Query 010957
Match_columns 496
No_of_seqs 219 out of 1213
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 06:29:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010957.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010957hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG5023 Tubulin [Cytoskeleton] 100.0 7.5E-91 1.6E-95 683.5 24.4 375 1-487 1-427 (443)
2 cd06060 misato Human Misato sh 100.0 7.1E-83 1.5E-87 673.9 29.7 397 2-487 1-493 (493)
3 PLN00221 tubulin alpha chain; 100.0 3.7E-74 7.9E-79 607.0 25.7 378 1-488 1-435 (450)
4 PTZ00335 tubulin alpha chain; 100.0 4.3E-72 9.3E-77 590.9 25.5 377 1-487 1-434 (448)
5 PLN00222 tubulin gamma chain; 100.0 9.2E-71 2E-75 581.2 25.2 375 1-487 2-440 (454)
6 PTZ00010 tubulin beta chain; P 100.0 1.5E-70 3.2E-75 579.9 26.7 377 1-487 1-424 (445)
7 cd02188 gamma_tubulin Gamma-tu 100.0 1.6E-70 3.4E-75 576.5 25.4 374 2-485 1-431 (431)
8 PTZ00387 epsilon tubulin; Prov 100.0 3.9E-70 8.5E-75 576.7 25.4 372 1-487 1-448 (465)
9 cd02186 alpha_tubulin The tubu 100.0 6E-70 1.3E-74 574.0 26.0 376 2-487 1-433 (434)
10 PLN00220 tubulin beta chain; P 100.0 1.1E-69 2.4E-74 574.4 25.7 377 1-487 1-424 (447)
11 cd02187 beta_tubulin The tubul 100.0 2.5E-69 5.4E-74 568.4 26.5 376 2-487 1-423 (425)
12 KOG1374 Gamma tubulin [Cytoske 100.0 1E-68 2.2E-73 527.7 23.8 376 1-488 2-439 (448)
13 KOG2530 Members of tubulin/Fts 100.0 2.6E-69 5.6E-74 542.7 18.4 352 1-396 1-354 (483)
14 cd02189 delta_tubulin The tubu 100.0 3.7E-65 8.1E-70 539.3 27.4 378 4-486 2-445 (446)
15 cd02190 epsilon_tubulin The tu 100.0 3.7E-63 8E-68 514.1 23.3 332 2-487 1-378 (379)
16 cd06059 Tubulin The tubulin su 100.0 6.6E-59 1.4E-63 484.7 24.5 335 3-487 1-382 (382)
17 KOG1376 Alpha tubulin [Cytoske 100.0 3.5E-58 7.5E-63 452.0 15.7 366 1-482 1-406 (407)
18 PF14881 Tubulin_3: Tubulin do 100.0 7.8E-44 1.7E-48 332.3 14.1 171 155-338 6-180 (180)
19 KOG1375 Beta tubulin [Cytoskel 100.0 2.3E-42 5E-47 341.9 9.2 299 44-487 8-348 (369)
20 cd00286 Tubulin_FtsZ Tubulin/F 100.0 2.5E-41 5.3E-46 346.3 17.0 222 3-372 1-224 (328)
21 PF00091 Tubulin: Tubulin/FtsZ 100.0 1.4E-37 3E-42 300.3 9.7 212 3-318 1-214 (216)
22 PF10644 Misat_Tub_SegII: Misa 100.0 1.1E-33 2.4E-38 245.7 8.7 114 2-121 1-114 (115)
23 smart00864 Tubulin Tubulin/Fts 99.9 7.8E-26 1.7E-30 214.5 8.0 176 62-339 9-191 (192)
24 cd02202 FtsZ_type2 FtsZ is a G 99.9 4E-21 8.6E-26 197.7 13.5 150 190-367 72-227 (349)
25 cd02191 FtsZ FtsZ is a GTPase 99.7 1.5E-16 3.3E-21 160.8 7.5 146 190-367 64-210 (303)
26 TIGR00065 ftsZ cell division p 99.6 2.3E-15 4.9E-20 154.8 7.8 147 190-368 81-228 (349)
27 cd02201 FtsZ_type1 FtsZ is a G 99.5 8.2E-15 1.8E-19 148.7 8.0 149 190-369 64-213 (304)
28 PRK13018 cell division protein 99.4 2.2E-13 4.8E-18 140.8 8.6 146 190-367 92-238 (378)
29 PRK09330 cell division protein 99.3 5.1E-12 1.1E-16 130.8 6.8 147 190-367 77-224 (384)
30 COG0206 FtsZ Cell division GTP 94.9 0.073 1.6E-06 54.8 7.2 141 203-369 82-223 (338)
31 PF03953 Tubulin_C: Tubulin C- 93.9 0.19 4.2E-06 44.2 6.8 36 409-444 81-126 (126)
32 TIGR00824 EIIA-man PTS system, 78.7 7.3 0.00016 33.7 6.6 37 203-239 41-78 (116)
33 PF03610 EIIA-man: PTS system 78.3 4.7 0.0001 34.6 5.3 34 203-236 40-74 (116)
34 PRK14484 phosphotransferase ma 78.3 2.8 6.1E-05 37.0 3.9 43 203-247 41-83 (124)
35 cd00006 PTS_IIA_man PTS_IIA, P 77.3 7.5 0.00016 33.8 6.4 36 203-238 40-76 (122)
36 PF13809 Tubulin_2: Tubulin li 72.4 18 0.0004 37.4 8.8 40 223-262 150-195 (345)
37 KOG3178 Hydroxyindole-O-methyl 57.1 10 0.00022 39.1 3.3 43 212-258 167-209 (342)
38 PRK15088 PTS system mannose-sp 54.9 31 0.00068 35.5 6.5 39 203-241 42-81 (322)
39 TIGR02364 dha_pts dihydroxyace 45.7 26 0.00056 30.8 3.7 30 203-233 41-71 (125)
40 cd02190 epsilon_tubulin The tu 43.2 16 0.00034 38.5 2.2 88 160-248 19-124 (379)
41 PF02353 CMAS: Mycolic acid cy 36.4 49 0.0011 33.2 4.4 49 203-257 43-92 (273)
42 PF12953 DUF3842: Domain of un 35.4 39 0.00084 30.0 3.0 25 234-258 10-35 (131)
43 COG2893 ManX Phosphotransferas 31.3 1.1E+02 0.0023 27.7 5.3 45 203-251 42-87 (143)
44 PF09949 DUF2183: Uncharacteri 30.4 1.4E+02 0.003 25.3 5.5 54 204-257 10-71 (100)
45 PF03358 FMN_red: NADPH-depend 26.0 3.4E+02 0.0073 23.8 7.8 71 204-283 58-133 (152)
46 COG3958 Transketolase, C-termi 24.3 1.2E+02 0.0027 30.7 4.8 44 210-258 237-280 (312)
47 PF06908 DUF1273: Protein of u 22.7 2E+02 0.0044 26.8 5.7 82 204-300 29-111 (177)
48 cd01833 XynB_like SGNH_hydrola 22.6 3.6E+02 0.0078 23.5 7.3 40 239-283 68-107 (157)
49 PF13508 Acetyltransf_7: Acety 21.7 1E+02 0.0022 23.8 3.1 24 234-257 41-64 (79)
No 1
>COG5023 Tubulin [Cytoskeleton]
Probab=100.00 E-value=7.5e-91 Score=683.50 Aligned_cols=375 Identities=21% Similarity=0.317 Sum_probs=330.7
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-cccc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSM 79 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l 79 (496)
||||||||+||||||||+.||+++|.||++.++|...........+.+|||+ |+.+| +|+||+|+|||||+ |+.+
T Consensus 1 mREIItlq~GQcGnQiG~~fWe~~c~EHGI~~~G~~~~~~~~~~er~~vfF~--e~~~~--k~vPRaI~vDLEP~vid~v 76 (443)
T COG5023 1 MREIITLQVGQCGNQIGNAFWETLCLEHGIGPDGTLLDSSDEGDERFDVFFY--EASDG--KFVPRAILVDLEPGVIDQV 76 (443)
T ss_pred CceeEEEecccchhHHHHHHHHHHHHhhCcCCCCCCCCCcccccccccceee--ecCCC--ccccceEEEecCcchHhhh
Confidence 9999999999999999999999999999999999854433345568899996 77788 99999999999999 9888
Q ss_pred cccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccce
Q 010957 80 SSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVE 159 (496)
Q Consensus 80 ~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~ 159 (496)
+. +| +++||+|++ ++.|++|+|||
T Consensus 77 ~~---------------------------g~------y~~lf~Pen----~i~gkegAgNn------------------- 100 (443)
T COG5023 77 RN---------------------------GP------YGSLFHPEN----IIFGKEGAGNN------------------- 100 (443)
T ss_pred cc---------------------------Cc------cccccChhh----eeecccccccc-------------------
Confidence 76 56 899999999 99999999999
Q ss_pred eeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHH
Q 010957 160 FWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAA 238 (496)
Q Consensus 160 ~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s 238 (496)
| ++|| |++|+++ .|+++|+|||++|.||.|||||++||++||| |||||
T Consensus 101 -w---A~Gh---------------------YtvG~e~------~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~Gs 149 (443)
T COG5023 101 -W---ARGH---------------------YTVGKEI------IDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGS 149 (443)
T ss_pred -c---cccc---------------------cchhHHH------HHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHH
Confidence 9 9998 9999999 9999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCCh
Q 010957 239 DLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKP 318 (496)
Q Consensus 239 ~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~ 318 (496)
.|||+|++|||||.+.+|+|+|.+ +.+++||||||++|++++|.+++|++|++||++|++ +|.+.|+++.|+|
T Consensus 150 lLLerl~~eypkK~~~tfSV~P~p------~~Sd~VVePYNsvLt~h~l~ensD~tf~~DNeal~d-i~~~~L~i~~P~y 222 (443)
T COG5023 150 LLLERLREEYPKKIKLTFSVFPAP------KVSDVVVEPYNSVLTLHRLLENSDCTFVVDNEALYD-ICRRNLRIQNPSY 222 (443)
T ss_pred HHHHHHHHhcchhheeEEEeccCC------ccCcceecccHHHHHHHHHHhcCCceEEechHHHHH-HHHHhcCCCCCCh
Confidence 999999999999999999999987 689999999999999999999999999999999999 9999999999999
Q ss_pred hhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccchhhcCCCCCCCCCchh--------hhH
Q 010957 319 YHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALNGK--------QHE 390 (496)
Q Consensus 319 ~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~~~--------~~~ 390 (496)
.|+|+|||++|+++|.++||+ |. .+++|++|..+|+|+||.|| .+..+.|+.+...+ ++.
T Consensus 223 ~~lN~LIs~VmSsvTtslRfp--G~--------ln~dl~~~~~nLVP~PrlHF--~l~sytP~~s~~~~~~~~~sv~evt 290 (443)
T COG5023 223 DDLNQLISTVMSSVTTSLRFP--GY--------LNVDLRSIQTNLVPYPRLHF--PLVSYTPFTSDGSAAHEKNSVSEVT 290 (443)
T ss_pred HHHHHHHHHHHHhhhheeecC--cc--------ccchHHHHHhcCCCCCcccc--cccccCcccchhhHHHhcccHHHHH
Confidence 999999999999999999999 65 78999999999999999998 45567777665222 222
Q ss_pred HHHHh------ccCCCCcCCcC--------------------------CCcccCCCCCc-cceeccCc---------eeE
Q 010957 391 QSLLG------NLQPLTPELLN--------------------------SPFVGSSPRGS-LEVHSIPM---------AVR 428 (496)
Q Consensus 391 ~~~~~------~~~~~tp~~~~--------------------------~~~~~~~~~~~-~~~~sip~---------~~~ 428 (496)
.+++. .+.|..+.... ..|+.|.|.+. .++|++|+ .++
T Consensus 291 ~~~f~p~N~mv~~dpr~g~y~~~~~l~rG~v~~~dV~~a~~~v~~k~~~~Fv~W~P~~~~vai~~~~P~~~~~~~~s~~~ 370 (443)
T COG5023 291 NQLFDPKNQMVSCDPRKGRYMAVCLLFRGDVDPRDVSRAVTRVQSKRTIQFVEWCPTGFKVAICKRPPSEPAEVDVSGCM 370 (443)
T ss_pred HHHhCcccceeeecCCCCeeeehhHHHhcCCCHHHHHHHHHHHHhcCcccccccCCcceeeeeeccCCcccccceeeeEe
Confidence 22221 11233222111 13444555554 78898886 478
Q ss_pred eecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccC
Q 010957 429 LRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 429 L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
|+|+|+|.+.|+|+..+|++|+.||+|| |||.++||+++||.|++|.++.|.++|++
T Consensus 371 lsNtTsi~e~fkr~~~qFd~mf~krAFl--hwY~~egmee~EFsEare~~~~L~~eY~~ 427 (443)
T COG5023 371 LSNTTSIAEAFKRIDDQFDLMFKKRAFL--HWYVGEGMEEGEFSEAREDVADLEEEYEA 427 (443)
T ss_pred ecCcHHHHHHHHHhhhHHHHHHHhhHHH--HHHhhccCcccchhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987 99999999999999999999999999986
No 2
>cd06060 misato Human Misato shows similarity with Tubulin/FtsZ family of GTPases and is localized to the the outer membrane of mitochondria. It has a role in mitochondrial fusion and in mitochondrial distribution and morphology. Mutations in its Drosophila homolog (misato) lead to irregular chromosome segregation during mitosis. Deletion of the budding yeast homolog DML1 is lethal and unregulate expression of DML1 leads to mitochondrial dispersion and abnormalities in cell morphology. The Misato/DML1 protein family is conserved from yeast to human, but its exact function is still unknown.
Probab=100.00 E-value=7.1e-83 Score=673.92 Aligned_cols=397 Identities=33% Similarity=0.540 Sum_probs=339.7
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCCcccccc
Q 010957 2 REIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGSLGSMSS 81 (496)
Q Consensus 2 rEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~~~~l~~ 81 (496)
|||||||+||++|||||||||+||++|+|.+++.. ..++++|+||+|+|.+|.+||+||+|+||||+++|+|++
T Consensus 1 rEIiTlq~G~~aN~vgtHfwN~Qe~~~~y~~~~~~------~~~~~dvl~r~g~~~~g~~tytPR~l~~Dlkg~~gsl~~ 74 (493)
T cd06060 1 REVLTLQLGHYANFVGTHWWNLQEANFGYDPDSPA------SELDHDVLYREGRTRQGQVTYTPRLLLLDLKGTLGHLPE 74 (493)
T ss_pred CceEEEeccCccccHhhhhhhhhhhhcCCCCCCcc------ccCCCceeeeccccCCCceeEcCcEEEEecCCccccccc
Confidence 89999999999999999999999999998877642 467999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccceee
Q 010957 82 RGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVEFW 161 (496)
Q Consensus 82 ~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~~W 161 (496)
.|.| .. ++|+++|+||
T Consensus 75 ~~~l-----------------------~~-----------------------------------------~~l~~~v~~W 90 (493)
T cd06060 75 EGSL-----------------------KV-----------------------------------------YNLEASVNVW 90 (493)
T ss_pred ccCc-----------------------CC-----------------------------------------cccccchhhh
Confidence 5532 00 1346789999
Q ss_pred eccccccccCCchhhcCCccCC--CCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCchhhHHH
Q 010957 162 TDFSKVHYHPQSLYELGGLWMD--PQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGFSAVAAD 239 (496)
Q Consensus 162 sDf~~~~~hPrS~~~l~~~~~~--~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~sGl~s~ 239 (496)
|||+|.+|||||+++|++|+|+ ..+|+.|++|.++|++.+..|+++|+||+++|+||+|||||+++|++|||||+|++
T Consensus 91 SDy~r~~yhPrS~~~L~~~~~~~~~~~fd~fg~G~~~f~~~~~~d~~~DrIR~~vEeCD~LQGFqi~~sl~gG~sG~gs~ 170 (493)
T cd06060 91 SDYLYARLHPRSINVINQYNHDGTSQPFEVFGQGESLWQDESFQEEFEDRLRFYVEECDYLQGFQVLCDLHDGFSGVGAK 170 (493)
T ss_pred hhcceeeeCCCceeeccchhcCCCCCCccccccChhhhcchhhHHHHHHHHHHHHHhCcccccEEEEEecCCcccchHHH
Confidence 9999999999999999999995 45899999999999998889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCcc-c----cccccccccCC
Q 010957 240 LLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFL-N----ESKASTLLCIE 314 (496)
Q Consensus 240 lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l-~----~~~~~~~l~~~ 314 (496)
++|+|+|||||+.+++|++.|...... ...++++++||++|++++|.++||+++||..+.. + .+...+.+.++
T Consensus 171 lLE~L~DEy~k~~i~~~~v~P~~~~~~--~~~~~vv~~yNs~LSl~~L~e~sdl~vPl~~~~~~w~~~~~p~~~~~l~~d 248 (493)
T cd06060 171 CLEHLQDEYGKASLLFPGLPPVIPPDA--SSDKNSIRVLNTALGLAQLSEHSSLFVPLSLSGTLWRKPGPPRTFPYLNYD 248 (493)
T ss_pred HHHHHHHhcCccceeEEEeCCCccccc--ccchhHHHHHHHHHHHHHHHhcCCEEEEEecccccccCCCCCCCCcccccC
Confidence 999999999999999999998652110 1235789999999999999999999999997632 1 12346778899
Q ss_pred CCChhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccchhhcCCCCCCCCCchhhhHHHHH
Q 010957 315 NEKPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALNGKQHEQSLL 394 (496)
Q Consensus 315 ~~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~~~~~~~~~~ 394 (496)
..+.||++||+|++|+|+|+|+|++.. ..+|.+|+..|.+.+|+ ++++..++|+|...++++.+.+.
T Consensus 249 ~~~~~htSAllA~aldT~TLp~Rl~~~-----------~~~m~~l~~~l~~~gRk--i~~~~~a~P~p~~~~~~l~d~L~ 315 (493)
T cd06060 249 AELPYHTSALLATALDTLTLPYRLKSS-----------PSSLSGLCDDLSFSGRK--VVAAGLALPFPMVGGQDLIDFLD 315 (493)
T ss_pred CCCchHHHHHHHHHHhhccccceeccC-----------CccHHHHHHHhhhccch--hhhhccCCCCCCCCCCcHHHHHH
Confidence 999999999999999999999999943 24799999999998887 77888999999987887777654
Q ss_pred hc----c-CCCCcCCcC---------------------------------------------------------------
Q 010957 395 GN----L-QPLTPELLN--------------------------------------------------------------- 406 (496)
Q Consensus 395 ~~----~-~~~tp~~~~--------------------------------------------------------------- 406 (496)
+. + .+++|++..
