112110 0
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCc--chHHHHHHcCCCeEEEccchHHHHHhhhhh
Q 010940 84 CENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLP--WTVNSAIKFKIPTILFDGMGCFACCCTHKL 161 (497)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 161 (497)
... .+ .........+.+++++. +||+|++..... .+..+++..++|++.......
T Consensus 85 --~~~---------~~-~~~~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~--------- 141 (406)
T 2gek_A 85 --SVA---------RL-RFGPATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST--------- 141 (406)
T ss_dssp ------------------CCHHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC---------
T ss_pred --Ccc---------cc-cccHHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc---------
Confidence 000 00 00011224466677777 999999877443 334567777999987554310
Q ss_pred hhccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHHHhhcC-
Q 010940 162 EISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEYKRVKG- 240 (497)
Q Consensus 162 ~~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~- 240 (497)
+. .. ....+..........++.++..+-...+ .+...++
T Consensus 142 ----------------~~------~~-------------~~~~~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~~ 181 (406)
T 2gek_A 142 ----------------TK------SL-------------TLSVFQGILRPYHEKIIGRIAVSDLARR-----WQMEALGS 181 (406)
T ss_dssp ----------------CS------HH-------------HHHHHHSTTHHHHTTCSEEEESSHHHHH-----HHHHHHSS
T ss_pred ----------------hh------hh-------------hHHHHHHHHHHHHhhCCEEEECCHHHHH-----HHHHhcCC
Confidence 00 00 0001111111233566777766644222 1222232
Q ss_pred CcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCC-cCCCHHhHHHHHHHHHhC----
Q 010940 241 DKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSI-CGLATWQLLELGLGLEAS---- 315 (497)
Q Consensus 241 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~-~~~~~~~~~~~~~al~~~---- 315 (497)
+++ .|... ..... . ........ +.. +..+++..|+. .. ......++++++.+
T Consensus 182 ~~~-vi~~~-v~~~~----~--------~~~~~~~~----~~~---~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~ 238 (406)
T 2gek_A 182 DAV-EIPNG-VDVAS----F--------ADAPLLDG----YPR---EGRTVLFLGRYDEP--RKGMAVLLAALPKLVARF 238 (406)
T ss_dssp CEE-ECCCC-BCHHH----H--------HTCCCCTT----CSC---SSCEEEEESCTTSG--GGCHHHHHHHHHHHHTTS
T ss_pred CcE-EecCC-CChhh----c--------CCCchhhh----ccC---CCeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHC
Confidence 344 44433 11100 0 00000000 111 12466677877 43 22334444554332
Q ss_pred -CCCEEEEEeCCCCCCCccccccchhHHHHhC--CCCeEeccccchH---HhhhcCCcccccc----CCCc-hhHHHHHh
Q 010940 316 -SQPFIWVIRGGERSQGLEKWIQEEGFEERTT--GRGFIIRGWAPQV---LLLSHRAIGGFLT----HCGW-NSTLEGVS 384 (497)
Q Consensus 316 -~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~v~~~~pq~---~lL~~~~~~~~I~----HgG~-gt~~eal~ 384 (497)
+.++ +.+|.+.. +.+.+... .+|+.+.+++++. .++..+++ +|. +.|. +++.||++
T Consensus 239 ~~~~l-~i~G~~~~----------~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a 305 (406)
T 2gek_A 239 PDVEI-LIVGRGDE----------DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMA 305 (406)
T ss_dssp TTCEE-EEESCSCH----------HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHH
T ss_pred CCeEE-EEEcCCcH----------HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHH
Confidence 2333 34443321 12222111 5789999999975 68888888 553 3344 48999999
Q ss_pred hCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHH
Q 010940 385 AGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQL 462 (497)
Q Consensus 385 ~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~ 462 (497)
+|+|+|+.+. ......+ +..+.|..++. -+.+++.++|.++++|++....+.+++++.
T Consensus 306 ~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 363 (406)
T 2gek_A 306 AGTAVVASDL----DAFRRVL-ADGDAGRLVPV---------------DDADGMAAALIGILEDDQLRAGYVARASER 363 (406)
T ss_dssp HTCEEEECCC----HHHHHHH-TTTTSSEECCT---------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cCCCEEEecC----CcHHHHh-cCCCceEEeCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999754 4455555 53567877765 358999999999999833333333444333
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.33 E-value=2e-10 Score=114.40 Aligned_cols=128 Identities=19% Similarity=0.225 Sum_probs=82.5
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhC-----CCCEEEEEeCCCCCCCccccccchhHHHHh-CCCCeEeccccch--
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEAS-----SQPFIWVIRGGERSQGLEKWIQEEGFEERT-TGRGFIIRGWAPQ-- 358 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq-- 358 (497)
+++|+++.|...... .+..++++++.+ +..+++..+.+.. +-+.+++.. ..+++.+.+++++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV--------VREAVFPVLKGVRNFVLLDPLEYGS 267 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH--------HHHHHHHHhccCCCEEEECCCCHHH
Confidence 347777777553221 345566666432 3344444343211 112232222 2368988866655
Q ss_pred -HHhhhcCCccccccCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHH
Q 010940 359 -VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 359 -~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 437 (497)
..+|..+++ ||+++| |.+.||+++|+|+|+.+...++... + + .|.|+.++ .++++
T Consensus 268 ~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv~----------------~d~~~ 323 (376)
T 1v4v_A 268 MAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLAG----------------TDPEG 323 (376)
T ss_dssp HHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEECC----------------SCHHH
T ss_pred HHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEECC----------------CCHHH
Confidence 478888887 998884 4456999999999998876666552 3 4 68887663 35899
Q ss_pred HHHHHHHHHcC
Q 010940 438 VKEAIEKLMDR 448 (497)
Q Consensus 438 l~~ai~~vl~~ 448 (497)
|.++|.++++|
T Consensus 324 la~~i~~ll~d 334 (376)
T 1v4v_A 324 VYRVVKGLLEN 334 (376)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999998
No 29
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.28 E-value=7.3e-10 Score=114.76 Aligned_cols=150 Identities=13% Similarity=0.051 Sum_probs=89.4
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCCC----C-EEEEEeCCCCC----CCc---c-ccccchhHHH---H-hCCCCeE
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASSQ----P-FIWVIRGGERS----QGL---E-KWIQEEGFEE---R-TTGRGFI 351 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~----~~~---~-~~~lp~~~~~---~-~~~~nv~ 351 (497)
.+++..|.+. ....+..++++++.+.. . .++.+|..... ... . .+ -+.+.+ + ...++|.
T Consensus 263 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y--~~~l~~~~~~~~l~~~V~ 338 (499)
T 2r60_A 263 PAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEI--LGKIIELIDNNDCRGKVS 338 (499)
T ss_dssp CEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHH--HHHHHHHHHHTTCBTTEE
T ss_pred cEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHH--HHHHHHHHHhcCCCceEE
Confidence 4566778764 33456667788766532 2 35555542111 000 0 00 012221 1 1257899
Q ss_pred eccccchHH---hhhcC----CccccccCC---C-chhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccc
Q 010940 352 IRGWAPQVL---LLSHR----AIGGFLTHC---G-WNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAA 420 (497)
Q Consensus 352 v~~~~pq~~---lL~~~----~~~~~I~Hg---G-~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~ 420 (497)
+.+++|+.+ ++..+ ++ +|.-. | -.++.||+++|+|+|+... ......+ +.-..|..++.
T Consensus 339 ~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~~~--- 408 (499)
T 2r60_A 339 MFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLVDP--- 408 (499)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEECT---
T ss_pred ECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEeCC---
Confidence 999998654 67777 77 65322 3 3589999999999998753 3344445 53447887765
Q ss_pred cccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 010940 421 VTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGE 464 (497)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~ 464 (497)
-+.+++.++|.++++|++....+.+++++..+
T Consensus 409 ------------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 440 (499)
T 2r60_A 409 ------------EDPEDIARGLLKAFESEETWSAYQEKGKQRVE 440 (499)
T ss_dssp ------------TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 35899999999999984333444455544433
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.26 E-value=3e-09 Score=107.75 Aligned_cols=147 Identities=18% Similarity=0.175 Sum_probs=90.0
Q ss_pred EEEEeeCCCc-C-CCHHhHHHHHHHHHhC----CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHH--
Q 010940 289 VIYACLGSIC-G-LATWQLLELGLGLEAS----SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVL-- 360 (497)
Q Consensus 289 ~V~vs~GS~~-~-~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~-- 360 (497)
.+++..|++. . -..+.+-..+..+... +.+++ .+|.+... .... + ..+.++.. .++.+.+|+|+.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~-i~G~g~~~--~~~~-l-~~~~~~~~-~~~~~~g~~~~~~~~ 325 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFI-IIGKGDPE--LEGW-A-RSLEEKHG-NVKVITEMLSREFVR 325 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEE-EECCCCHH--HHHH-H-HHHHHHCT-TEEEECSCCCHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEE-EEcCCChh--HHHH-H-HHHHhhcC-CEEEEcCCCCHHHHH
Confidence 6777888876 3 2344444444444442 23333 34433211 0000 0 11222223 5667789999864
Q ss_pred -hhhcCCccccccC----CCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCH
Q 010940 361 -LLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKR 435 (497)
Q Consensus 361 -lL~~~~~~~~I~H----gG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~ 435 (497)
++..+++ +|.- |--+++.||+++|+|+|+.. .......+ + .|.|..++. -+.
T Consensus 326 ~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~-~-~~~g~~~~~---------------~d~ 382 (439)
T 3fro_A 326 ELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-T-NETGILVKA---------------GDP 382 (439)
T ss_dssp HHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHC-C-TTTCEEECT---------------TCH
T ss_pred HHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeE-E-cCceEEeCC---------------CCH
Confidence 6777887 5532 23468999999999999864 34444444 4 468888875 358
Q ss_pred HHHHHHHHHHHc-CCchhHHHHHHHHHHHH
Q 010940 436 EKVKEAIEKLMD-RGKQGEKRRKRARQLGE 464 (497)
Q Consensus 436 ~~l~~ai~~vl~-~~~~~~~~~~~a~~~~~ 464 (497)
+++.++|.++++ |++....+.+++++..+
T Consensus 383 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 412 (439)
T 3fro_A 383 GELANAILKALELSRSDLSKFRENCKKRAM 412 (439)
T ss_dssp HHHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 999999999999 76666677777766653
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.25 E-value=4.1e-10 Score=113.23 Aligned_cols=171 Identities=14% Similarity=0.136 Sum_probs=99.2
Q ss_pred CCeEEEEeeCCCcCCCHHhHHHHHHHHHhC-----CCCEEEEEeCCCCCCCccccccchhHHHHh-CCCCeEeccccch-
Q 010940 286 PGSVIYACLGSICGLATWQLLELGLGLEAS-----SQPFIWVIRGGERSQGLEKWIQEEGFEERT-TGRGFIIRGWAPQ- 358 (497)
Q Consensus 286 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq- 358 (497)
++++++++.|...... +.+..++++++.+ +..+++..+.+.. +-+.+++.. ..+++.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~--------~~~~l~~~~~~~~~v~l~~~l~~~ 293 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNPA--------VREKAMAILGGHERIHLIEPLDAI 293 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCHH--------HHHHHHHHhCCCCCEEEeCCCCHH
Confidence 3457777765422111 1245566665432 3455555443211 112222211 2468999998863
Q ss_pred --HHhhhcCCccccccCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHH
Q 010940 359 --VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKRE 436 (497)
Q Consensus 359 --~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~ 436 (497)
..++..+++ +|+-+| |.+.||+++|+|+|++|-..+++. .+ + .|.|+.+. .+++
T Consensus 294 ~~~~l~~~ad~--vv~~SG-g~~~EA~a~g~PvV~~~~~~~~~e---~v-~-~g~~~lv~----------------~d~~ 349 (403)
T 3ot5_A 294 DFHNFLRKSYL--VFTDSG-GVQEEAPGMGVPVLVLRDTTERPE---GI-E-AGTLKLIG----------------TNKE 349 (403)
T ss_dssp HHHHHHHHEEE--EEECCH-HHHHHGGGTTCCEEECCSSCSCHH---HH-H-HTSEEECC----------------SCHH
T ss_pred HHHHHHHhcCE--EEECCc-cHHHHHHHhCCCEEEecCCCcchh---he-e-CCcEEEcC----------------CCHH
Confidence 457878887 998875 233699999999999976666654 23 5 78887664 3589
Q ss_pred HHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhhhccCCCC
Q 010940 437 KVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGSSHRNIEMLIEFVIQQTRGQEFI 497 (497)
Q Consensus 437 ~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 497 (497)
+|.++|.++++| +..+++ +++..+. ...|+++++-++.+.+.+....+..+||
T Consensus 350 ~l~~ai~~ll~~----~~~~~~---m~~~~~~-~g~~~aa~rI~~~l~~~l~~~~~~~~~~ 402 (403)
T 3ot5_A 350 NLIKEALDLLDN----KESHDK---MAQAANP-YGDGFAANRILAAIKSHFEETDRPEDFI 402 (403)
T ss_dssp HHHHHHHHHHHC----HHHHHH---HHHSCCT-TCCSCHHHHHHHHHHHHHTCCCCCCCCC
T ss_pred HHHHHHHHHHcC----HHHHHH---HHhhcCc-ccCCcHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999998 544332 3332222 2456666554444444333223556664
No 32
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.25 E-value=1.4e-09 Score=107.72 Aligned_cols=147 Identities=14% Similarity=0.148 Sum_probs=93.6
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCCC----C-EEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccch-HHhh
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASSQ----P-FIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQ-VLLL 362 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq-~~lL 362 (497)
.+++..|+... ......++++++.... . -++.+|.+.. .. +..-..+....+|+.+.++..+ ..++
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~-~~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP-RK-----FEALAEKLGVRSNVHFFSGRNDVSELM 268 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC-HH-----HHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH-HH-----HHHHHHHcCCCCcEEECCCcccHHHHH
Confidence 66777787653 3445667778776532 2 3444454321 10 1111111112478988888654 5588
Q ss_pred hcCCcccccc----CCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHH
Q 010940 363 SHRAIGGFLT----HCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKV 438 (497)
Q Consensus 363 ~~~~~~~~I~----HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l 438 (497)
..+++ +|. -|..+++.||+++|+|+|+... ..+...+ +..+.|..++.. -+.+++
T Consensus 269 ~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~--------------~~~~~l 327 (374)
T 2iw1_A 269 AAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEP--------------FSQEQL 327 (374)
T ss_dssp HHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSS--------------CCHHHH
T ss_pred HhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCC--------------CCHHHH
Confidence 88888 664 4556789999999999999754 4456666 547889888621 468999
Q ss_pred HHHHHHHHcCCchhHHHHHHHHHHHH
Q 010940 439 KEAIEKLMDRGKQGEKRRKRARQLGE 464 (497)
Q Consensus 439 ~~ai~~vl~~~~~~~~~~~~a~~~~~ 464 (497)
.++|.++++|++....+.+++++..+
T Consensus 328 ~~~i~~l~~~~~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 328 NEVLRKALTQSPLRMAWAENARHYAD 353 (374)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 99999999984444455555555544
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.19 E-value=1.4e-09 Score=108.45 Aligned_cols=129 Identities=18% Similarity=0.182 Sum_probs=82.5
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhC-----CCCEEEEEeCCCCCCCccccccchhHHHHhC-CCCeEeccccch--
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEAS-----SQPFIWVIRGGERSQGLEKWIQEEGFEERTT-GRGFIIRGWAPQ-- 358 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq-- 358 (497)
+++|+++.|...... ..+..++++++.+ +..+++..+.+.. +-+.+.+... .+++.+.+++++
T Consensus 205 ~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~~~~~ 275 (384)
T 1vgv_A 205 KKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNPN--------VREPVNRILGHVKNVILIDPQEYLP 275 (384)
T ss_dssp SEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHH--------HHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCHH--------HHHHHHHHhhcCCCEEEeCCCCHHH
Confidence 457888888765432 2345556665432 3344443332210 1122322212 368998777664
Q ss_pred -HHhhhcCCccccccCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHH
Q 010940 359 -VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 359 -~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 437 (497)
..+|..+++ ||+.+| +.+.||+++|+|+|+.+..++.. .+++ .|.|+.++. ++++
T Consensus 276 ~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~-~g~g~lv~~----------------d~~~ 331 (384)
T 1vgv_A 276 FVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVT-AGTVRLVGT----------------DKQR 331 (384)
T ss_dssp HHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHH-HTSEEEECS----------------SHHH
T ss_pred HHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhh-CCceEEeCC----------------CHHH
Confidence 457888888 888885 34889999999999998754433 2325 688887753 4789
Q ss_pred HHHHHHHHHcC
Q 010940 438 VKEAIEKLMDR 448 (497)
Q Consensus 438 l~~ai~~vl~~ 448 (497)
|.++|.++++|
T Consensus 332 la~~i~~ll~d 342 (384)
T 1vgv_A 332 IVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999998
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.16 E-value=5.1e-09 Score=105.02 Aligned_cols=129 Identities=15% Similarity=0.144 Sum_probs=80.3
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhC-----CCCEEEEEeCCCCCCCccccccchhHHHHh-CCCCeEeccccc---
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEAS-----SQPFIWVIRGGERSQGLEKWIQEEGFEERT-TGRGFIIRGWAP--- 357 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~p--- 357 (497)
+++|+++.+-...... .+..++++++.+ +..+++..+.+.. +-+.+.+.. ..+++.+.++++
T Consensus 230 ~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~--------~~~~l~~~~~~~~~v~~~~~lg~~~ 300 (396)
T 3dzc_A 230 KKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNPN--------VREPVNKLLKGVSNIVLIEPQQYLP 300 (396)
T ss_dssp SEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCHH--------HHHHHHHHTTTCTTEEEECCCCHHH
T ss_pred CCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCChH--------HHHHHHHHHcCCCCEEEeCCCCHHH
Confidence 4577777532222222 245666666443 3455554443211 112222211 246898877775
Q ss_pred hHHhhhcCCccccccCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHH
Q 010940 358 QVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 358 q~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 437 (497)
...++..+++ +|+-+| |.+.||+++|+|+|+..-..+++ ..+ + .|.++.+. .++++
T Consensus 301 ~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~---e~v-~-~G~~~lv~----------------~d~~~ 356 (396)
T 3dzc_A 301 FVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP---EAV-A-AGTVKLVG----------------TNQQQ 356 (396)
T ss_dssp HHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH---HHH-H-HTSEEECT----------------TCHHH
T ss_pred HHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch---HHH-H-cCceEEcC----------------CCHHH
Confidence 3468888888 999988 66679999999999975444443 223 5 78876543 25899
Q ss_pred HHHHHHHHHcC
Q 010940 438 VKEAIEKLMDR 448 (497)
Q Consensus 438 l~~ai~~vl~~ 448 (497)
|.++|.++++|
T Consensus 357 l~~ai~~ll~d 367 (396)
T 3dzc_A 357 ICDALSLLLTD 367 (396)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHcC
Confidence 99999999998
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.14 E-value=1.6e-09 Score=106.27 Aligned_cols=127 Identities=11% Similarity=0.027 Sum_probs=79.7
Q ss_pred EEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchH---HhhhcCC
Q 010940 290 IYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQV---LLLSHRA 366 (497)
Q Consensus 290 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~lL~~~~ 366 (497)
+++..|+.. .......++++++..+.++++. |.+..... + ..+.++.. +|+.+.+|+++. .++..++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~~~~~-----l-~~~~~~~~-~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAWEPEY-----F-DEITRRYG-STVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCCCHHH-----H-HHHHHHHT-TTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcccHHH-----H-HHHHHHhC-CCEEEeccCCHHHHHHHHHhCC
Confidence 344567765 3445666778887776665554 43322110 1 12222333 899999999976 6888888
Q ss_pred ccccccC-----------CC-chhHHHHHhhCCceeeccccccccchHHHHHHH--HcceEEeccccccccccccccccc
Q 010940 367 IGGFLTH-----------CG-WNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQV--LGIGVSVGIEAAVTWGLEDKSGLV 432 (497)
Q Consensus 367 ~~~~I~H-----------gG-~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~--~G~G~~l~~~~~~~~~~~~~~~~~ 432 (497)
+-++-++ -| -+++.||+++|+|+|+... ..+...+ +. -+.|..++.
T Consensus 234 v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~~~--------------- 293 (342)
T 2iuy_A 234 AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGTDF--------------- 293 (342)
T ss_dssp EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSSCC---------------
T ss_pred EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEcCC---------------
Confidence 8332233 33 3589999999999999864 3344444 53 235544432
Q ss_pred cCHHHHHHHHHHHHc
Q 010940 433 IKREKVKEAIEKLMD 447 (497)
Q Consensus 433 ~~~~~l~~ai~~vl~ 447 (497)
+.+++.++|.++++
T Consensus 294 -d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 294 -APDEARRTLAGLPA 307 (342)
T ss_dssp -CHHHHHHHHHTSCC
T ss_pred -CHHHHHHHHHHHHH
Confidence 57899999998885
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.11 E-value=3.7e-08 Score=98.51 Aligned_cols=330 Identities=12% Similarity=0.083 Sum_probs=168.9
Q ss_pred CcEEEEEcCCCc-cCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCC
Q 010940 9 QLHFVLIPLMSP-GHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENM 87 (497)
Q Consensus 9 ~~~il~~~~p~~-GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~ 87 (497)
++++....+|.. |.-.-...|+++|+++||+|++++...... .. ....++.+..++... .+. .
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~-------~~~~~i~~~~~~~~~----~~~----~ 78 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN-------KVYPNIYFHEVTVNQ----YSV----F 78 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC------------C
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc-------ccCCceEEEeccccc----ccc----c
Confidence 467877777754 566777899999999999999998753211 10 122266666654321 000 0
Q ss_pred CCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcc--hHHHHHHc---CCCeEEEccchHHHHHhhhhhh
Q 010940 88 DKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPW--TVNSAIKF---KIPTILFDGMGCFACCCTHKLE 162 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~--~~~~A~~l---giP~v~~~~~~~~~~~~~~~~~ 162 (497)
.. .. ..+ .....+.+++++. +||+|++...... ...++..+ ++|++..........
T Consensus 79 ~~-~~-~~~--------~~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------- 139 (394)
T 2jjm_A 79 QY-PP-YDL--------ALASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------- 139 (394)
T ss_dssp CS-CC-HHH--------HHHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-------
T ss_pred cc-cc-ccH--------HHHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-------
Confidence 00 00 000 1123355666667 9999998764322 23344433 599887554421100
Q ss_pred hccCCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHHHhhc--C
Q 010940 163 ISKVSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEYKRVK--G 240 (497)
Q Consensus 163 ~~~~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~--~ 240 (497)
.+.. . . +..+... ....++.++..+-...+ .+...+ .
T Consensus 140 ------------~~~~-----------------~-~---~~~~~~~---~~~~ad~ii~~s~~~~~-----~~~~~~~~~ 178 (394)
T 2jjm_A 140 ------------LGSD-----------------P-S---LNNLIRF---GIEQSDVVTAVSHSLIN-----ETHELVKPN 178 (394)
T ss_dssp ------------TTTC-----------------T-T---THHHHHH---HHHHSSEEEESCHHHHH-----HHHHHTCCS
T ss_pred ------------cCCC-----------------H-H---HHHHHHH---HHhhCCEEEECCHHHHH-----HHHHhhCCc
Confidence 0000 0 0 1111111 23456777766544222 222222 2
Q ss_pred CcEEEeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHHhC----C
Q 010940 241 DKVWCIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLATWQLLELGLGLEAS----S 316 (497)
Q Consensus 241 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~ 316 (497)
.++..|.... .... ......+.+.+-+.-. ++..+++..|+... ...+..++++++.+ +
T Consensus 179 ~~~~vi~ngv-~~~~-------------~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~ 241 (394)
T 2jjm_A 179 KDIQTVYNFI-DERV-------------YFKRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVD 241 (394)
T ss_dssp SCEEECCCCC-CTTT-------------CCCCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSC
T ss_pred ccEEEecCCc-cHHh-------------cCCcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCC
Confidence 4676665442 1110 0000111222222211 12245666787653 23344455554332 3
Q ss_pred CCEEEEEeCCCCCCCccccccchhHHHH---h-CCCCeEeccccch-HHhhhcCCccccc----cCCCchhHHHHHhhCC
Q 010940 317 QPFIWVIRGGERSQGLEKWIQEEGFEER---T-TGRGFIIRGWAPQ-VLLLSHRAIGGFL----THCGWNSTLEGVSAGV 387 (497)
Q Consensus 317 ~~~i~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~v~~~~pq-~~lL~~~~~~~~I----~HgG~gt~~eal~~Gv 387 (497)
.. ++.+|.+... +.+.+. . ..+++.+.++..+ ..++..+++ +| .-|..+++.||+++|+
T Consensus 242 ~~-l~i~G~g~~~---------~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~ 309 (394)
T 2jjm_A 242 AK-LLLVGDGPEF---------CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGV 309 (394)
T ss_dssp CE-EEEECCCTTH---------HHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTC
T ss_pred CE-EEEECCchHH---------HHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCC
Confidence 33 3444433221 222221 1 1367888777554 468888888 66 4455678999999999
Q ss_pred ceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q 010940 388 PLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLG 463 (497)
Q Consensus 388 P~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~ 463 (497)
|+|+.+.. .....+ +.-+.|..++. -+.+++.++|.++++|++....+.+++++..
T Consensus 310 PvI~~~~~----~~~e~v-~~~~~g~~~~~---------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 310 PCIGTRVG----GIPEVI-QHGDTGYLCEV---------------GDTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp CEEEECCT----TSTTTC-CBTTTEEEECT---------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CEEEecCC----ChHHHh-hcCCceEEeCC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99997642 233333 32457777765 3589999999999998433444455554443
No 37
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.05 E-value=1.1e-08 Score=103.19 Aligned_cols=91 Identities=10% Similarity=-0.016 Sum_probs=61.8
Q ss_pred CCCeEeccccc---h---HHhhhcCCccccccCC----CchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEec
Q 010940 347 GRGFIIRGWAP---Q---VLLLSHRAIGGFLTHC----GWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVG 416 (497)
Q Consensus 347 ~~nv~v~~~~p---q---~~lL~~~~~~~~I~Hg----G~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~ 416 (497)
.+++.+.+|++ + ..++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+ +.-+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 47899988776 3 347777887 66544 45689999999999999764 3344444 4345676664
Q ss_pred cccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHH
Q 010940 417 IEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQ 461 (497)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~ 461 (497)
+.+++.++|.++++|++....+.+++++
T Consensus 365 -----------------d~~~la~~i~~ll~~~~~~~~~~~~a~~ 392 (416)
T 2x6q_A 365 -----------------DANEAVEVVLYLLKHPEVSKEMGAKAKE 392 (416)
T ss_dssp -----------------SHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3688999999999983333334444443
No 38
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.02 E-value=3.8e-08 Score=97.53 Aligned_cols=131 Identities=12% Similarity=0.041 Sum_probs=80.1
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhC---CCCEEEEEeCCCCCCCccccccchhHHHHhC-CCCeEeccccchH---
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEAS---SQPFIWVIRGGERSQGLEKWIQEEGFEERTT-GRGFIIRGWAPQV--- 359 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq~--- 359 (497)
+++|+++.|...... ..+..++++++.+ ...+.+.++.+... . +-+.+.+... .+++.+.+++++.
T Consensus 205 ~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~~~-~-----~~~~~~~~~~~~~~v~~~g~~~~~~~~ 277 (375)
T 3beo_A 205 NRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHMNP-V-----VRETANDILGDYGRIHLIEPLDVIDFH 277 (375)
T ss_dssp SEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCSCH-H-----HHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCCCH-H-----HHHHHHHHhhccCCEEEeCCCCHHHHH
Confidence 447777887654322 3345566666432 11233333332211 0 1122222212 3689987777654
Q ss_pred HhhhcCCccccccCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHH
Q 010940 360 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVK 439 (497)
Q Consensus 360 ~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~ 439 (497)
.++..+++ +|+.+| +.+.||+++|+|+|+....... ...+ + .|.|..++. ++++|.
T Consensus 278 ~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e~v-~-~g~g~~v~~----------------d~~~la 333 (375)
T 3beo_A 278 NVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PEGI-E-AGTLKLAGT----------------DEETIF 333 (375)
T ss_dssp HHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HHHH-H-TTSEEECCS----------------CHHHHH
T ss_pred HHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ceee-c-CCceEEcCC----------------CHHHHH
Confidence 57878887 888874 5588999999999998543332 2233 5 678876642 578999
Q ss_pred HHHHHHHcC
Q 010940 440 EAIEKLMDR 448 (497)
Q Consensus 440 ~ai~~vl~~ 448 (497)
++|.++++|
T Consensus 334 ~~i~~ll~~ 342 (375)
T 3beo_A 334 SLADELLSD 342 (375)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999998
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.92 E-value=2.4e-08 Score=99.49 Aligned_cols=322 Identities=15% Similarity=0.081 Sum_probs=168.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcc-hhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTT-RFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENM 87 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~ 87 (497)
.+++++ -+++.-.+.=+-+|.++|.++ +++.++.+....+ .+.... ....+ |+.+.. .+..
T Consensus 9 ~~~~~~-v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~----~~~~~-----i~~~~~--~l~~----- 70 (385)
T 4hwg_A 9 MLKVMT-IVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF----FDDMG-----IRKPDY--FLEV----- 70 (385)
T ss_dssp CCEEEE-EECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH----HC-CC-----CCCCSE--ECCC-----
T ss_pred hhheeE-EEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH----HhhCC-----CCCCce--ecCC-----
Confidence 456655 467888888888888888887 9988887765433 121110 01111 211111 1111
Q ss_pred CCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCC--CCcchHHHHHHcCCCeEEEccchHHHHHhhhhhhhcc
Q 010940 88 DKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGK--NLPWTVNSAIKFKIPTILFDGMGCFACCCTHKLEISK 165 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~--~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 165 (497)
... .. ...+......+.+++++. +||+||+-. ...++..+|.++|||++.+...
T Consensus 71 ~~~---~~----~~~~~~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag--------------- 126 (385)
T 4hwg_A 71 AAD---NT----AKSIGLVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG--------------- 126 (385)
T ss_dssp CCC---CS----HHHHHHHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC---------------
T ss_pred CCC---CH----HHHHHHHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC---------------
Confidence 111 11 223334455677777777 999998633 3444577899999997653321
Q ss_pred CCCCcccccCCCCCcccccccccCcccCCCCCcchhHHHHHHHHHhhhccCcEEEEcchHHhhHHHHHHHHhhcC-CcEE
Q 010940 166 VSKFESFVVPGLPHRIELIKAQLPEALNPAGSHVQDLTQVRHNIRAAEQSADGIVVNTFEELEAEYVKEYKRVKG-DKVW 244 (497)
Q Consensus 166 ~~~~~~~~~pgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~-~~v~ 244 (497)
+.. +.... .....++.... -++..+..+-.. .. .+ .+...+ .+++
T Consensus 127 -----------lrs-----------~~~~~------pee~nR~~~~~--~a~~~~~~te~~-~~-~l--~~~G~~~~~I~ 172 (385)
T 4hwg_A 127 -----------NRC-----------FDQRV------PEEINRKIIDH--ISDVNITLTEHA-RR-YL--IAEGLPAELTF 172 (385)
T ss_dssp -----------CCC-----------SCTTS------THHHHHHHHHH--HCSEEEESSHHH-HH-HH--HHTTCCGGGEE
T ss_pred -----------Ccc-----------ccccC------cHHHHHHHHHh--hhceeecCCHHH-HH-HH--HHcCCCcCcEE
Confidence 000 00000 01122222111 133444333221 11 11 122232 4788
Q ss_pred EeccCcCCCccchhhhhhccCCCCCCCcCcchhcccccCCCCCeEEEEeeCCCcCCC-HHhHHHHHHHHHhC----CCCE
Q 010940 245 CIGPVSACNKLNIDKAERCRGENGSTVDDYEQCLKWLDSWEPGSVIYACLGSICGLA-TWQLLELGLGLEAS----SQPF 319 (497)
Q Consensus 245 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~ 319 (497)
++|-...+.-.... .+. ..+++.+.+.-. +++.|+++.|...... .+.+..+++++..+ +..+
T Consensus 173 vtGnp~~D~~~~~~--~~~---------~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~v 240 (385)
T 4hwg_A 173 KSGSHMPEVLDRFM--PKI---------LKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLI 240 (385)
T ss_dssp ECCCSHHHHHHHHH--HHH---------HHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEE
T ss_pred EECCchHHHHHHhh--hhc---------chhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEE
Confidence 99954332110000 000 011222223222 2448999988764432 24566677776543 4566
Q ss_pred EEEEeCCCCCCCccccccchhHHHH---h-CCCCeEeccccch---HHhhhcCCccccccCCCchhHHHHHhhCCceeec
Q 010940 320 IWVIRGGERSQGLEKWIQEEGFEER---T-TGRGFIIRGWAPQ---VLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTC 392 (497)
Q Consensus 320 i~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~v~~~~pq---~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~i 392 (497)
|+...+. +-+.+.+. . ..+|+.+.+.+++ ..++.++++ +|+-.|. .+.||.++|+|+|.+
T Consensus 241 v~p~~p~----------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~ 307 (385)
T 4hwg_A 241 IFSTHPR----------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNI 307 (385)
T ss_dssp EEEECHH----------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEEC
T ss_pred EEECChH----------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEc
Confidence 6654321 11111111 1 1357887666554 568888888 9998875 469999999999999
Q ss_pred cccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcCCchh
Q 010940 393 PLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQG 452 (497)
Q Consensus 393 P~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 452 (497)
+...+.+. .+ + .|.++.+. .++++|.+++.++++|+...
