Query 010950
Match_columns 497
No_of_seqs 193 out of 778
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 17:40:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yqc_A UDP-N-acetylglucosamine 100.0 1E-109 5E-114 889.2 44.1 463 23-495 4-486 (486)
2 1jv1_A Glcnac1P uridyltransfer 100.0 6E-106 2E-110 864.5 47.4 464 23-495 1-492 (505)
3 3oc9_A UDP-N-acetylglucosamine 100.0 9E-105 3E-109 828.6 36.3 375 105-495 21-404 (405)
4 3ogz_A UDP-sugar pyrophosphory 100.0 2.3E-91 7.7E-96 754.2 32.4 412 24-457 8-476 (630)
5 3r3i_A UTP--glucose-1-phosphat 100.0 1E-85 3.6E-90 700.2 20.2 368 36-444 52-431 (528)
6 3gue_A UTP-glucose-1-phosphate 100.0 5.8E-82 2E-86 667.2 24.3 347 65-444 30-391 (484)
7 2oeg_A UTP-glucose-1-phosphate 100.0 1.6E-76 5.3E-81 633.5 17.4 381 52-472 17-419 (505)
8 2i5k_A UTP--glucose-1-phosphat 100.0 1.7E-73 5.7E-78 610.3 20.3 400 40-495 20-433 (488)
9 2icy_A Probable UTP-glucose-1- 100.0 1.3E-71 4.4E-76 592.7 22.1 376 60-483 22-403 (469)
10 3st8_A Bifunctional protein GL 99.6 1.2E-13 4.1E-18 148.2 20.0 256 118-457 11-273 (501)
11 3oam_A 3-deoxy-manno-octuloson 99.1 1.4E-09 4.8E-14 106.3 13.6 189 119-368 2-197 (252)
12 4ecm_A Glucose-1-phosphate thy 99.0 1.3E-08 4.4E-13 100.1 18.0 181 118-366 23-206 (269)
13 1fxo_A Glucose-1-phosphate thy 98.8 6.6E-08 2.3E-12 96.7 16.4 183 119-367 2-187 (293)
14 1mc3_A Glucose-1-phosphate thy 98.8 1.4E-07 5E-12 94.4 17.9 181 120-366 4-187 (296)
15 1lvw_A Glucose-1-phosphate thy 98.8 2.4E-07 8.1E-12 92.8 18.4 182 120-367 4-188 (295)
16 3k8d_A 3-deoxy-manno-octuloson 98.8 5.4E-08 1.8E-12 96.1 12.9 186 119-368 18-213 (264)
17 3juk_A UDP-glucose pyrophospho 98.7 1.8E-07 6.3E-12 92.2 16.3 186 120-366 3-217 (281)
18 2v0h_A Bifunctional protein GL 98.7 6.6E-07 2.3E-11 93.7 20.6 180 118-368 4-185 (456)
19 3pnn_A Conserved domain protei 98.7 1.4E-07 4.7E-12 94.7 14.4 208 119-367 5-229 (303)
20 4fce_A Bifunctional protein GL 98.7 4.2E-07 1.4E-11 95.4 18.6 179 119-369 8-189 (459)
21 3tqd_A 3-deoxy-manno-octuloson 98.7 1E-07 3.4E-12 93.8 12.6 186 119-368 9-206 (256)
22 2qh5_A PMI, ALGA, mannose-6-ph 98.7 2.4E-07 8.3E-12 93.0 14.7 191 119-368 4-203 (308)
23 1tzf_A Glucose-1-phosphate cyt 98.6 3.8E-07 1.3E-11 88.3 14.1 190 120-364 3-200 (259)
24 3brk_X Glucose-1-phosphate ade 98.6 1E-06 3.4E-11 92.0 17.4 197 119-368 12-221 (420)
25 1hm9_A GLMU, UDP-N-acetylgluco 98.6 9.1E-07 3.1E-11 93.2 16.0 182 120-368 12-194 (468)
26 1h7e_A 3-deoxy-manno-octuloson 98.6 1E-06 3.5E-11 84.6 14.9 178 119-367 2-187 (245)
27 4fcu_A 3-deoxy-manno-octuloson 98.5 1.4E-06 4.8E-11 85.4 13.6 183 120-367 2-197 (253)
28 2pa4_A UTP-glucose-1-phosphate 98.5 9.4E-07 3.2E-11 89.3 12.5 185 120-366 13-228 (323)
29 1yp2_A Glucose-1-phosphate ade 98.4 4.8E-06 1.6E-10 87.5 17.8 210 119-368 20-245 (451)
30 4evw_A Nucleoside-diphosphate- 98.4 5.2E-07 1.8E-11 88.3 9.0 171 122-361 2-180 (255)
31 2y6p_A 3-deoxy-manno-octuloson 98.4 2.2E-06 7.7E-11 81.5 13.0 177 119-368 2-182 (234)
32 2x65_A Mannose-1-phosphate gua 98.4 2.1E-06 7.1E-11 87.6 13.2 191 121-368 3-205 (336)
33 2e3d_A UTP--glucose-1-phosphat 98.4 3.3E-06 1.1E-10 84.1 14.4 184 119-366 8-228 (302)
34 2ux8_A Glucose-1-phosphate uri 98.4 2E-06 7E-11 85.5 12.6 185 118-366 13-226 (297)
35 1vic_A 3-deoxy-manno-octuloson 98.3 1.1E-05 3.7E-10 78.6 16.1 186 119-367 2-200 (262)
36 1ezi_A CMP-N-acetylneuraminic 98.2 7.3E-06 2.5E-10 77.9 11.8 134 119-306 4-138 (228)
37 2cu2_A Putative mannose-1-phos 98.2 7.5E-06 2.6E-10 83.4 11.8 188 120-368 3-202 (337)
38 1jyk_A LICC protein, CTP:phosp 98.1 5.9E-06 2E-10 80.5 9.5 41 119-162 25-68 (254)
39 1qwj_A Cytidine monophospho-N- 98.1 2.2E-05 7.5E-10 75.0 13.1 135 119-308 3-138 (229)
40 3f1c_A Putative 2-C-methyl-D-e 98.1 2.3E-05 8E-10 75.7 12.9 128 119-296 3-136 (246)
41 2xwl_A 2-C-methyl-D-erythritol 98.1 2E-05 6.9E-10 74.1 11.6 41 119-162 2-42 (223)
42 3q80_A 2-C-methyl-D-erythritol 98.1 2.8E-05 9.5E-10 75.1 12.6 170 118-368 6-179 (231)
43 2waw_A MOBA relate protein; un 98.1 3E-05 1E-09 71.4 11.9 104 119-279 5-109 (199)
44 2ggo_A 401AA long hypothetical 98.0 0.00012 4E-09 75.4 15.8 167 121-366 2-171 (401)
45 2vsh_A TARI, 2-C-methyl-D-eryt 98.0 5.1E-05 1.7E-09 71.9 12.1 65 120-202 3-68 (236)
46 3rsb_A Adenosylcobinamide-phos 97.9 3.1E-05 1.1E-09 71.7 9.6 128 121-304 2-136 (196)
47 1vpa_A 2-C-methyl-D-erythritol 97.9 2.6E-05 8.8E-10 74.2 8.2 41 119-162 13-53 (234)
48 2wee_A MOBA-related protein; u 97.9 7.3E-05 2.5E-09 68.8 10.5 62 119-202 5-66 (197)
49 3d5n_A Q97W15_sulso; NESG, SSR 97.8 2.7E-05 9.2E-10 72.7 7.3 38 119-161 2-39 (197)
50 3ngw_A Molybdopterin-guanine d 97.8 0.00022 7.4E-09 67.6 12.3 36 121-161 2-37 (208)
51 2yc3_A 2-C-methyl-D-erythritol 97.6 8.4E-05 2.9E-09 70.3 6.2 41 119-162 4-44 (228)
52 1vgw_A 4-diphosphocytidyl-2C-m 97.5 6.1E-05 2.1E-09 71.3 4.9 41 118-161 5-45 (231)
53 1i52_A 4-diphosphocytidyl-2-C- 97.4 0.0001 3.4E-09 70.3 4.3 40 119-161 7-46 (236)
54 2px7_A 2-C-methyl-D-erythritol 97.3 0.00013 4.5E-09 70.0 3.9 38 118-159 24-61 (236)
55 1e5k_A Molybdopterin-guanine d 97.2 0.00023 7.8E-09 66.7 4.5 39 119-161 6-44 (201)
56 2xme_A CTP-inositol-1-phosphat 97.1 0.00044 1.5E-08 65.7 5.9 39 119-161 18-56 (232)
57 2e8b_A Probable molybdopterin- 96.8 0.00018 6.1E-09 67.3 0.1 38 119-161 14-51 (201)
58 1w55_A ISPD/ISPF bifunctional 96.8 0.00079 2.7E-08 69.5 4.9 40 119-161 3-42 (371)
59 2dpw_A Hypothetical protein TT 96.0 0.004 1.4E-07 59.2 3.8 40 119-162 2-44 (232)
60 3h8q_A Thioredoxin reductase 3 47.1 32 0.0011 28.2 5.7 49 192-264 54-102 (114)
61 3l4n_A Monothiol glutaredoxin- 34.1 43 0.0015 28.4 4.5 63 191-277 53-116 (127)
62 3ipz_A Monothiol glutaredoxin- 32.5 54 0.0019 26.6 4.8 48 192-263 57-104 (109)
63 2wul_A Glutaredoxin related pr 23.8 41 0.0014 28.4 2.5 52 192-267 60-112 (118)
No 1
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=100.00 E-value=1.5e-109 Score=889.17 Aligned_cols=463 Identities=39% Similarity=0.681 Sum_probs=425.2
Q ss_pred CCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcC-ChHHHHHHHHHHHhcCCC-CC-CCcccCCCCCccccccC
Q 010950 23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESL-DLPRVDRIIRCSLRSQGL-PV-AAIEPVPERSVSTVEER 99 (497)
Q Consensus 23 ~~~~~l~~~l~~~gQ~Hll~~~~~l~~~ek~~l~~ql~~i-D~~~~~~~~~~~l~~~~~-~~-~~~~p~p~~~~~~~~~~ 99 (497)
.+.++|+++|+++||+|||+||++|+++||++|++||+++ |++.+..+++++...+.. .. ..++|+|++.+.++.+.
T Consensus 4 ~~~~~l~~~l~~~gQ~hl~~~~~~l~~~ek~~l~~ql~~~~d~~~l~~~~~~~~~~~~~~~~~~~i~p~p~~~~~~~~~~ 83 (486)
T 2yqc_A 4 KSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQTNSTSRNFTQLPNEQTASTLDL 83 (486)
T ss_dssp CCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTC----CCCEECCCGGGEEETTTS
T ss_pred hhHHHHHHHHHHcCcHHHhhhhccCCHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccccccccccccCCChhhccccccC
Confidence 4568999999999999999999999999999999999999 999999999888765432 22 24899999888888887
Q ss_pred ChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 010950 100 TMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGS 179 (497)
Q Consensus 100 ~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~ 179 (497)
+.+++++|++.|+++|++||+|+|+||||+|||||+++||||+||++|+||||||+++++|+++++++.+.++. ...
T Consensus 84 ~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~---~~~ 160 (486)
T 2yqc_A 84 SKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKS---TKK 160 (486)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTC---SSC
T ss_pred ChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCC---CcC
Confidence 77888999999999999999999999999999999999999999999999999999999999999998766541 145
Q ss_pred cceeEEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCC-ceeecCCCccccccCCCchhhHhhhhccHH
Q 010950 180 AAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDG-RFIMETPYKVAKAPDGNGGVYSALKSSKLL 258 (497)
Q Consensus 180 ~~ipl~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g-~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l 258 (497)
+.||||||||++||+.|++||++|+|||++.++|+||+|+++||++.+| ++++++++.++|+|+||||+|.+|+++|+|
T Consensus 161 ~~ip~~ImtS~~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~L 240 (486)
T 2yqc_A 161 PIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGIL 240 (486)
T ss_dssp CCCEEEEEECGGGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHH
T ss_pred CccCEEEEECCCCHHHHHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcH
Confidence 7899999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCceEEEEEeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhh
Q 010950 259 EDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASA 338 (497)
Q Consensus 259 ~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~ 338 (497)
++|.++|++|++|+|+||+|++++||.|+|||+.++++++++|++|+.|+|++|++|++..+|+++|+||+|+++++++.
T Consensus 241 d~l~~~G~~yi~v~~vDN~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~ 320 (486)
T 2yqc_A 241 DDLNSKGIKHIHMYCVDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQELANK 320 (486)
T ss_dssp HHHHHHTCCEEEEEETTBTTCCTTCHHHHHHHHHHTCSEEEEEEECCSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHC
T ss_pred HHHHhcCCeEEEEECCCCceeeccCHHHHHHHHHcCCCEEEEEEEcCCCCCceeEEEEEecCCCEEEEEEecCCHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999986336899999999999998876
Q ss_pred ccccC--CcccccccceeeEEEehHHHHHHhhccccC---ccceeeecccCccCC---------CcccchhhhhHhhcCc
Q 010950 339 INQET--GRLRFCWSNVCLHMFTLDFLNQVANGLEKD---SVYHLAEKKIPSIHG---------QTVGFKLEQFIFDAFP 404 (497)
Q Consensus 339 ~~~~~--g~~~f~~gNi~~~~f~l~fL~~~~~~~~~~---lp~h~a~Kki~~~~~---------~~~~~klE~fifD~~~ 404 (497)
+++ + |.+.|+++|||||||+++||++++...... ||||+++|||||+|. .+||+|||+||||+|+
T Consensus 321 ~~~-~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~~~~~~~~lp~~v~~Kki~~~d~~~g~~~~p~~pn~~klE~~~~d~~~ 399 (486)
T 2yqc_A 321 KDP-QDSSKLFLRAANIVNHYYSVEFLNKMIPKWISSQKYLPFHIAKKKIPSLNLENGEFYKPTEPNGIKLEQFIFDVFP 399 (486)
T ss_dssp EET-TEEEEESSCEEEEEEEEEEHHHHHHHHHHHTTCTTTSCCEEEEECCCEECTTTCCEECCSSCCEEEEECCGGGGGG
T ss_pred ccc-cccccccccceeEEEEEEeHHHHHHHHHhhcCcccCCcceEeccccCccccccCeeccCCCCCeeeeeehHhhHHh
Confidence 642 3 678899999999999999999966555556 999999999999873 3689999999999999
Q ss_pred CCC--ceeEEEEecCccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCceeccCCCCccCeEEecccCcccccchhh
Q 010950 405 YAP--STALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEA 482 (497)
Q Consensus 405 ~~~--~~~~~~V~R~~eFsPvKn~~g~~~dsp~ta~~~l~~~~~~~l~~~G~~~~~~~~~~~~~ieispl~sy~Ge~l~~ 482 (497)
+++ ++.+++|+|++|||||||++|...|||+|||++|+++|+|||++||+.+..+ .+|||||++||+||||+
T Consensus 400 ~~~l~~~~~~~V~R~~~FsPvKn~~~~~~dsp~ta~~~l~~~~~~~l~~aG~~~~~~-----~~~eisp~~sy~ge~l~- 473 (486)
T 2yqc_A 400 SVELNKFGCLEVDRLDEFSPLKNADGAKNDTPTTCRNHYLERSSKWVIQNGGVIDNQ-----GLVEVDSKTSYGGEGLE- 473 (486)
T ss_dssp GSCGGGEEEEEECHHHHCCBCCSCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEECTT-----CCCBCCTTTCSSSTTCG-
T ss_pred hcccCceEEEEECcccceeeecCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCeecCC-----CcEEEcceeeECCCCch-
Confidence 999 9999999999999999999998899999999999999999999999988532 35999999999999999
Q ss_pred hhCCceecCCccc
Q 010950 483 ICRGRTFHAPCEI 495 (497)
Q Consensus 483 ~~~~~~~~~p~~i 495 (497)
+++||+|+.|.+|
T Consensus 474 ~~~~~~~~~~~~~ 486 (486)
T 2yqc_A 474 FVNGKHFKNGDII 486 (486)
T ss_dssp GGTTCEECTTCBC
T ss_pred hhcCccccCCccC
Confidence 6699999999875
No 2
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=100.00 E-value=5.5e-106 Score=864.48 Aligned_cols=464 Identities=43% Similarity=0.718 Sum_probs=424.5
Q ss_pred CCHHHHHHHHHHCCCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhc-CC-----CCCCCcccCCCCCcccc
Q 010950 23 PPPQALLERLKDYGQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRS-QG-----LPVAAIEPVPERSVSTV 96 (497)
Q Consensus 23 ~~~~~l~~~l~~~gQ~Hll~~~~~l~~~ek~~l~~ql~~iD~~~~~~~~~~~l~~-~~-----~~~~~~~p~p~~~~~~~ 96 (497)
|+.++|+++|+++||+|||+||++|+++||++|++||+++|++.+..+|+++++. .. ...+.++|+|++.+.++
T Consensus 1 ~~~~~l~~~l~~~gQ~hl~~~~~~l~~~ek~~l~~ql~~~d~~~~~~~~~~~~~~~~~s~~~~~~~~~i~p~p~~~~~~~ 80 (505)
T 1jv1_A 1 MNINDLKLTLSKAGQEHLLRFWNELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNVDARMEPVPREVLGSA 80 (505)
T ss_dssp CCHHHHHHHHHHTTCGGGGTTGGGSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHCC-----------CCBCCCGGGEEET
T ss_pred CCHHHHHHHHHHcCcHHHHhhhhcCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhhhccccCcccccccCCChHhcccc
Confidence 4568899999999999999999999999999999999999999999999988753 11 12356899999888888
Q ss_pred ccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCC
Q 010950 97 EERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGG 176 (497)
Q Consensus 97 ~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~ 176 (497)
.+ +.++..+|++.|+++|+.||+|+|+||||+|||||+++||+|+||++++||||||+++++|+++|+++.+.++
T Consensus 81 ~~-~~~~~~~~~~~Gl~~i~~~kvavViLAGG~GTRLg~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G---- 155 (505)
T 1jv1_A 81 TR-DQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYG---- 155 (505)
T ss_dssp TT-TGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHS----
T ss_pred cC-ChHHHHHHHHHhHHhhccCceEEEEEcCCccccCCCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcC----
Confidence 76 5667889999999999999999999999999999999999999999999999999999999999999876654
Q ss_pred CCCcceeEEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhcc
Q 010950 177 SGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSK 256 (497)
Q Consensus 177 ~~~~~ipl~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg 256 (497)
..+.|||+||||++||+.|++||++|+|||+++++|++|.|+++||++.+|++++++++.++++|+||||+|.+|..+|
T Consensus 156 -~~~~ip~vImtS~~t~e~t~~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg 234 (505)
T 1jv1_A 156 -NKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQN 234 (505)
T ss_dssp -SCCCCCEEEEECTTTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTT
T ss_pred -CCccceEEEEecCCCHHHHHHHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcC
Confidence 2467999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCceEEEEEeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhh
Q 010950 257 LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLA 336 (497)
Q Consensus 257 ~l~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~ 336 (497)
++++|.++|++|++|+|+||+|++++||.|+|||+.++++++++|++|+.+++++|+||.+ +|+++|+||+|+|++.+
T Consensus 235 ~L~~l~~~g~e~~~V~n~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~~e~~Gvl~~~--dg~~~vvEy~E~p~~~~ 312 (505)
T 1jv1_A 235 IVEDMEQRGIWSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRV--DGVYQVVEYSEISLATA 312 (505)
T ss_dssp HHHHHHHTTCCEEEEEETTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGSCHHHH
T ss_pred cHHHHHhcCCCEEEEEECCccccccchHHHHHHHHHcCCCEEEEEEEccCCccCcceEEEE--CCeEEEEEEeeCCHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999997 68999999999999988
Q ss_pred hhccccCCcccccccceeeEEEehHHHHHHhhccccCccceeeecccCccCC--------CcccchhhhhHhhcCcCCCc
Q 010950 337 SAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHG--------QTVGFKLEQFIFDAFPYAPS 408 (497)
Q Consensus 337 ~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~~~~~~~~lp~h~a~Kki~~~~~--------~~~~~klE~fifD~~~~~~~ 408 (497)
+.++ ++|.+.|+++|||||||+++||+++.......||||+++||+||+|+ .+||+|||+||||+|+++++
T Consensus 313 ~~~~-~~g~~~~~~~N~~~~~f~l~~L~~i~~~~~~~l~~hv~~Kkip~~d~~g~~v~P~~pn~~klE~~i~d~~~~~~~ 391 (505)
T 1jv1_A 313 QKRS-SDGRLLFNAGNIANHFFTVPFLRDVVNVYEPQLQHHVAQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKK 391 (505)
T ss_dssp HCBC-TTSSBSSCEEEEEEEEEEHHHHHHHHHTTGGGCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSS
T ss_pred hhcc-cccccccceeeEEEEEecHHHHHHHHHhhcccCCceecccccccccCCCCCcCCCCCCceeHHHHHHHHHhhcCc
Confidence 7665 46788899999999999999999998766668999999999999874 36899999999999999999
Q ss_pred eeEEEEecCccccccccCCCCC-CCCHHHHHHHHHHHHHHHHHHcCceeccCC-------------CCccCeEEecccCc
Q 010950 409 TALFEVLREEEFAPVKNANGSN-FDTPDSARLLVLRLHTRWVIAAGGFLTHSV-------------PLYATGVEVSPLCS 474 (497)
Q Consensus 409 ~~~~~V~R~~eFsPvKn~~g~~-~dsp~ta~~~l~~~~~~~l~~~G~~~~~~~-------------~~~~~~ieispl~s 474 (497)
+.+++|+|++||+||||++|.. .|||+|||+||+++|+|||++||+.+..+. ......|||||++|
T Consensus 392 ~~~~~V~R~~~FsPvKn~~~~~~~dsp~ta~~~l~~~~~~~l~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~Eisp~~s 471 (505)
T 1jv1_A 392 FVVYEVLREDEFSPLKNADSQNGKDNPTTARHALMSLHHCWVLNAGGHFIDENGSRLPAIPRLKDANDVPIQCEISPLIS 471 (505)
T ss_dssp EEEEEECHHHHCCBCCSCTTSSSSSSHHHHHHHHHHHHHHHHHHTTCEEBCTTCCBCCSSCCCCSTTCCCCCEEECTTTC
T ss_pred eEEEEECcccceeeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCeecccccccccccccccccccCCCeEEECCccc
Confidence 9999999999999999999987 899999999999999999999999883111 00124699999999
Q ss_pred ccccchhhhhCCceecCCccc
Q 010950 475 YAGENLEAICRGRTFHAPCEI 495 (497)
Q Consensus 475 y~Ge~l~~~~~~~~~~~p~~i 495 (497)
|+||||+++++||+|+.|.++
T Consensus 472 y~ge~l~~~~~~~~~~~~~~~ 492 (505)
T 1jv1_A 472 YAGEGLESYVADKEFHAPLII 492 (505)
T ss_dssp SSSCSCHHHHTTCEECSSEEE
T ss_pred cCCCCchHHhcCCccCCCcee
Confidence 999999999999999999986
No 3
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=100.00 E-value=9.3e-105 Score=828.64 Aligned_cols=375 Identities=35% Similarity=0.595 Sum_probs=354.7
Q ss_pred HHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhh-hcCCCCCCCccee
Q 010950 105 ERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQV-TSEGGGSGSAAIH 183 (497)
Q Consensus 105 ~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~-~~~~~~~~~~~ip 183 (497)
++|++.|+++|++||||||+||||||||||+++||+|+||++|+||||||+++++|+++|+++.++ ++ .++.||
T Consensus 21 ~~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~-----~~~~Ip 95 (405)
T 3oc9_A 21 KEHYYRGLELISQGKTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQ-----KNVMIH 95 (405)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCC-----SCCCCE
T ss_pred HHHHHHHHHHHhcCceEEEEecCCCcccccCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccc-----cCCCCC
Confidence 479999999999999999999999999999999999999999999999999999999999998765 32 467899
Q ss_pred EEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHH
Q 010950 184 WYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT 263 (497)
Q Consensus 184 l~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~ 263 (497)
|+||||++||+.|++||++|+|||+++++|++|.|+++||+|.+|+++++++++++|+|+||||+|.+|.++|+|++|.+
T Consensus 96 ~~IMtS~~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~ 175 (405)
T 3oc9_A 96 WFLMTNEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNE 175 (405)
T ss_dssp EEEEECTTTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEEeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccC
Q 010950 264 RGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQET 343 (497)
Q Consensus 264 ~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~ 343 (497)
+|++|++|+|+||+|++++||.|||||++++++++++|++|+.|+|++|+||++ ||+++|+||+|+|++ ++.++ .+
T Consensus 176 ~Gieyi~v~nvDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~dek~Gvl~~~--dg~~~vvEysei~~e-~e~~~-~~ 251 (405)
T 3oc9_A 176 KGIKYSVAHNVDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKE--QERIKVVEYTELTDE-LNKQL-SN 251 (405)
T ss_dssp HTCCEEEEECTTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCSTTCSCCEEEEE--TTEEEEECGGGCCTT-TTCBC-TT
T ss_pred cCCEEEEEEeCCCcccccCCHHHHHHHHHcCCCEEEEEEECCCCCCccceEEEE--CCeeEEEEEeeCCHH-HhhcC-CC
Confidence 999999999999999999999999999999999999999999999999999997 799999999999999 65554 57
Q ss_pred CcccccccceeeEEEehHHHHHHhhccccCccceeeecccCccCC--------CcccchhhhhHhhcCcCCCceeEEEEe
Q 010950 344 GRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHG--------QTVGFKLEQFIFDAFPYAPSTALFEVL 415 (497)
Q Consensus 344 g~~~f~~gNi~~~~f~l~fL~~~~~~~~~~lp~h~a~Kki~~~~~--------~~~~~klE~fifD~~~~~~~~~~~~V~ 415 (497)
|.+.|+++|||||+|+++||++++ +..||||+|+|||||+|. .+||+|||+||||+|++++++.+++|+
T Consensus 252 g~l~fn~~Ni~~h~fs~~fL~~i~---~~~l~~h~a~Kkip~~d~~g~~~~p~~~ngiklE~fifd~f~~~~~~~~~eV~ 328 (405)
T 3oc9_A 252 GEFIYNCGHISINGYSTSFLEKAA---EYQLPYHIAKKKVPFVNEQGIVIHPSENNGIKKEIFFFDVFPLATKVSIFEIQ 328 (405)
T ss_dssp SCBSSCEEEEEEEEEEHHHHHHHT---TCCCCCEEEEECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCSCEEEEECC
T ss_pred CceeeccceeEeeecCHHHHHHhh---hccCCcEEeccccCccCCCCCCcccCCcceeehHHHHHHHHHhccceEEEEEC
Confidence 899999999999999999999998 357999999999999873 379999999999999999999999999
Q ss_pred cCccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHcCceeccCCCCccCeEEecccCcccccchhhhhCCceecCCccc
Q 010950 416 REEEFAPVKNANGSNFDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEI 495 (497)
Q Consensus 416 R~~eFsPvKn~~g~~~dsp~ta~~~l~~~~~~~l~~~G~~~~~~~~~~~~~ieispl~sy~Ge~l~~~~~~~~~~~p~~i 495 (497)
|++|||||||++|.+.|||+|||++++++|++||+++|+.+.++.+ ..|||||++||+||||++ ++|++|+.|.++
T Consensus 329 R~~eF~PlKn~~g~~~dsp~tar~~l~~~~~~wl~~ag~~~~~~~~---~~~Eispl~sy~ge~l~~-~~~~~~~~p~~~ 404 (405)
T 3oc9_A 329 RFIEFSALKNSLNESFDNVNTVKRDWYRLNIYYLKKAGAIVDDSKS---PICEISFRKSFEEEGLKE-FKGKTIQLPFIL 404 (405)
T ss_dssp HHHHCCBCCCCTTSSSSSHHHHHHHHHHHHHHHHHHTTCEEECSSC---CCEEECTTTCSSSGGGGG-GTTCEEESCEEE
T ss_pred hHhcccceecCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEcCCCC---ccEEeCcccccCccCccc-cCCcEecCcccc
Confidence 9999999999999889999999999999999999999998875432 469999999999999999 699999999875
No 4
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=100.00 E-value=2.3e-91 Score=754.22 Aligned_cols=412 Identities=21% Similarity=0.239 Sum_probs=354.4
Q ss_pred CHHHHHHHHHH--CCCchhcccccc-CC--HHHHHHHHHHHhcCChHHH---HHHHH---HHHhc--CCCCCCCcccCCC
Q 010950 24 PPQALLERLKD--YGQEDAFALWDE-LS--PDERDHLVKDIESLDLPRV---DRIIR---CSLRS--QGLPVAAIEPVPE 90 (497)
Q Consensus 24 ~~~~l~~~l~~--~gQ~Hll~~~~~-l~--~~ek~~l~~ql~~iD~~~~---~~~~~---~~l~~--~~~~~~~~~p~p~ 90 (497)
+.++|+++|++ +||+|||+||++ |+ ++||++|++||..+|++++ ..+++ +++.+ ..++.+.++|+|.