T Consensus 316 ~~~~~~~~~~l~p~~~~~~~~~~qsv~~rG~~~~~~~~~~~~~~~~~~~~~~c~s~~~~l~~y~~~~~~~s~~~~~~~~~ 395 (493)
T cd06060 316 QSDGAVPWLQLTPGCQIGTRCVIQSVVLRGIPEERLKRRLLAGDQARSPAYACSSVEEMLQLYLQCQYPGSMSALSVLPL 395 (493)
T ss_pred hcCCCCCccccCCCCccCceeeeeeehhcCCChhhccccccccccccccchhcCCHHHHHHHHHHhccCCcchhheecCC
Confidence 21 1 234443221
Q ss_pred -----CCcccCCCC--------------Ccc--ceeccCceeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccC
Q 010957 407 -----SPFVGSSPR--------------GSL--EVHSIPMAVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWG 465 (496)
Q Consensus 407 -----~~~~~~~~~--------------~~~--~~~sip~~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g 465 (496)
-|||.++.. +.. .|+|||++|+|+|+++++++|++|+++++|++++|++ .|...|
T Consensus 396 p~~~~~PfP~if~~~v~~~G~~~~~~~~~~~~~~V~s~p~~a~l~ss~~l~~~l~~l~~~~~kl~~~r~~----~~~~~g 471 (493)
T cd06060 396 PLKIRVPFPYIFNPNISADGFVLDNSSRGSAGADVESIPVLAALQSSPSLGEMLESLHRQLSKLDLRRKA----SFFESG 471 (493)
T ss_pred CCCCCCCCchhhccccCCCccccCCCcccccccceeechhhhhhcCchHHHHHHHHHHHHHHhhhhHhhh----cccccc
Confidence 145544321 111 4899999999999999999999999999999999995 788899
Q ss_pred CCcchHHHHHHHHHHHHhcccC
Q 010957 466 FADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 466 ~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
+|+|||+|++|.|.+|+++|++
T Consensus 472 ~e~de~~e~le~L~~~~~~Y~~ 493 (493)
T cd06060 472 LEEDEYKELLEQLLDLAECYED 493 (493)
T ss_pred cCHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999974
No 3
>PLN00221 tubulin alpha chain; Provisional
Probab=100.00 E-value=3.7e-74 Score=606.97 Aligned_cols=378 Identities=19% Similarity=0.272 Sum_probs=309.8
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCcccc--ccCCccceeeeccccCCCccccceeeeEeccCCC-cc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFR--NQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LG 77 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~--~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~ 77 (496)
||||||||+||||||||..||++++.||+++++|....... ......++||+ ++.+| +|+||+|+||++++ ++
T Consensus 1 m~EiItiqvGQcGnQIG~~fW~~l~~Eh~i~~~g~~~~~~~~~~~~~~~~~fF~--e~~~~--~~~pRav~iD~e~~~i~ 76 (450)
T PLN00221 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFS--ETGAG--KHVPRAVFVDLEPTVID 76 (450)
T ss_pred CCeEEEEeCCchHHHHHHHHHHHHHHHhCcCCCCCccCCccccccchhhhhhee--ccCCc--ccccchhcCCCChhhhh
Confidence 99999999999999999999999999999988875422110 01235789996 55666 89999999999999 88
Q ss_pred cccccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhccccc
Q 010957 78 SMSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNH 157 (496)
Q Consensus 78 ~l~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~ 157 (496)
.+++ ++ ++.||++++ ++.+++|+|||
T Consensus 77 ~i~~---------------------------~~------~~~lf~~~~----~i~~~~gagNn----------------- 102 (450)
T PLN00221 77 EVRT---------------------------GT------YRQLFHPEQ----LISGKEDAANN----------------- 102 (450)
T ss_pred hhcc---------------------------Cc------cccccCccc----eeccCCCcccc-----------------
Confidence 8865 23 567899988 88999999999
Q ss_pred ceeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhh
Q 010957 158 VEFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAV 236 (496)
Q Consensus 158 v~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl 236 (496)
| ++|| |+.|.++ .|+++|+||+++|+||+|||||++||++||| ||+
T Consensus 103 ---w---a~Gy---------------------~~~g~~~------~~~i~d~ir~~~E~cD~l~gf~i~~Sl~GGtGSGl 149 (450)
T PLN00221 103 ---F---ARGH---------------------YTIGKEI------VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGL 149 (450)
T ss_pred ---c---cccc---------------------cchhHHH------HHHHHHHHHHHHHhccCccceeEeeccCCCccchH
Confidence 9 9997 8899998 9999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCC
Q 010957 237 AADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENE 316 (496)
Q Consensus 237 ~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~ 316 (496)
|++++|+|+|||||+.+++++|+|+. ...++++++||++|++++|.+++|+++|++|++|++ +|.+.++++.|
T Consensus 150 gs~~le~l~d~y~~~~~~~~~v~P~~------~~~~~vv~~YN~~Lsl~~l~e~~d~~~~~dN~al~~-~~~~~~~~~~p 222 (450)
T PLN00221 150 GSLLLERLSVDYGKKSKLGFTVYPSP------QVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYD-ICRRSLDIERP 222 (450)
T ss_pred HHHHHHHHHHhcccccceeeEeeCCC------cCCCCchhhhHHHHhHHHHHhhCceeeecchHHHHH-HHHhhcCCCCC
Confidence 99999999999999999999999986 456789999999999999999999999999999999 89999999999
Q ss_pred ChhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCCC-----chhhhH
Q 010957 317 KPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPAL-----NGKQHE 390 (496)
Q Consensus 317 ~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~~-----~~~~~~ 390 (496)
++.++|.|||++|+++|.++||+ |. .+.+|++++.+|+|+||.||+ +++.|.++.... +-.++.
T Consensus 223 ~~~dlN~lIa~~is~~T~s~RF~--g~--------ln~dl~~l~~nLvP~P~lhfl~~s~~P~~~~~~~~~~~~s~~~l~ 292 (450)
T PLN00221 223 TYTNLNRLISQVISSLTASLRFD--GA--------LNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292 (450)
T ss_pred CHHHHHHHHhhhccccccccccc--cc--------ccCCHHHHHHhcCCCCCceeeccccCccccccccccccCCHHHHH
Confidence 99999999999999999999999 54 578999999999999999983 333333332111 112223
Q ss_pred HHHHhc---cCCCCcCCcC-----------------------------CCcccCCCCCc-cceeccC-------------
Q 010957 391 QSLLGN---LQPLTPELLN-----------------------------SPFVGSSPRGS-LEVHSIP------------- 424 (496)
Q Consensus 391 ~~~~~~---~~~~tp~~~~-----------------------------~~~~~~~~~~~-~~~~sip------------- 424 (496)
..++.. +....|.... ..|+.|-|.+. ..++..|
T Consensus 293 ~~l~~~~~~l~~~~~~~~kyla~~~~~RG~~~~~~v~~~~~~~~~~~~~~f~~W~p~~~~~~i~~~~~~~~~~~~~~~~~ 372 (450)
T PLN00221 293 NSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQ 372 (450)
T ss_pred HHHhcccceeeecCCCcchHHHHHHHHcCCCCHHHHHHHHHHHHhcCCccccccCCCCEeeeecCCCCccCCCccccccc
Confidence 332211 0011111000 12333333322 3444333
Q ss_pred -ceeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccCC
Q 010957 425 -MAVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKPH 488 (496)
Q Consensus 425 -~~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~~ 488 (496)
.++.|+|+|+|..+|+++.++|++|+.||+++ |||+++|||++||.||++.|++|+++|++-
T Consensus 373 ~s~~~l~NstsI~~~f~~i~~~f~~mf~rkAfl--h~Y~~eGmee~eF~EA~~~l~~li~~Y~~~ 435 (450)
T PLN00221 373 RAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFV--HWYVGEGMEEGEFSEAREDLAALEKDYEEV 435 (450)
T ss_pred eeEEEecCCcHHHHHHHHHHHHHHHHHhhcchh--hhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 15679999999999999999999999999987 999999999999999999999999999853
No 4
>PTZ00335 tubulin alpha chain; Provisional
Probab=100.00 E-value=4.3e-72 Score=590.93 Aligned_cols=377 Identities=18% Similarity=0.275 Sum_probs=308.1
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCcccc--ccCCccceeeeccccCCCccccceeeeEeccCCC-cc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFR--NQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LG 77 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~--~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~ 77 (496)
||||||||+||||||||..||++++.||+++++|....... ......++||+ |+.+| +|+||+|+||++++ ++
T Consensus 1 M~EiI~iqiGqcGnqiG~~fW~~~~~Eh~i~~~g~~~~~~~~~~~~~~~~~fF~--e~~~~--~~~pRav~iD~e~~~i~ 76 (448)
T PTZ00335 1 MREVISIHIGQAGIQVGNACWELFCLEHGIQPDGQMPSDKNIGVEDDAFNTFFS--ETGAG--KHVPRCVFLDLEPTVID 76 (448)
T ss_pred CCcEEEEeCCccHHHHHHHHHHHHHHHhCcCCCCCccCCCcccccchhhcceeE--EcCCC--ccccccccccCCcchhh
Confidence 99999999999999999999999999999988875422110 01235689996 55666 89999999999999 88
Q ss_pred cccccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhccccc
Q 010957 78 SMSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNH 157 (496)
Q Consensus 78 ~l~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~ 157 (496)
.+++ ++ +++||++++ ++.+++|+|||
T Consensus 77 ~i~~---------------------------~~------~~~l~~~~~----~i~~~~gagnn----------------- 102 (448)
T PTZ00335 77 EVRT---------------------------GT------YRQLFHPEQ----LISGKEDAANN----------------- 102 (448)
T ss_pred hccc---------------------------Cc------cccccCchh----eeecCCCCCCc-----------------
Confidence 8865 23 567888888 88999999999
Q ss_pred ceeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhh
Q 010957 158 VEFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAV 236 (496)
Q Consensus 158 v~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl 236 (496)
| ++|| |+.|.++ .|+++|+||+++|+||+||||+++|+++||| ||+
T Consensus 103 ---w---a~Gy---------------------~~~G~~~------~d~i~d~ir~~~E~cD~l~gf~i~~Sl~GGTGSGl 149 (448)
T PTZ00335 103 ---F---ARGH---------------------YTIGKEI------VDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGL 149 (448)
T ss_pred ---c---cccc---------------------cchhhhH------hHHHHHHHHHhHHhccCccceeEeeccCCCccchH
Confidence 9 9997 8899998 9999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCC
Q 010957 237 AADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENE 316 (496)
Q Consensus 237 ~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~ 316 (496)
|+.++|.|+||||++++++++|+|+. ...++++++||++|+|++|.++||++++++|++|++ +|.+.+.++.+
T Consensus 150 gs~l~e~l~d~yp~~~~~~~~v~P~~------~~~~~~v~~YN~~Lsl~~L~e~~d~~~~~dN~al~~-i~~~~~~~~~~ 222 (448)
T PTZ00335 150 GSLLLERLSVDYGKKSKLGFTIYPSP------QVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYD-ICRRNLDIERP 222 (448)
T ss_pred HHHHHHHHHHhccccceeeEEecCCC------CCCCcceeehHHHHhHHHHHhhCCeeeeechHHHHH-HHHHhcCCCCC
Confidence 99999999999999999999999986 456889999999999999999999999999999998 88888889999
Q ss_pred ChhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCCC-----chhhhH
Q 010957 317 KPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPAL-----NGKQHE 390 (496)
Q Consensus 317 ~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~~-----~~~~~~ 390 (496)
++.++|++||++|+++|.++||+ |. .+.+|++++.+|+|+||.||+ +++.|.++.... +-.++.
T Consensus 223 ~~~~~N~~Ia~~is~~t~~~rf~--g~--------~~~dl~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~ 292 (448)
T PTZ00335 223 TYTNLNRLIAQVISSLTASLRFD--GA--------LNVDLTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEIT 292 (448)
T ss_pred CHHHHHHHHHhhhcccccccccc--cc--------cCCCHHHHhccccCCCCceecccccCcccccccccccCCCHHHHH
Confidence 99999999999999999999998 54 568999999999999999983 333333332111 112222
Q ss_pred HHHHhc---cCCCCcCCcC-----------------------------CCcccCCCCCc-cceeccC-------------
Q 010957 391 QSLLGN---LQPLTPELLN-----------------------------SPFVGSSPRGS-LEVHSIP------------- 424 (496)
Q Consensus 391 ~~~~~~---~~~~tp~~~~-----------------------------~~~~~~~~~~~-~~~~sip------------- 424 (496)
..++.. +....|.... ..|+.|-|.+. ..++..|
T Consensus 293 ~~l~~~~n~~~~~~~~~~~~ls~~~~~RG~~~~~~i~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~~~~~~~~ 372 (448)
T PTZ00335 293 NSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQ 372 (448)
T ss_pred HHhcCccceeEecCCCccchHHHHHHHcCCCCHHHHHHHHHHHHhhCCCcCCccCCCCEeeeecCCCCccCCCccccccc
Confidence 222210 0000111000 02333333322 3444332
Q ss_pred -ceeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccC
Q 010957 425 -MAVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 425 -~~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
.++.|+|+|+|..+|++++++|++|+.||+++ |||+++|||++||.||++.|++|+++|++
T Consensus 373 ~s~~~lsNstsI~~~f~~i~~~f~~mf~rkAfl--h~Y~~eGmee~eF~EA~~~l~~li~~Y~~ 434 (448)
T PTZ00335 373 RAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFV--HWYVGEGMEEGEFSEAREDLAALEKDYEE 434 (448)
T ss_pred eEEEEecCCcHHHHHHHHHHHHHHHHHhhcchh--hhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 15679999999999999999999999999887 99999999999999999999999999985
No 5
>PLN00222 tubulin gamma chain; Provisional
Probab=100.00 E-value=9.2e-71 Score=581.16 Aligned_cols=375 Identities=19% Similarity=0.285 Sum_probs=305.3
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-cccc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSM 79 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l 79 (496)
||||||||+||||||||..||++++.||++++++.............++||+ ++.+| +|+||+|+||++++ ++.+
T Consensus 2 m~EiI~i~vGQcGnqiG~~~w~~l~~Eh~i~~~g~~~~~~~~~~~~~~~fF~--e~~~~--~~~pRav~iD~e~~vi~~i 77 (454)
T PLN00222 2 PREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFY--QADDE--HYIPRALLIDLEPRVINGI 77 (454)
T ss_pred CccEEEEecCchHHHHHHHHHHHHHHHhCCCCCCCccCccccccccccceeE--EcCCC--cccceeeecCCCcchhhhh
Confidence 6999999999999999999999999999998776542211111246789997 44566 89999999999999 8888
Q ss_pred cccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCC--CCCCCcchhccccchhhccccc
Q 010957 80 SSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTS--SGKSDSQREIQDKDIVEFLDNH 157 (496)
Q Consensus 80 ~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~--~~~nn~~~~~~~~~~~~~l~~~ 157 (496)
++ ++ +++||++++ ++.+++ |+|||
T Consensus 78 ~~---------------------------~~------~~~lf~~~~----~~~~~~~~gagnn----------------- 103 (454)
T PLN00222 78 QN---------------------------SE------YRNLYNHEN----IFVSDHGGGAGNN----------------- 103 (454)
T ss_pred cc---------------------------Cc------cccccCccc----eeecccCCCcccc-----------------
Confidence 54 23 567899888 888886 58889
Q ss_pred ceeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhh
Q 010957 158 VEFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAV 236 (496)
Q Consensus 158 v~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl 236 (496)
| ++|| ..|.++ .|+++|+||+++|.||++|||+++|+++||| ||+
T Consensus 104 ---~---a~Gy----------------------~~g~~~------~d~i~d~ir~~~E~cd~l~gf~i~~sl~GGTGSGl 149 (454)
T PLN00222 104 ---W---ASGY----------------------HQGEQV------EEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGM 149 (454)
T ss_pred ---h---HHhH----------------------HHHHHH------HHHHHHHHHHHHHhCCCccceEEeecCCCCccchH
Confidence 9 9994 468888 9999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCC
Q 010957 237 AADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENE 316 (496)
Q Consensus 237 ~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~ 316 (496)
|+.++|+|+|+||++.+++++|+|+.. ...++++++||++|+|++|.+++|++++++|++|++ +|.+.++++.|
T Consensus 150 gs~lle~L~d~y~~~~~~~~~v~P~~~-----~~~~~vv~~YN~~lsl~~l~~~~D~~~~~dN~al~~-ic~~~l~i~~p 223 (454)
T PLN00222 150 GSYLLEALNDRYSKKLVQTYSVFPNQM-----ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR-IAVDRLHLENP 223 (454)
T ss_pred HHHHHHHHHhhcCCcceeeEEecCCCc-----ccCCceeeecHHHHhHHHHHhcCCeeeEecHHHHHH-HHHHhcCCCCC
Confidence 999999999999999999999999752 246788999999999999999999999999999999 99999999999
Q ss_pred ChhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccchhhcCCCCCCCCCc---------hh
Q 010957 317 KPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALN---------GK 387 (496)
Q Consensus 317 ~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~---------~~ 387 (496)
++.++|+|||++|+++|+++||+ |. .+.+|++++.+|+|+||.||+. +...|+.... -.
T Consensus 224 ~~~dlN~lIA~~ls~~T~s~Rfp--g~--------ln~dl~~l~~nLvP~P~lhfl~--~s~~P~~~~~~~~~~~~~s~~ 291 (454)
T PLN00222 224 TFAQTNSLVSTVMSASTTTLRYP--GY--------MNNDLVGLLASLIPTPRCHFLM--TGYTPLTVERQANVIRKTTVL 291 (454)
T ss_pred CHHHHHHHhccccCCcccccCCC--Cc--------cCCCHHHHhhhcCCCCCceeec--cccccccccccccceeeCCHH
Confidence 99999999999999999999999 54 6789999999999999999832 2344442211 11
Q ss_pred hhHHHHHh---ccCCCCcCC-----cC-----------------------------CCcccCCCCCc-cceeccCc----
Q 010957 388 QHEQSLLG---NLQPLTPEL-----LN-----------------------------SPFVGSSPRGS-LEVHSIPM---- 425 (496)
Q Consensus 388 ~~~~~~~~---~~~~~tp~~-----~~-----------------------------~~~~~~~~~~~-~~~~sip~---- 425 (496)
++...++. .+....|.. .. ..|+.|-|.+. ..+|..|+
T Consensus 292 ~~~~~l~~~~n~~~~~~~~~~~~~~~k~la~~~~~RG~~~~~~v~~~~~~~~~~~~~~fv~W~p~~~k~~~~~~~~~~~~ 371 (454)
T PLN00222 292 DVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQVALSRKSPYVQT 371 (454)
T ss_pred HHHHHHhcccCceeecCCccccccccchHHHHHHHhCCCCHHHHHHHHHHHhhhCCccccccCCCCEeeeeccCCCCCCC
Confidence 22332321 110011111 00 12333334333 45555433
Q ss_pred -----eeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCC----cchHHHHHHHHHHHHhcccC
Q 010957 426 -----AVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFA----DDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 426 -----~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~----~~ef~e~~e~l~~l~~~Y~~ 487 (496)
++.|+|+|+|...|+++.++|++|+.||+++ |||+++||+ ++||+|+++.|++|+++|++
T Consensus 372 ~~~~s~~~lsNst~I~~~f~~i~~~f~~mf~rkAfl--H~Y~~~G~~~d~ee~eF~ea~~~l~~li~~Y~~ 440 (454)
T PLN00222 372 AHRVSGLMLANHTSIRHLFSKCLSQYDKLRKKQAFL--DNYRKFPMFADNDLSEFDESREIVESLVDEYKA 440 (454)
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHHHHHHHhhCccc--eeecCCCcccCcchhHHHHHHHHHHHHHHHHHH
Confidence 5679999999999999999999999999987 999999993 89999999999999999975
No 6
>PTZ00010 tubulin beta chain; Provisional
Probab=100.00 E-value=1.5e-70 Score=579.85 Aligned_cols=377 Identities=21% Similarity=0.298 Sum_probs=309.4
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-cccc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSM 79 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l 79 (496)
|||||+||+||||||||..||++++.||++.+++.............++||+ ++.+| +|+||+|+||++++ +..+
T Consensus 1 M~Eii~i~vGqcGnqiG~~~we~l~~eh~~~~~g~~~~~~~~~~~~~~~ff~--e~~~~--~~~pRav~iD~e~~vi~~i 76 (445)
T PTZ00010 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPTGTYQGDSDLQLERINVYYN--EATGG--RYVPRAVLMDLEPGTMDSV 76 (445)
T ss_pred CCcEEEEeccchHhHHHHHHHHHHHHHhCCCCCCCCCCCCcccccccceeec--ccCCC--ceEEeeeeccCChhhhhhh
Confidence 9999999999999999999999999999998776542211011135678996 55667 99999999999999 8777
Q ss_pred cccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccce
Q 010957 80 SSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVE 159 (496)
Q Consensus 80 ~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~ 159 (496)
+. .+ ++.||++++ ++.+++|+|||
T Consensus 77 ~~---------------------------~~------~~~lf~~~~----~~~~~~gagNn------------------- 100 (445)
T PTZ00010 77 RA---------------------------GP------YGQLFRPDN----FIFGQSGAGNN------------------- 100 (445)
T ss_pred cc---------------------------cc------hhhhcCccc----eeecccCCccc-------------------
Confidence 54 23 566888887 88999999999
Q ss_pred eeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHH
Q 010957 160 FWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAA 238 (496)
Q Consensus 160 ~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s 238 (496)
| ++|| |+.|.++ .|+++|+||+++|+||++|||+++|+++||| ||+|+
T Consensus 101 -w---a~G~---------------------~~~g~~~------~~~i~d~irk~~E~cd~l~gf~i~~Sl~GGTGSGlgs 149 (445)
T PTZ00010 101 -W---AKGH---------------------YTEGAEL------IDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGT 149 (445)
T ss_pred -c---ccch---------------------hhhhHHH------HHHHHHHHhhhhhhccCccceEEEeccCCCccccHHH
Confidence 9 9997 8899999 9999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCCh
Q 010957 239 DLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKP 318 (496)
Q Consensus 239 ~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~ 318 (496)
+++|.|+|||||+.+++++|+|+. +..++++++||++|++++|.+++|.+++++|++|++ +|.+.++++.|++
T Consensus 150 ~l~e~L~dey~~~~~~~~~v~P~~------~~~~~~v~~YN~~lsl~~l~~~~d~~i~~dN~al~~-i~~~~l~~~~p~~ 222 (445)
T PTZ00010 150 LLISKLREEYPDRIMMTFSVFPSP------KVSDTVVEPYNATLSVHQLVENADESMCIDNEALYD-ICFRTLKLTTPTY 222 (445)
T ss_pred HHHHHHHhhCCccceeeeEecCCc------ccCccchhhhHHHHhHHHHHhcCCceeeeccHHHHH-HHHHhccCCCCCH
Confidence 999999999999999999999987 457889999999999999999999999999999999 9999999999999
Q ss_pred hhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCC-----CchhhhHHH
Q 010957 319 YHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPA-----LNGKQHEQS 392 (496)
Q Consensus 319 ~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~-----~~~~~~~~~ 392 (496)
.++|+|||++|+++|+++||+ |. .+.+|++++++|+|+||.||+ +++.|.++... .+-.++...
