Your job contains 1 sequence.
>010949
MSSDERRPLRSSNQEDLESAPDSPSNRTSTPSAAGGIKDLFKQLDRRFSDRRITFKDPPL
SHSRSSSFDHHNYVDARDSLTESAPPEWALLLIGCLLGLASGLCVAFFNKGVHIIHEWAW
AGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEILNQIKQSSSLDRQGFDL
VAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNRERKIALVAAGAA
SGIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSTVLLGTQSAFT
VPSYDLKSAAELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVVCPALGGL
GAGIIALRYPGILYWGFTNVEEILHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVGG
LYAPSLMIGAAVGAVFGGSAAEIINSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSV
LLLFELTRDYRILLPLM
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010949
(497 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2020542 - symbol:CLC-F "chloride channel F" sp... 1586 6.9e-171 2
TIGR_CMR|SPO_1208 - symbol:SPO_1208 "voltage-gated chlori... 258 1.6e-19 1
TIGR_CMR|GSU_2363 - symbol:GSU_2363 "chloride channel fam... 251 1.2e-18 1
UNIPROTKB|Q9KM62 - symbol:clcA "H(+)/Cl(-) exchange trans... 210 3.0e-14 1
TIGR_CMR|VC_A0526 - symbol:VC_A0526 "conserved hypothetic... 210 3.0e-14 1
UNIPROTKB|P37019 - symbol:clcA "ClcA" species:83333 "Esch... 166 2.7e-09 1
RGD|708381 - symbol:Clcn4 "chloride channel, voltage-sens... 98 8.3e-07 3
UNIPROTKB|Q56A19 - symbol:Clcn4 "Putative chloride channe... 98 8.6e-07 3
ZFIN|ZDB-GENE-061013-353 - symbol:zgc:153764 "zgc:153764"... 109 9.2e-07 3
MGI|MGI:104571 - symbol:Clcn4-2 "chloride channel 4-2" sp... 98 1.7e-06 3
UNIPROTKB|F1NGF2 - symbol:CLCN4 "Uncharacterized protein"... 103 3.3e-06 2
ZFIN|ZDB-GENE-030131-1699 - symbol:clcn3 "chloride channe... 94 3.8e-06 3
UNIPROTKB|Q4F894 - symbol:CLCN4 "Uncharacterized protein"... 100 4.2e-06 3
FB|FBgn0036566 - symbol:ClC-c "Chloride channel-c" specie... 107 4.3e-06 4
UNIPROTKB|E1C9F7 - symbol:CLCN3 "Uncharacterized protein"... 88 5.3e-06 3
UNIPROTKB|P51793 - symbol:CLCN4 "H(+)/Cl(-) exchange tran... 99 5.3e-06 3
UNIPROTKB|E1C9F3 - symbol:CLCN3 "Uncharacterized protein"... 88 6.4e-06 3
TIGR_CMR|SO_1302 - symbol:SO_1302 "chloride channel" spec... 121 6.8e-06 2
UNIPROTKB|F1PWQ5 - symbol:CLCN4 "Uncharacterized protein"... 98 6.9e-06 3
UNIPROTKB|E9PE15 - symbol:CLCN3 "H(+)/Cl(-) exchange tran... 88 7.1e-06 3
UNIPROTKB|Q9R279 - symbol:CLCN3 "H(+)/Cl(-) exchange tran... 88 8.3e-06 3
UNIPROTKB|B7Z5Z4 - symbol:CLCN4 "cDNA FLJ50190, highly si... 99 8.7e-06 2
UNIPROTKB|B9EGJ9 - symbol:CLCN3 "CLCN3 protein" species:9... 88 9.9e-06 3
UNIPROTKB|E2R876 - symbol:CLCN3 "Uncharacterized protein"... 88 1.1e-05 3
UNIPROTKB|P51790 - symbol:CLCN3 "H(+)/Cl(-) exchange tran... 88 1.1e-05 3
UNIPROTKB|O18894 - symbol:CLCN3 "H(+)/Cl(-) exchange tran... 88 1.1e-05 3
MGI|MGI:103555 - symbol:Clcn3 "chloride channel 3" specie... 88 1.1e-05 3
RGD|621219 - symbol:Clcn3 "chloride channel, voltage-sens... 88 1.1e-05 3
UNIPROTKB|Q4LAL8 - symbol:clcn3 "Chloride channel 3" spec... 88 1.1e-05 3
UNIPROTKB|D4A487 - symbol:Clcn3 "H(+)/Cl(-) exchange tran... 88 1.1e-05 3
UNIPROTKB|Q5RDJ7 - symbol:CLCN3 "H(+)/Cl(-) exchange tran... 88 1.2e-05 3
WB|WBGene00000531 - symbol:clh-4 species:6239 "Caenorhabd... 102 1.3e-05 2
UNIPROTKB|D4A7Q0 - symbol:Clcn3 "H(+)/Cl(-) exchange tran... 88 1.3e-05 3
UNIPROTKB|F1N299 - symbol:CLCN3 "Uncharacterized protein"... 88 1.6e-05 3
UNIPROTKB|F1RIY2 - symbol:CLCN3 "Uncharacterized protein"... 88 1.8e-05 3
UNIPROTKB|G3XAG5 - symbol:CLCN4 "H(+)/Cl(-) exchange tran... 99 1.8e-05 3
UNIPROTKB|D3ZZS0 - symbol:Clcn4-2 "Protein Clcn4-2" speci... 98 2.2e-05 3
UNIPROTKB|B4F6X6 - symbol:clcn3 "Putative uncharacterized... 89 3.3e-05 3
SGD|S000003801 - symbol:GEF1 "Voltage-gated chloride chan... 117 4.0e-05 2
ZFIN|ZDB-GENE-110407-11 - symbol:clcn5 "chloride channel ... 99 9.0e-05 2
UNIPROTKB|Q9TTU3 - symbol:CLCN5 "H(+)/Cl(-) exchange tran... 99 9.4e-05 2
MGI|MGI:99486 - symbol:Clcn5 "chloride channel 5" species... 99 9.4e-05 2
RGD|2362 - symbol:Clcn5 "chloride channel, voltage-sensit... 99 9.4e-05 2
UNIPROTKB|P51796 - symbol:Clcn5 "H(+)/Cl(-) exchange tran... 99 9.4e-05 2
UNIPROTKB|Q9GKE7 - symbol:CLCN5 "H(+)/Cl(-) exchange tran... 99 0.00012 2
UNIPROTKB|P76175 - symbol:clcB "chloride ion transporter ... 95 0.00012 2
UNIPROTKB|F1PZE9 - symbol:CLCN5 "Uncharacterized protein"... 99 0.00015 2
UNIPROTKB|F1MN45 - symbol:CLCN5 "Uncharacterized protein"... 99 0.00015 2
UNIPROTKB|P51795 - symbol:CLCN5 "H(+)/Cl(-) exchange tran... 98 0.00015 2
ZFIN|ZDB-GENE-091113-15 - symbol:si:dkey-22f5.8 "si:dkey-... 88 0.00064 4
>TAIR|locus:2020542 [details] [associations]
symbol:CLC-F "chloride channel F" species:3702
"Arabidopsis thaliana" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005247 "voltage-gated chloride channel activity"
evidence=IEA;ISS] [GO:0006821 "chloride transport"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;ISS]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PROSITE:PS51371 SMART:SM00116 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0009507 GO:GO:0034707
EMBL:AC002328 eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 EMBL:AJ303348 EMBL:AF366368 EMBL:AY080722
IPI:IPI00517132 IPI:IPI00521141 RefSeq:NP_564698.1
RefSeq:NP_849813.1 UniGene:At.10363 ProteinModelPortal:Q8RXR2
SMR:Q8RXR2 STRING:Q8RXR2 PaxDb:Q8RXR2 PRIDE:Q8RXR2
EnsemblPlants:AT1G55620.2 GeneID:842011 KEGG:ath:AT1G55620
GeneFarm:2843 TAIR:At1g55620 HOGENOM:HOG000238204 InParanoid:Q8RXR2
OMA:LICMWLP PhylomeDB:Q8RXR2 ProtClustDB:CLSN2917298
Genevestigator:Q8RXR2 GermOnline:AT1G55620 Uniprot:Q8RXR2
Length = 781
Score = 1586 (563.4 bits), Expect = 6.9e-171, Sum P(2) = 6.9e-171
Identities = 311/436 (71%), Positives = 333/436 (76%)
Query: 62 HSRSSSFDHHNYVDARDSLTESAPPEWXXXXXXXXXXXXXXXXVAFFNKGVHIIHEWAWA 121
HS D + + + + L +SAPPEW VA FNKGVH+IHEWAWA
Sbjct: 105 HSVDDRNDEYGFDE--EVLGDSAPPEWALLLIGCLIGVAAGICVAGFNKGVHVIHEWAWA 162
Query: 122 GTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEILNQIKQSSSLDRQGFDLV 181
GTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEIL+QI+QS+S RQG D +
Sbjct: 163 GTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEILDQIRQSNSSQRQGLDFL 222
Query: 182 AGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNRERKIXXXXXXXXX 241
AG++P IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGF+LMMENNRER+I
Sbjct: 223 AGIYPVIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFALMMENNRERRIALTAAGAAS 282
Query: 242 XXXXXXXXXVAGCFFAIETVLRPLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
VAGCFFAIETVLRPLRAENSPPFTTAM AFTV
Sbjct: 283 GIASGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNALLGTQSAFTV 342
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVVCPXXXXXX 361
PSYDLKSAAELPLYLILGMLCG VSVVF+RLV WFTKSFDFIK+KFGLP +VCP
Sbjct: 343 PSYDLKSAAELPLYLILGMLCGAVSVVFSRLVTWFTKSFDFIKDKFGLPAIVCPALGGLG 402
Query: 362 XXXXXXRYPGILYWGFTNVEEILHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVGGL 421
+YPGILYWGFTNVEEILHTGK+ASAPGIWLL QLAAAKVVATALCKGSGLVGGL
Sbjct: 403 AGIIALKYPGILYWGFTNVEEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGL 462
Query: 422 YAPSLMIXXXXXXXXXXXXXEIINSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVL 481
YAPSLMI EIIN AIPGN AVA+PQAYALVGMAATLAS+CSVPLTSVL
Sbjct: 463 YAPSLMIGAAVGAVFGGSAAEIINRAIPGNAAVAQPQAYALVGMAATLASMCSVPLTSVL 522
Query: 482 LLFELTRDYRILLPLM 497
LLFELT+DYRILLPLM
Sbjct: 523 LLFELTKDYRILLPLM 538
Score = 97 (39.2 bits), Expect = 6.9e-171, Sum P(2) = 6.9e-171
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 3 SDERRPLRSSNQEDL-----ESAPDSPSNRTSTPSAAGGIKDLFKQLDRRFS--DRRITF 55
+++R LRS++ +++ E D S + S AGG++DLFK +DRRFS RR++F
Sbjct: 10 NEDRHLLRSTDGDEVGIGGGEGDLDVESQSPAIRSGAGGVRDLFKHIDRRFSLSGRRLSF 69
Query: 56 K 56
K
Sbjct: 70 K 70
>TIGR_CMR|SPO_1208 [details] [associations]
symbol:SPO_1208 "voltage-gated chloride channel family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005247
"voltage-gated chloride channel activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001807 InterPro:IPR014743 Pfam:PF00654 PRINTS:PR00762
GO:GO:0005886 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 RefSeq:YP_166455.1
ProteinModelPortal:Q5LU50 GeneID:3192751 KEGG:sil:SPO1208
PATRIC:23375727 HOGENOM:HOG000252021 OMA:SEGHYAG
ProtClustDB:CLSK933469 Uniprot:Q5LU50
Length = 581
Score = 258 (95.9 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 95/396 (23%), Positives = 159/396 (40%)
Query: 108 FNKGVHIIHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGM-MH-----GLL 161
F KG++ + + NE L W +LLIP GG++VG+ +H G +
Sbjct: 75 FRKGINALQSVLYG---NEDVRLLHSHAEHLPWFWLLLIPTLGGLVVGLILHKTTPDGRV 131
Query: 162 EILNQIKQSSSLDRQGFDLVAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFS 221
+ + + ++L ++ AG+ + ++ +TL +G S G EGP V + +
Sbjct: 132 RSVADVIEGAALTDGRVEMRAGIGSMLASL---ITLSSGGSTGREGPVVHLAGVISTWVC 188
Query: 222 LMMENNRERKIXXXXXXXXXXXXXXXXXXVAGCFFAIETVLRPLRAENSPPFTTAMXXXX 281
+ + +AG FA+E VLR P A
Sbjct: 189 RRINADGITGRDLLGCAVAAAVSASFNAPIAGALFALEVVLRHFAVHAFAPIVIA---SV 245
Query: 282 XXXXXXXXXXXXXXXXAFTVPSYDLKSAAELPLYLILGMLCGVVSVVFTRLVAWFTKSFD 341
A P L+ ELP +L+LG++CG+VS++ R +
Sbjct: 246 AGTVINRLDRGDVTEFALNTPGA-LQFYVELPAFLLLGLVCGLVSLLLMRSIFLAEDLGT 304
Query: 342 FIKEKFGLPPVVCPXXXXXXXXXXXXRYPGILYWGFTNVEEILHTGKTASAPGIWLLTQL 401
++ +P + P +P I+ G+ L +G+ A I
Sbjct: 305 HVQNSLRMPRWLRPAVSGALLGLLAIWFPHIIGVGYETTILAL-SGELALGTAILF---- 359
Query: 402 AAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEIINSAIPGNVAVAEPQAYA 461
A K VA AL G + GG+++PSLMI ++ + G A+ YA
Sbjct: 360 AVIKTVALALTMGGRMGGGVFSPSLMIGALTGLAFGLIATRVLPD-VSGTHAL-----YA 413
Query: 462 LVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
GM A A+V P+++ L++FELT D++I L +M
Sbjct: 414 FAGMGAVAAAVLGAPISTTLIVFELTGDWQIGLAVM 449
>TIGR_CMR|GSU_2363 [details] [associations]
symbol:GSU_2363 "chloride channel family protein,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0005247
"voltage-gated chloride channel activity" evidence=ISS] [GO:0006821
"chloride transport" evidence=ISS] InterPro:IPR000644
InterPro:IPR001807 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PROSITE:PS51371 SMART:SM00116 GO:GO:0016020
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 KO:K03281 RefSeq:NP_953410.1
ProteinModelPortal:Q74AJ1 GeneID:2688171 KEGG:gsu:GSU2363
PATRIC:22027575 HOGENOM:HOG000230178 OMA:CHYLTER
ProtClustDB:CLSK743278 BioCyc:GSUL243231:GH27-2365-MONOMER
Uniprot:Q74AJ1
Length = 614
Score = 251 (93.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 70/201 (34%), Positives = 98/201 (48%)
Query: 298 AFTVPSYDLKSAAELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVVCPXX 357
AF VP+Y L EL Y +LG++CG ++ +F + + K+ D + + P+ P
Sbjct: 254 AFDVPAYQLVHPLELAFYALLGVVCGCLAALF---ITGYGKTRDMFS-RLPINPLWKPLL 309
Query: 358 XXXXXXXXXXRYPGILYWGFTNVEEILHTGKTASAPGIWLL-TQLAAAKVVATALCKGSG 416
P + G+ +E K S WLL T L K+VAT + GSG
Sbjct: 310 GGFLVGCVAVLLPQVQGNGYEFIE------KAVSNDVGWLLVTLLIVGKMVATCVTVGSG 363
Query: 417 LVGGLYAPSLMIXXXXXXXXXXXXXEIINSAIPGNVAVAEPQAYALVGMAATLASVCSVP 476
L GG +APSL I + NS P A P AYALVGM A LASV P
Sbjct: 364 LPGGTFAPSLFIGSVTGMSFGF----LANSLFPYQTAT--PGAYALVGMGAFLASVTHAP 417
Query: 477 LTSVLLLFELTRDYRILLPLM 497
+T + LLFE+T Y++++P+M
Sbjct: 418 MTGIFLLFEMTGSYKVIVPIM 438