T Consensus 8 ~~~~L~~~l~~~~~gQ~HLf~~w~~~l~~~~~e~~~L~~qL~~~d~~~~~gl~~~~~~a~~~l~~~~~~~~~~~~~p~P~ 87 (630)
T 3ogz_A 8 NLQALREELCTPGLDQGHLFEGWPETVDECNERQIALLTDLYMFSNMYPGGVAQYIRNGHELLARESEEVDFAALEMPPL 87 (630)
T ss_dssp HHHHHHHHHTSTTTCCGGGGTTCCSSGGGCCHHHHHHHHHHHHGGGTSTTHHHHHHHHHHHHHHHHTSCCCCSEEECCSC
T ss_pred hHHHHHHHhhhccCCchhhhhhcccccCCCHHHHHHHHHHHHhhChhhhhhHHHHHHHHHHHhhccccCCcccccccCCC
Confidence 45789999997 999999999999 99 9999999999999998764 34443 33432 2346688997764
Q ss_pred CCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhh
Q 010950 91 RSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQV 170 (497)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~ 170 (497)
......-+...+++.+|++.|+++|+ |+|||+||||||||||+++|||++|+++++++||||+++++|+ ++
T Consensus 88 ~~~~~~l~~~~~~~~~~~~~Gl~~i~--kvavvllaGGlGTRLG~~~pK~~lpv~~~s~ks~lql~~e~i~---~~---- 158 (630)
T 3ogz_A 88 IFEAPSLHRRTAERTALENAGTAMLC--KTVFVLVAGGLGERLGYSSIKVSLPVETATNTTYLAYYLRWAQ---RV---- 158 (630)
T ss_dssp EEECCCTTCCCHHHHHHHHHHHHHGG--GEEEEEECCCEEGGGTEEEEGGGSBSCTTTCCBHHHHHHHHHH---HH----
T ss_pred CCccccccCCHHHHHHHHHHhHHHHh--hceEEEecCCcccccCCCCCcccceecCCCCCcHHHHHHHHHH---HH----
Confidence 32222222345688999999999998 9999999999999999999999999999999999999999998 22
Q ss_pred hcCCCCCCCcceeEEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEEcCCcceee-cCCceeecCCCccccccCCCchhh
Q 010950 171 TSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVS-KDGRFIMETPYKVAKAPDGNGGVY 249 (497)
Q Consensus 171 ~~~~~~~~~~~ipl~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~-~~g~~~l~~~~~~~~~P~GhGgi~ 249 (497)
+++.||||||||+.||+.|++||++ ||+++++|+||+|+++||++ .+|+++++++++++|+|+||||+|
T Consensus 159 -------~g~~iPl~IMTS~~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~ 228 (630)
T 3ogz_A 159 -------GGKEVPFVIMTSDDTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVH 228 (630)
T ss_dssp -------HCTTCCEEEEECTTTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHH
T ss_pred -------hCCCCcEEEEecccchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHH
Confidence 3578999999999999999999998 99999999999999999996 789999999999999999999999
Q ss_pred Hhhhhcc------------------HHHHHHHcCceEEEEEeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCcc
Q 010950 250 SALKSSK------------------LLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKV 311 (497)
Q Consensus 250 ~aL~~sg------------------~l~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~v 311 (497)
.+|+++| +|++|.++|++|+||+||||+|++++||.||||++.++++|++||++| .|.|++
T Consensus 229 ~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r-~p~E~v 307 (630)
T 3ogz_A 229 SLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPISLALSAEHSLDMNFTCIPR-VPKEPI 307 (630)
T ss_dssp HHHHHCBC--------------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECC-CSSCSS
T ss_pred HHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHHhHHHHhcCCCEEEEEEEC-CCCcce
Confidence 9999999 999999999999999999999999999999999999999999999997 699999
Q ss_pred ceEEEe-cCCCCe---EEEEeccCChhhhhhccccCCc-------ccccccceeeEEEehHHHHHHhhccccCccceeee
Q 010950 312 GVFVRR-GKGGPL---TVVEYSELDPSLASAINQETGR-------LRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAE 380 (497)
Q Consensus 312 Gvi~~~-~~~g~~---~vvEYsel~~~~~~~~~~~~g~-------~~f~~gNi~~~~f~l~fL~~~~~~~~~~lp~h~a~ 380 (497)
|++|+. +.+|++ ++|||+|+++++++..+ .+|. +.|++||||||||+++++.+.+......+|.+++.
T Consensus 308 G~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~-~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~~~~~ip~~vNp 386 (630)
T 3ogz_A 308 GLLCRTKKNSGDPWLVANVEYNVFAEVSRALNK-DGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFINP 386 (630)
T ss_dssp CEEEEEESSTTSCCEEEEECHHHHHHHHHHC-------------CCCSSCEEEEEEEEEHHHHHHHHHHHTTCCCCEECC
T ss_pred eeEEEEecCCCceeeeeEEEeccCCHhHhhccC-CCccccccccccccccccceeeeEEHHHHHHHHHhccCccceecCC
Confidence 999985 347898 56999999999887543 2343 78889999999999997776665444678988877
Q ss_pred cccC-ccCCCcccchhhhhHhhcCcCCC----ceeEEEEecCccccccccCC---------CCCCCCHHHHHHHHHHHHH
Q 010950 381 KKIP-SIHGQTVGFKLEQFIFDAFPYAP----STALFEVLREEEFAPVKNAN---------GSNFDTPDSARLLVLRLHT 446 (497)
Q Consensus 381 Kki~-~~~~~~~~~klE~fifD~~~~~~----~~~~~~V~R~~eFsPvKn~~---------g~~~dsp~ta~~~l~~~~~ 446 (497)
|.+. .-+.+++++|||+||||++++++ ++.+++|+| .||+||||+. |.+.|||+||+.|+|++|+
T Consensus 387 K~~d~~~~~~~~~~qLEt~m~d~~~~F~~~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g~~~~sp~t~~~dly~~~~ 465 (630)
T 3ogz_A 387 KYSDETRRSFKKPARIESLMQDIALLFSEDDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYELQR 465 (630)
T ss_dssp CBSSSSSCCBSSCBCEECCGGGGGGGCCTTTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTTCCCCBHHHHHHHHHHHHH
T ss_pred cccCCcccccCcchhhhhHHHHHHHhccccCcceeEEEECC-CeeecccCChhHhhhhhccCCCcCChHHHHHHHHHHHH
Confidence 7542 12234689999999999766654 557899999 7999999997 8889999999999999999
Q ss_pred HHHHHcCceec
Q 010950 447 RWVIAAGGFLT 457 (497)
Q Consensus 447 ~~l~~~G~~~~ 457 (497)
+||++||+.++
T Consensus 466 ~~L~~aG~~v~ 476 (630)
T 3ogz_A 466 RRLKAIGLPLF 476 (630)
T ss_dssp HHHHHTTCCCC
T ss_pred HHHHHcCceec
Confidence 99999999886
No 5
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=100.00 E-value=1e-85 Score=700.20 Aligned_cols=368 Identities=20% Similarity=0.237 Sum_probs=323.1
Q ss_pred CCchhccccccCCHHHHHHHHHHHhcCChHHHHHHHHHHHhcC--CCCCCCcccCCCCCccccccCChHHHHHHHHHhhh
Q 010950 36 GQEDAFALWDELSPDERDHLVKDIESLDLPRVDRIIRCSLRSQ--GLPVAAIEPVPERSVSTVEERTMDERERWWKMGLK 113 (497)
Q Consensus 36 gQ~Hll~~~~~l~~~ek~~l~~ql~~iD~~~~~~~~~~~l~~~--~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~ 113 (497)
-|.||+++|++|++++|+.|.+|++. +..+|++++... ..+|+.|+|+|++.+.+++++. .|+..+..
T Consensus 52 ~~~~l~~~~~~l~~~~~~~~~~el~~-----f~~lf~r~l~~~~~~~~~~~i~p~p~~~~~~~~~l~-----~~~~~~~~ 121 (528)
T 3r3i_A 52 VKKELEKILTTASSHEFEHTKKDLDG-----FRKLFHRFLQEKGPSVDWGKIQRPPEDSIQPYEKIK-----ARGLPDNI 121 (528)
T ss_dssp TTSSSTTTSSSCCTTTTHHHHHHHHH-----HHHHHHHHHHC-------CCCCCCCTTTSEEHHHHT-----TSCCCCSS
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHH-----HHHHHHHHHhhccCCCCHHHCcCCCHHHccCHhhcC-----Cccccchh
Confidence 39999999999999999999999985 488899998754 3678999999999888877543 23444445
Q ss_pred hhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCch
Q 010950 114 AISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTD 193 (497)
Q Consensus 114 ~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~ 193 (497)
.+..+|||||+||||||||||+++|||++|+ ++||||||++++||+++++. +++.||||||||+.||
T Consensus 122 ~~~l~kvavvlLaGGlGTRLG~~~PK~~i~V--~sgktflql~~eqI~~l~~~-----------~g~~IPl~IMTS~~T~ 188 (528)
T 3r3i_A 122 SSVLNKLVVVKLNGGLGTSMGCKGPKSLIGV--RNENTFLDLTVQQIEHLNKT-----------YNTDVPLVLMNSFNTD 188 (528)
T ss_dssp CTTCTTEEEEEECCCBCTTTTCSSBGGGSEE--ETTEEHHHHHHHHHHHHHHH-----------HTCCCCEEEEECTTTH
T ss_pred hhhcCceEEEEeCCCCccccCCCCCccceec--CCCCcHHHHHHHHHHHHHHH-----------hCCCCCEEEEeccchh
Confidence 5677899999999999999999999999876 69999999999999999875 4678999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecC------CCccccccCCCchhhHhhhhccHHHHHHHcCce
Q 010950 194 DATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMET------PYKVAKAPDGNGGVYSALKSSKLLEDMATRGIK 267 (497)
Q Consensus 194 ~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~------~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~ 267 (497)
++|++||++|+||| .+|++|+|+++||++.+|+++++. +++++|+|+||||+|.+|+++|+|++|.++|+|
T Consensus 189 ~~T~~~f~k~~~fg---~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gie 265 (528)
T 3r3i_A 189 EDTKKILQKYNHCR---VKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKE 265 (528)
T ss_dssp HHHHSSCGGGTTSS---CCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCC
T ss_pred HHHHHHHHhcCccC---CCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCE
Confidence 99999999999999 489999999999999999999986 789999999999999999999999999999999
Q ss_pred EEEEEeCCcccccccCHHHHHHHhhc----CCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccC
Q 010950 268 YIDCYGVDNALVRVADPTFLGYFIDK----GVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQET 343 (497)
Q Consensus 268 yi~v~~vDN~L~~~~Dp~~lG~~~~~----~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~ 343 (497)
|++|+||||++++ +||.||||++.+ +++|++||++|+.|+|+||++|++ +|+++|+||+|+|++.+++ .+
T Consensus 266 yi~v~nvDNlga~-vDp~~Lg~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~--dGk~~vvEyseip~e~~~~---~~ 339 (528)
T 3r3i_A 266 YIFVSNIDNLGAT-VDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQY--EGKLRLVEIAQVPKAHVDE---FK 339 (528)
T ss_dssp EEEEEETTBTTCC-CCHHHHHHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECS--SSSCEEECTTSSCGGGTTT---SS
T ss_pred EEEEEccCCcccc-cCHHHHHHHHhcccccCCcEEEEEeEccccCCcccEEEEE--CCeEEEEEecCCChhHhhc---cC
Confidence 9999999999865 699999999998 999999999999999999999997 7999999999999998765 35
Q ss_pred CcccccccceeeEEEehHHHHHHhhccccCccceeeecccCccCCCcccchhhhhHhhcCcCCCceeEEEEecCcccccc
Q 010950 344 GRLRFCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPV 423 (497)
Q Consensus 344 g~~~f~~gNi~~~~f~l~fL~~~~~~~~~~lp~h~a~Kki~~~~~~~~~~klE~fifD~~~~~~~~~~~~V~R~~eFsPv 423 (497)
|.++|+++|||||||+++||+++++.....+|+|++.|+++ ..++++|+|+||||+|++++++.+++|+|+ ||+||
T Consensus 340 g~~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd---~~~~viqlEt~igd~i~~f~~~~~i~VpR~-rF~Pv 415 (528)
T 3r3i_A 340 SVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLD---GGLNVIQLETAVGAAIKSFENSLGINVPRS-RFLPV 415 (528)
T ss_dssp CSSSCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCS---SSSCEEEEEBCSTTCSTTSSSCCCEECCGG-GCCBC
T ss_pred CcccCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccC---CCCCEEEeHHHHHHHHHhccCcEEEEEehH-Hcccc
Confidence 78899999999999999999999987667899999999885 578999999999999999999999999998 59999
Q ss_pred ccCCCCCCCCHHHHHHHHHHH
Q 010950 424 KNANGSNFDTPDSARLLVLRL 444 (497)
Q Consensus 424 Kn~~g~~~dsp~ta~~~l~~~ 444 (497)
||+++ ....+.|+|.+
T Consensus 416 Kn~sd-----Lll~~Sdly~l 431 (528)
T 3r3i_A 416 KTTSD-----LLLVMSNLYSL 431 (528)
T ss_dssp CSHHH-----HHHHHSTTSEE
T ss_pred cchHH-----HHHHhcceeEe
Confidence 99765 56667666665
No 6
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=100.00 E-value=5.8e-82 Score=667.22 Aligned_cols=347 Identities=20% Similarity=0.223 Sum_probs=307.4
Q ss_pred HHHHHHHHHHHhcC--CCCCCCcccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCCCCccc
Q 010950 65 PRVDRIIRCSLRSQ--GLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSDPKGCV 142 (497)
Q Consensus 65 ~~~~~~~~~~l~~~--~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~PKg~~ 142 (497)
..|.++|+++++.. ..+|+.|+|+. .+.++++.+.. ..|+++|+ |+|||+||||||||||+++|||++
T Consensus 30 ~~f~~~~~~~~~~~~~~i~~~~i~p~~--~~~~~~~l~~~------~~G~~~L~--kvavvlLaGGlGTRLG~~~pKg~~ 99 (484)
T 3gue_A 30 HIFLIQHALVRKGETGYIPEKSISPVE--SLPFLQGIETK------GENTALLR--QAVVLKLNGGLGTGMGLNGPKSLL 99 (484)
T ss_dssp HHHHHHHHHHHTTCCCCCCGGGCEECC--CCCBHHHHCCS------SCCHHHHT--TEEEEEEECCCCGGGTCSSCGGGS
T ss_pred HHHHHHHHHHhcCCCCccCHhhCCChh--ccCChhhcCCc------hHHHHHHh--hcEEEEEcCCcccccCCCCCceee
Confidence 34667777777653 37899999876 45555554321 16999998 999999999999999999999999
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEEcCCcc
Q 010950 143 NIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQQGTIP 222 (497)
Q Consensus 143 ~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P 222 (497)
||+ +|+||||++++||++++++ +++.||||||||+.||++|++||++|+|||+++++|++|.|+++|
T Consensus 100 ~v~--sgksflql~~eqI~~l~~~-----------~~~~iPl~IMTS~~T~~~T~~~~~k~~~Fgl~~~~v~~F~Q~~~P 166 (484)
T 3gue_A 100 QVK--NGQTFLDFTALQLEHFRQV-----------RNCNVPFMLMNSFSTSGETKNFLRKYPTLYEVFDSDIELMQNRVP 166 (484)
T ss_dssp EEE--TTEEHHHHHHHHHHHHHHH-----------HTCCCCEEEEECTTTHHHHHHHGGGCHHHHTTCCCCCEEECCCEE
T ss_pred ecC--CCCcHHHHHHHHHHHHHHH-----------cCCCceEEEECCcchhHHHHHHHHhCcccCCCccceEEEEeCcee
Confidence 997 9999999999999999876 467899999999999999999999999999999999999999999
Q ss_pred eeecCCce--eecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCcccccccCHHHHHHHhhcCCcEEEE
Q 010950 223 CVSKDGRF--IMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKGVSAGAK 300 (497)
Q Consensus 223 ~~~~~g~~--~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~k 300 (497)
|++.+|+. +++++++++|+|+||||+|.+|+++|+|++|.++|+||+||+|||| |++++||.|||||+.++++|++|
T Consensus 167 ~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDN-L~a~~Dp~~lG~~~~~~~d~~~k 245 (484)
T 3gue_A 167 KIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDN-LGATLDVRLLDYMHEKQLGFLME 245 (484)
T ss_dssp CEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTC-TTCCCCHHHHHHHHHTTCSEEEE
T ss_pred eEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCC-cccccCHHHHHHHHhcCCCEEEE
Confidence 99999984 4567789999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred EeecCCCCCccceEEEe--------cCCCCeEEEEeccCChhhhhhccccCCcccccccceeeEEEehHHHHHHhhcc--
Q 010950 301 VVRKAYPQEKVGVFVRR--------GKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGL-- 370 (497)
Q Consensus 301 vv~k~~p~e~vGvi~~~--------~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~~~~~-- 370 (497)
|++|+.|+|+||+||++ +.+|+++|+||+|+|++.++++...+|.+.| |+||+|+++++|+++++..
T Consensus 246 vv~Kt~~dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~f~~~~g~~~F---NtnNi~~~l~~l~~~l~~~~g 322 (484)
T 3gue_A 246 VCRRTESDKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSFQNIAKHCFF---NTNNIWINLMELKKMMDEQLG 322 (484)
T ss_dssp EEECCTTCCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHHHTCTTTSCEE---EEEEEEEEHHHHHHHHHHTTT
T ss_pred EEECCCCCCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhhhcCCCCceEe---EeeeEEEEHHHHHHHHHhccC
Confidence 99999999999999997 3479999999999999988765445677666 8999999999999998765
Q ss_pred ccCccceeeecccCccC-CCcccchhhhhHhhcCcCCCceeEEEEecCccccccccCCCCCCCCHHHHHHHHHHH
Q 010950 371 EKDSVYHLAEKKIPSIH-GQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRL 444 (497)
Q Consensus 371 ~~~lp~h~a~Kki~~~~-~~~~~~klE~fifD~~~~~~~~~~~~V~R~~eFsPvKn~~g~~~dsp~ta~~~l~~~ 444 (497)
..+||+|+++|++...+ ..+|++|||+||||+|++++++.+++|+| +||+||||+++ +..+|.|+|.+
T Consensus 323 ~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R-~rF~PvKn~sd-----Ll~~~Sdly~l 391 (484)
T 3gue_A 323 VLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFDRSEAVVVPR-ERFAPVKTCSD-----LLALRSDAYQV 391 (484)
T ss_dssp CCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTSSSEEEEECCG-GGCCCCSSHHH-----HHHHHSTTEEE
T ss_pred cCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhCCccEEEEECh-hhccccccchH-----HHHHhhhceec
Confidence 45789999999995443 56899999999999999999999999999 69999999765 67777777765
No 7
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=100.00 E-value=1.6e-76 Score=633.45 Aligned_cols=381 Identities=20% Similarity=0.234 Sum_probs=335.8
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHhcCC--CCCCCcccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCC
Q 010950 52 RDHLVKDIESLDLPRVDRIIRCSLRSQG--LPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQ 129 (497)
Q Consensus 52 k~~l~~ql~~iD~~~~~~~~~~~l~~~~--~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~ 129 (497)
++--.+++...|++.+..+|+++++... .+|+.|+|+ +.+.++++... ..|+++|+ ++|+|+||||+
T Consensus 17 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~i~~~~i~p~--~~~~~~~~~~~-------~~g~~~l~--k~avViLAGGl 85 (505)
T 2oeg_A 17 KKMRDAKVNEACIRTFIAQHVMVSKGETGSIPDSAIMPV--DSLDALDSLTI-------ECDNAVLQ--STVVLKLNGGL 85 (505)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHTTCCCCCCGGGCBCC--CCCCBGGGCCC-------CCCHHHHH--TEEEEEEECCC
T ss_pred HHHHHcCCChHHHHHHHHHHHHHHhcCCCCcChhhcCCh--hhccChhhcch-------hHHHHHHh--cceEEEEcCCc
Confidence 3444567777888999999999885432 466789998 55666666542 37999998 99999999999
Q ss_pred ccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHHHHh-hcCCCCC
Q 010950 130 GTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFE-GHKYFGL 208 (497)
Q Consensus 130 GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~~~-~~~~FGl 208 (497)
|||||+++||+|+||+ +||||||+++++|++++.+ +++.|||+||||++||+.|++||+ ++++||+
T Consensus 86 GTRLg~~~PK~llpV~--~gk~fLe~~ie~l~~~~~~-----------~g~~ip~viMtS~~t~e~t~~~f~~~~~~fGl 152 (505)
T 2oeg_A 86 GTGMGLCDAKTLLEVK--DGKTFLDFTALQVQYLRQH-----------CSEHLRFMLMDSFNTSASTKSFLKARYPWLYQ 152 (505)
T ss_dssp CGGGTCCSCGGGSEEE--TTEEHHHHHHHHHHHHHHH-----------TCTTCEEEEEECHHHHHHHHHHHHHHCHHHHT
T ss_pred ccccCCCCCCcccccC--CCCcHHHHHHHHHHHHHHh-----------cCCCcCEEEEeCCCCHHHHHHHHhhhhhccCC
Confidence 9999999999999997 8999999999999998876 467899999999999999999999 9999999
Q ss_pred CCCcEEEEEcCCcceeecCC-cee-ecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCcccccccCHHH
Q 010950 209 ESDQVTFFQQGTIPCVSKDG-RFI-METPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTF 286 (497)
Q Consensus 209 ~~~~v~~f~Q~~~P~~~~~g-~~~-l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L~~~~Dp~~ 286 (497)
++++|++|.|+++||++.+| +++ ++++..++|+|+||||+|.+|+++|++++|.++|++|++|+|+||+ ++.+||.|
T Consensus 153 ~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL-~~~~D~~l 231 (505)
T 2oeg_A 153 VFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNL-GATIDKRV 231 (505)
T ss_dssp TCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCT-TCCCCHHH
T ss_pred CccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCcc-ccccCHHH
Confidence 99999999999999999988 555 6666679999999999999999999999999999999999999995 89999999
Q ss_pred HHHHhhcCCcEEEEEeecCCCCCccceEEEec-----CCCC-------eEEEEeccCChhhhhhccccCCccccccccee
Q 010950 287 LGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRG-----KGGP-------LTVVEYSELDPSLASAINQETGRLRFCWSNVC 354 (497)
Q Consensus 287 lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~-----~~g~-------~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~ 354 (497)
+|||..++++++++|++|+.|++++|+++.++ .+|+ ++|+||+|+|++.++++ +|.++|.++|||
T Consensus 232 lg~~~~~~ad~~~~v~~k~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~---~g~~~f~~~Nin 308 (505)
T 2oeg_A 232 LAYMEKEKIDFLMEVCRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESF---QDINKYSFFNTN 308 (505)
T ss_dssp HHHHHHHTCSEEEEEEECCTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHH---HCTTTTCEEEEE
T ss_pred HHHHHhcCCcEEEEEEEecCCccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcc---cCccccCeeEEE
Confidence 99999999999999999999999999999843 4799 99999999999987654 477889889999
Q ss_pred eEEEehHHHHHHhhc--cccCccceeeecccCccC-CCcccchhhhhHhhcCcCCCceeEEEEecCccccccccCCCCCC
Q 010950 355 LHMFTLDFLNQVANG--LEKDSVYHLAEKKIPSIH-GQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNF 431 (497)
Q Consensus 355 ~~~f~l~fL~~~~~~--~~~~lp~h~a~Kki~~~~-~~~~~~klE~fifD~~~~~~~~~~~~V~R~~eFsPvKn~~g~~~ 431 (497)
||||+++||+++++. ....||+|++.|++++.+ ..++++|||+||||+|++++++.+++|+|+ ||+||||+
T Consensus 309 n~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~-~FsPvKn~----- 382 (505)
T 2oeg_A 309 NLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASAIVVPRS-RFAPVKTC----- 382 (505)
T ss_dssp EEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSCTTCEEEECCGG-GCCCCSSH-----
T ss_pred EEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhcCcceEEEeccc-eeecccCC-----
Confidence 999999999999876 234689999999998876 468999999999999999999999999998 99999995
Q ss_pred CCHHHHHHHHHHHHH--HHHHHcCceeccCCCCccCeEEeccc
Q 010950 432 DTPDSARLLVLRLHT--RWVIAAGGFLTHSVPLYATGVEVSPL 472 (497)
Q Consensus 432 dsp~ta~~~l~~~~~--~~l~~~G~~~~~~~~~~~~~ieispl 472 (497)
|+|.++|.|+|.+++ +|++ +|+.+. .. ..||++|.