T Consensus 223 ~~lN~lIaq~is~~t~~~Rfp--g~--------ln~dl~~l~tnLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~ 292 (445)
T PTZ00010 223 GDLNHLVSAVMSGVTCCLRFP--GQ--------LNSDLRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRGLSVPELTQQ 292 (445)
T ss_pred HHHHHHHHhhccccccceecC--Cc--------ccccHHHHHHHHhcCCCceeeecccCccccccccccccCCHHHHHHh
Confidence 999999999999999999999 54 678999999999999999983 33333333211 111222222
Q ss_pred HHh------ccCCCCcCCcC--------------------------CCcccCCCCCc-cceeccCc------eeEeeccc
Q 010957 393 LLG------NLQPLTPELLN--------------------------SPFVGSSPRGS-LEVHSIPM------AVRLRSSS 433 (496)
Q Consensus 393 ~~~------~~~~~tp~~~~--------------------------~~~~~~~~~~~-~~~~sip~------~~~L~n~t 433 (496)
+.. .+.|..+.... ..|+.|-|.+. ..+|..|+ ++.|+|+|
T Consensus 293 l~~~~n~~~~~~~~~~k~la~~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~s~~~lsNst 372 (445)
T PTZ00010 293 MFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSVTFIGNST 372 (445)
T ss_pred HhcccceEeecCCCcchhHHHHHHHcCCCCHHHHHHHHHHHHhhCCccCccccCCCEEEeecCcCCcCccceEEEecCCc
Confidence 221 01111110000 12333434332 34454543 57799999
Q ss_pred chHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccC
Q 010957 434 AILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 434 ~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
+|..+|+++.++|++|+.||+++ |||+++|||++||.||++.|++|+++|++
T Consensus 373 si~~~~~~i~~~f~~m~~rrAfl--h~Y~~eGmee~ef~EA~~~l~~li~~Y~~ 424 (445)
T PTZ00010 373 AIQEMFRRVGEQFTAMFRRKAFL--HWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 (445)
T ss_pred HHHHHHHHHHHHHHHHHhcCchh--hhhhccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 99999999999999999999999999985
No 7
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=100.00 E-value=1.6e-70 Score=576.52 Aligned_cols=374 Identities=19% Similarity=0.296 Sum_probs=304.4
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-ccccc
Q 010957 2 REIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMS 80 (496)
Q Consensus 2 rEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l~ 80 (496)
|||||||+||||||||..||++++.||++++++.............++||. |+.+| +|+||+|+||++++ ++.++
T Consensus 1 ~EiI~i~iGQcGnqIG~~~We~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~--e~~~~--~~~pRav~iD~Ep~vi~~i~ 76 (431)
T cd02188 1 REIITLQVGQCGNQIGSEFWKQLCAEHGISPDGILEDFATDGGDRKDVFFY--QADDE--HYVPRAILIDLEPRVINSIQ 76 (431)
T ss_pred CcEEEEEcCchHhHHHHHHHHHHHHHhCCCCCCCcCCCccccccccceeEE--ECCCC--ccCCcceeccCCcchhhhhh
Confidence 799999999999999999999999999998776542211111235789996 55666 99999999999999 88876
Q ss_pred ccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCC--CCCCCcchhccccchhhcccccc
Q 010957 81 SRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTS--SGKSDSQREIQDKDIVEFLDNHV 158 (496)
Q Consensus 81 ~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~--~~~nn~~~~~~~~~~~~~l~~~v 158 (496)
+ ++ ++.||++++ ++.++. |+|||
T Consensus 77 ~---------------------------~~------~~~lf~~~~----~~~~~~~~gagnn------------------ 101 (431)
T cd02188 77 N---------------------------SE------YRNLYNPEN----IFLSKHGGGAGNN------------------ 101 (431)
T ss_pred c---------------------------Cc------cccccCccc----eEeeccCCCcccc------------------
Confidence 5 33 567889888 888887 88999
Q ss_pred eeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhH
Q 010957 159 EFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVA 237 (496)
Q Consensus 159 ~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~ 237 (496)
| ++| |..|.++ .|+++|+||+++|+||+||||+++||++||| ||+|
T Consensus 102 --w---a~G----------------------y~~g~~~------~d~i~d~ir~~~E~cd~l~gf~i~~SlgGGTGSG~g 148 (431)
T cd02188 102 --W---ASG----------------------YSQGEEV------QEEILDIIDREADGSDSLEGFVLCHSIAGGTGSGMG 148 (431)
T ss_pred --H---HHH----------------------HHHHHHH------HHHHHHHHHHHHhcCCCcceeEEEecCCCCcchhHH
Confidence 9 999 4468888 9999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCC
Q 010957 238 ADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEK 317 (496)
Q Consensus 238 s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~ 317 (496)
+.|+|+|+|+|||+.+++++|+|+.. ...++++++||++|+|++|.+++|++++++|++|.+ +|.+.++++.++
T Consensus 149 s~l~e~L~d~y~~~~~~~~~V~P~~~-----~~s~~~v~~YN~~lsl~~l~e~~d~~~~~dN~al~~-i~~~~l~~~~~~ 222 (431)
T cd02188 149 SYLLERLNDRYPKKLIQTYSVFPNQD-----ESSDVVVQPYNSILTLKRLILNADCVVVLDNTALNR-IATDRLHIQNPT 222 (431)
T ss_pred HHHHHHHHhHcCcceeeeEEecCCCc-----cCCCccceecHHHHHHHHHHHhCCeeeecchHHHHH-HHHHhcCCCCCC
Confidence 99999999999999999999999762 124779999999999999999999999999999999 899999999999
Q ss_pred hhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCC-C-----chhhhH
Q 010957 318 PYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPA-L-----NGKQHE 390 (496)
Q Consensus 318 ~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~-~-----~~~~~~ 390 (496)
+.++|++||++|+++|+|+||+ |. .+++|++++.+|+|+||.||+ ++++|.++... . +-.++.
T Consensus 223 ~~~~N~~ia~~ls~~t~~~Rf~--g~--------ln~dl~~i~tnLvP~P~lhfl~~s~~P~~~~~~~~~~~~~s~~~l~ 292 (431)
T cd02188 223 FDQINSLVSTVMSASTTTLRYP--GY--------MNNDLISLIASLIPTPRLHFLMTSYTPLTSDQIAASVRKTTVLDVM 292 (431)
T ss_pred HHHHHHHHhccCCCcccceecC--Cc--------cCCCHHHHHHhcCCCCCceeeccccCccccchhhcceecCCHHHHH
Confidence 9999999999999999999998 54 678999999999999999983 33334333220 1 122333
Q ss_pred HHHHhc---cCCCCc-CCcC----------------------------C-CcccCCCCCc-cceeccCc---------ee
Q 010957 391 QSLLGN---LQPLTP-ELLN----------------------------S-PFVGSSPRGS-LEVHSIPM---------AV 427 (496)
Q Consensus 391 ~~~~~~---~~~~tp-~~~~----------------------------~-~~~~~~~~~~-~~~~sip~---------~~ 427 (496)
..+.+. +....| .... . .|+.|-|.+. ..++..|+ ++
T Consensus 293 ~~l~~~~n~m~~~~~~~~~k~la~~~~~RG~~~~~~~~~~~~~lk~~~~~~f~~W~p~~~~~~~~~~~~~~~~~~~~s~~ 372 (431)
T cd02188 293 RRLLQPKNIMVSTATRKNGCYISILNIIQGEVDPTQVHKSLQRIRERRLANFIPWGPASIQVALSKKSPYVPTAHRVSGL 372 (431)
T ss_pred HHHhccccceeecCCCccchhHHHHHHHcCCCCHHHHHHHHHHHHhhccccCcccCCCCEEEEEeccCCccCCCCceeEE
Confidence 333321 111111 0000 1 2444444333 34443332 46
Q ss_pred EeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCC---cchHHHHHHHHHHHHhcc
Q 010957 428 RLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFA---DDELYDMGEMLSKMVSTM 485 (496)
Q Consensus 428 ~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~---~~ef~e~~e~l~~l~~~Y 485 (496)
.|+|+|+|..+|+++.++|++|+.||+++ |||+++||| ++||+||++.|++|+++|
T Consensus 373 ~lsNst~I~~~f~~i~~kf~~mf~krAfl--H~Y~~eGme~~~e~eF~ea~~~l~~li~~Y 431 (431)
T cd02188 373 MLANHTSIASLFERILKQFDKLRKRRAFL--DNYRKEDMFSDNLDEFDESREVVQSLIEEY 431 (431)
T ss_pred EecCChHHHHHHHHHHHHHHHHHhhCchh--hhccCcCccccchhHHHHHHHHHHHHHHhC
Confidence 79999999999999999999999999987 999999999 999999999999999998
No 8
>PTZ00387 epsilon tubulin; Provisional
Probab=100.00 E-value=3.9e-70 Score=576.73 Aligned_cols=372 Identities=19% Similarity=0.248 Sum_probs=303.2
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcC-CCCCCCCCccccccCCccceeeecc-c--cCCCccccceeeeEeccCCC-
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLG-LASDPNNDPVFRNQCLNMDVLYRTG-E--TQQGVLTYTPRLLSVGFQGS- 75 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~-~~~~~~~~~~~~~~~~~~~v~fr~~-~--t~~g~~ty~PR~l~vDl~~~- 75 (496)
||||||||+||||||||..||++++.||+ +++++.. ...+++||++. + +..|..+|+||+|+||+|++
T Consensus 1 m~EiI~iqvGQCGnQIG~~fW~~l~~Eh~~i~~~g~~-------~~~~~~fF~~~~~~~~~~~~~~~~pRav~vD~Ep~v 73 (465)
T PTZ00387 1 PREIVTVQVGQCGNQLGHRFWDVALKEHKKINANPQY-------DDARDSFFENVSENVNRPGKENLKARAVLVDMEEGV 73 (465)
T ss_pred CCcEEEEEcCchHHHHHHHHHHHHHHHhCccCCCCcc-------cccccceecccccccccCCCccccCcccccCCCccH
Confidence 99999999999999999999999999999 6666543 23678999732 2 23442359999999999999
Q ss_pred cccccccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhccc
Q 010957 76 LGSMSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLD 155 (496)
Q Consensus 76 ~~~l~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~ 155 (496)
++++++ ++ ++++|++++ ++.+++|+|||
T Consensus 74 i~~i~~---------------------------~~------~~~~f~~~~----~i~~~~GaGNn--------------- 101 (465)
T PTZ00387 74 LNQILK---------------------------SP------LGDLFDENF----FVSDVSGAGNN--------------- 101 (465)
T ss_pred HHHhhc---------------------------CC------cccccCccc----ccccCCCCCCC---------------
Confidence 888865 34 577899888 99999999999
Q ss_pred ccceeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-h
Q 010957 156 NHVEFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-S 234 (496)
Q Consensus 156 ~~v~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-s 234 (496)
| ++|| |..|.+. .|+++|+||+++|+||+||||+++|+++||| |
T Consensus 102 -----w---a~G~---------------------~~~g~~~------~d~~~d~Ir~~~E~cD~l~gf~i~~slgGGTGS 146 (465)
T PTZ00387 102 -----W---AVGH---------------------MEYGDKY------IDSISESVRRQVEQCDSLQSFFLMHSLGGGTGS 146 (465)
T ss_pred -----c---CCCc---------------------ccccHHH------HHHHHHHHHHHHHhccCcceEEEEeecCCCcch
Confidence 9 9997 8889888 9999999999999999999999999999999 9
Q ss_pred hhHHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCC
Q 010957 235 AVAADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIE 314 (496)
Q Consensus 235 Gl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~ 314 (496)
|+|+.++|.|+||||++.+++++|+|+. ..+++++|||++|+|++|.+++|+++|++|++|.+ +|.+.+.++
T Consensus 147 Glgs~lle~l~d~y~~~~~~~~~V~P~~-------~~~~vv~pYN~~lsl~~l~e~~d~~i~~dN~aL~~-i~~~~~~~~ 218 (465)
T PTZ00387 147 GLGTRILGMLEDEFPHVFRFCPVVFPSA-------VDDVITSPYNSFFALRELIEHADCVLPLDNDALAN-IADSALSRK 218 (465)
T ss_pred hHHHHHHHHHHHhcccCceeeeEecCCC-------CCcceeccchhHHHHHHHHhhCCeEEEeehHHHHH-HHHhhcCcc
Confidence 9999999999999999999999999975 46788999999999999999999999999999998 887776665
Q ss_pred C---------------------------CChhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccc
Q 010957 315 N---------------------------EKPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQA 367 (496)
Q Consensus 315 ~---------------------------~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~ 367 (496)
. +.+.++|.|||++|.++|.++||+ |. .++++.+++.+|+|+|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~iIa~~l~~~t~~~Rf~--g~--------~n~dl~~i~~nLvP~P 288 (465)
T PTZ00387 219 KKKLAKGNIKRGPQPHKYSVAKPTETKKLPYDKMNNIVAQLLSNLTSSMRFE--GS--------LNVDINEITTNLVPYP 288 (465)
T ss_pred ccccccccccccccccccccccccccccccHHHHHHHHHhhhccccceeecC--Cc--------cCCCHHHHHhhcCCCC
Confidence 3 789999999999999999999999 54 6789999999999999
Q ss_pred cccch-hhcCCCCCCCC-----CchhhhHHHHHhc---cCCCCcCCcC---------------------------CCccc
Q 010957 368 RQNTV-AILDAAMPAPA-----LNGKQHEQSLLGN---LQPLTPELLN---------------------------SPFVG 411 (496)
Q Consensus 368 r~~~~-~~~~~~~p~~~-----~~~~~~~~~~~~~---~~~~tp~~~~---------------------------~~~~~ 411 (496)
|.||+ ++++|..+... .+-.++...++.. +....|.... ..|+.
T Consensus 289 ~lhFl~~s~~P~~~~~~~~~~~~s~~~l~~~l~~~~~~m~~~~~~~~k~la~~~~~RG~~~~~~v~~~~~~lk~~~~f~~ 368 (465)
T PTZ00387 289 RLHFLTSSIAPLVSLKDVAVGPRRLDQMFKDCLDPDHQMVAATPEAGKYLATALIVRGPQNVSDVTRNILRLKEQLNMIY 368 (465)
T ss_pred CceeeccccCcccchhhcccccCCHHHHHHHHhcccCeeeecCCCcchHHHHHHHHcCCCChHHHHHHHHHHhccccccc
Confidence 99984 33333322111 1122333333321 1000110000 12333
Q ss_pred CCCCCc-cceeccCc------eeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhc
Q 010957 412 SSPRGS-LEVHSIPM------AVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVST 484 (496)
Q Consensus 412 ~~~~~~-~~~~sip~------~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~ 484 (496)
|-|.+. ..+|..|+ ++.|+|+|+|..+|++++++|++|+.||+++ |||+ +|||++||+|+++.|++|+++
T Consensus 369 W~p~~~~~~~~~~~~~~~~~s~~~lsNst~I~~~f~~i~~~f~~mf~rkAfl--H~Y~-egmee~eF~ea~~~l~~li~~ 445 (465)
T PTZ00387 369 WNEDGFKTGLCNVSPLGQPYSLLCLANNCCIRNKFESMLERFNKLYKRKSHV--HHYT-EYLEQAYFDETLETIQNLIDD 445 (465)
T ss_pred cCCCceEEEeeccCCCCCceeEEEecCChHHHHHHHHHHHHHHHHHhhcchH--Hhhh-cccchHHHHHHHHHHHHHHHH
Confidence 334333 45566653 5779999999999999999999999999987 9999 899999999999999999999
Q ss_pred ccC
Q 010957 485 MKP 487 (496)
Q Consensus 485 Y~~ 487 (496)
|++
T Consensus 446 Y~~ 448 (465)
T PTZ00387 446 YAY 448 (465)
T ss_pred HHH
Confidence 985
No 9
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=100.00 E-value=6e-70 Score=574.00 Aligned_cols=376 Identities=19% Similarity=0.273 Sum_probs=306.5
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCcccc--ccCCccceeeeccccCCCccccceeeeEeccCCC-ccc
Q 010957 2 REIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFR--NQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGS 78 (496)
Q Consensus 2 rEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~--~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~ 78 (496)
|||||||+||||||||..||++++.||++++++....... ......++||+ |+.+| +|+||+|+||++++ +..
T Consensus 1 ~EiI~i~iGqcGnqiG~~~w~~l~~Eh~~~~~g~~~~~~~~~~~~~~~~~ff~--e~~~~--~~~pRav~iD~e~~~i~~ 76 (434)
T cd02186 1 REVISIHIGQAGIQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFS--ETGSG--KHVPRAVFIDLEPTVIDE 76 (434)
T ss_pred CceEEEeCCchHhHHHHHHHHHHHHHhCcCCCCCccCCccccccccccceEEE--ECCCC--cCcccccccCCcHHHHHh
Confidence 7999999999999999999999999999988775422111 11236789997 55666 89999999999999 888
Q ss_pred ccccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccc
Q 010957 79 MSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHV 158 (496)
Q Consensus 79 l~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v 158 (496)
++. ++ .+.||++++ ++.+++|+|||
T Consensus 77 i~~---------------------------~~------~~~l~~~~~----~~~~~~g~gnn------------------ 101 (434)
T cd02186 77 VRT---------------------------GT------YRQLFHPEQ----LISGKEDAANN------------------ 101 (434)
T ss_pred hcc---------------------------Cc------cccccCccc----eeecCCCCCcc------------------
Confidence 865 23 567888887 88899999999
Q ss_pred eeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhH
Q 010957 159 EFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVA 237 (496)
Q Consensus 159 ~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~ 237 (496)
| ++|| |+.|.++ .|+++|+||+++|+||++|||+++|+++||| ||+|
T Consensus 102 --w---a~Gy---------------------~~~G~~~------~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGTGSGlg 149 (434)
T cd02186 102 --F---ARGH---------------------YTIGKEI------IDLVLDRIRKLADNCTGLQGFLIFHSFGGGTGSGFG 149 (434)
T ss_pred --c---cccc---------------------chhHHHH------HHHHHHHHHHHHhcCCCcceeEEEeccCCCcchhHH
Confidence 9 9997 8899998 9999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCC
Q 010957 238 ADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEK 317 (496)
Q Consensus 238 s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~ 317 (496)
+.++|+|+||||++++++++|+|+. ...++++++||++|+|++|.+++|++++++|++|.+ +|.+.+.++.++
T Consensus 150 s~l~e~l~d~y~~~~~~~~~v~P~~------~~~~~~v~~YN~~lsl~~l~e~~d~~~~~dN~al~~-~~~~~~~~~~~~ 222 (434)
T cd02186 150 SLLLERLSVDYGKKSKLEFTVYPSP------QVSTAVVEPYNSVLTTHSLLEHSDCSFMVDNEAIYD-ICRRNLDIERPT 222 (434)
T ss_pred HHHHHHHHHhcCccceeeEEEeCCC------CCCCCeeeehHHHHhHHHHHhhCCeeeeeccHHHHH-HHHhhcCCCCCC
Confidence 9999999999999999999999986 456789999999999999999999999999999999 888889999999
Q ss_pred hhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCC-----CchhhhHH
Q 010957 318 PYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPA-----LNGKQHEQ 391 (496)
Q Consensus 318 ~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~-----~~~~~~~~ 391 (496)
+.++|++||++|+++|+++||+ |. .+++|++++.+|+|+||.||+ +++.|.++... .+-.++..