T Consensus 308 ~~~ter~e---~v-~-~G~~~lv~----------------~d~~~i~~ai~~ll~d~~~~ 346 (385)
T 4hwg_A 308 REAHERPE---GM-D-AGTLIMSG----------------FKAERVLQAVKTITEEHDNN 346 (385)
T ss_dssp SSSCSCTH---HH-H-HTCCEECC----------------SSHHHHHHHHHHHHTTCBTT
T ss_pred CCCccchh---hh-h-cCceEEcC----------------CCHHHHHHHHHHHHhChHHH
Confidence 86443222 24 5 78776653 36899999999999984433
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.73 E-value=1.5e-06 Score=93.89 Aligned_cols=150 Identities=11% Similarity=0.070 Sum_probs=84.5
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC-----CCEEEEEeCCCCCCCc-ccc-ccchhHH---HH-hCCCCeEecc---
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS-----QPFIWVIRGGERSQGL-EKW-IQEEGFE---ER-TTGRGFIIRG--- 354 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~-~~~-~lp~~~~---~~-~~~~nv~v~~--- 354 (497)
.+++..|.+.. ...+..++++++.+. .+++ .+|.+...... ... ..-+.+. ++ ...++|.+.+
T Consensus 573 ~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~Lv-IvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~ 649 (816)
T 3s28_A 573 PILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLV-VVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQM 649 (816)
T ss_dssp CEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEE-EECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCC
T ss_pred eEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEE-EEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCcc
Confidence 56677787753 344556677765543 3444 44443311000 000 0001111 11 2247888887
Q ss_pred -ccchHHhhh----cCCccccccC----CCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEecccccccccc
Q 010940 355 -WAPQVLLLS----HRAIGGFLTH----CGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGL 425 (497)
Q Consensus 355 -~~pq~~lL~----~~~~~~~I~H----gG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~ 425 (497)
++|+.++.. .+++ ||.- |--.++.||+++|+|+|+. |.......+ +.-..|+.++.
T Consensus 650 ~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~p-------- 714 (816)
T 3s28_A 650 DRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHIDP-------- 714 (816)
T ss_dssp CHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEECT--------
T ss_pred ccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeCC--------
Confidence 445555554 3455 6633 2346899999999999995 444455555 43557888776
Q ss_pred ccccccccCHHHHHHHHHHHH----cCCchhHHHHHHHHHHH
Q 010940 426 EDKSGLVIKREKVKEAIEKLM----DRGKQGEKRRKRARQLG 463 (497)
Q Consensus 426 ~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~~~~~a~~~~ 463 (497)
-+++++.++|.+++ +|++....+.+++++..
T Consensus 715 -------~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 715 -------YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp -------TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 35888999997766 77554455555555443
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.65 E-value=9.7e-06 Score=83.18 Aligned_cols=128 Identities=9% Similarity=0.059 Sum_probs=75.5
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHH---hCCCCEEEEEeCCCCCCCccccccchhHHHH--hCCCCeE-eccccchH--H
Q 010940 289 VIYACLGSICGLATWQLLELGLGLE---ASSQPFIWVIRGGERSQGLEKWIQEEGFEER--TTGRGFI-IRGWAPQV--L 360 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~nv~-v~~~~pq~--~ 360 (497)
.+++..|.+.. ...+..++++++ +.+.++++ +|.+... .-+.+++. ....++. +.++.... .
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~i-vG~g~~~-------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 361 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVV-LGAGDVA-------LEGALLAAASRHHGRVGVAIGYNEPLSHL 361 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEE-EECBCHH-------HHHHHHHHHHHTTTTEEEEESCCHHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEE-EeCCchH-------HHHHHHHHHHhCCCcEEEecCCCHHHHHH
Confidence 46677888764 223334444443 33445444 4433210 11222221 1136786 67883332 4
Q ss_pred hhhcCCccccccC----CCchhHHHHHhhCCceeeccccccccchHHHHHHHH---------cceEEecccccccccccc
Q 010940 361 LLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVL---------GIGVSVGIEAAVTWGLED 427 (497)
Q Consensus 361 lL~~~~~~~~I~H----gG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~---------G~G~~l~~~~~~~~~~~~ 427 (497)
++..+++ +|.- |--.++.||+++|+|+|+... ......+ +.- +.|..++.
T Consensus 362 ~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~---------- 424 (485)
T 1rzu_A 362 MQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP---------- 424 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS----------
T ss_pred HHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC----------
Confidence 7888888 6632 334689999999999999754 2333334 322 57777765
Q ss_pred ccccccCHHHHHHHHHHHH---cC
Q 010940 428 KSGLVIKREKVKEAIEKLM---DR 448 (497)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl---~~ 448 (497)
-+.+++.++|.+++ +|
T Consensus 425 -----~d~~~la~~i~~ll~~~~~ 443 (485)
T 1rzu_A 425 -----VTLDGLKQAIRRTVRYYHD 443 (485)
T ss_dssp -----CSHHHHHHHHHHHHHHHTC
T ss_pred -----CCHHHHHHHHHHHHHHhCC
Confidence 46899999999999 67
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.62 E-value=1.1e-05 Score=82.84 Aligned_cols=128 Identities=13% Similarity=0.053 Sum_probs=74.9
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHh---CCCCEEEEEeCCCCCCCccccccchhHHHH--hCCCCeE-eccccchH--H
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEA---SSQPFIWVIRGGERSQGLEKWIQEEGFEER--TTGRGFI-IRGWAPQV--L 360 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~nv~-v~~~~pq~--~ 360 (497)
.+++..|.+.. ...+..++++++. .+.+++++ |.+... .-+.+++. ....++. +.++..+. .
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~iv-G~g~~~-------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 362 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALL-GAGDPV-------LQEGFLAAAAEYPGQVGVQIGYHEAFSHR 362 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEE-EEECHH-------HHHHHHHHHHHSTTTEEEEESCCHHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEE-eCCchH-------HHHHHHHHHHhCCCcEEEeCCCCHHHHHH
Confidence 45566676643 3334445555543 34555444 332110 11222221 1236785 77884332 5
Q ss_pred hhhcCCccccccC----CCchhHHHHHhhCCceeeccccccccchHHHHHHHH---------cceEEecccccccccccc
Q 010940 361 LLSHRAIGGFLTH----CGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVL---------GIGVSVGIEAAVTWGLED 427 (497)
Q Consensus 361 lL~~~~~~~~I~H----gG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~---------G~G~~l~~~~~~~~~~~~ 427 (497)
++..+++ +|.- |.-.++.||+++|+|+|+... ..+...+ +.- +.|..++.
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~---------- 425 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFED---------- 425 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECS----------
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECC----------
Confidence 7888888 5532 334688999999999999754 2333344 422 57877765
Q ss_pred ccccccCHHHHHHHHHHHH---cC
Q 010940 428 KSGLVIKREKVKEAIEKLM---DR 448 (497)
Q Consensus 428 ~~~~~~~~~~l~~ai~~vl---~~ 448 (497)
-+++++.++|.+++ +|
T Consensus 426 -----~d~~~la~~i~~ll~~~~~ 444 (485)
T 2qzs_A 426 -----SNAWSLLRAIRRAFVLWSR 444 (485)
T ss_dssp -----SSHHHHHHHHHHHHHHHTS
T ss_pred -----CCHHHHHHHHHHHHHHcCC
Confidence 36899999999999 66
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.51 E-value=3.3e-05 Score=77.26 Aligned_cols=130 Identities=13% Similarity=0.070 Sum_probs=74.6
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHh-----CCCCEEEEEeCCCCCCCccccccchhHH---HHh-CCCC-------eEe
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEA-----SSQPFIWVIRGGERSQGLEKWIQEEGFE---ERT-TGRG-------FII 352 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~lp~~~~---~~~-~~~n-------v~v 352 (497)
.+++..|.... ...+..++++++. .+.+++++-.+....... +-+.+. ++. ..++ +.+
T Consensus 185 ~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~----l~~~~~~~~~~~~l~~~v~~l~~vv~~ 258 (413)
T 3oy2_A 185 VLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFD----LHSIALRELVASGVDNVFTHLNKIMIN 258 (413)
T ss_dssp EEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCC----HHHHHHHHHHHHTCSCHHHHHTTEEEE
T ss_pred eEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhh----HHHHHHHHHHHcCcccccccccceeec
Confidence 67778888653 2334445555443 245666554433221100 001111 112 2233 777
Q ss_pred ccccchHH---hhhcCCcccccc--C--CCchhHHHHHhhCCceeeccccccccchHHHHHHHHcc--------------
Q 010940 353 RGWAPQVL---LLSHRAIGGFLT--H--CGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGI-------------- 411 (497)
Q Consensus 353 ~~~~pq~~---lL~~~~~~~~I~--H--gG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~-------------- 411 (497)
.+|+|+.+ ++..+++ +|. . |...++.||+++|+|+|+... ......+ + .|.
T Consensus 259 ~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~-~~~~~~i~~~~~~~~~~ 330 (413)
T 3oy2_A 259 RTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-S-GDCVYKIKPSAWISVDD 330 (413)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-C-TTTSEEECCCEEEECTT
T ss_pred cCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-c-cCccccccccccccccc
Confidence 89998544 6777887 553 2 234589999999999998653 2333333 3 233
Q ss_pred --eE--EeccccccccccccccccccCHHHHHHHHHHHHcC
Q 010940 412 --GV--SVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 448 (497)
Q Consensus 412 --G~--~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 448 (497)
|. .+.. -+.+++.++| ++++|
T Consensus 331 ~~G~~gl~~~---------------~d~~~la~~i-~l~~~ 355 (413)
T 3oy2_A 331 RDGIGGIEGI---------------IDVDDLVEAF-TFFKD 355 (413)
T ss_dssp TCSSCCEEEE---------------CCHHHHHHHH-HHTTS
T ss_pred ccCcceeeCC---------------CCHHHHHHHH-HHhcC
Confidence 33 3433 3689999999 99998
No 44
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.49 E-value=3.2e-05 Score=76.57 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=71.5
Q ss_pred CeEeccccch-HHhhhcCCcccccc---C--CCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccc
Q 010940 349 GFIIRGWAPQ-VLLLSHRAIGGFLT---H--CGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVT 422 (497)
Q Consensus 349 nv~v~~~~pq-~~lL~~~~~~~~I~---H--gG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~ 422 (497)
++++.++..+ ..++..+++ ++. . +|..++.||+++|+|+|+-|...+.+.....+ ...|.++..
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe-------
Confidence 5666665443 457877776 443 1 23478999999999999877766666666554 225766543
Q ss_pred cccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 010940 423 WGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 469 (497)
Q Consensus 423 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a 469 (497)
-++++|.++|.++++| +....+.+++++..+.-..+
T Consensus 331 ----------~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ga 366 (374)
T 2xci_A 331 ----------KNETELVTKLTELLSV-KKEIKVEEKSREIKGCYLEK 366 (374)
T ss_dssp ----------CSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcccH
Confidence 2578999999999998 88888999998887765433
No 45
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.45 E-value=0.00037 Score=72.82 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=56.5
Q ss_pred CCeEeccccchH---HhhhcCCccccc--c-CCCchhHHHHHhhCCceeeccccccccch-HHHHHHHHcceEEeccccc
Q 010940 348 RGFIIRGWAPQV---LLLSHRAIGGFL--T-HCGWNSTLEGVSAGVPLVTCPLFAEQFYN-EKLAVQVLGIGVSVGIEAA 420 (497)
Q Consensus 348 ~nv~v~~~~pq~---~lL~~~~~~~~I--~-HgG~gt~~eal~~GvP~v~iP~~~DQ~~n-a~~~~~~~G~G~~l~~~~~ 420 (497)
++|.+.+++|+. .++..+++ || + .|+..++.||+++|+|+|+.|-..=.... +..+ ...|+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 789999999854 46777887 65 2 25567899999999999998743111222 2333 4355543221
Q ss_pred cccccccccccccCHHHHHHHHHHHHcC
Q 010940 421 VTWGLEDKSGLVIKREKVKEAIEKLMDR 448 (497)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 448 (497)
-+++++.++|.++++|
T Consensus 507 ------------~~~~~la~~i~~l~~~ 522 (568)
T 2vsy_A 507 ------------ADDAAFVAKAVALASD 522 (568)
T ss_dssp ------------SSHHHHHHHHHHHHHC
T ss_pred ------------CCHHHHHHHHHHHhcC
Confidence 2688999999999998
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.45 E-value=1.5e-06 Score=76.36 Aligned_cols=131 Identities=10% Similarity=0.035 Sum_probs=85.6
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC-CCEEEEEeCCCCCCCccccccchhHH--HHhCCCCeEeccccch---HHhh
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS-QPFIWVIRGGERSQGLEKWIQEEGFE--ERTTGRGFIIRGWAPQ---VLLL 362 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~--~~~~~~nv~v~~~~pq---~~lL 362 (497)
.+++..|++. .......++++++..+ .++++ ++.+..... +-.-.. +....+|+.+.+|+++ ..++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i-~G~~~~~~~-----l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYI-VGWFSKGDH-----AERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEE-EBCCCTTST-----HHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEE-EecCccHHH-----HHHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 3455667765 3345667788888774 45544 444333221 111122 2223579999999997 5588
Q ss_pred hcCCcccccc---CCCc-hhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHH
Q 010940 363 SHRAIGGFLT---HCGW-NSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKV 438 (497)
Q Consensus 363 ~~~~~~~~I~---HgG~-gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l 438 (497)
..+++ +|. +.|. .++.||+++|+|+|+... ..+...+ +..+.|..+ . -+.+++
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~---------------~d~~~l 152 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N---------------ADVNEI 152 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C---------------SCHHHH
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C---------------CCHHHH
Confidence 88888 554 3344 489999999999999753 3444444 435578777 3 468999
Q ss_pred HHHHHHHHcCCc
Q 010940 439 KEAIEKLMDRGK 450 (497)
Q Consensus 439 ~~ai~~vl~~~~ 450 (497)
.++|.++++|++
T Consensus 153 ~~~i~~l~~~~~ 164 (177)
T 2f9f_A 153 IDAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHhCHH
Confidence 999999998843
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.36 E-value=7.6e-05 Score=74.77 Aligned_cols=77 Identities=14% Similarity=0.005 Sum_probs=56.4
Q ss_pred CCCeEeccccchHH---hhhcCCcccccc-CCCc-hhHHHHH-------hhCCceeeccccccccchHHHHHHHHcceEE
Q 010940 347 GRGFIIRGWAPQVL---LLSHRAIGGFLT-HCGW-NSTLEGV-------SAGVPLVTCPLFAEQFYNEKLAVQVLGIGVS 414 (497)
Q Consensus 347 ~~nv~v~~~~pq~~---lL~~~~~~~~I~-HgG~-gt~~eal-------~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~ 414 (497)
.+||.+.+++|+.+ ++..+++-++-+ +-|. +++.||+ ++|+|+|+... + ..-..|..
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l 332 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRF 332 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEE
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEE
Confidence 47899999998754 677888722222 2343 5789999 99999999755 4 42445766
Q ss_pred -eccccccccccccccccccCHHHHHHHHHHHHcCC
Q 010940 415 -VGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRG 449 (497)
Q Consensus 415 -l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 449 (497)
++. -+++++.++|.++++|+
T Consensus 333 ~v~~---------------~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 333 GYTP---------------GNADSVIAAITQALEAP 353 (406)
T ss_dssp EECT---------------TCHHHHHHHHHHHHHCC
T ss_pred EeCC---------------CCHHHHHHHHHHHHhCc
Confidence 655 35899999999999983
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.04 E-value=0.00011 Score=73.73 Aligned_cols=79 Identities=20% Similarity=0.147 Sum_probs=55.5
Q ss_pred CCCeEeccccchHH---hhhcCCccccccCC---Cc-hhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEecccc
Q 010940 347 GRGFIIRGWAPQVL---LLSHRAIGGFLTHC---GW-NSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 347 ~~nv~v~~~~pq~~---lL~~~~~~~~I~Hg---G~-gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
..++.+.+++|+.+ ++..+++ ||.-+ |. .++.||+++|+|+|+ -..+ ....+ +.-..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC--
Confidence 36788999998754 6777887 55422 43 468999999999998 2221 11223 42336777765
Q ss_pred ccccccccccccccCHHHHHHHHHHHHcC
Q 010940 420 AVTWGLEDKSGLVIKREKVKEAIEKLMDR 448 (497)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 448 (497)
-+++++.++|.++++|
T Consensus 364 -------------~d~~~la~ai~~ll~~ 379 (413)
T 2x0d_A 364 -------------LNPENIAETLVELCMS 379 (413)
T ss_dssp -------------CSHHHHHHHHHHHHHH
T ss_pred -------------CCHHHHHHHHHHHHcC
Confidence 3589999999999987
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.74 E-value=0.00028 Score=60.60 Aligned_cols=141 Identities=11% Similarity=0.113 Sum_probs=83.2
Q ss_pred eEEEEeeCCCcCCCHHhHHHHHHHHHhCCC--CEEE-EEeCCCCCCCccccccchhHH---HHhCCCCeEeccccchHH-
Q 010940 288 SVIYACLGSICGLATWQLLELGLGLEASSQ--PFIW-VIRGGERSQGLEKWIQEEGFE---ERTTGRGFIIRGWAPQVL- 360 (497)
Q Consensus 288 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~--~~i~-~~~~~~~~~~~~~~~lp~~~~---~~~~~~nv~v~~~~pq~~- 360 (497)
+++++..|++.. ......++++++.+.. .+-+ .+|.+... +.+. ++.. .++.+ +|+|+.+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~---------~~~~~~~~~~~-~~v~~-g~~~~~~~ 68 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPDE---------KKIKLLAQKLG-VKAEF-GFVNSNEL 68 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTTH---------HHHHHHHHHHT-CEEEC-CCCCHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCccH---------HHHHHHHHHcC-CeEEE-eecCHHHH
Confidence 367788888753 3445667788776632 3333 33432211 2222 1222 37888 9998654
Q ss_pred --hhhcCCcccccc----CCCchhHHHHHhhCC-ceeeccccccccchHHHHHHHHcceEEecccccccccccccccccc
Q 010940 361 --LLSHRAIGGFLT----HCGWNSTLEGVSAGV-PLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVI 433 (497)
Q Consensus 361 --lL~~~~~~~~I~----HgG~gt~~eal~~Gv-P~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~ 433 (497)
++..+++ +|. -|...++.||+++|+ |+|+....+ .....+ +..+. .+.. -
T Consensus 69 ~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~-~~~~~--~~~~---------------~ 125 (166)
T 3qhp_A 69 LEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFA-LDERS--LFEP---------------N 125 (166)
T ss_dssp HHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGC-SSGGG--EECT---------------T
T ss_pred HHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhc-cCCce--EEcC---------------C
Confidence 6777887 664 233469999999996 999943211 111112 21222 2332 4
Q ss_pred CHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 010940 434 KREKVKEAIEKLMDRGKQGEKRRKRARQLGE 464 (497)
Q Consensus 434 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~ 464 (497)
+.+++.++|.++++|++....+.+++++..+
T Consensus 126 ~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 126 NAKDLSAKIDWWLENKLERERMQNEYAKSAL 156 (166)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 6899999999999985555556666665543
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.46 E-value=0.0013 Score=58.15 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=63.5
Q ss_pred CeEe-ccccchH---HhhhcCCccccccCC---C-chhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccc
Q 010940 349 GFII-RGWAPQV---LLLSHRAIGGFLTHC---G-WNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAA 420 (497)
Q Consensus 349 nv~v-~~~~pq~---~lL~~~~~~~~I~Hg---G-~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~ 420 (497)
++.+ .+++++. .++..+++ +|... | ..++.||+++|+|+|+... ..+...+ . .+.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecC---
Confidence 8999 9999854 47877887 55432 3 4688999999999988753 2333333 2 567777765
Q ss_pred cccccccccccccCHHHHHHHHHHHHc-CCchhHHHHHHHHHHH
Q 010940 421 VTWGLEDKSGLVIKREKVKEAIEKLMD-RGKQGEKRRKRARQLG 463 (497)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~~~ 463 (497)
-+.+++.++|.++++ |++....+.+++++..
T Consensus 165 ------------~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 165 ------------GDPGELANAILKALELSRSDLSKFRENCKKRA 196 (200)
T ss_dssp ------------TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 368999999999999 8444444444444433
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.42 E-value=0.0016 Score=69.88 Aligned_cols=103 Identities=16% Similarity=0.221 Sum_probs=74.8
Q ss_pred CCeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHH-HhCCCCeEeccccchHHhh--
Q 010940 286 PGSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEE-RTTGRGFIIRGWAPQVLLL-- 362 (497)
Q Consensus 286 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~-~~~~~nv~v~~~~pq~~lL-- 362 (497)
++.+||+||.+....+++.+....+.|++.+..++|....+.... .. +-..+.+ ....+.+++.+..|+.+.|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~---~~-l~~~~~~~gi~~~r~~f~~~~~~~~~l~~ 596 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE---PN-IQQYAQNMGLPQNRIIFSPVAPKEEHVRR 596 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGH---HH-HHHHHHHTTCCGGGEEEEECCCHHHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHH---HH-HHHHHHhcCCCcCeEEECCCCCHHHHHHH
Confidence 445999999998889999999999999999999999887543211 00 1111211 1234678888888865543
Q ss_pred -hcCCcccccc---CCCchhHHHHHhhCCceeeccc
Q 010940 363 -SHRAIGGFLT---HCGWNSTLEGVSAGVPLVTCPL 394 (497)
Q Consensus 363 -~~~~~~~~I~---HgG~gt~~eal~~GvP~v~iP~ 394 (497)
..+++ ++. .+|..|++|||..|||+|.++-
T Consensus 597 ~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g 630 (723)
T 4gyw_A 597 GQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPG 630 (723)
T ss_dssp GGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCC
T ss_pred hCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccC
Confidence 44554 654 7899999999999999999993
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.39 E-value=0.0011 Score=68.68 Aligned_cols=136 Identities=13% Similarity=0.055 Sum_probs=85.5
Q ss_pred eEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEE--eCCCCCCCccccccchhHHHHhCCCCeEeccccchHHh---h
Q 010940 288 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVI--RGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLL---L 362 (497)
Q Consensus 288 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~l---L 362 (497)
.++|.+|++.....++.+....+.+++.+..++|.. +...... .. +-..+...-..+.+.+.+.+|+.+. +
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~--~~--~~~~~~~~GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGIT--HP--YVERFIKSYLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGG--HH--HHHHHHHHHHGGGEEEECCCCHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhh--HH--HHHHHHHcCCCccEEEcCCCCHHHHHHHH
Confidence 589999999888889999988888888887777743 3211100 00 1111211112357888889887654 4
Q ss_pred hcCCcccccc---CCCchhHHHHHhhCCceeeccccccccchHHHHH----HHHcceEEeccccccccccccccccccCH
Q 010940 363 SHRAIGGFLT---HCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAV----QVLGIGVSVGIEAAVTWGLEDKSGLVIKR 435 (497)
Q Consensus 363 ~~~~~~~~I~---HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~----~~~G~G~~l~~~~~~~~~~~~~~~~~~~~ 435 (497)
..+++ |+. .+|..|++||+++|||+|..+- ++ .+.|+. ...|+.-.+ -. -+.
T Consensus 517 ~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G--~~--~asRvgaSlL~~~GLpE~L--IA-------------~d~ 575 (631)
T 3q3e_A 517 HNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTG--AE--VHEHIDEGLFKRLGLPEWL--IA-------------NTV 575 (631)
T ss_dssp HTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECC--SS--HHHHHHHHHHHHTTCCGGG--EE-------------SSH
T ss_pred hcCcE--EEeCCcccCChHHHHHHHcCCCEEeccC--Cc--HHHHhHHHHHHhcCCCcce--ec-------------CCH
Confidence 66776 543 3778999999999999999873 22 222221 223433110 11 357
Q ss_pred HHHHHHHHHHHcC
Q 010940 436 EKVKEAIEKLMDR 448 (497)
Q Consensus 436 ~~l~~ai~~vl~~ 448 (497)
++..+...++.+|
T Consensus 576 eeYv~~Av~La~D 588 (631)
T 3q3e_A 576 DEYVERAVRLAEN 588 (631)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCC
Confidence 7777777788888
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.33 E-value=0.011 Score=57.62 Aligned_cols=108 Identities=17% Similarity=0.133 Sum_probs=72.6
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchhhhhHhhhhhcCCCee-EEEeeCCCccCCCC
Q 010940 5 LPAHQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRFNITIKRAVESGLSIQ-LLQLEFPSVESGLP 81 (497)
Q Consensus 5 ~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-f~~i~~~~~~~~~~ 81 (497)
++.+.+||+++-....|++.=+..+.+.|+++ +.+|++++.+.+.+.++.. +.++ ++.++..
T Consensus 4 ~~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~------- 68 (349)
T 3tov_A 4 MELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK------- 68 (349)
T ss_dssp CCCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS-------
T ss_pred cCCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc-------
Confidence 34567899999999999999999999999997 9999999999777666532 2443 4444210
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCC-cEEEeCCCCcchHHHHHHcCCCeEE
Q 010940 82 QGCENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRP-SCIISGKNLPWTVNSAIKFKIPTIL 146 (497)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~p-DlvI~D~~~~~~~~~A~~lgiP~v~ 146 (497)
.. ... ...+.. +...++.. ++ |++|.-....-...++...|+|...
T Consensus 69 ----------~~--~~~----~~~~~~-l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 ----------GR--HNS----ISGLNE-VAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ----------SH--HHH----HHHHHH-HHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ----------cc--ccc----HHHHHH-HHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 00 001 111112 22233444 89 9999766555556678888998654
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.22 E-value=0.076 Score=54.82 Aligned_cols=137 Identities=11% Similarity=0.045 Sum_probs=71.3
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHh---CCCCEEEEEeCCCCCCCccccccchhHH--HHhCCCCeEeccccchH---H
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEA---SSQPFIWVIRGGERSQGLEKWIQEEGFE--ERTTGRGFIIRGWAPQV---L 360 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~lp~~~~--~~~~~~nv~v~~~~pq~---~ 360 (497)
.+++..|.+.. .+.+..++++++. .+.++++. +.+... ....++ ......++.+....++. .
T Consensus 328 p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~-G~G~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 397 (536)
T 3vue_A 328 PLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLL-GTGKKK-------FEKLLKSMEEKYPGKVRAVVKFNAPLAHL 397 (536)
T ss_dssp CEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEE-CCBCHH-------HHHHHHHHHHHSTTTEEEECSCCHHHHHH
T ss_pred cEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEE-eccCch-------HHHHHHHHHhhcCCceEEEEeccHHHHHH
Confidence 45566677653 3444556666543 34455443 332211 111121 12235678777777654 3
Q ss_pred hhhcCCccccccCC---Cc-hhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHH
Q 010940 361 LLSHRAIGGFLTHC---GW-NSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKRE 436 (497)
Q Consensus 361 lL~~~~~~~~I~Hg---G~-gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~ 436 (497)
++..+++ ||.-. |. .+++||+++|+|+|+-.. ......+ +.-.-|..........+-.+ ..+.+
T Consensus 398 ~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~l~~-----~~d~~ 465 (536)
T 3vue_A 398 IMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCKVVE-----PSDVK 465 (536)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTTCCC-----HHHHH
T ss_pred HHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCceeEEC-----CCCHH
Confidence 6777777 66432 33 488999999999998653 2333333 31223432222110000000 03467
Q ss_pred HHHHHHHHHHc
Q 010940 437 KVKEAIEKLMD 447 (497)
Q Consensus 437 ~l~~ai~~vl~ 447 (497)
+|.++|+++++
T Consensus 466 ~la~ai~ral~ 476 (536)
T 3vue_A 466 KVAATLKRAIK 476 (536)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 89999988875
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.88 E-value=0.024 Score=54.82 Aligned_cols=43 Identities=9% Similarity=0.151 Sum_probs=37.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRF 52 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~ 52 (497)
|||+++.....|++.=...+.++|+++ +.+|++++.+.+.+.+
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~ 45 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLL 45 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHH
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH
Confidence 489999999999999999999999997 9999999998655543
No 56
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.49 E-value=0.0093 Score=57.78 Aligned_cols=110 Identities=16% Similarity=0.149 Sum_probs=76.2
Q ss_pred CeEeccccchHHh---hhcCCccccccCCCc---------hhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEec
Q 010940 349 GFIIRGWAPQVLL---LSHRAIGGFLTHCGW---------NSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVG 416 (497)
Q Consensus 349 nv~v~~~~pq~~l---L~~~~~~~~I~HgG~---------gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~ 416 (497)
|+.+.+|+|+.++ |..++.+++.+-+-. +-+.|++++|+|+|+.+ ...++..+ ++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998775 444556445433322 35789999999999754 45677777 6699999874
Q ss_pred cccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHH
Q 010940 417 IEAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGSSHRNIEMLIEF 486 (497)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~~~~~~~~~~~~ 486 (497)
+.+++.++|..+.. +...+|++++++.++.++. |.-..+++.+.+.+
T Consensus 290 -----------------~~~e~~~~i~~l~~--~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -----------------DVEEAIMKVKNVNE--DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -----------------SHHHHHHHHHHCCH--HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 24678888887643 4567899999999888762 33344444444443
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.77 E-value=0.28 Score=46.80 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=39.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchhh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRFN 53 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~ 53 (497)
|||+++-....|++.=...+.++|+++ +.+|++++.+.+.+.++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 489999999999999999999999997 99999999987666544
No 58
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=88.84 E-value=7.7 Score=39.10 Aligned_cols=114 Identities=15% Similarity=0.098 Sum_probs=73.6
Q ss_pred CeEeccccchHH---hhhcCCcccccc---CCCch-hHHHHHhhC---CceeeccccccccchHHHHHHHHc-ceEEecc
Q 010940 349 GFIIRGWAPQVL---LLSHRAIGGFLT---HCGWN-STLEGVSAG---VPLVTCPLFAEQFYNEKLAVQVLG-IGVSVGI 417 (497)
Q Consensus 349 nv~v~~~~pq~~---lL~~~~~~~~I~---HgG~g-t~~eal~~G---vP~v~iP~~~DQ~~na~~~~~~~G-~G~~l~~ 417 (497)
.|.+...+|+.+ ++..+++ ||. +=|+| +..||+++| .|+|+--+ ...+.. +| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~----aGa~~~----l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSET----CGAAEV----LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETT----BTTHHH----HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCC----CCCHHH----hCCCEEEECC
Confidence 577777788744 6666887 443 45887 568999996 56555422 222322 43 4788887
Q ss_pred ccccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhhhccC
Q 010940 418 EAAVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGSSHRNIEMLIEFVIQQTRGQ 494 (497)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~~~~~~~~~~~~~~~~~~~~ 494 (497)
.+.+++.+||.++|+++. ++-+++.+++.+... ..+...=++.|++.|......+
T Consensus 423 ---------------~D~~~lA~AI~~aL~m~~--~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~~~~~ 477 (496)
T 3t5t_A 423 ---------------FDLVEQAEAISAALAAGP--RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAADHAAR 477 (496)
T ss_dssp ---------------TBHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhcccch
Confidence 468999999999998621 334445555555544 4556677888888886654443
No 59
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=87.54 E-value=1.3 Score=40.51 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=29.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
+|||++-=-+. +---+..|+++|.+.| +|+++.|...+.-+
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~ 42 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCccc
Confidence 37777655443 3445778999999998 59999988766543
No 60
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=87.32 E-value=1.4 Score=40.08 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=31.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
||||++-=-+. |---+.+|+++|++.| +|+++.|...+.-.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCC
Confidence 58888765554 5556788999999988 99999998766543
No 61
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=83.66 E-value=8.8 Score=38.63 Aligned_cols=107 Identities=17% Similarity=0.130 Sum_probs=65.7
Q ss_pred eccccchHH---hhhcCCcccccc---CCCch-hHHHHHhhCC-----ceeeccccccccchHHHHHHHHcceEEecccc
Q 010940 352 IRGWAPQVL---LLSHRAIGGFLT---HCGWN-STLEGVSAGV-----PLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 352 v~~~~pq~~---lL~~~~~~~~I~---HgG~g-t~~eal~~Gv-----P~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
+.+++++.+ ++..+++ ||. .=|+| +..||+++|+ |+|+--+.+ .+..+ .-|+.+++
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~p-- 403 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVNP-- 403 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEECT--
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEECC--
Confidence 467888765 6777887 554 34665 8999999998 666543322 12112 24677766
Q ss_pred ccccccccccccccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHhh
Q 010940 420 AVTWGLEDKSGLVIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGSSHRNIEMLIEFVIQQ 490 (497)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~~~~~~~~~~~~~~~~ 490 (497)
.+.+++.++|.++|++++ ...+++.++..+.++ + .+.+.-++.+++.+...
T Consensus 404 -------------~d~~~lA~ai~~lL~~~~--~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 -------------YDRDEVAAALDRALTMSL--AERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp -------------TCHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred -------------CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 468999999999998521 122333333333332 1 35566777788777655
No 62
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=83.54 E-value=10 Score=33.88 Aligned_cols=108 Identities=9% Similarity=0.061 Sum_probs=62.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-CCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTP-LNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
+++||+|+.+++.. .+.++.++|.+. +|+|..+.+. ......+. +...|+.+..++.. ..
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~------A~~~gIp~~~~~~~--------~~ 83 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLER------ARRAGVDALHMDPA--------AY 83 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHH------HHHTTCEEEECCGG--------GS
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHH------HHHcCCCEEEECcc--------cc
Confidence 45799999877753 366777888876 6888666543 22221111 12237887766311 00
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
... ..+...+.+.+++. +||++|+-.+. .....+-....-.++.+.++
T Consensus 84 ------~~r----------~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 84 ------PSR----------TAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ------SSH----------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ------cch----------hhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 000 12234456667777 99999976653 44455556666666765544
No 63
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=83.15 E-value=2.2 Score=44.72 Aligned_cols=43 Identities=14% Similarity=0.173 Sum_probs=30.9
Q ss_pred eEeccccch---------HHhhhcCCccccccCC---Cc-hhHHHHHhhCCceeeccc
Q 010940 350 FIIRGWAPQ---------VLLLSHRAIGGFLTHC---GW-NSTLEGVSAGVPLVTCPL 394 (497)
Q Consensus 350 v~v~~~~pq---------~~lL~~~~~~~~I~Hg---G~-gt~~eal~~GvP~v~iP~ 394 (497)
+.+-.|++. ..++..+++ ||.-+ |+ .+.+||+++|+|+|+.-.