Score = 197 (74.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 73/275 (26%), Positives = 110/275 (40%)
Query: 189 KAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNRERKIXXXXXXXXXXXXXXXX 248
+ I +A+T+G+G S G EGP IG + + ++ + ER
Sbjct: 149 RGISSALTIGSGGSAGQEGPIAQIGGTAGSVVGHLLGMSGERLKVLIGCGVSGGVAATFN 208
Query: 249 XXVAGCFFAIETVLRPLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTVPSYDLKS 308
+AG FFA E VL L + FT+ + AF VP+Y L
Sbjct: 209 APLAGVFFAHEIVL--LSSFELSSFTSIVISSGMATVVSRAMYGDIP--AFDVPAYQLVH 264
Query: 309 AAELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVVCPXXXXXXXXXXXXR 368
EL Y +LG++CG ++ +F + + K+ D + + P+ P
Sbjct: 265 PLELAFYALLGVVCGCLAALF---ITGYGKTRDMFS-RLPINPLWKPLLGGFLVGCVAVL 320
Query: 369 YPGILYWGFTNVEEILHTGKTASAPGIWLL-TQLAAAKVVATALCKGSGLVGGLYAPSLM 427
P + G+ +E K S WLL T L K+VAT + GSGL GG +APSL
Sbjct: 321 LPQVQGNGYEFIE------KAVSNDVGWLLVTLLIVGKMVATCVTVGSGLPGGTFAPSLF 374
Query: 428 IXXXXXXXXXXXXXEII--NSAIPGNVAVAEPQAY 460
I + +A PG A+ A+
Sbjct: 375 IGSVTGMSFGFLANSLFPYQTATPGAYALVGMGAF 409
>UNIPROTKB|Q9KM62 [details] [associations]
symbol:clcA "H(+)/Cl(-) exchange transporter ClcA"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01128 InterPro:IPR001807 InterPro:IPR014743
InterPro:IPR023861 Pfam:PF00654 PRINTS:PR00762 GO:GO:0005887
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0015297
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
KO:K03281 OMA:AASEMFR ProtClustDB:PRK05277 PIR:C82449
RefSeq:NP_232917.1 ProteinModelPortal:Q9KM62 SMR:Q9KM62
DNASU:2612726 GeneID:2612726 KEGG:vch:VCA0526 PATRIC:20085600
Uniprot:Q9KM62
Length = 468
Score = 210 (79.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 83/319 (26%), Positives = 125/319 (39%)
Query: 184 VFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFS-LMMENNRERKIXXXXXXXXXX 242
V P +K LG+G LG EGP+V +G + S + N + +
Sbjct: 125 VLP-VKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGG 183
Query: 243 XXXXXXXXVAGCFFAIETVLRPLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTVP 302
+AG F IE +RP + T+P
Sbjct: 184 LAAAFNAPLAGIMFVIEE-MRPQFRYTL--ISVRAVIISAVAANIVFRVINGQDAVITMP 240
Query: 303 SYDLKSAAELPLYLILGMLCGVVSVVFTRLVAWFTKSFD-FIK-EKFGLPPVVCPXXXXX 360
YD + L L+L+LG L GV V+F L+ T + D F+K + +
Sbjct: 241 QYDAPELSTLGLFLLLGALFGVFGVLFNYLI---TLAQDLFVKFHRNDRKRYLLTGSMIG 297
Query: 361 XXXXXXXRY-PGILYWGFTNVEEILHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVG 419
Y P + G + + I + G A GI LL L ++ T LC GSG G
Sbjct: 298 GCFGLLLLYVPELTGGGISLIPTITNGGYGA---GILLL--LFVGRIFTTLLCFGSGAPG 352
Query: 420 GLYAPSLMIXXXXXXXXXXXXXEIINSAIPG-NVAVAEPQAYALVGMAATLASVCSVPLT 478
G++AP L + I P N+ EP +A+ GM A A+ P+T
Sbjct: 353 GIFAPMLALGTLFGYAFGL----IAKMWFPELNI---EPGMFAIAGMGALFAATVRAPIT 405
Query: 479 SVLLLFELTRDYRILLPLM 497
+LL+ E+T +Y ++LPL+
Sbjct: 406 GILLVIEMTNNYHLILPLI 424
>TIGR_CMR|VC_A0526 [details] [associations]
symbol:VC_A0526 "conserved hypothetical protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_01128 InterPro:IPR001807 InterPro:IPR014743
InterPro:IPR023861 Pfam:PF00654 PRINTS:PR00762 GO:GO:0005887
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0015297
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
KO:K03281 OMA:AASEMFR ProtClustDB:PRK05277 PIR:C82449
RefSeq:NP_232917.1 ProteinModelPortal:Q9KM62 SMR:Q9KM62
DNASU:2612726 GeneID:2612726 KEGG:vch:VCA0526 PATRIC:20085600
Uniprot:Q9KM62
Length = 468
Score = 210 (79.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 83/319 (26%), Positives = 125/319 (39%)
Query: 184 VFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFS-LMMENNRERKIXXXXXXXXXX 242
V P +K LG+G LG EGP+V +G + S + N + +
Sbjct: 125 VLP-VKFFGGMGALGSGMVLGREGPTVQMGGAVGRMISDIFRVKNEDTRHSLLAAGAAGG 183
Query: 243 XXXXXXXXVAGCFFAIETVLRPLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTVP 302
+AG F IE +RP + T+P
Sbjct: 184 LAAAFNAPLAGIMFVIEE-MRPQFRYTL--ISVRAVIISAVAANIVFRVINGQDAVITMP 240
Query: 303 SYDLKSAAELPLYLILGMLCGVVSVVFTRLVAWFTKSFD-FIK-EKFGLPPVVCPXXXXX 360
YD + L L+L+LG L GV V+F L+ T + D F+K + +
Sbjct: 241 QYDAPELSTLGLFLLLGALFGVFGVLFNYLI---TLAQDLFVKFHRNDRKRYLLTGSMIG 297
Query: 361 XXXXXXXRY-PGILYWGFTNVEEILHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVG 419
Y P + G + + I + G A GI LL L ++ T LC GSG G
Sbjct: 298 GCFGLLLLYVPELTGGGISLIPTITNGGYGA---GILLL--LFVGRIFTTLLCFGSGAPG 352
Query: 420 GLYAPSLMIXXXXXXXXXXXXXEIINSAIPG-NVAVAEPQAYALVGMAATLASVCSVPLT 478
G++AP L + I P N+ EP +A+ GM A A+ P+T
Sbjct: 353 GIFAPMLALGTLFGYAFGL----IAKMWFPELNI---EPGMFAIAGMGALFAATVRAPIT 405
Query: 479 SVLLLFELTRDYRILLPLM 497
+LL+ E+T +Y ++LPL+
Sbjct: 406 GILLVIEMTNNYHLILPLI 424
>UNIPROTKB|P37019 [details] [associations]
symbol:clcA "ClcA" species:83333 "Escherichia coli K-12"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0015108
"chloride transmembrane transporter activity" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0015706
"nitrate transport" evidence=IDA] [GO:0015299 "solute:hydrogen
antiporter activity" evidence=IDA] [GO:0043168 "anion binding"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IEA;IDA] [GO:0031404 "chloride ion binding" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA;IDA] HAMAP:MF_01128
InterPro:IPR001807 InterPro:IPR014743 InterPro:IPR023861
Pfam:PF00654 PRINTS:PR00762 GO:GO:0005887 GO:GO:0006950 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U70214 GO:GO:0031404 GO:GO:0006821 GO:GO:0015299
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
PIR:C64739 RefSeq:NP_414697.1 RefSeq:YP_488458.1 PDB:1KPK PDB:1OTS
PDB:1OTT PDB:1OTU PDB:2EXW PDB:2EXY PDB:2EZ0 PDB:2FEC PDB:2FED
PDB:2FEE PDB:2H2P PDB:2H2S PDB:2HLF PDB:2HT2 PDB:2HT3 PDB:2HT4
PDB:2HTK PDB:2HTL PDB:2R9H PDB:3DET PDB:3EJY PDB:3EJZ PDB:3NMO
PDB:4ENE PDB:4FTP PDBsum:1KPK PDBsum:1OTS PDBsum:1OTT PDBsum:1OTU
PDBsum:2EXW PDBsum:2EXY PDBsum:2EZ0 PDBsum:2FEC PDBsum:2FED
PDBsum:2FEE PDBsum:2H2P PDBsum:2H2S PDBsum:2HLF PDBsum:2HT2
PDBsum:2HT3 PDBsum:2HT4 PDBsum:2HTK PDBsum:2HTL PDBsum:2R9H
PDBsum:3DET PDBsum:3EJY PDBsum:3EJZ PDBsum:3NMO PDBsum:4ENE
PDBsum:4FTP ProteinModelPortal:P37019 SMR:P37019 DIP:DIP-9523N
TCDB:2.A.49.5.1 EnsemblBacteria:EBESCT00000004618
EnsemblBacteria:EBESCT00000016464 GeneID:12930374 GeneID:946715
KEGG:ecj:Y75_p0152 KEGG:eco:b0155 PATRIC:32115419 EchoBASE:EB2235
EcoGene:EG12331 HOGENOM:HOG000257546 KO:K03281 OMA:AASEMFR
ProtClustDB:PRK05277 BioCyc:EcoCyc:YADQ-MONOMER
BioCyc:ECOL316407:JW5012-MONOMER EvolutionaryTrace:P37019
Genevestigator:P37019 GO:GO:0015706 Uniprot:P37019
Length = 473
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 75/323 (23%), Positives = 115/323 (35%)
Query: 184 VFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANG-FSLMMENNRERKIXXXXXXXXXX 242
V P +K TLG G LG EGP+V IG + + E +
Sbjct: 127 VLP-VKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAG 185
Query: 243 XXXXXXXXVAGCFFAIETVLRPLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTVP 302
+AG F IE E P F + V
Sbjct: 186 LAAAFNAPLAGILFIIE--------EMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVA 237
Query: 303 SYDLKSAAELPL-----YLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFG---LPPVVC 354
D+ ++ PL YLILG++ G+ +F + W D + G V+
Sbjct: 238 LIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNK---WVLGMQDLLHRVHGGNITKWVLM 294
Query: 355 PXXXXXXXXXXXXRYPGILYWGFTNVEEILHTGKTASAPGIWLLTQLAAAKVVATALCKG 414
P GF N+ I G + +L + A+V+ T LC
Sbjct: 295 GGAIGGLCGLLGFVAPATSGGGF-NLIPIATAGNFSMG----MLVFIFVARVITTLLCFS 349
Query: 415 SGLVGGLYAPSLMIXXXXXXXXXXXXXEIINSAIPGNVAVAEPQAYALVGMAATLASVCS 474
SG GG++AP L + E+ E +A+ GM A LA+
Sbjct: 350 SGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYH------LEAGTFAIAGMGALLAASIR 403
Query: 475 VPLTSVLLLFELTRDYRILLPLM 497
PLT ++L+ E+T +Y+++LP++
Sbjct: 404 APLTGIILVLEMTDNYQLILPMI 426
>RGD|708381 [details] [associations]
symbol:Clcn4 "chloride channel, voltage-sensitive 4"
species:10116 "Rattus norvegicus" [GO:0005247 "voltage-gated
chloride channel activity" evidence=IEA] [GO:0005254 "chloride
channel activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006821 "chloride transport" evidence=ISO]
[GO:0015297 "antiporter activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0031902 "late endosome membrane"
evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002246 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116
RGD:708381 GO:GO:0016021 GO:GO:0005524 GO:GO:0031901 GO:GO:0031902
GO:GO:0015297 eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 HOVERGEN:HBG050984 OrthoDB:EOG4XD3QH EMBL:Z36944
IPI:IPI00205423 PIR:S47327 UniGene:Rn.44406
ProteinModelPortal:P51794 SMR:P51794 STRING:P51794 PRIDE:P51794
InParanoid:P51794 ArrayExpress:P51794 Genevestigator:P51794
GermOnline:ENSRNOG00000003533 Uniprot:P51794
Length = 747
Score = 98 (39.6 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
+W L K+V T G + GL+ PS+ + ++
Sbjct: 429 MWQLALALIFKIVITIFTFGMKIPSGLFIPSMAVGAMAGRMVGIGVEQLAYHHHDWIIFR 488
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 489 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 540
Score = 93 (37.8 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 36/155 (23%), Positives = 56/155 (36%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 193 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 252
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 253 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHT 312
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ VFTR +AW
Sbjct: 313 PWY----MAELFPFILLGVFGGLWGTVFTRCNIAW 343
Score = 44 (20.5 bits), Expect = 8.3e-07, Sum P(3) = 8.3e-07
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 45 WEFIKSLLDAWSGWVVMLLIGLLAGTLAGVIDLAVDWMTDLKEGVCL 91
>UNIPROTKB|Q56A19 [details] [associations]
symbol:Clcn4 "Putative chloride channel 4-2" species:10116
"Rattus norvegicus" [GO:0005247 "voltage-gated chloride channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002246 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116
RGD:708381 GO:GO:0016021 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493
HOVERGEN:HBG050984 CTD:1183 KO:K05013 OMA:VITESGM IPI:IPI00205423
UniGene:Rn.44406 EMBL:CH474014 EMBL:BC092209 RefSeq:NP_071534.2
SMR:Q56A19 STRING:Q56A19 Ensembl:ENSRNOT00000059270 GeneID:60586
KEGG:rno:60586 InParanoid:Q56A19 NextBio:612318
Genevestigator:Q56A19 Uniprot:Q56A19
Length = 754
Score = 98 (39.6 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
+W L K+V T G + GL+ PS+ + ++
Sbjct: 436 MWQLALALIFKIVITIFTFGMKIPSGLFIPSMAVGAMAGRMVGIGVEQLAYHHHDWIIFR 495
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 496 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 547
Score = 93 (37.8 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 36/155 (23%), Positives = 56/155 (36%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 200 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 259
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 260 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHT 319
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ VFTR +AW
Sbjct: 320 PWY----MAELFPFILLGVFGGLWGTVFTRCNIAW 350
Score = 44 (20.5 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 52 WEFIKSLLDAWSGWVVMLLIGLLAGTLAGVIDLAVDWMTDLKEGVCL 98