T Consensus 223 ~~~lN~iIa~~l~~~t~~~rf~--g~--------~~~~l~~l~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~ 292 (434)
T cd02186 223 YTNLNRLIAQVVSSITASLRFD--GA--------LNVDLNEFQTNLVPYPRIHFPLVSYAPIISAEKAYHEQLSVAEITN 292 (434)
T ss_pred HHHHHHHHHHHhhccccceecC--Cc--------cCCCHHHHHhhccccccceeeccccCcccchhhccccCCCHHHHHH
Confidence 9999999999999999999998 44 568999999999999999984 33333333211 11223333
Q ss_pred HHHhc---cCCCCcCCcC-----------------------------CCcccCCCCCc-cceeccC--------------
Q 010957 392 SLLGN---LQPLTPELLN-----------------------------SPFVGSSPRGS-LEVHSIP-------------- 424 (496)
Q Consensus 392 ~~~~~---~~~~tp~~~~-----------------------------~~~~~~~~~~~-~~~~sip-------------- 424 (496)
.++.. +....|.... ..|+.|-|.+. ..++..|
T Consensus 293 ~l~~~~~~m~~~~~~~~~~la~~~~~RG~~~~~~v~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (434)
T cd02186 293 ACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQR 372 (434)
T ss_pred HHhCccceeeecCCcchhHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCcCcccCCCcEeeeecCCCCccCCCccccccce
Confidence 33211 1000100000 12333333322 3444432
Q ss_pred ceeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccC
Q 010957 425 MAVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 425 ~~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
.++.|+|+|+|..+|++++++|++|+.||+++ |||+++|||++||.||++.|++|+++|++
T Consensus 373 s~~~l~Nst~i~~~f~~i~~~f~~mf~rkAfl--h~Y~~~Gmee~ef~ea~~~l~~li~~Y~~ 433 (434)
T cd02186 373 AVCMLSNTTAIAEAWSRLDHKFDLMYSKRAFV--HWYVGEGMEEGEFSEAREDLAALEKDYEE 433 (434)
T ss_pred EEEEecCchHHHHHHHHHHHHHHHHHhhcchh--hhhcCcCCchHHHHHHHHHHHHHHHHHhh
Confidence 25679999999999999999999999899887 99999999999999999999999999985
No 10
>PLN00220 tubulin beta chain; Provisional
Probab=100.00 E-value=1.1e-69 Score=574.41 Aligned_cols=377 Identities=20% Similarity=0.279 Sum_probs=308.8
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-cccc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSM 79 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l 79 (496)
||||||||+||||||||..||++++.||++.+++..+..........++||+ ++.+| +|+||+|+||++++ ++.+
T Consensus 1 m~Eii~i~iGqcGnqiG~~~w~~l~~eh~~~~~g~~~~~~~~~~~~~~~~f~--e~~~~--~~~pRav~iD~e~~~i~~i 76 (447)
T PLN00220 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGTYHGDSDLQLERINVYYN--EASGG--RYVPRAVLMDLEPGTMDSV 76 (447)
T ss_pred CCceEEEecCccHhHHHHHHHHHHHHHhCCCCCCCcCCCcccccccccceec--cCCCC--cccceeEecCCcHHHHHHH
Confidence 9999999999999999999999999999998776542211111135678996 55666 89999999999999 8777
Q ss_pred cccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccce
Q 010957 80 SSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVE 159 (496)
Q Consensus 80 ~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~ 159 (496)
++ ++ ++.||++++ ++.+++|+|||
T Consensus 77 ~~---------------------------~~------~~~~~~~~~----~~~~~~gagnn------------------- 100 (447)
T PLN00220 77 RS---------------------------GP------YGQIFRPDN----FVFGQSGAGNN------------------- 100 (447)
T ss_pred hc---------------------------Cc------cccccCccc----eEecccCCCCc-------------------
Confidence 54 23 567888887 88999999999
Q ss_pred eeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHH
Q 010957 160 FWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAA 238 (496)
Q Consensus 160 ~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s 238 (496)
| ++|| |+.|.++ .|.++|+||+++|+||+||||+++|+++||| ||+|+
T Consensus 101 -w---a~G~---------------------~~~g~~~------~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGTGSG~gs 149 (447)
T PLN00220 101 -W---AKGH---------------------YTEGAEL------IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGT 149 (447)
T ss_pred -c---Ccee---------------------ecccHHH------HHHHHHHHHHHHHhCcCcCceEEEEecCCCccccHHH
Confidence 9 9997 8899999 9999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCCh
Q 010957 239 DLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKP 318 (496)
Q Consensus 239 ~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~ 318 (496)
.++|+|+||||++.+++++|+|++ ...++++++||++|+|++|.+++|++++++|++|++ +|.+.+.++.+++
T Consensus 150 ~l~~~l~~~y~~~~~~~~~v~P~~------~~~~~~v~~yN~~lsl~~l~~~~d~~i~~dN~aL~~-i~~~~~~i~~~sf 222 (447)
T PLN00220 150 LLISKIREEYPDRMMLTFSVFPSP------KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD-ICFRTLKLTTPSF 222 (447)
T ss_pred HHHHHHHHhccccceeeeEEECCC------cCCCCccchhHHHHhHHHHHhcCCceEEeehHHHHH-HHHHhhcCCCCCh
Confidence 999999999999999999999987 467889999999999999999999999999999999 8989899999999
Q ss_pred hhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCCC-----chhhhHHH
Q 010957 319 YHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPAL-----NGKQHEQS 392 (496)
Q Consensus 319 ~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~~-----~~~~~~~~ 392 (496)
.++|.+||++|.++|+++||+ |. .+.++.+++.+|+|+|+.||+ +.++|.++.... +-.++...
T Consensus 223 ~~~N~lIa~~is~it~slRFp--G~--------ln~~l~~l~~nLVP~P~l~Fl~~s~~P~~~~~~~~~~~~t~~~l~~~ 292 (447)
T PLN00220 223 GDLNHLISATMSGVTCCLRFP--GQ--------LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292 (447)
T ss_pred HHHHhHhhccccccchhhccC--Cc--------CCccHHHHHHHhCCccceeEeecccCcccccccccccccCHHHHHHH
Confidence 999999999999999999999 54 568899999999999999984 333333322111 11122222
Q ss_pred HHh---ccCCCCcCCcC-----------------------------CCcccCCCCCc-cceeccCc------eeEeeccc
Q 010957 393 LLG---NLQPLTPELLN-----------------------------SPFVGSSPRGS-LEVHSIPM------AVRLRSSS 433 (496)
Q Consensus 393 ~~~---~~~~~tp~~~~-----------------------------~~~~~~~~~~~-~~~~sip~------~~~L~n~t 433 (496)
+.. .+....|.... ..|+.|-|.+. ..+|..|+ ++.|+|+|
T Consensus 293 l~~~~n~l~~~~~~~gk~la~~~~~RG~~~~~ev~~~~~~l~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~s~~~l~N~t 372 (447)
T PLN00220 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNST 372 (447)
T ss_pred HHhhhhcccccCCCCchhHHHHHHHcCCCCHHHHHHHHHHHHhhCCCccccccCCCEEEeecCCCCCCcceeeEEecCch
Confidence 221 11111111000 02333333333 45555543 57799999
Q ss_pred chHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccC
Q 010957 434 AILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 434 ~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
+|..+|+++.++|++|+.||+++ |||+++|||++||.||++.|++|+++|++
T Consensus 373 ~i~~~~~~i~~~f~~m~~rkAfl--h~Y~~~Gmee~ef~ea~~~l~~li~~Y~~ 424 (447)
T PLN00220 373 SIQEMFRRVSEQFTAMFRRKAFL--HWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 (447)
T ss_pred HHHHHHHHHHHHHHHHHhcCcch--hhhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 99999999999999999999999999964
No 11
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=100.00 E-value=2.5e-69 Score=568.35 Aligned_cols=376 Identities=21% Similarity=0.298 Sum_probs=305.7
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-ccccc
Q 010957 2 REIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMS 80 (496)
Q Consensus 2 rEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l~ 80 (496)
||||+||+||||||||.+||++++.||++.+++.............++||+ ++.+| +|+||+|+||++++ +..++
T Consensus 1 ~eii~i~vGqcGnqiG~~~w~~l~~eh~~~~~g~~~~~~~~~~~~~~~fF~--e~~~~--~~~pRav~iD~e~~~i~~i~ 76 (425)
T cd02187 1 REIVHIQAGQCGNQIGAKFWEVISDEHGLDPTGTYKGDSDLQLERINVYFN--EASGG--KYVPRAILVDLEPGTMDSVR 76 (425)
T ss_pred CceEEEeCCccHhHHHHHHHHHHHHHcCCCCCCCccCCccccccccceeEE--ecCCC--ceeeeeeeccCChhhhhhhh
Confidence 799999999999999999999999999998776532211111135678997 45566 99999999999998 88775
Q ss_pred ccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhccccccee
Q 010957 81 SRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVEF 160 (496)
Q Consensus 81 ~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~~ 160 (496)
. .+ .+.||++++ ++.|++|+|||
T Consensus 77 ~---------------------------~~------~~~l~~~~~----~~~~~~gagnn-------------------- 99 (425)
T cd02187 77 S---------------------------GP------FGQLFRPDN----FVFGQSGAGNN-------------------- 99 (425)
T ss_pred c---------------------------Cc------ccceecCcc----eeeccCCCCCc--------------------
Confidence 4 23 456788887 88899999999
Q ss_pred eeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHH
Q 010957 161 WTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAAD 239 (496)
Q Consensus 161 WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~ 239 (496)
| ++|+ |+.|.++ .|+++|+||+++|+||++|||+++|+++||| ||+|+.
T Consensus 100 w---a~G~---------------------~~~G~~~------~e~i~d~ir~~~E~cD~l~gf~~~~sl~GGTGSG~gs~ 149 (425)
T cd02187 100 W---AKGH---------------------YTEGAEL------IDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 149 (425)
T ss_pred c---Cccc---------------------hhhcHHH------HHHHHHHHHHhhccCCCcceEEEEeecCCCccccHHHH
Confidence 9 9997 8889998 8999999999999999999999999999999 999999
Q ss_pred HHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChh
Q 010957 240 LLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPY 319 (496)
Q Consensus 240 lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~ 319 (496)
++|+|+|||||+.+++++|+|+. ...++++++||++|+|++|.+++|++++++|++|.+ +|...+++..+++.
T Consensus 150 l~e~l~d~y~~~~~~~~~V~P~~------~~~~~~v~~YN~~lsl~~l~~~~d~~i~~dN~al~~-i~~~~~~~~~~~~~ 222 (425)
T cd02187 150 LISKIREEYPDRIMATFSVFPSP------KVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYD-ICFRTLKLTNPTYG 222 (425)
T ss_pred HHHHHHHhcCCcceEEEEEecCC------CcCcceeeehHHHHHHHHHHhcCCeEEEeecHHHHH-HHHHhcCCCCCCHH
Confidence 99999999999999999999987 445789999999999999999999999999999999 89888889999999
Q ss_pred hHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCC-----CchhhhHHHH
Q 010957 320 HCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPA-----LNGKQHEQSL 393 (496)
Q Consensus 320 ~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~-----~~~~~~~~~~ 393 (496)
++|++||++|+++|+++||+ |. .+.+|.+++.+|+|+|+.||+ ++..|.++... .+-.++...+
T Consensus 223 ~~N~~ia~~is~~t~s~Rfp--g~--------~n~dl~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l 292 (425)
T cd02187 223 DLNHLVSAVMSGITTCLRFP--GQ--------LNSDLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQM 292 (425)
T ss_pred HHHHHHhccccccceeeecC--Cc--------cccCHHHHHHhcCCCCCceecccccCccccccccccccCCHHHHHHHH
Confidence 99999999999999999999 54 578999999999999999984 33333333211 1112222222
Q ss_pred Hh---ccCCCCcCCcC-----------------------------CCcccCCCCCc-cceeccCc------eeEeecccc
Q 010957 394 LG---NLQPLTPELLN-----------------------------SPFVGSSPRGS-LEVHSIPM------AVRLRSSSA 434 (496)
Q Consensus 394 ~~---~~~~~tp~~~~-----------------------------~~~~~~~~~~~-~~~~sip~------~~~L~n~t~ 434 (496)
.. .+....|.... ..|+.|-|.+. ..+|..|+ ++.|+|+|+
T Consensus 293 ~~~~~~~~~~~~~~~~~la~~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~~~~~~s~~~l~N~t~ 372 (425)
T cd02187 293 FDAKNMMAACDPRHGRYLTAAAIFRGRVSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTA 372 (425)
T ss_pred hCccCeeeccCCCcchHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCcCCCcCCCCEeeeecCCCCCCcceeEEEecCCcH
Confidence 21 01011111000 12333333322 34554443 567999999
Q ss_pred hHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccC
Q 010957 435 ILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 435 i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
|..+|+++.++|++|+.||+++ |||+++|||++||.||++.|++|+++|++
T Consensus 373 i~~~~~~i~~~f~~m~~kkAfl--h~Y~~~G~ee~ef~Ea~~~l~~li~~Y~~ 423 (425)
T cd02187 373 IQELFKRISEQFTAMFRRKAFL--HWYTGEGMDEMEFTEAESNMNDLVSEYQQ 423 (425)
T ss_pred HHHHHHHHHHHHHHHHhcCcch--hhhhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999987 99999999999999999999999999985
No 12
>KOG1374 consensus Gamma tubulin [Cytoskeleton]
Probab=100.00 E-value=1e-68 Score=527.72 Aligned_cols=376 Identities=20% Similarity=0.327 Sum_probs=307.2
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-cccc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSM 79 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l 79 (496)
||||||||+||||||||..||..+|.||++.++|...........+.+|||+ +..++ .|+||||++||||. |+.+
T Consensus 2 ~~eIiTlQ~GQCGNQiG~efwk~L~~Ehgis~~g~l~d~~~~~~drKdvFFy--qadd~--~yipRAvLvDlEPrVIn~~ 77 (448)
T KOG1374|consen 2 PREIITLQLGQCGNQIGFEFWKQLCLEHGISPDGILEDFATEGADRKDVFFY--QADDN--HYIPRAVLVDLEPRVINQI 77 (448)
T ss_pred CceeEEEeccccccHHHHHHHHHHHHhcCCCcCCcccchhhhCcccccccee--eccCC--ccccceeeeccchHHHhcc
Confidence 6899999999999999999999999999999988743222234467899998 44666 89999999999999 7766
Q ss_pred cccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccc--cCCCCCCCcchhccccchhhccccc
Q 010957 80 SSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMIN--GTSSGKSDSQREIQDKDIVEFLDNH 157 (496)
Q Consensus 80 ~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~--~~~~~~nn~~~~~~~~~~~~~l~~~ 157 (496)
.. .+ +..||++++ +.. ...|+|||
T Consensus 78 ~~---------------------------~~------~s~l~n~en----i~~s~~ggGAGNN----------------- 103 (448)
T KOG1374|consen 78 LS---------------------------SP------YSGLYNPEN----IFLSDHGGGAGNN----------------- 103 (448)
T ss_pred cc---------------------------ch------hhcccCccc----eEEecCCCCcccc-----------------
Confidence 54 34 678888887 433 34577889
Q ss_pred ceeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhh
Q 010957 158 VEFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAV 236 (496)
Q Consensus 158 v~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl 236 (496)
| +.| |.+|..+ .|+++|.|+|++|.||+|.||+++||++||| ||+
T Consensus 104 ---W---A~G----------------------Y~~G~~~------~e~ImdiIdrEad~~DsleGF~l~hSiAGGTGSGl 149 (448)
T KOG1374|consen 104 ---W---ASG----------------------YSQGERV------QEDIMDIIDREADGSDSLEGFVLCHSIAGGTGSGL 149 (448)
T ss_pred ---c---ccc----------------------cccchhh------HHHHHHHHHHhhcCCCcccceeEEEeecCCCCcch
Confidence 9 998 8999999 9999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCC
Q 010957 237 AADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENE 316 (496)
Q Consensus 237 ~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~ 316 (496)
||.+||+|.|+||||.+.+|+|+|... ..+++||+|||++|+|++|.+++|+++.++|.+|.+ +|...++++.|
T Consensus 150 GS~llErL~drypkkliqtysVfPn~d-----~ssdVVVQpYNsiLtL~rL~~nsD~vVVlDN~AL~r-ia~~~l~i~~p 223 (448)
T KOG1374|consen 150 GSFLLERLNDRYPKKLVQTYSVFPNQD-----ESSDVVVQPYNSILTLKRLTENSDCVVVLDNTALHR-IAADRLHIQNP 223 (448)
T ss_pred HHHHHHHHHHhchhhhheeeeeccCCC-----CccceEEecchHHHHHHHHhhCCCeEEEeccHHHHH-HHHHHhcCCCC
Confidence 999999999999999999999999762 578999999999999999999999999999999999 99999999999
Q ss_pred ChhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccchhhcCCCCCCCCCchh---------
Q 010957 317 KPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALNGK--------- 387 (496)
Q Consensus 317 ~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~~~--------- 387 (496)
++.|+|+|||.+|++.|.|+||+ +. .+.+|..+...|+|.|+.|| ..+..+|+......
T Consensus 224 tF~~iNqLvstims~st~t~r~p--~Y--------m~n~l~~l~~~LiP~P~lhf--l~~~~tP~~sd~~~~~~~rkttv 291 (448)
T KOG1374|consen 224 TFSQINQLVSTIMSASTTTLRYP--GY--------MNNDLIGLYASLIPTPELHF--LMTGYTPLTSDNSLATAVRKTTV 291 (448)
T ss_pred CHHHHHHHHHHHHhhccccccch--hh--------ccCcHHHHHhhcCCCCCeee--eeccCCcccChhhhhhhhhcchH
Confidence 99999999999999999999999 54 56789999999999999998 34456776553211
Q ss_pred -hhHHHHHhc---c----CCCCcC--CcC---------------------------CCcccCCCCCccce-eccC-----
Q 010957 388 -QHEQSLLGN---L----QPLTPE--LLN---------------------------SPFVGSSPRGSLEV-HSIP----- 424 (496)
Q Consensus 388 -~~~~~~~~~---~----~~~tp~--~~~---------------------------~~~~~~~~~~~~~~-~sip----- 424 (496)
++...+++. + .+..+. ... ++.||.++.--.+. ...|
T Consensus 292 ldvmRrLL~pkn~mvs~~~~~~~~~~~~si~n~iqg~vdp~~v~~s~~r~~dr~~a~f~~w~~~si~val~k~spy~~~~ 371 (448)
T KOG1374|consen 292 LDVMRRLLQPKNMMVSTADDLSGNPCYISILNIIQGEVDPTQVHKSLQRIRDRKLANFIPWGPASIQVALSKKSPYVQRA 371 (448)
T ss_pred HHHHHHHhCcchhhhhccccccCCcchHhHHhhhhcccCHHHHHHHHHHHHhcccccCCCCCCHHHHhhhhcCCCccccc
Confidence 222333321 1 011111 000 23333332100000 0111
Q ss_pred ---ceeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCCcc---hHHHHHHHHHHHHhcccCC
Q 010957 425 ---MAVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADD---ELYDMGEMLSKMVSTMKPH 488 (496)
Q Consensus 425 ---~~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~---ef~e~~e~l~~l~~~Y~~~ 488 (496)
....|+|+|+|...|++++.+++||.+||+|+ +-|...||+++ ||.|++|.++.|+++|+..