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred EEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 444577765 457888888 66443 44 489999999999998643
No 64
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=80.80 E-value=1.8 Score=35.33 Aligned_cols=40 Identities=15% Similarity=0.084 Sum_probs=35.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
++.+|++.+.+.-+|-....-++..|..+|++|.++....
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~ 41 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLS 41 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4679999999999999999999999999999999887543
No 65
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=80.04 E-value=14 Score=32.66 Aligned_cols=106 Identities=8% Similarity=0.026 Sum_probs=59.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCC--eEEEEe-CCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGI--KVTIVT-TPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCEN 86 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH--~Vt~~~-~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~ 86 (497)
+||+|+.+++.+ -+.++.++|.+.+| +|..+. .+......+.. ...|+.+..++.. ..
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A------~~~gIp~~~~~~~--------~~-- 62 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERC------KKHNVECKVIQRK--------EF-- 62 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHH------HHHTCCEEECCGG--------GS--
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHH------HHcCCCEEEeCcc--------cc--
Confidence 489888777653 46777788888888 776554 43322221111 1126777665310 00
Q ss_pred CCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 87 MDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
.. -..+...+.+.+++. +||++|+-.+. .....+-....-.++.+.++
T Consensus 63 ----~~----------r~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 63 ----PS----------KKEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp ----SS----------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred ----cc----------hhhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 00 012223455667777 99999976643 44444555555566665544
No 66
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=79.47 E-value=2.1 Score=37.51 Aligned_cols=47 Identities=21% Similarity=-0.024 Sum_probs=37.0
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 6 PAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 6 ~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
..+.+||++--+|+.+=+.-.+.+.+.|+++|++|.++.++.-...+
T Consensus 4 ~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 4 NFAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp CCTTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CcCCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 35678999988888444437899999999999999999988554433
No 67
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=79.29 E-value=5.7 Score=39.18 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=54.6
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 5 LPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 5 ~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
|..+.+||++++.+.... .+.+++++.|++|+++.+.......... .--.+..++..
T Consensus 1 M~~~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~~~~~~~~~~--------~~d~~~~~~~~---------- 57 (425)
T 3vot_A 1 MTKRNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNSAEDFPGNLP--------AVERCVPLPLF---------- 57 (425)
T ss_dssp -CCCCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEETTSCCCCSCT--------TEEEEEEECTT----------
T ss_pred CCCCCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECCCcccccCHh--------hccEEEecCCC----------
Confidence 345678999987654322 3567788889999998755332110000 01123333200
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCC--CCcchHHHHHHcCCCe
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGK--NLPWTVNSAIKFKIPT 144 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~--~~~~~~~~A~~lgiP~ 144 (497)
... +.+.+.+.++.++. ++|.|++-. ....+..+++.+|+|.
T Consensus 58 ---------~d~-------~~~~~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 58 ---------EDE-------EAAMDVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ---------TCH-------HHHHHHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ---------CCH-------HHHHHHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 001 11223455666676 999998543 3344556789999993
No 68
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=79.24 E-value=8.7 Score=36.49 Aligned_cols=105 Identities=8% Similarity=0.016 Sum_probs=56.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCc----chhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNT----TRFNITIKRAVESGLSIQLLQLEFPSVESGLPQG 83 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~----~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~ 83 (497)
.+|||+|+. --+....+.++|.++||+|..+.+.+.+ ..+... +...++.+...+ .+..
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~-----A~~~gIpv~~~~------~~~~- 83 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLE-----AEKDGVPVFKYS------RWRA- 83 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHH-----HHHHTCCEEECS------CCEE-
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHH-----HHHcCCCEEecC------cccc-
Confidence 458999982 2244445779999999998776542211 111110 112266665552 1000
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 84 CENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
. ......+.+.+++. +||++|+=.+. .....+-......++.+.++
T Consensus 84 ----~---------------~~~~~~~~~~l~~~--~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 84 ----K---------------GQALPDVVAKYQAL--GAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp ----T---------------TEECHHHHHHHHTT--CCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred ----c---------------ccccHHHHHHHHhc--CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 0 01112344556677 99999976653 33444555555667766654
No 69
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=75.69 E-value=1.9 Score=38.48 Aligned_cols=156 Identities=11% Similarity=0.035 Sum_probs=75.4
Q ss_pred cccCCCCCeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchH
Q 010940 280 WLDSWEPGSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQV 359 (497)
Q Consensus 280 ~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~ 359 (497)
|++-. .+.++.|..|.++ ...++.|.+.+..+.++... +.+.+.......++.....--+.
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----------~~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----------VSAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----------CCHHHHHHHHTTSCEEECSCCCG
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----------CCHHHHHHHHcCCcEEEECCCCH
Confidence 44443 3448888877554 44566777778888776542 11233222223344332222223
Q ss_pred HhhhcCCccccccCCCchhHHHHHhhCCceeeccc-cccccchHHHH----HHHHcceEEeccccccccccccccccccC
Q 010940 360 LLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPL-FAEQFYNEKLA----VQVLGIGVSVGIEAAVTWGLEDKSGLVIK 434 (497)
Q Consensus 360 ~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~-~~DQ~~na~~~----~~~~G~G~~l~~~~~~~~~~~~~~~~~~~ 434 (497)
..|..+++ +|.--|.-.+.+.++.-.- ..+|. ..|.+..+..+ .++-++=+.+.. +|+++. -
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST---------~G~sP~-l 153 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAIST---------DGASPL-L 153 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEEC---------TTSCHH-H
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEEC---------CCCCcH-H
Confidence 44555665 7777776555544443222 33332 24554443211 021122222221 221111 1
Q ss_pred HHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 010940 435 REKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 469 (497)
Q Consensus 435 ~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a 469 (497)
...|++.|.+.+ +.....+-+.+.++++.+++.
T Consensus 154 a~~iR~~ie~~l--p~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 154 TKRIKEDLSSNY--DESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHS--CTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHH
Confidence 245666666666 344567788888888888765
No 70
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=74.35 E-value=3.7 Score=36.22 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=37.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhh
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNIT 55 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (497)
++++||++...++.+-+. ...|.+.|+++| +|.++.++.-...+...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 346899999999998776 899999999999 99999998665555433
No 71
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=73.71 E-value=31 Score=32.45 Aligned_cols=36 Identities=14% Similarity=0.023 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|++|||+|+-.|. ..+...++|.++||+|..+.+..
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCC
Confidence 4689999987763 33456688888999998776643
No 72
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=73.45 E-value=16 Score=34.68 Aligned_cols=41 Identities=17% Similarity=0.162 Sum_probs=34.8
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeCCCCc
Q 010940 9 QLHFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIVTTPLNT 49 (497)
Q Consensus 9 ~~~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (497)
.++|+|++. |+.|=..-...||..|+++|++|.++......
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 456766655 89999999999999999999999999988544
No 73
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=72.68 E-value=10 Score=33.53 Aligned_cols=109 Identities=13% Similarity=0.153 Sum_probs=61.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCC-CCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAE-HGIKVTIVTTP-LNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~-rGH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
.+++||+++.++..+.+.-++ ++..+ .+++|..+.+. ......+.. ...|+.+..++.. .
T Consensus 3 ~~~~riavl~SG~Gsnl~all---~~~~~~~~~eI~~Vis~~~~a~~~~~A------~~~gIp~~~~~~~--------~- 64 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQAII---GAIQKGLAIEIRAVISNRADAYGLKRA------QQADIPTHIIPHE--------E- 64 (215)
T ss_dssp -CCEEEEEEESSCCHHHHHHH---HHHHTTCSEEEEEEEESCTTCHHHHHH------HHTTCCEEECCGG--------G-
T ss_pred CCCcEEEEEEeCCcHHHHHHH---HHHHcCCCCEEEEEEeCCcchHHHHHH------HHcCCCEEEeCcc--------c-
Confidence 458899999888766555444 44443 36888877653 222211111 2227887776411 0
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
.+.. ......+.+.+++. +||++|+-.+. .....+-....-.++.+.++
T Consensus 65 -----~~~r----------~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 65 -----FPSR----------TDFESTLQKTIDHY--DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -----SSSH----------HHHHHHHHHHHHTT--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----cCch----------hHhHHHHHHHHHhc--CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0000 01134566777777 99999976643 44445556666666765544
No 74
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=72.67 E-value=38 Score=29.32 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=33.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+-.|.+++..+.|=..-.+.+|-....+|++|.|+..-
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~ 65 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFI 65 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEee
Confidence 45788888888999999999999999999999999644
No 75
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=72.49 E-value=9.9 Score=33.43 Aligned_cols=109 Identities=9% Similarity=0.043 Sum_probs=60.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-CCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTP-LNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQG 83 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~ 83 (497)
|.++||+++.+++.+. +.+|.+++.+. .++|..+.+. ......+.. ...|+.+..++.. .
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A------~~~gIp~~~~~~~--------~ 67 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKA------EAAGIATQVFKRK--------D 67 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHH------HHTTCCEEECCGG--------G
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHH------HHcCCCEEEeCcc--------c
Confidence 6688999988887655 44555666554 3688877653 222221111 2227777776411 0
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 84 CENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
... -..+...+.+.+++. +||++|+-.+. .....+-....-.++.+.++
T Consensus 68 ------~~~----------r~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 68 ------FAS----------KEAHEDAILAALDVL--KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp ------SSS----------HHHHHHHHHHHHHHH--CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred ------cCC----------HHHHHHHHHHHHHhc--CCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 000 011224566667777 99999976643 44455555566566665543
No 76
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=72.23 E-value=37 Score=29.79 Aligned_cols=106 Identities=8% Similarity=0.008 Sum_probs=60.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCC-CcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPL-NTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCEN 86 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~-~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~ 86 (497)
+||+++.++..+ -+.+|.+.+.+. +|+|..+.+.. .....+.. ...|+.+..++.. ..
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A------~~~gIp~~~~~~~--------~~-- 61 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERA------RQAGIATHTLIAS--------AF-- 61 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHH------HHTTCEEEECCGG--------GC--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHH------HHcCCcEEEeCcc--------cc--
Confidence 478888777665 366777777765 68887665443 22211111 2237887766310 00
Q ss_pred CCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 87 MDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
.. -..+...+.+.+++. +||++|+-.+. .....+-......++.+.++
T Consensus 62 ----~~----------r~~~~~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 62 ----DS----------REAYDRELIHEIDMY--APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ----SS----------HHHHHHHHHHHHGGG--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----cc----------hhhccHHHHHHHHhc--CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 00 012234466777788 99999976653 44445556666667765544
No 77
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=72.10 E-value=37 Score=29.78 Aligned_cols=106 Identities=5% Similarity=-0.019 Sum_probs=60.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-CCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTP-LNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCEN 86 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~ 86 (497)
+||+++.+++.+ -+.++.++|.+. +|+|..+.+. ......+.. ...|+.+..++.. ..
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A------~~~gIp~~~~~~~--------~~-- 64 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERA------ARENVPAFVFSPK--------DY-- 64 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHH------HHTTCCEEECCGG--------GS--
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHH------HHcCCCEEEeCcc--------cc--
Confidence 578887777654 356677788877 7898776544 222222211 2227777665311 00
Q ss_pred CCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 87 MDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
.. -..+...+.+.+++. +||++|+-.+. .....+-....-.++.+.++
T Consensus 65 ----~~----------~~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 65 ----PS----------KAAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ----SS----------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ----cc----------hhhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 00 012233455667777 99999976643 44445556666666765544
No 78
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=71.88 E-value=1.7 Score=37.94 Aligned_cols=48 Identities=6% Similarity=-0.071 Sum_probs=38.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhh
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNIT 55 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (497)
++++||++...++.|=+. ...|.+.|+++|++|.++.++.-...+...
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 53 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPAH 53 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCHH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 346789998888888775 789999999999999999988655544433
No 79
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=71.62 E-value=3.9 Score=35.99 Aligned_cols=42 Identities=12% Similarity=-0.083 Sum_probs=32.6
Q ss_pred CCCcEEEEEcCCCccCHHH-HHHHHHHHHHCCCeEEEEeCCCCc
Q 010940 7 AHQLHFVLIPLMSPGHLIP-MIDMARLLAEHGIKVTIVTTPLNT 49 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P-~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (497)
.+.+||++.-+|+ +..+- .+.+.+.|+++|++|.++.++.-.
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4567898888887 44554 899999999999999999988544
No 80
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=71.18 E-value=3.8 Score=34.50 Aligned_cols=42 Identities=17% Similarity=0.164 Sum_probs=37.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCc
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNT 49 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (497)
++.+|++.+.+.-.|-....-++..|..+|++|.++....-.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~ 58 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTP 58 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 478999999999999999999999999999999998755433
No 81
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=70.94 E-value=3.8 Score=36.13 Aligned_cols=44 Identities=9% Similarity=0.042 Sum_probs=36.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhh
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFN 53 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (497)
++||++--+|+.|-+. ...|.+.|+++|++|.++.++.-...+.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 4689998889888777 8999999999999999999885554444
No 82
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=69.50 E-value=32 Score=31.07 Aligned_cols=125 Identities=9% Similarity=0.094 Sum_probs=65.6
Q ss_pred CcEEEEEc-C-CCccCHHHHHHHHHHHHHCCCeEEEEeC---CC--CcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCC
Q 010940 9 QLHFVLIP-L-MSPGHLIPMIDMARLLAEHGIKVTIVTT---PL--NTTRFNITIKRAVESGLSIQLLQLEFPSVESGLP 81 (497)
Q Consensus 9 ~~~il~~~-~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~~---~~--~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~ 81 (497)
+++.+|++ . ...|=..-.+.|++.|+++|++|.++=+ .. .......... .. +.......+.+ .
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~--~~-g~~~~~~~~~~-------~ 94 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGR--LA-GVTQLAGLARY-------P 94 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHH--HH-CCCEEEEEEEC-------S
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHH--Hc-CCCCCCCCeeE-------C
Confidence 44544444 4 4668889999999999999999999742 11 0011111110 01 10111111111 0
Q ss_pred CCCCCCCCCCChhHHHHHHHHH-HHhhHHHHHHHhhcCCCCcEEEeCCCC----------cchHHHHHHcCCCeEEEccc
Q 010940 82 QGCENMDKLPSRDLIKNFFHAA-SMLKQPFEQLFDKLHPRPSCIISGKNL----------PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~~~pDlvI~D~~~----------~~~~~~A~~lgiP~v~~~~~ 150 (497)
.. .. +. ........ ....+.+.+.+++...+.|+||.|..- .....+|+.++.|++.+...
T Consensus 95 ~p------~s-P~-~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~ 166 (251)
T 3fgn_A 95 QP------MA-PA-AAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTA 166 (251)
T ss_dssp SS------SC-HH-HHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECS
T ss_pred CC------CC-hH-HHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcC
Confidence 00 00 11 10000000 112244666666655689999988731 23456899999999998765
Q ss_pred h
Q 010940 151 G 151 (497)
Q Consensus 151 ~ 151 (497)
.
T Consensus 167 ~ 167 (251)
T 3fgn_A 167 D 167 (251)
T ss_dssp S
T ss_pred C
Confidence 3
No 83
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=68.94 E-value=5.7 Score=33.88 Aligned_cols=45 Identities=9% Similarity=-0.046 Sum_probs=37.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNIT 55 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (497)
+||++.-.++.|=+. .+.+.+.|+++|++|.++.++.-.+.+...
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~ 50 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFINGE 50 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCHH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhHH
Confidence 589888888877765 899999999999999999998766655543
No 84
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.24 E-value=27 Score=34.77 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=27.8
Q ss_pred HHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEc
Q 010940 110 FEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFD 148 (497)
Q Consensus 110 l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~ 148 (497)
+++++++. +||++|.+.. ...+|+++|||++.+.
T Consensus 367 le~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 367 LEHAARAG--QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HHHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 66777777 9999999864 5679999999999744
No 85
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=67.63 E-value=37 Score=32.20 Aligned_cols=101 Identities=10% Similarity=0.140 Sum_probs=60.9
Q ss_pred CcEEEEEcCCCcc----CHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 9 QLHFVLIPLMSPG----HLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 9 ~~~il~~~~p~~G----Hi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
+.-|++.|..+.. -..-+..|++.|.++|++|.+++.+...+.++..... ..-....+
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~-----~~~~~~~l------------- 246 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQ-----METKPIVA------------- 246 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHT-----CSSCCEEC-------------
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHh-----cccccEEe-------------
Confidence 3456676665433 1456899999999999999987776555544433210 00000001
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~ 150 (497)
... ....++..+++ ..|++|+.. ++...+|..+|+|+|.++..
T Consensus 247 ---~g~--------------~sl~e~~ali~----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 247 ---TGK--------------FQLGPLAAAMN----RCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp ---TTC--------------CCHHHHHHHHH----TCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred ---eCC--------------CCHHHHHHHHH----hCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 000 01123444555 669999754 57777899999999998754
No 86
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=67.39 E-value=4.8 Score=35.39 Aligned_cols=49 Identities=18% Similarity=0.183 Sum_probs=37.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCCCCcchhhhh
Q 010940 6 PAHQLHFVLIPLMSPGHLIPMIDMARLLAE-HGIKVTIVTTPLNTTRFNIT 55 (497)
Q Consensus 6 ~~~~~~il~~~~p~~GHi~P~l~LA~~L~~-rGH~Vt~~~~~~~~~~~~~~ 55 (497)
.++++||++...++.+=+. ...|.+.|++ +|++|.++.++.-...+...
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 16 MERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp CCSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred ccCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 3567899999999888655 5999999999 89999999998665555433
No 87
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=67.28 E-value=30 Score=29.39 Aligned_cols=46 Identities=15% Similarity=0.022 Sum_probs=29.8
Q ss_pred eEeccccchHH-hhhcCCccccccCCCchhHHH---HHhhCCceeecccc
Q 010940 350 FIIRGWAPQVL-LLSHRAIGGFLTHCGWNSTLE---GVSAGVPLVTCPLF 395 (497)
Q Consensus 350 v~v~~~~pq~~-lL~~~~~~~~I~HgG~gt~~e---al~~GvP~v~iP~~ 395 (497)
.++++..+... ++..-+-.+++--||.||..| ++.+++|++++|.+
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 34455555433 333333335777899997655 47799999999983
No 88
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=66.42 E-value=25 Score=30.05 Aligned_cols=39 Identities=18% Similarity=0.295 Sum_probs=31.1
Q ss_pred EEEEEc--CCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCc
Q 010940 11 HFVLIP--LMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNT 49 (497)
Q Consensus 11 ~il~~~--~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (497)
+++.+. -++.|=..-...||..|+++|++|.++-.....
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~ 42 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQM 42 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 444443 378899999999999999999999999766443
No 89
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=65.80 E-value=5.3 Score=32.93 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 3568988743 5554 78899999999999999864
No 90
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=65.74 E-value=38 Score=31.82 Aligned_cols=38 Identities=21% Similarity=0.210 Sum_probs=28.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCc
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNT 49 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (497)
+++|||+|+-+|..+ +...++|.++||+|..+.+....
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~ 39 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPDR 39 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCCc
Confidence 567899998888654 34567888899999887765433
No 91
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=64.60 E-value=28 Score=30.69 Aligned_cols=109 Identities=11% Similarity=0.077 Sum_probs=59.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAE-HGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCE 85 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~ 85 (497)
+.++||+++.+++.+.+..++ +++.+ .+++|..+.+.......+.. ...|+.+..++.. .
T Consensus 10 ~~~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~a~~~~~A------~~~gIp~~~~~~~--------~-- 70 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRECRAAEIA------AEASVPVFTVRLA--------D-- 70 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSCCHHHHHH------HHTTCCEEECCGG--------G--
T ss_pred CCCcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCchHHHHHH------HHcCCCEEEeCcc--------c--
Confidence 457899999888766544444 44433 34688777655433222222 2227777666310 0
Q ss_pred CCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 86 NMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
... . ..+...+.+.+++. +||++|+-.+. .....+-....-.++.+.++
T Consensus 71 ----~~~---r-------~~~d~~~~~~l~~~--~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 71 ----HPS---R-------DAWDVAITAATAAH--EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp ----SSS---H-------HHHHHHHHHHHHTT--CCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred ----ccc---h-------hhhhHHHHHHHHhh--CCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 000 0 11234566777777 99999865533 34444555555556665543
No 92
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=63.78 E-value=5.7 Score=36.79 Aligned_cols=33 Identities=21% Similarity=0.357 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|||++ .|+.|.+- -.|++.|.++||+|+.++-.
T Consensus 1 MkILV--TGatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLV--GGGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEE--ECCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 57777 46667665 45789999999999999743
No 93
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=63.43 E-value=8.5 Score=33.78 Aligned_cols=45 Identities=20% Similarity=0.129 Sum_probs=38.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
++.+|++.+.++-.|-....-++..|..+|++|.++...--.+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 356999999999999999999999999999999999875444433
No 94
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=63.22 E-value=28 Score=30.64 Aligned_cols=103 Identities=6% Similarity=0.042 Sum_probs=59.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-CCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTP-LNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~-~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
+++||+++.+++.+. +.+|.+++.+. +++|..+.+. ......+.. ...|+.+..++.. ..
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A------~~~gIp~~~~~~~--------~~ 69 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIA------QSYGIPTFVVKRK--------PL 69 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHH------HHTTCCEEECCBT--------TB
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHH------HHcCCCEEEeCcc--------cC
Confidence 467998888877554 44555666554 3788877653 222222111 2227777766410 00
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
. ...+.+.+++. +||++|+-.+. .....+-....-.++.+.++
T Consensus 70 ------~---------------~~~~~~~L~~~--~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 70 ------D---------------IEHISTVLREH--DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ------C---------------HHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------C---------------hHHHHHHHHHh--CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 0 04566677777 99999976653 44445556666666765544
No 95
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=62.42 E-value=5.5 Score=34.70 Aligned_cols=44 Identities=11% Similarity=0.229 Sum_probs=36.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCCCCcchhhh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEH-GIKVTIVTTPLNTTRFNI 54 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~r-GH~Vt~~~~~~~~~~~~~ 54 (497)
+||++--+++.|-+. ...|.+.|+++ |++|.++.++.-...+..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHH
Confidence 478888888887766 89999999999 999999998865555543
No 96
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=62.14 E-value=11 Score=34.45 Aligned_cols=43 Identities=16% Similarity=0.016 Sum_probs=37.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTT 50 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (497)
++.+|++.+.++-.|-....-++..|.++|++|.+++..--.+
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e 164 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAE 164 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4679999999999999999999999999999999987543333
No 97
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=60.60 E-value=4.9 Score=38.26 Aligned_cols=41 Identities=22% Similarity=0.174 Sum_probs=29.3
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCC-eEEEEeCC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGI-KVTIVTTP 46 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH-~Vt~~~~~ 46 (497)
|+++|..+++||.++-.+..|.. ||..|+..|| +|+++-..
T Consensus 1 ~~~~~~~~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 1 MAPALVQRRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp --CCCCSCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSS
T ss_pred CCcCcCCCCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECC
Confidence 78887667789999865544433 8899999999 98777544
No 98
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=60.55 E-value=43 Score=31.36 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
++|||+|+.++.. .....++|.+.||+|..+.+..
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~p 36 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQP 36 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeCC
Confidence 3689999887643 3455677888899998776543
No 99
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=59.65 E-value=74 Score=27.52 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=30.1
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 5 LPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 5 ~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|+..+++++++|. +..|.-..--..|+++|++|.-+++..
T Consensus 21 mp~~~Lr~avVCa---SN~NRSMEAH~~L~k~Gf~V~SfGTGs 60 (214)
T 4h3k_B 21 MPSSPLRVAVVSS---SNQNRSMEAHNILSKRGFSVRSFGTGT 60 (214)
T ss_dssp -----CEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCCCCeEEEECC---CCcchhHHHHHHHHHCCCceEeecCCC
Confidence 3446799999885 677888888899999999999988763
No 100
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=59.22 E-value=49 Score=33.15 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=26.3
Q ss_pred HHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEE
Q 010940 109 PFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILF 147 (497)
Q Consensus 109 ~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 147 (497)
.+++++++. +||++|... ....+|+++|||++.+
T Consensus 392 el~~~i~~~--~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 392 VLLKTVDEY--QADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHT--TCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHhc--CCCEEEECC---chhHHHHHcCCCEEEe
Confidence 355666667 999999975 4567899999998753
No 101
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=59.15 E-value=59 Score=32.88 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
.+|++++ |.-.-.++|++.|.+-|.+|..+....
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~~ 397 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCHN 397 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeCC
Confidence 4678886 344556788888888999988876553
No 102
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=58.77 E-value=44 Score=29.91 Aligned_cols=22 Identities=5% Similarity=0.161 Sum_probs=16.4
Q ss_pred HhhHHHHHHHhhcCCCCcEEEeCC
Q 010940 105 MLKQPFEQLFDKLHPRPSCIISGK 128 (497)
Q Consensus 105 ~~~~~l~~ll~~~~~~pDlvI~D~ 128 (497)
.....+.+++++. +||+|++-.
T Consensus 84 ~~~~~l~~~ir~~--~PdvV~t~~ 105 (242)
T 2ixd_A 84 EYIREIVKVIRTY--KPKLVFAPY 105 (242)
T ss_dssp HHHHHHHHHHHHH--CCSEEEEEC
T ss_pred HHHHHHHHHHHHc--CCCEEEECC
Confidence 3456677788888 999999753
No 103
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=58.34 E-value=18 Score=32.62 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=30.2
Q ss_pred CcEEEEEcCCCcc-----------CHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPG-----------HLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~G-----------Hi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++||+++.....+ ...=++.--..|+++|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689888776422 3667888889999999999999975
No 104
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=58.27 E-value=39 Score=32.61 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|+.++|+++..+.. .+.+++++++.|++|.++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 45679999877754 467999999999999999754
No 105
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=58.07 E-value=56 Score=33.01 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=25.7
Q ss_pred HHHHHhhcCCCCcEEEeCCCCcchHHHHHHc-------CCCeEEE
Q 010940 110 FEQLFDKLHPRPSCIISGKNLPWTVNSAIKF-------KIPTILF 147 (497)
Q Consensus 110 l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~l-------giP~v~~ 147 (497)
+++++++. +||++|.+. ....+|+++ |||++.+
T Consensus 426 l~~~i~~~--~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 426 FRSLMFTR--QPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHH--CCSEEEECG---GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHhhc--CCCEEEECc---chHHHHHHhhcccccCCCCeEEe
Confidence 45566666 999999986 347788888 9999874
No 106
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=57.36 E-value=40 Score=32.13 Aligned_cols=41 Identities=15% Similarity=0.171 Sum_probs=35.0
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHH--HCCCeEEEEeCCCC
Q 010940 8 HQLHFVLIPL-MSPGHLIPMIDMARLLA--EHGIKVTIVTTPLN 48 (497)
Q Consensus 8 ~~~~il~~~~-p~~GHi~P~l~LA~~L~--~rGH~Vt~~~~~~~ 48 (497)
++++|++++. ++.|=..-...||..|+ ++|++|.++.....
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 4567777665 89999999999999999 89999999998854
No 107
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=56.55 E-value=54 Score=28.64 Aligned_cols=107 Identities=7% Similarity=-0.013 Sum_probs=57.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGCENM 87 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~~ 87 (497)
+||+++.++..+.+.. |.+.+.+. +|+|..+.+.......... +...|+.+..++.. .
T Consensus 1 ~riaVl~SG~Gs~L~a---Li~~~~~~~~~~~I~~Vvs~~~~~~~~~~-----A~~~gIp~~~~~~~--------~---- 60 (209)
T 1meo_A 1 ARVAVLISGTGSNLQA---LIDSTREPNSSAQIDIVISNKAAVAGLDK-----AERAGIPTRVINHK--------L---- 60 (209)
T ss_dssp CEEEEEESSSCTTHHH---HHHHHHSTTCSCEEEEEEESSTTCHHHHH-----HHHTTCCEEECCGG--------G----
T ss_pred CeEEEEEECCchHHHH---HHHHHhcCCCCcEEEEEEeCCCChHHHHH-----HHHcCCCEEEECcc--------c----
Confidence 3788888877765544 44555554 7998877644322211111 12226777665311 0
Q ss_pred CCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 88 DKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
.... ..+...+.+.+++. +||++|+-.+. .....+-....-.++.+.++
T Consensus 61 --~~~r----------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 61 --YKNR----------VEFDSAIDLVLEEF--SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp --SSSH----------HHHHHHHHHHHHHT--TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --cCch----------hhhhHHHHHHHHhc--CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 0000 11223455667777 99999865543 34444555566666665544
No 108
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=54.89 E-value=1.1e+02 Score=27.46 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=25.1
Q ss_pred CCCCcEEE-eCCCC-cchHHHHHHcCCCeEEEccch
Q 010940 118 HPRPSCII-SGKNL-PWTVNSAIKFKIPTILFDGMG 151 (497)
Q Consensus 118 ~~~pDlvI-~D~~~-~~~~~~A~~lgiP~v~~~~~~ 151 (497)
...||+|| .|+.. .-+..=|.++|||+|.++-+.
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 35899987 56543 345556999999999987764
No 109
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=54.68 E-value=91 Score=25.82 Aligned_cols=140 Identities=11% Similarity=0.106 Sum_probs=73.8
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCcc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIG 368 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~ 368 (497)
.|-|-+||.. +....++....|+.++..+-+.+-+-++ +|+.+. +|+.+.. ..-..+
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--------~p~~~~-----------~~~~~a~--~~~~~~ 60 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK--------TAEHVV-----------SMLKEYE--ALDRPK 60 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHH-----------HHHHHHH--TSCSCE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC--------CHHHHH-----------HHHHHhh--hcCCCc
Confidence 5666677765 5666777888888998876666555444 454332 1111111 101234
Q ss_pred ccccCCCch----hHHHHHhhCCceeeccccc-cccchH-HHHHHHH--cceEEeccccccccccccccccccCHHHHHH
Q 010940 369 GFLTHCGWN----STLEGVSAGVPLVTCPLFA-EQFYNE-KLAVQVL--GIGVSVGIEAAVTWGLEDKSGLVIKREKVKE 440 (497)
Q Consensus 369 ~~I~HgG~g----t~~eal~~GvP~v~iP~~~-DQ~~na-~~~~~~~--G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 440 (497)
++|.=.|.. ++.-+ ..-+|+|.+|... +-.... .-+++ . |+.+.--.+. .+..-+..
T Consensus 61 ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dLlS~vq-mp~GvpVatv~~~-------------~nAa~lA~ 125 (159)
T 3rg8_A 61 LYITIAGRSNALSGFVDG-FVKGATIACPPPSDSFAGADIYSSLR-MPSGISPALVLEP-------------KNAALLAA 125 (159)
T ss_dssp EEEEECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTHHHHHHC-CCTTCCCEECCSH-------------HHHHHHHH
T ss_pred EEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCccHHHHHh-CCCCCceEEecCc-------------hHHHHHHH
Confidence 477766643 33333 4668999999642 211111 11112 2 4443221111 44444444
Q ss_pred HHHHHHcCCchhHHHHHHHHHHHHHHHHHhc
Q 010940 441 AIEKLMDRGKQGEKRRKRARQLGEIANRAIG 471 (497)
Q Consensus 441 ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~ 471 (497)
.|.. +.| +.++++.+.+++.+++.+.
T Consensus 126 ~Il~-~~d----~~l~~kl~~~r~~~~~~v~ 151 (159)
T 3rg8_A 126 RIFS-LYD----KEIADSVKSYMESNAQKII 151 (159)
T ss_dssp HHHT-TTC----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHh-CCC----HHHHHHHHHHHHHHHHHHH
Confidence 4432 345 8888888888888775543
No 110
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=54.47 E-value=11 Score=32.39 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=35.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhh
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNIT 55 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~ 55 (497)
||++.-.++.+=+ =...+.+.|+++|++|.++.++.-...+...