T Consensus 383 ~dl~~~~sdly~~~~~~~~~~-~~~~~~-~~----p~i~l~p~ 419 (505)
T 2oeg_A 383 ADLLALRSDAYVVTDDFRLVL-DDRCHG-HP----PVVDLDSA 419 (505)
T ss_dssp HHHHHHHSTTEEECTTCCEEE-CGGGTT-CC----CEEEECHH
T ss_pred CCHHHHHHHHHhhcCCceEEE-cccccC-cC----CeEEEChh
Confidence 679999999999998 7877 565432 12 24999997
No 8
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-73 Score=610.34 Aligned_cols=400 Identities=20% Similarity=0.226 Sum_probs=333.7
Q ss_pred hccccccCC--HHHHHHHHHHHhcCChHHHHHHHHHHHhc----CCCCCCCcccCCCCCccccccCChHHHHHHHHHhhh
Q 010950 40 AFALWDELS--PDERDHLVKDIESLDLPRVDRIIRCSLRS----QGLPVAAIEPVPERSVSTVEERTMDERERWWKMGLK 113 (497)
Q Consensus 40 ll~~~~~l~--~~ek~~l~~ql~~iD~~~~~~~~~~~l~~----~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~ 113 (497)
|-++|+.+. ++||++|.+||+ .+..+|++++.. ...+|+.++|+|++.+.++.+.. .|. .|+.
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~-----~~~-~~~~ 88 (488)
T 2i5k_A 20 LNKLADSSKLDDAARAKFENELD-----SFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIIS-----QQP-ENVS 88 (488)
T ss_dssp TTCCC--------CCSCTHHHHH-----HHHHHHHHHHHHHHSCCSCCGGGEECCCTTTEEEHHHHH-----SSC-CCST
T ss_pred HHHHHhhcCCCHHHHHHHHHHHH-----HHHHHHHHHHhcccccCCCcccccccCChhcccChhhcc-----cch-hhhh
Confidence 668888877 788888999997 678888887743 23578899999988877775432 111 2555
Q ss_pred hhcCCCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCch
Q 010950 114 AISDGKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTD 193 (497)
Q Consensus 114 ~i~~gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~ 193 (497)
+ .+|+|||+||||+|||||++.||+|+|| ++||||||++++++++++.. +++.|||+||||++|+
T Consensus 89 ~--~~k~avViLAGG~GTRmgs~~PK~l~~V--~~gk~~Le~~i~~i~~l~~~-----------~G~~Ip~vImts~~t~ 153 (488)
T 2i5k_A 89 N--LSKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLSVRQIEYLNRQ-----------YDSDVPLLLMNSFNTD 153 (488)
T ss_dssp T--GGGEEEEEECCCBSGGGTCCSBSTTSCC--BTTBCHHHHHHHHHHHHHHH-----------HTCCCEEEEECCTTTH
T ss_pred h--cCCceEEEEcCCCcccCCCCCCcccccc--CCCCcHHHHHHHHHHHhHHh-----------cCCCccEEEEECCCCH
Confidence 5 4699999999999999999999999987 56999999999999887654 3578999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCC---ccccccCCCchhhHhhhhccHHHHHHHcCceEEE
Q 010950 194 DATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPY---KVAKAPDGNGGVYSALKSSKLLEDMATRGIKYID 270 (497)
Q Consensus 194 ~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~---~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~ 270 (497)
+.|++||+++++||+ +|++|.|+++||++.+|+++++.+. .++++|+||||+|.+|..+|++++|.++|++|++
T Consensus 154 e~t~~~~~~~~~fg~---~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~ 230 (488)
T 2i5k_A 154 KDTEHLIKKYSANRI---RIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILF 230 (488)
T ss_dssp HHHHHHHGGGCSSSC---EEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhccccCc---eEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEE
Confidence 999999999999997 6999999999999999999998764 6899999999999999999999999999999999
Q ss_pred EEeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccc
Q 010950 271 CYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCW 350 (497)
Q Consensus 271 v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~ 350 (497)
|+|+|| |++..||.+||||..++++++++|+++++|++++|+||+. +|+.++|||+|++++.+..++ +.+.|+.
T Consensus 231 V~ngDn-L~~~~d~~~L~~~~~~~a~~t~~v~~~~~p~~~yG~Iv~~--dG~~~iVE~~e~~~e~~~~~~---~~~~~~~ 304 (488)
T 2i5k_A 231 VSNGDN-LGATVDLKILNHMIETGAEYIMELTDKTRADVKGGTLISY--DGQVRLLEVAQVPKEHIDEFK---NIRKFTN 304 (488)
T ss_dssp EECTTB-SSCCCCHHHHHHHHHSCCSEEEEEEECCGGGSSSCEEEEE--TTEEEEECGGGSCTTSHHHHT---CTTTCCE
T ss_pred EEeCCc-CCCcccHHHHHHHHhcCCcEEEEEEEecCCCCceeEEEEE--CCcEEEEEeccCCHHHHhhcc---cccccCE
Confidence 999999 7999999999999999999999999999999999999986 688999999999998776543 3456777
Q ss_pred cceeeEEEehHHHHHHhhccccCccceeeecccCccCCCcccchhhhhHhhcCcCCCceeEEEEecCccccccccCCCCC
Q 010950 351 SNVCLHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSN 430 (497)
Q Consensus 351 gNi~~~~f~l~fL~~~~~~~~~~lp~h~a~Kki~~~~~~~~~~klE~fifD~~~~~~~~~~~~V~R~~eFsPvKn~~g~~ 430 (497)
.|||||||++++|+++++.....||+|++.|++||-++.++++|||+||||+|++++++.+++|+|+ ||+||||++
T Consensus 305 ~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~-~F~PvKn~~--- 380 (488)
T 2i5k_A 305 FNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRS-RFLPVKTCS--- 380 (488)
T ss_dssp EEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGSSSCEEEEECGG-GCCBCCSHH---
T ss_pred EEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhccCceEEEeccc-ccccccCCc---
Confidence 7999999999999999987667899999999999844567899999999999999999999999998 899999954
Q ss_pred CCCHHHHHHHHHHHHHHHHHHcCceeccCCCCccCeEEecccCcccccchhhhhCCce----ecC-Cccc
Q 010950 431 FDTPDSARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRT----FHA-PCEI 495 (497)
Q Consensus 431 ~dsp~ta~~~l~~~~~~~l~~~G~~~~~~~~~~~~~ieispl~sy~Ge~l~~~~~~~~----~~~-p~~i 495 (497)
.+++.++.+|...+|..+... ..|||+|++||+|+ +. +++. |+. |.++
T Consensus 381 --------~ll~~~~~~~~~~~g~~~~~~-----~~~e~~P~v~~~~~-~~---~~~~~~~rf~~~p~i~ 433 (488)
T 2i5k_A 381 --------DLLLVKSDLFRLEHGSLKLDP-----SRFGPNPLIKLGSH-FK---KVSGFNARIPHIPKIV 433 (488)
T ss_dssp --------HHHHHTSTTEEEETTEEEECT-----TCCSSCCEEEECGG-GS---SHHHHHHHCSSCCBCT
T ss_pred --------cHHHHHHHHHHHhcCcEeecC-----CcCCCCCeEEECCc-cc---chhhHHhhcCCCcccc
Confidence 345666666776778765321 23899999999995 43 4444 666 6553
No 9
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=100.00 E-value=1.3e-71 Score=592.72 Aligned_cols=376 Identities=19% Similarity=0.221 Sum_probs=322.0
Q ss_pred hcCChHHHHHHHHHHHhcC--CCCCCCcccCCCCCccccccCChHHHHHHHHHhhhhhcCCCEEEEEecCCCccccCCCC
Q 010950 60 ESLDLPRVDRIIRCSLRSQ--GLPVAAIEPVPERSVSTVEERTMDERERWWKMGLKAISDGKLAVLLLSGGQGTRLGSSD 137 (497)
Q Consensus 60 ~~iD~~~~~~~~~~~l~~~--~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLAGG~GTRLG~~~ 137 (497)
..+|++.+.++|++++... ..+|+.++|+|++.+.++++.... .++++.|++++ ||+++|+||||+|||||+++
T Consensus 22 ~~~~~~~f~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~--~~~~~~g~~~l--~k~~vviLAGGlGTRLg~~~ 97 (469)
T 2icy_A 22 SESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPV--SQDVAETKNLL--DKLVVLKLNGGLGTTMGCTG 97 (469)
T ss_dssp CHHHHHHHHHHHHHHC------CCGGGCBCCCTTTEEEGGGSCCC--CSCHHHHHHHH--TTEEEEEEECCBSGGGTCCS
T ss_pred chhhHHHHHHHHHHHHhccCCCCcccccccCCcccccChhhcccc--hhhHHHHHHhh--ccceEEEEcCCccccCCCCC
Confidence 4567788999999887543 257789999999888888876521 13456799999 69999999999999999999
Q ss_pred CCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHHHHhhcCCCCCCCCcEEEEE
Q 010950 138 PKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYFEGHKYFGLESDQVTFFQ 217 (497)
Q Consensus 138 PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~~~~~~~FGl~~~~v~~f~ 217 (497)
||+|+|+ ++||||||+++++|++++.. +++.|||+||||++||+.|++||++|++||+ +|++|.
T Consensus 98 PK~llpv--~~gkp~Le~~i~~l~~~~~~-----------~G~~ip~vimts~~t~e~t~~~f~~~~~fG~---~I~~f~ 161 (469)
T 2icy_A 98 PKSVIEV--RDGLTFLDLIVIQIENLNNK-----------YGCKVPLVLMNSFNTHDDTHKIVEKYTNSNV---DIHTFN 161 (469)
T ss_dssp BGGGSEE--ETTEEHHHHHHHHHHHHHHH-----------HSCCCCEEEEECTTTHHHHHHHHGGGTTSSS---CEEEEE
T ss_pred Ccccccc--CCCCCHHHHHHHHHHHHHHh-----------cCCCccEEEEeCCCCHHHHHHHHHhcccCCc---eEEEEE
Confidence 9999887 57999999999999987654 3577999999999999999999999999998 699999
Q ss_pred cCCcceeecCCceeecCC---CccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCcccccccCHHHHHHHhhcC
Q 010950 218 QGTIPCVSKDGRFIMETP---YKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALVRVADPTFLGYFIDKG 294 (497)
Q Consensus 218 Q~~~P~~~~~g~~~l~~~---~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L~~~~Dp~~lG~~~~~~ 294 (497)
|+++||++.+|+++++++ +.++|+|+||||+|.+|+++|++++|.++|++|++|+|+||+ ++.+||.|+|||.+++
T Consensus 162 Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL-~~~~d~~ll~~~~~~~ 240 (469)
T 2icy_A 162 QSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNL-GAIVDLTILKHLIQNK 240 (469)
T ss_dssp CCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBT-TCCCCHHHHHHHHHHT
T ss_pred ecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcC-CcccCHHHHHHHHHcC
Confidence 999999999999999876 689999999999999999999999999999999999999995 8999999999999999
Q ss_pred CcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccceeeEEEehHHHHHHhhccccCc
Q 010950 295 VSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQVANGLEKDS 374 (497)
Q Consensus 295 ~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~~~~~~~~l 374 (497)
++++++|++|+.|++++|++|.. +|+.+++||+|+|++.++++.+ ...|+++|||||||++++|+++.+.....+
T Consensus 241 a~~t~~v~~k~~~~~~~Gvl~~~--dg~~~vvE~~e~p~~~~~e~k~---~~~~~~~N~g~y~~~~~~L~~i~~~~~~~l 315 (469)
T 2icy_A 241 NEYCMEVTPKTLADVKGGTLISY--EGKVQLLEIAQVPDEHVNEFKS---IEKFKIFNTNNLWVNLKAIKKLVEADALKM 315 (469)
T ss_dssp CSEEEEEEECCTTCCSSCEEEEE--TTEEEEECGGGSCGGGHHHHHS---SSSCCEEEEEEEEEEHHHHHHHHHTTCCCC
T ss_pred CCeeEEEEEeccCCCceeEEEEE--CCEEEEEEEeccChhhhhhhcc---ccccceeeEEEEEEcHHHHHHHHhcccCCc
Confidence 99999999999999999999986 6899999999999986543211 245666799999999999999987655689
Q ss_pred cceeeecccCccCCCcccchhhhhHhhcCcCCCceeEEEEecCccccccccCCCCCCCCHHHHHHHHHHHHHH-HHHHcC
Q 010950 375 VYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAPSTALFEVLREEEFAPVKNANGSNFDTPDSARLLVLRLHTR-WVIAAG 453 (497)
Q Consensus 375 p~h~a~Kki~~~~~~~~~~klE~fifD~~~~~~~~~~~~V~R~~eFsPvKn~~g~~~dsp~ta~~~l~~~~~~-~l~~~G 453 (497)
|+|++.|++ | ..+++|||+||||++++++++.+++|+|+ ||+||||++ +++..+++ |...+|
T Consensus 316 p~~v~~K~i---d-~~~~~klE~~~~D~~~~~~~~~~~~V~R~-~F~PvKn~~------------dll~~~s~l~~~~~g 378 (469)
T 2icy_A 316 EIIPNPKEV---D-GVKVLQLETAAGAAIRFFDNAIGVNVPRS-RFLPVKASS------------DLLLVQSDLYTLVDG 378 (469)
T ss_dssp CCBCCEEEE---T-TEEEECCBCCGGGGGGGSTTCEEEECCGG-GCCBCCSHH------------HHHHHHSTTEEEETT
T ss_pred hhhccceec---C-CCceEeehHhhHHHHHhcCCeEEEEechh-HcCcCCCHH------------HHHHHHHHHHHHhcC
Confidence 999999988 3 57899999999999999999999999997 899999954 45555555 555566
Q ss_pred ceeccCCCCccCeEEecccCcccccchhhh
Q 010950 454 GFLTHSVPLYATGVEVSPLCSYAGENLEAI 483 (497)
Q Consensus 454 ~~~~~~~~~~~~~ieispl~sy~Ge~l~~~ 483 (497)
..+.+. ...+|++|++||+++ ++.+
T Consensus 379 ~~~~~~----~~~~~~~P~v~l~~~-~~~v 403 (469)
T 2icy_A 379 FVTRNK----ARTNPSNPSIELGPE-FKKV 403 (469)
T ss_dssp EEEECT----TCCSSSCCEEEECGG-GCSH
T ss_pred cEEecC----cccCCCCCeEEcChh-hhhH
Confidence 644321 124899999999988 7654
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.55 E-value=1.2e-13 Score=148.19 Aligned_cols=256 Identities=17% Similarity=0.146 Sum_probs=172.7
Q ss_pred CCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHH
Q 010950 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (497)
Q Consensus 118 gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (497)
+.+|||+||||+||||....||.|+|| .||+++++.++.+.++. --.| +|.| .+..+.++
T Consensus 11 ~~~~vvILAaG~GtRm~~~~pK~l~pv---~gkp~i~~~l~~~~~~g--------------~~~i--~vv~-~~~~~~i~ 70 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDTPKVLHTL---AGRSMLSHVLHAIAKLA--------------PQRL--IVVL-GHDHQRIA 70 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSSCGGGCEE---TTEEHHHHHHHHHHHHC--------------CSEE--EEEE-CTTHHHHH
T ss_pred CCceEEEECCcCcccCCCCCCHHHeEE---CChhHHHHHHHHHHhCC--------------CCEE--EEEe-CCCHHHHH
Confidence 589999999999999999999999999 99999999999875421 1123 4545 57788999
Q ss_pred HHHhh-cCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCc
Q 010950 198 KYFEG-HKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDN 276 (497)
Q Consensus 198 ~~~~~-~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN 276 (497)
++|.+ .+.+|. +|.+..|.. |.|.|+....-.. .+...-...+++.+.|.
T Consensus 71 ~~~~~~~~~~~~---~i~~~~q~~---------------------~lGTa~Av~~a~~-----~l~~~~~~~~lvl~gd~ 121 (501)
T 3st8_A 71 PLVGELADTLGR---TIDVALQDR---------------------PLGTGHAVLCGLS-----ALPDDYAGNVVVTSGDT 121 (501)
T ss_dssp HHHHHHHHHHTS---CCEEEECSS---------------------CCCHHHHHHHHHT-----TSCTTCCSEEEEEETTC
T ss_pred HHHHHHHHhcCC---cEEEEEcCC---------------------CCCcHHHHHHHHH-----HhccccccceeeecCcc
Confidence 99986 334664 577888764 6799987654322 12223356888999999
Q ss_pred ccccccCH-HHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCC-eEEEEeccCChhhhhhccccCCccccccccee
Q 010950 277 ALVRVADP-TFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGP-LTVVEYSELDPSLASAINQETGRLRFCWSNVC 354 (497)
Q Consensus 277 ~L~~~~Dp-~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~-~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~ 354 (497)
+|....+. .++-++...++++++-+.+..+|... |++.+.. +|+ ..++|..+.+++... -+..|++
T Consensus 122 ~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~y-G~i~~~~-~g~v~~ivEk~~~~~~~~~----------i~~in~G 189 (501)
T 3st8_A 122 PLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGY-GRILRTQ-DHEVMAIVEQTDATPSQRE----------IREVNAG 189 (501)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTS-CEEEECT-TCCEEEEECGGGCCHHHHH----------CCEEEEE
T ss_pred eeecHHHHHHHHHHHhhccccceEeeeccCCchhc-ccccccc-ceeEEeeccccCCChhhcc----------ceeeece
Confidence 87443322 36778888999998888888888887 6666653 554 456888777765432 1356999
Q ss_pred eEEEehHHHHHHhhccccCccceeeecccCccCCCcccchhhhhHhhcCcCCC----ceeEEEEecCccccccccCCCCC
Q 010950 355 LHMFTLDFLNQVANGLEKDSVYHLAEKKIPSIHGQTVGFKLEQFIFDAFPYAP----STALFEVLREEEFAPVKNANGSN 430 (497)
Q Consensus 355 ~~~f~l~fL~~~~~~~~~~lp~h~a~Kki~~~~~~~~~~klE~fifD~~~~~~----~~~~~~V~R~~eFsPvKn~~g~~ 430 (497)
+++|+.+.|++++.... .+..+-|.++.|++.+.. ....+.+...++...+.+
T Consensus 190 iy~f~~~~l~~~l~~l~------------------~~n~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~----- 246 (501)
T 3st8_A 190 VYAFDIAALRSALSRLS------------------SNNAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNN----- 246 (501)
T ss_dssp EEEEEHHHHHHHHTTCC------------------CCSTTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSS-----
T ss_pred eeeecchhHHHhhhhhc------------------ccccccccchhhHHHHHHhcCceEEEEeccchhhhccccc-----
Confidence 99999999998875321 123556777777776632 333444444434444433
Q ss_pred CCCHHHHHHHHHHHHHHHHHHcCceec
Q 010950 431 FDTPDSARLLVLRLHTRWVIAAGGFLT 457 (497)
Q Consensus 431 ~dsp~ta~~~l~~~~~~~l~~~G~~~~ 457 (497)
......+...+..+..+.++..|+.+.
T Consensus 247 ~~~l~~~~~~~~~r~~~~~~~~gv~~~ 273 (501)
T 3st8_A 247 RVQLAELASELNRRVVAAHQLAGVTVV 273 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEES
T ss_pred HHHHHHHHHHhhhhhhhhhcccCceee
Confidence 122444555555666666677888654
No 11
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.05 E-value=1.4e-09 Score=106.32 Aligned_cols=189 Identities=16% Similarity=0.151 Sum_probs=120.2
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+ ||.+.|| .||+++++.++++.+ .++. .++|-|. ++.+.+
T Consensus 2 ~~~aiIlA~G~stRlp---~K~L~~i---~GkPli~~~l~~l~~---------------~~~~-~ivVv~~---~~~i~~ 56 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP---GKPLADI---GGKPMIQWVYEQAMQ---------------AGAD-RVIIATD---DERVEQ 56 (252)
T ss_dssp CEEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHH---------------TTCS-EEEEEES---CHHHHH
T ss_pred ceEEEEecCcCCCCCC---CcceeeE---CCEEHHHHHHHHHHh---------------CCCC-eEEEECC---HHHHHH
Confidence 5789999999999995 7999999 899999999998754 1221 3356552 688999
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++ ||. ++.+..|+ .|.|.|+++.++.. +...+.+++++++.|++|
T Consensus 57 ~~~~---~g~---~v~~~~~~---------------------~~~Gt~~~~~~~~~------l~~~~~d~vlv~~gD~Pl 103 (252)
T 3oam_A 57 AVQA---FGG---VVCMTSPN---------------------HQSGTERLAEVVAK------MAIPADHIVVNVQGDEPL 103 (252)
T ss_dssp HHHH---TTC---EEEECCTT---------------------CCSHHHHHHHHHHH------TTCCTTSEEEECCTTCTT
T ss_pred HHHH---cCC---EEEEcCCC---------------------CCCcHHHHHHHHHh------cCcCCCCEEEEEeCCeee
Confidence 9986 554 23222222 36688887666532 211256899999999997
Q ss_pred ccccCH-HHHHHHhhcCCcEEEEEeecCCCCCc----cceEEEecCCCCeEEEEeccCCh-hhhhhccccCC-ccccccc
Q 010950 279 VRVADP-TFLGYFIDKGVSAGAKVVRKAYPQEK----VGVFVRRGKGGPLTVVEYSELDP-SLASAINQETG-RLRFCWS 351 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~~~~~~~kvv~k~~p~e~----vGvi~~~~~~g~~~vvEYsel~~-~~~~~~~~~~g-~~~f~~g 351 (497)
....+. .++..+...++++++-+++-.+|.+. +|.++.. .+| .++.+++-+- +..+....... ...-+..
T Consensus 104 i~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d-~~g--~v~~fsr~~i~~~~~~~~~~~~~~~~~~~~ 180 (252)
T 3oam_A 104 IPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITD-KSG--YALYFSRATIPWDRDNFAKADKAIVQPLLR 180 (252)
T ss_dssp CCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEEC-TTS--BEEEEESSCSSCCHHHHHSSSCCCCSCEEE
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEEC-CCC--eEEEEeCCCCCCCCCccccccccccccceE
Confidence 544333 35666666778887666665544433 3555554 356 4677776331 11111100000 0011357
Q ss_pred ceeeEEEehHHHHHHhh
Q 010950 352 NVCLHMFTLDFLNQVAN 368 (497)
Q Consensus 352 Ni~~~~f~l~fL~~~~~ 368 (497)
|++++.|+.++|++...
T Consensus 181 n~GiY~~~~~~l~~~~~ 197 (252)
T 3oam_A 181 HIGIYAYRAGFINTYLD 197 (252)
T ss_dssp EEEEEEEETTHHHHHHH
T ss_pred EEEEEEcCHHHHHHHHc
Confidence 99999999999998764
No 12
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=98.99 E-value=1.3e-08 Score=100.14 Aligned_cols=181 Identities=13% Similarity=0.180 Sum_probs=121.0
Q ss_pred CCEEEEEecCCCccccCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchH
Q 010950 118 GKLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (497)
Q Consensus 118 gkvavvlLAGG~GTRLG~---~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (497)
.++.+|+||||.||||+. ..||.++|+ .|++++++.++++.+ .++. .++|.|.....+
T Consensus 23 ~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i---~g~pli~~~l~~l~~---------------~g~~-~iivv~~~~~~~ 83 (269)
T 4ecm_A 23 NAMKGIILAGGTGSRLYPITKVTNKHLLPV---GRYPMIYHAVYKLKQ---------------CDIT-DIMIITGKEHMG 83 (269)
T ss_dssp -CEEEEEECCSCCGGGTTTTSSSCGGGSEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEECTTTHH
T ss_pred cCcEEEEECCCCccccccccCCCCceecEE---CCEEHHHHHHHHHHH---------------CCCC-EEEEECChhhHH
Confidence 467899999999999986 889999999 799999999998753 1211 336666654557
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeC
Q 010950 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 274 (497)
Q Consensus 195 ~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~v 274 (497)
.+.+++.....+|++ +.+..|. .+.|.|+...... +.+ +-++++|.+.
T Consensus 84 ~~~~~~~~~~~~~~~---i~~~~~~---------------------~~~G~~~al~~a~-----~~~---~~~~~lv~~~ 131 (269)
T 4ecm_A 84 DVVSFLGSGQEFGVS---FTYRVQD---------------------KAGGIAQALGLCE-----DFV---GNDRMVVILG 131 (269)
T ss_dssp HHHHHHTTSGGGTCE---EEEEECS---------------------SCCCHHHHHHTTH-----HHH---TTSEEEEEET
T ss_pred HHHHHHhhccccCce---EEEeeCC---------------------ccCcHHHHHHHHH-----Hhc---CCCcEEEEeC
Confidence 888998865556653 4433332 1446665554322 222 2578999999
Q ss_pred CcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCccccccccee
Q 010950 275 DNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVC 354 (497)
Q Consensus 275 DN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~ 354 (497)
|+++. ..--.++..+...++++++-+.+..+|. .-|++... +| .|+++.|-|.. + .....|++
T Consensus 132 D~~~~-~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~v~~d--~g--~v~~~~ekp~~------~-----~~~~~~~G 194 (269)
T 4ecm_A 132 DNIFS-DDIRPYVEEFTNQKEGAKVLLQSVDDPE-RFGVANIQ--NR--KIIEIEEKPKE------P-----KSSYAVTG 194 (269)
T ss_dssp TEEES-SCSHHHHHHHHTSSSSEEEEEEECSCGG-GSEEEEEE--TT--EEEEEEESCSS------C-----SCSEEEEE
T ss_pred CccCc-cCHHHHHHHHHhcCCCeEEEEEECCCCC-CceEEEEc--CC--EEEEEEECCCC------C-----CCcEEEEE
Confidence 99864 3334577888888888877776655554 34777664 45 46666554411 0 11256999
Q ss_pred eEEEehHHHHHH
Q 010950 355 LHMFTLDFLNQV 366 (497)
Q Consensus 355 ~~~f~l~fL~~~ 366 (497)
+++|+.++++.+
T Consensus 195 iy~~~~~~l~~l 206 (269)
T 4ecm_A 195 IYLYDSKVFSYI 206 (269)
T ss_dssp EEEECTTHHHHH
T ss_pred EEEECHHHHHhh
Confidence 999999988543
No 13
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=98.83 E-value=6.6e-08 Score=96.68 Aligned_cols=183 Identities=17% Similarity=0.227 Sum_probs=116.4
Q ss_pred CEEEEEecCCCccccC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHH
Q 010950 119 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 195 (497)
Q Consensus 119 kvavvlLAGG~GTRLG---~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~ 195 (497)
++.+|+||||.||||+ ...||.++|+ .||+++++.++.+.. .++. .++|.|+....+.