T Consensus 372 ~~vSglml~N~t~i~~lfe~~~~qydklrk~~AFl--d~y~k~~if~~~~~efdesr~ivq~lv~eY~a~ 439 (448)
T KOG1374|consen 372 HRVSGLMLANSTSIVSLFERILGQYDKLRKKRAFL--DQYRKFDIFEDDLDEFDESREIVQQLVDEYHAA 439 (448)
T ss_pred cceeeeeeccchhHHHHHHHHHHHHHHHHHHHHHH--HHhhhcccccchhHHHHHHHHHHHHHHHHHHhh
Confidence 23569999999999999999999998888887 99999999999 9999999999999999853
No 13
>KOG2530 consensus Members of tubulin/FtsZ family [Cytoskeleton]
Probab=100.00 E-value=2.6e-69 Score=542.70 Aligned_cols=352 Identities=39% Similarity=0.612 Sum_probs=295.4
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCcc-ceeeeccccCCCccccceeeeEeccCCCcccc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNM-DVLYRTGETQQGVLTYTPRLLSVGFQGSLGSM 79 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~-~v~fr~~~t~~g~~ty~PR~l~vDl~~~~~~l 79 (496)
||||+|||||+++||||+||||+||+++++.++...++. ++.+ |||||.|++..|+.|||||+|+||+++.+|.+
T Consensus 1 mrEilTiq~g~~AnfvgtHfwN~Qea~l~~~~d~~~~~~----~~~~ndvlyr~g~~~~~~~tytPRl~l~Dl~g~~g~~ 76 (483)
T KOG2530|consen 1 MREILTIQVGHFANFVGTHFWNQQEAYLGLATDSEEPPG----ELCPNDVLYRTGRTDHGQITYTPRLLLVDLKGELGTL 76 (483)
T ss_pred CceEEEEEeeccccchhhhhcchhhHhhccCCcccCChh----hcCcchhhhhccccccCceeeccceeEEecCcccccc
Confidence 999999999999999999999999999999988776542 3334 99999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccce
Q 010957 80 SSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVE 159 (496)
Q Consensus 80 ~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~ 159 (496)
+..|.+|.+...+. ...|.|++++|++.|.++++|++.+...+. .+ + ..| .++++. +..+.++.+|+
T Consensus 77 ~~~~~~~~~~~~~~--~~~~~g~~t~~~~~pr~~~~~~qs~~~~~~----~l-~---~~~--~~~i~~-e~~~~~~~sv~ 143 (483)
T KOG2530|consen 77 KYQGELYNDSHLGN--EDAWKGKLTTIKTEPRDRNPELQSLLSAEA----EL-P---ELN--AEEIEY-ESDYSLLASVP 143 (483)
T ss_pred ccchhhccchhccc--ccccccccceeccccccCChHHhhhccccC----cc-c---ccc--hhhhcc-ccccccccccc
Confidence 88888887654332 368999999999999999999999987654 11 1 111 112222 34567889999
Q ss_pred eeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCchhhHHH
Q 010957 160 FWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGFSAVAAD 239 (496)
Q Consensus 160 ~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~sGl~s~ 239 (496)
+|+||+|.||||||++.|++++++...|+.|++|.++|++.++.+++.|+||+++||||.|||||++.|+++||||||++
T Consensus 144 ~WsDFlr~~yHp~tl~~l~~~~~d~~a~~~y~iG~d~f~E~s~~eE~~DrLr~~VEECD~lQGFq~l~Did~GfgG~as~ 223 (483)
T KOG2530|consen 144 SWSDFLRNHYHPRTLNPLNGLFQDSGAFDRYSIGYDVFTENSYQEEFCDRLRFYVEECDTLQGFQLLSDIDDGFGGFASK 223 (483)
T ss_pred hHHHHHHhhcCccccccCCccccChHHhhccccchhhhhccchhHHHHHHHHHHHHhcccccceEEEEecCCCchhHHHH
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcceeEEEecCCCc-cccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCCh
Q 010957 240 LLENIADEYANTPVLLFAVRSPSS-QMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKP 318 (496)
Q Consensus 240 lle~L~dEypk~~i~~~~v~p~~~-~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~ 318 (496)
+||.|+|||+++++++|+..|.+. ...+.++...-...+|.+|++++|.++|++++||....... +.
T Consensus 224 ~le~l~DEys~~~v~tw~~~~~p~s~~~s~k~ls~~~~~lN~als~~qLs~~~~l~~PL~~~~~~~------------~~ 291 (483)
T KOG2530|consen 224 LLEELQDEYSKKAVFTWGHNPRPFSQDFSMKRLSNKWLKLNKALSLSQLSQECSLYFPLSTASGLG------------DL 291 (483)
T ss_pred HHHHHHHhhcCCceeccccCCCCCCcchhhhhhHHHHHHHHHHHHHHHHhhhcceeeccccccccc------------cH
Confidence 999999999999999999988432 22222222333348999999999999999999999754311 57
Q ss_pred hhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccchhhcCCCCCCCCCchhhhHHHHHhc
Q 010957 319 YHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPALNGKQHEQSLLGN 396 (496)
Q Consensus 319 ~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 396 (496)
|+++|++|.+++++|+|+|..++ ++-.++..|++..++ +..+..++|++...++++.+.+++.
T Consensus 292 ~~tsA~~a~~~ds~tlptr~~ss-------------S~~~~~d~ls~l~~~--~~~~g~alpf~~~~Gq~l~dtL~ss 354 (483)
T KOG2530|consen 292 WETSAKLARAFDSITLPTRLISS-------------SNLRQRDTLSYLGSK--VITLGYALPFPLVTGQSLEDTLVSS 354 (483)
T ss_pred HHHHHHHHhhcccccccceecch-------------hHHHHHHHHHHHHHH--HHHhhhccCCCccccccchHHHHhc
Confidence 99999999999999999999842 455666777777665 6677788999998888888777653
No 14
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=100.00 E-value=3.7e-65 Score=539.31 Aligned_cols=378 Identities=19% Similarity=0.223 Sum_probs=300.9
Q ss_pred EEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-ccccccc
Q 010957 4 IVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMSSR 82 (496)
Q Consensus 4 IItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l~~~ 82 (496)
|||||+||||||||..||++++.||++.+++... ......++||. ++.+| +|+||+|+||+|++ ++++++.
T Consensus 2 iItiqvGQCGNQIG~~fw~~l~~Eh~~~~~g~~~----~~~~~~~~ff~--e~~~~--~~~pRav~iD~ep~vi~~i~~~ 73 (446)
T cd02189 2 VVTVQLGQCGNQLGHELFDTLAKEASSSDDEGYK----YERDAQERFFS--EKSDG--QPIARSVLVDMEPKVIESTLSK 73 (446)
T ss_pred eEEEEcCcchhHHHHHHHHHHHHHhCCCCCCCcc----ccccccceeec--ccCCC--CcCCceeecCCCchHHHHhhcC
Confidence 8999999999999999999999999998766432 11235689995 55666 89999999999999 8888651
Q ss_pred ccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccceeee
Q 010957 83 GLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVEFWT 162 (496)
Q Consensus 83 g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~~Ws 162 (496)
+.. .+.+|++++ ++.+++|+||| |
T Consensus 74 ---------------------------~~~----~~~~f~~~~----~~~~~~gagnn--------------------w- 97 (446)
T cd02189 74 ---------------------------SSG----GTWKYDKKN----VICQQSGSGNN--------------------W- 97 (446)
T ss_pred ---------------------------CCC----cccccCchh----eeecCCCCccc--------------------h-
Confidence 100 234677777 88899999999 9
Q ss_pred ccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHH
Q 010957 163 DFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLL 241 (496)
Q Consensus 163 Df~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~ll 241 (496)
++|| |+.|.++ .|+++|+||+++|+||++|||+++|+++||| ||+|+.++
T Consensus 98 --a~Gy---------------------~~~g~~~------~~~~~d~ir~~~E~cd~~~gf~~~~sl~GGtGSG~gs~l~ 148 (446)
T cd02189 98 --AYGY---------------------YVHGPQI------KEDILDLIRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVT 148 (446)
T ss_pred --hccc---------------------cccchhh------HHHHHHHHHHHHHhCCCccceEEEecCCCCcchHHHHHHH
Confidence 9997 8889999 9999999999999999999999999999999 99999999
Q ss_pred HHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhhH
Q 010957 242 ENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHC 321 (496)
Q Consensus 242 e~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~ 321 (496)
|+|+||||++.+++++|+|+. .+++++++||++|+|++|.+++|++++++|++|.+ +|.+.++++.+++.++
T Consensus 149 e~l~d~y~~~~~~~~~v~P~~-------~~~~~v~~yN~~lsl~~l~e~~d~~~~~dN~al~~-~~~~~~~~~~~~~~~~ 220 (446)
T cd02189 149 ELLRDEYPESLLLNIVVWPYT-------TGEVIVQNYNTVLTLAHLYESSDAIILLENDDIHR-ICSKLRNLKNVSLSDI 220 (446)
T ss_pred HHHHHhcCccceeeeeccCCC-------CCcchhhhhhHHhhHHHHHhhCCeEEEecHHHHHH-HHHHhcCCCCCCHHHH
Confidence 999999999999999999964 46789999999999999999999999999999999 8988899999999999
Q ss_pred HHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCCC-----chhhhHHHHHh
Q 010957 322 SAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPAL-----NGKQHEQSLLG 395 (496)
Q Consensus 322 n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~~-----~~~~~~~~~~~ 395 (496)
|++||++|+++|+|.|+.+... ..+....+.+|++++.+|+|+||.||+ ++..|.+|.... +-.+++..+.+
T Consensus 221 N~~Ia~~l~~~~~~~r~~~~~~--~~~~~~~~~~l~~l~~nLvP~P~~~fl~~s~~P~~~~~~~~~~~~~~~~l~~~l~q 298 (446)
T cd02189 221 NKVIAHQLASLLQPSLDSTGSN--GALAGRSTNPLNDLVEDLCPHPAYKLLTIRSLPQMPEKSLAFSTFSWSALLKRLHQ 298 (446)
T ss_pred HHHHHHHHHHHhhHhhccCccc--ccccccccCCHHHHHhhCcCCCCceeeecccCCcccccccccccCCHHHHHHHHHH
Confidence 9999999999999999853110 001112468899999999999999983 344444442211 22233333322
Q ss_pred ccCCC-------------------------CcCCcC------------------------CCcccCCCCCc-cceeccCc
Q 010957 396 NLQPL-------------------------TPELLN------------------------SPFVGSSPRGS-LEVHSIPM 425 (496)
Q Consensus 396 ~~~~~-------------------------tp~~~~------------------------~~~~~~~~~~~-~~~~sip~ 425 (496)
.+.+. .|.... ..++.|-|... ..+++.++
T Consensus 299 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~~~~~~f~~W~p~~~~~~~~~~~~ 378 (446)
T cd02189 299 MLIAGSFMEEGIDWTVRPEGSAASLLSGNKSTHFNKSLANLLILRGKDVTSADERKFRDPLLYVNWSPSPVRFSISSHKR 378 (446)
T ss_pred hhccccccccccccccccccccccccccccCCcccceeeeeeeeeCCCchHHHHHHHhccCcCCCcCCCCEeeeecCCCC
Confidence 11110 000000 01222323222 33433332
Q ss_pred --------eeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhccc
Q 010957 426 --------AVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMK 486 (496)
Q Consensus 426 --------~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~ 486 (496)
++.|+|+++|..+|++++++|++|+.||+++ |||+++|||++||.||++.|++|+++|+
T Consensus 379 ~~~~~~~s~~~l~Nst~i~~~l~~i~~~f~~mf~~rAfl--H~Y~~~Gmee~ef~eA~~~l~~li~~Y~ 445 (446)
T cd02189 379 SFSKYEKSVTLVSNSQTIIDPLDNILEKAWNMFASGAYL--HQYEKYGLEEEDFLDAFATLEQIIASYK 445 (446)
T ss_pred CcCCcceeEEEEeCCchHHHHHHHHHHHHHHHHhcCcch--hhhhccCCcHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999899887 9999999999999999999999999996
No 15
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=100.00 E-value=3.7e-63 Score=514.07 Aligned_cols=332 Identities=20% Similarity=0.283 Sum_probs=275.4
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-ccccc
Q 010957 2 REIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMS 80 (496)
Q Consensus 2 rEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l~ 80 (496)
||||+||+||||||||..||++++.|| |+||+|+||++++ +..++
T Consensus 1 ~Eii~i~~GqcGnqig~~~w~~~~~eh----------------------------------~~pR~v~iD~e~~~i~~i~ 46 (379)
T cd02190 1 REIIVVQVGQCGNQIGCRFWDLALREH----------------------------------LKARAVLIDMEEGVVNEIL 46 (379)
T ss_pred CceEEEecCcHHHHHHHHHHHHHHHhh----------------------------------cCCcceeccCChhHHHHHh
Confidence 799999999999999999999998865 6899999999999 88776
Q ss_pred ccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhccccccee
Q 010957 81 SRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVEF 160 (496)
Q Consensus 81 ~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~~ 160 (496)
+ ++ .+.+|++++ ++.++.|+|||
T Consensus 47 ~---------------------------~~------~~~~~~~~~----~~~~~~gaGnn-------------------- 69 (379)
T cd02190 47 K---------------------------GP------LRDLFDETQ----LVTDVSGAGNN-------------------- 69 (379)
T ss_pred c---------------------------Cc------cccccCccc----ccccCCCCCCC--------------------
Confidence 5 23 467888887 88899999999
Q ss_pred eeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHH
Q 010957 161 WTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAAD 239 (496)
Q Consensus 161 WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~ 239 (496)
| ++|+ |..|.++ .|+++|+||+++|+||+||||+++|+++||| ||+|+.
T Consensus 70 ~---a~G~---------------------~~~g~~~------~~~~~d~ir~~~E~cd~l~gf~i~~sl~GGTGSG~gs~ 119 (379)
T cd02190 70 W---AVGY---------------------HQYGHQY------IDSILEKIRKAAEKCDSLQSFFILHSLGGGTGSGLGTY 119 (379)
T ss_pred c---ccee---------------------eccchhH------HHHHHHHHHHHHhhCcCcceEEEEeecCCCcchhHHHH
Confidence 9 9997 8889888 9999999999999999999999999999999 999999
Q ss_pred HHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChh
Q 010957 240 LLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPY 319 (496)
Q Consensus 240 lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~ 319 (496)
++|.|+||||++.+++++|+|+. ..+++++|||++|+|++|.+++|++++++|++|. .+.
T Consensus 120 l~e~l~~~y~~~~~~~~~v~P~~-------~~~~~v~~yN~~lsl~~l~~~~d~~i~~~N~~l~-------------~~~ 179 (379)
T cd02190 120 VLELLADEFPEVYRFVTSVYPSA-------DDDVITSPYNSVLALRELIEHADCVLPIENQALV-------------PFD 179 (379)
T ss_pred HHHHHHHhcCccceEEEeecCCC-------CCCceecccHHHHHHHHHHHhCCeeEEeccHHHH-------------HHH
Confidence 99999999999999999999987 3677899999999999999999999999999985 588
Q ss_pred hHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCC-----CchhhhHHHH
Q 010957 320 HCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPA-----LNGKQHEQSL 393 (496)
Q Consensus 320 ~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~-----~~~~~~~~~~ 393 (496)
++|.+||++|+++|.+.||+ |. .+.+++++..+|+|+||.||+ ++..|.++... .+..++...+
T Consensus 180 ~~N~~ia~~i~~~t~~~rf~--g~--------~n~d~~~i~~nLvP~P~l~fl~~s~~P~~~~~~~~~~~~s~~~l~~~l 249 (379)
T cd02190 180 AMNSIVANLLLNLTSSMRFE--GS--------LNVDLNEITMNLVPFPRLHFLVSSLSPLYPLADVNVPPRRLDQMFSDA 249 (379)
T ss_pred HHHHHHHhhhcCccceeecc--cc--------cccchhhhccccccCCCceecccccccccchhhccccCCCHHHHHHHH
Confidence 99999999999999999998 54 678999999999999999984 23333333211 1222334444
Q ss_pred Hh---ccCCCCcCC--------------cC--------------CCcccCCCCCc-cceeccCc------eeEeecccch
Q 010957 394 LG---NLQPLTPEL--------------LN--------------SPFVGSSPRGS-LEVHSIPM------AVRLRSSSAI 435 (496)
Q Consensus 394 ~~---~~~~~tp~~--------------~~--------------~~~~~~~~~~~-~~~~sip~------~~~L~n~t~i 435 (496)
+. .+....|.. .. .+.+|. |.+. ..+|..|+ ++.|+|+|+|
T Consensus 250 ~~~~~~m~~~~~~~~kyls~~~i~RG~~~~~ei~~~~~~l~~~~~fv~W~-p~~~~~~~~~~~~~~~~~s~~~lsNsTsI 328 (379)
T cd02190 250 FSRNHQLIRADPKHGLYLACALLVRGNVSVSDLRRNIERLKPKLKFVKWN-QEGWKIGLCSVPPVGHSYSLLCLANNTCI 328 (379)
T ss_pred HccccceeecCCCcchHHHHHHHHcCCCCHHHHHHHHHHHhccCcCcCcC-CCcEEEeecccCCCCcceeEEEecCccHH
Confidence 42 111001100 00 123333 3332 34455543 5679999999
Q ss_pred HHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccC
Q 010957 436 LPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 436 ~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
..+|+++.++|++|+.||+++ |||+++|||++||+|+++.|++|+++|++
T Consensus 329 ~~~f~~i~~~f~~mf~krAfl--h~Y~~eG~ee~ef~ea~~~l~~li~~Y~~ 378 (379)
T cd02190 329 KGTFTELKERFMKLYKRKAHL--HHYTQVGMEQGDFTEALESISNLIDEYDY 378 (379)
T ss_pred HHHHHHHHHHHHHHHhcccch--hhhhCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999887 99999999999999999999999999975
No 16
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi
Probab=100.00 E-value=6.6e-59 Score=484.70 Aligned_cols=335 Identities=21% Similarity=0.301 Sum_probs=272.7
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-cccccc
Q 010957 3 EIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMSS 81 (496)
Q Consensus 3 EIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l~~ 81 (496)
|||+||+||||||||.+||+++ |+||+++. +..+..