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCGG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 6888888887766 6789999999999999999988655554433
No 111
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=54.36 E-value=15 Score=26.20 Aligned_cols=50 Identities=18% Similarity=0.206 Sum_probs=32.3
Q ss_pred hhCCceeeccccccccchHHHHHHH--HcceEEeccccccccccccccccccCHHHHHHHHHHHHc
Q 010940 384 SAGVPLVTCPLFAEQFYNEKLAVQV--LGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMD 447 (497)
Q Consensus 384 ~~GvP~v~iP~~~DQ~~na~~~~~~--~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 447 (497)
-+|+|+|++--.+-|.+....--+. -|+...+-+. .++++|...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlks--------------tdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKS--------------TDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEEC--------------CCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhcc--------------CCHHHHHHHHHHHHH
Confidence 3689999887767665543322122 3555444332 689999999998885
No 112
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=53.92 E-value=50 Score=33.54 Aligned_cols=35 Identities=17% Similarity=0.200 Sum_probs=28.4
Q ss_pred HHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEE
Q 010940 108 QPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILF 147 (497)
Q Consensus 108 ~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 147 (497)
..+++++++. +||++|... ....+|+++|||++.+
T Consensus 446 ~el~~~i~~~--~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKL--KPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHH--CCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHhc--CCCEEEccc---chhHHHHhcCCCEEEe
Confidence 4577888888 999999875 3567899999999863
No 113
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=53.87 E-value=18 Score=31.82 Aligned_cols=45 Identities=9% Similarity=0.001 Sum_probs=38.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
++.+|++.+.+.-.|-....-++..|..+|++|.+++..--.+.+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 468999999999999999999999999999999999876444444
No 114
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=53.81 E-value=96 Score=25.84 Aligned_cols=145 Identities=14% Similarity=0.106 Sum_probs=76.7
Q ss_pred eEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 288 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 288 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
|.|-|-+||.. +.+..++....|+.++..+-+.+-+-++ .|+.+. +|+.. +....+
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR--------tp~~l~-----------~~~~~---~~~~g~ 61 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAHR--------TPDKMF-----------DYAET---AKERGL 61 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHH-----------HHHHH---TTTTTC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCcC--------CHHHHH-----------HHHHH---HHhCCC
Confidence 35667777765 5666777888899998876665555444 444332 11111 111123
Q ss_pred cccccCCCch----hHHHHHhhCCceeeccccccc-cchHHHH--HH-HHcceEEe-ccccccccccccccccccCHHHH
Q 010940 368 GGFLTHCGWN----STLEGVSAGVPLVTCPLFAEQ-FYNEKLA--VQ-VLGIGVSV-GIEAAVTWGLEDKSGLVIKREKV 438 (497)
Q Consensus 368 ~~~I~HgG~g----t~~eal~~GvP~v~iP~~~DQ-~~na~~~--~~-~~G~G~~l-~~~~~~~~~~~~~~~~~~~~~~l 438 (497)
+++|.=.|.. ++.-+ ..-+|+|.+|...-. ......+ ++ =.|+++.. .... .+ .++..-+
T Consensus 62 ~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~------ag----~~nAa~l 130 (166)
T 3oow_A 62 KVIIAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGM------AG----AKNAALF 130 (166)
T ss_dssp CEEEEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTH------HH----HHHHHHH
T ss_pred cEEEEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCC------cc----chHHHHH
Confidence 4477766643 33333 346899999984321 1222221 12 02333322 1110 00 0334444
Q ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 439 KEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 439 ~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
...|.. +.| +.++++.+.+++.+++.+.+
T Consensus 131 Aa~Il~-~~d----~~l~~kl~~~r~~~~~~v~~ 159 (166)
T 3oow_A 131 AASILQ-HTD----INIAKALAEFRAEQTRFVLE 159 (166)
T ss_dssp HHHHHG-GGC----HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHc-CCC----HHHHHHHHHHHHHHHHHHHh
Confidence 443432 345 89999999999998876554
No 115
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=53.59 E-value=13 Score=32.08 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=36.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNI 54 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 54 (497)
+||++..+++.|-+ =...+.++|+++|++|.++.++.-...+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 48999889998855 579999999999999999998865555443
No 116
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=53.09 E-value=17 Score=29.69 Aligned_cols=40 Identities=15% Similarity=0.090 Sum_probs=31.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTT 50 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (497)
-..++..+..-.+.+.+.+|...++.|++|+++.+-.-..
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~ 49 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQ 49 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHH
Confidence 3455555678889999999999999999999998764443
No 117
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=52.26 E-value=45 Score=32.10 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=30.5
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+|++++. ++.|-..-...||..|+++|++|.++..
T Consensus 3 ~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 3 LILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp EEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 5666555 7889999999999999999999999987
No 118
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=51.77 E-value=17 Score=33.09 Aligned_cols=43 Identities=19% Similarity=0.082 Sum_probs=33.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
++||||++-=-+. |---+.+|+++|++ +|+|+++.|...+.-.
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 5699999776555 55667888999987 8999999998776543
No 119
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=51.30 E-value=21 Score=32.09 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=28.8
Q ss_pred cEEEEEcCCCcc-----------CHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPG-----------HLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~G-----------Hi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+||+++.+...+ ...=++.....|+++|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 488888776432 3356778888999999999999976
No 120
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=50.36 E-value=9.7 Score=35.02 Aligned_cols=27 Identities=7% Similarity=0.046 Sum_probs=23.1
Q ss_pred cccccCCCchhHHHHHhh------CCceeeccc
Q 010940 368 GGFLTHCGWNSTLEGVSA------GVPLVTCPL 394 (497)
Q Consensus 368 ~~~I~HgG~gt~~eal~~------GvP~v~iP~ 394 (497)
+++|.=||-||+.+++.. ++|++.+|.
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 449999999999999765 889999875
No 121
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=50.19 E-value=23 Score=31.55 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=35.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+++|++..-|+.|=..-++.+|..|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 688999999999999999999999999999999887665
No 122
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=49.98 E-value=20 Score=35.79 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=60.6
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGL 80 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~ 80 (497)
|+.-..+.+++-+|++. ++-.-++.+|+.|.+.|.++. ++......++.. |+.+..+.. ..++
T Consensus 1 ~~~~~~~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~---vTgf 63 (523)
T 3zzm_A 1 MSTDDGRRPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQ---LTGF 63 (523)
T ss_dssp ---CCCCCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHH---HHSC
T ss_pred CCcccccccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccc---cCCC
Confidence 33333445566566655 466678999999999998875 555555555444 666655421 1255
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHH
Q 010940 81 PQGCENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSA 137 (497)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A 137 (497)
|+-+.-.- .......+.-+..-+.....+.++-+....+.|+||++.+ ++--.++
T Consensus 64 PEil~GRV-KTLHP~ihgGiLa~r~~~~h~~~l~~~~i~~iDlVvvNLY-PF~~tv~ 118 (523)
T 3zzm_A 64 PEVLDGRV-KTLHPRVHAGLLADLRKSEHAAALEQLGIEAFELVVVNLY-PFSQTVE 118 (523)
T ss_dssp CCCTTTTS-SSCSHHHHHHHHCCTTSHHHHHHHHHHTCCCCSEEEEECC-CHHHHHH
T ss_pred chhhCCcc-ccCCchhhhhhccCCCCHHHHHHHHHCCCCceeEEEEeCC-ChHHHHh
Confidence 55432111 1111111111111122333455554444468999999864 4444443
No 123
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=49.97 E-value=61 Score=30.34 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
+|||+|+-.|..+ +...++|.++||+|..+.+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCC
Confidence 4699999888665 3456888899999988776443
No 124
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=49.63 E-value=1.2e+02 Score=25.84 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=33.0
Q ss_pred CCCC-CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 3 SPLP-AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 3 ~~~~-~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|.|+ ..++++++++. +..|....--..|+++|++|.-+++..
T Consensus 2 ~~m~~~~~l~~avVCa---SN~NRSMEaH~~L~k~G~~V~SfGTGs 44 (198)
T 3p9y_A 2 SHMTDPSKLAVAVVDS---SNMNRSMEAHNFLAKKGFNVRSYGTGE 44 (198)
T ss_dssp CSCCCTTCCEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CcCCCCCCceEEEEcC---CCCcccHHHHHHHHhCCCceeecCCCc
Confidence 3444 56899999986 456777788888999999999888763
No 125
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=49.53 E-value=19 Score=32.90 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+++|+++ |+ |.+ -..|++.|.++||+|+.+.-.
T Consensus 3 ~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIA--GC-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4578876 35 744 457899999999999999744
No 126
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=49.50 E-value=20 Score=33.46 Aligned_cols=46 Identities=13% Similarity=0.009 Sum_probs=31.1
Q ss_pred CCCCCCCCCcEEEEEcCCCcc-C---HHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 1 MASPLPAHQLHFVLIPLMSPG-H---LIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~G-H---i~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|++.....++||+++..+..+ | +.....++++|.+.||+|..+.+.
T Consensus 5 ~~~~~~~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 5 MSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp ---CCGGGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cCccchhhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 444332336789888875433 2 346788999999999999998743
No 127
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=48.81 E-value=26 Score=32.29 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=24.5
Q ss_pred CCCCcEEEEEc-CCCccCHHHHH--HHHHHHHHCCCeEEEEe
Q 010940 6 PAHQLHFVLIP-LMSPGHLIPMI--DMARLLAEHGIKVTIVT 44 (497)
Q Consensus 6 ~~~~~~il~~~-~p~~GHi~P~l--~LA~~L~~rGH~Vt~~~ 44 (497)
.|.+||||++- .|-..-++-.+ ...+.|.++||+|+++-
T Consensus 19 ~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 19 YFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp ---CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 45677886654 45544444433 46778888999999874
No 128
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=47.99 E-value=96 Score=30.43 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=34.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCCCCcchh
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAE-HGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~-rGH~Vt~~~~~~~~~~~ 52 (497)
=+++...|+.|=..-.+.+|...+. .|..|.|++.+...+.+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 3577778999999999999999887 48999999998765543
No 129
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=47.92 E-value=49 Score=32.68 Aligned_cols=43 Identities=16% Similarity=0.307 Sum_probs=37.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcch
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTR 51 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~ 51 (497)
+..|+++..++.|=..-...||..|+++|++|.++..+.+...
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~a 142 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG 142 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchh
Confidence 4566777778999999999999999999999999998877653
No 130
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=47.68 E-value=34 Score=30.49 Aligned_cols=41 Identities=29% Similarity=0.195 Sum_probs=27.2
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|..+|.++.+ +++++.++. - --..+|+.|.++|++|.+..-
T Consensus 1 M~~~~~l~gk-~~lVTGas~-g--IG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 1 MSQFMNLEGK-VALVTGASR-G--IGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp -CCTTCCTTC-EEEESSCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CccccCCCCC-EEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 6666555444 555555443 2 356899999999999988764
No 131
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=47.35 E-value=41 Score=33.26 Aligned_cols=43 Identities=9% Similarity=0.072 Sum_probs=36.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhh
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFN 53 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (497)
=+++...|+.|=..-.+.+|...+.+|..|.|++.+...+.+.
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHHH
Confidence 3677778999999999999999999999999999987665443
No 132
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=47.00 E-value=41 Score=28.54 Aligned_cols=46 Identities=7% Similarity=0.039 Sum_probs=32.2
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|.....|+++||+|+.++... ..-+....+.|.+.|++|+++++..
T Consensus 1 m~~~~~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 1 MTKAKDLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp -----CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCCCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 444444667899999886554 4556677888999999999999764
No 133
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=46.79 E-value=35 Score=27.29 Aligned_cols=42 Identities=7% Similarity=-0.013 Sum_probs=30.9
Q ss_pred CcEEEEEcC-C--CccCHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Q 010940 9 QLHFVLIPL-M--SPGHLIPMIDMARLLAEHGIKVTIVTTPLNTT 50 (497)
Q Consensus 9 ~~~il~~~~-p--~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (497)
..|++|+.. + ........+.+|...++.||+|+++....-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 345654444 4 46678889999999999999999988764443
No 134
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=46.74 E-value=14 Score=33.10 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
.+|||.|+-.+..|- +||+.|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 478999999999885 689999999999998765
No 135
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=45.90 E-value=68 Score=31.79 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=27.5
Q ss_pred HHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEc
Q 010940 110 FEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFD 148 (497)
Q Consensus 110 l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~ 148 (497)
+++++++. +||++|.+. ....+|+++|||++.+.
T Consensus 377 l~~~i~~~--~pDl~ig~~---~~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 377 VHQWIKNE--GVDLLISNT---YGKFIAREENIPFVRFG 410 (458)
T ss_dssp HHHHHHHS--CCSEEEESG---GGHHHHHHHTCCEEECS
T ss_pred HHHHHHhc--CCCEEEeCc---chHHHHHHcCCCEEEee
Confidence 56677777 999999886 35778999999999853
No 136
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=45.81 E-value=1.3e+02 Score=27.89 Aligned_cols=105 Identities=12% Similarity=0.070 Sum_probs=57.5
Q ss_pred CcEEEEEcCCCccC-----HHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCC
Q 010940 9 QLHFVLIPLMSPGH-----LIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQG 83 (497)
Q Consensus 9 ~~~il~~~~p~~GH-----i~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~ 83 (497)
+.-|++.|....+- ..-+..+++.|.++|++|.++..+...+..+........ ........+
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~-~~~~~~~~l------------ 246 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNT-EQQAWCRNL------------ 246 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCH-HHHTTEEEC------------
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhh-ccccceEec------------
Confidence 34566665442221 347889999999999999887766443333222100000 000001111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccc
Q 010940 84 CENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~ 150 (497)
... ....++..+++ .-|++|+.. ++...+|..+|+|+|.++..
T Consensus 247 ----~g~--------------~sl~e~~ali~----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 247 ----AGE--------------TQLDQAVILIA----ACKAIVTND--SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp ----TTT--------------SCHHHHHHHHH----TSSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred ----cCc--------------CCHHHHHHHHH----hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 000 01123445655 669999754 56677899999999997754
No 137
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=45.71 E-value=81 Score=29.31 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=22.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|||+|+.+|. ......++|.++||+|..+.+..
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcCC
Confidence 4788876532 23555778888899998776543
No 138
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=45.37 E-value=24 Score=35.01 Aligned_cols=40 Identities=28% Similarity=0.305 Sum_probs=29.3
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|..+|..+..||+|+-.+..| +++|+.|+++||+|+..=.
T Consensus 1 m~~~~~~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 1 MKTITTFENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp ---CCTTTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CcchhhcCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 555555567899998886654 4579999999999999754
No 139
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=45.28 E-value=14 Score=34.43 Aligned_cols=37 Identities=22% Similarity=0.162 Sum_probs=28.4
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 5 LPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 5 ~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|.++.++|+|+-.+..|+ .||..|+++||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 344456899998887776 5889999999999987643
No 140
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=45.21 E-value=28 Score=32.17 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=27.0
Q ss_pred CCCCCCCCCcEEEEEcCCCc-cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 1 MASPLPAHQLHFVLIPLMSP-GHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~-GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|..++.++.+. ++++..+. +-+ -..+|+.|+++|++|.++.-.
T Consensus 22 m~~~~~l~~k~-vlVTGasg~~GI--G~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 22 MRTGMLMEGKK-GVIIGVANDKSL--AWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CCCCCTTTTCE-EEEECCCSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred ccchhccCCCE-EEEEeCCCCCCH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44444444444 44444432 123 467999999999999887644
No 141
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=45.00 E-value=13 Score=30.53 Aligned_cols=45 Identities=18% Similarity=0.199 Sum_probs=33.2
Q ss_pred CcEEEEEcC-C-CccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhh
Q 010940 9 QLHFVLIPL-M-SPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFN 53 (497)
Q Consensus 9 ~~~il~~~~-p-~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (497)
.|+++++-. | ..-.+.-.+-++..|+++||+|++++++.-...++
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 466665533 4 45666678899999999999999999995544443
No 142
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=44.69 E-value=12 Score=35.47 Aligned_cols=33 Identities=12% Similarity=0.113 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+||+|+-.++.| ..+|..|.++||+|+++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 4589999888777 46789999999999999853
No 143
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=42.81 E-value=1.5e+02 Score=24.93 Aligned_cols=145 Identities=14% Similarity=0.118 Sum_probs=75.9
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCC
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRA 366 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 366 (497)
.|.|-|-+||.. +....++....|+.++..+-+.+-+-++ +|+.+. +|+-.. ..-.
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--------~p~~l~-----------~~~~~a---~~~g 67 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR--------MPDEMF-----------DYAEKA---RERG 67 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHH-----------HHHHHH---TTTT
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc--------CHHHHH-----------HHHHHH---HhcC
Confidence 456777888776 5667778888999999887666655554 554332 111110 1112
Q ss_pred ccccccCCCc----hhHHHHHhhCCceeeccccccccc--hH-HHHHH-HHcceEEecc-ccccccccccccccccCHHH
Q 010940 367 IGGFLTHCGW----NSTLEGVSAGVPLVTCPLFAEQFY--NE-KLAVQ-VLGIGVSVGI-EAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 367 ~~~~I~HgG~----gt~~eal~~GvP~v~iP~~~DQ~~--na-~~~~~-~~G~G~~l~~-~~~~~~~~~~~~~~~~~~~~ 437 (497)
++++|.=.|. .++.- -.--+|+|.+|....-.. .+ .-+++ =.|+.+..-. +. .+ ..+..-
T Consensus 68 ~~ViIa~AG~aahLpgvvA-~~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~------~~----a~NAal 136 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLA-AKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGE------AG----AANAAL 136 (173)
T ss_dssp CSEEEEEEESSCCHHHHHH-HHCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSH------HH----HHHHHH
T ss_pred CeEEEEeccccccchhhhe-ecCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCC------cc----hHHHHH
Confidence 2336655443 24443 355799999997543211 11 11112 0133322111 00 00 023333
Q ss_pred HHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhc
Q 010940 438 VKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIG 471 (497)
Q Consensus 438 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~ 471 (497)
+...|- -+.| +.++++.++++++.++.+.
T Consensus 137 lA~~IL-a~~d----~~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 137 FAVSIL-SGNS----VDYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHH-TTSC----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-cCCC----HHHHHHHHHHHHHHHHHHH
Confidence 433332 2445 8899999999998876643
No 144
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=42.74 E-value=14 Score=35.43 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=29.6
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 5 LPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 5 ~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|++.++||.|+-.+..|. .+|..|+++||+|++....
T Consensus 25 m~~~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred ccccCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 345578999999888874 6899999999999998754
No 145
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=42.29 E-value=99 Score=27.08 Aligned_cols=44 Identities=5% Similarity=-0.130 Sum_probs=29.8
Q ss_pred eEeccccchHH--hhhcCCccccccCCCchhHHHHH---------hhCCceeeccc
Q 010940 350 FIIRGWAPQVL--LLSHRAIGGFLTHCGWNSTLEGV---------SAGVPLVTCPL 394 (497)
Q Consensus 350 v~v~~~~pq~~--lL~~~~~~~~I~HgG~gt~~eal---------~~GvP~v~iP~ 394 (497)
+.+...++... ++..++. +++--||.||.-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 44445555433 3344554 678899999988776 57999999863
No 146
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=42.16 E-value=25 Score=33.09 Aligned_cols=35 Identities=20% Similarity=0.182 Sum_probs=28.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++.+||.|+-.+..| +-.+|+.|+++||+|+..=.
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 556799999998887 34699999999999998754
No 147
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=41.07 E-value=29 Score=32.50 Aligned_cols=32 Identities=25% Similarity=0.300 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
+.++|.|+-.+..| ..+|+.|+++||+|++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~d 61 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWN 61 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEc
Confidence 45799999888777 678999999999999875
No 148
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=40.84 E-value=1.6e+02 Score=24.69 Aligned_cols=144 Identities=15% Similarity=0.102 Sum_probs=76.6
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCcc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIG 368 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~ 368 (497)
.|-|-+||.. +.+..++....|+.++..+-+.+-+-++ +|+.+.+ |+.. .....++
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~SaHR--------~p~~~~~-----------~~~~---a~~~g~~ 69 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSAHR--------TPDRLFS-----------FAEQ---AEANGLH 69 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHHH-----------HHHH---TTTTTCS
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC--------CHHHHHH-----------HHHH---HHhCCCc
Confidence 4666677765 5666778888899999887666655554 5543321 1100 0111223
Q ss_pred ccccCCCch----hHHHHHhhCCceeeccccc-cccchHHHHH--H-HHcceEEe-ccccccccccccccccccCHHHHH
Q 010940 369 GFLTHCGWN----STLEGVSAGVPLVTCPLFA-EQFYNEKLAV--Q-VLGIGVSV-GIEAAVTWGLEDKSGLVIKREKVK 439 (497)
Q Consensus 369 ~~I~HgG~g----t~~eal~~GvP~v~iP~~~-DQ~~na~~~~--~-~~G~G~~l-~~~~~~~~~~~~~~~~~~~~~~l~ 439 (497)
++|.=.|.. ++.-+ ..-+|+|.+|... +-......+. + -.|+.+.. ...+ .+ .++..-+.
T Consensus 70 ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~------a~----~~nAa~lA 138 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGK------AG----AANAALLA 138 (174)
T ss_dssp EEEEEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSH------HH----HHHHHHHH
T ss_pred EEEEECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCC------cc----chHHHHHH
Confidence 377666643 33333 3468999999753 2222232221 2 02432111 1110 00 03344444
Q ss_pred HHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 440 EAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 440 ~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
..|.. +.| +.++++.+.+++.+++.+.+
T Consensus 139 a~ILa-~~d----~~l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 139 AQILA-LHD----TELAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp HHHHH-TTC----HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHc-CCC----HHHHHHHHHHHHHHHHHHHh
Confidence 44432 445 89999999999998876554
No 149
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.84 E-value=26 Score=27.64 Aligned_cols=33 Identities=15% Similarity=0.389 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+||+++-. |.+- ..+|+.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 468988733 6554 46789999999999998753
No 150
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=40.57 E-value=25 Score=30.38 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|||++ .++.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 MkvlV--tGatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGI--IGATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEE--EcCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 36666 45556554 57899999999999998744
No 151
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=40.53 E-value=17 Score=29.03 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+||+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 457888754 443 467999999999999998753
No 152
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=40.26 E-value=53 Score=29.37 Aligned_cols=41 Identities=15% Similarity=-0.007 Sum_probs=26.9
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|...|.++.+++++ +.. .|- --..+|++|.++|++|.++.-
T Consensus 1 m~~~~~l~~k~vlV-TGa-s~g--iG~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 1 MAGRWNLEGCTALV-TGG-SRG--IGYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp -CCTTCCTTCEEEE-ESC-SSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCccCCCCCEEEE-ECC-CcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 66655555555554 433 333 346889999999999998764
No 153
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=40.12 E-value=47 Score=29.57 Aligned_cols=26 Identities=31% Similarity=0.383 Sum_probs=21.0
Q ss_pred ccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 20 PGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 20 ~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
.|.+ -.+||++|.++|++|+++..+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 5544 4678999999999999998763
No 154
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=39.97 E-value=22 Score=29.38 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
..+++++..++. +.|++++++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 357888776663 999999999999999999998 5443
No 155
>3c5t_B Exendin-4, exenatide; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} SCOP: j.6.1.1 PDB: 3c59_B*
Probab=39.78 E-value=25 Score=20.35 Aligned_cols=20 Identities=10% Similarity=0.250 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHhhhccCCC
Q 010940 477 HRNIEMLIEFVIQQTRGQEF 496 (497)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~ 496 (497)
+.++.+||++|+..++-+.|
T Consensus 8 ~~aakdFv~WL~ngk~~~~~ 27 (31)
T 3c5t_B 8 EEAVRLFIEWLKNGGPSSGA 27 (31)
T ss_dssp HHHHHHHHHHHHTTGGGC--
T ss_pred HHHHHHHHHHHHhCCCCCCC
Confidence 45788999999988766554
No 156
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=39.66 E-value=75 Score=29.50 Aligned_cols=107 Identities=9% Similarity=0.116 Sum_probs=59.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
.+++||+++.++. || -+.+|..+-.+. +.+|..+.+.. +.+... +...|+.+..+|.. ..
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~--~~~~~~-----A~~~gIp~~~~~~~------~~-- 164 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNH--QDLRSM-----VEWHDIPYYHVPVD------PK-- 164 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESS--STTHHH-----HHTTTCCEEECCCC------SS--
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECc--HHHHHH-----HHHcCCCEEEcCCC------cC--
Confidence 3578999988877 44 455666555443 46888776432 111111 23338888877521 00
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
.. ......+.+++++. +||+||.-.+. .....+.....-.++.+.++
T Consensus 165 -------~r----------~~~~~~~~~~l~~~--~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 -------DK----------EPAFAEVSRLVGHH--QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -------CC----------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -------CH----------HHHHHHHHHHHHHh--CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 00 01123466677777 99999976543 34444555555566665543
No 157
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=39.61 E-value=16 Score=36.97 Aligned_cols=37 Identities=8% Similarity=0.134 Sum_probs=30.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
.+|+||+|+-.+..| +.+|+.|.++|++||++.+..+
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCCC
Confidence 357899999877655 6789999999999999987643
No 158
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.26 E-value=1.3e+02 Score=25.71 Aligned_cols=39 Identities=15% Similarity=0.070 Sum_probs=29.2
Q ss_pred HHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEccchHH
Q 010940 109 PFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDGMGCF 153 (497)
Q Consensus 109 ~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 153 (497)
.++++.++ +.|+||.+. ....+|+++|+|.+.+.+....
T Consensus 134 ~i~~l~~~---G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 134 LISKVKTE---NIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp HHHHHHHT---TCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHC---CCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 44455443 999999986 4478999999999998774443
No 159
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=39.23 E-value=18 Score=33.87 Aligned_cols=38 Identities=11% Similarity=-0.063 Sum_probs=28.7
Q ss_pred cE-EEEEcCCCccCHH--------------HHHHHHHHHHHCCCeEEEEeCCC
Q 010940 10 LH-FVLIPLMSPGHLI--------------PMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 10 ~~-il~~~~p~~GHi~--------------P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
.| |+++..|+.=.+. --.+||+++.++|++|+++..+.
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 45 7777777755541 45688999999999999998653
No 160
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=38.90 E-value=20 Score=34.48 Aligned_cols=30 Identities=40% Similarity=0.445 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
|||+|+-.+-.| +.+|..|+++||+|+++=
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 589998777555 889999999999999983
No 161
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=38.66 E-value=37 Score=31.63 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+||+++-.++.|- .+|..|.++||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 4799998888884 57899999999999998654
No 162
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=38.64 E-value=28 Score=32.48 Aligned_cols=33 Identities=3% Similarity=0.109 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+|+|+++..+ ....++++|+++||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 4689998876 56789999999999999887653
No 163
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=38.10 E-value=40 Score=30.74 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+-++++++.++.| --.++|+.|+++|++|.++.-
T Consensus 28 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 28 ARPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 3456666665543 457899999999999998873
No 164
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=38.02 E-value=22 Score=33.70 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++||+++-.+..| ..+|..|.++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 345799999776666 3478899999999998853
No 165
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=37.90 E-value=57 Score=24.89 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+++||+++|..+.|--.-.-.+=+.+.++|.++.+-...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 356899999987766666668888888999988765433
No 166
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=37.73 E-value=56 Score=29.09 Aligned_cols=38 Identities=11% Similarity=0.092 Sum_probs=29.3
Q ss_pred cEEEEEcCCCc-----------cCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 10 LHFVLIPLMSP-----------GHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 10 ~~il~~~~p~~-----------GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+||+|+..... -...=+....+.|.++|++|+++++..
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 47888877532 245677888889999999999999764
No 167
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=37.71 E-value=29 Score=30.06 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|||++ .++.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 MkilV--tGatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAV--LGATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEE--EcCCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 36666 45566554 67899999999999998743
No 168
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=37.70 E-value=34 Score=29.01 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++|+++ ++.|.+ -..|+++|.++||+|+.+.-.
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 577764 555544 467899999999999998743
No 169
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=37.70 E-value=2.1e+02 Score=26.42 Aligned_cols=112 Identities=11% Similarity=0.003 Sum_probs=60.0
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC-CCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS-QPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
+.+|.+|.+. ..++.++...+ ..++.++..+.. ..+.+.++...+ ..+-..+++|..+++
T Consensus 8 igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~~--------~~~~~~~~~~~~----~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 8 YGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRRLE--------NAQKMAKELAIP----VAYGSYEELCKDETI 68 (330)
T ss_dssp EEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSSSH--------HHHHHHHHTTCC----CCBSSHHHHHHCTTC
T ss_pred EEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCCHH--------HHHHHHHHcCCC----ceeCCHHHHhcCCCC
Confidence 7788888876 34566776653 344444433211 112222222111 124456778875555
Q ss_pred cccccCCCc----hhHHHHHhhCCceeec-cccc--cccchHHHHHHHHcceEEecccc
Q 010940 368 GGFLTHCGW----NSTLEGVSAGVPLVTC-PLFA--EQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 368 ~~~I~HgG~----gt~~eal~~GvP~v~i-P~~~--DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
.+++--.-. --+.+|+.+|+++++= |+.. ++-.-...++++.|+-+.+....
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~ 127 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKS 127 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSG
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhh
Confidence 445543333 3467889999998862 5433 34333333446678777666543
No 170
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=37.67 E-value=37 Score=32.12 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=26.8
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHH--CCCeEEEEeCC
Q 010940 6 PAHQLHFVLIPLMSPGHLIPMIDMARLLAE--HGIKVTIVTTP 46 (497)
Q Consensus 6 ~~~~~~il~~~~p~~GHi~P~l~LA~~L~~--rGH~Vt~~~~~ 46 (497)
.++.++|+++ |+.|-+- ..|++.|.+ +||+|+.+.-.
T Consensus 7 ~~~~~~vlVT--GatG~IG--~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 7 ELENQTILIT--GGAGFVG--SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCTTCEEEEE--TTTSHHH--HHHHHHHHHHCTTSEEEEEECC
T ss_pred hcCCCEEEEE--CCCCHHH--HHHHHHHHhhCCCCeEEEEECC
Confidence 4556788774 4555443 478899999 99999998743
No 171
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=37.44 E-value=1.8e+02 Score=24.35 Aligned_cols=142 Identities=13% Similarity=0.108 Sum_probs=77.3
Q ss_pred eEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 288 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 288 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
+.|-|-+||.. +....++....|+.++..+=+.+-+-++ +|+.+. +|+-... -...+
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR--------~p~~~~-----------~~~~~a~-~~g~~- 64 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHR--------TPEAMF-----------SYARGAA-ARGLE- 64 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHH-----------HHHHHHH-HHTCC-
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCC--------CHHHHH-----------HHHHHHH-hCCCC-
Confidence 35666677765 5666778888899999887666655544 454332 1111110 01233
Q ss_pred cccccCCCch----hHHHHHhhCCceeecccccccc-chHHHH--HH-HHcceEEe-cc-ccccccccccccccccCHHH
Q 010940 368 GGFLTHCGWN----STLEGVSAGVPLVTCPLFAEQF-YNEKLA--VQ-VLGIGVSV-GI-EAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 368 ~~~I~HgG~g----t~~eal~~GvP~v~iP~~~DQ~-~na~~~--~~-~~G~G~~l-~~-~~~~~~~~~~~~~~~~~~~~ 437 (497)
++|.=.|.. ++.-+ ..-+|+|.+|...-.. .....+ ++ =.|+.+.. .. +. .+..-
T Consensus 65 -ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~-------------~nAa~ 129 (174)
T 3lp6_A 65 -VIIAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGA-------------GNAGL 129 (174)
T ss_dssp -EEEEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCH-------------HHHHH
T ss_pred -EEEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcc-------------hHHHH
Confidence 377666642 34433 4679999999753211 122222 12 12322221 11 11 44444
Q ss_pred HHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 438 VKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 438 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
+...|.. +.| +.++++.+.+++.+++.+.+
T Consensus 130 lAa~Il~-~~d----~~l~~kl~~~r~~~~~~v~~ 159 (174)
T 3lp6_A 130 LAVRMLG-AAN----PQLRARIVAFQDRLADVVAA 159 (174)
T ss_dssp HHHHHHH-TTC----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-CCC----HHHHHHHHHHHHHHHHHHHH
Confidence 5544433 345 88999999999988877554
No 172
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.39 E-value=46 Score=29.48 Aligned_cols=67 Identities=10% Similarity=0.099 Sum_probs=44.4
Q ss_pred ccccccCCCchhHHHHHhhCCceeeccccc-c----------------------ccchHHHHHHHHcceEEecccccccc
Q 010940 367 IGGFLTHCGWNSTLEGVSAGVPLVTCPLFA-E----------------------QFYNEKLAVQVLGIGVSVGIEAAVTW 423 (497)
Q Consensus 367 ~~~~I~HgG~gt~~eal~~GvP~v~iP~~~-D----------------------Q~~na~~~~~~~G~G~~l~~~~~~~~ 423 (497)
++++|+.||........ -++|+|-++..+ | ....+..+.+-+|+-+.....
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~----- 137 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSY----- 137 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEE-----
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEe-----
Confidence 34599999998888875 579999999742 2 222334454555555544332
Q ss_pred ccccccccccCHHHHHHHHHHHHcC
Q 010940 424 GLEDKSGLVIKREKVKEAIEKLMDR 448 (497)
Q Consensus 424 ~~~~~~~~~~~~~~l~~ai~~vl~~ 448 (497)
-+++++.+.|.++.++
T Consensus 138 ---------~~~ee~~~~i~~l~~~ 153 (225)
T 2pju_A 138 ---------ITEEDARGQINELKAN 153 (225)
T ss_dssp ---------SSHHHHHHHHHHHHHT
T ss_pred ---------CCHHHHHHHHHHHHHC
Confidence 4677888888887664
No 173
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=37.21 E-value=36 Score=31.82 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=27.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+||+++-.++.| ..+|..|.++||+|+++....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh
Confidence 589999888877 467889999999999998764
No 174
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=37.18 E-value=24 Score=31.21 Aligned_cols=38 Identities=11% Similarity=0.076 Sum_probs=33.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|||+|..-|+.|=..-...||..|+++|++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 47888777888999999999999999999999986554
No 175
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=36.94 E-value=34 Score=27.63 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
..+++++..++ =+.|++++++.|.++|.+|+++ ...
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 35788876665 5999999999999999999998 443
No 176
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=36.67 E-value=13 Score=34.76 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=27.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHC-----C-CeEEEEeC
Q 010940 5 LPAHQLHFVLIPLMSPGHLIPMIDMARLLAEH-----G-IKVTIVTT 45 (497)
Q Consensus 5 ~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~r-----G-H~Vt~~~~ 45 (497)
|+..+|+|+|+-.+..|. .+|..|.++ | |+|+++..
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 344468999998777774 568888888 9 99999864
No 177
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=36.55 E-value=61 Score=29.36 Aligned_cols=40 Identities=18% Similarity=-0.002 Sum_probs=26.1
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
|.++|+++.++++ ++.. .|- --..+|+.|.++|++|+++.
T Consensus 21 ~~~~~~l~~k~vl-VTGa-s~g--IG~aia~~L~~~G~~V~~~~ 60 (276)
T 2b4q_A 21 MHPYFSLAGRIAL-VTGG-SRG--IGQMIAQGLLEAGARVFICA 60 (276)
T ss_dssp CCTTTCCTTCEEE-EETT-TSH--HHHHHHHHHHHTTCEEEEEC
T ss_pred cccccCCCCCEEE-EeCC-CCh--HHHHHHHHHHHCCCEEEEEe
Confidence 4555555444444 4443 343 35678999999999998875
No 178
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=36.47 E-value=38 Score=27.60 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
..++|+++-. |.+- ..+|+.|.++|++|+++...