>ZFIN|ZDB-GENE-061013-353 [details] [associations]
symbol:zgc:153764 "zgc:153764" species:7955 "Danio
rerio" [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002246
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116
ZFIN:ZDB-GENE-061013-353 GO:GO:0016021 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 HOGENOM:HOG000164493
HOVERGEN:HBG050984 KO:K05013 EMBL:BC124729 IPI:IPI00503359
RefSeq:NP_001070786.1 UniGene:Dr.52663 ProteinModelPortal:Q08BG8
SMR:Q08BG8 GeneID:768175 KEGG:dre:768175 NextBio:20918490
ArrayExpress:Q08BG8 Uniprot:Q08BG8
Length = 768
Score = 109 (43.4 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 34/113 (30%), Positives = 51/113 (45%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE--------II-- 444
+W LT A K++ T G + GL+ PS+ + + II
Sbjct: 451 LWQLTLALAFKIIITIFTFGMKIPSGLFIPSMAVGAIAGRIVGIAVEQMAYHHHDWIIFK 510
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 511 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 562
Score = 81 (33.6 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 35/155 (22%), Positives = 56/155 (36%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGF-SLMME--NNRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N F SL + N ++
Sbjct: 215 IKTVTLVLAVSSGLSLGKEGPLVHVACCCGNLFCSLFSKYSKNEGKRREVLSAAAAAGVS 274
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 275 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNNRLVLFYVEYHT 334
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ +F R +AW
Sbjct: 335 PWY----MAELVPFILLGVFGGLWGTLFIRCNIAW 365
Score = 44 (20.5 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 67 WEFIKSLLDAWSGWLVMLLIGLLSGTLAGVIDLAVDWMTDLKEGVCL 113
>MGI|MGI:104571 [details] [associations]
symbol:Clcn4-2 "chloride channel 4-2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005247
"voltage-gated chloride channel activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0015297 "antiporter activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002246
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116 MGI:MGI:104571
GO:GO:0016021 GO:GO:0005524 GO:GO:0031901 GO:GO:0031902
GO:GO:0015297 eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493
HOVERGEN:HBG050984 KO:K05013 OMA:VITESGM EMBL:Z49916 EMBL:BC110668
EMBL:CH466983 IPI:IPI00121082 PIR:I48294 RefSeq:NP_035464.3
UniGene:Mm.297883 ProteinModelPortal:Q61418 SMR:Q61418
STRING:Q61418 PhosphoSite:Q61418 PaxDb:Q61418 PRIDE:Q61418
Ensembl:ENSMUST00000000619 GeneID:12727 KEGG:mmu:12727 CTD:12727
InParanoid:Q2TAX6 NextBio:282022 Bgee:Q61418 CleanEx:MM_CLCN4-2
Genevestigator:Q61418 GermOnline:ENSMUSG00000000605 Uniprot:Q61418
Length = 747
Score = 98 (39.6 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
+W L K+V T G + GL+ PS+ + ++
Sbjct: 429 MWQLALALIFKIVITIFTFGMKIPSGLFIPSMAVGAMAGRMVGIGVEQLAYHHHDWIIFR 488
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 489 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 540
Score = 90 (36.7 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 35/155 (22%), Positives = 56/155 (36%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 193 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 252
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 253 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHT 312
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ +FTR +AW
Sbjct: 313 PWY----MAELFPFILLGVFGGLWGTLFTRCNIAW 343
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 45 WEFIKSLLDAWSGWVVMLLIGLLAGTLAGVIDLAVDWMTDLKEGVCL 91
>UNIPROTKB|F1NGF2 [details] [associations]
symbol:CLCN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005247 "voltage-gated chloride channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002246
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 OMA:VITESGM EMBL:AADN02071240
EMBL:AADN02071241 EMBL:AADN02071242 EMBL:AADN02071243
IPI:IPI00596285 Ensembl:ENSGALT00000026803 Uniprot:F1NGF2
Length = 677
Score = 103 (41.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 391 SAPGIWL-LTQLAAA---KVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII-- 444
+ PG++ + QLA A K+V T G + GL+ PS+ + ++
Sbjct: 351 AGPGVYTAMWQLALALVFKIVITIFTFGMKIPSGLFIPSMAVGAMAGRMVGIGVEQLAYH 410
Query: 445 --------NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPL 496
N PG V P YA+VG AA L V + ++ V+++FELT ++PL
Sbjct: 411 HHDWIIFRNWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPL 469
Query: 497 M 497
M
Sbjct: 470 M 470
Score = 84 (34.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 34/155 (21%), Positives = 55/155 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 123 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 182
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 183 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHT 242
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ +F R +AW
Sbjct: 243 PWY----MAELFPFILLGVFGGLWGTLFIRCNIAW 273
>ZFIN|ZDB-GENE-030131-1699 [details] [associations]
symbol:clcn3 "chloride channel 3" species:7955
"Danio rerio" [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002245
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
ZFIN:ZDB-GENE-030131-1699 GO:GO:0016021 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 GeneTree:ENSGT00620000087693
CTD:1182 KO:K05012 EMBL:BX324230 EMBL:CT030698 IPI:IPI00999099
RefSeq:XP_001923503.1 UniGene:Dr.67078 Ensembl:ENSDART00000123469
GeneID:559340 KEGG:dre:559340 NextBio:20882913 ArrayExpress:F1QW31
Bgee:F1QW31 Uniprot:F1QW31
Length = 874
Score = 94 (38.1 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 37/140 (26%), Positives = 56/140 (40%)
Query: 374 YWGFTNVEEILHTGK-TASA--PGI----WLLTQLAAAKVVATALCKGSGLVGGLYAPSL 426
Y N + TG TASA PG+ W L+ K++ T G + GL+ PS+
Sbjct: 478 YRSLMNGSQADPTGPDTASAATPGVYSAMWQLSLALVFKIIMTIFTFGLKVPSGLFIPSM 537
Query: 427 MIXXXXXXXXXXXXXE---------IINSAIPGNVAVAEPQAYALVGMAATLASVCSVPL 477
I + + P YA+VG AA L V + +
Sbjct: 538 AIGAIAGRIVGIAVEQLAYYHHDWFVFREWCEVGADCITPGLYAMVGAAACLGGVTRMTV 597
Query: 478 TSVLLLFELTRDYRILLPLM 497
+ V+++FELT ++PLM
Sbjct: 598 SLVVIVFELTGGLEYIVPLM 617
Score = 83 (34.3 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 268 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSKNEAKKREVLSAASAAGVS 327
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 328 VAFGAPIGGVLFSLEEV 344
Score = 54 (24.1 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 128 AAWLRLQRLADTWHRILLIPVTG---GVIVGMMHGLLEILNQIKQSSSLDRQGFD 179
+AW + L D W L++ +TG G + G + + +N +K+ L F+
Sbjct: 118 SAWEFTKSLYDAWSGWLVVTLTGLASGALAGGIDIAADWMNDLKEGVCLSAMWFN 172
>UNIPROTKB|Q4F894 [details] [associations]
symbol:CLCN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002246
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493
HOVERGEN:HBG050984 CTD:1183 KO:K05013 OrthoDB:EOG4XD3QH
EMBL:DAAA02075515 EMBL:DAAA02075516 EMBL:BC151324 EMBL:DQ102705
IPI:IPI00707823 RefSeq:NP_001026927.1 UniGene:Bt.25654 SMR:Q4F894
Ensembl:ENSBTAT00000014770 Ensembl:ENSBTAT00000064202 GeneID:511699
KEGG:bta:511699 InParanoid:Q4F894 OMA:DHLVMFY NextBio:20870058
Uniprot:Q4F894
Length = 760
Score = 100 (40.3 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
IW L K++ T G + GL+ PS+ + ++
Sbjct: 442 IWQLALALIFKIIITIFTFGMKIPSGLFIPSMAVGAMAGRMVGIGVEQLAYHHHDWIIFR 501
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 502 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 553
Score = 84 (34.6 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 34/155 (21%), Positives = 55/155 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 206 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 265
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 266 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHT 325
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ +F R +AW
Sbjct: 326 PWY----MAELFPFILLGVFGGLWGTLFIRCNIAW 356
Score = 44 (20.5 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 58 WEFIKSLLDAWSGWAVMLLIGLLAGTLAGVIDLAVDWMTDLKEGICL 104
>FB|FBgn0036566 [details] [associations]
symbol:ClC-c "Chloride channel-c" species:7227 "Drosophila
melanogaster" [GO:0005254 "chloride channel activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005247 "voltage-gated
chloride channel activity" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PROSITE:PS51371 SMART:SM00116 GO:GO:0016021 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 FlyBase:FBgn0036566
EMBL:AY129438 ProteinModelPortal:Q8MQK2 STRING:Q8MQK2 PRIDE:Q8MQK2
InParanoid:Q8MQK2 ArrayExpress:Q8MQK2 Bgee:Q8MQK2 Uniprot:Q8MQK2
Length = 882
Score = 107 (42.7 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 36/121 (29%), Positives = 52/121 (42%)
Query: 389 TASAPG----IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII 444
T PG IWLL K+ T G + GL+ PSL++ +
Sbjct: 557 TEPGPGVYSSIWLLMLTFILKLALTIFTFGMKVPAGLFIPSLLLGAIMGRIVGIGVEQFA 616
Query: 445 NSA-----IPGNVA---VAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPL 496
S G A + P YA+VG AA L V + ++ V+++FELT R ++PL
Sbjct: 617 YSYPNIWFFTGECADSNLITPGLYAVVGAAAVLGGVTRMTVSLVVIMFELTGGVRYIVPL 676
Query: 497 M 497
M
Sbjct: 677 M 677
Score = 69 (29.3 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 19/77 (24%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK++ +++ G +LG EGP V I N FS + N +K
Sbjct: 331 IKSVGLMLSVSAGLTLGKEGPMVHIASCIGNIFSHVFPKYGRNEAKKREILSAAAAAGVS 390
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 391 VAFGAPIGGVLFSLEEV 407
Score = 51 (23.0 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 311 ELPLYLILGMLCGVVSVVFTRLVAWFTKSFDFIKEKFGLPPVV 353
EL ++ LG++ GV+ F + W+ + F K G PV+
Sbjct: 456 ELIPFVFLGIMGGVIGTFFIKANLWWCRYRKF--SKLGQYPVM 496
Score = 40 (19.1 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 140 WHRILLIPVTGGVIVGMM 157
W +LL+ + G + GM+
Sbjct: 197 WLCVLLVGIAAGCVAGMV 214
>UNIPROTKB|E1C9F7 [details] [associations]
symbol:CLCN3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005247 "voltage-gated chloride channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002245
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 EMBL:AADN02016396 EMBL:AADN02016397
IPI:IPI00598975 ProteinModelPortal:E1C9F7
Ensembl:ENSGALT00000015745 ArrayExpress:E1C9F7 Uniprot:E1C9F7
Length = 818
Score = 88 (36.0 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 86 (35.3 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 40/173 (23%), Positives = 60/173 (34%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 324 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHT 383
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTKSFDFIKEKFGLPPVV 353
P Y EL +++LG+ G+ F R +AW + KFG PV+
Sbjct: 384 PWY----LFELLPFILLGVFGGLWGAFFIRANIAWCRRRKS---TKFGKYPVL 429
Score = 55 (24.4 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>UNIPROTKB|P51793 [details] [associations]
symbol:CLCN4 "H(+)/Cl(-) exchange transporter 4"
species:9606 "Homo sapiens" [GO:0005247 "voltage-gated chloride
channel activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IDA] [GO:0006821 "chloride transport" evidence=IDA]
[GO:0006810 "transport" evidence=TAS] InterPro:IPR000644
InterPro:IPR001807 InterPro:IPR002246 InterPro:IPR014743
Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762 PRINTS:PR01115
PROSITE:PS51371 SMART:SM00116 GO:GO:0016021 GO:GO:0005524
GO:GO:0031901 GO:GO:0031902 EMBL:CH471074 GO:GO:0015297
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
HOGENOM:HOG000164493 HOVERGEN:HBG050984 EMBL:X77197 EMBL:AB019432
EMBL:AF170492 EMBL:AK289564 EMBL:BC130278 IPI:IPI00294055
PIR:I37242 RefSeq:NP_001821.2 UniGene:Hs.495674
ProteinModelPortal:P51793 SMR:P51793 STRING:P51793 TCDB:2.A.49.2.8
PhosphoSite:P51793 DMDM:20141247 PRIDE:P51793 DNASU:1183
Ensembl:ENST00000380833 GeneID:1183 KEGG:hsa:1183 UCSC:uc004csy.4
CTD:1183 GeneCards:GC0XP010085 H-InvDB:HIX0056096 HGNC:HGNC:2022
HPA:HPA031313 MIM:302910 neXtProt:NX_P51793 PharmGKB:PA26549
InParanoid:P51793 KO:K05013 OMA:VITESGM OrthoDB:EOG4XD3QH
PhylomeDB:P51793 ChiTaRS:CLCN4 GenomeRNAi:1183 NextBio:4890
ArrayExpress:P51793 Bgee:P51793 CleanEx:HS_CLCN4
Genevestigator:P51793 GermOnline:ENSG00000073464 Uniprot:P51793
Length = 760
Score = 99 (39.9 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
+W L K+V T G + GL+ PS+ + ++
Sbjct: 442 MWQLALALIFKIVVTIFTFGMKIPSGLFIPSMAVGAIAGRMVGIGVEQLAYHHHDWIIFR 501
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 502 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 553
Score = 84 (34.6 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 34/155 (21%), Positives = 55/155 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 206 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 265
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 266 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHT 325
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ +F R +AW
Sbjct: 326 PWY----MAELFPFILLGVFGGLWGTLFIRCNIAW 356
Score = 44 (20.5 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 58 WEFIKSLLDAWSGWVVMLLIGLLAGTLAGVIDLAVDWMTDLKEGVCL 104
>UNIPROTKB|E1C9F3 [details] [associations]
symbol:CLCN3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005247 "voltage-gated chloride channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0012506 "vesicle membrane" evidence=IEA] [GO:0030165 "PDZ
domain binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR000644
InterPro:IPR001807 InterPro:IPR002245 InterPro:IPR014743
Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762 PRINTS:PR01114
PROSITE:PS51371 SMART:SM00116 GO:GO:0016021 GO:GO:0005794
GO:GO:0005770 GO:GO:0012506 GO:GO:0005769 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 GeneTree:ENSGT00620000087693
CTD:1182 KO:K05012 OMA:EPLTPPW EMBL:AADN02016396 EMBL:AADN02016397
IPI:IPI00578369 RefSeq:XP_420400.2 UniGene:Gga.38841
ProteinModelPortal:E1C9F3 Ensembl:ENSGALT00000015746 GeneID:422432
KEGG:gga:422432 NextBio:20825066 ArrayExpress:E1C9F3 Uniprot:E1C9F3
Length = 866
Score = 88 (36.0 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 86 (35.3 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 40/173 (23%), Positives = 60/173 (34%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 324 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHT 383
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTKSFDFIKEKFGLPPVV 353
P Y EL +++LG+ G+ F R +AW + KFG PV+
Sbjct: 384 PWY----LFELLPFILLGVFGGLWGAFFIRANIAWCRRRKS---TKFGKYPVL 429
Score = 55 (24.4 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>TIGR_CMR|SO_1302 [details] [associations]
symbol:SO_1302 "chloride channel" species:211586
"Shewanella oneidensis MR-1" [GO:0005247 "voltage-gated chloride
channel activity" evidence=ISS] [GO:0006821 "chloride transport"
evidence=ISS] InterPro:IPR001807 InterPro:IPR014743 Pfam:PF00654
PRINTS:PR00762 GO:GO:0005886 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 HOGENOM:HOG000295419 OMA:YIGLYTI
ProtClustDB:CLSK906192 RefSeq:NP_716922.1 ProteinModelPortal:Q8EHC6
GeneID:1169125 KEGG:son:SO_1302 PATRIC:23522260 Uniprot:Q8EHC6
Length = 574
Score = 121 (47.7 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 34/105 (32%), Positives = 47/105 (44%)
Query: 393 PGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEIINSAIPGNV 452
P + LL L AK+VAT G G+ GGL P I + S P V
Sbjct: 319 PSLLLLIALLVAKIVATIAAIGLGIPGGLIGPLYGIGALIGAILALVSAILFPSIAP-YV 377
Query: 453 AVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
+ Y ++GM A + S PL +++ L E+T D I+LP M
Sbjct: 378 GL-----YTVIGMTAMMGVCLSAPLAALVALLEMTNDASIILPAM 417
Score = 60 (26.2 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 136 LADTWHRILLIPVTGGVIVGMMHGL-LEILNQIKQSSSLDRQGFDLVAGVFPTIKA---- 190
+AD W +L P+ G +++ + L + N++ + L R L G P A
Sbjct: 78 IAD-WRALL--PLFGALLIWFVAKLGSKRYNRMGIAYVLHR--VKLHYGKIPLQSAAGQF 132
Query: 191 IQAAVTLGTGCSLGPEGPSVDIGKSCAN 218
QA LGT S+G EGP++ +G A+
Sbjct: 133 FQALFALGTNFSVGREGPAIHLGAVSAS 160
>UNIPROTKB|F1PWQ5 [details] [associations]
symbol:CLCN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002246
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 CTD:1183 KO:K05013 OMA:VITESGM
EMBL:AAEX03026139 RefSeq:XP_848379.1 Ensembl:ENSCAFT00000018340
GeneID:491736 KEGG:cfa:491736 Uniprot:F1PWQ5
Length = 760
Score = 98 (39.6 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
+W L K+V T G + GL+ PS+ + ++
Sbjct: 442 MWQLALALIFKIVITIFTFGMKIPSGLFIPSMAVGAMAGRMVGIGVEQLAYHHHDWIVFR 501
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 502 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 553
Score = 84 (34.6 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 34/155 (21%), Positives = 55/155 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 206 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 265
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 266 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHT 325
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ +F R +AW
Sbjct: 326 PWY----MAELFPFILLGVFGGLWGTLFIRCNIAW 356
Score = 44 (20.5 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 58 WEFIKSLLDAWSGWVVMLLIGLLAGTLAGVIDLAVDWMTDLKEGVCL 104
>UNIPROTKB|E9PE15 [details] [associations]
symbol:CLCN3 "H(+)/Cl(-) exchange transporter 3"
species:9606 "Homo sapiens" [GO:0005247 "voltage-gated chloride
channel activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
EMBL:AC106878 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
EMBL:AC084724 HGNC:HGNC:2021 ChiTaRS:CLCN3 IPI:IPI00965483
ProteinModelPortal:E9PE15 SMR:E9PE15 Ensembl:ENST00000507875
ArrayExpress:E9PE15 Bgee:E9PE15 Uniprot:E9PE15
Length = 725
Score = 88 (36.0 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 473 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 532
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 533 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 584
Score = 83 (34.3 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 237 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 296
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 297 VAFGAPIGGVLFSLEEV 313
Score = 55 (24.4 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 87 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 121
>UNIPROTKB|Q9R279 [details] [associations]
symbol:CLCN3 "H(+)/Cl(-) exchange transporter 3"
species:10141 "Cavia porcellus" [GO:0005247 "voltage-gated chloride
channel activity" evidence=ISS] [GO:0005769 "early endosome"
evidence=ISS] [GO:0005770 "late endosome" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0012506 "vesicle membrane"
evidence=ISS] [GO:0030165 "PDZ domain binding" evidence=ISS]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002245
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
GO:GO:0005524 GO:GO:0005794 GO:GO:0031901 GO:GO:0031902
GO:GO:0005770 GO:GO:0012506 GO:GO:0015297 GO:GO:0030165
GO:GO:0005769 GO:GO:0030658 eggNOG:COG0038 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 EMBL:AF133214
ProteinModelPortal:Q9R279 SMR:Q9R279 Ensembl:ENSCPOT00000020297
GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493
HOVERGEN:HBG050984 Uniprot:Q9R279
Length = 760
Score = 88 (36.0 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 442 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYFHHDWFIFK 501
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 502 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 553
Score = 83 (34.3 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 206 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 265
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 266 VAFGAPIGGVLFSLEEV 282
Score = 55 (24.4 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 56 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 90
>UNIPROTKB|B7Z5Z4 [details] [associations]
symbol:CLCN4 "cDNA FLJ50190, highly similar to Chloride
channel protein 4" species:9606 "Homo sapiens" [GO:0005247
"voltage-gated chloride channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000644
InterPro:IPR001807 InterPro:IPR002246 InterPro:IPR014743
Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762 PRINTS:PR01115
PROSITE:PS51371 SMART:SM00116 GO:GO:0016021 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 HOVERGEN:HBG050984
UniGene:Hs.495674 GeneID:1183 KEGG:hsa:1183 CTD:1183 HGNC:HGNC:2022
KO:K05013 ChiTaRS:CLCN4 GenomeRNAi:1183 EMBL:AC003666 EMBL:AC121345
EMBL:AK299611 IPI:IPI01009328 RefSeq:NP_001243873.1 SMR:B7Z5Z4
STRING:B7Z5Z4 Ensembl:ENST00000421085 Uniprot:B7Z5Z4
Length = 666
Score = 99 (39.9 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
+W L K+V T G + GL+ PS+ + ++
Sbjct: 348 MWQLALALIFKIVVTIFTFGMKIPSGLFIPSMAVGAIAGRMVGIGVEQLAYHHHDWIIFR 407
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 408 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 459
Score = 84 (34.6 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 34/155 (21%), Positives = 55/155 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 112 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 171
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + +
Sbjct: 172 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHT 231
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P Y AEL +++LG+ G+ +F R +AW
Sbjct: 232 PWY----MAELFPFILLGVFGGLWGTLFIRCNIAW 262
>UNIPROTKB|B9EGJ9 [details] [associations]
symbol:CLCN3 "CLCN3 protein" species:9606 "Homo sapiens"
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000644
InterPro:IPR001807 InterPro:IPR002245 InterPro:IPR014743
Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762 PRINTS:PR01114
PROSITE:PS51371 SMART:SM00116 GO:GO:0016021 EMBL:AC106878
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
HOVERGEN:HBG050984 EMBL:AC084724 RefSeq:NP_001820.2
UniGene:Hs.481186 UniGene:Hs.736017 DNASU:1182 GeneID:1182
KEGG:hsa:1182 CTD:1182 HGNC:HGNC:2021 KO:K05012 ChiTaRS:CLCN3
GenomeRNAi:1182 NextBio:4884 EMBL:BC136510 IPI:IPI00965483
SMR:B9EGJ9 STRING:B9EGJ9 Ensembl:ENST00000504131 UCSC:uc011cjz.2
OrthoDB:EOG40VVNX Uniprot:B9EGJ9
Length = 801
Score = 88 (36.0 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 483 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 542
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 543 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 594
Score = 83 (34.3 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 247 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 306