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~I~vv~~~~~~~~ 62 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPV---YDKPMIYYPLSTLML---------------AGIR-EILIISTPQDTPR 62 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHH
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeE---CCEeHHHHHHHHHHH---------------CCCC-EEEEEeccccHHH
Confidence 3568999999999998 4679999999 899999999998753 1211 2356677777888
Q ss_pred HHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCC
Q 010950 196 TRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVD 275 (497)
Q Consensus 196 t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vD 275 (497)
+.+++.+...+|+ ++.+..|+ .|.|.++.+....+ .+ +-+.+.++..|
T Consensus 63 i~~~l~~g~~~g~---~i~~~~~~---------------------~~~G~~~al~~a~~-----~i---~~~~~~lv~gD 110 (293)
T 1fxo_A 63 FQQLLGDGSNWGL---DLQYAVQP---------------------SPDGLAQAFLIGES-----FI---GNDLSALVLGD 110 (293)
T ss_dssp HHHHHTTSGGGTC---EEEEEECS---------------------SCCCGGGHHHHTHH-----HH---TTSEEEEEETT
T ss_pred HHHHHhcccccCc---eEEEeeCC---------------------CCCCHHHHHHHHHH-----Hh---CCCCEEEEECC
Confidence 9999987555664 24443332 26677776654321 22 22556666699
Q ss_pred cccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccceee
Q 010950 276 NALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCL 355 (497)
Q Consensus 276 N~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~ 355 (497)
|++....-..++..+...+.++.+-+.+-.+|. +.|++... .+|+ ++.+.|-|.. + +. +..|++.
T Consensus 111 ~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~-~~g~v~~d-~~g~--v~~~~ekp~~------~---~s--~~~~~Gi 175 (293)
T 1fxo_A 111 NLYYGHDFHELLGSASQRQTGASVFAYHVLDPE-RYGVVEFD-QGGK--AISLEEKPLE------P---KS--NYAVTGL 175 (293)
T ss_dssp EEEECTTHHHHHHHHHTCCSSEEEEEEECSCGG-GSEEEEEC-TTSC--EEEEEESCSS------C---SS--SEEEEEE
T ss_pred hhccCccHHHHHHHHHhcCCCcEEEEEECCCcc-cCcEEEEC-CCCc--EEEEEECCCC------C---CC--CeEEEEE
Confidence 997543223456666555666655555545554 55777654 3453 5455443311 0 11 2468999
Q ss_pred EEEehHHHHHHh
Q 010950 356 HMFTLDFLNQVA 367 (497)
Q Consensus 356 ~~f~l~fL~~~~ 367 (497)
++|+.+.++.+.
T Consensus 176 y~~~~~~l~~~~ 187 (293)
T 1fxo_A 176 YFYDQQVVDIAR 187 (293)
T ss_dssp EEECTTHHHHHH
T ss_pred EEEcHHHHHHHH
Confidence 999999876543
No 14
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=98.80 E-value=1.4e-07 Score=94.43 Aligned_cols=181 Identities=17% Similarity=0.207 Sum_probs=116.3
Q ss_pred EEEEEecCCCccccC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHH
Q 010950 120 LAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (497)
Q Consensus 120 vavvlLAGG~GTRLG---~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (497)
+.+|+||||.||||+ ...||.++|+ .||+++++.++.+.. .++. .++|.|+.+..+.+
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~I~vv~~~~~~~~i 64 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQLLPI---YDKPMIYYPLSVLML---------------AGIR-EILIITTPEDKGYF 64 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHHH
T ss_pred cEEEEECCCCCCcCCcccCCCCceeeEE---CCeeHHHHHHHHHHh---------------CCCC-cEEEEechhHHHHH
Confidence 467899999999998 6789999999 799999999998753 1211 33666766777888
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCc
Q 010950 197 RKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDN 276 (497)
Q Consensus 197 ~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN 276 (497)
.+++.+...+|++ +.+..|. .|.|.++.+.... +.+ . + +.+.++..||
T Consensus 65 ~~~l~~g~~~g~~---i~~~~~~---------------------~~~G~~~al~~a~-----~~i-~-~-~~~~lv~gD~ 112 (296)
T 1mc3_A 65 QRLLGDGSEFGIQ---LEYAEQP---------------------SPDGLAQAFIIGE-----TFL-N-G-EPSCLVLGDN 112 (296)
T ss_dssp HHHHTTSGGGTCE---EEEEECS---------------------SCCCSTHHHHHTH-----HHH-T-T-SCEEEEETTE
T ss_pred HHHHhcccccCce---EEEeccC---------------------CCCCHHHHHHHHH-----HHh-C-C-CCEEEEECCc
Confidence 9999875556652 4444433 2567776554422 122 1 2 3344555999
Q ss_pred ccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccceeeE
Q 010950 277 ALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLH 356 (497)
Q Consensus 277 ~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~~ 356 (497)
++....-..++..+...+.++.+-+.+-.+|. +.|++... .+| .|+.+.|-|.. + .. +..|++++
T Consensus 113 ~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~-~yg~v~~d-~~g--~v~~~~ekp~~------~---~s--~~~~~Giy 177 (296)
T 1mc3_A 113 IFFGQGFSPKLRHVAARTEGATVFGYQVMDPE-RFGVVEFD-DNF--RAISLEEKPKQ------P---KS--NWAVTGLY 177 (296)
T ss_dssp EEECSSCHHHHHHHTTCCSSEEEEEEECSCCS-SSBBCEEE-TTE--EEEECCBSCSS------C---SC--SEEEEEEE
T ss_pred cccccCHHHHHHHHHHcCCCCEEEEEECCCcc-cCCEEEEC-CCC--cEEEEEECCCC------C---CC--CEEEEEEE
Confidence 97554334566666555556655555555664 56777654 244 56666664421 0 11 24689999
Q ss_pred EEehHHHHHH
Q 010950 357 MFTLDFLNQV 366 (497)
Q Consensus 357 ~f~l~fL~~~ 366 (497)
+|+.++++.+
T Consensus 178 ~~~~~~l~~~ 187 (296)
T 1mc3_A 178 FYDSKVVEYA 187 (296)
T ss_dssp ECCTHHHHHH
T ss_pred EEcHHHHHHH
Confidence 9999987654
No 15
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=98.77 E-value=2.4e-07 Score=92.83 Aligned_cols=182 Identities=16% Similarity=0.158 Sum_probs=113.6
Q ss_pred EEEEEecCCCccccC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHH
Q 010950 120 LAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (497)
Q Consensus 120 vavvlLAGG~GTRLG---~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (497)
+.+|+||||.||||+ ...||.++|| .||+++++.++.+.. .++. .++|.|+.+..+.+
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~llpi---~gkpli~~~l~~l~~---------------~gi~-~Iivv~~~~~~~~i 64 (295)
T 1lvw_A 4 MKGIVLAGGSGTRLYPITRAVSKQLLPI---YDKPMIYYPLSVLML---------------AGIR-DILIISTPRDLPLY 64 (295)
T ss_dssp CEEEEECCCCCSTTTTTTTSSCGGGSEE---TTEETTHHHHHHHHH---------------TTCC-EEEEEECTTTHHHH
T ss_pred eEEEEECCCCCCccccccCCCCceecEE---CCeeHHHHHHHHHHH---------------CCCC-eEEEEeccchHHHH
Confidence 467899999999998 5679999999 799999999998753 1211 33666776777888
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCc
Q 010950 197 RKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDN 276 (497)
Q Consensus 197 ~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN 276 (497)
.+++.+...+|+ ++.+..|+ .|.|.++.+.... +.+ . . +.+.++..||
T Consensus 65 ~~~l~~g~~~g~---~i~~~~~~---------------------~~~G~~~al~~a~-----~~i-~-~-~~~~lv~gD~ 112 (295)
T 1lvw_A 65 RDLLGDGSQFGV---RFSYRVQE---------------------EPRGIADAFIVGK-----DFI-G-D-SKVALVLGDN 112 (295)
T ss_dssp HHHHTTSGGGTS---EEEEEECS---------------------SCCCGGGHHHHTH-----HHH-T-T-SCEEEEETTC
T ss_pred HHHhhhccccCc---eEEEeeCC---------------------CCCChHHHHHHHH-----HHh-C-C-CcEEEEECCc
Confidence 999987545664 24443332 2567777655432 122 1 2 3344445999
Q ss_pred ccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccceeeE
Q 010950 277 ALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLH 356 (497)
Q Consensus 277 ~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~~ 356 (497)
++....-..++..+.+.+.++.+-+.+-.+|. +-|++... .+|+ |+.+.|-|.. + +. +..|++.+
T Consensus 113 ~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp~-~~g~v~~d-~~g~--v~~~~ekp~~------~---~s--~~~~~Giy 177 (295)
T 1lvw_A 113 VFYGHRFSEILRRAASLEDGAVIFGYYVRDPR-PFGVVEFD-SEGR--VISIEEKPSR------P---KS--NYVVPGLY 177 (295)
T ss_dssp CEECTTHHHHHHHHHTCCSSEEEEEEECSCCT-TSEEEEEC-TTSB--EEEEEESCSS------C---SC--SEECCSEE
T ss_pred cccCcCHHHHHHHHHHcCCCcEEEEEECCCcc-cCCEEEEC-CCCc--EEEEEECCCC------C---CC--CEEEEEeE
Confidence 97543223456666555556555555555564 45776553 3453 5555444311 0 11 24688999
Q ss_pred EEehHHHHHHh
Q 010950 357 MFTLDFLNQVA 367 (497)
Q Consensus 357 ~f~l~fL~~~~ 367 (497)
+|+.+.++.+.
T Consensus 178 ~f~~~~l~~~~ 188 (295)
T 1lvw_A 178 FYDNQVVEIAR 188 (295)
T ss_dssp EECTTHHHHHH
T ss_pred EEcHHHHHHHH
Confidence 99998876543
No 16
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=98.76 E-value=5.4e-08 Score=96.15 Aligned_cols=186 Identities=17% Similarity=0.170 Sum_probs=116.7
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+ .|.+.|| .||+++++.++++.+ .++. .++|-|. ++.+.+
T Consensus 18 ~~~aIIlA~G~stRlp---~K~L~~i---~GkPmi~~~l~~l~~---------------~~i~-~IvV~t~---~~~i~~ 72 (264)
T 3k8d_A 18 SFVVIIPARYASTRLP---GKPLVDI---NGKPMIVHVLERARE---------------SGAE-RIIVATD---HEDVAR 72 (264)
T ss_dssp CCEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHH---------------TTCS-EEEEEES---CHHHHH
T ss_pred ceEEEEEcCCCCCCCC---CcceeeE---CCeEHHHHHHHHHHh---------------CCCC-EEEEECC---HHHHHH
Confidence 5789999999999994 4999999 899999999998753 1211 3366552 578888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++ ||.. +.+-.|. .|.|.|++..++. .+...+.+++.+++.|++|
T Consensus 73 ~~~~---~g~~---v~~~~~~---------------------~~~Gt~~i~~~~~------~l~~~~~d~vlv~~gD~Pl 119 (264)
T 3k8d_A 73 AVEA---AGGE---VCMTRAD---------------------HQSGTERLAEVVE------KCAFSDDTVIVNVQGDEPM 119 (264)
T ss_dssp HHHH---TTCE---EEECCTT---------------------CCSHHHHHHHHHH------HHTCCTTCEEEEECTTCTT
T ss_pred HHHH---cCCE---EEEecCC---------------------CCCCHHHHHHHHH------HhccCCCCEEEEEcCCccc
Confidence 8875 5532 2211121 2567777665543 2222357899999999997
Q ss_pred ccccCH-HHHHHHhhcCCcEEEEEeecCCCCC-----ccceEEEecCCCCeEEEEeccCCh-hhhhhcc--c-cCCcccc
Q 010950 279 VRVADP-TFLGYFIDKGVSAGAKVVRKAYPQE-----KVGVFVRRGKGGPLTVVEYSELDP-SLASAIN--Q-ETGRLRF 348 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~~~~~~~kvv~k~~p~e-----~vGvi~~~~~~g~~~vvEYsel~~-~~~~~~~--~-~~g~~~f 348 (497)
....+. .++..+...++++++-+++-.+|.+ .++|++. .+| .++.+++-+. ..++... . ... ..|
T Consensus 120 i~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d--~~g--~~l~fsr~~ip~~r~~~~~~~~~~~-~~~ 194 (264)
T 3k8d_A 120 IPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLD--AEG--YALYFSRATIPWDRDRFAEGLETVG-DNF 194 (264)
T ss_dssp CCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEEC--TTS--BEEEEESSCCSCCHHHHHHCSSCCC-SCC
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEEC--CCC--eEEEEecCCCCCCCccccccccccC-Ccc
Confidence 543333 2455566677888766665443322 2344432 356 4777887542 2221100 0 011 123
Q ss_pred cccceeeEEEehHHHHHHhh
Q 010950 349 CWSNVCLHMFTLDFLNQVAN 368 (497)
Q Consensus 349 ~~gNi~~~~f~l~fL~~~~~ 368 (497)
..|++++.|+.++|++...
T Consensus 195 -~~~~GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 195 -LRHLGIYGYRAGFIRRYVN 213 (264)
T ss_dssp -EEECSEEEEEHHHHHHHHH
T ss_pred -eEEEEEEEECHHHHHHHHh
Confidence 5699999999999998764
No 17
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=98.74 E-value=1.8e-07 Score=92.17 Aligned_cols=186 Identities=16% Similarity=0.123 Sum_probs=110.2
Q ss_pred EEEEEecCCCccccCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHH
Q 010950 120 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (497)
Q Consensus 120 vavvlLAGG~GTRLG~---~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (497)
+.+|+||||.||||+. ..||.++|| .||+++++.++++... ++. .++|.| .+..+.+
T Consensus 3 ~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~~---------------gi~-~i~vv~-~~~~~~i 62 (281)
T 3juk_A 3 KKCLFPAAGYGTRFLPITKTIPKEMLPI---VDKPLIQYAVEEAMEA---------------GCE-VMAIVT-GRNKRSL 62 (281)
T ss_dssp CEEEEECCSCCGGGTTGGGTSCGGGCBS---SSSBHHHHHHHHHHHH---------------TCC-EEEEEE-CTTHHHH
T ss_pred eEEEEECCcCCcccCccccCCCcccceE---CCEEHHHHHHHHHHhC---------------CCC-EEEEEe-cCCHHHH
Confidence 4679999999999986 889999999 7999999999988541 111 224444 4667899
Q ss_pred HHHHhhcCCCCCC------------------CCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHH
Q 010950 197 RKYFEGHKYFGLE------------------SDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLL 258 (497)
Q Consensus 197 ~~~~~~~~~FGl~------------------~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l 258 (497)
.++|.+...+.-. ..+|.+..|. .|.|.|+......
T Consensus 63 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~---------------------~~~Gt~~al~~a~----- 116 (281)
T 3juk_A 63 EDYFDTSYEIEHQIQGTNKENALKSIRNIIEKCCFSYVRQK---------------------QMKGLGHAILTGE----- 116 (281)
T ss_dssp HHHTSCCC--------CCHHHHHHHHHHHHHHCEEEEEECS---------------------SCCCHHHHHHHTH-----
T ss_pred HHHHhcchhhhhhhhcccchhhhhhhhccccCccEEEEecC---------------------CCCCcHHHHHHHH-----
Confidence 9998764222100 0112222221 2567766554332
Q ss_pred HHHHHcCceEEEEEeCCccccccc-----CHHHHHHHhhcCCcE-EEEEeecCCCCCccceEEEecC--CCCeEEEEecc
Q 010950 259 EDMATRGIKYIDCYGVDNALVRVA-----DPTFLGYFIDKGVSA-GAKVVRKAYPQEKVGVFVRRGK--GGPLTVVEYSE 330 (497)
Q Consensus 259 ~~l~~~G~~yi~v~~vDN~L~~~~-----Dp~~lG~~~~~~~~~-~~kvv~k~~p~e~vGvi~~~~~--~g~~~vvEYse 330 (497)
+.+ +-++++|.+.|++ .... --.++.++...++.+ ++..++...+. .-|++... . +|...|.++.|
T Consensus 117 ~~l---~~~~~lv~~~D~~-~~~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-~~g~v~~~-~~~~g~~~v~~~~E 190 (281)
T 3juk_A 117 ALI---GNEPFAVILADDL-CISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEVS-KYGVIRGE-WLEEGVYEIKDMVE 190 (281)
T ss_dssp HHH---CSSCEEEECTTEE-EECTTSCCHHHHHHHHHHHHCSCEEEEEECCTTTGG-GSEEEEEE-EEETTEEEEEEEEE
T ss_pred HHc---CCCCEEEEeCCee-ccCccchHHHHHHHHHHHHcCCCEEEEEEechhhcc-cCCEEEec-cCCCCceEEeEEEE
Confidence 222 2368999999995 4443 233666676666622 23333333333 34766553 2 35345767766
Q ss_pred CChhhhhhccccCCcccccccceeeEEEehHHHHHH
Q 010950 331 LDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQV 366 (497)
Q Consensus 331 l~~~~~~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~ 366 (497)
-|.... . .-+..|+++++|+.+.++.+
T Consensus 191 kp~~~~-------~--~~~~~~~GiYi~~~~~l~~l 217 (281)
T 3juk_A 191 KPNQED-------A--PSNLAVIGRYILTPDIFEIL 217 (281)
T ss_dssp SCCTTT-------C--SCSEEEEEEEEECTTHHHHH
T ss_pred CcCCCC-------C--CcceeEEEEEEECHHHHHHH
Confidence 553110 0 11246999999999888543
No 18
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=98.72 E-value=6.6e-07 Score=93.75 Aligned_cols=180 Identities=18% Similarity=0.153 Sum_probs=107.3
Q ss_pred CCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHH
Q 010950 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (497)
Q Consensus 118 gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (497)
.++.+|+||||.||||+.+.||.++|+ .||+++++.++++... +.. .++|.|+. ..+.+.
T Consensus 4 ~~~~aiIlA~G~g~Rl~~~~pK~l~~i---~gkpli~~~l~~l~~~---------------~~~-~iivv~~~-~~~~i~ 63 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYSDLPKVLHTI---AGKPMVKHVIDTAHQL---------------GSE-NIHLIYGH-GGDLMR 63 (456)
T ss_dssp CCEEEEEECCCCCGGGCSSSCGGGSEE---TTEEHHHHHHHHHHHT---------------TCS-CEEEEECT-THHHHH
T ss_pred CcceEEEECCCCCcccCCCCCccccEE---CCccHHHHHHHHHHhC---------------CCC-cEEEEeCC-CHHHHH
Confidence 367899999999999998889999999 8999999999987541 111 23555554 457777
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCch-hhHhhhhccHHHHHHHcCceEEEEEeCCc
Q 010950 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGG-VYSALKSSKLLEDMATRGIKYIDCYGVDN 276 (497)
Q Consensus 198 ~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGg-i~~aL~~sg~l~~l~~~G~~yi~v~~vDN 276 (497)
+++.+. + +.+..|+ .+.|.++ ++.++.. + ..-+++++.+.|+
T Consensus 64 ~~~~~~---~-----~~~v~~~---------------------~~~g~~~~~~~~~~~------~--~~~~~vlv~~~D~ 106 (456)
T 2v0h_A 64 THLANE---Q-----VNWVLQT---------------------EQLGTAHAVQQAAPF------F--KDNENIVVLYGDA 106 (456)
T ss_dssp HHTTTC---C-----CEEEECS---------------------CCCCHHHHHHHHGGG------C--CTTSEEEEEETTC
T ss_pred HHhhcC---C-----cEEEeCC---------------------CCCCcHHHHHHHHHh------c--CCCCeEEEEcCCc
Confidence 777652 2 3333321 1335443 3333321 1 1257999999999
Q ss_pred ccccccCHH-HHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccceee
Q 010950 277 ALVRVADPT-FLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCL 355 (497)
Q Consensus 277 ~L~~~~Dp~-~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~ 355 (497)
+|....+.. ++..+.. .++++-+.+..+|... |.+... +|+ +.++.|-++..... . .....|++.
T Consensus 107 P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~-g~v~~~--~g~--v~~~~ek~~~~~~~-~------~~~~~~~Gi 172 (456)
T 2v0h_A 107 PLITKETLEKLIEAKPE--NGIALLTVNLDNPTGY-GRIIRE--NGN--VVAIVEQKDANAEQ-L------NIKEVNTGV 172 (456)
T ss_dssp TTCCHHHHHHHHHHCCT--TSEEEEEEECSSCTTS-CEEEEE--TTE--EEEEECTTTCCHHH-H------TCCEEEEEE
T ss_pred ceeCHHHHHHHHHHHhc--CCEEEEEeecCCCCcc-ceEEEc--CCc--EEEEEECCCCChhH-h------cCcEEEEEE
Confidence 875433322 3333333 4566555555555443 555543 453 44444432211000 0 112569999
Q ss_pred EEEehHHHHHHhh
Q 010950 356 HMFTLDFLNQVAN 368 (497)
Q Consensus 356 ~~f~l~fL~~~~~ 368 (497)
+.|+.+.|.+.++
T Consensus 173 y~~~~~~l~~~l~ 185 (456)
T 2v0h_A 173 MVSDGASFKKWLA 185 (456)
T ss_dssp EEEEHHHHHHHHT
T ss_pred EEEEHHHHHHHHH
Confidence 9999998876664
No 19
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=98.71 E-value=1.4e-07 Score=94.73 Aligned_cols=208 Identities=14% Similarity=0.095 Sum_probs=120.6
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+. ||.++|++ +.|++++++.++++... ++. .++|.|.....+.+.+
T Consensus 5 ~~~~vIlAaG~g~R~~~--~K~l~~ig-~~g~pli~~~l~~~~~~---------------~~~-~i~vv~~~~~~~~~~~ 65 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS--LKQLDGIG-PGGDTIMDYSVYDAIRA---------------GFG-RLVFVIRHSFEKEFRE 65 (303)
T ss_dssp CCEEEEECTTCBCTTSS--BCCCCCCS-TTSCCHHHHHHHHHHHH---------------TCC-EEEEEECGGGHHHHHH
T ss_pred ceEEEEECCCCcccCCC--CceEeEcC-CCCeeHHHHHHHHHHHC---------------CCC-eEEEEcCchHHHHHHH
Confidence 56789999999999986 89998874 26999999999987531 111 3356666444589999
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
+|.....++. +|.+..|+..- +.....+.... ..|-|.|+........ + -+.+.|.+.|++.
T Consensus 66 ~~~~~~~~~~---~i~~~~~~~~~-~~~~~~~~~~~-----~~~~Gt~~al~~a~~~-----i----~~~~lV~~gD~l~ 127 (303)
T 3pnn_A 66 KILTKYEGRI---PVELVFQELDR-LPEGFSCPEGR-----EKPWGTNHAVLMGRDA-----I----REPFAVINADDFY 127 (303)
T ss_dssp HTHHHHTTTS---CEEEEECCTTC-CCTTCCCCTTC-----CSCCCHHHHHHTTTTT-----C----CSCEEEEESSCBC
T ss_pred HHHHHhccCC---cEEEEeccccc-ccccccccccc-----cccCCcHHHHHHHHHh-----c----CCCEEEEECCeec
Confidence 9976433332 57777777311 11111111110 1367888776654432 1 1456788899963
Q ss_pred cccc-CHHHHHHHhh---cCCcEEEEEeecCCC-CCcc----ceEEEecCCCCeEEEEeccCChhhh-h---hccccCCc
Q 010950 279 VRVA-DPTFLGYFID---KGVSAGAKVVRKAYP-QEKV----GVFVRRGKGGPLTVVEYSELDPSLA-S---AINQETGR 345 (497)
Q Consensus 279 ~~~~-Dp~~lG~~~~---~~~~~~~kvv~k~~p-~e~v----Gvi~~~~~~g~~~vvEYsel~~~~~-~---~~~~~~g~ 345 (497)
... --.++.++.+ .++++++-+.+-.+| .+.+ |++... .+|+ |+++.|-|+... . ...+..|.
T Consensus 128 -~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~g~~~~G~v~~d-~~g~--v~~i~Ekp~~~~~~~~~~~~~~~g~ 203 (303)
T 3pnn_A 128 -GRNGFEVLARKLMTLEGKQGEYCMVGYRVGNTLSESGGVSRGVCQVD-EKHL--LTGVVERTGIERTDGTISFRDETGK 203 (303)
T ss_dssp -CHHHHHHHHHHHHTTTTCSSEEEEEEEEGGGSCBTTBCEEEEEEEEC-TTSB--EEEEEEEEEEEEETTEEEEECTTSC
T ss_pred -CHHHHHHHHHHHHHhccccCceEEEEEECCCccCccCceeeeeEeeC-CCCc--EEEEEECCCCccccccccccccccc
Confidence 221 1236677764 567777666665556 4443 555443 3564 444444332100 0 00001111
Q ss_pred ----ccccccceeeEEEehHHHHHHh
Q 010950 346 ----LRFCWSNVCLHMFTLDFLNQVA 367 (497)
Q Consensus 346 ----~~f~~gNi~~~~f~l~fL~~~~ 367 (497)
..-+..|+++++|+.++++.+.