T Consensus 18 ~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 4578998854 4433 56899999999999998754
No 179
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=36.38 E-value=22 Score=33.34 Aligned_cols=31 Identities=16% Similarity=0.294 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEE
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIV 43 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~ 43 (497)
.++||+++-.++.| ..+|..|+++||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46899999888887 56789999999999999
No 180
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=35.95 E-value=27 Score=32.26 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+++|++ .|+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 7 ~~~vlV--tGatG~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILI--TGGAGFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEE--ETTTSHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEE--ECCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 567777 45666554 47899999999999998644
No 181
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=35.94 E-value=2.2e+02 Score=25.20 Aligned_cols=41 Identities=2% Similarity=-0.105 Sum_probs=24.8
Q ss_pred CCCCcEEEEEcCCCccCHH--HHHHHHHHHHHCCCeEEEEeCC
Q 010940 6 PAHQLHFVLIPLMSPGHLI--PMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 6 ~~~~~~il~~~~p~~GHi~--P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+++..+|+++.......+. -.-.+-+++.++|+++.+....
T Consensus 2 s~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 44 (291)
T 3l49_A 2 SLEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAG 44 (291)
T ss_dssp CCTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 3567788777654333222 2345666777788888777543
No 182
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=35.94 E-value=64 Score=28.79 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=24.0
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 6 PAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 6 ~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
.++.+++++ +. +.|-+ -..+|+.|.++|++|+++.-
T Consensus 9 ~l~~k~vlV-TG-as~gI--G~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 9 DLSGRKAIV-TG-GSKGI--GAAIARALDKAGATVAIADL 44 (263)
T ss_dssp CCTTCEEEE-ET-TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEE-eC-CCChH--HHHHHHHHHHCCCEEEEEeC
Confidence 344445544 43 33433 46789999999999998764
No 183
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=35.92 E-value=28 Score=33.52 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|.+.+|+|+-.+-.| +.+|..|+++|++|+++-.
T Consensus 3 ~~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 3 PTTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 557899998776444 8899999999999999954
No 184
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=35.82 E-value=39 Score=29.16 Aligned_cols=30 Identities=3% Similarity=0.194 Sum_probs=23.8
Q ss_pred CCccccccCCCchhHHHHHhhCCceeecccc
Q 010940 365 RAIGGFLTHCGWNSTLEGVSAGVPLVTCPLF 395 (497)
Q Consensus 365 ~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~ 395 (497)
..++++|+.||........ -++|+|-++..
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s 79 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVT 79 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCC
Confidence 3444599999988888875 57999999974
No 185
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=35.77 E-value=47 Score=30.63 Aligned_cols=32 Identities=9% Similarity=0.089 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++++++..+. - --..+|+.|.++|++|.++.-
T Consensus 32 k~vlVTGas~-g--IG~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 32 RAAVVTGGAS-G--IGLATATEFARRGARLVLSDV 63 (301)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEEC
Confidence 4555555543 2 457899999999999988764
No 186
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=34.83 E-value=29 Score=32.96 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|.+++|++ +++.|.+- ..|++.|.++||+|+.++-.
T Consensus 3 ~~~~~ilV--tGatG~iG--~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 3 QQKKTIAV--VGATGRQG--ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCCCEEE--ESTTSHHH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEE--ECCCCHHH--HHHHHHHHhCCCEEEEEECC
Confidence 44567777 46666554 46789999999999998744
No 187
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=34.75 E-value=1.4e+02 Score=27.42 Aligned_cols=108 Identities=7% Similarity=-0.006 Sum_probs=59.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
.+++||+++.++..+ -+.+|..+-.+. ..+|.++.+..- ..+... +...|+.+..+|.. .
T Consensus 87 ~~~~ri~vl~Sg~g~---nl~~ll~~~~~g~l~~~i~~Visn~p-~~~~~~-----A~~~gIp~~~~~~~------~--- 148 (288)
T 3obi_A 87 ETRRKVMLLVSQSDH---CLADILYRWRVGDLHMIPTAIVSNHP-RETFSG-----FDFGDIPFYHFPVN------K--- 148 (288)
T ss_dssp TSCEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESSC-GGGSCC-----TTTTTCCEEECCCC------T---
T ss_pred CCCcEEEEEEcCCCC---CHHHHHHHHHCCCCCeEEEEEEcCCC-hhHHHH-----HHHcCCCEEEeCCC------c---
Confidence 357899988887743 344555554432 247776654320 111111 23338888887521 0
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
... ......+.+++++. ++|+||.-.+. .....+.....-.++.+.++
T Consensus 149 ------~~r----------~~~~~~~~~~l~~~--~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 149 ------DTR----------RQQEAAITALIAQT--HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp ------TTH----------HHHHHHHHHHHHHH--TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ------ccH----------HHHHHHHHHHHHhc--CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 000 01123456667777 99999976543 45555666666667765544
No 188
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=34.75 E-value=31 Score=30.94 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=31.5
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 9 QLHFVLIP--LMSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 9 ~~~il~~~--~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
+++++.+. -++.|=..-...||..|+++|++|.++=....
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 44554444 36888999999999999999999999965543
No 189
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=34.60 E-value=63 Score=30.90 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=29.5
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 4 PLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 4 ~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
.|+.++++|+++..+ .....+++++++.||+|..+.....
T Consensus 6 pm~~~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 6 ALRPAATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYAD 45 (391)
T ss_dssp TTSTTCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCCC
Confidence 344457899998543 2457889999999999998876543
No 190
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=34.53 E-value=1.8e+02 Score=25.52 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=16.5
Q ss_pred HhhHHHHHHHhhcCCCCcEEEeCC
Q 010940 105 MLKQPFEQLFDKLHPRPSCIISGK 128 (497)
Q Consensus 105 ~~~~~l~~ll~~~~~~pDlvI~D~ 128 (497)
.....+.+++++. +||+|++..
T Consensus 82 ~~~~~l~~~ir~~--~P~~V~t~~ 103 (227)
T 1uan_A 82 EQRLKLAQALRRL--RPRVVFAPL 103 (227)
T ss_dssp HHHHHHHHHHHHH--CEEEEEEEC
T ss_pred HHHHHHHHHHHHh--CCCEEEeCC
Confidence 3456677788888 999999754
No 191
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=34.29 E-value=66 Score=28.39 Aligned_cols=36 Identities=8% Similarity=0.133 Sum_probs=24.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 6 PAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 6 ~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
.++.+++++ +. +.|- --..+|+.|.++|++|+++.-
T Consensus 8 ~~~~k~vlI-TG-asgg--iG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 8 RLDGACAAV-TG-AGSG--IGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CCTTCEEEE-ET-TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEE-EC-CCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 344445554 43 3343 356889999999999998864
No 192
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=34.27 E-value=43 Score=30.47 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=32.3
Q ss_pred CCCcEEEEEcCC---CccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 7 AHQLHFVLIPLM---SPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 7 ~~~~~il~~~~p---~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|..+|..|++.+ +.|-=.-.-+|+..|+.||++||..=-.+
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccc
Confidence 456799999986 55666778889999999999999975443
No 193
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=34.27 E-value=32 Score=31.86 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+|++ .++.|.+- ..|+++|.++||+|+.++-..
T Consensus 13 ~ilV--tGatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILI--FGGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEE--ETTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEE--ECCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 6666 45566653 568899999999999987543
No 194
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=34.23 E-value=2.2e+02 Score=26.74 Aligned_cols=110 Identities=13% Similarity=0.066 Sum_probs=60.8
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhC-CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
+.+|.+|.+. ...+.++... +..++.++..+. +... .....++ ..+-..+++|..+++
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~-----------~~~~-~a~~~g~--~~~~~~~~ll~~~~~ 66 (359)
T 3e18_A 8 LVIVGYGGMG-------SYHVTLASAADNLEVHGVFDILA-----------EKRE-AAAQKGL--KIYESYEAVLADEKV 66 (359)
T ss_dssp EEEECCSHHH-------HHHHHHHHTSTTEEEEEEECSSH-----------HHHH-HHHTTTC--CBCSCHHHHHHCTTC
T ss_pred EEEECcCHHH-------HHHHHHHHhCCCcEEEEEEcCCH-----------HHHH-HHHhcCC--ceeCCHHHHhcCCCC
Confidence 7788888765 2345566655 344444443321 1111 1112333 234567788886666
Q ss_pred cccccCCCc----hhHHHHHhhCCceee-cccc--ccccchHHHHHHHHcceEEecccc
Q 010940 368 GGFLTHCGW----NSTLEGVSAGVPLVT-CPLF--AEQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 368 ~~~I~HgG~----gt~~eal~~GvP~v~-iP~~--~DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
.+++--.-. --+.+|+.+|+++++ =|+. .++-.-...++++.|+=+.+....
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~ 125 (359)
T 3e18_A 67 DAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNR 125 (359)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeee
Confidence 556544333 346788999999987 3543 334443334446678776665543
No 195
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.14 E-value=20 Score=28.75 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.||+++-.+..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4689988765544 57899999999999999855
No 196
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=33.84 E-value=28 Score=32.83 Aligned_cols=37 Identities=11% Similarity=0.017 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|.+++|++ .|+.|.+- ..|+++|.++||+|+.++-..
T Consensus 8 M~~~~IlV--tGatG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLI--AGATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEE--ECTTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEE--ECCCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 44567877 56666554 568899999999999998654
No 197
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=33.81 E-value=1.6e+02 Score=24.73 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=63.4
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEe---ccccchHHhhhcC
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFII---RGWAPQVLLLSHR 365 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v---~~~~pq~~lL~~~ 365 (497)
+++.-.||+.... ...+++.|.+.+..+-++....-.. +.-|+.++.- .. .++. ..|++|-.+-..+
T Consensus 8 IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~~-----fi~~~~l~~l-~~-~v~~~~~~~~~~hi~l~~~a 77 (175)
T 3qjg_A 8 VLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGRK-----FINGEILKQF-CD-NYYDEFEDPFLNHVDIANKH 77 (175)
T ss_dssp EEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGGG-----GSCHHHHHHH-CS-CEECTTTCTTCCHHHHHHTC
T ss_pred EEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHHH-----HhhHHHHHHh-cC-CEEecCCCCccccccccchh
Confidence 6666667776542 3456777877788776666543221 1023334321 11 3332 1346676666666
Q ss_pred CccccccCCCchhHH-------------HHHhhCCceeeccccc----cc---cchHHHHHHHHcc
Q 010940 366 AIGGFLTHCGWNSTL-------------EGVSAGVPLVTCPLFA----EQ---FYNEKLAVQVLGI 411 (497)
Q Consensus 366 ~~~~~I~HgG~gt~~-------------eal~~GvP~v~iP~~~----DQ---~~na~~~~~~~G~ 411 (497)
++ .+|.-|-+||+. -++..++|+|++|-.- .. ..|-.++ ++.|+
T Consensus 78 D~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L-~~~G~ 141 (175)
T 3qjg_A 78 DK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLL-KDYGV 141 (175)
T ss_dssp SE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHH-HHTTC
T ss_pred CE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHH-HHCCC
Confidence 65 577777766544 3477799999999432 22 3466677 43665
No 198
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=33.28 E-value=39 Score=28.60 Aligned_cols=43 Identities=7% Similarity=0.101 Sum_probs=28.2
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 4 PLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 4 ~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
.|...+.+|+++.....=. .=++.-.+.|++.|++|+++++..
T Consensus 3 ~m~~t~~~v~il~~~gFe~-~E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 3 AMGKTNNILYVMSGQNFQD-EEYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp --CCCCEEEEECCSEEECH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ccccCCCEEEEECCCCccH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 3444455566655544433 346677888999999999999764
No 199
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=33.09 E-value=38 Score=32.57 Aligned_cols=39 Identities=10% Similarity=0.062 Sum_probs=29.5
Q ss_pred CCcEEEEEcCCCcc-C---HHHHHHHHHHH-HHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPG-H---LIPMIDMARLL-AEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~G-H---i~P~l~LA~~L-~~rGH~Vt~~~~~ 46 (497)
.++||+++..+-.+ | +.....++++| .++||+|+.+...
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 36799998776444 3 34578899999 9999999998643
No 200
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=32.96 E-value=24 Score=32.72 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
..+++|.|+-.+..| ..+|+.|+++||+|++..
T Consensus 5 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~d 37 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGAD 37 (303)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEE
Confidence 346799999777666 468999999999999885
No 201
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=32.86 E-value=41 Score=29.68 Aligned_cols=32 Identities=9% Similarity=-0.119 Sum_probs=22.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+.++++..+. . --..+|+.|.++|++|+++.-
T Consensus 8 k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 8 RRVLVYGGRG-A--LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCCc-H--HHHHHHHHHHhCCCEEEEEeC
Confidence 4455554443 2 456899999999999998864
No 202
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=32.55 E-value=30 Score=31.92 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+|+|+|+-.+..| ..+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4689998776666 4678999999999999864
No 203
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=32.29 E-value=1.1e+02 Score=24.16 Aligned_cols=48 Identities=6% Similarity=0.099 Sum_probs=31.7
Q ss_pred hCCceeeccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHHHHHHHHHHcC
Q 010940 385 AGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVKEAIEKLMDR 448 (497)
Q Consensus 385 ~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 448 (497)
..+|+|++--..|.......+ + .|+--.+.+ . ++.++|..+|+.++..
T Consensus 74 ~~~pii~ls~~~~~~~~~~~~-~-~g~~~~l~k-P-------------~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAVQAI-Q-DGAYDFIAK-P-------------FAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGGHHHHHHHH-H-TTCCEEEES-S-------------CCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHH-h-cCCCeEEeC-C-------------CCHHHHHHHHHHHHHH
Confidence 478888885544433333333 4 676555544 2 7899999999999974
No 204
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=32.10 E-value=52 Score=29.92 Aligned_cols=42 Identities=12% Similarity=0.150 Sum_probs=31.6
Q ss_pred hHHHHHHHhhcCCCCcEEEeCCCCc------chHHHHHHcCCCeEEEccc
Q 010940 107 KQPFEQLFDKLHPRPSCIISGKNLP------WTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 107 ~~~l~~ll~~~~~~pDlvI~D~~~~------~~~~~A~~lgiP~v~~~~~ 150 (497)
...+.+++++. +||+||+..... .+..+|..||+|.++.+..
T Consensus 101 a~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 101 GRILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 34456666666 899999877542 5677999999999987654
No 205
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=32.07 E-value=2.3e+02 Score=23.89 Aligned_cols=148 Identities=14% Similarity=0.105 Sum_probs=77.8
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCC
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRA 366 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 366 (497)
+|.|-|-+||.. +.+..++..+.|+.++..+-+.+-+-++ .|+.+.+ |+-. .....
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR--------tp~~l~~-----------~~~~---a~~~g 77 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--------TPDYMFE-----------YAET---ARERG 77 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHH-----------HHHH---TTTTT
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc--------ChHHHHH-----------HHHH---HHhcC
Confidence 346878888876 5667788889999999887776666555 5543321 1110 01122
Q ss_pred ccccccCCCch----hHHHHHhhCCceeeccccccc---cchHHHHHHHHcceEEeccccccccccccccccccCHHHHH
Q 010940 367 IGGFLTHCGWN----STLEGVSAGVPLVTCPLFAEQ---FYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKVK 439 (497)
Q Consensus 367 ~~~~I~HgG~g----t~~eal~~GvP~v~iP~~~DQ---~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l~ 439 (497)
++++|.=.|.- ++. |-..-+|+|.+|..... .+.-.-+++ .=-|+-+-.-. .. ++.-.+..-+.
T Consensus 78 ~~ViIa~AG~aahLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTva-----ig--~~ga~NAallA 148 (181)
T 4b4k_A 78 LKVIIAGAGGAAHLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVA-----IG--KAGSTNAGLLA 148 (181)
T ss_dssp CCEEEEEECSSCCHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECC-----SS--HHHHHHHHHHH
T ss_pred ceEEEEeccccccchhhH-HhcCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEe-----cC--CccHHHHHHHH
Confidence 33366555532 333 33567899999986532 221122222 33343332211 00 00001222233
Q ss_pred HHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 440 EAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 440 ~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
..|-. +.| ++++++.+.+++.+++.+.+
T Consensus 149 ~qILa-~~d----~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 149 AQILG-SFH----DDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHT-TTC----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc-cCC----HHHHHHHHHHHHHHHHHHHH
Confidence 33322 344 88888888888888766544
No 206
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=31.99 E-value=47 Score=25.93 Aligned_cols=37 Identities=8% Similarity=-0.016 Sum_probs=25.9
Q ss_pred cEEEEEcCCC-ccCH-HHHHHHHHHHHHCC--CeEEEEeCC
Q 010940 10 LHFVLIPLMS-PGHL-IPMIDMARLLAEHG--IKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~-~GHi-~P~l~LA~~L~~rG--H~Vt~~~~~ 46 (497)
+|++|+-+.. .-.. +-.+..|..++++| |+|.++.-.
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 6776655543 2222 34788899999999 899999855
No 207
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=31.97 E-value=71 Score=29.74 Aligned_cols=40 Identities=33% Similarity=0.273 Sum_probs=25.5
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
|.+.|.++.+ +++++..+ |- --..+|+.|+++|++|.+..
T Consensus 1 M~~~~~l~gk-~~lVTGas-~G--IG~~~a~~La~~Ga~Vv~~~ 40 (319)
T 1gz6_A 1 MASPLRFDGR-VVLVTGAG-GG--LGRAYALAFAERGALVVVND 40 (319)
T ss_dssp --CCCCCTTC-EEEETTTT-SH--HHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCCCCCCC-EEEEeCCC-cH--HHHHHHHHHHHCCCEEEEEc
Confidence 6655545444 45555544 32 45678999999999998863
No 208
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=31.95 E-value=38 Score=34.69 Aligned_cols=45 Identities=9% Similarity=0.035 Sum_probs=39.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
.+.+|++.+.++-.|-....-++..|..+|++|..++..--.+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 367999999999999999999999999999999999876544443
No 209
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=31.91 E-value=42 Score=29.39 Aligned_cols=35 Identities=9% Similarity=0.167 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.++|+++ ++.|.+- ..|+++|.++||+|+.+.-.
T Consensus 20 ~~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECC
Confidence 45677774 5555553 57889999999999999844
No 210
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=31.87 E-value=83 Score=28.16 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=24.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 45666666554 457899999999999998763
No 211
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=31.78 E-value=2.5e+02 Score=24.15 Aligned_cols=147 Identities=14% Similarity=0.015 Sum_probs=75.9
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccch--------hHHHHhCCCCeEecccc--ch
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEE--------GFEERTTGRGFIIRGWA--PQ 358 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~--------~~~~~~~~~nv~v~~~~--pq 358 (497)
+++.-.||+... +....+++.|.+.+..+-++.......- . -+. .+.. . ..+-.+.++. +|
T Consensus 10 I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~-i----~~~~~~~~~~~~l~~-l-~g~~v~~~~~~~~h 80 (201)
T 3lqk_A 10 VGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTT-D----TKFGESSEWINKIKQ-I-TEEPIVDSMVKAEP 80 (201)
T ss_dssp EEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCT-T----CCTTCSCHHHHHHHH-H-CCSCCBCSHHHHGG
T ss_pred EEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHH-H----HHhhchhHHHHHHHH-H-hCCCeEeecCcccc
Confidence 666666776644 1234456677677777766654433211 0 111 2221 1 1221122211 23
Q ss_pred HHhhhcCCccccccCCCchhHH----------------HHHhhCCceeeccc----cccccchHHHHHHHHcceEEeccc
Q 010940 359 VLLLSHRAIGGFLTHCGWNSTL----------------EGVSAGVPLVTCPL----FAEQFYNEKLAVQVLGIGVSVGIE 418 (497)
Q Consensus 359 ~~lL~~~~~~~~I~HgG~gt~~----------------eal~~GvP~v~iP~----~~DQ~~na~~~~~~~G~G~~l~~~ 418 (497)
-.+-..++. .+|.-|=+||+. .++..++|+|++|- ...++.|..++ .+.|+=+..+..
T Consensus 81 i~~s~~aD~-mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L-~~~G~~i~~P~~ 158 (201)
T 3lqk_A 81 FGPKTPLDC-MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRL-MATKNIYFIPFG 158 (201)
T ss_dssp GTTTSCCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHH-HTSTTEEECCEE
T ss_pred cccccccCE-EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHH-HHCCCEEECCCC
Confidence 332223333 566666665433 22557999999994 46677799999 547765444332
Q ss_pred cccccccccccccccCHHHHHHHHHHHHcC
Q 010940 419 AAVTWGLEDKSGLVIKREKVKEAIEKLMDR 448 (497)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 448 (497)
.+ .+...+ .+...+.+.|.+.|.+.|++
T Consensus 159 ~~-~~~~~p-~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 159 QD-NPQVKP-NSLVARMEALPETIEAALRG 186 (201)
T ss_dssp ES-CTTTCT-TCEEECGGGHHHHHHHHHTT
T ss_pred cc-ccccCC-CcccCCHHHHHHHHHHHHhc
Confidence 10 011110 01124557889999998875
No 212
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=31.70 E-value=50 Score=27.52 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=28.8
Q ss_pred cEEEEEcCCCcc-----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPG-----HLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~G-----Hi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+|+|+|. +| -..+.-.|++.|.++|.+|.|..+|
T Consensus 24 ~~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 24 SKVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 46777654 33 4578899999999999999999998
No 213
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.69 E-value=23 Score=33.32 Aligned_cols=35 Identities=9% Similarity=0.009 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+++|++ .|+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 24 ~~~~vlV--tGatG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLI--TGVAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEE--ECCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4568877 46666664 57899999999999998754
No 214
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=31.40 E-value=33 Score=30.27 Aligned_cols=43 Identities=14% Similarity=0.017 Sum_probs=33.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHH-HHHCCCeEEEEeCCCCcchhh
Q 010940 11 HFVLIPLMSPGHLIPMIDMARL-LAEHGIKVTIVTTPLNTTRFN 53 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~-L~~rGH~Vt~~~~~~~~~~~~ 53 (497)
-+++...|+.|=..-.+.+|.. +.+.|..|.+++.+...+.+.
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~ 75 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLR 75 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHH
Confidence 3577777999999999998866 455688999999887665443
No 215
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=31.39 E-value=1.2e+02 Score=26.06 Aligned_cols=103 Identities=14% Similarity=0.056 Sum_probs=0.0
Q ss_pred CCCeEEEEeeCCCcCCCHHhHHH---HHHHHHhCCCCEEEEEeC--------------CCCCCCccccccchhHHHHhCC
Q 010940 285 EPGSVIYACLGSICGLATWQLLE---LGLGLEASSQPFIWVIRG--------------GERSQGLEKWIQEEGFEERTTG 347 (497)
Q Consensus 285 ~~~~~V~vs~GS~~~~~~~~~~~---~~~al~~~~~~~i~~~~~--------------~~~~~~~~~~~lp~~~~~~~~~ 347 (497)
..++.|-|-.||. ..++..++. +.+.|++.+..+|.=-+. +...... +|..+..+..+
T Consensus 20 ~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~GG~viGv----~p~~l~~~e~~ 94 (199)
T 3qua_A 20 DRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGGHTVGV----IPKALVHRELA 94 (199)
T ss_dssp -CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTTCCEEEE----EEGGGTTTTTB
T ss_pred CCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEE----eCchhhhcccc
Q ss_pred ----CCeEeccccchHH-hhhcCCccccccCCCchhHHHHHh---------hCCceeec
Q 010940 348 ----RGFIIRGWAPQVL-LLSHRAIGGFLTHCGWNSTLEGVS---------AGVPLVTC 392 (497)
Q Consensus 348 ----~nv~v~~~~pq~~-lL~~~~~~~~I~HgG~gt~~eal~---------~GvP~v~i 392 (497)
...++++...... .+-..+-.+++--||.||.-|... +++|++++
T Consensus 95 ~~~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvll 153 (199)
T 3qua_A 95 DVDAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILL 153 (199)
T ss_dssp CTTSSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred CCCCCeeEEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEE
No 216
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=31.29 E-value=51 Score=27.57 Aligned_cols=37 Identities=24% Similarity=0.453 Sum_probs=28.7
Q ss_pred cEEEEEcCCC---ccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMS---PGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~---~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+|+|+|.=+ .--..+.-.|++.|.++|.+|.|..+|
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4677765421 123568899999999999999999998
No 217
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=31.04 E-value=2.2e+02 Score=26.05 Aligned_cols=108 Identities=6% Similarity=-0.053 Sum_probs=60.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
.+++||+++.++..+ -+.+|.++-.+. ..+|..+.+..-.. +... +...|+.+..+|..
T Consensus 86 ~~~~ri~vl~Sg~g~---nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~-----A~~~gIp~~~~~~~---------- 146 (287)
T 3nrb_A 86 TDRKKVVIMVSKFDH---CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSV-----SLVGDIPFHYLPVT---------- 146 (287)
T ss_dssp TCCCEEEEEECSCCH---HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCC-----CCCTTSCEEECCCC----------
T ss_pred CCCcEEEEEEeCCCc---CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHH-----HHHcCCCEEEEecc----------
Confidence 357899988887743 444555555443 35777766432111 1111 23347888777521
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
.... ......+.+++++. ++|+||.-.+. .....+...+.-.++.+.++
T Consensus 147 --------~~~r-------~~~~~~~~~~l~~~--~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 147 --------PATK-------AAQESQIKNIVTQS--QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp --------GGGH-------HHHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred --------Ccch-------hhHHHHHHHHHHHh--CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 0000 11123456667777 99999976643 45555666666667765544
No 218
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=30.94 E-value=84 Score=28.07 Aligned_cols=39 Identities=23% Similarity=0.104 Sum_probs=24.8
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+.| ++.++ ++++..+ |- --..+|+.|.++||+|+++.-
T Consensus 1 M~~m--~~~k~-vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 1 MAHM--VNGKV-ALVTGAA-QG--IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp -CCC--CTTCE-EEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcc--cCCCE-EEEECCC-Cc--HHHHHHHHHHHCCCEEEEEEC
Confidence 6655 23334 4444433 32 346789999999999998763
No 219
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=30.60 E-value=2.8e+02 Score=25.71 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=59.7
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhC-CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
+.+|.+|.+. ..++.++... +..++.++..+... -+.+.++. ++ ..+-...+++..+++
T Consensus 7 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~~~--------~~~~a~~~---g~--~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 7 IALFGAGRIG-------HVHAANIAANPDLELVVIADPFIEG--------AQRLAEAN---GA--EAVASPDEVFARDDI 66 (344)
T ss_dssp EEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSSHHH--------HHHHHHTT---TC--EEESSHHHHTTCSCC
T ss_pred EEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCCHHH--------HHHHHHHc---CC--ceeCCHHHHhcCCCC
Confidence 7788888765 3456666655 44555444432110 01222111 22 223456778875555
Q ss_pred cccccCCCc----hhHHHHHhhCCceeec-cccc--cccchHHHHHHHHcceEEecccc
Q 010940 368 GGFLTHCGW----NSTLEGVSAGVPLVTC-PLFA--EQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 368 ~~~I~HgG~----gt~~eal~~GvP~v~i-P~~~--DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
.+++----. --+.+|+.+|+++++= |+.. ++-.-...++++.|+-+.+....
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~ 125 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNR 125 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGG
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchh
Confidence 445543333 3467889999998873 5443 33333333446678777776554
No 220
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=30.34 E-value=58 Score=29.42 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=31.1
Q ss_pred hHHHHHHHhhcCCCCcEEEeCCCCc------chHHHHHHcCCCeEEEccc
Q 010940 107 KQPFEQLFDKLHPRPSCIISGKNLP------WTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 107 ~~~l~~ll~~~~~~pDlvI~D~~~~------~~~~~A~~lgiP~v~~~~~ 150 (497)
...+.+++++. +||+||+..... .+..+|..||+|.++.+..
T Consensus 105 A~~La~~i~~~--~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 105 ARVLAKLAEKE--KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHhc--CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 34455666666 899999877442 5677999999999987654
No 221
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=29.92 E-value=2.9e+02 Score=25.78 Aligned_cols=131 Identities=17% Similarity=0.042 Sum_probs=0.0
Q ss_pred eEEEEeeCCCcCCCHHhHHHHHHHHHhC--CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcC
Q 010940 288 SVIYACLGSICGLATWQLLELGLGLEAS--SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHR 365 (497)
Q Consensus 288 ~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~ 365 (497)
.+.+|.+|.+. ...+.++.+. +..++.++..+.. --+.+.++.. +..+-..+++|..+
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~~~--------~~~~~~~~~~-----~~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVCDIDPA--------ALKAAVERTG-----ARGHASLTDMLAQT 74 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSSHH--------HHHHHHHHHC-----CEEESCHHHHHHHC
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCCHH--------HHHHHHHHcC-----CceeCCHHHHhcCC
Q ss_pred CccccccCCCchh----HHHHHhhCCceee---ccccccccchHHHHHHHHcceEEeccccccccccccccccccCHHHH
Q 010940 366 AIGGFLTHCGWNS----TLEGVSAGVPLVT---CPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGLVIKREKV 438 (497)
Q Consensus 366 ~~~~~I~HgG~gt----~~eal~~GvP~v~---iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l 438 (497)
++.+++----... +.+|+.+|+++++ +-...++-.-...++++.|+-+.+.... .+.+ .
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~------------r~~p--~ 140 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQN------------RRNA--T 140 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGG------------GGSH--H
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcc------------cCCH--H
Q ss_pred HHHHHHHHcCCchh
Q 010940 439 KEAIEKLMDRGKQG 452 (497)
Q Consensus 439 ~~ai~~vl~~~~~~ 452 (497)
...+++++++++.+
T Consensus 141 ~~~~k~~i~~g~iG 154 (354)
T 3q2i_A 141 LQLLKRAMQEKRFG 154 (354)
T ss_dssp HHHHHHHHHTTTTC
T ss_pred HHHHHHHHhcCCCC
No 222
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=29.78 E-value=82 Score=30.68 Aligned_cols=36 Identities=17% Similarity=0.059 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
.+++|+++..+ .....++++|+++||+|..+.....
T Consensus 18 ~~~~ili~g~g-----~~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 18 SAQKILLLGSG-----ELGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEECCCC
Confidence 35689998543 2457789999999999998876544
No 223
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.69 E-value=1.1e+02 Score=28.12 Aligned_cols=107 Identities=7% Similarity=0.104 Sum_probs=60.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
.+++||+++.++. || -+.+|..+-.+. ..+|..+.+..- .+... +...|+.+..+|.. .
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~--~~~~~-----A~~~gIp~~~~~~~------~--- 153 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHP--DFAPL-----AAQHGLPFRHFPIT------A--- 153 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSS--TTHHH-----HHHTTCCEEECCCC------S---
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcH--HHHHH-----HHHcCCCEEEeCCC------c---
Confidence 3578999888776 44 455555555443 368777664321 11111 12227888887521 0
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
... ......+.+++++. ++|+||.-.+. .....+.....-.++.+.++
T Consensus 154 ------~~r----------~~~~~~~~~~l~~~--~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 154 ------DTK----------AQQEAQWLDVFETS--GAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp ------SCH----------HHHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ------CCH----------HHHHHHHHHHHHHh--CCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 000 01123456667777 99999976643 45555666666667765544
No 224
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=29.54 E-value=46 Score=25.43 Aligned_cols=29 Identities=14% Similarity=0.131 Sum_probs=23.3
Q ss_pred ccCHHHHHHHHHHHHHC-CC-eEEEEeCCCC
Q 010940 20 PGHLIPMIDMARLLAEH-GI-KVTIVTTPLN 48 (497)
Q Consensus 20 ~GHi~P~l~LA~~L~~r-GH-~Vt~~~~~~~ 48 (497)
.......+.+|..+.+. || +|+++.....
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 34567789999999999 99 9999886643
No 225
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=29.29 E-value=64 Score=29.94 Aligned_cols=35 Identities=6% Similarity=0.117 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC-C-CeEEEEeCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEH-G-IKVTIVTTPL 47 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~r-G-H~Vt~~~~~~ 47 (497)
|.+++|+++..+.. ++|++.|++. | ++|.++....
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 45679999866654 5799999986 7 8888886543
No 226
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=29.24 E-value=57 Score=29.95 Aligned_cols=38 Identities=21% Similarity=0.395 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCccCHHHH--HHHHHHHHHCC-CeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPM--IDMARLLAEHG-IKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~--l~LA~~L~~rG-H~Vt~~~~~ 46 (497)
+++|||++ .+..+|-.+. -.|++.|.+.| ++|++...+
T Consensus 3 ~~~kvLiv-~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLI-TGQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEE-ESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEE-cCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 58999999 4445886555 57888888888 999999865
No 227
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=29.19 E-value=33 Score=32.41 Aligned_cols=39 Identities=5% Similarity=0.047 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccCH----HHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHL----IPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi----~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+++||+++..+..+-. .....++++|.+.||+|..+...
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 4678988875433222 25677899999999999988643
No 228
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=29.11 E-value=3.1e+02 Score=26.68 Aligned_cols=143 Identities=10% Similarity=0.093 Sum_probs=75.3
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcC-
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHR- 365 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~- 365 (497)
.+.|-|-+||.. +....++....|+.+|..+-+.+-+-++ +|+.+. .+..+-.- ...