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 307 VAFGAPIGGVLFSLEEV 323
Score = 55 (24.4 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 97 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 131
>UNIPROTKB|E2R876 [details] [associations]
symbol:CLCN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002245
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 EMBL:AAEX03014299
ProteinModelPortal:E2R876 Ensembl:ENSCAFT00000038926 Uniprot:E2R876
Length = 818
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>UNIPROTKB|P51790 [details] [associations]
symbol:CLCN3 "H(+)/Cl(-) exchange transporter 3"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0015297 "antiporter activity" evidence=IEA] [GO:0005247
"voltage-gated chloride channel activity" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0048388
"endosomal lumen acidification" evidence=TAS] [GO:0005254 "chloride
channel activity" evidence=TAS] [GO:0012506 "vesicle membrane"
evidence=IDA] [GO:0005770 "late endosome" evidence=IDA] [GO:0016021
"integral to membrane" evidence=TAS] [GO:0030165 "PDZ domain
binding" evidence=IDA] [GO:0006885 "regulation of pH" evidence=TAS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=NAS] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0009986 "cell surface" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006810 "transport"
evidence=TAS] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0005524 GO:GO:0005794 GO:GO:0042803
GO:GO:0009986 GO:GO:0031901 GO:GO:0000139 GO:GO:0031902
GO:GO:0016324 GO:GO:0005770 GO:GO:0048388 EMBL:CH471056
GO:GO:0012506 GO:GO:0046982 GO:GO:0015297 GO:GO:0030165
GO:GO:0005769 GO:GO:0030658 EMBL:AC106878 eggNOG:COG0038
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
HOGENOM:HOG000164493 EMBL:X78520 EMBL:AF029346 EMBL:AF172729
EMBL:AB019542 EMBL:AK304362 EMBL:BX647119 EMBL:AC084724
IPI:IPI00398349 IPI:IPI00413568 PIR:I37240 RefSeq:NP_001230301.1
RefSeq:NP_001230303.1 RefSeq:NP_001820.2 RefSeq:NP_776297.2
UniGene:Hs.481186 UniGene:Hs.736017 ProteinModelPortal:P51790
SMR:P51790 IntAct:P51790 MINT:MINT-1783418 STRING:P51790
PhosphoSite:P51790 DMDM:226693513 PaxDb:P51790 PRIDE:P51790
DNASU:1182 Ensembl:ENST00000347613 Ensembl:ENST00000360642
Ensembl:ENST00000513761 GeneID:1182 KEGG:hsa:1182 UCSC:uc003ish.3
UCSC:uc003isi.3 CTD:1182 GeneCards:GC04P170541 H-InvDB:HIX0024545
HGNC:HGNC:2021 HPA:HPA044723 MIM:600580 neXtProt:NX_P51790
PharmGKB:PA26548 KO:K05012 OMA:EPLTPPW PhylomeDB:P51790
ChiTaRS:CLCN3 GenomeRNAi:1182 NextBio:4884 ArrayExpress:P51790
Bgee:P51790 CleanEx:HS_CLCN3 Genevestigator:P51790
GermOnline:ENSG00000109572 Uniprot:P51790
Length = 818
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>UNIPROTKB|O18894 [details] [associations]
symbol:CLCN3 "H(+)/Cl(-) exchange transporter 3"
species:9986 "Oryctolagus cuniculus" [GO:0005247 "voltage-gated
chloride channel activity" evidence=ISS] [GO:0005769 "early
endosome" evidence=ISS] [GO:0005770 "late endosome" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0012506 "vesicle
membrane" evidence=ISS] [GO:0030165 "PDZ domain binding"
evidence=ISS] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0005524 GO:GO:0005794 GO:GO:0031901
GO:GO:0031902 GO:GO:0005770 GO:GO:0012506 GO:GO:0015297
GO:GO:0030165 GO:GO:0005769 GO:GO:0030658 eggNOG:COG0038
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493 CTD:1182
EMBL:AF029348 RefSeq:NP_001075498.1 UniGene:Ocu.2190
ProteinModelPortal:O18894 SMR:O18894 PRIDE:O18894
Ensembl:ENSOCUT00000028428 GeneID:100008673 Uniprot:O18894
Length = 818
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>MGI|MGI:103555 [details] [associations]
symbol:Clcn3 "chloride channel 3" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=ISO] [GO:0005244
"voltage-gated ion channel activity" evidence=ISO] [GO:0005247
"voltage-gated chloride channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005770 "late endosome" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=ISO] [GO:0006821 "chloride transport"
evidence=ISO] [GO:0012506 "vesicle membrane" evidence=ISO]
[GO:0015297 "antiporter activity" evidence=IEA] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0016324 "apical plasma membrane" evidence=ISO]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0034765 "regulation of ion
transmembrane transport" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0055085
"transmembrane transport" evidence=IEA] InterPro:IPR000644
InterPro:IPR001807 InterPro:IPR002245 InterPro:IPR014743
Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762 PRINTS:PR01114
PROSITE:PS51371 SMART:SM00116 MGI:MGI:103555 GO:GO:0016021
GO:GO:0005524 GO:GO:0005794 GO:GO:0031901 GO:GO:0031902
GO:GO:0005770 GO:GO:0012506 GO:GO:0015297 GO:GO:0030165
GO:GO:0005769 GO:GO:0030658 EMBL:CH466569 UniGene:Mm.25263
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493
HOVERGEN:HBG050984 CTD:1182 KO:K05012 EMBL:X78874 EMBL:AF029347
EMBL:AF347688 EMBL:AF347682 EMBL:AF347683 EMBL:AF347684
EMBL:AF347685 EMBL:AF347686 EMBL:AK141136 EMBL:AK159698
EMBL:AK162639 IPI:IPI00126619 IPI:IPI00830653 PIR:I48295
RefSeq:NP_031737.1 RefSeq:NP_776298.1 UniGene:Mm.259751
ProteinModelPortal:P51791 SMR:P51791 STRING:P51791
PhosphoSite:P51791 PaxDb:P51791 PRIDE:P51791
Ensembl:ENSMUST00000093490 Ensembl:ENSMUST00000110301 GeneID:12725
KEGG:mmu:12725 UCSC:uc009ltn.2 NextBio:282016 Bgee:P51791
CleanEx:MM_CLCN3 Genevestigator:P51791
GermOnline:ENSMUSG00000004319 Uniprot:P51791
Length = 818
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>RGD|621219 [details] [associations]
symbol:Clcn3 "chloride channel, voltage-sensitive 3"
species:10116 "Rattus norvegicus" [GO:0005216 "ion channel
activity" evidence=IDA] [GO:0005244 "voltage-gated ion channel
activity" evidence=IDA] [GO:0005247 "voltage-gated chloride channel
activity" evidence=IEA;IDA] [GO:0005254 "chloride channel activity"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IDA] [GO:0005769 "early endosome"
evidence=ISO;ISS] [GO:0005770 "late endosome" evidence=ISO;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISO;ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006811 "ion transport" evidence=IDA]
[GO:0006821 "chloride transport" evidence=IDA] [GO:0012506 "vesicle
membrane" evidence=ISO;ISS] [GO:0015297 "antiporter activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0030165 "PDZ domain binding"
evidence=ISO;ISS] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0034765
"regulation of ion transmembrane transport" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002245
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116 RGD:621219
GO:GO:0016021 GO:GO:0005524 GO:GO:0005794 GO:GO:0031901
GO:GO:0031902 GO:GO:0016324 GO:GO:0005770 GO:GO:0012506
GO:GO:0015297 GO:GO:0030165 GO:GO:0005769 GO:GO:0030658
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
HOGENOM:HOG000164493 HOVERGEN:HBG050984 CTD:1182 KO:K05012
EMBL:D17521 EMBL:AF142778 IPI:IPI00566593 IPI:IPI00950071
RefSeq:NP_445815.2 UniGene:Rn.4175 ProteinModelPortal:P51792
SMR:P51792 STRING:P51792 TCDB:2.A.49.2.3 GeneID:84360
KEGG:rno:84360 UCSC:RGD:621219 NextBio:616697 ArrayExpress:P51792
Genevestigator:P51792 GermOnline:ENSRNOG00000010682 Uniprot:P51792
Length = 818
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>UNIPROTKB|Q4LAL8 [details] [associations]
symbol:clcn3 "Chloride channel 3" species:9615 "Canis lupus
familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0012506 "vesicle membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005247 "voltage-gated chloride channel
activity" evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0005794 GO:GO:0005770 GO:GO:0012506
GO:GO:0005769 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493
HOVERGEN:HBG050984 OMA:EPLTPPW EMBL:AAEX03014299 EMBL:AM048628
UniGene:Cfa.1328 SMR:Q4LAL8 Ensembl:ENSCAFT00000038928
Uniprot:Q4LAL8
Length = 838
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 473 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 532
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 533 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 584
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 237 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 296
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 297 VAFGAPIGGVLFSLEEV 313
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 87 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 121
>UNIPROTKB|D4A487 [details] [associations]
symbol:Clcn3 "H(+)/Cl(-) exchange transporter 3"
species:10116 "Rattus norvegicus" [GO:0005247 "voltage-gated
chloride channel activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
RGD:621219 GO:GO:0016021 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 IPI:IPI00476274 ProteinModelPortal:D4A487
Ensembl:ENSRNOT00000014984 ArrayExpress:D4A487 Uniprot:D4A487
Length = 839
Score = 88 (36.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 473 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 532
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 533 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 584
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 237 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 296
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 297 VAFGAPIGGVLFSLEEV 313
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 87 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 121
>UNIPROTKB|Q5RDJ7 [details] [associations]
symbol:CLCN3 "H(+)/Cl(-) exchange transporter 3"
species:9601 "Pongo abelii" [GO:0005247 "voltage-gated chloride
channel activity" evidence=ISS] [GO:0005769 "early endosome"
evidence=ISS] [GO:0005770 "late endosome" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0012506 "vesicle membrane"
evidence=ISS] [GO:0030165 "PDZ domain binding" evidence=ISS]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002245
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
GO:GO:0005524 GO:GO:0005794 GO:GO:0031901 GO:GO:0031902
GO:GO:0005770 GO:GO:0012506 GO:GO:0015297 GO:GO:0030165
GO:GO:0005769 GO:GO:0030658 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 HOVERGEN:HBG050984 CTD:1182 KO:K05012 EMBL:CR857911
RefSeq:NP_001127245.1 UniGene:Pab.7334 ProteinModelPortal:Q5RDJ7
SMR:Q5RDJ7 GeneID:100174300 KEGG:pon:100174300 Uniprot:Q5RDJ7
Length = 801
Score = 88 (36.0 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 30/103 (29%), Positives = 44/103 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEIINSAIPGNVAV 454
IW L K++ T G + GL+ PS M E+ I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPS-MAYYHHDWFIFKEWCEVGADCIT----- 553
Query: 455 AEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 554 --PGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 594
Score = 82 (33.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 20/77 (25%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTVTLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 55 (24.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>WB|WBGene00000531 [details] [associations]