T Consensus 204 ~~~~~~~~~i~~GiY~f~~~~~~~l~ 229 (303)
T 3pnn_A 204 ICTLAEDAPVSMNMWGFTPDYFDYSE 229 (303)
T ss_dssp EEEECTTCEEEEEEEEECTHHHHHHH
T ss_pred cccCCCCCEEEEEEEEECHHHHHHHH
Confidence 0123569999999999876553
No 20
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.71 E-value=4.2e-07 Score=95.39 Aligned_cols=179 Identities=20% Similarity=0.181 Sum_probs=108.9
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+.+.||.++|+ .||+++++.++++.+. ++ -.++|.|... ++.+.+
T Consensus 8 ~~~aiIlA~G~g~Rl~~~~pK~l~~i---~g~pli~~~l~~l~~~---------------~~-~~i~vv~~~~-~~~i~~ 67 (459)
T 4fce_A 8 SMSVVILAAGKGTRMYSDLPKVLHPL---AGKPMVQHVIDAAMKL---------------GA-QHVHLVYGHG-GELLKK 67 (459)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHHH---------------TC-SCEEEEESSC-HHHHHH
T ss_pred cceEEEECCCCCccCCCCCCcccCee---CCeeHHHHHHHHHHhC---------------CC-CcEEEEeCCC-HHHHHH
Confidence 78999999999999998899999999 8999999999987542 11 1235655544 778888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCch-hhHhhhhccHHHHHHHcCceEEEEEeCCcc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGG-VYSALKSSKLLEDMATRGIKYIDCYGVDNA 277 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGg-i~~aL~~sg~l~~l~~~G~~yi~v~~vDN~ 277 (497)
++++. .+.+..|.. +.|.++ ++.++..- ...+++++.+.|.+
T Consensus 68 ~~~~~--------~~~~v~~~~---------------------~~g~~~~i~~~~~~~--------~~~~~~lv~~~D~P 110 (459)
T 4fce_A 68 TLADP--------SLNWVLQAE---------------------QLGTGHAMQQAAPHF--------ADDEDILMLYGDVP 110 (459)
T ss_dssp HC-------------CEEECSS---------------------CCCHHHHHHHHGGGS--------CTTSEEEEEETTCT
T ss_pred HhccC--------CcEEEeCCC---------------------CCCcHHHHHHHHHhc--------CCCCcEEEEeCCcc
Confidence 87642 122333211 335443 44443321 13589999999998
Q ss_pred cccccCHHHHHHHhh--cCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccceee
Q 010950 278 LVRVADPTFLGYFID--KGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCL 355 (497)
Q Consensus 278 L~~~~Dp~~lG~~~~--~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~ 355 (497)
|... ..+.-+++ ...++++-+++..+|... |.+... +| .+.++.|-++.... .......|+++
T Consensus 111 ~i~~---~~i~~l~~~~~~~~~~~~~~~~~~~~~~-g~v~~~--~g--~v~~~~ek~~~~~~-------~~~~~~~~~Gi 175 (459)
T 4fce_A 111 LISV---DTLQRLLAAKPEGGIGLLTVKLDNPSGY-GRIVRE--NG--DVVGIVEHKDASDA-------QREINEINTGI 175 (459)
T ss_dssp TCCH---HHHHHHHHHCCTTSEEEEEEECSCCTTS-CEEEEE--TT--EEEEEECGGGCCTT-------GGGCCEEEEEE
T ss_pred cCCH---HHHHHHHHHHhhCCEEEEEEecCCCCcc-cEEEeC--CC--cEEEEEECCCCChH-------HhhccEEEEEE
Confidence 6443 33332222 235566556666666444 666654 45 45555543321110 00112469999
Q ss_pred EEEehHHHHHHhhc
Q 010950 356 HMFTLDFLNQVANG 369 (497)
Q Consensus 356 ~~f~l~fL~~~~~~ 369 (497)
++|+.+++.+.++.
T Consensus 176 y~~~~~~l~~~l~~ 189 (459)
T 4fce_A 176 LVANGRDLKRWLSL 189 (459)
T ss_dssp EEEEHHHHHHHHHT
T ss_pred EEEEHHHHHHHHHH
Confidence 99999999877653
No 21
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=98.70 E-value=1e-07 Score=93.79 Aligned_cols=186 Identities=18% Similarity=0.206 Sum_probs=109.6
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+ ||.+.|| .||+++++.++++.+. ++. .++|-|. ++.+.+
T Consensus 9 ~~~aIIlA~G~stRl~---~K~L~~i---~GkPli~~~l~~l~~~---------------~i~-~VvVvt~---~~~i~~ 63 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP---GKALVDI---AGKPMIQHVYESAIKS---------------GAE-EVVIATD---DKRIRQ 63 (256)
T ss_dssp CCEEEEECCCC---CT---TGGGCEE---TTEEHHHHHHHHHHHT---------------TCS-EEEEEES---CHHHHH
T ss_pred CceEEEEcCCCCCCCC---CCCeeeE---CCchHHHHHHHHHHhC---------------CCC-EEEEECC---HHHHHH
Confidence 6789999999999997 8999999 8999999999987531 111 2355553 588888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++ ||.+ +.+-.| ..|.|.+.+..++.. +...+.+++.+++.|++|
T Consensus 64 ~~~~---~g~~---v~~~~~---------------------~~~~Gt~~i~~a~~~------l~~~~~d~vlv~~gD~Pl 110 (256)
T 3tqd_A 64 VAED---FGAV---VCMTSS---------------------DHQSGTERIAEAAVA------LGFEDDEIIVCLQGDEPL 110 (256)
T ss_dssp HHHH---TTCE---EEECCT---------------------TCCSHHHHHHHHHHH------TTCCTTCEEEEECTTCCC
T ss_pred HHHH---cCCe---EEEeCC---------------------CCCCcHHHHHHHHHH------hCcCCCCEEEEEeCCccc
Confidence 8875 5542 221111 125677776665432 211357899999999997
Q ss_pred ccccCH-HHHHHHhhc-CCcEEEEEeec------CCCCCccceEEEecCCCCeEEEEeccCChh-hhhhcc---ccCCcc
Q 010950 279 VRVADP-TFLGYFIDK-GVSAGAKVVRK------AYPQEKVGVFVRRGKGGPLTVVEYSELDPS-LASAIN---QETGRL 346 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~-~~~~~~kvv~k------~~p~e~vGvi~~~~~~g~~~vvEYsel~~~-~~~~~~---~~~g~~ 346 (497)
....+- .++..+... ++++++-+++- .+|+ .++|++. .+| .++.+++-+-- .++... +.....
T Consensus 111 i~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~-~vkvv~d--~~g--~~l~fsr~pip~~r~~~~~~~~~~~~~ 185 (256)
T 3tqd_A 111 IPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPH-STKVVLN--RRN--YALYFSHAPIPWGRDTFSDKENLQLNG 185 (256)
T ss_dssp CCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTT-SCEEEEC--TTS--BEEEEESSCSSCCTTTTTCGGGCCCSS
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCC-ccEEEEC--CCC--EEeEEecCCCCCCCcccccccccccCC
Confidence 543332 234455443 55666555442 2332 2455443 356 36777765431 111000 000011
Q ss_pred cccccceeeEEEehHHHHHHhh
Q 010950 347 RFCWSNVCLHMFTLDFLNQVAN 368 (497)
Q Consensus 347 ~f~~gNi~~~~f~l~fL~~~~~ 368 (497)
.| ..|++++.|+.++|++...
T Consensus 186 ~~-~~~~GiY~y~~~~l~~~~~ 206 (256)
T 3tqd_A 186 SH-YRHVGIYAYRVGFLEEYLS 206 (256)
T ss_dssp CC-EEEEEEEEEEHHHHHHHHH
T ss_pred cc-eEEEEEEEcCHHHHHHHHh
Confidence 23 5799999999999998864
No 22
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=98.67 E-value=2.4e-07 Score=92.98 Aligned_cols=191 Identities=18% Similarity=0.178 Sum_probs=106.1
Q ss_pred CEEEEEecCCCccccC--C--CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchH
Q 010950 119 KLAVLLLSGGQGTRLG--S--SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (497)
Q Consensus 119 kvavvlLAGG~GTRLG--~--~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (497)
++.+|+||||.||||+ . +.||.++|+. .|++++++.++++... + -.++|.|.....+
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~--gg~pli~~~l~~l~~~----------------~-~~i~vv~~~~~~~ 64 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLF--DHKSLFELSFKRNASL----------------V-DETLIVCNEKHYF 64 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTB--TTBCHHHHHHHHHHTT----------------C-SEEEEEEEGGGHH
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECC--CCCCHHHHHHHHHHcc----------------C-CCEEEEEChhHHH
Confidence 5678999999999996 2 5799998872 4899999999987531 1 1346777665557
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeC
Q 010950 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 274 (497)
Q Consensus 195 ~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~v 274 (497)
.+.+++++. +|++ ++.+..|+ .|.|.|+........ + ..-.++++.+.
T Consensus 65 ~i~~~~~~~--~~~~--~~~~i~~~---------------------~~~gt~~al~~a~~~-----l--~~~~~~lv~~~ 112 (308)
T 2qh5_A 65 LALEEIKNE--IKNK--SVGFLLES---------------------LSKNTANAIALSALM-----S--DKEDLLIVTPS 112 (308)
T ss_dssp HHHHHTTTT--CSSC--EEEEEEES---------------------SCCCHHHHHHHHHHT-----S--CTTSEEEEEES
T ss_pred HHHHHHHHh--hCCC--ccEEEeCC---------------------CCCChHHHHHHHHHH-----h--CCCCeEEEEcC
Confidence 888888763 4542 34444332 145777765543221 1 12357999999
Q ss_pred Cccccccc-CHHHHHH---HhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhh-hhhccccCCccccc
Q 010950 275 DNALVRVA-DPTFLGY---FIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSL-ASAINQETGRLRFC 349 (497)
Q Consensus 275 DN~L~~~~-Dp~~lG~---~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~-~~~~~~~~g~~~f~ 349 (497)
|+++.... --.++.. +...+.++++.+.+. .+...-|++... .+| .|+++.|-|... +.... ..| .|
T Consensus 113 D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~~~~g~i~~d-~~~--~V~~~~Ekp~~~~~~~~~-~~g--~~- 184 (308)
T 2qh5_A 113 DHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSID-KPNTEFGYIESP-NGL--DVKRFIEKPSLDKAIEFQ-KSG--GF- 184 (308)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECS-SCCTTSEEEECS-SSS--BCSEEEESCCHHHHHHHH-HHC--CE-
T ss_pred CccccCHHHHHHHHHHHHHHHhcCCEEEEEEecC-CCCCCceEEEEC-CCC--EEEEEEECCChHHHHHHh-hcC--Ce-
Confidence 99853221 1234544 445666666655554 444455777542 234 344555544321 11100 011 12
Q ss_pred ccceeeEEEehHHHHHHhh
Q 010950 350 WSNVCLHMFTLDFLNQVAN 368 (497)
Q Consensus 350 ~gNi~~~~f~l~fL~~~~~ 368 (497)
..|+++++|+.+++.+.+.
T Consensus 185 ~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 185 YFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp EEEEEEEEEEHHHHHHHHH
T ss_pred EEEeEEEEEEHHHHHHHHH
Confidence 4699999999887644443
No 23
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=98.62 E-value=3.8e-07 Score=88.26 Aligned_cols=190 Identities=17% Similarity=0.224 Sum_probs=107.7
Q ss_pred EEEEEecCCCccccCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHH
Q 010950 120 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (497)
Q Consensus 120 vavvlLAGG~GTRLG~---~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (497)
+.+|+||||.||||+. +.||.++|+ .||+++++.++++.+ .++. .++|.|+. .++.+
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~l~~i---~gkpli~~~l~~l~~---------------~g~~-~i~vv~~~-~~~~i 62 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKPMVEI---GGKPILWHIMKMYSV---------------HGIK-DFIICCGY-KGYVI 62 (259)
T ss_dssp CEEEEEECSCC--------CCCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEECT-THHHH
T ss_pred cEEEEECCCCcccCCCccCCCCccccEE---CCEEHHHHHHHHHHH---------------CCCC-EEEEEccc-CHHHH
Confidence 4678999999999985 679999999 799999999988754 1211 33666654 45789
Q ss_pred HHHHhhcCCCCCCCCcEEEEEcCCcceee-cCCceeecCCCcc----ccccCCCchhhHhhhhccHHHHHHHcCceEEEE
Q 010950 197 RKYFEGHKYFGLESDQVTFFQQGTIPCVS-KDGRFIMETPYKV----AKAPDGNGGVYSALKSSKLLEDMATRGIKYIDC 271 (497)
Q Consensus 197 ~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~-~~g~~~l~~~~~~----~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v 271 (497)
.+++.+...++ ..+.+..|+. .+. ..+. ..++.+ ...+.|.|+........ + . +-+++.+
T Consensus 63 ~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~---~~~~~v~~~~~~~~~gt~~al~~a~~~-----~-~-~~~~~lv 127 (259)
T 1tzf_A 63 KEYFANYFLHM---SDVTFHMAEN--RMEVHHKR---VEPWNVTLVDTGDSSMTGGRLKRVAEY-----V-K-DDEAFLF 127 (259)
T ss_dssp HHHHHTHHHHH---SCEEEEGGGT--EEEETTCC---CCCCEEEEEECCSSCCHHHHHHHTGGG-----T-T-TSSCEEE
T ss_pred HHHHhhccccc---cccccccccc--ceeeeecc---ccccceeeeecccccCcHHHHHHHHHh-----c-C-CCCcEEE
Confidence 99998642111 1233333321 000 0000 011111 11356888766544321 1 1 3478889
Q ss_pred EeCCcccccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCccccccc
Q 010950 272 YGVDNALVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWS 351 (497)
Q Consensus 272 ~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~g 351 (497)
.+.|++. ...-..++..+...++++++..++ .| ..-|++... +| .|+++.|-|.. . . ...
T Consensus 128 ~~~D~~~-~~~~~~~~~~~~~~~~~~t~~~~~--~~-~~~g~v~~~--~g--~v~~~~ekp~~---------~--~-~~~ 187 (259)
T 1tzf_A 128 TYGDGVA-DLDIKATIDFHKAHGKKATLTATF--PP-GRFGALDIQ--AG--QVRSFQEKPKG---------D--G-AMI 187 (259)
T ss_dssp EETTEEE-CCCHHHHHHHHHHHCCSEEEEEEC--CC-CCSEEEEEE--TT--EEEEEEESCSC---------C--S-CCE
T ss_pred EECCEec-ccCHHHHHHHHHHhCCeEEEEEec--CC-CCccEEEEc--CC--EEEEEEecCCC---------C--C-ceE
Confidence 9999963 332234777777777777654332 23 344766654 45 46666664321 0 1 246
Q ss_pred ceeeEEEehHHHH
Q 010950 352 NVCLHMFTLDFLN 364 (497)
Q Consensus 352 Ni~~~~f~l~fL~ 364 (497)
|+++++|+.++++
T Consensus 188 ~~Giy~~~~~~l~ 200 (259)
T 1tzf_A 188 NGGFFVLNPSVID 200 (259)
T ss_dssp ECCCEEECGGGGG
T ss_pred EEEEEEeCHHHHH
Confidence 8899999998873
No 24
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.60 E-value=1e-06 Score=92.01 Aligned_cols=197 Identities=13% Similarity=0.234 Sum_probs=117.4
Q ss_pred CEEEEEecCCCccccC---CCCCCccccccCCCCC-ChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchH
Q 010950 119 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGK-SLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (497)
Q Consensus 119 kvavvlLAGG~GTRLG---~~~PKg~~~i~l~sgk-sllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (497)
++.+|+||||.||||+ .+.||.++|+ .|+ +++++.++++.+ .++. .++|.|. +.++
T Consensus 12 ~~~avILAaG~gtRl~plT~~~pK~llpi---~gk~pli~~~l~~l~~---------------~gi~-~i~vv~~-~~~~ 71 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKELTDRRAKPAVYF---GGKARIIDFALSNALN---------------SGIR-RIGVATQ-YKAH 71 (420)
T ss_dssp GEEEEEEECCCCGGGGGGGSSSCGGGSEE---TTTEETHHHHHHHHHH---------------TTCC-EEEEEEC-TTCH
T ss_pred ceEEEEEcCCCCCccchhhcCCccccccc---CCCCcHHHHHHHHHHh---------------CCCC-eEEEEeC-CChH
Confidence 5778999999999998 7789999999 799 999999998754 1211 2355554 4568
Q ss_pred HHHHHHhhcCCCCCCC----CcEEEEEcCCcceeecCCceeecCCCcccccc---CCCchhhHhhhhccHHHHHHHcCce
Q 010950 195 ATRKYFEGHKYFGLES----DQVTFFQQGTIPCVSKDGRFIMETPYKVAKAP---DGNGGVYSALKSSKLLEDMATRGIK 267 (497)
Q Consensus 195 ~t~~~~~~~~~FGl~~----~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P---~GhGgi~~aL~~sg~l~~l~~~G~~ 267 (497)
.+.+++.+. +|+.. ..+.+.. . ......| .|.++..... ++.+...+.+
T Consensus 72 ~i~~~~~~~--~~~~~~~~~~~v~i~~-----~------------~~~~~~~~~~~Gt~~al~~a-----~~~l~~~~~~ 127 (420)
T 3brk_X 72 SLIRHLQRG--WDFFRPERNESFDILP-----A------------SQRVSETQWYEGTADAVYQN-----IDIIEPYAPE 127 (420)
T ss_dssp HHHHHHHHH--SCCCCGGGTCEEEEEC-----C------------C-------CCCCHHHHHHTT-----HHHHHHHCCS
T ss_pred HHHHHHhhh--hccccccccCCEEEeC-----c------------cccccCCccccCCHHHHHHH-----HHHHHhcCCC
Confidence 899999864 45431 1222111 0 0000012 4665554432 2334333568
Q ss_pred EEEEEeCCcccccccCHHHHHHHhhcCCcEEEEEeec--CCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCc
Q 010950 268 YIDCYGVDNALVRVADPTFLGYFIDKGVSAGAKVVRK--AYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGR 345 (497)
Q Consensus 268 yi~v~~vDN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k--~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~ 345 (497)
++++.+.|++. ...--.++..+...++++++-+.+. ..+ ..-|++... .+| .|+++.|-|........ ..
T Consensus 128 ~~lv~~~D~~~-~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~-~~~g~v~~d-~~g--~v~~~~ekp~~~~~~~~-~~-- 199 (420)
T 3brk_X 128 YMVILAGDHIY-KMDYEYMLQQHVDSGADVTIGCLEVPRMEA-TGFGVMHVN-EKD--EIIDFIEKPADPPGIPG-NE-- 199 (420)
T ss_dssp EEEEEESSCEE-CBCTHHHHHHHHHTTCSEEEEEEEEETTGG-GGSEEEEEC-TTS--BEEEEEESCSSCCCBTT-BT--
T ss_pred EEEEecccEEE-chHHHHHHHHHHHcCCeEEEEEeecCcccc-CcccEEEEC-CCC--cEEEeEeCCCccccccc-cc--
Confidence 99999999953 3333347778888888876655442 223 244776653 345 35555554321100000 00
Q ss_pred ccccccceeeEEEehHHHHHHhh
Q 010950 346 LRFCWSNVCLHMFTLDFLNQVAN 368 (497)
Q Consensus 346 ~~f~~gNi~~~~f~l~fL~~~~~ 368 (497)
.....|+++++|+.+++.+.++
T Consensus 200 -~~~~~~~Giy~~~~~~l~~~l~ 221 (420)
T 3brk_X 200 -GFALASMGIYVFHTKFLMEAVR 221 (420)
T ss_dssp -TEEEEEEEEEEEEHHHHHHHHT
T ss_pred -cceEEeeeeEEEeHHHHHHHHH
Confidence 1235699999999998876664
No 25
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.56 E-value=9.1e-07 Score=93.23 Aligned_cols=182 Identities=16% Similarity=0.142 Sum_probs=111.5
Q ss_pred EEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHHH
Q 010950 120 LAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKY 199 (497)
Q Consensus 120 vavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~ 199 (497)
-.+|+||||.||||+.+.||.++|+ .||+++++.++++.+ .++. .++|.|+. ..+.+.++
T Consensus 12 ~~~vIlAaG~g~R~~~~~pK~l~~i---~gkpli~~~l~~l~~---------------~g~~-~iivv~~~-~~~~i~~~ 71 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKSDLPKVLHKV---AGISMLEHVFRSVGA---------------IQPE-KTVTVVGH-KAELVEEV 71 (468)
T ss_dssp EEEEEECCCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHHT---------------TCCS-EEEEEECT-THHHHHHS
T ss_pred CcEEEEcCCCCccCCCCCCcEeeEE---CCccHHHHHHHHHHh---------------cCCC-CEEEEECC-CHHHHHHH
Confidence 3578999999999998889999999 899999999998743 1111 23555544 45666665
Q ss_pred HhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCcccc
Q 010950 200 FEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNALV 279 (497)
Q Consensus 200 ~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L~ 279 (497)
+.+ .+.+..|+ .+.|.++..... ++.+ ...-+++++.+.|.+|.
T Consensus 72 ~~~---------~i~~v~~~---------------------~~~G~~~sl~~a-----~~~~-~~~~~~vlv~~~D~P~i 115 (468)
T 1hm9_A 72 LAG---------QTEFVTQS---------------------EQLGTGHAVMMT-----EPIL-EGLSGHTLVIAGDTPLI 115 (468)
T ss_dssp SSS---------SSEEEECS---------------------SCCCHHHHHHTT-----HHHH-TTCCSEEEEEETTCTTC
T ss_pred hCC---------CcEEEeCC---------------------ccCChHHHHHHH-----HHHh-ccCCCeEEEEeCCcccc
Confidence 543 23333221 133555544332 1223 22257999999999875
Q ss_pred cccCH-HHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccceeeEEE
Q 010950 280 RVADP-TFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMF 358 (497)
Q Consensus 280 ~~~Dp-~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~~~f 358 (497)
...+. .++..+.+.++++++-+.+...|.. -|.+... .+| .|+++.|-+..... .......|+++++|
T Consensus 116 ~~~~i~~l~~~~~~~~~~~~i~~~~~~~~~~-~g~v~~d-~~g--~v~~~~ek~~~~~~-------~~~~~~~~~Giy~f 184 (468)
T 1hm9_A 116 TGESLKNLIDFHINHKNVATILTAETDNPFG-YGRIVRN-DNA--EVLRIVEQKDATDF-------EKQIKEINTGTYVF 184 (468)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEEECSCCTT-SCEEEEC-TTC--CEEEEECTTTCCTT-------GGGCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEeccCCCCc-eeEEEEC-CCC--CEEEEEECCCCChH-------HhcCeEEEEEEEEE
Confidence 44333 2556666778888766666655544 4666553 345 36666554321000 00112568999999
Q ss_pred ehHHHHHHhh
Q 010950 359 TLDFLNQVAN 368 (497)
Q Consensus 359 ~l~fL~~~~~ 368 (497)
+.++|.+.++
T Consensus 185 ~~~~l~~~l~ 194 (468)
T 1hm9_A 185 DNERLFEALK 194 (468)
T ss_dssp EHHHHHHHHT
T ss_pred EHHHHHHHHH
Confidence 9998866654
No 26
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=98.55 E-value=1e-06 Score=84.57 Aligned_cols=178 Identities=17% Similarity=0.190 Sum_probs=104.2
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+ ||.++|+ .|++++++.++++.+ .+.--.++|.|+. +.+.+
T Consensus 2 ~~~aiIlA~G~~~R~~---~K~l~~i---~g~pli~~~i~~~~~---------------~~~~~~ivvv~~~---~~i~~ 57 (245)
T 1h7e_A 2 KAVIVIPARYGSSRLP---GKPLLDI---VGKPMIQHVYERALQ---------------VAGVAEVWVATDD---PRVEQ 57 (245)
T ss_dssp CEEEEEECCSCCSSST---TGGGCEE---TTEEHHHHHHHHHHT---------------CTTCCEEEEEESC---HHHHH
T ss_pred CeEEEEEcCCcCCCCC---CCccccc---CCchHHHHHHHHHHh---------------CCCCCeEEEECCc---HHHHH
Confidence 5788999999999996 9999998 799999999988753 1211134666643 77888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++ +|. .++.-+ ...+.|.++++.++.. + +.+++++.+.|+++
T Consensus 58 ~~~~---~~~-----~~~~~~-------------------~~~~~g~~~~~~~~~~------~---~~~~~lv~~~D~P~ 101 (245)
T 1h7e_A 58 AVQA---FGG-----KAIMTR-------------------NDHESGTDRLVEVMHK------V---EADIYINLQGDEPM 101 (245)
T ss_dssp HHHH---TTC-----EEEECC-------------------SCCSSHHHHHHHHHHH------S---CCSEEEECCTTCTT
T ss_pred HHHH---cCC-----eEEeCC-------------------CccCCcHHHHHHHHHh------C---CCCEEEEEcCCcCc
Confidence 8876 332 222200 0113455666655432 1 46899999999997
Q ss_pred ccccCH-HHHHHHhhc-CCcEEEEEeecCCCC-----CccceEEEecCCCCeEEEEeccCCh-hhhhhccccCCcccccc
Q 010950 279 VRVADP-TFLGYFIDK-GVSAGAKVVRKAYPQ-----EKVGVFVRRGKGGPLTVVEYSELDP-SLASAINQETGRLRFCW 350 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~-~~~~~~kvv~k~~p~-----e~vGvi~~~~~~g~~~vvEYsel~~-~~~~~~~~~~g~~~f~~ 350 (497)
....+- .++..+... ++++++-+.+. ++. ..++++. . ++|+ ++.+++-+. ..+.. ..... .
T Consensus 102 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~g~--~~~~~~~~~~~~r~~-----~~~~~-~ 170 (245)
T 1h7e_A 102 IRPRDVETLLQGMRDDPALPVATLCHAI-SAAEAAEPSTVKVVV-N-TRQD--ALYFSRSPIPYPRNA-----EKARY-L 170 (245)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEEEEEEE-CHHHHTCTTSCEEEE-C-TTCB--EEEEESSCSSCCTTG-----GGCCE-E
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeecC-CHHHhcCCCCcEEEE-C-CCCc--EEEeecCCCCCCccc-----ccCce-e
Confidence 543322 245555555 67776555443 211 1223222 2 3564 444443211 00100 00112 3
Q ss_pred cceeeEEEehHHHHHHh
Q 010950 351 SNVCLHMFTLDFLNQVA 367 (497)
Q Consensus 351 gNi~~~~f~l~fL~~~~ 367 (497)
.|.+.++|+.++|.+..