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saHR--------~p~~~~-----------~~~~~~~~-~g~~ 322 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAHK--------GPDETL-----------RIKAEYEG-DGIP 322 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHH-----------HHHHHHHT-TCCC
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeeccC--------CHHHHH-----------HHHHHHHH-CCCC
Confidence 356777788776 5666777888899999887666555444 453321 11111100 011
Q ss_pred CccccccCCCc----hhHHHHHhhCCceeeccccccccchHHHHHH-H--HcceEEeccccccccccccccccccCHHHH
Q 010940 366 AIGGFLTHCGW----NSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQ-V--LGIGVSVGIEAAVTWGLEDKSGLVIKREKV 438 (497)
Q Consensus 366 ~~~~~I~HgG~----gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~-~--~G~G~~l~~~~~~~~~~~~~~~~~~~~~~l 438 (497)
.+ +|.=+|. .++..+ ..-+|+|.+|....-......+.- + .|+.+..-.+. .+..-+
T Consensus 323 ~v--iIa~AG~~a~Lpgvva~-~t~~PVIgvP~~~~~~G~daLls~vqmp~g~pvatv~~~-------------~nAa~~ 386 (425)
T 2h31_A 323 TV--FVAVAGRSNGLGPVMSG-NTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSP-------------EGSAQF 386 (425)
T ss_dssp EE--EEEECCSSCCHHHHHHH-HCSSCEEECCCCCTTTHHHHGGGTSSCCSSCCCEECCCH-------------HHHHHH
T ss_pred eE--EEEEcCcccchHhHHhc-cCCCCEEEeeCccccccHHHHHHHhcCCCCCceEEecCc-------------hHHHHH
Confidence 23 6666554 244434 357999999974221111122200 0 23332211111 444445
Q ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 439 KEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 439 ~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
...|. -+.| +.++++.+..+......+.+
T Consensus 387 A~~Il-~~~~----~~l~~kl~~~~~~~~~~v~~ 415 (425)
T 2h31_A 387 AAQIF-GLSN----HLVWSKLRASILNTWISLKQ 415 (425)
T ss_dssp HHHHH-HTTC----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-ccCC----HHHHHHHHHHHHHHHHHHHH
Confidence 54443 3455 77888888877777665444
No 229
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=29.07 E-value=42 Score=30.83 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++|++ .++.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~ilV--tGatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 5 SRVLI--VGGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCEEE--ESTTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CEEEE--EcCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 46776 45666663 46789999999999988754
No 230
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=29.04 E-value=57 Score=27.84 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=28.6
Q ss_pred cEEEEEcCCCcc-----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPG-----HLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~G-----Hi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+|+|+|. || -..+.-.|++.|.++|.+|.|..+|
T Consensus 47 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEcC--chHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 46777654 33 3568889999999999999999998
No 231
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=29.03 E-value=69 Score=25.26 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=25.7
Q ss_pred EEEcCCCcc--CHHHHHHHHHHHHHCCCeE-EEEeCCC
Q 010940 13 VLIPLMSPG--HLIPMIDMARLLAEHGIKV-TIVTTPL 47 (497)
Q Consensus 13 l~~~~p~~G--Hi~P~l~LA~~L~~rGH~V-t~~~~~~ 47 (497)
++++.+.+| .....+.+|.++.+.||+| +++....
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 334444443 4667899999999999999 8887653
No 232
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=28.98 E-value=1.2e+02 Score=28.90 Aligned_cols=41 Identities=7% Similarity=-0.019 Sum_probs=34.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcch
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTR 51 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~ 51 (497)
-+++...|+.|-..-.+.+|..+..+|..|.|+..+...+.
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~~ 116 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDP 116 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCH
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChhH
Confidence 35667778999999999999999999999999998865443
No 233
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=28.96 E-value=66 Score=27.24 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccCHHHHH-HHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMI-DMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l-~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+||+++-....|+..-+. .+++.|.+.|++|.++.-.
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 3578777766678765544 3566677789999887643
No 234
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=28.95 E-value=1.4e+02 Score=26.44 Aligned_cols=32 Identities=16% Similarity=0.011 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++++++..+.| --.++|+.|.++|++|.++.-
T Consensus 8 k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 8 ATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 45555555543 457899999999999998864
No 235
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=28.77 E-value=2.5e+02 Score=23.26 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=74.2
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCcc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIG 368 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~ 368 (497)
.|-|-+||.. +.+..++....|+.++..+=+.+-+-++ +|+.+.+ |+.+ .....++
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR--------~p~~~~~-----------~~~~---a~~~g~~ 60 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAHR--------TPKMMVQ-----------FASE---ARERGIN 60 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHH-----------HHHH---TTTTTCC
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCcC--------CHHHHHH-----------HHHH---HHhCCCc
Confidence 5666677765 5666778888899999887666655544 4543321 1100 0111123
Q ss_pred ccccCCCc----hhHHHHHhhCCceeecccccccc-chHHHH--HH-HHcc--eEE-eccccccccccccccccccCHHH
Q 010940 369 GFLTHCGW----NSTLEGVSAGVPLVTCPLFAEQF-YNEKLA--VQ-VLGI--GVS-VGIEAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 369 ~~I~HgG~----gt~~eal~~GvP~v~iP~~~DQ~-~na~~~--~~-~~G~--G~~-l~~~~~~~~~~~~~~~~~~~~~~ 437 (497)
++|.=.|. .++.-+ ..-+|+|.+|....-. .....+ ++ -.|+ +.. +++.. ..+..-
T Consensus 61 ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~------------~~nAa~ 127 (163)
T 3ors_A 61 IIIAGAGGAAHLPGMVAS-LTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAG------------AKNAGI 127 (163)
T ss_dssp EEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHH------------HHHHHH
T ss_pred EEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcc------------cHHHHH
Confidence 37766664 244433 4679999999754311 122222 12 0233 221 11101 134444
Q ss_pred HHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhc
Q 010940 438 VKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIG 471 (497)
Q Consensus 438 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~ 471 (497)
+...|.. +.| +.++++.+.+++.+++.+.
T Consensus 128 lAa~Il~-~~d----~~l~~kl~~~r~~~~~~v~ 156 (163)
T 3ors_A 128 LAARMLS-IQN----PSLVEKLNQYESSLIQKVE 156 (163)
T ss_dssp HHHHHHH-TTC----THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-CCC----HHHHHHHHHHHHHHHHHHH
Confidence 4444433 344 7888888888888876543
No 236
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=28.68 E-value=41 Score=29.07 Aligned_cols=32 Identities=9% Similarity=0.134 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+|++ .++.|-+- ..|+++|.++||+|+.+.-.
T Consensus 2 ~ilI--tGatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 2 KIFI--VGSTGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp EEEE--ESTTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred eEEE--ECCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 6666 35555444 58899999999999998744
No 237
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=28.51 E-value=62 Score=28.19 Aligned_cols=31 Identities=29% Similarity=0.336 Sum_probs=21.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 12 FVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 12 il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
.++++ ++.|-+ -..+++.|.++||+|+++.-
T Consensus 7 ~vlVt-Gasggi--G~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 7 AVLIT-GASRGI--GEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp EEEES-STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CCCcHH--HHHHHHHHHHCCCEEEEEEC
Confidence 34444 444433 46899999999999998864
No 238
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=28.39 E-value=60 Score=29.62 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=30.4
Q ss_pred EEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 11 HFVLIPL--MSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 11 ~il~~~~--p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+++.+.. ++.|=..-...||..|+++|++|.++=...
T Consensus 5 kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 5 RVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp EEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4544443 788999999999999999999999986665
No 239
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=28.35 E-value=58 Score=29.35 Aligned_cols=41 Identities=15% Similarity=0.022 Sum_probs=30.3
Q ss_pred HHHHHHHhhcCCCCcEEEeCCCCc------chHHHHHHcCCCeEEEccc
Q 010940 108 QPFEQLFDKLHPRPSCIISGKNLP------WTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 108 ~~l~~ll~~~~~~pDlvI~D~~~~------~~~~~A~~lgiP~v~~~~~ 150 (497)
..+.+++++. +||+||+..... .+..+|..||+|.++.+..
T Consensus 103 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 103 KILAAVARAE--GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 3455555555 899999777442 5677999999999987654
No 240
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=28.34 E-value=71 Score=28.55 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++++++.++.| --..+|+.|.++|++|.++.-.
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 45556555543 4578899999999999887643
No 241
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=28.23 E-value=83 Score=32.72 Aligned_cols=38 Identities=13% Similarity=-0.048 Sum_probs=24.8
Q ss_pred HHHHhhcCCCCcEEEeCCC-CcchHHHHHHcCCCeEEEccc
Q 010940 111 EQLFDKLHPRPSCIISGKN-LPWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 111 ~~ll~~~~~~pDlvI~D~~-~~~~~~~A~~lgiP~v~~~~~ 150 (497)
.+.+++. +||++|+=.+ ......+-......++.+.++
T Consensus 68 ~~~l~~~--~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 68 VERIAQL--SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHH--CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHhc--CCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 4455666 9999987554 344455566666677777665
No 242
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=28.23 E-value=60 Score=27.80 Aligned_cols=35 Identities=29% Similarity=0.513 Sum_probs=28.7
Q ss_pred cEEEEEcCCCcc-----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPG-----HLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~G-----Hi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+|+|+|. || -..+.-.|++.|.++|.+|.|..+|
T Consensus 46 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPG--YGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECC--chHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 46777654 33 4578889999999999999999998
No 243
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=28.12 E-value=41 Score=31.61 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++||.|+-.+..| ..+|..|.++||+|++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 5789999888877 5789999999999998864
No 244
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=27.78 E-value=50 Score=30.16 Aligned_cols=30 Identities=7% Similarity=0.158 Sum_probs=24.0
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 10 LHFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 10 ~~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
++|+|+-. +..| ..+|+.|.++||+|+++.
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~ 42 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIE 42 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEEC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEE
Confidence 68999876 6665 467889999999998765
No 245
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=27.67 E-value=2.8e+02 Score=27.46 Aligned_cols=41 Identities=10% Similarity=-0.090 Sum_probs=35.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCCCCcchh
Q 010940 12 FVLIPLMSPGHLIPMIDMARLLAEH-GIKVTIVTTPLNTTRF 52 (497)
Q Consensus 12 il~~~~p~~GHi~P~l~LA~~L~~r-GH~Vt~~~~~~~~~~~ 52 (497)
+++...|+.|=..-.+.+|..++.+ |..|.|++.+...+.+
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 5677779999999999999999987 9999999998765543
No 246
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=27.63 E-value=20 Score=33.39 Aligned_cols=39 Identities=13% Similarity=0.103 Sum_probs=28.0
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|..| .|...+|+++-.+..| +.+|..|+++||+|+++-.
T Consensus 1 M~~~-~~~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 1 MNGL-ETHNTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp ---C-EEEEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCC-CCCCCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 5543 2445788888777555 7889999999999999875
No 247
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=27.50 E-value=1.1e+02 Score=27.16 Aligned_cols=35 Identities=6% Similarity=-0.023 Sum_probs=23.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++.++++ ++. +.|- --..++++|.++|++|+++.-
T Consensus 12 l~~k~vl-ITG-asgg--iG~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 12 LKAKTVL-VTG-GTKG--IGHAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp CTTCEEE-ETT-TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEE-EEC-CCCH--HHHHHHHHHHHCCCEEEEEeC
Confidence 3344444 444 3443 346889999999999998864
No 248
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=27.46 E-value=3.2e+02 Score=24.13 Aligned_cols=28 Identities=7% Similarity=-0.220 Sum_probs=19.1
Q ss_pred CCcEEEeCCCCcch-HHHHHHcCCCeEEE
Q 010940 120 RPSCIISGKNLPWT-VNSAIKFKIPTILF 147 (497)
Q Consensus 120 ~pDlvI~D~~~~~~-~~~A~~lgiP~v~~ 147 (497)
++|.||.-.++..+ ..+-+.+++|++.+
T Consensus 69 g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 69 GVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp TCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred CCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 89999977766433 33455679998864
No 249
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=27.44 E-value=80 Score=29.88 Aligned_cols=40 Identities=25% Similarity=0.272 Sum_probs=34.0
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 9 QLHFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 9 ~~~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
..+|+|++. ++.|=..-...||..|+++|++|.++.....
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 455666555 8999999999999999999999999998873
No 250
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=27.42 E-value=45 Score=28.86 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++|++ .++.|.+- ..|++.|.++||+|+.+.-.
T Consensus 5 ~~ilI--tGatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVL--IGASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEE--ETCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEE--EcCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 57777 45566554 57899999999999998744
No 251
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=27.36 E-value=71 Score=28.02 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=23.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
++.+++++ + ++.|-+ -..+|+.|.++|++|+++.
T Consensus 3 l~~~~vlI-t-Gasggi--G~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIV-T-GSSRGL--GKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp TTTCEEEE-S-SCSSHH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEE-E-CCCchH--HHHHHHHHHHCCCEEEEEc
Confidence 34445544 3 444544 4688999999999999884
No 252
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=27.32 E-value=57 Score=30.34 Aligned_cols=33 Identities=15% Similarity=0.080 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
.++|++ .++.|.+- ..|+++|.++||+|+.+.-
T Consensus 5 ~~~vlV--TGatGfIG--~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 5 SETVCV--TGASGFIG--SWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp -CEEEE--TTTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEE--ECCchHHH--HHHHHHHHHCCCEEEEEEC
Confidence 446665 56666554 4688999999999987653
No 253
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=27.31 E-value=43 Score=31.76 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEH-GIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~r-GH~Vt~~~~~ 46 (497)
|..++|++ .|+.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 22 m~~~~vlV--tGatG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLI--LGVNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEE--ESCSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEE--ECCCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 44568877 45666665 4678999998 9999999744
No 254
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=27.22 E-value=48 Score=30.83 Aligned_cols=34 Identities=21% Similarity=0.100 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.++|++ .|+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 3 ~~~vlV--tGatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALI--TGIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEE--ECCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 346766 35556553 56889999999999988643
No 255
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=27.19 E-value=1e+02 Score=27.62 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=24.5
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+....++.+++ +++..+ |- --..+|+.|.++|++|.++.-
T Consensus 1 M~~~~~l~~k~v-lVTGas-~g--IG~~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 1 MATGTRYAGKVV-VVTGGG-RG--IGAGIVRAFVNSGARVVICDK 41 (270)
T ss_dssp ---CCTTTTCEE-EEETCS-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCCCCEE-EEECCC-cH--HHHHHHHHHHHCCCEEEEEeC
Confidence 544333334444 444443 32 356899999999999998763
No 256
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=27.06 E-value=2.7e+02 Score=23.17 Aligned_cols=145 Identities=13% Similarity=0.112 Sum_probs=77.8
Q ss_pred eEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 288 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 288 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
|.|-|-+||.. +....++....|+.++..+-+.+-+-++ +|+.+. +|+... ....+
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR--------~p~~~~-----------~~~~~a---~~~g~ 62 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHR--------TPKETV-----------EFVENA---DNRGC 62 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHH-----------HHHHHH---HHTTE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccC--------CHHHHH-----------HHHHHH---HhCCC
Confidence 46777778765 5666778888899999887666655554 454332 111111 11223
Q ss_pred cccccCCCch----hHHHHHhhCCceeeccccc-cccchHHHHHH-H--HcceEE-eccccccccccccccccccCHHHH
Q 010940 368 GGFLTHCGWN----STLEGVSAGVPLVTCPLFA-EQFYNEKLAVQ-V--LGIGVS-VGIEAAVTWGLEDKSGLVIKREKV 438 (497)
Q Consensus 368 ~~~I~HgG~g----t~~eal~~GvP~v~iP~~~-DQ~~na~~~~~-~--~G~G~~-l~~~~~~~~~~~~~~~~~~~~~~l 438 (497)
+++|.=.|.. ++.-+ ..-+|+|.+|... +-......+.- + .|+.+. +...+ .+ .++..-+
T Consensus 63 ~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~------a~----~~nAa~l 131 (169)
T 3trh_A 63 AVFIAAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGK------AG----AKNAAIL 131 (169)
T ss_dssp EEEEEEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTH------HH----HHHHHHH
T ss_pred cEEEEECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCC------cc----chHHHHH
Confidence 3477766643 33333 3468999999853 22223333311 0 243211 11110 00 1333344
Q ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 439 KEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 439 ~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
...|.. +.| +.++++.+.+++.+++.+.+
T Consensus 132 Aa~Il~-~~d----~~l~~kl~~~r~~~~~~v~~ 160 (169)
T 3trh_A 132 AAQIIA-LQD----KSIAQKLVQQRTAKRETLKK 160 (169)
T ss_dssp HHHHHH-TTC----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-CCC----HHHHHHHHHHHHHHHHHHHH
Confidence 444432 445 88999999999988766444
No 257
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.02 E-value=62 Score=29.51 Aligned_cols=35 Identities=14% Similarity=0.244 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.|+++++.++.| --..+|+.|+++|++|.++.-.
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467777766643 4568999999999999888743
No 258
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=26.93 E-value=2.8e+02 Score=27.07 Aligned_cols=42 Identities=14% Similarity=0.210 Sum_probs=34.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCCCCcchh
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAE-HGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~-rGH~Vt~~~~~~~~~~~ 52 (497)
-+++...|+.|=..-.+.+|..+.. .|..|.|++.+...+.+
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~l 247 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQL 247 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHH
Confidence 4677778999999999999999886 69999999988765433
No 259
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=26.89 E-value=58 Score=32.51 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=28.3
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEe
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVT 44 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~ 44 (497)
|....++..++|.++-.+..| +.+|..|+++ ||+|+++-
T Consensus 1 m~~~~~~~~mkI~VIG~G~vG-----~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 1 MTDQVFGKVSKVVCVGAGYVG-----GPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp --CCSSCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEEC
T ss_pred CCCCCCCCCCEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEE
Confidence 555444556799999777776 4678889888 79999875
No 260
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=26.89 E-value=31 Score=32.93 Aligned_cols=39 Identities=5% Similarity=0.065 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCccCH----HHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHL----IPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi----~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.++||+++..+..+-. .....++++|.++||+|..+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4679988876533322 34477899999999999988643
No 261
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=26.85 E-value=97 Score=27.35 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCe-EEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIK-VTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~-Vt~~~~~ 46 (497)
++.++++++ ++.| .--..+|++|.++|++ |.++.-.
T Consensus 3 l~~k~vlVt--Gas~--gIG~~~a~~l~~~G~~~v~~~~r~ 39 (254)
T 1sby_A 3 LTNKNVIFV--AALG--GIGLDTSRELVKRNLKNFVILDRV 39 (254)
T ss_dssp CTTCEEEEE--TTTS--HHHHHHHHHHHHTCCSEEEEEESS
T ss_pred CCCcEEEEE--CCCC--hHHHHHHHHHHHCCCcEEEEEecC
Confidence 445566554 3344 3457899999999997 7776643
No 262
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=26.82 E-value=2e+02 Score=26.38 Aligned_cols=111 Identities=9% Similarity=0.015 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhhhHhhhhhcCCCeeEEEeeCCCccCCCCCCC
Q 010940 5 LPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNITIKRAVESGLSIQLLQLEFPSVESGLPQGC 84 (497)
Q Consensus 5 ~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~ 84 (497)
.+.+++||+++.++.. .-+.+|..+-.+....+.+..--.+++.+... +...|+.+..+|
T Consensus 86 ~~~~~~ri~vl~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~-----A~~~gIp~~~~~------------ 145 (286)
T 3n0v_A 86 APNHRPKVVIMVSKAD---HCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPL-----AHWHKIPYYHFA------------ 145 (286)
T ss_dssp CTTCCCEEEEEESSCC---HHHHHHHHHHHTTSSCCEEEEEEESSSTTHHH-----HHHTTCCEEECC------------
T ss_pred cCCCCcEEEEEEeCCC---CCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHH-----HHHcCCCEEEeC------------
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCCC-cchHHHHHHcCCCeEEEccc
Q 010940 85 ENMDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKNL-PWTVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~~-~~~~~~A~~lgiP~v~~~~~ 150 (497)
.-...-......+.+++++. ++|+||.-.+. .....+.....-.++.+.++
T Consensus 146 -------------~~~~~r~~~~~~~~~~l~~~--~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 146 -------------LDPKDKPGQERKVLQVIEET--GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp -------------CBTTBHHHHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred -------------CCcCCHHHHHHHHHHHHHhc--CCCEEEecccccccCHHHHhhhcCCeEEeccc
No 263
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=26.72 E-value=69 Score=29.64 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+.++|++ .|+.|.+- ..|++.|.++||+|+.+.-
T Consensus 10 ~~~~vlV--TGatG~iG--~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 10 EGSLVLV--TGANGFVA--SHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp TTCEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEE--ECCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 4567776 45556554 5678999999999998874
No 264
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=26.62 E-value=1.3e+02 Score=31.73 Aligned_cols=116 Identities=6% Similarity=-0.045 Sum_probs=75.1
Q ss_pred eccccchHHhhhcCCccccccCCCchhHHHHHhhCCceeeccccccccchHHHHHHHHcceEEecccccccccccccccc
Q 010940 352 IRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSAGVPLVTCPLFAEQFYNEKLAVQVLGIGVSVGIEAAVTWGLEDKSGL 431 (497)
Q Consensus 352 v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~GvP~v~iP~~~DQ~~na~~~~~~~G~G~~l~~~~~~~~~~~~~~~~ 431 (497)
+..+.+-.++|..+++ .||= =.+.+.|.+..++|+|....-.|++.. + --|...+..+ |-+...
T Consensus 603 ~~~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~-----~--~rg~y~d~~~---~~pg~~--- 666 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDK-----G--LRGFYMNYME---DLPGPI--- 666 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTS-----S--CCSBSSCTTS---SSSSCE---
T ss_pred CCCCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhh-----c--cCCcccChhH---hCCCCe---
Confidence 4556667788988887 8887 456899999999999988654444322 1 1233333221 111111
Q ss_pred ccCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHH
Q 010940 432 VIKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGSSHRNIEMLIEFV 487 (497)
Q Consensus 432 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~~~~~~~~~~~~~ 487 (497)
.-+.++|.++|.....+ ...++++.+++.+.+-.. ..|.++++-++.+++..
T Consensus 667 ~~~~~eL~~~i~~~~~~---~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 667 YTEPYGLAKELKNLDKV---QQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDI 718 (729)
T ss_dssp ESSHHHHHHHHTTHHHH---HHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHhhhhcc---chhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcC
Confidence 25788899999887753 256778888888887544 56777766666666553
No 265
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=26.57 E-value=45 Score=29.47 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=26.2
Q ss_pred HHHHHhhcCCCCcEEEeCCCCcc---hHH----HHHHcCCCeEEEccc
Q 010940 110 FEQLFDKLHPRPSCIISGKNLPW---TVN----SAIKFKIPTILFDGM 150 (497)
Q Consensus 110 l~~ll~~~~~~pDlvI~D~~~~~---~~~----~A~~lgiP~v~~~~~ 150 (497)
+.++++....+||++++|..-.. ... +...+++|+|.+.=.
T Consensus 93 ~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 93 FLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 44445555558999999995433 333 445569999885533
No 266
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=26.53 E-value=49 Score=30.22 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++|++ .|+.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~ilV--tGatG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILL--IGATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCEEE--ESTTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CEEEE--EcCCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 45766 45556554 46789999999999987644
No 267
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=26.52 E-value=42 Score=31.47 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|+..+|.|+-.+..| ..+|..|+++||+|++.-..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 345689999887777 47899999999999998643
No 268
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=26.34 E-value=1.2e+02 Score=27.38 Aligned_cols=32 Identities=16% Similarity=0.043 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++.++.| --..+|+.|+++|++|.++..
T Consensus 32 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 63 (273)
T 3uf0_A 32 RTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGR 63 (273)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 45555555442 456899999999999998873
No 269
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=26.33 E-value=54 Score=28.59 Aligned_cols=36 Identities=11% Similarity=0.052 Sum_probs=27.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
..+++..+..|+..-+..+++.|.++|++|..+-.+
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 445555666677777889999999999998877544
No 270
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=26.28 E-value=76 Score=27.13 Aligned_cols=38 Identities=21% Similarity=0.144 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+..++++..+..|+-.-...+++.|+++|+.|..+-..
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~ 68 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELY 68 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEeccc
Confidence 34577777888888888999999999999998877643
No 271
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=26.22 E-value=1.5e+02 Score=25.23 Aligned_cols=60 Identities=10% Similarity=0.078 Sum_probs=31.1
Q ss_pred cCHHHHHHHHHHHHcCCch---hHHHHHHHHHHHHHHHH----HhccCCChHHHHHHHHHHHHhhhcc
Q 010940 433 IKREKVKEAIEKLMDRGKQ---GEKRRKRARQLGEIANR----AIGVGGSSHRNIEMLIEFVIQQTRG 493 (497)
Q Consensus 433 ~~~~~l~~ai~~vl~~~~~---~~~~~~~a~~~~~~~~~----a~~~gg~~~~~~~~~~~~~~~~~~~ 493 (497)
+|+++|.++|.++++.-+. ...|+ +...+-..++. --++|...-..+++-+-.+.+-|.+
T Consensus 117 VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~l~lLGPKte 183 (187)
T 3tl4_X 117 ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEVLKLLGPKDE 183 (187)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHHHHHHCSCCG
T ss_pred eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHcCCccc
Confidence 6899999999999953010 01233 33333333332 0123455555566555555554443
No 272
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=26.20 E-value=2.3e+02 Score=21.90 Aligned_cols=36 Identities=14% Similarity=-0.083 Sum_probs=22.1
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEE
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEASSQPFIWV 322 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 322 (497)
..+|+|+.||--......+..+.+.++.....|.+.
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 349999999964333445666777775443344433
No 273
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=26.16 E-value=41 Score=31.19 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
..++|.|+-.+..|. .+|+.|+++||+|++..
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEEC
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEe
Confidence 457899997776664 68999999999999874
No 274
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=26.07 E-value=93 Score=29.48 Aligned_cols=27 Identities=30% Similarity=0.370 Sum_probs=20.5
Q ss_pred cCCccccccCCCchhH---HHHHhhCCceeec
Q 010940 364 HRAIGGFLTHCGWNST---LEGVSAGVPLVTC 392 (497)
Q Consensus 364 ~~~~~~~I~HgG~gt~---~eal~~GvP~v~i 392 (497)
+|++ +|++||.-+. .-|-..|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 3666 9999998654 5567789999863
No 275
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=26.06 E-value=3.1e+02 Score=23.82 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhh
Q 010940 306 LELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 385 (497)
Q Consensus 306 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~ 385 (497)
.++++.++..+..+++..+...- +|+.|.......-+-+ |+++ .=...|...+..|+.+
T Consensus 73 ~~~~~~l~~~~~Dliv~agy~~i--------l~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~ 131 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGFMRK--------LGKAFVSHYSGRMINI-----------HPSL--LPKYTGLNTHERALAA 131 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSCCSC--------CCHHHHHHTTTSEEEE-----------ESSS--TTTTCSSCHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEccchhh--------CCHHHHhhccCCeEEe-----------Cccc--CCCCCChhHHHHHHHc
Confidence 34667777777777777664432 5655543332211111 3332 2334588999999999
Q ss_pred CCceeecccc
Q 010940 386 GVPLVTCPLF 395 (497)
Q Consensus 386 GvP~v~iP~~ 395 (497)
|.....+-.+
T Consensus 132 G~~~tGvTvh 141 (215)
T 3tqr_A 132 GETEHGVSVH 141 (215)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9998877643
No 276
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=26.04 E-value=61 Score=29.02 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=31.4
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 8 HQLHFVLIPL--MSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 8 ~~~~il~~~~--p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
++++++.+.. ++.|=..-...||..|+ +|++|.++=....
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 4566665544 67888999999999999 9999999965543
No 277
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=25.87 E-value=37 Score=31.67 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCC-eEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGI-KVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH-~Vt~~~~ 45 (497)
+..++|.|+-.+..| ..+|+.|+++|| +|++...
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 346799999877776 478999999999 9988764
No 278
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=25.86 E-value=84 Score=26.07 Aligned_cols=28 Identities=21% Similarity=0.194 Sum_probs=23.7
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS 316 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 316 (497)
.+|+++||........+...++.|+..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999999878888888888888764
No 279
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=25.86 E-value=64 Score=26.77 Aligned_cols=28 Identities=21% Similarity=0.077 Sum_probs=22.8
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS 316 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 316 (497)
.+|+++||........+...+++|+..+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6899999998766777888888887764
No 280
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=25.82 E-value=3.2e+02 Score=25.14 Aligned_cols=110 Identities=13% Similarity=0.002 Sum_probs=59.9
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhC-CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
+.+|.+|.+. ..++.++... +..++.++..+... .+.+.++. ++. +-..++++..+++
T Consensus 6 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~~~--------~~~~~~~~---~~~---~~~~~~~l~~~~~ 64 (331)
T 4hkt_A 6 FGLLGAGRIG-------KVHAKAVSGNADARLVAVADAFPAA--------AEAIAGAY---GCE---VRTIDAIEAAADI 64 (331)
T ss_dssp EEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSSHHH--------HHHHHHHT---TCE---ECCHHHHHHCTTC
T ss_pred EEEECCCHHH-------HHHHHHHhhCCCcEEEEEECCCHHH--------HHHHHHHh---CCC---cCCHHHHhcCCCC
Confidence 6778888765 3355666655 44555444432110 02222221 232 4566778875555
Q ss_pred cccccCCC----chhHHHHHhhCCceeec-ccc--ccccchHHHHHHHHcceEEecccc
Q 010940 368 GGFLTHCG----WNSTLEGVSAGVPLVTC-PLF--AEQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 368 ~~~I~HgG----~gt~~eal~~GvP~v~i-P~~--~DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
.+++---- .--+.+|+.+|+++++= |+. .++-.-...++++.|+-+.+....
T Consensus 65 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~ 123 (331)
T 4hkt_A 65 DAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNR 123 (331)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred CEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccc
Confidence 44553222 24567889999998873 543 334333333446688877776654
No 281
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=25.73 E-value=47 Score=31.64 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|++++|+|+-.+-.| +.+|..|+++|++|+++-.
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 456789998776555 8899999999999999864
No 282
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=25.61 E-value=72 Score=28.76 Aligned_cols=33 Identities=15% Similarity=0.004 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++++++.++ |-+ -..+|+.|.++|++|..+.-.
T Consensus 6 k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 6 KVWLVTGAS-SGF--GRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455555444 433 458899999999999887643
No 283
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=25.59 E-value=2e+02 Score=26.90 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=61.2
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhC-CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
+.+|.+|.+. ...+.++.+. +..++.++..+... .+.+.++. ++. .+-...+++..+++
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~~~--------~~~~~~~~---g~~--~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 8 VAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTEDK--------REKFGKRY---NCA--GDATMEALLAREDV 67 (354)
T ss_dssp EEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSHHH--------HHHHHHHH---TCC--CCSSHHHHHHCSSC
T ss_pred EEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCHHH--------HHHHHHHc---CCC--CcCCHHHHhcCCCC
Confidence 7788888765 3456777666 44555455432210 02222222 221 24566778866554
Q ss_pred cccccCCC----chhHHHHHhhCCceeec-ccc--ccccchHHHHHHHHcceEEecccc
Q 010940 368 GGFLTHCG----WNSTLEGVSAGVPLVTC-PLF--AEQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 368 ~~~I~HgG----~gt~~eal~~GvP~v~i-P~~--~DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
.+++---- .-.+.+|+.+|+++++= |+. .++-.-...++++.|+-+.+....
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 126 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSS 126 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeech
Confidence 44543222 34567889999998873 543 344433344446688877776654
No 284
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=25.57 E-value=58 Score=30.25 Aligned_cols=35 Identities=9% Similarity=0.246 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++.++|+++ ++.|.+- ..|++.|.++||+|+.+.-
T Consensus 18 ~~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 18 GSHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TTCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 345777774 5556553 5789999999999999875
No 285
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=25.54 E-value=89 Score=26.74 Aligned_cols=38 Identities=8% Similarity=-0.063 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCccC----HHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGH----LIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GH----i~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+++|.+++... +. ..-...|++.|+++||.|.+-..+
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 458999988766 43 344677888889999998887544
No 286
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=25.44 E-value=62 Score=30.07 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+++|++ .++.|-+- ..|++.|.++||+|+.+.-
T Consensus 5 ~~~vlV--TGatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILV--TGGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEE--ecCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 456766 44555443 5789999999999998864
No 287
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=25.39 E-value=5.2e+02 Score=27.72 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=27.4
Q ss_pred cCHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhccCCC
Q 010940 433 IKREKVKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGVGGS 475 (497)
Q Consensus 433 ~~~~~l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~gg~ 475 (497)
++.+.|.+++.+++. ......+++..+....+.++.+.+-|.
T Consensus 772 ld~~~Iv~~a~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 772 MDRYALQAAALKLID-ADKYADKIDELNAFRKKAFQFAVDNGY 813 (845)
T ss_dssp CSHHHHHHHHHHHHH-TTTTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cCHHHHHHHHHHHcc-hhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 889999999998886 455555565555555555554444443
No 288
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=25.35 E-value=3.6e+02 Score=24.80 Aligned_cols=71 Identities=11% Similarity=0.069 Sum_probs=45.2
Q ss_pred hHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHH
Q 010940 304 QLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGV 383 (497)
Q Consensus 304 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal 383 (497)
.-.++++.++..+..+|+..+-..- +|+.|.+.....-+-+ |+++ .=...|.+....|+
T Consensus 169 ~~~~~~~~l~~~~~DliVlagym~I--------L~~~~l~~~~~~~INi-----------HpSl--LP~frG~~p~~~Ai 227 (302)
T 3o1l_A 169 AFAEVSRLVGHHQADVVVLARYMQI--------LPPQLCREYAHQVINI-----------HHSF--LPSFVGAKPYHQAS 227 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCCSC--------CCTTHHHHTTTCEEEE-----------ESSC--TTSSCSSCHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEHhHhhhh--------cCHHHHhhhhCCeEEe-----------Cccc--ccCCCCccHHHHHH
Confidence 3345777788888888877765433 6666554333221212 3333 33346899999999
Q ss_pred hhCCceeecccc
Q 010940 384 SAGVPLVTCPLF 395 (497)
Q Consensus 384 ~~GvP~v~iP~~ 395 (497)
.+|+....+-.+
T Consensus 228 ~~G~k~tG~TvH 239 (302)
T 3o1l_A 228 LRGVKLIGATCH 239 (302)
T ss_dssp HHTCSEEEEEEE
T ss_pred HcCCCeEEEEEE
Confidence 999998888753
No 289
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=25.31 E-value=74 Score=28.74 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
-|+++++.++.| --.++|+.|.++|++|.++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666666554 457899999999999988763
No 290
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=25.17 E-value=58 Score=27.25 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=28.8
Q ss_pred cEEEEEcCCCcc-----CHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPG-----HLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~G-----Hi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.+|+|+|. || -..+.-.|++.|.++|.+|.|..+|
T Consensus 31 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 31 HSVIITPG--YGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp SEEEEECS--BHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 47888654 33 3578899999999999999999988
No 291
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=25.12 E-value=80 Score=28.30 Aligned_cols=41 Identities=7% Similarity=0.049 Sum_probs=30.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
||||++-=-+. |---+..|+++|++.| +|+++.|...+.-+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 41 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAA 41 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 36776655444 4445788999999988 89999998776543
No 292
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=25.09 E-value=49 Score=29.98 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|||+|+-.+..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 378888776666 37899999999999998644
No 293
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=25.06 E-value=43 Score=26.35 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
..||+++-. |.+- ..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 346888654 4443 56789999999999988643
No 294
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=25.04 E-value=1.3e+02 Score=29.76 Aligned_cols=147 Identities=12% Similarity=0.012 Sum_probs=70.4
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCC
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRA 366 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 366 (497)
+.++.|..|..+ ...++.|.+.+..+.+.... +.+.+.+.....++.+..---+...|..++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~-----------~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~ 74 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT-----------FIPQFTVWANEGMLTLVEGPFDETLLDSCW 74 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS-----------CCHHHHHHHTTTSCEEEESSCCGGGGTTCS
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC-----------CCHHHHHHHhcCCEEEEECCCCccccCCcc
Confidence 447888777554 34456677788887776542 112332222223443321111223344555
Q ss_pred ccccccCCCchh-----HHHHHhhCCceee--ccccccccchHHHHHHH--HcceEEeccccccccccccccccccCHHH
Q 010940 367 IGGFLTHCGWNS-----TLEGVSAGVPLVT--CPLFAEQFYNEKLAVQV--LGIGVSVGIEAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 367 ~~~~I~HgG~gt-----~~eal~~GvP~v~--iP~~~DQ~~na~~~~~~--~G~G~~l~~~~~~~~~~~~~~~~~~~~~~ 437 (497)
+ +|.--|.-. ..+|-..|+|+-+ -|-..|...-| .+ ++ +-+|++ .+ ||.+ .-...