symbol:clh-4 species:6239 "Caenorhabditis elegans"
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR013785
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PROSITE:PS51371 SMART:SM00116 GO:GO:0016021 GO:GO:0003824
Gene3D:3.20.20.70 GO:GO:0008152 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 GeneTree:ENSGT00620000087869 EMBL:FO081664
RefSeq:NP_001024886.1 UniGene:Cel.19435 ProteinModelPortal:H2L0J1
PRIDE:H2L0J1 EnsemblMetazoa:T06F4.2b GeneID:180687
KEGG:cel:CELE_T06F4.2 CTD:180687 WormBase:T06F4.2b OMA:VSVMIFE
Uniprot:H2L0J1
Length = 1085
Score = 102 (41.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 45/180 (25%), Positives = 66/180 (36%)
Query: 189 KAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN----NRE--RKIXXXXXXXXXX 242
K A+ LG+G +G GP V I AN L+ RE R++
Sbjct: 247 KIFGVAMALGSGVPIGKMGPFVHIASVVANQMCLLAAKFDSAYREESRRMECLAAACAVG 306
Query: 243 XXXXXXXXVAGCFFAIE--TVLRPLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFT 300
V G F+IE T+ +R+ F AF
Sbjct: 307 VACTFSSPVGGVLFSIEVTTMYFSVRSYWRGFFAACCGATTIRLLRAYVVETEVTVSAFY 366
Query: 301 VPSY--DLKSAAELPLYLILGMLCGVVSVVFT---RLVAWFTKSFDFIKEKFGLPPVVCP 355
S+ D S ELPL+ +LG+LCG++ + R V F ++ + K F +V P
Sbjct: 367 QTSFRPDAFSVDELPLFALLGLLCGILGAGYISLYRCVVLFLRNNQYAKMVFQRHWIVYP 426
Score = 84 (34.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 442 EIINSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
EII A+ ++ + P YA+VG AA ASV SV++ FE+T +LP+M
Sbjct: 533 EIIGLALE-DIHIIHPGIYAIVGAAAFSASVTHTVSVSVMI-FEITGQLHFILPVM 586
>UNIPROTKB|D4A7Q0 [details] [associations]
symbol:Clcn3 "H(+)/Cl(-) exchange transporter 3"
species:10116 "Rattus norvegicus" [GO:0005247 "voltage-gated
chloride channel activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
RGD:621219 GO:GO:0016021 GO:GO:0005794 GO:GO:0005770 GO:GO:0012506
GO:GO:0005769 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
OMA:EPLTPPW OrthoDB:EOG40VVNX IPI:IPI00364645
ProteinModelPortal:D4A7Q0 Ensembl:ENSRNOT00000014845
ArrayExpress:D4A7Q0 Uniprot:D4A7Q0
Length = 866
Score = 88 (36.0 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 83 (34.3 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 55 (24.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>UNIPROTKB|F1N299 [details] [associations]
symbol:CLCN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0012506 "vesicle membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005247 "voltage-gated chloride channel
activity" evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0005794 GO:GO:0005770 GO:GO:0012506
GO:GO:0005769 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 CTD:1182 KO:K05012 OMA:EPLTPPW
EMBL:DAAA02021754 EMBL:DAAA02021755 IPI:IPI00698842
RefSeq:NP_001179932.1 UniGene:Bt.63034 ProteinModelPortal:F1N299
Ensembl:ENSBTAT00000026813 GeneID:522719 KEGG:bta:522719
NextBio:20873580 Uniprot:F1N299
Length = 866
Score = 88 (36.0 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 82 (33.9 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/77 (25%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTVTLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 55 (24.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 114 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 148
>UNIPROTKB|F1RIY2 [details] [associations]
symbol:CLCN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0012506 "vesicle membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005247 "voltage-gated chloride channel
activity" evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0005794 GO:GO:0005770 GO:GO:0012506
GO:GO:0005769 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 OMA:EPLTPPW EMBL:CT737303
EMBL:CU633253 Ensembl:ENSSSCT00000010649 Uniprot:F1RIY2
Length = 839
Score = 88 (36.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 473 IWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 532
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 533 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 584
Score = 81 (33.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + C N FS + N +K
Sbjct: 237 IKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAQGVS 296
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 297 VAFGARLGGVLFSLEEV 313
Score = 55 (24.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + GL++I
Sbjct: 87 SAWEMTKSLYDAWSGWLVVTLTG-LASGALAGLIDI 121
>UNIPROTKB|G3XAG5 [details] [associations]
symbol:CLCN4 "H(+)/Cl(-) exchange transporter 4"
species:9606 "Homo sapiens" [GO:0005247 "voltage-gated chloride
channel activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002246 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 EMBL:CH471074 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 UniGene:Hs.495674 HGNC:HGNC:2022 ChiTaRS:CLCN4
EMBL:AC003666 EMBL:AC121345 ProteinModelPortal:G3XAG5 SMR:G3XAG5
Ensembl:ENST00000380829 ArrayExpress:G3XAG5 Bgee:G3XAG5
Uniprot:G3XAG5
Length = 729
Score = 99 (39.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
+W L K+V T G + GL+ PS+ + ++
Sbjct: 411 MWQLALALIFKIVVTIFTFGMKIPSGLFIPSMAVGAIAGRMVGIGVEQLAYHHHDWIIFR 470
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 471 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 522
Score = 78 (32.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 19/77 (24%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 206 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 265
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 266 VAFGAPIGGVLFSLEEV 282
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 58 WEFIKSLLDAWSGWVVMLLIGLLAGTLAGVIDLAVDWMTDLKEGVCL 104
>UNIPROTKB|D3ZZS0 [details] [associations]
symbol:Clcn4-2 "Protein Clcn4-2" species:10116 "Rattus
norvegicus" [GO:0005247 "voltage-gated chloride channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002246
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01115 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340 IPI:IPI00777564
ProteinModelPortal:D3ZZS0 Ensembl:ENSRNOT00000004778
ArrayExpress:D3ZZS0 Uniprot:D3ZZS0
Length = 716
Score = 98 (39.6 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII---------- 444
+W L K+V T G + GL+ PS+ + ++
Sbjct: 398 MWQLALALIFKIVITIFTFGMKIPSGLFIPSMAVGAMAGRMVGIGVEQLAYHHHDWIIFR 457
Query: 445 NSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
N PG V P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 458 NWCRPGADCVT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 509
Score = 78 (32.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 19/77 (24%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMEN---NRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N ++
Sbjct: 193 IKTVTLVLVVSSGLSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVS 252
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 253 VAFGAPIGGVLFSLEEV 269
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 130 WLRLQRLADTWHR---ILLIPVTGGVIVGMMHGLLEILNQIKQSSSL 173
W ++ L D W +LLI + G + G++ ++ + +K+ L
Sbjct: 45 WEFIKSLLDAWSGWVVMLLIGLLAGTLAGVIDLAVDWMTDLKEGVCL 91
>UNIPROTKB|B4F6X6 [details] [associations]
symbol:clcn3 "Putative uncharacterized protein"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005769 "early
endosome" evidence=ISS] [GO:0005770 "late endosome" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0012506 "vesicle
membrane" evidence=ISS] [GO:0030165 "PDZ domain binding"
evidence=ISS] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002245 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01114 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0005794 GO:GO:0005770 GO:GO:0012506
GO:GO:0030165 GO:GO:0005769 eggNOG:COG0038 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 HOGENOM:HOG000164493
HOVERGEN:HBG050984 CTD:1182 KO:K05012 EMBL:BC168049
RefSeq:NP_001135560.1 UniGene:Str.57764 ProteinModelPortal:B4F6X6
STRING:B4F6X6 GeneID:100216107 KEGG:xtr:100216107
Xenbase:XB-GENE-950794 Uniprot:B4F6X6
Length = 818
Score = 89 (36.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
IW L K++ T G + GL+ PS+ I + I
Sbjct: 500 IWQLCLALVFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFK 559
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 560 EWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLM 611
Score = 82 (33.9 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 20/77 (25%), Positives = 30/77 (38%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMM---ENNRERKIXXXXXXXXXXXX 244
IK + + + +G SLG EGP V + C N FS + N +K
Sbjct: 264 IKTVTLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVS 323
Query: 245 XXXXXXVAGCFFAIETV 261
+ G F++E V
Sbjct: 324 VAFGAPIGGVLFSLEEV 340
Score = 50 (22.7 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 128 AAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEI 163
+AW + L D W L++ +TG + G + G ++I
Sbjct: 114 SAWELAKSLYDAWSGWLVVTLTG-LASGALAGFIDI 148
>SGD|S000003801 [details] [associations]
symbol:GEF1 "Voltage-gated chloride channel localized to the
golgi, the endosomal" species:4932 "Saccharomyces cerevisiae"
[GO:0006878 "cellular copper ion homeostasis" evidence=IMP]
[GO:0006879 "cellular iron ion homeostasis" evidence=IMP]
[GO:0005768 "endosome" evidence=IEA;IDA] [GO:0005794 "Golgi
apparatus" evidence=IEA;IDA] [GO:0005247 "voltage-gated chloride
channel activity" evidence=IEA;IDA] [GO:0005797 "Golgi medial
cisterna" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA;IDA] [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA;ISM] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PROSITE:PS51371 SMART:SM00116 SGD:S000003801 GO:GO:0005783
GO:GO:0016021 GO:GO:0005886 GO:GO:0005774 GO:GO:0000139
EMBL:BK006943 GO:GO:0005789 GO:GO:0005768 GO:GO:0006878
GO:GO:0006879 GO:GO:0010008 GO:GO:0000324 GO:GO:0034707
GO:GO:0005797 EMBL:L36344 eggNOG:COG0038 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 KO:K05393
GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493 EMBL:Z23117
EMBL:L29347 EMBL:Z49540 PIR:S50054 RefSeq:NP_012574.1
ProteinModelPortal:P37020 SMR:P37020 DIP:DIP-3949N IntAct:P37020
MINT:MINT-492781 STRING:P37020 TCDB:2.A.49.1.1 PaxDb:P37020
EnsemblFungi:YJR040W GeneID:853497 KEGG:sce:YJR040W OMA:GILFHEC
OrthoDB:EOG48WG9C NextBio:974134 Genevestigator:P37020
GermOnline:YJR040W Uniprot:P37020
Length = 779
Score = 117 (46.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 31/104 (29%), Positives = 52/104 (50%)
Query: 397 LLTQLAAAKVVATALCK---GSGLVGGLYAPSLMIXXXXXXXXXXXXXEIINSAIPGNVA 453
+ T L A V+ L G+ + G++ PS+ + I+ P +
Sbjct: 440 IFTSLCFATVIRALLVVVSYGARVPAGIFVPSMAVGATFGRAVSLLVERFISG--P---S 494
Query: 454 VAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
V P AYA +G AATL+ + ++ LT V+++FELT + ++PLM
Sbjct: 495 VITPGAYAFLGAAATLSGITNLTLTVVVIMFELTGAFMYIIPLM 538
Score = 60 (26.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSC 216
IK++ + + +G S+G EGPSV C
Sbjct: 212 IKSVALPLAISSGLSVGKEGPSVHYATCC 240
>ZFIN|ZDB-GENE-110407-11 [details] [associations]
symbol:clcn5 "chloride channel 5" species:7955
"Danio rerio" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0005247 "voltage-gated chloride
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR014743
Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762 PROSITE:PS51371
SMART:SM00116 ZFIN:ZDB-GENE-110407-11 GO:GO:0016021 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 GeneTree:ENSGT00620000087693
EMBL:AL928799 EMBL:CR381635 IPI:IPI00506438 RefSeq:XP_685762.2
Ensembl:ENSDART00000029725 Ensembl:ENSDART00000148502 GeneID:557584
KEGG:dre:557584 NextBio:20882055 Uniprot:E7FFG9
Length = 811
Score = 99 (39.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 391 SAPGIWL-LTQLAAA---KVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII-- 444
+ PG++ + QLA A K+V T G + GL+ PS+ + ++
Sbjct: 485 AGPGLYTAMWQLALALLFKMVMTVATFGMKVPSGLFIPSMAVGAIAGRLLGVFMEQLAVY 544
Query: 445 --NSAI------PGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPL 496
+ AI PG + P YA+VG AA L V + ++ V+++FELT ++PL
Sbjct: 545 HHDWAIFRGWCSPGTDCIT-PGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPL 603
Query: 497 M 497
M
Sbjct: 604 M 604
Score = 76 (31.8 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 35/155 (22%), Positives = 53/155 (34%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN---GFSLMMENNRERKIXXXXXXXXXXXX 244
IK I + + +G SLG EGP V + CAN F N ++
Sbjct: 251 IKTITLVLAVSSGLSLGKEGPLVHVACCCANILCHFFTKYRRNEAKRREVLSAASAVGVS 310
Query: 245 XXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXA-FTV 301
+ G F++E V PL+ F + F
Sbjct: 311 VAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEFHT 370
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAW 335
P + L EL +++LG+ G+ F R +AW
Sbjct: 371 PWHFL----ELIPFILLGIFGGLWGAFFIRANIAW 401
>UNIPROTKB|Q9TTU3 [details] [associations]
symbol:CLCN5 "H(+)/Cl(-) exchange transporter 5"
species:9986 "Oryctolagus cuniculus" [GO:0006897 "endocytosis"
evidence=ISS] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002247 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01116 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0000139
GO:GO:0045177 GO:GO:0006897 GO:GO:0010008 GO:GO:0015297
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
HOGENOM:HOG000164493 HOVERGEN:HBG050984 OrthoDB:EOG4XD3QH CTD:1184
EMBL:AF195523 RefSeq:NP_001075537.1 UniGene:Ocu.2391
ProteinModelPortal:Q9TTU3 SMR:Q9TTU3 GeneID:100008741
Uniprot:Q9TTU3
Length = 746
Score = 99 (39.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
+W L K+V T G + GL+ PS+ + + I N
Sbjct: 428 MWQLALALILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWTIFN 487
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
S P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 488 SWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 539
Score = 75 (31.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 35/158 (22%), Positives = 56/158 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN----GFSLMMENNRERKIXXXXXXXXXXX 243
IK I + + +G SLG EGP V + C N F+ +N +R+
Sbjct: 193 IKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHRFNKYRKNEAKRR-EVLSAAAAAGV 251
Query: 244 XXXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
+ G F++E V PL+ F + F V
Sbjct: 252 SVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVL---FYV 308
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTK 338
+ EL +++LG+ G+ +F R +AW K
Sbjct: 309 EFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRK 346
>MGI|MGI:99486 [details] [associations]
symbol:Clcn5 "chloride channel 5" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0005247 "voltage-gated chloride
channel activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005768 "endosome" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=ISO] [GO:0006897 "endocytosis" evidence=IMP] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=ISO;IDA] [GO:0055085
"transmembrane transport" evidence=IEA] InterPro:IPR000644
InterPro:IPR001807 InterPro:IPR002247 InterPro:IPR014743
Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762 PRINTS:PR01116
PROSITE:PS51371 SMART:SM00116 MGI:MGI:99486 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0000139 GO:GO:0045177
GO:GO:0006897 GO:GO:0010008 GO:GO:0015297 EMBL:AL808124
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493
HOVERGEN:HBG050984 OrthoDB:EOG4XD3QH CTD:1184 KO:K05014
EMBL:AF134117 IPI:IPI00125851 RefSeq:NP_057900.3 UniGene:Mm.486257
ProteinModelPortal:Q9WVD4 SMR:Q9WVD4 STRING:Q9WVD4 PaxDb:Q9WVD4
PRIDE:Q9WVD4 Ensembl:ENSMUST00000004428 GeneID:12728 KEGG:mmu:12728
InParanoid:B1AXN0 ChiTaRS:CLCN5 NextBio:282026 Bgee:Q9WVD4
CleanEx:MM_CLCN5 Genevestigator:Q9WVD4
GermOnline:ENSMUSG00000004317 Uniprot:Q9WVD4
Length = 746
Score = 99 (39.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
+W L K+V T G + GL+ PS+ + + I N
Sbjct: 428 MWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWGIFN 487
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
S P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 488 SWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 539
Score = 75 (31.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 35/158 (22%), Positives = 56/158 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN----GFSLMMENNRERKIXXXXXXXXXXX 243
IK I + + +G SLG EGP V + C N F+ +N +R+
Sbjct: 193 IKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFNKYRKNEAKRR-EVLSAAAAAGV 251
Query: 244 XXXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
+ G F++E V PL+ F + F V
Sbjct: 252 SVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVL---FYV 308
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTK 338
+ EL +++LG+ G+ +F R +AW K
Sbjct: 309 EFHTPWHLFELVPFIVLGIFGGLWGALFIRTNIAWCRK 346
>RGD|2362 [details] [associations]
symbol:Clcn5 "chloride channel, voltage-sensitive 5" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IDA] [GO:0006897
"endocytosis" evidence=IEA;ISO] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO;IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045177 "apical part of cell"
evidence=IEA;ISO;ISS] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002247 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01116 PROSITE:PS51371 SMART:SM00116 RGD:2362
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0000139 GO:GO:0016020
GO:GO:0005768 GO:GO:0045177 GO:GO:0006897 GO:GO:0010008 GO:GO:0015297
eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340
GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493 HOVERGEN:HBG050984
OrthoDB:EOG4XD3QH CTD:1184 KO:K05014 OMA:SYNGGGI EMBL:Z56277
EMBL:D50497 IPI:IPI00326242 RefSeq:NP_058802.1 UniGene:Rn.10337
ProteinModelPortal:P51796 SMR:P51796 STRING:P51796 PhosphoSite:P51796
PRIDE:P51796 Ensembl:ENSRNOT00000003895 GeneID:25749 KEGG:rno:25749
UCSC:RGD:2362 InParanoid:P51796 NextBio:607935 ArrayExpress:P51796
Genevestigator:P51796 GermOnline:ENSRNOG00000002862 Uniprot:P51796
Length = 746
Score = 99 (39.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
+W L K+V T G + GL+ PS+ + + I N
Sbjct: 428 MWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWGIFN 487
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
S P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 488 SWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 539
Score = 75 (31.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 35/158 (22%), Positives = 56/158 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN----GFSLMMENNRERKIXXXXXXXXXXX 243
IK I + + +G SLG EGP V + C N F+ +N +R+
Sbjct: 193 IKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFNKYRKNEAKRR-EVLSAAAAAGV 251
Query: 244 XXXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
+ G F++E V PL+ F + F V
Sbjct: 252 SVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVL---FYV 308
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTK 338
+ EL +++LG+ G+ +F R +AW K
Sbjct: 309 EFHTPWHLFELVPFIVLGIFGGLWGALFIRTNIAWCRK 346
>UNIPROTKB|P51796 [details] [associations]
symbol:Clcn5 "H(+)/Cl(-) exchange transporter 5"
species:10116 "Rattus norvegicus" [GO:0006897 "endocytosis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002247
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01116 PROSITE:PS51371 SMART:SM00116 RGD:2362 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0000139 GO:GO:0016020
GO:GO:0005768 GO:GO:0045177 GO:GO:0006897 GO:GO:0010008
GO:GO:0015297 eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 GeneTree:ENSGT00620000087693 HOGENOM:HOG000164493
HOVERGEN:HBG050984 OrthoDB:EOG4XD3QH CTD:1184 KO:K05014 OMA:SYNGGGI
EMBL:Z56277 EMBL:D50497 IPI:IPI00326242 RefSeq:NP_058802.1
UniGene:Rn.10337 ProteinModelPortal:P51796 SMR:P51796 STRING:P51796
PhosphoSite:P51796 PRIDE:P51796 Ensembl:ENSRNOT00000003895
GeneID:25749 KEGG:rno:25749 UCSC:RGD:2362 InParanoid:P51796
NextBio:607935 ArrayExpress:P51796 Genevestigator:P51796
GermOnline:ENSRNOG00000002862 Uniprot:P51796
Length = 746
Score = 99 (39.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
+W L K+V T G + GL+ PS+ + + I N
Sbjct: 428 MWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWGIFN 487
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
S P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 488 SWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 539
Score = 75 (31.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 35/158 (22%), Positives = 56/158 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN----GFSLMMENNRERKIXXXXXXXXXXX 243
IK I + + +G SLG EGP V + C N F+ +N +R+
Sbjct: 193 IKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFNKYRKNEAKRR-EVLSAAAAAGV 251
Query: 244 XXXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
+ G F++E V PL+ F + F V
Sbjct: 252 SVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVL---FYV 308
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTK 338
+ EL +++LG+ G+ +F R +AW K
Sbjct: 309 EFHTPWHLFELVPFIVLGIFGGLWGALFIRTNIAWCRK 346
>UNIPROTKB|Q9GKE7 [details] [associations]
symbol:CLCN5 "H(+)/Cl(-) exchange transporter 5"
species:9823 "Sus scrofa" [GO:0006897 "endocytosis" evidence=ISS]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0015297 "antiporter
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR002247
InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762
PRINTS:PR01116 PROSITE:PS51371 SMART:SM00116 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0000139 GO:GO:0045177
GO:GO:0006897 GO:GO:0010008 GO:GO:0015297 CTD:181000 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 GeneTree:ENSGT00620000087693
HOVERGEN:HBG050984 KO:K05014 OMA:SYNGGGI EMBL:AF274055
RefSeq:NP_999304.1 UniGene:Ssc.15916 ProteinModelPortal:Q9GKE7
SMR:Q9GKE7 TCDB:2.A.49.2.2 Ensembl:ENSSSCT00000026087 GeneID:397263
KEGG:ssc:397263 Uniprot:Q9GKE7
Length = 746
Score = 99 (39.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
+W L K+V T G + GL+ PS+ + + I N
Sbjct: 428 MWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWAIFN 487
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
S P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 488 SWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 539
Score = 74 (31.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 35/158 (22%), Positives = 56/158 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN----GFSLMMENNRERKIXXXXXXXXXXX 243
IK I + + +G SLG EGP V + C N F+ +N +R+