T Consensus 1 eii~i~vGq~G~qig~~~w~~~-------------------------------------------i~iD~e~~~i~~i~~ 37 (382)
T cd06059 1 EIISIQIGQCGNQIGNKFWELL-------------------------------------------ILVDLDPRVINEILQ 37 (382)
T ss_pred CeEEEecCCcHHHHHHHHHHHH-------------------------------------------HcccCCcchhhhhhc
Confidence 8999999999999999999885 89999998 777654
Q ss_pred cccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccceee
Q 010957 82 RGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVEFW 161 (496)
Q Consensus 82 ~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~~W 161 (496)
.+ .+.+|++++ .+.++.|+||| |
T Consensus 38 ---------------------------~~------~~~~~~~~~----~~~~~~g~gnn--------------------~ 60 (382)
T cd06059 38 ---------------------------GQ------LSKLFDPNQ----LVNGKEGSGNN--------------------W 60 (382)
T ss_pred ---------------------------cc------ccccCCccc----EEecccccccc--------------------c
Confidence 22 455677777 78889999999 9
Q ss_pred eccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHH
Q 010957 162 TDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADL 240 (496)
Q Consensus 162 sDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~l 240 (496)
++|+ +..|.+. .|+++|+||+++|+||++|||+++|+++||| ||+|+.+
T Consensus 61 ---a~G~---------------------~~~g~~~------~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGTGSG~gs~l 110 (382)
T cd06059 61 ---ARGY---------------------YTIGPEL------IDEILDRIRKQVEKCDSLQGFQITHSLGGGTGSGLGSLL 110 (382)
T ss_pred ---cccc---------------------cccCHHH------HHHHHHHHHHHHHhCCCcCceEEEEecCCCcchhHHHHH
Confidence 9997 7888777 8999999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhh
Q 010957 241 LENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYH 320 (496)
Q Consensus 241 le~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~ 320 (496)
+|.|+|||||+.+++++|+|.. ...++++++||++|++++|.+++|+++|++|++|.+ +|.+.+.++.+++.+
T Consensus 111 ~e~l~d~y~~~~i~~~~v~P~~------~~~~~~v~~yN~~lsl~~L~e~sd~~i~~~N~~l~~-~~~~~~~~~~~~~~~ 183 (382)
T cd06059 111 LELLSDEYPKILINTFSIFPSP------QGSSNVVEPYNSILSLNHLLENSDSVILFDNEALYN-ILTRQLDIDEPSFDD 183 (382)
T ss_pred HHHHHHhcCccceEeEEEeccC------ccCCccccchHHHHhHHHHHhcCCeeEEeehHHHHH-HHHHhcCCCCCChHH
Confidence 9999999999999999999987 344479999999999999999999999999999998 788888888999999
Q ss_pred HHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch-hhcCCCCCCCCC-----chhhhHHHHH
Q 010957 321 CSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV-AILDAAMPAPAL-----NGKQHEQSLL 394 (496)
Q Consensus 321 ~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~-~~~~~~~p~~~~-----~~~~~~~~~~ 394 (496)
+|++||++|+++|+|+|++ |. .++++++++.+|+|+|+.||+ ++..|.++.... +-.++...++
T Consensus 184 ~N~iia~~l~~it~~~r~~--g~--------~n~d~~~i~~~LvP~p~~~fl~~s~~P~~~~~~~~~~~~~~~~~~~~l~ 253 (382)
T cd06059 184 LNNIIAQIISSITASLRFP--GY--------LNFDLRKLATNLVPFPRLHFLTPSFAPLISYDSQTTEKLNLLQIINELF 253 (382)
T ss_pred HHHHHHHhhcccccccccC--CC--------cCCCHHHHhhhcCCCCCceeccccccccccchhcccccCCHHHHHHHHh
Confidence 9999999999999999998 44 678999999999999999983 333333332111 1112222222
Q ss_pred hccCC---CCcCCcC---------------------------C-CcccCCCCCc-cceeccCc-------eeEeecccch
Q 010957 395 GNLQP---LTPELLN---------------------------S-PFVGSSPRGS-LEVHSIPM-------AVRLRSSSAI 435 (496)
Q Consensus 395 ~~~~~---~tp~~~~---------------------------~-~~~~~~~~~~-~~~~sip~-------~~~L~n~t~i 435 (496)
..-.. ..|.... . ..+|.+ .+. ..++.+|. ++.|+|+|+|
T Consensus 254 ~~~~~~~~~~~~~~~~la~~~~~RG~~~~~~v~~~~~~~~~~~~~~~w~p-~~~~~~~~~~~~~~~~~~s~~~l~Nstsi 332 (382)
T cd06059 254 NNDNSFFSCDPTKGRYLAAALIFRGDVFQSEIQEAINKLKNKLNIQSWIP-DGFKVSNCKKPPRAELGKSALFLSNSTSI 332 (382)
T ss_pred hcccceeecCCCcchHHHHHHHHhCCCCHHHHHHHHHHHHHhcccccCCC-CcEEEEecCCCCCcCcceeEEEecCchHH
Confidence 11000 0010000 0 112322 222 34444432 4679999999
Q ss_pred HHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHHhcccC
Q 010957 436 LPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMVSTMKP 487 (496)
Q Consensus 436 ~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~~~Y~~ 487 (496)
..+|+++.++|++|+.||+++ |||+++|||++||.||++.|++|+++|++
T Consensus 333 ~~~l~~i~~~f~~m~~~rAfl--h~Y~~~G~ee~ef~ea~~~l~~li~~Y~~ 382 (382)
T cd06059 333 GESLERLIEKFDKLYKRKAFL--HWYLGEGMDEMEFTEAESSLEDLIQSYQE 382 (382)
T ss_pred HHHHHHHHHHHHHHHhhCcch--hhhcCcCCchHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999987 99999999999999999999999999974
No 17
>KOG1376 consensus Alpha tubulin [Cytoskeleton]
Probab=100.00 E-value=3.5e-58 Score=451.98 Aligned_cols=366 Identities=19% Similarity=0.263 Sum_probs=302.5
Q ss_pred CeeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccc--cccCCccceeeeccccCCCccccceeeeEeccCCCccc
Q 010957 1 MREIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVF--RNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGSLGS 78 (496)
Q Consensus 1 MrEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~--~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~~~~ 78 (496)
|||||.|++||.|-|||+.+|++.+.||++.+++....+. .......+.|| .+|..| +++||+|+|||+|.+++
T Consensus 1 m~e~i~ih~gqag~qi~naCwel~clEhgi~~~g~~p~~~~~~~~~~~~~tff--~~t~~~--k~~pr~~fVDlEPtide 76 (407)
T KOG1376|consen 1 MREIISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPDDKSVGKGDDSFNTFF--SETGAG--KHVPRAVFVDLEPTIDE 76 (407)
T ss_pred CCcceeeeeccccccccchhHHHHHHHhcCccCCcCCCCccccccCcccceee--cccccc--cccceeEEEeccCccch
Confidence 9999999999999999999999999999999988753211 11112456888 477777 99999999999999888
Q ss_pred ccccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccc
Q 010957 79 MSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHV 158 (496)
Q Consensus 79 l~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v 158 (496)
++. ++ ++.||.+++ ++.|+++++||
T Consensus 77 vrt---------------------------G~------y~~lfHPeq----litGkedAann------------------ 101 (407)
T KOG1376|consen 77 VRT---------------------------GT------YRQLFHPEQ----LITGKEDAANN------------------ 101 (407)
T ss_pred hcc---------------------------cc------hhhccCchh----ccCcchHhhhh------------------
Confidence 876 45 899999998 99999999998
Q ss_pred eeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhH
Q 010957 159 EFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVA 237 (496)
Q Consensus 159 ~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~ 237 (496)
. ||+| |++|+|+ +|..+|+||+.++.|..||||.+||+.+||+ ||++
T Consensus 102 --y---Argh---------------------yt~g~e~------id~~~~~Ir~~Ad~C~glqgflvFhs~GGgtGsg~~ 149 (407)
T KOG1376|consen 102 --Y---ARGH---------------------YTIGKEI------IDLVLDRIRKLADLCTGLQGFLVFHSFGGGTGSGLG 149 (407)
T ss_pred --H---Hhhh---------------------hhcchhh------hHHHHHHHHHHHHhhccccceEEEEeccCCCcCCcc
Confidence 4 9998 9999999 9999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCC
Q 010957 238 ADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEK 317 (496)
Q Consensus 238 s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~ 317 (496)
+.++|.|..+|+||..+.|+++|.+ ..+..+++|||++|+.+...+++|+.++++|++.++ +|.+.+.+..|+
T Consensus 150 s~lmerls~~~GKkskl~fsiypap------qvSt~vvePynsiltth~tle~sD~sf~vdnea~Yd-icr~~l~i~rPt 222 (407)
T KOG1376|consen 150 SLLMERLSVDYGKKSKLEFSIYPAP------QVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYD-ICRRNLDIERPT 222 (407)
T ss_pred chhhhhhhhhhhhccccccccccCc------cccccccCCccccccceeecccCcceeecCchhhcc-hhhhccccCCcc
Confidence 9999999999999999999999998 688899999999999999999999999999999999 999999999999
Q ss_pred hhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccchhhcCCCCCCCCC-------------
Q 010957 318 PYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTVAILDAAMPAPAL------------- 384 (496)
Q Consensus 318 ~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~~~~~~~~p~~~~------------- 384 (496)
+.|+|++|+++++++|.++||. |+ .+++|.+|.++|+|+|- +. .+..+.+....
T Consensus 223 yt~lnr~i~qVvSsitaSlrf~--g~--------lnvdl~efqTnlVpypl--ya-p~~s~~~a~he~~sv~~it~~~fe 289 (407)
T KOG1376|consen 223 YTNLNRLIAQVVSSITASLRFD--GA--------LNVDLTEFQTNLVPYPL--YA-PVISAEKAYHEQLSVAEITNACFE 289 (407)
T ss_pred ccchhhhHHhhhcccccccccC--Cc--------ccccHHHHHhhCCCCcc--cc-cchhhcccchhhhhHHhhcccccc
Confidence 9999999999999999999999 55 78999999999999992 22 11122111110
Q ss_pred -----------chhhhHHHHHhccCCCCcCCcC------------CCcccCCCCCccceeccC-ceeEeecccchHHHHH
Q 010957 385 -----------NGKQHEQSLLGNLQPLTPELLN------------SPFVGSSPRGSLEVHSIP-MAVRLRSSSAILPFLE 440 (496)
Q Consensus 385 -----------~~~~~~~~~~~~~~~~tp~~~~------------~~~~~~~~~~~~~~~sip-~~~~L~n~t~i~~~~~ 440 (496)
.++.+..+++.+ .++.|.-.. +++...-|.+ ++..+. ..++|+|+|+|++.+.
T Consensus 290 ~~~qmvkcDP~~gkyma~cllyr-gdvvP~~v~~A~a~ikt~rt~qfvd~~v~gg--~lakv~Ravcmlsnttai~eawa 366 (407)
T KOG1376|consen 290 PANQMVKCDPRHGKYMACCLLYR-GDVVPKDVNAAIATIKTKRTIQFVDTVVPGG--DLAKVQRAVCMLSNTTAIAEAWA 366 (407)
T ss_pred ccccccccCCccchHHHHHHhcc-CCcCcccchHHHHhhhhccccccceeeccCc--chhhhceeeEecCCCcHHHHHHh
Confidence 122222232211 122222211 0111111111 333333 3467999999999999
Q ss_pred HHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHHH
Q 010957 441 NRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKMV 482 (496)
Q Consensus 441 ~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l~ 482 (496)
++..+|+.||.||+++ |||.++||+++||.|++|.|+.|.
T Consensus 367 rld~kfdLmyakrafV--hwyvgegmeegef~ea~ed~a~le 406 (407)
T KOG1376|consen 367 RLDHKFDLMYAKRAFV--HWYVGEGMEEGEFSEAREDLAALE 406 (407)
T ss_pred hcchhhhhhhcchhee--eeccCCCccccchhhhhhhHHhhc
Confidence 9999999999999987 999999999999999999999885
No 18
>PF14881 Tubulin_3: Tubulin domain
Probab=100.00 E-value=7.8e-44 Score=332.32 Aligned_cols=171 Identities=36% Similarity=0.699 Sum_probs=148.2
Q ss_pred cccceeeeccccccccCCchhhcCCccCC--CCCcccccccccccccCcchhhHHHH-HHHHHhhcCCCcceEEEEcCCC
Q 010957 155 DNHVEFWTDFSKVHYHPQSLYELGGLWMD--PQEFDNYGIGKDAFSEGFRGEEICER-LRFFVEESDHIQGFQFVVDDSG 231 (496)
Q Consensus 155 ~~~v~~WsDf~~~~~hPrS~~~l~~~~~~--~~~f~~y~~G~~~~~~~~~~d~~~d~-iR~~~EeCD~lqGfqi~~d~~g 231 (496)
.++|||||||+|++|||||++.|++|.|+ ..+|+.|+.|.++|++.++.+++.|+ ||+++||||+|||||+++|+++
T Consensus 6 ~~~vryWSDy~r~~yhPrSl~~l~~~~~~~~~~~Fd~f~~G~~~f~~~~~~~d~~D~~lR~f~EECD~lQGfQ~~~d~d~ 85 (180)
T PF14881_consen 6 PSNVRYWSDYNRVHYHPRSLNQLNDYEHNSPNMPFDTFGVGQELFKSLDYEEDFFDRDLRFFLEECDSLQGFQVLTDVDD 85 (180)
T ss_pred CCCCEECCCCCcceeCCCceEEcCccccCCCCCCcccccchHHHHhhhhhhhHHHHHHHHHHHHHcccccceEEEecCCC
Confidence 46899999999999999999999999874 46999999999999997777777765 9999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHcCCcce-eEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCcccccccccc
Q 010957 232 GFSAVAADLLENIADEYANTPV-LLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTL 310 (496)
Q Consensus 232 G~sGl~s~lle~L~dEypk~~i-~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~ 310 (496)
|||||++.+||+|+|||||+++ ++|++.++...... .......+.+|+++++.+|.++|+++|||....
T Consensus 86 gwgGfas~~Le~L~DEy~k~~i~~~~~~~~~~~~~~~-~~~~~~~~~~N~a~s~~~L~~~ssl~vPl~~~~--------- 155 (180)
T PF14881_consen 86 GWGGFASSLLEHLRDEYPKKPIIWVWGLRDPSSSSRD-APRKRRLRLLNKALSLSELSEQSSLFVPLSTLS--------- 155 (180)
T ss_pred chHhHHHHHHHHHHHHcCCCceEEeecCCCccccccc-hhhHHHHHHHHHHHHHHHHHhhCCEEEecCCCC---------
Confidence 9999999999999999999996 88887655432111 122345678999999999999999999999311
Q ss_pred ccCCCCChhhHHHHHHHHHhhccCCccc
Q 010957 311 LCIENEKPYHCSAVYAAALHSATLPYRM 338 (496)
Q Consensus 311 l~~~~~~~~~~n~liA~~l~s~T~p~R~ 338 (496)
+..+.||+++|+|++|+|+|+|+|+
T Consensus 156 ---d~~s~~htSai~A~aidT~TLp~RL 180 (180)
T PF14881_consen 156 ---DASSNWHTSAILAAAIDTITLPYRL 180 (180)
T ss_pred ---cCCCcHHHHHHHHHHHHhccccCCC
Confidence 3468899999999999999999996
No 19
>KOG1375 consensus Beta tubulin [Cytoskeleton]
Probab=100.00 E-value=2.3e-42 Score=341.94 Aligned_cols=299 Identities=20% Similarity=0.286 Sum_probs=245.3
Q ss_pred CCccceeeeccccCCCccccceeeeEeccCCC-cccccccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccc
Q 010957 44 CLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYE 122 (496)
Q Consensus 44 ~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~ 122 (496)
..+.+|+|. +...+ +|+||+|++||+++ +++++. ++ ..++++
T Consensus 8 ~~~i~~~~~--~~~~~--~~~~ravlvdlepgs~dsv~~---------------------------~~------~g~~fr 50 (369)
T KOG1375|consen 8 LERINVYYN--EAGGG--KYVPRAVLVDLEPGSMDSVRS---------------------------GP------FGQIFR 50 (369)
T ss_pred eeeeeeeec--ccccc--cccchhheeeccCcccccccc---------------------------Cc------cceecc
Confidence 447789994 44444 99999999999998 988876 45 677888
Q ss_pred cccccccccccCCCCCCCcchhccccchhhcccccceeeeccccccccCCchhhcCCccCCCCCcccccccccccccCcc
Q 010957 123 EEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVEFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFR 202 (496)
Q Consensus 123 ~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~ 202 (496)
+++ ++ . | +|| |+.|.++
T Consensus 51 p~~-------~~-----s--------------------g----~gh---------------------y~~ga~~------ 67 (369)
T KOG1375|consen 51 PDN-------GQ-----S--------------------G----KGH---------------------YTEGAEL------ 67 (369)
T ss_pred CcC-------Cc-----c--------------------C----ccc---------------------eeeeeee------
Confidence 765 11 1 3 566 9999988
Q ss_pred hhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHH
Q 010957 203 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDT 281 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~ 281 (496)
.|. .||+|||||+.|+++||+ +|+|++++..|++|||.+.+.++++.|++ .++++++|||+.
T Consensus 68 ~ds----------~~dclqgfql~hs~gggtGsg~gt~l~~k~~ee~~d~i~~~~sv~ps~-------ksd~vvepyna~ 130 (369)
T KOG1375|consen 68 VDS----------SCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSP-------KSDTVVEPYNAT 130 (369)
T ss_pred hhc----------ccchhhcceeeeeccCccccCcchhhHHHHHHhccchhcccccccCcc-------cccceecccccc
Confidence 554 899999999999999999 99999999999999999999999999988 378999999999
Q ss_pred hhhhhhcccccEEEEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhh
Q 010957 282 VSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQ 361 (496)
Q Consensus 282 Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~ 361 (496)
|++++|.++||.++|++|++|++ ||...+.+..++ ++|..+||+ |. ++.+++++..
T Consensus 131 ls~~ql~en~~et~cidNeal~d-ic~~~lkl~~~~-------------g~tt~~rf~--g~--------lnadl~kl~v 186 (369)
T KOG1375|consen 131 LSVHQLVENADETFCIDNEALYD-ICFRTLKLKTPS-------------GVTTCLRFP--GQ--------LNADLTKLAV 186 (369)
T ss_pred cchhhhhcCCCcccccccHHHHH-HHhhhhcccCCC-------------Cceeecccc--cc--------cchhhhhhhh
Confidence 99999999999999999999999 999999888877 899999999 54 6789999999
Q ss_pred hccccccccchhhcCCCCCCCCCchhhhHH----HHHhcc-C---------CCC--------cCCcC-----------CC
Q 010957 362 MLAGQARQNTVAILDAAMPAPALNGKQHEQ----SLLGNL-Q---------PLT--------PELLN-----------SP 408 (496)
Q Consensus 362 ~L~~~~r~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~-~---------~~t--------p~~~~-----------~~ 408 (496)
+++|+||+|| .++...|+.....+++.. .+.+++ + .+| .+..+ +.
T Consensus 187 nmvpfp~lhf--fm~g~~pl~s~~~~q~~a~tv~eltqq~fdaknmm~a~dyLt~a~~~rGsmkevDeqm~~vqnk~ss~ 264 (369)
T KOG1375|consen 187 NMVPFPRLHF--FMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMTACDYLTVAAMFRGSMKEVDEQMLNVQNKNSSY 264 (369)
T ss_pred ccCCCcchhh--ccccccccccccccccccccccccccccccCcchhhhhhhhhhHHHhccchhhhHHHhhhccccCcch
Confidence 9999999998 556677776554333221 111111 0 000 00000 24
Q ss_pred cccCCCCCc-cceeccCc------eeEeecccchHHHHHHHHHHhhhhhhhhcccccceeeccCCCcchHHHHHHHHHHH
Q 010957 409 FVGSSPRGS-LEVHSIPM------AVRLRSSSAILPFLENRLGNLRRYGLQRGALGAELLRNWGFADDELYDMGEMLSKM 481 (496)
Q Consensus 409 ~~~~~~~~~-~~~~sip~------~~~L~n~t~i~~~~~~~~~~~~~l~~~r~~~~~~~y~~~g~~~~ef~e~~e~l~~l 481 (496)
|..|.|.+. +++|+||+ .+.++|+++|+++|+++.++|..|+.||+++ |||+++||++.||+||..++.+|
T Consensus 265 f~~wiP~~vktavCdipp~glkms~tf~~n~taiqelf~~i~eqftamfrrkAfl--hwy~~egMde~EFtEAes~~ndL 342 (369)
T KOG1375|consen 265 FVEWIPNNVKTAVCDIPPGGLKMSSTFIGNNTAIQELFRCISEQFTAMFRRKAFL--HWYTGEGMDEMEFTEAESNMNDL 342 (369)
T ss_pred hhhhcccccceeeccCCCccccccccccccchhHHHHHHHhhhHHHHHHHhhhhh--hhcccccchhhhhhHHHHHHHHH
Confidence 556666665 89999997 6789999999999999999999998777777 99999999999999999999999
Q ss_pred HhcccC
Q 010957 482 VSTMKP 487 (496)
Q Consensus 482 ~~~Y~~ 487 (496)
+.+|++
T Consensus 343 i~eyqQ 348 (369)
T KOG1375|consen 343 VSEYQQ 348 (369)
T ss_pred HHHHHH
Confidence 999964
No 20
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=100.00 E-value=2.5e-41 Score=346.25 Aligned_cols=222 Identities=27% Similarity=0.383 Sum_probs=196.7
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-cccccc
Q 010957 3 EIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMSS 81 (496)
Q Consensus 3 EIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l~~ 81 (496)
|||+||+|||||+||.+||++. |+||+++. +..++.