T Consensus 75 l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~-~~~~l~iaIs--T~---------Gksp-~la~~ 138 (457)
T 1pjq_A 75 L--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-II-DRSPLMVAVS--SG---------GTSP-VLARL 138 (457)
T ss_dssp E--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EE-EETTEEEEEE--CT---------TSCH-HHHHH
T ss_pred E--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EE-EeCCeEEEEE--CC---------CCCh-HHHHH
Confidence 5 666666543 4455667888622 22222222100 00 11 223443 11 1110 11356
Q ss_pred HHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH
Q 010940 438 VKEAIEKLMDRGKQGEKRRKRARQLGEIANRA 469 (497)
Q Consensus 438 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a 469 (497)
|++.|.+.+. +....+-+.+.++++++++.
T Consensus 139 ir~~ie~~l~--~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 139 LREKLESLLP--QHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHSC--TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcc--hhHHHHHHHHHHHHHHHHhh
Confidence 7777777774 23446666777777777654
No 295
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=25.00 E-value=3.2e+02 Score=23.73 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhh
Q 010940 306 LELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 385 (497)
Q Consensus 306 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~ 385 (497)
..+++.++..+..+++..+...- +|+.|.......-+- -|+++ .=...|...+..|+.+
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~~I--------L~~~~l~~~~~~~iN-----------iHpSL--LP~yrG~~pi~~Ai~~ 130 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFMSI--------LPEKFVTDWHHKIIN-----------IHPSL--LPSFKGLNAQEQAYKA 130 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSC--------CCHHHHHHTTTSEEE-----------EESSC--TTTTCSSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeCCceE--------eCHHHHhhccCCeEE-----------ECccc--ccCCCCccHHHHHHHc
Confidence 44667777777777777665432 666554433221111 23443 3344688999999999
Q ss_pred CCceeecccc
Q 010940 386 GVPLVTCPLF 395 (497)
Q Consensus 386 GvP~v~iP~~ 395 (497)
|.....+-.+
T Consensus 131 G~~~tGvTvh 140 (215)
T 3kcq_A 131 GVKIAGCTLH 140 (215)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9998877753
No 296
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=24.84 E-value=82 Score=28.44 Aligned_cols=33 Identities=27% Similarity=0.158 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|+++++.++.| --.++|+.|+++|++|.++.-.
T Consensus 11 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 55666665543 4578999999999999988753
No 297
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=24.81 E-value=41 Score=32.31 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.+.+|+|+-.+-.| +.+|..|+++|++|+++-..
T Consensus 4 ~~~~dVvIVGaG~aG-----l~~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 4 DNHIDVLINGCGIGG-----AMLAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp -CEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCcEEEEeCC
Confidence 345789988777655 88999999999999998643
No 298
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=24.80 E-value=97 Score=26.42 Aligned_cols=34 Identities=9% Similarity=0.186 Sum_probs=26.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 12 FVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 12 il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++..+...+-.....+++.|++.|++|.+++-
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 4555555556777888999999999999988753
No 299
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=24.76 E-value=31 Score=30.05 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|||+++-. |.+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 36777654 433 457899999999999999744
No 300
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=24.76 E-value=2.1e+02 Score=26.13 Aligned_cols=69 Identities=16% Similarity=0.149 Sum_probs=45.2
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhh
Q 010940 306 LELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 385 (497)
Q Consensus 306 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~ 385 (497)
..+++.++..+..+++..+-..- +|+.|.......-+-+ |+++ .=...|.+....|+.+
T Consensus 155 ~~~~~~l~~~~~Dlivlagym~i--------l~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai~~ 213 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYMQI--------LSDDLSAFLSGRCINI-----------HHSF--LPGFKGAKPYHQAHTR 213 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCCSC--------CCHHHHHHHTTSEEEE-----------ESSC--TTTTCSSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEhhhhhhh--------cCHHHHhhccCCeEEE-----------Cccc--ccCCCCchHHHHHHHc
Confidence 45777888878888887765433 6766655443222222 3332 3334699999999999
Q ss_pred CCceeecccc
Q 010940 386 GVPLVTCPLF 395 (497)
Q Consensus 386 GvP~v~iP~~ 395 (497)
|+....+-.+
T Consensus 214 G~k~tG~Tvh 223 (287)
T 3nrb_A 214 GVKLIGATAH 223 (287)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9998888753
No 301
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=24.69 E-value=63 Score=29.13 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++|+++ |+ |.+- -.|++.|.++||+|+.++-.
T Consensus 6 ~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSF--GH-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEE--TC-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEE--CC-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 578776 36 7665 46789999999999999754
No 302
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=24.53 E-value=2e+02 Score=27.22 Aligned_cols=39 Identities=8% Similarity=0.005 Sum_probs=32.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Q 010940 12 FVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTT 50 (497)
Q Consensus 12 il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~ 50 (497)
++++-.++.|=..=++.++..+...|..|.|+..+....
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~~ 102 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALD 102 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 466667888988999999999999999999998876443
No 303
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=24.47 E-value=86 Score=27.58 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=27.7
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 11 HFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 11 ~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
.|++... +..|=..-...|++.|+++|++|.++=
T Consensus 6 ~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 6 KFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp EEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 4444444 577899999999999999999999963
No 304
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=24.41 E-value=1.1e+02 Score=27.38 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++.++. - --.++|+.|.++|++|.++.-
T Consensus 11 k~vlVTGas~-g--IG~aia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGTK-G--IGRGIATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 4555555543 3 356889999999999988863
No 305
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=24.38 E-value=64 Score=25.31 Aligned_cols=34 Identities=21% Similarity=0.062 Sum_probs=22.7
Q ss_pred HHhhcCCCCcEEEeCCCCc--chHHHHH---HcCCCeEEEc
Q 010940 113 LFDKLHPRPSCIISGKNLP--WTVNSAI---KFKIPTILFD 148 (497)
Q Consensus 113 ll~~~~~~pDlvI~D~~~~--~~~~~A~---~lgiP~v~~~ 148 (497)
++++. +||+||.|...+ -+..+++ +.++|++.++
T Consensus 48 ~~~~~--~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 48 IARKG--QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHC--CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHhC--CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 44556 999999999764 3344444 3588876644
No 306
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=24.35 E-value=43 Score=29.78 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=23.8
Q ss_pred CCCcEEE-eCCCC-cchHHHHHHcCCCeEEEccch
Q 010940 119 PRPSCII-SGKNL-PWTVNSAIKFKIPTILFDGMG 151 (497)
Q Consensus 119 ~~pDlvI-~D~~~-~~~~~~A~~lgiP~v~~~~~~ 151 (497)
..||+|| .|+.. .-+..=|.++|||+|.++-+.
T Consensus 156 ~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 156 GLPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred cCCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 3699987 56543 345556999999999987653
No 307
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=24.29 E-value=1.3e+02 Score=26.44 Aligned_cols=22 Identities=32% Similarity=0.407 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHCCCeEEEEeCC
Q 010940 25 PMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 25 P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
--.++|++|.++|++|+++..+
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEECC
Confidence 3467899999999999998654
No 308
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=24.26 E-value=72 Score=27.04 Aligned_cols=37 Identities=14% Similarity=0.236 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMID-MARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~-LA~~L~~rGH~Vt~~~~~ 46 (497)
++||+++... .|+..-+.. +++.|.+.|++|.++--.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 3588888777 887665543 455666679999887643
No 309
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=24.25 E-value=64 Score=31.68 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=22.1
Q ss_pred CCCCCCCCCcEEEEEcC----CCccCHHHHHHHHHHHHHC--CCeEEEEeCC
Q 010940 1 MASPLPAHQLHFVLIPL----MSPGHLIPMIDMARLLAEH--GIKVTIVTTP 46 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~----p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~ 46 (497)
|+.+|+|+++||+|+-. +..|. ..++.|.+. |.+|+-+...
T Consensus 12 ~~~~m~m~~irvgiIG~g~~gG~~g~-----~~~~~l~~~~~~~~lvav~d~ 58 (438)
T 3btv_A 12 VSTVPNAAPIRVGFVGLNAAKGWAIK-----THYPAILQLSSQFQITALYSP 58 (438)
T ss_dssp -------CCEEEEEESCCTTSSSTTT-----THHHHHHHTTTTEEEEEEECS
T ss_pred cccccccCCCEEEEEcccCCCChHHH-----HHHHHHHhcCCCeEEEEEEeC
Confidence 66777778899999988 54453 234455554 6777666543
No 310
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=24.23 E-value=40 Score=31.07 Aligned_cols=30 Identities=7% Similarity=0.056 Sum_probs=24.4
Q ss_pred hhcCCccccccCCCchhHHHHHhh----CCceeecc
Q 010940 362 LSHRAIGGFLTHCGWNSTLEGVSA----GVPLVTCP 393 (497)
Q Consensus 362 L~~~~~~~~I~HgG~gt~~eal~~----GvP~v~iP 393 (497)
-..+++ +|.=||-||+.+++.. ++|++.++
T Consensus 61 ~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 61 GQQADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred ccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 334565 9999999999999743 78999997
No 311
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=24.13 E-value=64 Score=29.91 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+.++|.|+-.+..| ..+|+.|+++||+|++...
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 45799998776666 5789999999999998753
No 312
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=24.04 E-value=1e+02 Score=23.87 Aligned_cols=36 Identities=6% Similarity=-0.073 Sum_probs=26.7
Q ss_pred EEEEcCCCccCH--HHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 12 FVLIPLMSPGHL--IPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 12 il~~~~p~~GHi--~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+.++..+-+|+. .-.+.+|.++...||+|.++....
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 344455556665 667889999999999999987664
No 313
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=24.02 E-value=1.4e+02 Score=22.58 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=25.6
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 5 LPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 5 ~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
|+|++++|+++- .+-.-.-.+.+.|.+.|++|..+.
T Consensus 1 m~m~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 36 (132)
T 2rdm_A 1 MSLEAVTILLAD----DEAILLLDFESTLTDAGFLVTAVS 36 (132)
T ss_dssp -CCSSCEEEEEC----SSHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCceEEEEc----CcHHHHHHHHHHHHHcCCEEEEEC
Confidence 346788999874 345556677888888899887643
No 314
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=24.01 E-value=64 Score=28.94 Aligned_cols=33 Identities=30% Similarity=0.212 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++++++.++.| --.++|+.|.++|++|.++.-.
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 34555555433 4568999999999999988744
No 315
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=23.98 E-value=35 Score=30.77 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++++++.++ |- --.++|+.|.++|++|.++.-
T Consensus 29 k~vlVTGas-~g--IG~aia~~l~~~G~~V~~~~r 60 (260)
T 3un1_A 29 KVVVITGAS-QG--IGAGLVRAYRDRNYRVVATSR 60 (260)
T ss_dssp CEEEESSCS-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 455555544 33 346899999999999998864
No 316
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=23.91 E-value=81 Score=27.47 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|+++++.++.| --..+|+.|.++|++|.++.-.
T Consensus 3 k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 3 KVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45666655543 4568999999999999887643
No 317
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.85 E-value=1e+02 Score=27.49 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++..+.| --..+|+.|.++|++|.++.-
T Consensus 12 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 12 KVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp CEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 56666665543 357899999999999988764
No 318
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=23.83 E-value=36 Score=32.07 Aligned_cols=35 Identities=11% Similarity=-0.059 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.++|++ .|+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 8 ~~~~vlV--tGatG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFV--TGHTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TTCEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEE--ECCCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 3467777 46666664 56789999999999998743
No 319
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=23.78 E-value=60 Score=32.55 Aligned_cols=34 Identities=26% Similarity=0.301 Sum_probs=26.9
Q ss_pred HHHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEE
Q 010940 109 PFEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILF 147 (497)
Q Consensus 109 ~l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~ 147 (497)
.+++++++. +||++|... ....+|+++|||++.+
T Consensus 408 el~~~i~~~--~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKRI--KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH--CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHhc--CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 356666677 999999974 4567999999999863
No 320
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=23.78 E-value=86 Score=28.15 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=29.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
||||++-=-+. |---+..|+++|++.| +|+++.|...+.-+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 41 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSAT 41 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 36776554443 4445788999999988 89999998776544
No 321
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=23.75 E-value=1.5e+02 Score=24.26 Aligned_cols=94 Identities=13% Similarity=0.039 Sum_probs=60.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCcchhhh-hHhhhhhcCCCeeEEEeeCCCccCCCCCCCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEH--GIKVTIVTTPLNTTRFNI-TIKRAVESGLSIQLLQLEFPSVESGLPQGCEN 86 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~r--GH~Vt~~~~~~~~~~~~~-~~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~ 86 (497)
.+|+++ -.-.+=.-++.+|+.|.+. ||++ +++......++. . |+.+..+. ..+++
T Consensus 12 g~V~ls--v~D~dK~~~v~~ak~~~~ll~Gf~l--~AT~gTa~~L~e~~---------Gl~v~~v~------k~~eG--- 69 (152)
T 1b93_A 12 KHIALV--AHDHCKQMLMSWVERHQPLLEQHVL--YATGTTGNLISRAT---------GMNVNAML------SGPMG--- 69 (152)
T ss_dssp CEEEEE--ECGGGHHHHHHHHHHTHHHHTTSEE--EEETTHHHHHHHHH---------CCCCEEEC------CGGGT---
T ss_pred CEEEEE--EehhhHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHHh---------CceeEEEE------ecCCC---
Confidence 456664 3455667889999999999 9965 455555555554 3 56655552 11110
Q ss_pred CCCCCChhHHHHHHHHHHHhhHHHHHHHhhcCCCCcEEEeCCC--Cc-c-------hHHHHHHcCCCeEE
Q 010940 87 MDKLPSRDLIKNFFHAASMLKQPFEQLFDKLHPRPSCIISGKN--LP-W-------TVNSAIKFKIPTIL 146 (497)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~pDlvI~D~~--~~-~-------~~~~A~~lgiP~v~ 146 (497)
-...+.+++++. +.|+||.-.- .. . ...+|-..+||+++
T Consensus 70 -------------------G~p~I~d~I~~g--eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 70 -------------------GDQQVGALISEG--KIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp -------------------HHHHHHHHHHTT--CCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred -------------------CCchHHHHHHCC--CccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 134577888887 9999996442 21 1 23368899999987
No 322
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=23.71 E-value=82 Score=28.28 Aligned_cols=36 Identities=25% Similarity=0.225 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|.+.++++++.++.| --.++|++|.++|++|.++..
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 334566777665543 457899999999999987743
No 323
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=23.64 E-value=1.1e+02 Score=25.36 Aligned_cols=41 Identities=17% Similarity=0.077 Sum_probs=32.0
Q ss_pred EEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhh
Q 010940 13 VLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFN 53 (497)
Q Consensus 13 l~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~ 53 (497)
.++..+..=-+.+.+-||..-+.-|++|+++.+-.-...+.
T Consensus 9 II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~ 49 (160)
T 3pnx_A 9 LLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLR 49 (160)
T ss_dssp EEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGB
T ss_pred EEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhc
Confidence 44455677788999999999999999999998765444443
No 324
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=23.64 E-value=48 Score=30.75 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+.+.+|+++-.+..| +..|..|+++|++|+++-...
T Consensus 3 ~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCCC
Confidence 346788888766544 678888999999999997653
No 325
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=23.60 E-value=3.3e+02 Score=22.97 Aligned_cols=142 Identities=15% Similarity=0.152 Sum_probs=78.5
Q ss_pred eEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 288 SVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 288 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
|.|-|-+||.. +.+..++....|+.++.++=+.+-+-++ +|+.+.+ |+.+. ..-.+
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~-----------~~~~a---~~~g~ 69 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR--------TPDRMFE-----------YAKNA---EERGI 69 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHHH-----------HHHHT---TTTTC
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--------CHHHHHH-----------HHHHH---HhCCC
Confidence 47778888776 6667778888899999876665555444 4543321 11100 01112
Q ss_pred cccccCCCc----hhHHHHHhhCCceeecccccc--ccchH-HHHHHHH--cceEEe-ccccccccccccccccccCHHH
Q 010940 368 GGFLTHCGW----NSTLEGVSAGVPLVTCPLFAE--QFYNE-KLAVQVL--GIGVSV-GIEAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 368 ~~~I~HgG~----gt~~eal~~GvP~v~iP~~~D--Q~~na-~~~~~~~--G~G~~l-~~~~~~~~~~~~~~~~~~~~~~ 437 (497)
+++|.=.|. .++.-+ ..-+|+|.+|.... ....+ .-+++ . |+.+.. .... ..+..-
T Consensus 70 ~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~------------~~nAa~ 135 (183)
T 1o4v_A 70 EVIIAGAGGAAHLPGMVAS-ITHLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINN------------AKNAGI 135 (183)
T ss_dssp CEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTC------------HHHHHH
T ss_pred cEEEEecCcccccHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCC------------chHHHH
Confidence 236665553 244433 46789999997542 11122 12223 4 533221 1111 145555
Q ss_pred HHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 438 VKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 438 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
+...|. -+.| +.++++.+.+++.+++.+.+
T Consensus 136 lAaqIl-a~~d----~~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 136 LAASIL-GIKY----PEIARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHH-HTTC----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hcCC----HHHHHHHHHHHHHHHHHHHH
Confidence 555554 3455 88888888888888776555
No 326
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=23.59 E-value=1.1e+02 Score=29.58 Aligned_cols=37 Identities=5% Similarity=-0.134 Sum_probs=27.1
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
|++| |++.+|+++..+ .-...+++++++.|++|.++.
T Consensus 18 ~~~m--m~~~~I~ilGgG-----~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 18 QGHM--WNSRKVGVLGGG-----QLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp ---C--CSCCEEEEECCS-----HHHHHHHHHHHHHTCEEEEEE
T ss_pred eccC--CCCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEE
Confidence 4555 456789998765 355778889999999999987
No 327
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=23.44 E-value=94 Score=27.99 Aligned_cols=33 Identities=24% Similarity=0.204 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|+++++.++.| --..+|+.|.++|++|.++.-.
T Consensus 11 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 45666665543 4578999999999999988643
No 328
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=23.41 E-value=1.1e+02 Score=27.39 Aligned_cols=46 Identities=13% Similarity=0.174 Sum_probs=32.5
Q ss_pred CCCCCCCCC----cEEEEEcCCCccCHHHHHHHHHHH-HHCCCeEEEEeCCC
Q 010940 1 MASPLPAHQ----LHFVLIPLMSPGHLIPMIDMARLL-AEHGIKVTIVTTPL 47 (497)
Q Consensus 1 m~~~~~~~~----~~il~~~~p~~GHi~P~l~LA~~L-~~rGH~Vt~~~~~~ 47 (497)
|+..|++.+ +||+|+.++....+. +....+.| ...|++|++++...
T Consensus 11 ~~~~~~~~~~~m~~~I~ill~~gf~~~e-~~~p~dvl~~~~~~~v~~vs~~~ 61 (253)
T 3ewn_A 11 MGPDMNKVPWMGDEQIAMLVYPGMTVMD-LVGPHCMFGSLMGAKIYIVAKSL 61 (253)
T ss_dssp CCGGGTTSCCCCCCEEEEECCTTBCHHH-HHHHHHHHTTSTTCEEEEEESSS
T ss_pred hhhhcCCCCcCCCeEEEEEeCCCCcHHH-HHHHHHHHHhCCCCEEEEEeCCC
Confidence 344455556 799999998775443 45566778 45799999999764
No 329
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=23.41 E-value=98 Score=27.47 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+.++++.. .|- --..+|+.|.++|++|+++.-
T Consensus 15 k~vlVTGa-s~g--IG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 15 KVALVTAS-TDG--IGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp CEEEESSC-SSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 44555544 343 356789999999999998864
No 330
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=23.37 E-value=52 Score=30.72 Aligned_cols=35 Identities=14% Similarity=0.050 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++++|++ .|+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 18 ~~~~vlV--tGatG~iG--~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 18 GSHMILV--TGSAGRVG--RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ---CEEE--ETTTSHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEE--ECCCChHH--HHHHHHHHhCCCEEEEEeCC
Confidence 3467776 45666554 46789999999999998744
No 331
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=23.37 E-value=49 Score=31.60 Aligned_cols=40 Identities=5% Similarity=0.002 Sum_probs=29.4
Q ss_pred CCCcEEEEEcCCCccCHHHH----HHHHHHHHHCCCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPM----IDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~----l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|+++||+++..+..+--.-- ..++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 34779988888755544433 48889998899999998754
No 332
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=23.37 E-value=60 Score=28.09 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
..++|+|+-.+..| ..+|..|.++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 35789998766666 5678999999999998853
No 333
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=23.23 E-value=85 Score=28.62 Aligned_cols=31 Identities=16% Similarity=0.054 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
++++++..+.| --..+|+.|.++|++|+++.
T Consensus 10 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 45666665543 45789999999999999886
No 334
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=23.21 E-value=94 Score=27.62 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++.++.| --..+|++|.++|++|.++.-
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 55666665543 456899999999999988864
No 335
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=23.13 E-value=69 Score=29.83 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+++++|+++ ++.|-+- ..|++.|.++||+|+.+.-.
T Consensus 25 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILIT--GGAGFVG--SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEE--cCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 345677774 5556553 57889999999999998743
No 336
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=23.08 E-value=37 Score=29.70 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
|+.++|+|+-.+..| ..+|+.|.++||+|+++.
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIAN 53 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEE
Confidence 345789998766655 468999999999999844
No 337
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=23.08 E-value=90 Score=27.24 Aligned_cols=35 Identities=23% Similarity=0.175 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++.++++++ ++.|.+ -..++++|.++|++|+++.-
T Consensus 5 ~~~~~vlVT--Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 5 FSGLRALVT--GAGKGI--GRDTVKALHASGAKVVAVTR 39 (244)
T ss_dssp CTTCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEe--CCCchH--HHHHHHHHHHCCCEEEEEeC
Confidence 445566653 444544 45789999999999988764
No 338
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=23.04 E-value=77 Score=26.25 Aligned_cols=28 Identities=21% Similarity=0.077 Sum_probs=22.0
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS 316 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 316 (497)
+.|+++||........++..+..|++..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999998766677777788887653
No 339
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=22.96 E-value=29 Score=31.49 Aligned_cols=26 Identities=19% Similarity=0.274 Sum_probs=22.5
Q ss_pred cccccCCCchhHHHHHhh---CCceeecc
Q 010940 368 GGFLTHCGWNSTLEGVSA---GVPLVTCP 393 (497)
Q Consensus 368 ~~~I~HgG~gt~~eal~~---GvP~v~iP 393 (497)
+++|+=||-||+.+++.. ++|++.++
T Consensus 43 D~vv~~GGDGTll~~a~~~~~~~PilGIn 71 (258)
T 1yt5_A 43 DLIVVVGGDGTVLKAAKKAADGTPMVGFK 71 (258)
T ss_dssp SEEEEEECHHHHHHHHTTBCTTCEEEEEE
T ss_pred CEEEEEeCcHHHHHHHHHhCCCCCEEEEE
Confidence 349999999999999876 78888886
No 340
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=22.96 E-value=94 Score=28.01 Aligned_cols=41 Identities=20% Similarity=0.200 Sum_probs=30.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
||||++-=-+. |---+..|+++|++.| +|+++.|...+.-+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~ 42 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGA 42 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCc
Confidence 47887665554 5556788999998876 99999999776543
No 341
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=22.96 E-value=97 Score=28.88 Aligned_cols=38 Identities=24% Similarity=0.195 Sum_probs=32.8
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 10 LHFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 10 ~~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
.+|+|++. |+.|=..-...||..|+++|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35555544 899999999999999999999999999887
No 342
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=22.96 E-value=83 Score=28.54 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++.++.| --..+|+.|+++|++|.++.-
T Consensus 26 k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 45666655543 456899999999999988764
No 343
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=22.94 E-value=2.6e+02 Score=26.18 Aligned_cols=113 Identities=13% Similarity=0.021 Sum_probs=60.7
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhC-CCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEAS-SQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
+..|.+|.+.. ..++.++... +..++.++..+... .+.+.++. ++.. -+-..+++|..+++
T Consensus 8 igiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~~~--------~~~~a~~~--~~~~--~~~~~~~ll~~~~v 69 (359)
T 3m2t_A 8 VGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSDLER--------ARRVHRFI--SDIP--VLDNVPAMLNQVPL 69 (359)
T ss_dssp EEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSSHHH--------HGGGGGTS--CSCC--EESSHHHHHHHSCC
T ss_pred EEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCCHHH--------HHHHHHhc--CCCc--ccCCHHHHhcCCCC
Confidence 77888887652 1256667665 34555455432211 01121111 1111 23456788887766
Q ss_pred cccccCCCch----hHHHHHhhCCceeec-cccc--cccchHHHHHHHHcceEEecccc
Q 010940 368 GGFLTHCGWN----STLEGVSAGVPLVTC-PLFA--EQFYNEKLAVQVLGIGVSVGIEA 419 (497)
Q Consensus 368 ~~~I~HgG~g----t~~eal~~GvP~v~i-P~~~--DQ~~na~~~~~~~G~G~~l~~~~ 419 (497)
.+++-..-.. -+.+|+.+|+++++= |+.. ++-.-...++++.|+=+.+....
T Consensus 70 D~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~ 128 (359)
T 3m2t_A 70 DAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNF 128 (359)
T ss_dssp SEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 5566544433 367789999998863 6543 34333333446678766665543
No 344
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=22.89 E-value=69 Score=29.19 Aligned_cols=32 Identities=22% Similarity=0.133 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
..+|+++-.+..| ..+|..|+++||+|++...
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 4589998766666 4689999999999998753
No 345
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=22.88 E-value=24 Score=35.18 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=30.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchhhh
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRFNI 54 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~~~ 54 (497)
+.|||+++-.+-.| ..||+.|.+.||+|+++-.. .+.++.
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d--~~~~~~ 41 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD--GDRLRE 41 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC--HHHHHH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC--HHHHHH
Confidence 36799998877666 46999999999999999644 344443
No 346
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=22.77 E-value=4.3e+02 Score=23.93 Aligned_cols=26 Identities=15% Similarity=-0.103 Sum_probs=21.9
Q ss_pred CCHHhHHHHHHHHHhCCCCEEEEEeC
Q 010940 300 LATWQLLELGLGLEASSQPFIWVIRG 325 (497)
Q Consensus 300 ~~~~~~~~~~~al~~~~~~~i~~~~~ 325 (497)
.+.+....++++|.+.|.++|-....
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~ 48 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSF 48 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccC
Confidence 57788889999999999998887653
No 347
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=22.62 E-value=85 Score=23.99 Aligned_cols=37 Identities=8% Similarity=0.108 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccCHHHHH-HHHHHHHHCCCe-EEEEe
Q 010940 8 HQLHFVLIPLMSPGHLIPMI-DMARLLAEHGIK-VTIVT 44 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l-~LA~~L~~rGH~-Vt~~~ 44 (497)
.++||+++|..+.|.-.=.- .|-+.+.++|.+ +.+-.
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~ 55 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESAS 55 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 35789999999999888776 777888889988 65444
No 348
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=22.60 E-value=1e+02 Score=27.70 Aligned_cols=34 Identities=12% Similarity=0.057 Sum_probs=23.4
Q ss_pred EEEEEcCCC-ccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMS-PGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~-~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.++++..+ .|-+ -..+|+.|.++|++|.++.-.
T Consensus 7 k~vlVTGas~~~gI--G~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 7 KKGLIVGVANNKSI--AYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp CEEEEECCCSTTSH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEeCC
Confidence 345555544 1444 367999999999999988644
No 349
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=22.56 E-value=64 Score=29.50 Aligned_cols=37 Identities=5% Similarity=-0.046 Sum_probs=27.7
Q ss_pred cEEEEEcCCCccC---HHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGH---LIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GH---i~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
|||+++..+.... ......++++|+++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 4899998874321 234467999999999999998754
No 350
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=22.54 E-value=78 Score=26.33 Aligned_cols=28 Identities=29% Similarity=0.090 Sum_probs=22.6
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS 316 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 316 (497)
.+|+++||........+...++.|+..+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 7999999998766777787888887743
No 351
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=22.53 E-value=33 Score=32.01 Aligned_cols=30 Identities=17% Similarity=0.243 Sum_probs=23.7
Q ss_pred hcCCccccccCCCchhHHHHHhh----CCceeeccc
Q 010940 363 SHRAIGGFLTHCGWNSTLEGVSA----GVPLVTCPL 394 (497)
Q Consensus 363 ~~~~~~~~I~HgG~gt~~eal~~----GvP~v~iP~ 394 (497)
..+++ +|.-||-||+.+++.. ++|++.++.
T Consensus 74 ~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 74 DGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp --CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 34555 9999999999999754 899999874
No 352
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=22.48 E-value=81 Score=26.20 Aligned_cols=28 Identities=25% Similarity=0.131 Sum_probs=22.7
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS 316 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~ 316 (497)
.+|+++||........+...++.|+..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999998766777888888887753
No 353
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=22.43 E-value=52 Score=31.77 Aligned_cols=41 Identities=7% Similarity=-0.019 Sum_probs=29.8
Q ss_pred CCCCcEEEEEcCCCccCHHHH----HHHHHHHHHCCCeEEEEeCC
Q 010940 6 PAHQLHFVLIPLMSPGHLIPM----IDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 6 ~~~~~~il~~~~p~~GHi~P~----l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.|+++||+++..+..+=-.-- ..++++|.+.||+|+.+...
T Consensus 19 ~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 19 HMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp --CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 467889988887755544433 48888998899999998754
No 354
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=22.42 E-value=3.4e+02 Score=22.62 Aligned_cols=146 Identities=13% Similarity=0.093 Sum_probs=77.9
Q ss_pred CeEEEEeeCCCcCCCHHhHHHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCC
Q 010940 287 GSVIYACLGSICGLATWQLLELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRA 366 (497)
Q Consensus 287 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~ 366 (497)
+|.|-|-+||.. +.+..++....|+.++..+-+.+-+-++ +|+.+.+ |..+ ...-.
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--------~p~~l~~-----------~~~~---a~~~g 66 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--------TPDYMFE-----------YAET---ARERG 66 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHH-----------HHHH---TTTTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC--------CHHHHHH-----------HHHH---HHhCC
Confidence 346777778775 6667778888899999887666655444 4543321 1110 00011
Q ss_pred ccccccCCCch----hHHHHHhhCCceeecccccc-ccchHHHHH-HH--HcceEE-eccccccccccccccccccCHHH
Q 010940 367 IGGFLTHCGWN----STLEGVSAGVPLVTCPLFAE-QFYNEKLAV-QV--LGIGVS-VGIEAAVTWGLEDKSGLVIKREK 437 (497)
Q Consensus 367 ~~~~I~HgG~g----t~~eal~~GvP~v~iP~~~D-Q~~na~~~~-~~--~G~G~~-l~~~~~~~~~~~~~~~~~~~~~~ 437 (497)
++++|.=.|.. ++.-+ ..-+|+|.+|.... -......+. -+ .|+.+. +...+ .+ ..+..-
T Consensus 67 ~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~------a~----~~nAal 135 (170)
T 1xmp_A 67 LKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGK------AG----STNAGL 135 (170)
T ss_dssp CCEEEEEEESSCCHHHHHHT-TCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSH------HH----HHHHHH
T ss_pred CcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCC------cc----hHHHHH
Confidence 22366665543 33333 34789999998542 112222221 11 233321 11110 00 134444
Q ss_pred HHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHhcc
Q 010940 438 VKEAIEKLMDRGKQGEKRRKRARQLGEIANRAIGV 472 (497)
Q Consensus 438 l~~ai~~vl~~~~~~~~~~~~a~~~~~~~~~a~~~ 472 (497)
+...|. -+.| +.++++.+.+++.+++.+.+
T Consensus 136 lAaqIl-a~~d----~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 136 LAAQIL-GSFH----DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHH-HTTC----HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHH-ccCC----HHHHHHHHHHHHHHHHHHHh
Confidence 544443 3455 88999999999998876555
No 355
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=22.30 E-value=82 Score=28.64 Aligned_cols=32 Identities=25% Similarity=0.160 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++.++ |- --..+|++|.++|++|.++.-
T Consensus 17 k~vlVTGas-~g--IG~~~a~~L~~~G~~V~~~~r 48 (291)
T 3rd5_A 17 RTVVITGAN-SG--LGAVTARELARRGATVIMAVR 48 (291)
T ss_dssp CEEEEECCS-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-Ch--HHHHHHHHHHHCCCEEEEEEC
Confidence 445555444 33 347899999999999998864
No 356
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=22.20 E-value=46 Score=30.66 Aligned_cols=32 Identities=31% Similarity=0.242 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+++|.|+-.+..|. .+|+.|+++||+|++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 56899998887774 689999999999998853
No 357
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=22.19 E-value=70 Score=29.42 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
++|++ .++.|.+- ..|+++|.++||+|+.++-..