Sbjct: 193 IKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFNKYRKNEAKRR-EVLSAAAAAGV 251
Query: 244 XXXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
+ G F++E V PL+ F + F V
Sbjct: 252 SVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVL---FYV 308
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTK 338
+ EL +++LG+ G+ +F R +AW K
Sbjct: 309 EFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRK 346
>UNIPROTKB|P76175 [details] [associations]
symbol:clcB "chloride ion transporter ClcB" species:83333
"Escherichia coli K-12" [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0010447 "response to acidity" evidence=IEA]
[GO:0005247 "voltage-gated chloride channel activity" evidence=IEA]
[GO:0034765 "regulation of ion transmembrane transport"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0005244
"voltage-gated ion channel activity" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] HAMAP:MF_01203 InterPro:IPR001807
InterPro:IPR014743 InterPro:IPR023790 Pfam:PF00654 PRINTS:PR00762
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0034707 GO:GO:0010447 eggNOG:COG0038
GO:GO:0005247 Gene3D:1.10.3080.10 SUPFAM:SSF81340 KO:K03281
PIR:B64915 RefSeq:NP_416109.2 RefSeq:YP_489855.1
ProteinModelPortal:P76175 SMR:P76175 DIP:DIP-28065N IntAct:P76175
EnsemblBacteria:EBESCT00000000688 EnsemblBacteria:EBESCT00000015109
GeneID:12930124 GeneID:947179 KEGG:ecj:Y75_p1568 KEGG:eco:b1592
PATRIC:32118486 EchoBASE:EB3609 EcoGene:EG13848
HOGENOM:HOG000230177 OMA:TTHLLNG ProtClustDB:PRK01610
BioCyc:EcoCyc:YNFJ-MONOMER BioCyc:ECOL316407:JW5263-MONOMER
Genevestigator:P76175 Uniprot:P76175
Length = 418
Score = 95 (38.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 370 PGILYWGFTNVEEILHTGKTASAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIX 429
P + G++ V+ L TA P + ++ + K+ A GSG GG++ P+L I
Sbjct: 275 PAVWGNGYSTVQSFL----TAP-PLLMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIG 329
Query: 430 XXXXXXXXXXXXEIINSAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRD 489
+ P + L GMA LA+ P+ S L++ E+T +
Sbjct: 330 LAIGMLYGRS----LGLWFPDGEEIT--LLLGLTGMATLLAATTHAPIMSTLMICEMTGE 383
Query: 490 YRILLPLM 497
Y++L L+
Sbjct: 384 YQLLPGLL 391
Score = 72 (30.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/135 (22%), Positives = 59/135 (43%)
Query: 105 VAFFNKGVHIIHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMM-HGLLEI 163
VA F + ++ EW + N+ + + W R LL P GG+ G++ G +
Sbjct: 19 VAGFRHAMLLL-EWLFLN--NDSGSLVNAATNLSPWRR-LLTPALGGLAAGLLLMGWQKF 74
Query: 164 LNQIKQS-----SSLDRQG-FDLVAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCA 217
Q + +L G FD A + +K++ + + + +G ++G EG + + A
Sbjct: 75 TQQRPHAPTDYMEALQTDGQFDYAASL---VKSLASLLVVTSGSAIGREGAMILLAALAA 131
Query: 218 NGFSLMMENNRERKI 232
+ F+ +E K+
Sbjct: 132 SCFAQRFTPRQEWKL 146
>UNIPROTKB|F1PZE9 [details] [associations]
symbol:CLCN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045177 "apical part of cell" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005247 "voltage-gated chloride channel
activity" evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002247 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01116 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0045177 GO:GO:0006897 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 GeneTree:ENSGT00620000087693
OMA:SYNGGGI EMBL:AAEX03026345 EMBL:AAEX03026348 EMBL:AAEX03026346
EMBL:AAEX03026347 Ensembl:ENSCAFT00000025340 Uniprot:F1PZE9
Length = 816
Score = 99 (39.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
+W L K+V T G + GL+ PS+ + + I N
Sbjct: 498 MWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWAIFN 557
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
S P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 558 SWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 609
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/158 (22%), Positives = 56/158 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN----GFSLMMENNRERKIXXXXXXXXXXX 243
IK I + + +G SLG EGP V + C N F+ +N +R+
Sbjct: 263 IKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFNKYRKNEAKRR-EVLSAAAAAGV 321
Query: 244 XXXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
+ G F++E V PL+ F + F V
Sbjct: 322 SVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVL---FYV 378
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTK 338
+ EL +++LG+ G+ +F R +AW K
Sbjct: 379 EFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRK 416
>UNIPROTKB|F1MN45 [details] [associations]
symbol:CLCN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045177 "apical part of cell" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005247 "voltage-gated chloride channel activity"
evidence=IEA] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002247 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01116 PROSITE:PS51371 SMART:SM00116
GO:GO:0016021 GO:GO:0045177 GO:GO:0006897 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 GeneTree:ENSGT00620000087693
OMA:SYNGGGI EMBL:DAAA02073095 IPI:IPI00700500
Ensembl:ENSBTAT00000001973 Uniprot:F1MN45
Length = 817
Score = 99 (39.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
+W L K+V T G + GL+ PS+ + + I N
Sbjct: 498 MWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWAIFN 557
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
S P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 558 SWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 609
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/158 (22%), Positives = 56/158 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN----GFSLMMENNRERKIXXXXXXXXXXX 243
IK I + + +G SLG EGP V + C N F+ +N +R+
Sbjct: 263 IKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFNKYRKNEAKRR-EVLSAAAAAGV 321
Query: 244 XXXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
+ G F++E V PL+ F + F V
Sbjct: 322 SVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVL---FYV 378
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTK 338
+ EL +++LG+ G+ +F R +AW K
Sbjct: 379 EFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRK 416
>UNIPROTKB|P51795 [details] [associations]
symbol:CLCN5 "H(+)/Cl(-) exchange transporter 5"
species:9606 "Homo sapiens" [GO:0005247 "voltage-gated chloride
channel activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0045177
"apical part of cell" evidence=IDA] [GO:0005254 "chloride channel
activity" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007588
"excretion" evidence=TAS] InterPro:IPR000644 InterPro:IPR001807
InterPro:IPR002247 InterPro:IPR014743 Pfam:PF00571 Pfam:PF00654
PRINTS:PR00762 PRINTS:PR01116 PROSITE:PS51371 SMART:SM00116
GO:GO:0005524 GO:GO:0000139 GO:GO:0005887 GO:GO:0045177
GO:GO:0006897 GO:GO:0007588 GO:GO:0010008 GO:GO:0015297
GO:GO:0005254 eggNOG:COG0038 GO:GO:0005247 Gene3D:1.10.3080.10
SUPFAM:SSF81340 HOGENOM:HOG000164493 HOVERGEN:HBG050984
OrthoDB:EOG4XD3QH EMBL:X91906 EMBL:AK056560 EMBL:AL663118
EMBL:BC130429 EMBL:BC130431 EMBL:X81836 EMBL:BK000969
IPI:IPI00294056 PIR:I37277 RefSeq:NP_000075.1 RefSeq:NP_001121370.1
UniGene:Hs.166486 PDB:2J9L PDB:2JA3 PDBsum:2J9L PDBsum:2JA3
ProteinModelPortal:P51795 SMR:P51795 DIP:DIP-29263N STRING:P51795
DMDM:1705908 PaxDb:P51795 PRIDE:P51795 DNASU:1184
Ensembl:ENST00000307367 Ensembl:ENST00000376088
Ensembl:ENST00000376091 Ensembl:ENST00000376108 GeneID:1184
KEGG:hsa:1184 UCSC:uc004dos.1 CTD:1184 GeneCards:GC0XP049687
HGNC:HGNC:2023 HPA:HPA000401 MIM:300008 MIM:300009 MIM:300554
MIM:308990 MIM:310468 neXtProt:NX_P51795 Orphanet:93622
PharmGKB:PA26550 InParanoid:P51795 KO:K05014 OMA:SYNGGGI
PhylomeDB:P51795 EvolutionaryTrace:P51795 GenomeRNAi:1184
NextBio:4894 Bgee:P51795 CleanEx:HS_CLCN5 Genevestigator:P51795
GermOnline:ENSG00000171365 Uniprot:P51795
Length = 746
Score = 98 (39.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/112 (25%), Positives = 46/112 (41%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXE---------IIN 445
+W L K+V T G + GL+ PS+ + + + N
Sbjct: 428 MWQLALTLILKIVITIFTFGMKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHQEWTVFN 487
Query: 446 SAIPGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
S P YA+VG AA L V + ++ V+++FELT ++PLM
Sbjct: 488 SWCSQGADCITPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 539
Score = 74 (31.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/158 (22%), Positives = 56/158 (35%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN----GFSLMMENNRERKIXXXXXXXXXXX 243
IK I + + +G SLG EGP V + C N F+ +N +R+
Sbjct: 193 IKTITLVLAVSSGLSLGKEGPLVHVACCCGNILCHCFNKYRKNEAKRR-EVLSAAAAAGV 251
Query: 244 XXXXXXXVAGCFFAIETVLR--PLRAENSPPFTTAMXXXXXXXXXXXXXXXXXXXXAFTV 301
+ G F++E V PL+ F + F V
Sbjct: 252 SVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVL---FYV 308
Query: 302 PSYDLKSAAELPLYLILGMLCGVVSVVFTRL-VAWFTK 338
+ EL +++LG+ G+ +F R +AW K
Sbjct: 309 EFHTPWHLFELVPFILLGIFGGLWGALFIRTNIAWCRK 346
>ZFIN|ZDB-GENE-091113-15 [details] [associations]
symbol:si:dkey-22f5.8 "si:dkey-22f5.8" species:7955
"Danio rerio" [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005247 "voltage-gated chloride channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000644 InterPro:IPR001807 InterPro:IPR014743
Pfam:PF00571 Pfam:PF00654 PRINTS:PR00762 PROSITE:PS51371
SMART:SM00116 ZFIN:ZDB-GENE-091113-15 GO:GO:0016021 GO:GO:0005247
Gene3D:1.10.3080.10 SUPFAM:SSF81340 GeneTree:ENSGT00620000087693
EMBL:BX511168 IPI:IPI00993082 Ensembl:ENSDART00000138664
Uniprot:F1QXU8
Length = 784
Score = 88 (36.0 bits), Expect = 0.00065, Sum P(4) = 0.00064
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 395 IWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIXXXXXXXXXXXXXEII----NSAI-- 448
+W L+ K++ T + G L GL+ PS+ + ++ + I
Sbjct: 466 MWQLSLALIFKMLITVVTFGMKLPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWVIFR 525
Query: 449 ----PGNVAVAEPQAYALVGMAATLASVCSVPLTSVLLLFELTRDYRILLPLM 497
PG + P YA+VG A L V + ++ V+++FELT ++PLM
Sbjct: 526 GWCSPGADCIT-PGLYAMVGATACLGGVTRMTVSLVVIMFELTGGLEYIVPLM 577
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(4) = 0.00064
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 188 IKAIQAAVTLGTGCSLGPEGPSVDIGKSCAN 218
IK I + + +G SLG EGP V + CAN
Sbjct: 257 IKTITLVLAVSSGLSLGKEGPLVHVACCCAN 287
Score = 46 (21.3 bits), Expect = 0.00065, Sum P(4) = 0.00064
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 128 AAWLRLQRLADT---WHRILLIPVTGGVIVGMMHGLLEILNQIKQSSSLDRQGF 178
+ W L+R++D W +LL+ + G + G + + +K+ L+ GF
Sbjct: 107 STWALLKRISDAFSGWLLMLLVGLMSGALAGGIDISAHWMTDLKEGVCLN--GF 158
Score = 41 (19.5 bits), Expect = 0.00065, Sum P(4) = 0.00064
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 311 ELPLYLILGMLCGVVSVVFTRLVAWFTK 338
EL +++LG+ G+ F R W+ +
Sbjct: 355 ELIPFILLGIFGGIWGAFFIRANIWWCR 382
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 497 418 0.00082 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 50
No. of states in DFA: 622 (66 KB)
Total size of DFA: 257 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.82u 0.10s 29.92t Elapsed: 00:00:02
Total cpu time: 29.83u 0.10s 29.93t Elapsed: 00:00:02
Start: Tue May 21 05:44:50 2013 End: Tue May 21 05:44:52 2013