T Consensus 1 eii~i~iG~~G~~i~~~~~~~~-------------------------------------------v~idtd~~~l~~~~~ 37 (328)
T cd00286 1 EIVTIQLGQAGNQIGAKFWEQL-------------------------------------------VLVDTEPGVIDETLS 37 (328)
T ss_pred CeEEEecCccHhHHHHHHHHhh-------------------------------------------heecCCHHHHHHHhC
Confidence 8999999999999999999763 88888887 766654
Q ss_pred cccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccceee
Q 010957 82 RGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVEFW 161 (496)
Q Consensus 82 ~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~~W 161 (496)
.+ .+.+++.++ .+.+..|+||| |
T Consensus 38 ---------------------------~~------~~~~~~~~~----~~~~~~gag~n--------------------~ 60 (328)
T cd00286 38 ---------------------------GP------YRLLFCIGQ----LITHGGGAGNN--------------------W 60 (328)
T ss_pred ---------------------------cc------cccccCccc----eeecCCCCCCC--------------------c
Confidence 12 233455555 66677899999 9
Q ss_pred eccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHH
Q 010957 162 TDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADL 240 (496)
Q Consensus 162 sDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~l 240 (496)
++|+ +..|.+. .|+++|+||+++|+||++|||+++|+++||| ||+|+.+
T Consensus 61 ---~~G~---------------------~~~~~~~------~e~i~~~ir~~~E~cD~~~gf~i~~slgGGTGsG~~~~i 110 (328)
T cd00286 61 ---AFGH---------------------ETAGEEY------QEEILDIIRKEAEECDSLQGFFITHSLGGGTGSGLGPVL 110 (328)
T ss_pred ---ceee---------------------ccccHHH------HHHHHHHHHHHHHhCCCccceEEEeecCCCccccHHHHH
Confidence 9997 7777766 8999999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhh
Q 010957 241 LENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYH 320 (496)
Q Consensus 241 le~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~ 320 (496)
+|.|+|||||+++++++++|+. ... +++++||++|++++|.+++|+++|++|++|.+ +|.+.+.++.+.+.+
T Consensus 111 ~e~l~d~y~~~~~~~~~v~P~~------~~~-~~~~~yNa~l~l~~L~e~~d~~i~~dN~~l~~-~~~~~~~~~~~~~~~ 182 (328)
T cd00286 111 AERLKDEYPKRLKITFSILPGP------DEG-VIVRPYNSILTLHTLTEHSDCLVVIDNEALFD-ICPRPLHIDKPTFDH 182 (328)
T ss_pred HHHHHHHcCccceeEEEecCCC------CCc-chhhhhHHHHHHHHHHhcCCeEEEecchhHHH-HhHHhcCCCCCCHHH
Confidence 9999999999999999999986 222 68999999999999999999999999999998 788778888899999
Q ss_pred HHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhhhccccccccch
Q 010957 321 CSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQMLAGQARQNTV 372 (496)
Q Consensus 321 ~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~~L~~~~r~~~~ 372 (496)
+|++||++|+++|.|+|++ +. .+++++++..+|+|+|+.+++
T Consensus 183 ~N~~ia~~i~~~t~~~r~~--g~--------~n~d~~~~~~~l~p~p~~~~~ 224 (328)
T cd00286 183 INELLATALSSLTTPLRFD--GS--------LNVDLRELSENLVPFPRLHFL 224 (328)
T ss_pred HHHHHHhhccccccccccC--cc--------ccchHHHHhhhcCCCCCceee
Confidence 9999999999999999999 44 578999999999999999883
No 21
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=100.00 E-value=1.4e-37 Score=300.34 Aligned_cols=212 Identities=25% Similarity=0.477 Sum_probs=183.9
Q ss_pred eEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCC-cccccc
Q 010957 3 EIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGS-LGSMSS 81 (496)
Q Consensus 3 EIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~-~~~l~~ 81 (496)
|||+||+|||||+||..||++++.+|+++.+.... ....+.++||+ +...| +|+||+|+||+++. +..++.
T Consensus 1 eii~i~iGq~G~qIg~~~~~~l~~e~~~~~~~~~~----~~~~~~~~~f~--~~~~~--~~~~r~i~iDtd~~~l~~i~~ 72 (216)
T PF00091_consen 1 EIIVIGIGQCGNQIGDAFWELLCREHGINPDSKSQ----YNRENINSFFS--ESSSG--KYVPRAIAIDTDPKVLDEIRA 72 (216)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHCTBTTTSSSS----TTSSTGCCTEE--ESTTT--BESEEEEEEESSHHHHHHHHT
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHhhccccccccc----cccccccceee--ecccc--ccccccccccccccccccccc
Confidence 89999999999999999999999999998762211 13457789997 44555 89999999999998 888765
Q ss_pred cccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCCcchhccccchhhcccccceee
Q 010957 82 RGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSDSQREIQDKDIVEFLDNHVEFW 161 (496)
Q Consensus 82 ~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn~~~~~~~~~~~~~l~~~v~~W 161 (496)
.+ .+.++.+++ ++.+++|+|+| |
T Consensus 73 ---------------------------~~------~~~l~~~~~----~~~~~~g~g~n--------------------~ 95 (216)
T PF00091_consen 73 ---------------------------SP------KRSLFDPNN----LISGQEGSGNN--------------------W 95 (216)
T ss_dssp ---------------------------SE------ETTESCGGG----EEETSSTSTTS--------------------H
T ss_pred ---------------------------cc------ccccccccc----ccccccccccc--------------------c
Confidence 22 335677766 78888899999 9
Q ss_pred eccccccccCCchhhcCCccCCCCCcccccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHH
Q 010957 162 TDFSKVHYHPQSLYELGGLWMDPQEFDNYGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADL 240 (496)
Q Consensus 162 sDf~~~~~hPrS~~~l~~~~~~~~~f~~y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~l 240 (496)
++|+ +..|.++ .++++|+||+.+|+||.++||+++++++||| ||+++.+
T Consensus 96 ---~~G~---------------------~~~~~~~------~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l 145 (216)
T PF00091_consen 96 ---AVGY---------------------YTFGEEA------LEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVL 145 (216)
T ss_dssp ---HHHH---------------------HHHHHHH------HHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHH
T ss_pred ---cccc---------------------ccccccc------ccccccccchhhccccccccceecccccceecccccccc
Confidence 9997 7777878 8999999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCCh
Q 010957 241 LENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKP 318 (496)
Q Consensus 241 le~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~ 318 (496)
++.|+++||++++++++++|.. . +.++++||++++|+.|.+++|.+++++|++|.+ +|.+.+.++.|.|
T Consensus 146 ~~~l~~~y~~~~~~~~~ilP~~-------~-e~~~~~~Na~~~l~~l~~~~d~~i~~dN~~l~~-~~~~~l~~~~~~f 214 (216)
T PF00091_consen 146 AEMLREEYPKKPIISFSILPFS-------S-EGVVEPYNALLSLSELQEYADSVILFDNDALYK-ICKNQLGIENPAF 214 (216)
T ss_dssp HHHHHHTSTTSEEEEEEEE-CG-------G-GSHHHHHHHHHHHHHHHHTSSEEEEEEHHHHHH-HHHHTSSHSSHHH
T ss_pred chhhhccccccceeeccccccc-------c-ccccccceehhHHHHHHHhCCEEEEEcHHHHHH-HHhccCCCCCCCc
Confidence 9999999999999999999974 4 789999999999999999999999999999998 7888888776654
No 22
>PF10644 Misat_Tub_SegII: Misato Segment II tubulin-like domain; InterPro: IPR019605 The misato protein contains three distinct, conserved domains, segments I, II and III and is involved in the regulation of mitochondrial distribution and morphology []. This entry represents misato segment II. Segments I and III are common to tubulins (IPR003008 from INTERPRO), but segment II aligns with myosin heavy chain sequences from Drosophila melanogaster (Fruit fly, P05661 from SWISSPROT), rabbit (P04460 from SWISSPROT), and human. Segment II of misato is a major contributor to its greater length compared with the various tubulins. The most significant sequence similarities to this 54-amino acid region are from a motif found in the heavy chains of myosins from different organisms. A comparison of segment II with the vertebrate myosin heavy chains reveals that it is homologous to a myosin peptide in the hinge region linking the S2 and LMM domains. Segment II also contains heptad repeats which are characteristic of the myosin tail alpha-helical coiled-coils [].
Probab=100.00 E-value=1.1e-33 Score=245.67 Aligned_cols=114 Identities=41% Similarity=0.780 Sum_probs=104.4
Q ss_pred eeEEEEecCCchhHHHHHHHHHHHHHcCCCCCCCCCccccccCCccceeeeccccCCCccccceeeeEeccCCCcccccc
Q 010957 2 REIVTVQVGGFANFIGSHFWNFQDELLGLASDPNNDPVFRNQCLNMDVLYRTGETQQGVLTYTPRLLSVGFQGSLGSMSS 81 (496)
Q Consensus 2 rEIItlq~Gq~gN~iG~hfWn~q~~~~~~~~~~~~~~~~~~~~~~~~v~fr~~~t~~g~~ty~PR~l~vDl~~~~~~l~~ 81 (496)
|||||||+|+++|+|||||||+||+.+.++++... .+++++|+||+|++.+|.+||+||+|+||+|+++|+|++
T Consensus 1 ~EIiTlq~G~~aN~vgtHfwN~Qe~~~~y~~~~~~------~~i~~dvlfR~g~~~~g~~TYtPRlL~~Dlkg~lGsL~~ 74 (115)
T PF10644_consen 1 REIITLQLGHYANFVGTHFWNIQESYLPYDPDEKP------SEIDHDVLFREGITLSGTVTYTPRLLLFDLKGGLGSLRK 74 (115)
T ss_pred CcEEEEEcccccCcHHHhhhhhhhcccccCccccC------cccCCceEEecccCcCCCeeECCcEEEEecCCCcCcccc
Confidence 79999999999999999999999999977765432 467999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCccccCCcceecccCCcccchhhhhcc
Q 010957 82 RGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLY 121 (496)
Q Consensus 82 ~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~ 121 (496)
.|.+|+....+..+...|+|++++++++|++||+|+++|+
T Consensus 75 ~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~ks~yq~~Ld 114 (115)
T PF10644_consen 75 YGYLYEQDDSAPDNQSTWDGKVEVQRQPPIPKSEYQQDLD 114 (115)
T ss_pred cccccccCcccccccccCCCceEEEeCCCCCCCHHHHHhc
Confidence 9999996666667778999999999999999999999986
No 23
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain. This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.
Probab=99.92 E-value=7.8e-26 Score=214.53 Aligned_cols=176 Identities=16% Similarity=0.221 Sum_probs=150.1
Q ss_pred ccceeeeEeccCCC-cccccccccccCCCCCCCCCccccCCcceecccCCcccchhhhhccccccccccccccCCCCCCC
Q 010957 62 TYTPRLLSVGFQGS-LGSMSSRGLLYNESSPGPSDVVTWSGSVSTHASAPRKKNLFLQRLYEEEQESFSMINGTSSGKSD 140 (496)
Q Consensus 62 ty~PR~l~vDl~~~-~~~l~~~g~ly~~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~nn 140 (496)
+|.||+|.+|++++ +..+.. .+ .+.++++.+ .+.++.+.|||
T Consensus 9 ~~g~r~v~~d~e~~~i~~i~~---------------------------~t------~~~~l~~~~----~~~~k~~~Gn~ 51 (192)
T smart00864 9 GYGPNAVLVDLEPGVVDEVRA---------------------------NT------DAQALNPES----LASGKIGAGNN 51 (192)
T ss_pred CchhhHHhhhcccCCceEEEE---------------------------CC------HHHHhCCcc----cccchhccccc
Confidence 68999999999997 554432 12 344555544 56677888888
Q ss_pred cchhccccchhhcccccceeeeccccccccCCchhhcCCccCCCCCccccc-----ccccccccCcchhhHHHHHHHHHh
Q 010957 141 SQREIQDKDIVEFLDNHVEFWTDFSKVHYHPQSLYELGGLWMDPQEFDNYG-----IGKDAFSEGFRGEEICERLRFFVE 215 (496)
Q Consensus 141 ~~~~~~~~~~~~~l~~~v~~WsDf~~~~~hPrS~~~l~~~~~~~~~f~~y~-----~G~~~~~~~~~~d~~~d~iR~~~E 215 (496)
| ++|+ |+ .|+++ .++++|+||+++|
T Consensus 52 --------------------~---~~G~---------------------~~~~~~~~g~~~------~~~~~~~ir~~le 81 (192)
T smart00864 52 --------------------W---TRGL---------------------GAGADPEVGREA------AEESLDEIREELE 81 (192)
T ss_pred --------------------c---cccC---------------------CCCCChHHHHHH------HHHHHHHHHHHhc
Confidence 9 9996 55 56666 8899999999999
Q ss_pred hcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhhhhhhcccccEE
Q 010957 216 ESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVSFSRLASFGKLI 294 (496)
Q Consensus 216 eCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~ 294 (496)
+| ++|+++++++||| ||+++.+++.++ +||+.. ++++++|. ..+.++++||+++++++|.+++|.+
T Consensus 82 ~~---d~~~i~~slgGGTGsG~~~~i~~~~~-~~~~~~-~~~~v~P~--------~~e~~~~~~Na~~~l~~l~~~~d~~ 148 (192)
T smart00864 82 GA---DGVFITAGMGGGTGTGAAPVIAEIAK-EYGILT-VAVVTKPF--------VFEGVVRPYNAELGLEELREHVDSL 148 (192)
T ss_pred CC---CEEEEeccCCCCccccHHHHHHHHHH-HcCCcE-EEEEEEeE--------eecchhHHHHHHHHHHHHHHhCCEE
Confidence 99 9999999999999 999999999999 999877 89999993 3467899999999999999999999
Q ss_pred EEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccC
Q 010957 295 VPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRME 339 (496)
Q Consensus 295 ~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~ 339 (496)
++++|++|.+ .|.+.+.+ .+.|.++|.+||++|.++|.++||+
T Consensus 149 i~~dN~~l~~-~~~~~~~~-~~~~~~~N~~i~~~i~~i~~~~rf~ 191 (192)
T smart00864 149 IVIDNDALLD-ICGRNLPI-RPAFKDANDLLAQAVSGITDLIRFP 191 (192)
T ss_pred EEEEhHHHHH-HHhccCCc-hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999988 77766655 5789999999999999999999997
No 24
>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.85 E-value=4e-21 Score=197.74 Aligned_cols=150 Identities=16% Similarity=0.192 Sum_probs=130.7
Q ss_pred ccccccccccCcchhhHHHHHHHHHhhcCC--CcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCcccc
Q 010957 190 YGIGKDAFSEGFRGEEICERLRFFVEESDH--IQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMN 266 (496)
Q Consensus 190 y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~--lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~ 266 (496)
+..|++. .++..|.||+.+|.||. +|+|+++++++||| +|+++.+++.++++|+ ++++++.++|..
T Consensus 72 ~~~G~~~------aee~~e~I~~~le~~~~~~~d~~~i~aglGGGTGsG~~p~iae~lke~~~-~~~~~iv~~P~~---- 140 (349)
T cd02202 72 RELGAEV------AEEDLEEVMRAIDDRGTSDADAILVIAGLGGGTGSGGAPVLAKELKERYE-EPVYALGVLPAR---- 140 (349)
T ss_pred hHHHHHH------HHHHHHHHHHHHhccccccccEEEEecccCCCccccHHHHHHHHHHHhCC-ccEEEEEEecCC----
Confidence 4567777 88899999999999997 99999999999999 9999999999999999 889999999975
Q ss_pred ccchhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccC---CCCC
Q 010957 267 LRSRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRME---PVGP 343 (496)
Q Consensus 267 ~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~---~~g~ 343 (496)
.+.++++||+++++++|.+++|.+++++|++|.+ ++.+ + .+.|.++|.+||+.|..+|.+.|+. ..|.
T Consensus 141 ----~eg~~~~~NA~~~l~~L~~~~D~viv~dNd~L~~-~~~~---~-~~~f~~~N~~Ia~~i~~l~~~~r~~~~~~~g~ 211 (349)
T cd02202 141 ----EEGERYSANAARSLDALSEEADAIILFDNDAWKR-KGES---V-EEAYDRINEEIARRIGLLLRAGEANAGDSVGE 211 (349)
T ss_pred ----CCCchhhHHHHHHHHHHHHhCCEEEEEehHHHhh-hccc---h-HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCe
Confidence 2348899999999999999999999999999987 5532 2 2678899999999999999999992 1233
Q ss_pred CCCcccccCCcChhhhhhhccccc
Q 010957 344 TADSFDVFGAVDINGFVQMLAGQA 367 (496)
Q Consensus 344 ~~d~~~~s~~~~l~~~~~~L~~~~ 367 (496)
.++|+.++..+|...+
T Consensus 212 --------invD~~dv~~~L~~~G 227 (349)
T cd02202 212 --------SVLDASEVINTLSGGG 227 (349)
T ss_pred --------EeccHHHHHHHhccCC
Confidence 5789999999998654
No 25
>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.65 E-value=1.5e-16 Score=160.84 Aligned_cols=146 Identities=18% Similarity=0.153 Sum_probs=126.0
Q ss_pred ccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCcccccc
Q 010957 190 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 268 (496)
Q Consensus 190 y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~ 268 (496)
+..|++. .++.+|+||+.+|.||. |++++.++||| ||++..+++.++|+|+ +++++.|.+
T Consensus 64 ~~~G~~~------a~e~~~~I~~~le~~D~---v~i~aglGGGTGSG~ap~ia~~~ke~~~----~~~~vvt~P------ 124 (303)
T cd02191 64 PELGAEA------AEEVQEAIDNIPVHVDM---VFITAGLGGGTGTGGAPVVAEHLKRIGT----LTVAVVTLP------ 124 (303)
T ss_pred HHHHHHH------HHHHHHHHHHHHcCCCE---EEEEeccCCccchhHHHHHHHHHHHhCC----CEEEEEeCC------
Confidence 5667777 88899999999999994 99999999999 9999999999999996 566666554
Q ss_pred chhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccCCCCCCCCcc
Q 010957 269 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 348 (496)
Q Consensus 269 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~ 348 (496)
...+..+++||+.+++++|.+++|.+++++|++|.+ ++.+ +.++ +.|.++|.+||+++.++|...|++ |.
T Consensus 125 f~~Eg~~~~~NA~~~l~~L~~~~D~~iv~dN~~L~~-~~~~-~~~~-~af~~~N~~ia~~i~~it~~i~~~--g~----- 194 (303)
T cd02191 125 FSDEGGIRMLNAAEGFQTLVREVDNLMVIPNEKLRQ-IGEK-ASLE-GAFDHADEVLVRAVGGLFGAIEIE--GE----- 194 (303)
T ss_pred cccCCccchhhHHHHHHHHHHhCCEEEEEehHHHHH-Hhhc-CChH-HHHHHHHHHHHHHHHHHHHhhccC--Cc-----
Confidence 244667899999999999999999999999999988 6655 6665 478899999999999999999998 44
Q ss_pred cccCCcChhhhhhhccccc
Q 010957 349 DVFGAVDINGFVQMLAGQA 367 (496)
Q Consensus 349 ~~s~~~~l~~~~~~L~~~~ 367 (496)
.++|+.++.+.|...+
T Consensus 195 ---invD~~dv~~~l~~~G 210 (303)
T cd02191 195 ---INVDFADVKNVMDGGG 210 (303)
T ss_pred ---ccCCHHHHHHHhccCC
Confidence 6799999999886443
No 26
>TIGR00065 ftsZ cell division protein FtsZ. This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.
Probab=99.58 E-value=2.3e-15 Score=154.78 Aligned_cols=147 Identities=19% Similarity=0.214 Sum_probs=121.6
Q ss_pred ccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCcccccc
Q 010957 190 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 268 (496)
Q Consensus 190 y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~ 268 (496)
+..|+++ .++.+|+||+.+|.||.+ +++++++||| ||++. ++.++..||+ ++++++.+.+
T Consensus 81 ~~~G~~~------aee~~d~Ir~~le~~D~v---fI~aglGGGTGSG~ap-via~~ake~~---~l~vaivt~P------ 141 (349)
T TIGR00065 81 PEIGRKA------AEESRDEIRKLLEGADMV---FITAGMGGGTGTGAAP-VVAKIAKELG---ALTVAVVTKP------ 141 (349)
T ss_pred HHHHHHH------HHHHHHHHHHHHhCCCEE---EEEEeccCccchhHHH-HHHHHHHHcC---CCEEEEEeCC------
Confidence 6667777 889999999999999995 8999999999 99866 6666677776 4455554433
Q ss_pred chhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccCCCCCCCCcc
Q 010957 269 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 348 (496)
Q Consensus 269 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~ 348 (496)
...+..+++||+.+++.+|.+++|.+++++|++|.+ +|.. +.++. .|..+|.+||+++.++|.++|++ |.