T Consensus 5 ~~ilV--tGatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 5 EKIII--YGGTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCEEE--ETTTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred cEEEE--EcCCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 45666 45666664 468899999999999988553
No 358
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=22.14 E-value=1.1e+02 Score=26.05 Aligned_cols=37 Identities=14% Similarity=0.058 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+..++++..+..|+-.-...+++.|.++|+.|..+-.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 3456666777778888899999999999999877653
No 359
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=22.10 E-value=1.3e+02 Score=26.30 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=22.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++++++.. .|- --..+|+.|.++|++|+++.-
T Consensus 7 k~vlVTGa-s~g--IG~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 7 KVIILTAA-AQG--IGQAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CEEEESST-TSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CcH--HHHHHHHHHHHCCCEEEEEEC
Confidence 34455444 343 346889999999999998863
No 360
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=22.00 E-value=1.3e+02 Score=27.18 Aligned_cols=38 Identities=13% Similarity=0.007 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCc-cCHH---HHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSP-GHLI---PMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~-GHi~---P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+++|+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 358988876432 2222 4468999999999999988765
No 361
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=21.97 E-value=60 Score=30.45 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=24.1
Q ss_pred HHHHHhhcCCCCcEEEeCCCCcchHHHHHHcCCCeEEEcc
Q 010940 110 FEQLFDKLHPRPSCIISGKNLPWTVNSAIKFKIPTILFDG 149 (497)
Q Consensus 110 l~~ll~~~~~~pDlvI~D~~~~~~~~~A~~lgiP~v~~~~ 149 (497)
++++++ . +||+||..........--+++|||++.+.+
T Consensus 109 ~E~i~a-l--~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 109 TEACVA-A--TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHH-T--CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHh-c--CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 566654 3 999999875422223335677999998653
No 362
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=21.92 E-value=1.6e+02 Score=26.56 Aligned_cols=36 Identities=14% Similarity=0.037 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++.+++++ + ++.|. --..+|+.|.++|++|+++.-.
T Consensus 24 l~~k~vlI-T-Gasgg--iG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 24 FQGKVAFI-T-GGGTG--LGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TTTCEEEE-E-TTTSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEE-E-CCCch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 34445554 3 33443 3568999999999999988643
No 363
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.75 E-value=1e+02 Score=27.74 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++..+.| --.++|+.|+++|++|.++.-
T Consensus 16 k~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 55666655543 457899999999999998863
No 364
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=21.67 E-value=98 Score=28.00 Aligned_cols=42 Identities=19% Similarity=0.236 Sum_probs=32.8
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHHCCCeEEEEeCCCCc
Q 010940 8 HQLHFVLIPL--MSPGHLIPMIDMARLLAEHGIKVTIVTTPLNT 49 (497)
Q Consensus 8 ~~~~il~~~~--p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~ 49 (497)
+++++++++. |+.|=..-...||..|+++|.+|.++-.....
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRK 123 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 3455555543 68899999999999999999999999766443
No 365
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=21.54 E-value=1.4e+02 Score=26.41 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++.++.| --.++|+.|.++|++|.++.-
T Consensus 13 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 13 RIILVTGASDG---IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 56666665542 356899999999999988763
No 366
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=21.52 E-value=1.1e+02 Score=26.69 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++++++.++ |-+ -..+|+.|.++|++|.++.-.
T Consensus 6 k~vlITGas-~gI--G~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 6 KVALVTGAS-RGI--GFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp CEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 344555444 333 468999999999999887743
No 367
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=21.47 E-value=45 Score=31.17 Aligned_cols=33 Identities=9% Similarity=0.057 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCC-CeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHG-IKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rG-H~Vt~~~~~ 46 (497)
.++|.|+-.+..| ..+|..|+++| |+|++....
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 3689999887777 77899999999 999987643
No 368
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=21.40 E-value=96 Score=27.58 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++..+.| --.++|+.|+++|++|.++.-
T Consensus 13 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 44 (256)
T 3gaf_A 13 AVAIVTGAAAG---IGRAIAGTFAKAGASVVVTDL 44 (256)
T ss_dssp CEEEECSCSSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 55666655543 456899999999999988764
No 369
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=21.40 E-value=97 Score=28.99 Aligned_cols=39 Identities=13% Similarity=0.166 Sum_probs=33.0
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 010940 10 LHFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIVTTPLN 48 (497)
Q Consensus 10 ~~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~ 48 (497)
.+|++++. ++.|=..-...||..|+++|++|.++.....
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 45655544 7899999999999999999999999988765
No 370
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.39 E-value=1.1e+02 Score=27.40 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=22.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++++++..+ |- --..+|+.|.++|++|.++.-
T Consensus 7 k~vlITGas-~g--IG~aia~~l~~~G~~V~~~~r 38 (263)
T 2a4k_A 7 KTILVTGAA-SG--IGRAALDLFAREGASLVAVDR 38 (263)
T ss_dssp CEEEEESTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 344555443 32 356799999999999998864
No 371
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=21.37 E-value=83 Score=28.27 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++..+.| --..+|+.|.++|++|.++.-
T Consensus 17 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 48 (266)
T 3p19_A 17 KLVVITGASSG---IGEAIARRFSEEGHPLLLLAR 48 (266)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 56666665542 456899999999999998863
No 372
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=21.34 E-value=88 Score=25.06 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=25.7
Q ss_pred EEE-EEcCCCccCHHH--HHHHHHHHHHCCCeEEEEeCCC
Q 010940 11 HFV-LIPLMSPGHLIP--MIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 11 ~il-~~~~p~~GHi~P--~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
|++ ++..+-+|+... .+.+|..+.+.||+|.++....
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 343 334455665444 5788999999999999988664
No 373
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=21.32 E-value=2.8e+02 Score=25.31 Aligned_cols=69 Identities=14% Similarity=0.184 Sum_probs=45.0
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhh
Q 010940 306 LELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 385 (497)
Q Consensus 306 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~ 385 (497)
..+++.++..+..+|+..+-..- +|+.|.+.....-+-+ |+++ .=...|.+....|+.+
T Consensus 156 ~~~~~~l~~~~~Dlivlagy~~i--------l~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~A~~~ 214 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARYMQI--------LSDEMSARLAGRCINI-----------HHSF--LPGFKGAKPYHQAFDR 214 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSCCSC--------CCHHHHHHTTTSEEEE-----------EEEC--SSCCCSSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEhhhhhhh--------CCHHHHhhhcCCeEEe-----------Cccc--ccCCCCchHHHHHHHc
Confidence 45778888888888887765443 6766654433221212 3332 2334699999999999
Q ss_pred CCceeecccc
Q 010940 386 GVPLVTCPLF 395 (497)
Q Consensus 386 GvP~v~iP~~ 395 (497)
|+....+-.+
T Consensus 215 G~~~~G~Tvh 224 (288)
T 3obi_A 215 GVKLIGATAH 224 (288)
T ss_dssp TCSEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9998887753
No 374
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.31 E-value=51 Score=28.76 Aligned_cols=29 Identities=21% Similarity=0.320 Sum_probs=23.3
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 12 FVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 12 il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+|+-.+-.| +.+|..|+++||+|+++=-
T Consensus 5 V~IIGaGpaG-----L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 5 IAIIGTGIAG-----LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp EEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred EEEECcCHHH-----HHHHHHHHHCCCCEEEEEC
Confidence 7777665444 8999999999999999853
No 375
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=21.30 E-value=1e+02 Score=28.28 Aligned_cols=41 Identities=10% Similarity=0.061 Sum_probs=30.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCcchh
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPLNTTRF 52 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~~~~~~ 52 (497)
||||++-=-+. +---+..|+++|++.| +|+++.|...+.-+
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~ 41 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSAT 41 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTS
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 36776655444 4445788999999988 99999998766543
No 376
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=21.28 E-value=4e+02 Score=23.02 Aligned_cols=69 Identities=14% Similarity=0.140 Sum_probs=43.7
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhh
Q 010940 306 LELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 385 (497)
Q Consensus 306 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~ 385 (497)
.++++.++..+..+++..+-..- +|+.+.......-+-+ |+++ .=...|...+..|+.+
T Consensus 71 ~~~~~~l~~~~~Dliv~agy~~I--------l~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~ 129 (211)
T 3p9x_A 71 IEVVQQLKEKQIDFVVLAGYMRL--------VGPTLLGAYEGRIVNI-----------HPSL--LPAFPGLHAIEQAIRA 129 (211)
T ss_dssp HHHHHHHHHTTCCEEEESSCCSC--------CCHHHHHHHTTSEEEE-----------ESSC--TTSSCSSCHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEeCchhh--------cCHHHHhhccCCeEEE-----------CCcc--CCCCCCccHHHHHHHc
Confidence 45777788888888877765433 6666554333222222 3333 3334588999999999
Q ss_pred CCceeecccc
Q 010940 386 GVPLVTCPLF 395 (497)
Q Consensus 386 GvP~v~iP~~ 395 (497)
|.....+-.+
T Consensus 130 G~~~tGvTvh 139 (211)
T 3p9x_A 130 NVKVTGVTIH 139 (211)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9998877753
No 377
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=21.27 E-value=1.1e+02 Score=27.35 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCc--cCHHHHHH-HHHHHHHCCCeEEEEe
Q 010940 7 AHQLHFVLIPLMSP--GHLIPMID-MARLLAEHGIKVTIVT 44 (497)
Q Consensus 7 ~~~~~il~~~~p~~--GHi~P~l~-LA~~L~~rGH~Vt~~~ 44 (497)
+.++||+++..... |...-+.. +++.|.+.|++|.++-
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~id 72 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFD 72 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEE
Confidence 45678887776544 54444444 5666777899988875
No 378
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=21.23 E-value=88 Score=28.29 Aligned_cols=33 Identities=27% Similarity=0.272 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
.|+++++.++.| --..+|+.|+++|++|.++.-
T Consensus 24 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 24 PQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp -CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 456777766653 457899999999999988764
No 379
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=21.21 E-value=92 Score=29.56 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.++|+++ ++.|.+ -..|++.|.++||+|+.+.-.
T Consensus 28 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISIT--GAGGFI--ASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEE--CCccHH--HHHHHHHHHHCCCeEEEEECC
Confidence 34677764 555644 356789999999999998744
No 380
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=21.20 E-value=1.2e+02 Score=27.15 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=23.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++..+.| --..+|+.|.++|++|.++.-
T Consensus 9 k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 9 AVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 45666665543 457899999999999988764
No 381
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=21.18 E-value=1.3e+02 Score=26.93 Aligned_cols=32 Identities=31% Similarity=0.219 Sum_probs=22.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++++++..+ |- --..+|+.|.++|++|+++.-
T Consensus 7 k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSS-NG--IGRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ch--HHHHHHHHHHHCCCEEEEEeC
Confidence 445555444 43 356789999999999998864
No 382
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.12 E-value=1.1e+02 Score=27.25 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++..+. .----.++|+.|+++|++|.+..-
T Consensus 7 K~alVTGaa~-~~GIG~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 7 KTYVIMGIAN-KRSIAFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp CEEEEECCCS-TTCHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-CchHHHHHHHHHHHCCCEEEEEEC
Confidence 4566655332 111357899999999999988864
No 383
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=21.09 E-value=4e+02 Score=22.98 Aligned_cols=34 Identities=26% Similarity=0.164 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
-|+++++..+.| --..+|+.|.++|++|.++...
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCC
Confidence 356677766654 4578999999999999886543
No 384
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=21.04 E-value=97 Score=26.63 Aligned_cols=33 Identities=6% Similarity=0.118 Sum_probs=28.2
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEE
Q 010940 11 HFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIV 43 (497)
Q Consensus 11 ~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~ 43 (497)
.|+++.. ++.|=..-.+.||..|+++|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3555554 78999999999999999999999986
No 385
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=21.00 E-value=79 Score=30.47 Aligned_cols=39 Identities=10% Similarity=0.115 Sum_probs=27.5
Q ss_pred CCCCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 010940 1 MASPLPAHQLHFVLIPLMSPGHLIPMIDMARLLAEH-GIKVTIVTTP 46 (497)
Q Consensus 1 m~~~~~~~~~~il~~~~p~~GHi~P~l~LA~~L~~r-GH~Vt~~~~~ 46 (497)
|.+| ++..+|+++-.+. .-+..|..|+++ |++|+++-..
T Consensus 1 m~~m--~~~~~v~IiGaG~-----~Gl~aA~~L~~~~g~~v~v~E~~ 40 (399)
T 1v0j_A 1 MQPM--TARFDLFVVGSGF-----FGLTIAERVATQLDKRVLVLERR 40 (399)
T ss_dssp ---C--CCSCSEEEECCSH-----HHHHHHHHHHHHSCCCEEEECSS
T ss_pred CCcc--cccCCEEEECCCH-----HHHHHHHHHHHhCCCCEEEEeCC
Confidence 5554 2357898887664 457889999999 9999998644
No 386
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=20.94 E-value=1.1e+02 Score=27.15 Aligned_cols=34 Identities=21% Similarity=0.131 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.++++.++...+ -..+|+.|.++|++|.++.-.
T Consensus 23 k~vlITGasg~GI--G~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 23 KVVLVTAAAGTGI--GSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp CEEEESSCSSSSH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCCch--HHHHHHHHHHCCCEEEEecCC
Confidence 4555555432123 368999999999999887643
No 387
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=20.93 E-value=1.3e+02 Score=26.81 Aligned_cols=32 Identities=22% Similarity=0.170 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++..+.| --.++|++|.++|++|.++.-
T Consensus 11 k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGSTAG---IGKAIATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 45666655543 346899999999999998864
No 388
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=20.89 E-value=59 Score=30.90 Aligned_cols=38 Identities=5% Similarity=-0.037 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCc-cC---HHHHHHHHHHHHHCCCeEEEEe
Q 010940 7 AHQLHFVLIPLMSP-GH---LIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 7 ~~~~~il~~~~p~~-GH---i~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
|+++||+++..+.. =| +.....++++|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 45679988855433 24 3344568899999999999874
No 389
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=20.84 E-value=69 Score=30.56 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+.++|.|+-.+..| ..+|..|.++||+|+++..
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 45799998776665 4789999999999998853
No 390
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=20.81 E-value=98 Score=28.22 Aligned_cols=31 Identities=26% Similarity=0.299 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
+++|+|+-.+..|. .+|+.|.+.||+|+++.
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEe
Confidence 57999997777764 46888999999998764
No 391
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=20.81 E-value=4.6e+02 Score=23.55 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=21.7
Q ss_pred CCcEEEeCCCCcc----hHHHHHHcCCCeEEEccc
Q 010940 120 RPSCIISGKNLPW----TVNSAIKFKIPTILFDGM 150 (497)
Q Consensus 120 ~pDlvI~D~~~~~----~~~~A~~lgiP~v~~~~~ 150 (497)
++|.||....... ....+...|||+|.+...
T Consensus 59 ~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~ 93 (330)
T 3uug_A 59 GVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRL 93 (330)
T ss_dssp TCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSC
T ss_pred CCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCC
Confidence 8999998775421 134567789999986543
No 392
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=20.76 E-value=79 Score=27.49 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++.++.| --..+|+.|.++|++|.++.-
T Consensus 2 k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 2 SLIVITGASSG---LGAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp -CEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEecCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 45566555532 446899999999999988864
No 393
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=20.72 E-value=1.1e+02 Score=27.16 Aligned_cols=36 Identities=19% Similarity=0.154 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
++.++++ ++.. .|- --..+|+.|.++|++|+++.-.
T Consensus 10 ~~~k~vl-VTGa-sgg--iG~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 10 VKGLVAV-ITGG-ASG--LGLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp CTTCEEE-EETT-TSH--HHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEE-EECC-CCh--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3344444 4443 343 3568999999999999988744
No 394
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=20.69 E-value=48 Score=30.10 Aligned_cols=45 Identities=11% Similarity=0.127 Sum_probs=38.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHH--------HHHC-CCeEEEEeCCCCcchh
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARL--------LAEH-GIKVTIVTTPLNTTRF 52 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~--------L~~r-GH~Vt~~~~~~~~~~~ 52 (497)
++.+|++.+.++-.|-....-++.. |.++ |++|.+++..--.+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 3679999999999999999999988 9999 9999999875444433
No 395
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=20.65 E-value=1.1e+02 Score=27.45 Aligned_cols=31 Identities=16% Similarity=0.181 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
|+++++.++.| --.++|++|+++|++|.++.
T Consensus 29 k~vlVTGas~g---IG~aia~~la~~G~~V~~~~ 59 (266)
T 3uxy_A 29 KVALVTGAAGG---IGGAVVTALRAAGARVAVAD 59 (266)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEECS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEe
Confidence 45666665543 45689999999999988764
No 396
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.65 E-value=1.3e+02 Score=26.58 Aligned_cols=35 Identities=11% Similarity=-0.000 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+.++++ ++.. .|- --..+|+.|.++|++|.++.-.
T Consensus 5 ~~k~vl-VTGa-s~g--IG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 5 AGKGVL-VTGG-ARG--IGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp TTCEEE-EETT-TSH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEE-EeCC-CCH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 344444 4433 343 3467899999999999988643
No 397
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=20.63 E-value=3.4e+02 Score=25.07 Aligned_cols=65 Identities=8% Similarity=0.032 Sum_probs=40.1
Q ss_pred cccchHHhhhcCCccccccCCCch----hHHHHHhhCCceeec-ccccc--ccchHHHHHHHHcce--EEeccc
Q 010940 354 GWAPQVLLLSHRAIGGFLTHCGWN----STLEGVSAGVPLVTC-PLFAE--QFYNEKLAVQVLGIG--VSVGIE 418 (497)
Q Consensus 354 ~~~pq~~lL~~~~~~~~I~HgG~g----t~~eal~~GvP~v~i-P~~~D--Q~~na~~~~~~~G~G--~~l~~~ 418 (497)
-|-..+++|..+++.+++--.-.. -+.+|+.+|+++++= |+..+ +-.-...++++.|+- +.+...
T Consensus 55 ~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~ 128 (337)
T 3ip3_A 55 KYNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFG 128 (337)
T ss_dssp ECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCG
T ss_pred ccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEeccc
Confidence 355678888876665565443333 377899999997752 76543 433333444667866 555544
No 398
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=20.58 E-value=88 Score=28.95 Aligned_cols=34 Identities=18% Similarity=0.391 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+|+|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 13 ~M~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVL--GATGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 3577774 5556553 56789999999999998754
No 399
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=20.58 E-value=1.2e+02 Score=26.96 Aligned_cols=34 Identities=12% Similarity=-0.036 Sum_probs=23.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+.++++ ++ ++.|.+ -..+++.|.++|++|+++.-
T Consensus 20 ~~k~vl-It-Gasggi--G~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 20 AGKVAL-TT-GAGRGI--GRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp TTCEEE-ET-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEE-Ee-CCCchH--HHHHHHHHHHCCCEEEEEcC
Confidence 334444 44 444433 46789999999999998764
No 400
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=20.57 E-value=1.2e+02 Score=26.85 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 10 LHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 10 ~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+|.++++..+. - --.++|++|.++|++|.++.-.
T Consensus 7 ~k~vlVTGas~-g--IG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 7 VRHALITAGTK-G--LGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEESS
T ss_pred cCEEEEeCCCc-h--hHHHHHHHHHHCCCEEEEEcCC
Confidence 45666665543 2 3468999999999999987543
No 401
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=20.57 E-value=1.2e+02 Score=23.03 Aligned_cols=36 Identities=11% Similarity=0.154 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
.|||+++|..+.|+-.=.-.|-+.+.++|.++.+-+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 478999999988888666677777888898766533
No 402
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=20.55 E-value=1.7e+02 Score=27.07 Aligned_cols=31 Identities=29% Similarity=0.165 Sum_probs=22.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
++++++..+.| --..+|++|.++|++|....
T Consensus 6 k~vlVTGas~G---IG~aia~~L~~~G~~V~~~~ 36 (324)
T 3u9l_A 6 KIILITGASSG---FGRLTAEALAGAGHRVYASM 36 (324)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEec
Confidence 45566655543 45689999999999998765
No 403
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=20.54 E-value=1.7e+02 Score=22.39 Aligned_cols=37 Identities=11% Similarity=0.130 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCccCHH-HHHHHHHHHHHCCCeEEEEe
Q 010940 8 HQLHFVLIPLMSPGHLI-PMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~-P~l~LA~~L~~rGH~Vt~~~ 44 (497)
+++||+++|..+.|.-. =.-.|-+.+.++|.++.+-.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 46789999999999977 46788888999999875544
No 404
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=20.52 E-value=1.1e+02 Score=29.28 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
.++|+++-.+. .-+..|..|.++||+|+++-..
T Consensus 3 ~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred cCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 46898886664 3578899999999999999754
No 405
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=20.49 E-value=80 Score=28.01 Aligned_cols=34 Identities=29% Similarity=0.318 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
..++|.|+-.+..| ..||+.|+++||+|++....
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 46899999766665 45799999999999988643
No 406
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=20.43 E-value=83 Score=31.58 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTP 46 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~ 46 (497)
+|+|++ .|+.|-+- ..|++.|.++||+|+.++-.
T Consensus 147 ~m~VLV--TGatG~IG--~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAI--TGSRGLVG--RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEE--ESTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEE--ECCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 578887 45566554 46899999999999998744
No 407
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=20.43 E-value=80 Score=29.75 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=23.4
Q ss_pred HHHHHhhcCCCCcEEEeCCCCc-chHHHHHHcCCCeEEEc
Q 010940 110 FEQLFDKLHPRPSCIISGKNLP-WTVNSAIKFKIPTILFD 148 (497)
Q Consensus 110 l~~ll~~~~~~pDlvI~D~~~~-~~~~~A~~lgiP~v~~~ 148 (497)
++++++- +||+||+..... -.....+++|||++.+.
T Consensus 89 ~E~Ilal---~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 89 LESLITL---QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHHHH---CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HHHHhcC---CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 5555543 999999865422 12234567899999864
No 408
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=20.42 E-value=1.2e+02 Score=25.92 Aligned_cols=31 Identities=10% Similarity=0.252 Sum_probs=22.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHH-HCCCeEEEEeCC
Q 010940 12 FVLIPLMSPGHLIPMIDMARLLA-EHGIKVTIVTTP 46 (497)
Q Consensus 12 il~~~~p~~GHi~P~l~LA~~L~-~rGH~Vt~~~~~ 46 (497)
|+++ ++.|.+ -..+++.|. ++||+|+.+.-.
T Consensus 8 vlVt--Gasg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 8 ITIL--GAAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEE--STTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEE--eCCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 5553 444444 468899999 899999998743
No 409
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.42 E-value=77 Score=28.13 Aligned_cols=36 Identities=6% Similarity=0.188 Sum_probs=24.1
Q ss_pred HHHHHhhcCCCCcEEEeCCCCc--chHHHHHHcCCCeEEEc
Q 010940 110 FEQLFDKLHPRPSCIISGKNLP--WTVNSAIKFKIPTILFD 148 (497)
Q Consensus 110 l~~ll~~~~~~pDlvI~D~~~~--~~~~~A~~lgiP~v~~~ 148 (497)
++++++ . +||+||+..... ....--++.|+|++.+.
T Consensus 52 ~E~i~~-l--~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 52 AEGILA-M--KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHHT-T--CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHc-c--CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 555553 3 999999877542 22334567899999864
No 410
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=20.41 E-value=86 Score=32.10 Aligned_cols=39 Identities=23% Similarity=0.164 Sum_probs=33.2
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 9 QLHFVLIPL-MSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 9 ~~~il~~~~-p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+.+|+|++. |+.|=..-...||..|+++|++|.++....
T Consensus 7 ~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 445655554 889999999999999999999999999886
No 411
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=20.37 E-value=76 Score=29.33 Aligned_cols=33 Identities=18% Similarity=0.162 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 8 HQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 8 ~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
..++|+|+-.+..|. .+|..|.+.||+|+++..
T Consensus 29 ~~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp CSSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 357899987776664 578889999999987753
No 412
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=20.37 E-value=1.2e+02 Score=26.83 Aligned_cols=39 Identities=21% Similarity=0.208 Sum_probs=24.8
Q ss_pred HHHHHhhcCCCCcEEEeCCCC---c----chHHHHHHcCCCeEEEc
Q 010940 110 FEQLFDKLHPRPSCIISGKNL---P----WTVNSAIKFKIPTILFD 148 (497)
Q Consensus 110 l~~ll~~~~~~pDlvI~D~~~---~----~~~~~A~~lgiP~v~~~ 148 (497)
+.+++++...+||++++|..- + -+..+.-.+++|+|-+.
T Consensus 97 ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 97 VLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 444445444589999999843 2 22334556789988754
No 413
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=20.37 E-value=4.3e+02 Score=23.07 Aligned_cols=69 Identities=14% Similarity=0.165 Sum_probs=44.2
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhh
Q 010940 306 LELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 385 (497)
Q Consensus 306 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~ 385 (497)
.++++.++..+..+++..+...- +|+.|.+.....-+-+ |+++ .=...|...+..|+.+
T Consensus 91 ~~~~~~l~~~~~Dliv~agy~~I--------L~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~ 149 (229)
T 3auf_A 91 AALAERLQAYGVDLVCLAGYMRL--------VRGPMLTAFPNRILNI-----------HPSL--LPAFPGLEAQRQALEH 149 (229)
T ss_dssp HHHHHHHHHTTCSEEEESSCCSC--------CCHHHHHHSTTCEEEE-----------ESSC--TTSSCSSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcChhHh--------CCHHHHhhccCCEEEE-----------ccCc--CcCCCCcCHHHHHHHc
Confidence 34677788888888887765443 6666654333222222 3333 3334589999999999
Q ss_pred CCceeecccc
Q 010940 386 GVPLVTCPLF 395 (497)
Q Consensus 386 GvP~v~iP~~ 395 (497)
|.....+-.+
T Consensus 150 G~~~tGvTvh 159 (229)
T 3auf_A 150 GVKVAGCTVH 159 (229)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9998887753
No 414
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=20.33 E-value=54 Score=30.17 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVT 44 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~ 44 (497)
.++|++ .++.|.+- -.|++.|.++||+|+++.
T Consensus 3 ~~~ilV--tGatG~iG--~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFI--AGHRGMVG--SAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp CEEEEE--ETTTSHHH--HHHHHHHTTCTTEEEECC
T ss_pred CCEEEE--ECCCcHHH--HHHHHHHHhCCCeEEEEe
Confidence 357776 45666664 467899999999988765
No 415
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=20.31 E-value=3.1e+02 Score=25.12 Aligned_cols=69 Identities=16% Similarity=0.121 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCccccccCCCchhHHHHHhh
Q 010940 306 LELGLGLEASSQPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAIGGFLTHCGWNSTLEGVSA 385 (497)
Q Consensus 306 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~I~HgG~gt~~eal~~ 385 (497)
.++++.++..+..+++..+-..- +|+.|.......-+-+ |+++ .=...|.+....|+.+
T Consensus 161 ~~~~~~l~~~~~Dlivla~y~~i--------l~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai~~ 219 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARYMQV--------LSPEASARLANRAINI-----------HHSF--LPGFKGAKPYHQAHAR 219 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSCCSC--------CCHHHHHHTTTSEEEE-----------EEEC--SSCCCSSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEecCchhh--------CCHHHHhhhcCCeEEe-----------CCCc--CcCCCCccHHHHHHHc
Confidence 34667777777777777665432 6666554333221112 2332 2334589999999999
Q ss_pred CCceeecccc
Q 010940 386 GVPLVTCPLF 395 (497)
Q Consensus 386 GvP~v~iP~~ 395 (497)
|+....+-.+
T Consensus 220 G~~~~G~Tvh 229 (292)
T 3lou_A 220 GVKLIGATAH 229 (292)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9998888753
No 416
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=20.29 E-value=77 Score=28.92 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+|++ .++.|.+- ..|++.|.++||+|+.+.-
T Consensus 2 ~vlV--tGatG~iG--~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 2 RIVV--TGGAGFIG--SHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp EEEE--ETTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred EEEE--ECCCChHH--HHHHHHHHhCCCEEEEEeC
Confidence 5665 45556554 4689999999999998864
No 417
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=20.28 E-value=91 Score=26.27 Aligned_cols=32 Identities=16% Similarity=0.208 Sum_probs=22.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
+|++++ .++.|-+ -..+++.|. +||+|+.+.-
T Consensus 3 kM~vlV--tGasg~i--G~~~~~~l~-~g~~V~~~~r 34 (202)
T 3d7l_A 3 AMKILL--IGASGTL--GSAVKERLE-KKAEVITAGR 34 (202)
T ss_dssp SCEEEE--ETTTSHH--HHHHHHHHT-TTSEEEEEES
T ss_pred CcEEEE--EcCCcHH--HHHHHHHHH-CCCeEEEEec
Confidence 457655 3445555 467899999 9999998763
No 418
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=20.25 E-value=1e+02 Score=24.52 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=25.6
Q ss_pred EEEEEcCCCccCHHHH-HHHHHHHHHCCCeEEEEeCCC
Q 010940 11 HFVLIPLMSPGHLIPM-IDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~-l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
+|+++-...+|+..-+ -.|++.|.++|++|.++....
T Consensus 3 ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 3 KVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp EEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred eEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 6666666667876543 346777777899999886553
No 419
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=20.25 E-value=5e+02 Score=23.74 Aligned_cols=111 Identities=9% Similarity=0.045 Sum_probs=57.3
Q ss_pred EEEEeeCCCcCCCHHhHHHHHHHHHhCC-CCEEEEEeCCCCCCCccccccchhHHHHhCCCCeEeccccchHHhhhcCCc
Q 010940 289 VIYACLGSICGLATWQLLELGLGLEASS-QPFIWVIRGGERSQGLEKWIQEEGFEERTTGRGFIIRGWAPQVLLLSHRAI 367 (497)
Q Consensus 289 ~V~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~~ 367 (497)
+.+|.+|.+. ..++.++...+ ..++.++..+.... ..+.++. ++. ..+-..++++..+++
T Consensus 8 igiiG~G~ig-------~~~~~~l~~~~~~~~~av~d~~~~~~--------~~~a~~~---~~~-~~~~~~~~ll~~~~~ 68 (329)
T 3evn_A 8 YGVVSTAKVA-------PRFIEGVRLAGNGEVVAVSSRTLESA--------QAFANKY---HLP-KAYDKLEDMLADESI 68 (329)
T ss_dssp EEEEBCCTTH-------HHHHHHHHHHCSEEEEEEECSCSSTT--------CC---CC---CCS-CEESCHHHHHTCTTC
T ss_pred EEEEechHHH-------HHHHHHHHhCCCcEEEEEEcCCHHHH--------HHHHHHc---CCC-cccCCHHHHhcCCCC
Confidence 7788999876 23455555443 34444444332211 1111110 110 123456778875555
Q ss_pred cccccCCC----chhHHHHHhhCCceeec-cccc--cccchHHHHHHHHcceEEeccc
Q 010940 368 GGFLTHCG----WNSTLEGVSAGVPLVTC-PLFA--EQFYNEKLAVQVLGIGVSVGIE 418 (497)
Q Consensus 368 ~~~I~HgG----~gt~~eal~~GvP~v~i-P~~~--DQ~~na~~~~~~~G~G~~l~~~ 418 (497)
.+++---- .-.+.+|+.+|+++++= |+.. ++-.-...++++.|+-+.+...
T Consensus 69 D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~ 126 (329)
T 3evn_A 69 DVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQK 126 (329)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEc
Confidence 54553322 23467889999998862 6543 3433333344667776666544
No 420
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=20.20 E-value=1.2e+02 Score=26.47 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=23.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 7 AHQLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 7 ~~~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
++.+++++ + ++.|-+ -..+++.|.++|++|.++.-
T Consensus 5 l~~k~vlI-T-Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 5 LAGRRVLV-T-GAGKGI--GRGTVQALHATGARVVAVSR 39 (244)
T ss_dssp CTTCEEEE-E-STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred cCCcEEEE-E-CCCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 34455555 3 333433 56789999999999988764
No 421
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=20.16 E-value=70 Score=29.07 Aligned_cols=35 Identities=31% Similarity=0.309 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCC-CeEEEEeCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHG-IKVTIVTTPL 47 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rG-H~Vt~~~~~~ 47 (497)
+++|++ .++.|.+ -..|++.|.++| |+|+.++-..
T Consensus 5 ~~~ilV--tGatG~i--G~~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 5 KKLVVV--FGGTGAQ--GGSVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp CCEEEE--ETTTSHH--HHHHHHHHHHHCSSEEEEEESCT
T ss_pred CCEEEE--ECCCchH--HHHHHHHHHhcCCceEEEEEcCC
Confidence 356666 4566655 356789999999 9999988543
No 422
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=20.11 E-value=33 Score=31.69 Aligned_cols=34 Identities=15% Similarity=-0.000 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 010940 9 QLHFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTTPL 47 (497)
Q Consensus 9 ~~~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~~~ 47 (497)
..+|+++-.+..| +..|..|+++|++|+++-...
T Consensus 7 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred cceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 4688888777655 788999999999999997653
No 423
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=20.09 E-value=1.2e+02 Score=26.80 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=22.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 010940 11 HFVLIPLMSPGHLIPMIDMARLLAEHGIKVTIVTT 45 (497)
Q Consensus 11 ~il~~~~p~~GHi~P~l~LA~~L~~rGH~Vt~~~~ 45 (497)
|+++++..+ |- --..+|+.|.++|++|+++.-
T Consensus 2 k~vlVTGas-~g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCA-TG--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 345555444 32 356899999999999988763
Done!