T Consensus 171 ~~~g~y~~~~~~l~~~~ 187 (245)
T 1h7e_A 171 KHVGIYAYRRDVLQNYS 187 (245)
T ss_dssp EEEEEEEEEHHHHHHGG
T ss_pred EEEEEEEcCHHHHHHHH
Confidence 49999999999987654
No 27
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=98.47 E-value=1.4e-06 Score=85.39 Aligned_cols=183 Identities=13% Similarity=0.109 Sum_probs=107.1
Q ss_pred EEEEEecCCCccccCCCCCCccccccCCCCCChHHHHH-HHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 120 LAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQA-ERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 120 vavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~-e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
+.+|+||||.||||+ +|.+.+| .||+++++.+ +++++ .++. .++|-|. ++.+.+
T Consensus 2 ~~aiIlA~G~stR~~---~K~L~~i---~GkPli~~~i~~~~~~---------------~~~~-~vvVvt~---~~~i~~ 56 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP---GKPLLLI---HDRPMILRVVDQAKKV---------------EGFD-DLCVATD---DERIAE 56 (253)
T ss_dssp EEEEEECCSCCTTST---TGGGSEE---TTEEHHHHHHHHHHTC---------------TTCC-EEEEEES---CHHHHH
T ss_pred eEEEEEeCCCCCCCC---CCceeeE---CCeEhHHHHHHHHHHh---------------cCCC-EEEEECC---HHHHHH
Confidence 468999999999997 5999999 9999999999 87642 1111 3355553 588888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++ ||.+ +.+-.|+ .+.|.+.+..++ +.+...+.+++.+++.|+||
T Consensus 57 ~~~~---~g~~---v~~~~~~---------------------~~~Gt~~i~~a~------~~~~~~~~d~vlv~~gD~Pl 103 (253)
T 4fcu_A 57 ICRA---EGVD---VVLTSAD---------------------HPSGTDRLSEVA------RIKGWDADDIIVNVQGDEPL 103 (253)
T ss_dssp HHHT---TTCC---EEECCTT---------------------CCCHHHHHHHHH------HHHTCCTTCEEEECCTTCTT
T ss_pred HHHH---cCCe---EEEeCCC---------------------CCChHHHHHHHH------HhcCcCCCCEEEEEeCCccc
Confidence 8875 5543 2211111 134554444443 22322356899999999998
Q ss_pred ccccCH-HHHHHHhhc-CCcEEEEEee------cCCCCCccceEEEecCCCCeEEEEecc--CChhhhhhcc--ccCCcc
Q 010950 279 VRVADP-TFLGYFIDK-GVSAGAKVVR------KAYPQEKVGVFVRRGKGGPLTVVEYSE--LDPSLASAIN--QETGRL 346 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~-~~~~~~kvv~------k~~p~e~vGvi~~~~~~g~~~vvEYse--l~~~~~~~~~--~~~g~~ 346 (497)
....+- .++..+.+. +.++++-+++ -.+|.. ++|++. .+|+ ++-+++ +|.. ++... +.+...
T Consensus 104 i~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~-~kvv~d--~~g~--~l~fsr~~ip~~-r~~~~~~~~~~~~ 177 (253)
T 4fcu_A 104 LPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSI-VKVVMS--KQNE--ALYFSRATIPYD-RDGAKRDEPTLHT 177 (253)
T ss_dssp CCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTS-CEEEEC--TTSB--EEEEESSCCSCC-TTTSSSSSCCCCS
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCc-cEEEEC--CCCe--EEEecCCCCCCC-CCccccccccccc
Confidence 543322 244455444 3455544443 234554 565443 3563 555665 3321 11100 000011
Q ss_pred cccccceeeEEEehHHHHHHh
Q 010950 347 RFCWSNVCLHMFTLDFLNQVA 367 (497)
Q Consensus 347 ~f~~gNi~~~~f~l~fL~~~~ 367 (497)
.| ..|++++.|+.++|++..
T Consensus 178 ~~-~~~~GiY~f~~~~l~~~~ 197 (253)
T 4fcu_A 178 QA-FRHLGLYAYRVSLLQEYV 197 (253)
T ss_dssp CC-EEEEEEEEEEHHHHHHHT
T ss_pred ce-eEEEEEEEeCHHHHHHHH
Confidence 23 459999999999999876
No 28
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.46 E-value=9.4e-07 Score=89.27 Aligned_cols=185 Identities=16% Similarity=0.070 Sum_probs=105.9
Q ss_pred EEEEEecCCCccccCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHH
Q 010950 120 LAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDAT 196 (497)
Q Consensus 120 vavvlLAGG~GTRLG~---~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t 196 (497)
+.+|+||||.||||+. ..||.++|+ .|++++++.++++.. .++. .++|.|+ +..+.+
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~gi~-~iivv~~-~~~~~i 72 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKELLPV---VDTPGIELIAAEAAE---------------LGAT-RLAIITA-PNKAGV 72 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEEC-TTCHHH
T ss_pred eEEEEECCCCccccCccccCCCceeeeE---CCEEHHHHHHHHHHh---------------CCCC-EEEEEec-CcHHHH
Confidence 4689999999999975 679999999 699999999998753 1211 2355554 456778
Q ss_pred HHHHhhcCC---------------------CCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhc
Q 010950 197 RKYFEGHKY---------------------FGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSS 255 (497)
Q Consensus 197 ~~~~~~~~~---------------------FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~s 255 (497)
.++|..... +|+ +|.+..|. .|.|.|+........
T Consensus 73 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~---~i~~~~~~---------------------~~~Gt~~al~~a~~~ 128 (323)
T 2pa4_A 73 LAHFERSSELEETLMERGKTDQVEIIRRAADLI---KAVPVTQD---------------------KPLGLGHAVGLAESV 128 (323)
T ss_dssp HHTTSCCHHHHHHHHHTTCHHHHHHTTHHHHHC---EEEEEECS---------------------SCCCHHHHHHTTGGG
T ss_pred HHHHhccchhhhhhhccchhhhhhhhhccccCc---ceEEEeCC---------------------ccCCcHHHHHHHHHH
Confidence 777653210 111 23333222 144777766543221
Q ss_pred cHHHHHHHcCceEEEEEeCCccccc-ccCH-HHHHHHhhcCCcEEEEEeec--CCCCCccceEEEec---CCCCeEEEEe
Q 010950 256 KLLEDMATRGIKYIDCYGVDNALVR-VADP-TFLGYFIDKGVSAGAKVVRK--AYPQEKVGVFVRRG---KGGPLTVVEY 328 (497)
Q Consensus 256 g~l~~l~~~G~~yi~v~~vDN~L~~-~~Dp-~~lG~~~~~~~~~~~kvv~k--~~p~e~vGvi~~~~---~~g~~~vvEY 328 (497)
+ ..+-+++.|.+.|+++ . ..+. .++.++...++. .+-+.+. ..+. .-|++.... .+|...|+.+
T Consensus 129 -----l-~~~~d~~lv~~~D~~~-~~~~~l~~l~~~~~~~~~~-~i~~~~~~~~~~~-~yg~v~~d~~~~~~~~~~V~~~ 199 (323)
T 2pa4_A 129 -----L-DDDEDVVAVMLPDDLV-LPTGVMERMAQVRAEFGGS-VLCAVEVSEADVS-KYGIFEIEADTKDSDVKKVKGM 199 (323)
T ss_dssp -----S-CSSCCEEEEECTTEEE-ESSCHHHHHHHHHHTTCSE-EEEEEECCGGGGG-GSEEEEEEECCSSTTEEEEEEE
T ss_pred -----h-cCCCCeEEEEeCCccc-CchHHHHHHHHHHHhcCCc-EEEEEEecccccC-CccEEEeCCcccCCCceeEEEE
Confidence 1 1234569999999997 4 2322 356666666652 2222221 1222 346654320 2332356666
Q ss_pred ccCChhhhhhccccCCcccccccceeeEEEehHHHHHH
Q 010950 329 SELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQV 366 (497)
Q Consensus 329 sel~~~~~~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~ 366 (497)
.|-|.... . .-+..|+++++|+.++++.+
T Consensus 200 ~Ekp~~~~-------~--~~~~~~~GiY~~~~~~~~~l 228 (323)
T 2pa4_A 200 VEKPAIED-------A--PSRLAATGRYLLDRKIFDAL 228 (323)
T ss_dssp EESCCTTT-------C--SCSEEEEEEEEEETHHHHHH
T ss_pred EECCCCcc-------c--cccEEEEEEEEECHHHHHHH
Confidence 66442100 0 11256899999999877554
No 29
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.45 E-value=4.8e-06 Score=87.51 Aligned_cols=210 Identities=13% Similarity=0.221 Sum_probs=111.3
Q ss_pred CEEEEEecCCCccccC---CCCCCccccccCCCCC-ChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchH
Q 010950 119 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGK-SLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (497)
Q Consensus 119 kvavvlLAGG~GTRLG---~~~PKg~~~i~l~sgk-sllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (497)
++.+|+||||.||||+ .+.||.|+|+ .|+ +++++.++++.+ .++. .++|.|. +.++
T Consensus 20 ~~~avILAaG~gtRl~plT~~~pK~llpi---~g~~pli~~~l~~l~~---------------~g~~-~i~vv~~-~~~~ 79 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPLTKKRAKPAVPL---GANYRLIDIPVSNCLN---------------SNIS-KIYVLTQ-FNSA 79 (451)
T ss_dssp HEEEEEC------CCTTTTTTSCGGGCEE---TTTEETTHHHHHHHHH---------------TTCC-EEEEEES-CCCH
T ss_pred ceEEEEECCCCCCcccchhcCCcceeeEE---CCcceeHHHHHHHHHH---------------CCCC-EEEEEec-cCHH
Confidence 3678999999999998 6789999999 798 999999998754 1111 2355554 4667
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeC
Q 010950 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 274 (497)
Q Consensus 195 ~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~v 274 (497)
.+.++|.+. +|.+-. .++.++.+.++..+ ..+. -...+.|.|+..... ++.+...+-+++++.+.
T Consensus 80 ~i~~~~~~~--~~~~~~--~~~~~~~v~i~~~~-----~~~~-~~~~~~Gt~~al~~a-----~~~~~~~~~~~~lv~~~ 144 (451)
T 1yp2_A 80 SLNRHLSRA--YASNMG--GYKNEGFVEVLAAQ-----QSPE-NPDWFQGTADAVRQY-----LWLFEEHTVLEYLILAG 144 (451)
T ss_dssp HHHHHHHHH--CC----------CCEEEEEESC-----SSTT-SCCCCCSHHHHHHHT-----HHHHTTSCCSEEEEECS
T ss_pred HHHHHHhhh--hhcccc--cccccCcEEEeccc-----cccc-ccccccCcHHHHHHH-----HHHHHhcCCCeEEEecC
Confidence 888888752 221100 01111111111100 0000 001135766655432 22332234689999999
Q ss_pred CcccccccCHHHHHHHhhcCCcEEEEEeecC--CCCCccceEEEecCCCCeEEEEeccCChhh-hhhcccc---CC----
Q 010950 275 DNALVRVADPTFLGYFIDKGVSAGAKVVRKA--YPQEKVGVFVRRGKGGPLTVVEYSELDPSL-ASAINQE---TG---- 344 (497)
Q Consensus 275 DN~L~~~~Dp~~lG~~~~~~~~~~~kvv~k~--~p~e~vGvi~~~~~~g~~~vvEYsel~~~~-~~~~~~~---~g---- 344 (497)
|++ ....-..++..+...++++++-+.+.. .+. .-|++... .+| +|+++.|-|+.. +....-+ .+
T Consensus 145 D~~-~~~~l~~l~~~~~~~~~~~tl~~~~~~~~~~~-~~g~v~~d-~~~--~v~~~~ekp~~~~~~~~~~~~~~l~~~~~ 219 (451)
T 1yp2_A 145 DHL-YRMDYEKFIQAHRETDADITVAALPMDEKRAT-AFGLMKID-EEG--RIIEFAEKPQGEQLQAMKVDTTILGLDDK 219 (451)
T ss_dssp CEE-CCCCHHHHHHHHHHTTCSEEEEEEEECHHHHT-TSEEEEEC-TTS--BEEEEEESCCHHHHHHTCCCGGGGSCCHH
T ss_pred cEE-EcCCHHHHHHHHHHcCCcEEEEEEEcChhhcc-cCCEEEEC-CCC--CEEEEEECCCchhhccccccccccccccc
Confidence 995 333223577888888888765444322 233 34776653 344 466777665421 1100000 00
Q ss_pred --cccccccceeeEEEehHHHHHHhh
Q 010950 345 --RLRFCWSNVCLHMFTLDFLNQVAN 368 (497)
Q Consensus 345 --~~~f~~gNi~~~~f~l~fL~~~~~ 368 (497)
.......|+++++|+.++|.++++
T Consensus 220 ~~~~~~~~~~~Giy~~~~~~l~~~l~ 245 (451)
T 1yp2_A 220 RAKEMPFIASMGIYVISKDVMLNLLR 245 (451)
T ss_dssp HHHHCCEEEEEEEEEEEHHHHHHHHH
T ss_pred cccCCcceEEeeEEEEcHHHHHHHHH
Confidence 001125699999999999877665
No 30
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=98.42 E-value=5.2e-07 Score=88.32 Aligned_cols=171 Identities=13% Similarity=0.150 Sum_probs=98.8
Q ss_pred EEEecCCCccccC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 122 VLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 122 vvlLAGG~GTRLG---~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
+|+||||.||||+ .+.||.|+|| .||+++++.++++... .++. .++|.+. +.++ +.+
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv---~gkpli~~~l~~l~~~--------------~gi~-~iivv~~-~~~~-~~~ 61 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEA---HGQTLFEHSVNSFAAY--------------FAST-PFLFIVR-NVYD-TAV 61 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEE---TTEEHHHHHHGGGGGG--------------TTTS-CEEEEEE-SSTT-HHH
T ss_pred EEEEcCCCCcccccCCCCCCccccEE---CCeEHHHHHHHHHhcc--------------CCCc-eEEEEEC-chhh-hHH
Confidence 6899999999996 4779999999 8999999999987420 0111 2244444 3444 555
Q ss_pred HHhhc-CCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHH---cCceEEEEEeC
Q 010950 199 YFEGH-KYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT---RGIKYIDCYGV 274 (497)
Q Consensus 199 ~~~~~-~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~---~G~~yi~v~~v 274 (497)
+++++ ..+|.+.. ..+..|+ .|-|+|+....... .+.+ .+-+.+.|.+.
T Consensus 62 ~~~~~~~~~~~~~~-~~~~~~~---------------------~~~Gt~~av~~a~~-----~l~~~~~~~~~~~lV~~g 114 (255)
T 4evw_A 62 FVREKATQLGIKQF-YIAELHT---------------------ETRGQAETVTLGLE-----ELAKQGVDYQGSITVFNI 114 (255)
T ss_dssp HHHHHHHHHTCSSE-EEEEESS---------------------CCSSHHHHHHHHHH-----HHHHTTCCCCSCEEECCT
T ss_pred HHHHHHHHcCCCCc-eEEEeCC---------------------CCCCHHHHHHHHHH-----HHhhcccCCCCcEEEEeC
Confidence 66542 22443211 1233332 25587776555322 2321 23456899999
Q ss_pred CcccccccC-HHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccce
Q 010950 275 DNALVRVAD-PTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNV 353 (497)
Q Consensus 275 DN~L~~~~D-p~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi 353 (497)
|++. ...+ +.+ ..+.+..+-+.+-.+| .-|++... .+|...|+++.|-++ .+ +..|+
T Consensus 115 D~l~-~~~~~~~~-----~~~~~~~i~~~~~~~p--~yG~v~~d-~~g~~~V~~i~EK~~--------~s-----~~~~~ 172 (255)
T 4evw_A 115 DTFR-PNFVFPDI-----SQHSDGYLEVFQGGGD--NWSFAKPE-HAGSTKVIQTAEKNP--------IS-----DLCST 172 (255)
T ss_dssp TEEC-TTCCCCGG-----GGSSSEEEEEEECCSS--CSCEEEES-STTCCBEEEEESSSC--------SS-----SEEEE
T ss_pred CEEE-ecchhHHH-----hhcCCcEEEEEecCCC--ceeEEEEC-CCCCeEEEEEEeccC--------cc-----CcEEE
Confidence 9964 2222 222 3556665555544444 45777664 345234666655311 01 25699
Q ss_pred eeEEEehH
Q 010950 354 CLHMFTLD 361 (497)
Q Consensus 354 ~~~~f~l~ 361 (497)
++++|+-.
T Consensus 173 GiY~f~~~ 180 (255)
T 4evw_A 173 GLYHFNRK 180 (255)
T ss_dssp EEEEESCH
T ss_pred eEEEECcH
Confidence 99999875
No 31
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=98.41 E-value=2.2e-06 Score=81.51 Aligned_cols=177 Identities=19% Similarity=0.197 Sum_probs=102.5
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+ ||.+.|+ .|++++++.++++... +. .++|.|.. +.+.+
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~i---~g~pli~~~l~~~~~~----------------~~-~i~v~~~~---~~i~~ 55 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK---EKPLKNL---LGKPLIRWVVEGLVKT----------------GE-RVILATDS---ERVKE 55 (234)
T ss_dssp CEEEEEECCSCCTTTT---TGGGCEE---TTEEHHHHHHHHHHTT----------------TS-CEEEEESC---HHHHH
T ss_pred ceEEEEEcCCCCCCCC---CCcceeE---CCEEHHHHHHHHHHHh----------------CC-EEEEECCh---HHHHH
Confidence 4778999999999998 9999999 7999999999987531 11 23565543 67777
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++. . .+ +... ...+.|.|+++.++.. -+.+++.+.+.|+|+
T Consensus 56 ~~~~~----~---~~--~~~~-------------------~~~~~g~~~~~~~~~~---------~~~~~vlv~~~D~P~ 98 (234)
T 2y6p_A 56 VVEDL----C---EV--FLTP-------------------SDLPSGSDRVLYVVRD---------LDVDLIINYQGDEPF 98 (234)
T ss_dssp HHTTT----S---EE--EECC-------------------TTCCSHHHHHHHHHTT---------CCCSEEEECCTTCCC
T ss_pred HHHhc----e---EE--EECC-------------------cccccchHHHHHHHHh---------CCCCEEEEecCCcCc
Confidence 77641 1 22 2110 1124577776655432 146899999999987
Q ss_pred ccccCH-HHHHHHhhcCCcEEEEEeec---CCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCccccccccee
Q 010950 279 VRVADP-TFLGYFIDKGVSAGAKVVRK---AYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVC 354 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~~~~~~~kvv~k---~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~ 354 (497)
....+- .++..+...+..+++..... .+| ..++++. . .+|+ ++.+.+-+.... .++ . ...+ ..|.+
T Consensus 99 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~~g~--v~~~~e~~~~~~--~~~-~-~~~~-~~~~g 168 (234)
T 2y6p_A 99 VYEEDIKLIFRELEKGERVVTLARKDKEAYERP-EDVKVVL-D-REGY--ALYFSRSPIPYF--RKN-D-TFYP-LKHVG 168 (234)
T ss_dssp CCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCT-TSCEEEE-C-TTSB--EEEEESSCCSCC--SSC-C-SSCC-EEEEE
T ss_pred CCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCC-CceEEEE-c-CCCC--EeeeecCCCCcc--ccc-c-ccee-eEEEE
Confidence 543222 24555555553232222211 123 2334422 2 3553 555555331100 000 0 1122 24999
Q ss_pred eEEEehHHHHHHhh
Q 010950 355 LHMFTLDFLNQVAN 368 (497)
Q Consensus 355 ~~~f~l~fL~~~~~ 368 (497)
+++|+.+++.++..
T Consensus 169 iy~~~~~~l~~~~~ 182 (234)
T 2y6p_A 169 IYGFRKETLMEFGA 182 (234)
T ss_dssp EEEEEHHHHHHHHH
T ss_pred EEEcCHHHHHHHHh
Confidence 99999999987653
No 32
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=98.40 E-value=2.1e-06 Score=87.57 Aligned_cols=191 Identities=16% Similarity=0.148 Sum_probs=107.6
Q ss_pred EEEEecCCCccccC----CCCCCccccccCCCC-CChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHH
Q 010950 121 AVLLLSGGQGTRLG----SSDPKGCVNIGLPSG-KSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 195 (497)
Q Consensus 121 avvlLAGG~GTRLG----~~~PKg~~~i~l~sg-ksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~ 195 (497)
.+|+||||.||||+ ...||.++|+ .| +|++|+.++++..+ .++. ..+|.|.....+.
T Consensus 3 ~~VILAgG~GtRl~Pls~~~~pK~ll~l---~g~~pli~~~l~~l~~~--------------~~~~-~iivvt~~~~~~~ 64 (336)
T 2x65_A 3 KALILAGGSGERFWPLSTPETPKQFLKL---FGNKSLMRWTFERVLEE--------------MDPK-DVIVVTHKDYVER 64 (336)
T ss_dssp EEEEECCCBCGGGTTTSCTTCBGGGCCC---BTTBCHHHHHHHHHHTT--------------CCGG-GEEEEEEGGGHHH
T ss_pred EEEEECCCCCccCCCCcCCCCCceEEEC---CCCCcHHHHHHHHHhcc--------------CCCC-cEEEEcChHHHHH
Confidence 57899999999998 5679999888 66 99999999987531 0111 2366665544556
Q ss_pred HHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCC
Q 010950 196 TRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVD 275 (497)
Q Consensus 196 t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vD 275 (497)
+.+++.+.. ..+ +..|+ .|-|.|+....... .+ ..-+++.+.+.|
T Consensus 65 i~~~l~~~~-----~~~--ii~e~---------------------~~~gta~ai~~a~~-----~~--~~~~~~lvl~~D 109 (336)
T 2x65_A 65 TKKELPELP-----DEN--IIAEP---------------------MKKNTAPACFIGTK-----LA--DDDEPVLVLPAD 109 (336)
T ss_dssp HHHHCTTSC-----GGG--EEEES---------------------SCCCHHHHHHHHHT-----TS--CTTCEEEEEETT
T ss_pred HHHHhhccc-----cce--EEeCC---------------------CCCCcHHHHHHHHH-----hh--CCCCEEEEEcCC
Confidence 777776421 111 12211 13466665443221 11 234789999999
Q ss_pred cccccccC-----HHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecC--CCCeEEEEeccCChhhhhhccccCCcccc
Q 010950 276 NALVRVAD-----PTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGK--GGPLTVVEYSELDPSLASAINQETGRLRF 348 (497)
Q Consensus 276 N~L~~~~D-----p~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~--~g~~~vvEYsel~~~~~~~~~~~~g~~~f 348 (497)
.++....+ -.++.++.+.+..+++-+.+ +.|...-|.+..... ++...|..+.|-|........-..|. |
T Consensus 110 ~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p-~~~~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~--y 186 (336)
T 2x65_A 110 HRIPDTKKFWKTVKKALDALEKYDGLFTFGIVP-TRPETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKFVESGR--F 186 (336)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECC-CSCCSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHTC--E
T ss_pred ceeccHHHHHHHHHHHHHHHHhcCCeEEEEeec-ccCCCCceEEEECCccCCCccEEEEEEECCChHHHHHHHhcCC--e
Confidence 98632111 01223344546655555544 345444577654310 11135777777665321110001232 2
Q ss_pred cccceeeEEEehHHHHHHhh
Q 010950 349 CWSNVCLHMFTLDFLNQVAN 368 (497)
Q Consensus 349 ~~gNi~~~~f~l~fL~~~~~ 368 (497)
.-|+++++|+.+.+.+.+.
T Consensus 187 -~~n~Giy~~~~~~ll~~l~ 205 (336)
T 2x65_A 187 -LWNSGMFLWKAREFIEEVK 205 (336)
T ss_dssp -EEEEEEEEEEHHHHHHHHH
T ss_pred -EEEeeeEEEEHHHHHHHHH
Confidence 3499999999988854443
No 33
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=98.40 E-value=3.3e-06 Score=84.09 Aligned_cols=184 Identities=15% Similarity=0.137 Sum_probs=108.1
Q ss_pred CEEEEEecCCCccccCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHH
Q 010950 119 KLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDA 195 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~---~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~ 195 (497)
.+.+|+||||.||||+. +.||.++|+ .|++++++.++++.. .++. .++|.|+. ..+.
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~gi~-~i~vv~~~-~~~~ 67 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKEMLPL---VDKPLIQYVVNECIA---------------AGIT-EIVLVTHS-SKNS 67 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEECG-GGHH
T ss_pred ccEEEEECCcCcccCCccccCCCceeeEE---CCeEHHHHHHHHHHH---------------CCCC-EEEEEeCC-CHHH
Confidence 45789999999999984 669999999 799999999998753 1211 23555554 5788
Q ss_pred HHHHHhhcCC----------------------CCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhh
Q 010950 196 TRKYFEGHKY----------------------FGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALK 253 (497)
Q Consensus 196 t~~~~~~~~~----------------------FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~ 253 (497)
+.+++.+... +|. +|.+..|. .|-|.|+......
T Consensus 68 i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~---~i~~~~~~---------------------~~~Gt~~al~~a~ 123 (302)
T 2e3d_A 68 IENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV---TIMQVRQG---------------------LAKGLGHAVLCAH 123 (302)
T ss_dssp HHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTC---EEEEEECS---------------------SCCCHHHHHHHTH
T ss_pred HHHHHhcchhhhhhhhhccchhhhhhhhhccccCc---ceEEeeCC---------------------ccCCHHHHHHHHH
Confidence 8888865210 111 22222221 2557777554322
Q ss_pred hccHHHHHHHcCceEEEEEeCCccccc----cc---C-HHHHHHHhhcCCcEEEEEeecCCCCCccceEEEe-c--CCC-
Q 010950 254 SSKLLEDMATRGIKYIDCYGVDNALVR----VA---D-PTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRR-G--KGG- 321 (497)
Q Consensus 254 ~sg~l~~l~~~G~~yi~v~~vDN~L~~----~~---D-p~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~-~--~~g- 321 (497)
+.+ +-+++.|.+.|+++ . .. | -.++..+...++ +.+-+.+. .+...-|++... . .+|
T Consensus 124 -----~~~---~~~~~lv~~~D~~~-~~~~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~-~~~~~yg~v~~~~~~~~~g~ 192 (302)
T 2e3d_A 124 -----PVV---GDEPVAVILPDVIL-DEYESDLSQDNLAEMIRRFDETGH-SQIMVEPV-ADVTAYGVVDCKGVELAPGE 192 (302)
T ss_dssp -----HHH---CSSCEEEECTTEEE-CTTSSCTTTSTHHHHHHHHHHHCC-EEEEEEEC-SCGGGSEEEECTTCCCCTTC
T ss_pred -----HHc---CCCcEEEEcCCccc-cCccccchHHHHHHHHHHHHhcCC-cEEEEEEc-cCCCCccEEEecccccCCCC
Confidence 222 13689999999996 4 22 2 236666766666 44444443 333445766431 0 234
Q ss_pred CeEEEEeccCChhhhhhccccCCcccccccceeeEEEehHHHHHH
Q 010950 322 PLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQV 366 (497)
Q Consensus 322 ~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~ 366 (497)
-..|..+.|-|... ... . +..|+++++|+.++++.+
T Consensus 193 ~~~v~~~~ekp~~~-------~~~-~-~~~~~Giyi~~~~~l~~l 228 (302)
T 2e3d_A 193 SVPMVGVVEKPKAD-------VAP-S-NLAIVGRYVLSADIWPLL 228 (302)
T ss_dssp EEEECEEEESCCTT-------TCS-C-SEEEEEEEEECTTHHHHH
T ss_pred ceeEEEEEECCCCC-------ccc-c-ceEEEEEEEECHHHHHHH
Confidence 22455555544210 000 1 246899999999877543
No 34
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=98.39 E-value=2e-06 Score=85.47 Aligned_cols=185 Identities=13% Similarity=0.090 Sum_probs=99.3
Q ss_pred CCEEEEEecCCCccccCC---CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchH
Q 010950 118 GKLAVLLLSGGQGTRLGS---SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (497)
Q Consensus 118 gkvavvlLAGG~GTRLG~---~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (497)
..+.+|+||||.||||+. ..||.++|+ .|++++++.++++.. .++. .++|.|. +..+
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i---~gkpli~~~l~~l~~---------------~g~~-~i~vv~~-~~~~ 72 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPV---VDRPLIQYAVDEAVE---------------AGIE-QMIFVTG-RGKS 72 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEEC-TTCH
T ss_pred CccEEEEECCCCccccCccccCCCceeeeE---CCeEHHHHHHHHHHh---------------CCCC-EEEEEeC-CCHH
Confidence 356789999999999974 679999999 799999999998753 1211 2355554 4578
Q ss_pred HHHHHHhhcC-------------------C-CCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhh
Q 010950 195 ATRKYFEGHK-------------------Y-FGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKS 254 (497)
Q Consensus 195 ~t~~~~~~~~-------------------~-FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~ 254 (497)
.+.+++.+.. + +|. +|.+..|. .|-|.|+......
T Consensus 73 ~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~---~i~~~~~~---------------------~~~Gt~~al~~a~- 127 (297)
T 2ux8_A 73 ALEDHFDIAYELEATMAARGKSLDVLDGTRLKPG---NIAYVRQQ---------------------EPMGLGHAVWCAR- 127 (297)
T ss_dssp HHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTT---SEEEEECC---------------------SCCCHHHHHHTTH-
T ss_pred HHHHHHhhhhhhhhhhhhccchhhhhhhcccCCC---ceEEEeCC---------------------CCCChHHHHHHHH-
Confidence 8888876420 0 121 23332221 2457776655432
Q ss_pred ccHHHHHHHcCceEEEEEeCCccccc--ccC-HHHHHHHhhcCCcEEEEEeec--CCCCCccceEEEec-CCCCeEEEEe
Q 010950 255 SKLLEDMATRGIKYIDCYGVDNALVR--VAD-PTFLGYFIDKGVSAGAKVVRK--AYPQEKVGVFVRRG-KGGPLTVVEY 328 (497)
Q Consensus 255 sg~l~~l~~~G~~yi~v~~vDN~L~~--~~D-p~~lG~~~~~~~~~~~kvv~k--~~p~e~vGvi~~~~-~~g~~~vvEY 328 (497)
+.+ +-+++.|.+.|+++ . ..+ -.++..+.+.++ ..+.+.+. ..+ ...|++.... .+|...|..+
T Consensus 128 ----~~~---~~~~~lv~~~D~~~-~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~~~~-~~yg~v~~~~~~~~~~~v~~~ 197 (297)
T 2ux8_A 128 ----DIV---GDEPFAVLLPDDFM-FGQPGCLKQMVDAYNKVGG-NLICAEEVPDDQT-HRYGIITPGTQDGVLTEVKGL 197 (297)
T ss_dssp ----HHH---CSSCEEEECTTEEE-ESSSCHHHHHHHHHHHHCS-EEEEEC------------CCCCCCBCSSEEEC---
T ss_pred ----HHc---CCCcEEEEeCCeec-CCChHHHHHHHHHHHhcCC-CEEEEEecCcccC-CCCCeEEecccCCCceeEEEE
Confidence 222 23789999999995 4 222 236666666665 33333221 222 3346654210 1232245555
Q ss_pred ccCChhhhhhccccCCcccccccceeeEEEehHHHHHH
Q 010950 329 SELDPSLASAINQETGRLRFCWSNVCLHMFTLDFLNQV 366 (497)
Q Consensus 329 sel~~~~~~~~~~~~g~~~f~~gNi~~~~f~l~fL~~~ 366 (497)
.|-|... ... . +..|+++++|+.++++.+
T Consensus 198 ~ekp~~~-------~~~-~-~~~~~Giyi~~~~~l~~l 226 (297)
T 2ux8_A 198 VEKPAPG-------TAP-S-NLSVIGRYILQPEVMRIL 226 (297)
T ss_dssp --------------------CCCEEEEEEECTHHHHHH
T ss_pred EECCCCC-------CCC-c-cEEEEEEEEECHHHHHHH
Confidence 4433210 000 1 246999999999977544
No 35
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=98.33 E-value=1.1e-05 Score=78.64 Aligned_cols=186 Identities=16% Similarity=0.176 Sum_probs=105.8
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+ +|.++|+ .||+++++.++++.. .+. -.++|.|. ++.+.+
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~l~~~---~gkpli~~~l~~l~~---------------~~~-~~ivvv~~---~~~i~~ 56 (262)
T 1vic_A 2 SFTVIIPARFASSRLP---GKPLADI---KGKPMIQHVFEKALQ---------------SGA-SRVIIATD---NENVAD 56 (262)
T ss_dssp CCEEEEECCCCCSSST---TGGGCEE---TTEEHHHHHHHHHHH---------------TTC-SEEEEEES---CHHHHH
T ss_pred CcEEEEEcCCCCCCCC---CCccccC---CCeEHHHHHHHHHHh---------------CCC-ceEEEECC---cHHHHH
Confidence 4678999999999996 5999998 799999999998754 122 13466664 366788
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++ +|. .++.+.. ..+.|.|.+..+ ++.+...+.+++++.+.|+++
T Consensus 57 ~~~~---~~~-----~~~~~~~-------------------~~~~g~~~~~~~------~~~l~~~~~~~vlv~~~D~P~ 103 (262)
T 1vic_A 57 VAKS---FGA-----EVCMTSV-------------------NHNSGTERLAEV------VEKLAIPDNEIIVNIQGDEPL 103 (262)
T ss_dssp HHHH---TTC-----EEEECCC-------------------SSCCHHHHHHHH------HHHTTCCTTCEEEECCTTCTT
T ss_pred HHHh---cCC-----EEEECCc-------------------cccCChHHHHHH------HHHhccCCCCEEEEEeCCcCc
Confidence 8875 342 2333210 113455432222 222322356899999999997
Q ss_pred ccccCH-HHHHHHhhcCCcEEEEEeecCCCC----CccceEEEecCCCCeEEEEeccCC-hhhhhhc-------cccCCc
Q 010950 279 VRVADP-TFLGYFIDKGVSAGAKVVRKAYPQ----EKVGVFVRRGKGGPLTVVEYSELD-PSLASAI-------NQETGR 345 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~~~~~~~kvv~k~~p~----e~vGvi~~~~~~g~~~vvEYsel~-~~~~~~~-------~~~~g~ 345 (497)
....+- .++..+...++++++-+++...+. ...+.++.. .+|+ ++.+++-+ +..+... ...+.
T Consensus 104 i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~--v~~f~~~~~~~~r~~~~~~~~~~~~~~p- 179 (262)
T 1vic_A 104 IPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTD-KDGY--VLYFSRSVIPYDRDQFMNLQDVQKVQLS- 179 (262)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEEECCCHHHHTCTTSCEEEEC-TTSB--EEEEESSCSSCCHHHHTTCSCGGGCCCC-
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEEecCCHHHhcCCCceEEEEC-CCCC--EeeeecCCCCcCCccccccccccccccc-
Confidence 543332 355666666778766666554321 111222222 3564 44444321 0001100 00011
Q ss_pred ccccccceeeEEEehHHHHHHh
Q 010950 346 LRFCWSNVCLHMFTLDFLNQVA 367 (497)
Q Consensus 346 ~~f~~gNi~~~~f~l~fL~~~~ 367 (497)
..| ..|+++++|+.+++..+.
T Consensus 180 ~~~-~~~~giy~~~~~~l~~~~ 200 (262)
T 1vic_A 180 DAY-LRHIGIYAYRAGFIKQYV 200 (262)
T ss_dssp TTC-EEEEEEEEEEHHHHHHHH
T ss_pred cce-EEEEEEEEeeHHHHHHHH
Confidence 113 469999999999987654
No 36
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=98.23 E-value=7.3e-06 Score=77.92 Aligned_cols=134 Identities=13% Similarity=0.085 Sum_probs=77.8
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||| ||.++|+ .||+++++.++++.+. ..+. .++|.|. ++.+.+
T Consensus 4 ~~~aiIlA~G~g~R~~---~K~l~~i---~gkpll~~~l~~~~~~--------------~~~~-~ivvv~~---~~~i~~ 59 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP---LKNLRKM---NGISLLGHTINAAISS--------------KCFD-RIIVSTD---GGLIAE 59 (228)
T ss_dssp EEEEEEECCSSCSSST---TTTTCEE---TTEEHHHHHHHHHHHH--------------CCCS-EEEEEES---CHHHHH
T ss_pred ceEEEEecCCCCCCCC---Cccccee---CCcCHHHHHHHHHHhC--------------CCCC-EEEEECC---CHHHHH
Confidence 5788999999999999 9999999 7999999999987541 0111 3366663 466777
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++ +|. .++.... .....|.| ...++.. .++.+ ..+.+++.+++.|+++
T Consensus 60 ~~~~---~~~-----~~~~~~~------------------~~~~~~~g-~~~sv~~--~l~~~-~~~~d~vlv~~~D~P~ 109 (228)
T 1ezi_A 60 EAKN---FGV-----EVVLRPA------------------ELASDTAS-SISGVIH--ALETI-GSNSGTVTLLQPTSPL 109 (228)
T ss_dssp HHHH---TTC-----EEEECCC------------------------CH-HHHHHHH--HHHHH-TCCSEEEEECCTTCTT
T ss_pred HHHH---cCC-----EEEeCch------------------HHcCCCCC-hHHHHHH--HHHHh-CCCCCEEEEEcCCCCc
Confidence 8765 343 2232211 01112222 2222221 12223 2346899999999997
Q ss_pred ccccCH-HHHHHHhhcCCcEEEEEeecCC
Q 010950 279 VRVADP-TFLGYFIDKGVSAGAKVVRKAY 306 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~~~~~~~kvv~k~~ 306 (497)
....+- .++..+...++++.+-+++...
T Consensus 110 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 138 (228)
T 1ezi_A 110 RTGAHIREAFSLFDEKIKGSVVSACPMEH 138 (228)
T ss_dssp CCHHHHHHHHTTCCTTTCCCEEEEEECSS
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEEEecCC
Confidence 433222 1333333445666666665543
No 37
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=98.19 E-value=7.5e-06 Score=83.45 Aligned_cols=188 Identities=15% Similarity=0.142 Sum_probs=102.5
Q ss_pred EEEEEecCCCccccC----CCCCCccccccCCCC-CChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchH
Q 010950 120 LAVLLLSGGQGTRLG----SSDPKGCVNIGLPSG-KSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDD 194 (497)
Q Consensus 120 vavvlLAGG~GTRLG----~~~PKg~~~i~l~sg-ksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~ 194 (497)
+..|+||||.||||. ...||.++|+ .| +|++|+.++++... .++. ..+|.|.....+
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~ll~l---~G~~pli~~~l~~l~~~--------------~~~~-~iiVvt~~~~~~ 64 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKPFLPL---FEGKTLLEATLERLAPL--------------VPPE-RTLLAVRRDQEA 64 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGGGCBC---GGGCBHHHHHHHHHTTT--------------SCGG-GEEEEEEGGGHH
T ss_pred eEEEEEcCCCcccCCccCCCCCCceEEEc---CCCChHHHHHHHHHhCc--------------CCCC-CEEEEcChHHHH
Confidence 578999999999996 4679999888 67 99999999987431 0122 235555543233
Q ss_pred HHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeC
Q 010950 195 ATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGV 274 (497)
Q Consensus 195 ~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~v 274 (497)
.+.+++.+ ..+ +. + -.|.|.|........ +.. ..+-+++.+.+.
T Consensus 65 ~i~~~l~~--------~~~--i~---------------e------~~~~gta~ai~~a~~---l~~--~~~~~~~lvl~~ 108 (337)
T 2cu2_A 65 VARPYADG--------IRL--LL---------------E------PLGRDTAGAVLLGVA---EAL--KEGAERLLVLPA 108 (337)
T ss_dssp HHGGGCSS--------SEE--EE---------------E------SSCCHHHHHHHHHHH---HHH--HHTCSEEEEEES
T ss_pred HHHHHhcc--------Cce--Ee---------------c------CCCCCcHHHHHHHHH---Hhc--cCCCCEEEEEEC
Confidence 33333321 011 11 1 113455554433221 221 123578999999
Q ss_pred CcccccccCH-HHHH----HHhhcCCcEEEEEeecCCCCCccceEEEecC-CCCeEEEEeccCChhh-hhhccccCCccc
Q 010950 275 DNALVRVADP-TFLG----YFIDKGVSAGAKVVRKAYPQEKVGVFVRRGK-GGPLTVVEYSELDPSL-ASAINQETGRLR 347 (497)
Q Consensus 275 DN~L~~~~Dp-~~lG----~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~-~g~~~vvEYsel~~~~-~~~~~~~~g~~~ 347 (497)
|.++....+- ..+. ++. .+..+++-+.+. .|...-|.+..... ++...|..+.|-|... +...- ..|
T Consensus 109 D~~~~~~~~~~~~l~~~~~~~~-~~~~vt~~i~p~-~~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~~-~~g--- 182 (337)
T 2cu2_A 109 DHYVGDDEAYREALATMLEAAE-EGFVVALGLRPT-RPETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEYI-RKG--- 182 (337)
T ss_dssp SCEESCHHHHHHHHHHHHHHCC-TTCEEEEEECCS-SCCSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHHH-HTT---
T ss_pred CccCCCHHHHHHHHHHHHHHHH-cCCeEEEeeccC-CCCCCceEEEECCcccccCeEEEEEeCCChHHHHHHh-hcC---
Confidence 9986321110 0122 222 255555555544 44445577754310 0113577777766532 21111 123
Q ss_pred ccccceeeEEEehHHHHHHhh
Q 010950 348 FCWSNVCLHMFTLDFLNQVAN 368 (497)
Q Consensus 348 f~~gNi~~~~f~l~fL~~~~~ 368 (497)
| ..|.++++|+.+.+.+.+.
T Consensus 183 ~-~~n~Giy~f~~~~ll~~l~ 202 (337)
T 2cu2_A 183 Y-VWNGGVFAFAPATMAELFR 202 (337)
T ss_dssp C-EEEEEEEEECHHHHHHHHH
T ss_pred C-EEEEEEEEEeHHHHHHHHH
Confidence 2 4599999999988744443
No 38
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=98.15 E-value=5.9e-06 Score=80.51 Aligned_cols=41 Identities=32% Similarity=0.533 Sum_probs=36.5
Q ss_pred CEEEEEecCCCccccC---CCCCCccccccCCCCCChHHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILC 162 (497)
Q Consensus 119 kvavvlLAGG~GTRLG---~~~PKg~~~i~l~sgksllq~~~e~i~~ 162 (497)
++.+|+||||.||||+ .+.||.++|+ .|++++++.++++..
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i---~gkpli~~~l~~l~~ 68 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQV---NQKPLIEYQIEFLKE 68 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEE---TTEEHHHHHHHHHHH
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeE---CCEEHHHHHHHHHHH
Confidence 5788999999999998 5779999998 799999999998754
No 39
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=98.13 E-value=2.2e-05 Score=74.95 Aligned_cols=135 Identities=14% Similarity=0.168 Sum_probs=82.6
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||+ +|.+.|+ .||+++++.++++.+.. .+. .+++-| .++.+.+
T Consensus 3 ~~~aiIlA~G~s~R~~---~K~l~~i---~Gkpli~~~i~~~~~~~--------------~~~-~ivv~~---~~~~i~~ 58 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP---LKNIKRL---AGVPLIGWVLRAALDAG--------------VFQ-SVWVST---DHDEIEN 58 (229)
T ss_dssp CEEEEEECCSCCSSSS---CTTTSEE---TTEEHHHHHHHHHHHHT--------------CCS-EEEEEE---SCHHHHH
T ss_pred cEEEEEEcCCCCCCCC---CcccceE---CCEEHHHHHHHHHHhCC--------------CcC-EEEEEC---ChHHHHH
Confidence 6789999999999996 5999998 89999999999875411 111 235555 3577888
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCccc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNAL 278 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L 278 (497)
++++ +|. .++.++.-- ....+.|.+.+..++.. + .+.+++++.+.|++|
T Consensus 59 ~~~~---~g~-----~~~~~~~~~---------------~~~~~~~~~~v~~al~~------~--~~~d~vlv~~~D~Pl 107 (229)
T 1qwj_A 59 VAKQ---FGA-----QVHRRSSET---------------SKDSSTSLDAIVEFLNY------H--NEVDIVGNIQATSPC 107 (229)
T ss_dssp HHHH---TTC-----EEEECCGGG---------------SSTTCCHHHHHHHHHTT------C--TTCSEEEEECTTCTT
T ss_pred HHHH---cCC-----EEEeChhhh---------------cCCCCcHHHHHHHHHHh------c--CCCCEEEEecCCCCc
Confidence 8875 343 234432100 00011222334444322 1 256899999999997
Q ss_pred ccccCH-HHHHHHhhcCCcEEEEEeecCCCC
Q 010950 279 VRVADP-TFLGYFIDKGVSAGAKVVRKAYPQ 308 (497)
Q Consensus 279 ~~~~Dp-~~lG~~~~~~~~~~~kvv~k~~p~ 308 (497)
....+- .++..+...++++.+.+.+..+|.
T Consensus 108 i~~~~i~~l~~~~~~~~~~~~~~~~~~~~p~ 138 (229)
T 1qwj_A 108 LHPTDLQKVAEMIREEGYDSVFSVVRRHQFR 138 (229)
T ss_dssp CCHHHHHHHHHHHHSSCCSEEEEEEEECCCE
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeeccChh
Confidence 543332 245556666777665555444443
No 40
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=98.11 E-value=2.3e-05 Score=75.74 Aligned_cols=128 Identities=15% Similarity=0.214 Sum_probs=72.8
Q ss_pred CEEEEEecCCCccccCC-CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHH
Q 010950 119 KLAVLLLSGGQGTRLGS-SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~-~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (497)
++.+|+||||.|||||. +.||.++|+ .||+++++.++++.+ .+.--.++|.|+....+.+.
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~l~~l---~Gkpll~~~l~~~~~---------------~~~~~~ivvv~~~~~~~~~~ 64 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQFLPL---NGKPIIVHTVEKFIL---------------NTRFDKILISSPKEWMNHAE 64 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGGGSEE---TTEEHHHHHHHHHHT---------------CTTCSEEEEEECGGGHHHHH
T ss_pred ccEEEEECCccccccCCCCCCCeEEEE---CCeeHHHHHHHHHHc---------------CCCCCEEEEEeCHHHHHHHH
Confidence 57899999999999998 779999999 899999999998743 11111346666655444566
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHH----cCceEEEEEe
Q 010950 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT----RGIKYIDCYG 273 (497)
Q Consensus 198 ~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~----~G~~yi~v~~ 273 (497)
+.++++. .+ ..+.+.. +. .+ + .++++.+| +.+.. .+.++++|.+
T Consensus 65 ~~~~~~~---~~-~~~~~~~-~~------~~-------------~--~~sv~~al------~~l~~~~~~~~~~~vlv~~ 112 (246)
T 3f1c_A 65 DNIKKYI---SD-DRIVVIE-GG------ED-------------R--NETIMNGI------RFVEKTYGLTDDDIIVTHD 112 (246)
T ss_dssp HHHHHHC---CC-TTEEEEE-CC------SS-------------H--HHHHHHHH------HHHHHHTCCCTTCEEEEEE
T ss_pred HHHHHhC---CC-CCEEEEC-CC------Cc-------------h--HHHHHHHH------HHHhhhhcCCCCCEEEEec
Confidence 7776632 11 1233221 10 00 0 12444444 33433 2468999999
Q ss_pred CCcccccccCH-HHHHHHhhcCCc
Q 010950 274 VDNALVRVADP-TFLGYFIDKGVS 296 (497)
Q Consensus 274 vDN~L~~~~Dp-~~lG~~~~~~~~ 296 (497)
.|.+|+...+- .++..+...++.
T Consensus 113 ~d~Pli~~~~i~~li~~~~~~~a~ 136 (246)
T 3f1c_A 113 AVRPFLTHRIIEENIDAALETGAV 136 (246)
T ss_dssp TTCTTCCHHHHHHHHHHHHHTSEE
T ss_pred CcccCCCHHHHHHHHHHHHhcCCE
Confidence 99997544333 245555555543
No 41
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=98.09 E-value=2e-05 Score=74.14 Aligned_cols=41 Identities=22% Similarity=0.432 Sum_probs=36.7
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILC 162 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~ 162 (497)
++.+|+||||.|||||...||.++|+ .|++++++.++++.+
T Consensus 2 ~~~~vIlA~G~g~R~~~~~~K~l~~~---~g~pli~~~l~~l~~ 42 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLRAGRPKAFVTL---GGTPLLEHALSGLRA 42 (223)
T ss_dssp CEEEEEECCCCCGGGTSSSCGGGSEE---TTEEHHHHHHHHHHH
T ss_pred ceEEEEECCccCcccCCCCCCeeeEE---CCeEHHHHHHHHHhc
Confidence 47789999999999997789999998 799999999998754
No 42
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=98.08 E-value=2.8e-05 Score=75.10 Aligned_cols=170 Identities=18% Similarity=0.264 Sum_probs=98.8
Q ss_pred CCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHH
Q 010950 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (497)
Q Consensus 118 gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (497)
|++++|+||||.|||||.+.||.++++ .||+++++.++.+.+. ..+ -.++|.|+....+.+.
T Consensus 6 ~~~~aIIlAaG~g~Rmg~~~~K~l~~l---~Gkpll~~~l~~~~~~--------------~~~-~~ivVv~~~~~~~~~~ 67 (231)
T 3q80_A 6 GEVVAIVPAAGSGERLAVGVPKAFYQL---DGQTLIERAVDGLLDS--------------GVV-DTVVVAVPADRTDEAR 67 (231)
T ss_dssp CCEEEEEECCCCCTTTCSSSCGGGCEE---TTEEHHHHHHHHHHHT--------------SCC-CEEEEEECGGGHHHHH
T ss_pred CceEEEEECCCCCccCCCCCCceEEEE---CCeEHHHHHHHHHHhC--------------CCC-CeEEEECChHHHHHHH
Confidence 468999999999999999899999998 8999999999987531 011 1346666655546666
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHH-cCceEEEEEeCCc
Q 010950 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT-RGIKYIDCYGVDN 276 (497)
Q Consensus 198 ~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~-~G~~yi~v~~vDN 276 (497)
+++.. .+.+...+. + ...+++.+|.. +.. .+.++++|+..|-
T Consensus 68 ~~~~~---------~v~~v~gg~-------~---------------r~~sv~~gl~~------~~~~~~~d~Vlv~~~d~ 110 (231)
T 3q80_A 68 QILGH---------RAMIVAGGS-------N---------------RTDTVNLALTV------LSGTAEPEFVLVHDAAR 110 (231)
T ss_dssp HHHGG---------GCEEEECCS-------S---------------HHHHHHHHHGG------GC---CCSEEEECCTTC
T ss_pred HHhcC---------CeEEEcCCC-------c---------------hHHHHHHHHHH------hhhcCCCCEEEEEcCCc
Confidence 66543 122221110 0 01345555432 111 1357999999999
Q ss_pred ccccccCHHHHHHHhh---cCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccce
Q 010950 277 ALVRVADPTFLGYFID---KGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNV 353 (497)
Q Consensus 277 ~L~~~~Dp~~lG~~~~---~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi 353 (497)
||.. |..|--++. .+.+.++-+++-.++ ++ ..+.+|. |.+.- + +..++..|+
T Consensus 111 Pli~---~~~i~~li~~~~~~~~~~i~~~p~~dt---~~---~~~~~g~--v~~~~--~------------r~~l~~~qT 165 (231)
T 3q80_A 111 ALTP---PALVARVVEALRDGYAAVVPVLPLSDT---IK---AVDANGV--VLGTP--E------------RAGLRAVQT 165 (231)
T ss_dssp TTCC---HHHHHHHHHHHHTTCSEEEEEECCSSC---EE---EECTTSB--EEECC--C------------GGGEEEECS
T ss_pred CCCC---HHHHHHHHHHHhhcCCeEEEEEeccCC---EE---EEcCCCc--EEEec--c------------hhheEEEcC
Confidence 9753 444433222 234555555544333 22 1222342 32221 1 113345676
Q ss_pred eeEEEehHHHHHHhh
Q 010950 354 CLHMFTLDFLNQVAN 368 (497)
Q Consensus 354 ~~~~f~l~fL~~~~~ 368 (497)
-..|+.+.|.+..+
T Consensus 166 -Pq~F~~~~L~~a~~ 179 (231)
T 3q80_A 166 -PQGFTTDLLLRSYQ 179 (231)
T ss_dssp -CEEEEHHHHHHHHH
T ss_pred -CcEEEHHHHHHHHH
Confidence 47999999988765
No 43
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=98.06 E-value=3e-05 Score=71.43 Aligned_cols=104 Identities=19% Similarity=0.151 Sum_probs=67.9
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||| .||.++|+ .|++++++.++++.. .++. +++|.|+. .++.+.+
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pli~~~l~~l~~---------------~~~~-~i~vv~~~-~~~~~~~ 62 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG--TPKQLLPL---GDTTLLGATLAMARR---------------CPFD-QLIVTLGG-AADEVLE 62 (199)
T ss_dssp CEEEEEEESSCCTTTT--SCGGGCEE---TTEEHHHHHHHHHHT---------------SSCS-EEEEEECT-THHHHHH
T ss_pred ceEEEEECCCCCCCCC--CCEEeCEe---CccCHHHHHHHHHHh---------------CCCC-cEEEEeCC-CHHHHHH
Confidence 5789999999999998 69999998 799999999988743 1211 34565543 4466777
Q ss_pred HHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCC-CchhhHhhhhccHHHHHHHcCceEEEEEeCCcc
Q 010950 199 YFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDG-NGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 277 (497)
Q Consensus 199 ~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~G-hGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~ 277 (497)
++++ +|+ .++.+. + .+.| .++++.++... ..+.+++++...|.+
T Consensus 63 ~~~~---~~~-----~~~~~~-------~-------------~~~g~~~~i~~al~~~-------~~~~~~vlv~~~D~P 107 (199)
T 2waw_A 63 KVEL---DGL-----DIVLVD-------D-------------AGLGCSSSLKSALTWV-------DPTAEGIVLMLGDQP 107 (199)
T ss_dssp HSCC---TTS-----EEEECC-------C-------------CCTTCCCHHHHHHHTS-------CTTCSEEEEEETTCT
T ss_pred Hhcc---CCC-----EEEECC-------C-------------cccCHHHHHHHHHHhh-------hccCCeEEEEeCCcc
Confidence 6654 232 222211 0 1225 34556555331 125789999999999
Q ss_pred cc
Q 010950 278 LV 279 (497)
Q Consensus 278 L~ 279 (497)
+.
T Consensus 108 ~~ 109 (199)
T 2waw_A 108 GI 109 (199)
T ss_dssp TC
T ss_pred cC
Confidence 64
No 44
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=97.97 E-value=0.00012 Score=75.43 Aligned_cols=167 Identities=19% Similarity=0.191 Sum_probs=100.6
Q ss_pred EEEEecCCCccccC---CCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHH
Q 010950 121 AVLLLSGGQGTRLG---SSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATR 197 (497)
Q Consensus 121 avvlLAGG~GTRLG---~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~ 197 (497)
.+|+||||.||||+ ...||.++|+ .||+++++.++++.+ .++. .++|.|+.. +.
T Consensus 2 ~aiIlA~G~g~R~~plt~~~~K~ll~i---~g~pli~~~l~~l~~---------------~~~~-~i~vv~~~~----i~ 58 (401)
T 2ggo_A 2 KAFILAAGSGERLEPITHTRPKAFVPI---LSKPLIEYQIEYLRK---------------CGIR-DITVIVSSK----NK 58 (401)
T ss_dssp EEEEECCCCCGGGTTGGGTSCGGGCEE---TTEEHHHHHHHHHHH---------------TTCC-EEEEEECGG----GH
T ss_pred eEEEEcCcCccccCcccCCCCcceeeE---CCEeHHHHHHHHHHH---------------CCCC-EEEEEeCHH----HH
Confidence 47899999999997 4679999999 899999999998754 1111 336666544 67
Q ss_pred HHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHcCceEEEEEeCCcc
Q 010950 198 KYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATRGIKYIDCYGVDNA 277 (497)
Q Consensus 198 ~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~ 277 (497)
+++++.. ..+.+..+.. .|.|.++.+....+ -+++++...|.+
T Consensus 59 ~~~~~~~------~~i~~~~~~~--------------------~~~g~~~~l~~~~~-----------~~~~lv~~~D~~ 101 (401)
T 2ggo_A 59 EYFEKKL------KEISIVTQKD--------------------DIKGTGAAILSAKF-----------NDEALIIYGDLF 101 (401)
T ss_dssp HHHHHHC------TTCEEEECCT--------------------TCCBSTTTGGGCCC-----------SSEEEEEETTEE
T ss_pred HHhhccC------CcEEEEeCCC--------------------CCCChHHHHHHhcc-----------CCCEEEEeCccc
Confidence 7776531 0233333211 13455544443221 468899999998
Q ss_pred cccccCHHHHHHHhhcCCcEEEEEeecCCCCCccceEEEecCCCCeEEEEeccCChhhhhhccccCCcccccccceeeEE
Q 010950 278 LVRVADPTFLGYFIDKGVSAGAKVVRKAYPQEKVGVFVRRGKGGPLTVVEYSELDPSLASAINQETGRLRFCWSNVCLHM 357 (497)
Q Consensus 278 L~~~~Dp~~lG~~~~~~~~~~~kvv~k~~p~e~vGvi~~~~~~g~~~vvEYsel~~~~~~~~~~~~g~~~f~~gNi~~~~ 357 (497)
+. +|..+-.+++ +.+.++-+.+..++. +-|++... .+| .+.++.+-+.. + .....|+++++
T Consensus 102 ~~---~~~~~~~l~~-~~~~~i~~~~~~~~~-~~~~v~~~-~~g--~v~~~~ek~~~------~-----~~~~~~~Giy~ 162 (401)
T 2ggo_A 102 FS---NEKEICNIIT-LKENAIIGVKVSNPK-DYGVLVLD-NQN--NLSKIIEKPEI------P-----PSNLINAGIYK 162 (401)
T ss_dssp ES---CSHHHHHHTT-CSSEEEEEEECSCCS-SSCEEEEC-TTS--SEEEEECSCSS------C-----SCSEEEEEEEE
T ss_pred cc---cHHHHHHHHH-hcCCEEEEEEcCCCc-ceeEEEEC-CCC--eEEEEEECCCC------C-----CCcEEEEEEEE
Confidence 53 2444454444 455555555544443 34666553 245 35566553311 0 01245888899
Q ss_pred EehHHHHHH
Q 010950 358 FTLDFLNQV 366 (497)
Q Consensus 358 f~l~fL~~~ 366 (497)
|+.++++.+
T Consensus 163 ~~~~~~~~l 171 (401)
T 2ggo_A 163 LNSDIFTYL 171 (401)
T ss_dssp EETHHHHHH
T ss_pred EcHHHHHHh
Confidence 999988654
No 45
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=97.97 E-value=5.1e-05 Score=71.91 Aligned_cols=65 Identities=17% Similarity=0.243 Sum_probs=39.8
Q ss_pred EEEEEecCCCccccCC-CCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 120 LAVLLLSGGQGTRLGS-SDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 120 vavvlLAGG~GTRLG~-~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
+.+|+||||.|||||. +.||.++|+ .|++++++.++++.+. .++. .++|.|+....+.+.+
T Consensus 3 ~~~iIlA~G~g~R~~~~~~~K~l~~i---~g~pli~~~l~~l~~~--------------~~~~-~i~vv~~~~~~~~~~~ 64 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGISNLPKQFLEL---GDRPILIHTIEKFVLE--------------PSIE-KIVVGVHGDWVSHAED 64 (236)
T ss_dssp EEEEEEEC-----------CGGGSEE---TTEEHHHHHHHHHHTC--------------TTCC-CEEEEECGGGHHHHHH
T ss_pred eEEEEeCCccccccCCCCCCCeeeee---CCccHHHHHHHHHHcC--------------CCCC-eEEEEeCHHHHHHHHH
Confidence 5789999999999996 669999998 7999999999887431 0111 3366666554477888
Q ss_pred HHhh
Q 010950 199 YFEG 202 (497)
Q Consensus 199 ~~~~ 202 (497)
++++
T Consensus 65 ~~~~ 68 (236)
T 2vsh_A 65 LVDK 68 (236)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8865
No 46
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=97.94 E-value=3.1e-05 Score=71.69 Aligned_cols=128 Identities=20% Similarity=0.297 Sum_probs=72.5
Q ss_pred EEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHHHH
Q 010950 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRKYF 200 (497)
Q Consensus 121 avvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~~~ 200 (497)
.+|+||||.|||||. .||.+.|+ .|++++++.++++.+ .++ -.++|.|+.. ++.+.+++
T Consensus 2 ~aiIlA~G~s~R~~~-~~K~l~~~---~g~pli~~~l~~l~~---------------~~~-~~v~vv~~~~-~~~i~~~~ 60 (196)
T 3rsb_A 2 DALIMAGGKGTRMGG-VEKPLIKL---CGRCLIDYVVSPLLK---------------SKV-NNIFIATSPN-TPKTKEYI 60 (196)
T ss_dssp EEEEEC----CGGGG-SCGGGCEE---TTEEHHHHHHHHHHS---------------SSC-CCEEEECCTT-CHHHHHHH
T ss_pred EEEEECCCCCCcCCC-CCccEEEE---CCEEHHHHHHHHHHH---------------CCC-CEEEEEeCCC-hHHHHHHH
Confidence 478999999999987 79999998 899999999998753 121 1346666655 68889998
Q ss_pred hhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCc-hhhHhhhhccHHHHHHHcCceEEEEEeCCcccc
Q 010950 201 EGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNG-GVYSALKSSKLLEDMATRGIKYIDCYGVDNALV 279 (497)
Q Consensus 201 ~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhG-gi~~aL~~sg~l~~l~~~G~~yi~v~~vDN~L~ 279 (497)
.+. ++.. ..+.++. . . ..|.+ +++.++.. + .+++.+.+.|.++.
T Consensus 61 ~~~--~~~~-~~~~~~~-~-------~--------------~~g~~~si~~al~~------~----~~~vlv~~~D~P~i 105 (196)
T 3rsb_A 61 NSA--YKDY-KNIVVID-T-------S--------------GKGYIEDLNECIGY------F----SEPFLVVSSDLINL 105 (196)
T ss_dssp HHH--TTTT-TEEEE------------------------------CCCCCTTTTT------C----SSCEEEEETTEESC
T ss_pred Hhh--ccCC-CCEEEEE-C-------C--------------CCCcHHHHHHHHHh------C----CCCEEEEeCCcccC
Confidence 873 2221 1333221 1 0 11322 34444332 1 57899999999975
Q ss_pred cccCHH-HHHHHhh-----cCCcEEEEEeec
Q 010950 280 RVADPT-FLGYFID-----KGVSAGAKVVRK 304 (497)
Q Consensus 280 ~~~Dp~-~lG~~~~-----~~~~~~~kvv~k 304 (497)
...+-. ++..+.. .+.+..+-+++.
T Consensus 106 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~ 136 (196)
T 3rsb_A 106 KSKIINSIVDYFYCIKAKTPDVEALAVMIPK 136 (196)
T ss_dssp CHHHHHHHHHHHHHHHTTCC--CEEEEEEET
T ss_pred CHHHHHHHHHHHHhhhcccCCCceEEEEEEc
Confidence 443332 4444444 345555555544
No 47
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=97.88 E-value=2.6e-05 Score=74.20 Aligned_cols=41 Identities=29% Similarity=0.539 Sum_probs=36.8
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILC 162 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~ 162 (497)
.+.+|+||||.|||||.+.||.+.|+ .||+++++.++++.+
T Consensus 13 ~~~aiILAaG~s~Rm~~~~~K~l~~i---~Gkpli~~~i~~l~~ 53 (234)
T 1vpa_A 13 MNVAILLAAGKGERMSENVPKQFLEI---EGRMLFEYPLSTFLK 53 (234)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGCEE---TTEETTHHHHHHHHH
T ss_pred cCeEEEEcCcchhhcCCCCCceEEEE---CCeEHHHHHHHHHHc
Confidence 56889999999999997779999998 899999999998753
No 48
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=97.85 E-value=7.3e-05 Score=68.77 Aligned_cols=62 Identities=15% Similarity=0.223 Sum_probs=46.1
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHHHHHHHHhhhcCCCCCCCcceeEEEecCCCchHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILCVQRLAAQVTSEGGGSGSAAIHWYIMTSPFTDDATRK 198 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~l~~l~~~~~~~~~~~~~~~ipl~IMTS~~t~~~t~~ 198 (497)
++.+|+||||.||||| .||.++|+ .|++++++.++++.. .++. .++|.|+. ..+.+.+
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~l~~~---~g~pll~~~l~~l~~---------------~~~~-~i~vv~~~-~~~~~~~ 62 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG--TPKQLLPY---RDTTVLGATLDVARQ---------------AGFD-QLILTLGG-AASAVRA 62 (197)
T ss_dssp EEEEEEEECCCCTTTS--SCGGGSEE---TTEEHHHHHHHHHHH---------------TTCS-EEEEEECT-THHHHHH
T ss_pred ceEEEEECCCCcccCC--CCeEcCee---CCccHHHHHHHHHHh---------------cCCC-cEEEEeCC-CHHHHHH
Confidence 5789999999999997 69999998 799999999988753 1211 33565544 3566766
Q ss_pred HHhh
Q 010950 199 YFEG 202 (497)
Q Consensus 199 ~~~~ 202 (497)
++.+
T Consensus 63 ~~~~ 66 (197)
T 2wee_A 63 AMAL 66 (197)
T ss_dssp HSCC
T ss_pred Hhcc
Confidence 6653
No 49
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=97.83 E-value=2.7e-05 Score=72.74 Aligned_cols=38 Identities=21% Similarity=0.378 Sum_probs=33.8
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~ 161 (497)
++.+|+||||.|||||. ||.++++ .|++++++.++++.
T Consensus 2 ~~~~iIlAgG~g~Rmg~--~K~l~~i---~g~pll~~~l~~l~ 39 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFGG--DKLLAKI---DNTPIIMRTIRIYG 39 (197)
T ss_dssp CEEEEEECSCCTTCCCS--SGGGSBS---SSSBHHHHHHHHTT
T ss_pred ceEEEEECCcCcccCCC--CeeeCEe---CceEHHHHHHHHHH
Confidence 46789999999999985 9999988 89999999988763
No 50
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=97.76 E-value=0.00022 Score=67.59 Aligned_cols=36 Identities=36% Similarity=0.512 Sum_probs=32.8
Q ss_pred EEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHH
Q 010950 121 AVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (497)
Q Consensus 121 avvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~ 161 (497)
.+|+||||.||||| .||.++++ .|++++++.++++.
T Consensus 2 ~aiILAgG~s~Rmg--~~K~ll~~---~G~pli~~~~~~l~ 37 (208)
T 3ngw_A 2 KVAVLVGGVGRRIG--MEKTEVML---CGKKLIEWVLEKYS 37 (208)
T ss_dssp EEEEECCCCCTTTT--SCGGGCEE---TTEEHHHHHHHHHT
T ss_pred EEEEECCCchhhCC--CCCcccEE---CCeeHHHHHHHHhc
Confidence 57999999999999 79999998 89999999999873
No 51
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=97.56 E-value=8.4e-05 Score=70.29 Aligned_cols=41 Identities=29% Similarity=0.450 Sum_probs=30.6
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERILC 162 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~ 162 (497)
++.+|+||||.|||||.+.||.++|+ .|++++++.++++.+
T Consensus 4 ~~~aiIlAaG~g~R~~~~~~K~l~~i---~g~pli~~~l~~l~~ 44 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKMSMPKQYIPL---LGQPIALYSFFTFSR 44 (228)
T ss_dssp CEEEEEECCCCC-------CGGGSEE---TTEEHHHHHHHHHHH
T ss_pred ceEEEEECCccccccCCCCCccEeEE---CCEEHHHHHHHHHHc
Confidence 57899999999999997789999998 899999999988753
No 52
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=97.54 E-value=6.1e-05 Score=71.30 Aligned_cols=41 Identities=27% Similarity=0.410 Sum_probs=27.8
Q ss_pred CCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHH
Q 010950 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (497)
Q Consensus 118 gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~ 161 (497)
.++.+|+||||.|||||.+.||.++++ .|++++++.++++.
T Consensus 5 ~~~~aiIlA~G~g~R~~~~~~K~l~~~---~gkpli~~~l~~l~ 45 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGADKPKQYVEI---GSKTVLEHVLGIFE 45 (231)
T ss_dssp CCEEEEEECC----------CCSCCEE---TTEEHHHHHHHHHH
T ss_pred CceEEEEEcccccccCCCCCCceEeEE---CCeEHHHHHHHHHH
Confidence 468899999999999997779999998 79999999999875
No 53
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=97.38 E-value=0.0001 Score=70.32 Aligned_cols=40 Identities=18% Similarity=0.439 Sum_probs=36.4
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~ 161 (497)
++.+|+||||.|||||.+.||.++|+ .|++++++.++++.
T Consensus 7 ~~~~iIlA~G~g~R~~~~~~K~l~~i---~g~pll~~~i~~l~ 46 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQTECPKQYLSI---GNQTILEHSVHALL 46 (236)
T ss_dssp CEEEEEEECCCCGGGCCSSCGGGSEE---TTEEHHHHHHHHHH
T ss_pred ceeEEEECCcCccccCCCCCcceeeE---CCEEHHHHHHHHHH
Confidence 57899999999999997779999998 79999999999874
No 54
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=97.29 E-value=0.00013 Score=69.99 Aligned_cols=38 Identities=29% Similarity=0.621 Sum_probs=27.6
Q ss_pred CCEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHH
Q 010950 118 GKLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAER 159 (497)
Q Consensus 118 gkvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~ 159 (497)
-++++|+||||.|||||.+ ||.++++ .|++++++.+++
T Consensus 24 M~~~aiILAgG~s~Rm~~~-~K~l~~i---~gkpli~~~l~~ 61 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLGRG-PKAFLQV---GGRTLLEWTLAA 61 (236)
T ss_dssp CCCEEEEECCC-------C-CGGGCBC---SSSBHHHHHHHH
T ss_pred CceEEEEEcCCCCccCCCC-CCeEEEE---CCEEHHHHHHHh
Confidence 3678999999999999976 9999988 799999998887
No 55
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=97.20 E-value=0.00023 Score=66.70 Aligned_cols=39 Identities=31% Similarity=0.656 Sum_probs=35.2
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~ 161 (497)
++.+|+||||.||||| ..||.++|+ .|++++++.++++.
T Consensus 6 ~~~~iILAgG~s~Rmg-~~~K~ll~i---~G~pli~~~l~~l~ 44 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG-GVDKGLLEL---NGKPLWQHVADALM 44 (201)
T ss_dssp SEEEEEECCCCCSSSC-SSCGGGSEE---TTEEHHHHHHHHHH
T ss_pred cceEEEEcCCCCCcCC-CCCCceeeE---CceeHHHHHHHHHH
Confidence 5789999999999998 469999998 79999999999875
No 56
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=97.15 E-value=0.00044 Score=65.68 Aligned_cols=39 Identities=28% Similarity=0.491 Sum_probs=28.9
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~ 161 (497)
++.+|+||||.|||||.. ||.++|+ .|++++++.++++.
T Consensus 18 ~~~~iIlA~G~g~R~~~~-~K~l~~i---~g~pli~~~l~~l~ 56 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-PKPLVRV---GGCEIILRTMKLLS 56 (232)
T ss_dssp CEEEEEEECC------CC-CGGGCEE---TTEEHHHHHHHHHG
T ss_pred cceEEEECCcCcCcCCCC-CcEEeEE---CCEEHHHHHHHHHH
Confidence 578999999999999754 9999998 79999999998774
No 57
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=96.84 E-value=0.00018 Score=67.29 Aligned_cols=38 Identities=26% Similarity=0.383 Sum_probs=34.2
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~ 161 (497)
++.+|+||||.||||| .||.++|+ .|++++++.++++.
T Consensus 14 ~~~~iILA~G~g~Rmg--~~K~ll~i---~g~pll~~~l~~l~ 51 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG--EDKLLYEI---KGKKVIERVYETAK 51 (201)
T ss_dssp CCEEEEEEESSCCCCS--TTHHHHHH---HHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCccCC--CCcccceE---CceEHHHHHHHHHH
Confidence 5688999999999998 69999998 79999999998874
No 58
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=96.83 E-value=0.00079 Score=69.48 Aligned_cols=40 Identities=15% Similarity=0.419 Sum_probs=36.3
Q ss_pred CEEEEEecCCCccccCCCCCCccccccCCCCCChHHHHHHHHH
Q 010950 119 KLAVLLLSGGQGTRLGSSDPKGCVNIGLPSGKSLFQLQAERIL 161 (497)
Q Consensus 119 kvavvlLAGG~GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~ 161 (497)
++++|+||||.|||||.+.||.+.++ .||+++++.++++.
T Consensus 3 ki~aIILAaG~ssRmg~~~pK~ll~l---~GkPLi~~~l~~l~ 42 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNTKVKKQFLRL---GNDPLWLYATKNLS 42 (371)
T ss_dssp CEEEEEECCSCCTTTCSSSCGGGCEE---BTEEHHHHHHHHHH
T ss_pred ccEEEEECCCCCccCCCCCCcceEEE---CCeEHHHHHHHHHH
Confidence 57899999999999997789999998 79999999998874
No 59
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=95.98 E-value=0.004 Score=59.22 Aligned_cols=40 Identities=23% Similarity=0.503 Sum_probs=32.9
Q ss_pred CEEEEEecCCC---ccccCCCCCCccccccCCCCCChHHHHHHHHHH
Q 010950 119 KLAVLLLSGGQ---GTRLGSSDPKGCVNIGLPSGKSLFQLQAERILC 162 (497)
Q Consensus 119 kvavvlLAGG~---GTRLG~~~PKg~~~i~l~sgksllq~~~e~i~~ 162 (497)
++.+|+||||. |+||| ..||.++|+ .|++++++.++++..
T Consensus 2 ~~~~vIlAaG~tRl~~r~~-~~~K~l~~i---~g~pll~~~l~~l~~ 44 (232)
T 2dpw_A 2 RPSAIVLAGGKEAWAERFG-VGSKALVPY---RGRPMVEWVLEALYA 44 (232)
T ss_dssp CCEEEEECCCBCSGGGTTT-CSBGGGSEE---TTEETHHHHHHHHHH
T ss_pred ceeEEEECCCCCccccccC-CCCceeeEE---CCEEHHHHHHHHHHh
Confidence 46789999999 66665 369999998 799999999998753
No 60
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=47.14 E-value=32 Score=28.16 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=36.0
Q ss_pred chHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHHc
Q 010950 192 TDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMATR 264 (497)
Q Consensus 192 t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~~ 264 (497)
.....++.+.+. .| +.++|.+-.+|+.+ |..+...+|+++|-|.++++.
T Consensus 54 ~~~~~~~~l~~~--~g----------~~tvP~vfi~g~~i------------gG~d~l~~l~~~G~L~~~l~~ 102 (114)
T 3h8q_A 54 DGARVQEVLSEI--TN----------QKTVPNIFVNKVHV------------GGCDQTFQAYQSGLLQKLLQE 102 (114)
T ss_dssp THHHHHHHHHHH--HS----------CCSSCEEEETTEEE------------ESHHHHHHHHHHTHHHHHHHS
T ss_pred ChHHHHHHHHHH--hC----------CCccCEEEECCEEE------------eCHHHHHHHHHCCCHHHHhcC
Confidence 445666766542 23 35788887788754 778889999999999999884
No 61
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=34.09 E-value=43 Score=28.40 Aligned_cols=63 Identities=14% Similarity=0.136 Sum_probs=43.8
Q ss_pred CchHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHH-cCceEE
Q 010950 191 FTDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT-RGIKYI 269 (497)
Q Consensus 191 ~t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~-~G~~yi 269 (497)
...+..++++++. .| +.++|.+-.+|+.+ |..+-..+|.++|-|+.|++ .|-..+
T Consensus 53 ~d~~~~~~~l~~~--~G----------~~tVP~IfI~G~~I------------GG~ddl~~l~~~G~L~~lL~~~g~~~~ 108 (127)
T 3l4n_A 53 GHGEELQEYIKLV--TG----------RGTVPNLLVNGVSR------------GGNEEIKKLHTQGKLLESLQVWSDGKF 108 (127)
T ss_dssp TTHHHHHHHHHHH--HS----------CCSSCEEEETTEEC------------CCHHHHHHHHHTTCHHHHHHHTCTTSC
T ss_pred CCHHHHHHHHHHH--cC----------CCCcceEEECCEEE------------cCHHHHHHHHHCCCHHHHHHHhcCCcE
Confidence 3446788888762 23 56788887788744 77888999999999988765 477767
Q ss_pred EEEeCCcc
Q 010950 270 DCYGVDNA 277 (497)
Q Consensus 270 ~v~~vDN~ 277 (497)
.|...+-+
T Consensus 109 ~~~~~~~~ 116 (127)
T 3l4n_A 109 SVEQREKP 116 (127)
T ss_dssp EEEEC---
T ss_pred EEEEccCC
Confidence 77665543
No 62
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=32.53 E-value=54 Score=26.58 Aligned_cols=48 Identities=15% Similarity=0.168 Sum_probs=34.9
Q ss_pred chHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHH
Q 010950 192 TDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT 263 (497)
Q Consensus 192 t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~ 263 (497)
.+...++.|++. .| +.++|.+-.+|+.+ |..+....|+++|-|+.|++
T Consensus 57 ~~~~~~~~l~~~--~g----------~~tvP~ifi~g~~i------------GG~d~l~~l~~~G~L~~~L~ 104 (109)
T 3ipz_A 57 ENEMLRQGLKEY--SN----------WPTFPQLYIGGEFF------------GGCDITLEAFKTGELQEEVE 104 (109)
T ss_dssp GCHHHHHHHHHH--HT----------CSSSCEEEETTEEE------------ECHHHHHHHHHHSHHHHHHH
T ss_pred CCHHHHHHHHHH--HC----------CCCCCeEEECCEEE------------eCHHHHHHHHHcCcHHHHHH
Confidence 356677777652 23 45788877788754 77788889999999998875
No 63
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=23.80 E-value=41 Score=28.39 Aligned_cols=52 Identities=23% Similarity=0.307 Sum_probs=40.9
Q ss_pred chHHHHHHHhhcCCCCCCCCcEEEEEcCCcceeecCCceeecCCCccccccCCCchhhHhhhhccHHHHHHH-cCce
Q 010950 192 TDDATRKYFEGHKYFGLESDQVTFFQQGTIPCVSKDGRFIMETPYKVAKAPDGNGGVYSALKSSKLLEDMAT-RGIK 267 (497)
Q Consensus 192 t~~~t~~~~~~~~~FGl~~~~v~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhGgi~~aL~~sg~l~~l~~-~G~~ 267 (497)
.+.++++++++.. | +.++|.+-.+|+.+ |..|...+|+++|-|+.|++ .|++
T Consensus 60 ~~~~~r~~l~~~s--g----------~~TvPqIFI~g~~I------------GG~Ddl~~l~~~GeL~~lL~~~Gi~ 112 (118)
T 2wul_A 60 DDPELRQGIKDYS--N----------WPTIPQVYLNGEFV------------GGCDILLQMHQNGDLVEELKKLGIH 112 (118)
T ss_dssp SCHHHHHHHHHHH--T----------CCSSCEEEETTEEE------------ECHHHHHHHHHHTHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHhc--c----------CCCCCeEeECCEEE------------CCHHHHHHHHHCCCHHHHHHHcCCc
Confidence 4578899998732 2 46789888888765 88999999999999988776 4654
Done!