T Consensus 142 f~~Eg~~r~~nA~~~l~~L~~~~D~vividNd~L~~-~~~~-~~i~~-af~~~N~iia~~i~~it~~ir~~--g~----- 211 (349)
T TIGR00065 142 FKFEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLLE-VVPN-LPLND-AFKVADDVLVRAVKGISELITKP--GL----- 211 (349)
T ss_pred ccccchhhHHHHHHHHHHHHHhCCEEEEEeCHHHHH-hhcC-CCHHH-HHHHHHHHHHHHHHhHHHhhccC--Cc-----
Confidence 234668899999999999999999999999999988 6655 66643 78889999999999999999998 44
Q ss_pred cccCCcChhhhhhhcccccc
Q 010957 349 DVFGAVDINGFVQMLAGQAR 368 (496)
Q Consensus 349 ~~s~~~~l~~~~~~L~~~~r 368 (496)
.++|+.++.+.|...+.
T Consensus 212 ---iNvDf~dv~~vl~~~G~ 228 (349)
T TIGR00065 212 ---INIDFADVRAVMSGGGV 228 (349)
T ss_pred ---CcCCHHHHHHHHhcCCe
Confidence 67899999998876543
No 27
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=99.54 E-value=8.2e-15 Score=148.67 Aligned_cols=149 Identities=17% Similarity=0.130 Sum_probs=121.3
Q ss_pred ccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCcccccc
Q 010957 190 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 268 (496)
Q Consensus 190 y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~ 268 (496)
+..|++. .++..|+||+.+|.||.+ +++++++||| ||++..+ .++..||+. +++++.+.|
T Consensus 64 ~~~g~~~------a~~~~~~I~~~l~~~d~v---~i~aglGGGTGSG~ap~i-a~~a~e~g~---~~~~vvt~P------ 124 (304)
T cd02201 64 PEVGRKA------AEESREEIKEALEGADMV---FITAGMGGGTGTGAAPVI-AKIAKEMGA---LTVAVVTKP------ 124 (304)
T ss_pred HHHHHHH------HHHHHHHHHHHHhCCCEE---EEeeccCCCcchhHHHHH-HHHHHHcCC---CEEEEEeCC------
Confidence 5667676 788999999999999985 9999999999 9997775 556667874 444444333
Q ss_pred chhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccCCCCCCCCcc
Q 010957 269 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 348 (496)
Q Consensus 269 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~ 348 (496)
...+..+++||+.+++..|.+++|.+++++|++|.+ +|.+.+.+.. .|..+|.+||+++.++|.++|++ |.
T Consensus 125 f~~Eg~~~~~nA~~~l~~L~~~~d~~ividN~~L~~-~~~~~~~i~~-af~~~n~~ia~~i~~it~~~~~~--g~----- 195 (304)
T cd02201 125 FSFEGKKRMRQAEEGLEELRKHVDTLIVIPNDKLLE-VVDKNLPLLE-AFKLADDVLAQAVKGISDLITKP--GL----- 195 (304)
T ss_pred ccccchhHHHHHHHHHHHHHHhCCEEEEEecHHHHH-hhccCCCHHH-HHHHHHHHHHHHHHHHHHHhccC--cc-----
Confidence 234556899999999999999999999999999988 7766666654 68889999999999999999998 43
Q ss_pred cccCCcChhhhhhhccccccc
Q 010957 349 DVFGAVDINGFVQMLAGQARQ 369 (496)
Q Consensus 349 ~~s~~~~l~~~~~~L~~~~r~ 369 (496)
.++|+.++.+.|...+..
T Consensus 196 ---invD~~dv~~vl~~~G~a 213 (304)
T cd02201 196 ---INLDFADVKTVMKNKGVA 213 (304)
T ss_pred ---ccCCHHHHHHHhccCCeE
Confidence 678999999999865543
No 28
>PRK13018 cell division protein FtsZ; Provisional
Probab=99.43 E-value=2.2e-13 Score=140.81 Aligned_cols=146 Identities=14% Similarity=0.111 Sum_probs=121.7
Q ss_pred ccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCcccccc
Q 010957 190 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 268 (496)
Q Consensus 190 y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~ 268 (496)
+..|++. .++..|.||+.+|.||. |+|+++++||| ||++..+++.+++ ++ ...+.+.+.|..
T Consensus 92 p~~G~~a------aee~~d~I~~~le~~D~---vfI~aGLGGGTGSGaapvIa~iake-~g-~ltv~vVt~Pf~------ 154 (378)
T PRK13018 92 PEVGRKA------AEESRDEIKEVLKGADL---VFVTAGMGGGTGTGAAPVVAEIAKE-QG-ALVVGVVTKPFK------ 154 (378)
T ss_pred hHHHHHH------HHHHHHHHHHHhcCCCE---EEEEeeccCcchhhHHHHHHHHHHH-cC-CCeEEEEEcCcc------
Confidence 4556666 78889999999999998 99999999999 9999988888875 55 344555667764
Q ss_pred chhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccCCCCCCCCcc
Q 010957 269 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 348 (496)
Q Consensus 269 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~ 348 (496)
.+...+..|+.++|.+|.+++|.+++++|++|.+ +| +.+.++ ..|..+|.+||+++.++|.++|++ |.
T Consensus 155 --~EG~~r~~nA~~gL~~L~e~~D~vividNd~L~~-i~-~~~~i~-~af~~~N~iIa~~I~~It~~i~~~--G~----- 222 (378)
T PRK13018 155 --FEGRARMQKAEEGIERLREAADTVIVIDNNRLLD-IV-PNLPIA-DAFSVADEVIAETVKGITETITKP--SL----- 222 (378)
T ss_pred --cccHhHHHHHHHHHHHHHHhCCEEEEEecHHHHH-HH-hcCCHH-HHHHHHHHHHHHHHHhhhhhcccC--Cc-----
Confidence 3456778999999999999999999999999988 67 666665 368889999999999999999998 44
Q ss_pred cccCCcChhhhhhhccccc
Q 010957 349 DVFGAVDINGFVQMLAGQA 367 (496)
Q Consensus 349 ~~s~~~~l~~~~~~L~~~~ 367 (496)
.++|+.++.+.|...+
T Consensus 223 ---iN~Df~dv~~vl~~~G 238 (378)
T PRK13018 223 ---INLDFADVKSVMKGGG 238 (378)
T ss_pred ---eecCHHHHHHHhccCC
Confidence 6789999999887543
No 29
>PRK09330 cell division protein FtsZ; Validated
Probab=99.27 E-value=5.1e-12 Score=130.84 Aligned_cols=147 Identities=18% Similarity=0.144 Sum_probs=122.3
Q ss_pred ccccccccccCcchhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCcccccc
Q 010957 190 YGIGKDAFSEGFRGEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLR 268 (496)
Q Consensus 190 y~~G~~~~~~~~~~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~ 268 (496)
+..|++. .++..|.||+.+|.||.+ +|++.++||| +|.+. ++..+..||+ +++++|.+.+
T Consensus 77 pe~G~~a------aee~~e~I~~~l~~~D~v---fI~AGmGGGTGTGaap-vIA~iake~g---~ltvaVvt~P------ 137 (384)
T PRK09330 77 PEVGRKA------AEESREEIREALEGADMV---FITAGMGGGTGTGAAP-VVAEIAKELG---ILTVAVVTKP------ 137 (384)
T ss_pred HHHHHHH------HHHHHHHHHHHHcCCCEE---EEEecCCCcccHHHHH-HHHHHHHHcC---CcEEEEEecC------
Confidence 5567777 888999999999999998 8899999999 89887 8888999997 6677776644
Q ss_pred chhhhHHHHHHHHhhhhhhcccccEEEEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccCCCCCCCCcc
Q 010957 269 SRKQTIFRELHDTVSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSF 348 (496)
Q Consensus 269 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~ 348 (496)
...+..+++||+.++|..|.+++|.+++++|+.|.+ ++.+.+.+.. .|..+|.+|+.++.++|...|++ |-
T Consensus 138 F~fEG~~r~~nA~~gL~~L~~~~D~vIvi~Nd~L~~-~~~~~~~l~~-Af~~ad~vL~~~v~~It~~i~~p--G~----- 208 (384)
T PRK09330 138 FSFEGKKRMKQAEEGIEELRKHVDTLIVIPNDKLLE-VVDKKTPLLD-AFKAADDVLRQAVQGITDLITKP--GL----- 208 (384)
T ss_pred ccccchhHHHHHHHHHHHHHHHCCEEEEEecHHHHh-hccCCCCHHH-HHHHHHHHHHHHHHHHHHHHhcC--Cc-----
Confidence 345677899999999999999999999999999987 6655455443 67789999999999999999987 43
Q ss_pred cccCCcChhhhhhhccccc
Q 010957 349 DVFGAVDINGFVQMLAGQA 367 (496)
Q Consensus 349 ~~s~~~~l~~~~~~L~~~~ 367 (496)
.++|..++-+.|...+
T Consensus 209 ---iNvDfaDvk~vm~~~G 224 (384)
T PRK09330 209 ---INLDFADVKTVMSEMG 224 (384)
T ss_pred ---ccCCHHHHHHHHhcCC
Confidence 5788888888876544
No 30
>COG0206 FtsZ Cell division GTPase [Cell division and chromosome partitioning]
Probab=94.88 E-value=0.073 Score=54.75 Aligned_cols=141 Identities=16% Similarity=0.091 Sum_probs=93.5
Q ss_pred hhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHH
Q 010957 203 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDT 281 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~ 281 (496)
.++..+.|+..++..| =+.+...++||| +|.+- ++..+..|| +...+...+.|.. .+-..+.-|+.
T Consensus 82 Aee~~~~I~~~l~g~d---mvfitaG~GGGTGtGaaP-Vvakiake~-g~ltvavvt~Pf~--------~EG~~r~~~A~ 148 (338)
T COG0206 82 AEESIEEIEEALKGAD---MVFVTAGMGGGTGTGAAP-VVAEIAKEL-GALTVAVVTLPFS--------FEGSPRMENAE 148 (338)
T ss_pred HHHHHHHHHHHhccCC---eEEEEeeecCCccccccH-HHHHHHHhc-CCcEEEEEEecch--------hcCchHHHHHH
Confidence 6777888888877777 466778889999 66554 454455554 4555555567754 23345667899
Q ss_pred hhhhhhcccccEEEEecCCccccccccccccCCCCChhhHHHHHHHHHhhccCCcccCCCCCCCCcccccCCcChhhhhh
Q 010957 282 VSFSRLASFGKLIVPVGLPFLNESKASTLLCIENEKPYHCSAVYAAALHSATLPYRMEPVGPTADSFDVFGAVDINGFVQ 361 (496)
Q Consensus 282 Lsl~~l~e~sd~~~pl~n~~l~~~~~~~~l~~~~~~~~~~n~liA~~l~s~T~p~R~~~~g~~~d~~~~s~~~~l~~~~~ 361 (496)
-.+..|.+++|-++.++|+.|.. ... ...+ ...|--.+.+++..+-.++--.-.+ +- -++|..++-+
T Consensus 149 ~gi~~L~~~~DtlIvi~Ndkll~-~~~-~~~~-~~Af~~ad~vl~~~v~~i~e~I~~~--gl--------invDfaDv~~ 215 (338)
T COG0206 149 EGIEELREVVDTLIVIPNDKLLK-GKD-KTPI-AEAFNEADDVLGNAVKGITELITKP--GL--------VNVDFADVRT 215 (338)
T ss_pred HHHHHHHHhCCcEEEEecHHHHh-ccC-cccH-HHHHHHHHHHHHHHHHHHHHHhccC--ce--------EeecHHHHHH
Confidence 99999999999999999998765 221 1100 0123345777777777766544333 32 4678888888
Q ss_pred hccccccc
Q 010957 362 MLAGQARQ 369 (496)
Q Consensus 362 ~L~~~~r~ 369 (496)
.+...+..
T Consensus 216 vm~~~G~A 223 (338)
T COG0206 216 VMKGGGFA 223 (338)
T ss_pred HHhcCCce
Confidence 88775554
No 31
>PF03953 Tubulin_C: Tubulin C-terminal domain; InterPro: IPR018316 This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.; GO: 0003924 GTPase activity, 0005525 GTP binding, 0006184 GTP catabolic process, 0051258 protein polymerization, 0043234 protein complex; PDB: 3RYH_A 3RYI_A 3HKE_C 3HKD_C 3HKB_A 3N2K_A 3N2G_A 3HKC_C 3RYF_C 3RYC_A ....
Probab=93.85 E-value=0.19 Score=44.17 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=26.5
Q ss_pred cccCCCCCc-cceeccCc---------eeEeecccchHHHHHHHHH
Q 010957 409 FVGSSPRGS-LEVHSIPM---------AVRLRSSSAILPFLENRLG 444 (496)
Q Consensus 409 ~~~~~~~~~-~~~~sip~---------~~~L~n~t~i~~~~~~~~~ 444 (496)
|+.|.|.+. .++|.+|+ +++|+|+|+|.++|+++.+
T Consensus 81 Fv~W~p~~~kv~~~~~~p~~~~~s~~s~~~LsNsTaI~~~f~~i~~ 126 (126)
T PF03953_consen 81 FVDWIPTGFKVGICKVPPYGQPNSDRSGLMLSNSTAIAEVFSRISH 126 (126)
T ss_dssp B-SSSTTCEEEEEESS-STSTTTSSEEEEEEEEEGGGHHHHHHHHH
T ss_pred eeeecCchhhcccccCCCcccCCCcceEEEeCChHHHHHHHHHhcC
Confidence 455555655 67787773 5689999999999999875
No 32
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=78.74 E-value=7.3 Score=33.73 Aligned_cols=37 Identities=27% Similarity=0.299 Sum_probs=31.6
Q ss_pred hhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHH
Q 010957 203 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAAD 239 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~ 239 (496)
.+++.++++..+++.+.=+|+.+++|+-||+ .=.++.
T Consensus 41 ~~~~~~~l~~~i~~~~~~~~vivltDl~GGSp~n~a~~ 78 (116)
T TIGR00824 41 AETLQEKYNAALADLDTEEEVLFLVDIFGGSPYNAAAR 78 (116)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHH
Confidence 6789999999999988889999999999999 554443
No 33
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=78.28 E-value=4.7 Score=34.63 Aligned_cols=34 Identities=29% Similarity=0.280 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhh
Q 010957 203 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAV 236 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl 236 (496)
.+++.+++++.+++-+.-+|+.+++|+.||+ ...
T Consensus 40 ~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp~n~ 74 (116)
T PF03610_consen 40 IEDFEEKLEEAIEELDEGDGVLILTDLGGGSPFNE 74 (116)
T ss_dssp HHHHHHHHHHHHHHCCTTSEEEEEESSTTSHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEeeCCCCccchH
Confidence 6889999999999999999999999999998 443
No 34
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=78.25 E-value=2.8 Score=36.96 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=33.0
Q ss_pred hhhHHHHHHHHHhhcCCCcceEEEEcCCCCchhhHHHHHHHHHHH
Q 010957 203 GEEICERLRFFVEESDHIQGFQFVVDDSGGFSAVAADLLENIADE 247 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~sGl~s~lle~L~dE 247 (496)
.+...++|+..++++|. .|+.+|+|+ ||+-==....+|.+.++
T Consensus 41 ~gt~~~~i~~ai~~~~~-dGVlVltDL-Gssp~n~~~a~e~~~~~ 83 (124)
T PRK14484 41 IGTSFDQIQEAIEKNES-DGVLIFFDL-GSAEMNAEMAIEMLDGE 83 (124)
T ss_pred ccchHHHHHHHHHhcCc-CCeEEEEeC-CChHHHHHHHHHhcCCC
Confidence 66788999999999999 999999999 88722234455666545
No 35
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=77.32 E-value=7.5 Score=33.75 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHH
Q 010957 203 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAA 238 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s 238 (496)
.+++.++|++.+++.+.-+|+.+++|+-||+ .=.+.
T Consensus 40 ~~~~~~~i~~~i~~~~~~~~viil~Dl~GGSp~n~~~ 76 (122)
T cd00006 40 PDDLLEKIKAALAELDSGEGVLILTDLFGGSPNNAAA 76 (122)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeCCCCCHHHHHH
Confidence 6789999999999998889999999999998 43333
No 36
>PF13809 Tubulin_2: Tubulin like
Probab=72.37 E-value=18 Score=37.40 Aligned_cols=40 Identities=23% Similarity=0.169 Sum_probs=33.1
Q ss_pred eEEEEcCCCCc-hhhHHHHHHHHHHHc-----CCcceeEEEecCCC
Q 010957 223 FQFVVDDSGGF-SAVAADLLENIADEY-----ANTPVLLFAVRSPS 262 (496)
Q Consensus 223 fqi~~d~~gG~-sGl~s~lle~L~dEy-----pk~~i~~~~v~p~~ 262 (496)
+.|+.+++||| ||+---++-.||+.+ ....+..|.+.|..
T Consensus 150 V~Vv~SlaGGTGSG~~lDia~~lr~~~~~~~~~~~~i~~~~~lP~~ 195 (345)
T PF13809_consen 150 VFVVGSLAGGTGSGMFLDIAYLLRDILKQPGQDNPRIYGFFVLPDA 195 (345)
T ss_pred EEEEEecCCccchhHHHHHHHHHHHHhhcccCCCceEEEEEECCcc
Confidence 56779999999 999999999999987 24457888888873
No 37
>KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only]
Probab=57.05 E-value=10 Score=39.09 Aligned_cols=43 Identities=21% Similarity=0.332 Sum_probs=30.5
Q ss_pred HHHhhcCCCcceEEEEcCCCCchhhHHHHHHHHHHHcCCcceeEEEe
Q 010957 212 FFVEESDHIQGFQFVVDDSGGFSAVAADLLENIADEYANTPVLLFAV 258 (496)
Q Consensus 212 ~~~EeCD~lqGfqi~~d~~gG~sGl~s~lle~L~dEypk~~i~~~~v 258 (496)
+.++.|..+.||.++.|++||.| .-+=..+. +||+.-.+.|-+
T Consensus 167 ~il~~~~Gf~~v~~avDvGgGiG---~v~k~ll~-~fp~ik~infdl 209 (342)
T KOG3178|consen 167 KILEVYTGFKGVNVAVDVGGGIG---RVLKNLLS-KYPHIKGINFDL 209 (342)
T ss_pred hhhhhhcccccCceEEEcCCcHh---HHHHHHHH-hCCCCceeecCH
Confidence 34677778888999999998874 33333344 899877666654
No 38
>PRK15088 PTS system mannose-specific transporter subunits IIAB; Provisional
Probab=54.90 E-value=31 Score=35.47 Aligned_cols=39 Identities=26% Similarity=0.397 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHH
Q 010957 203 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLL 241 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~ll 241 (496)
.+++.++++..+++.+.=.|+.+++|+-||+ .=.+..++
T Consensus 42 ~~~~~~~l~~~i~~~~~~d~vlILtDl~GGSP~N~a~~~~ 81 (322)
T PRK15088 42 AETLIEKYNAQLAKLDTSKGVLFLVDTWGGSPFNAASRIV 81 (322)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHH
Confidence 6889999999999998888999999999999 54444333
No 39
>TIGR02364 dha_pts dihydroxyacetone kinase, phosphotransfer subunit. In E. coli and many other bacteria, unlike the yeasts and a few bacteria such as Citrobacter freundii, the dihydroxyacetone kinase (also called glycerone kinase) transfers a phosphate from a phosphoprotein rather than from ATP and contains multiple subunits. This protein, which resembles proteins of PTS transport systems, is found with its gene adjacent to
Probab=45.66 E-value=26 Score=30.85 Aligned_cols=30 Identities=17% Similarity=0.168 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHHhhcCC-CcceEEEEcCCCCc
Q 010957 203 GEEICERLRFFVEESDH-IQGFQFVVDDSGGF 233 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~-lqGfqi~~d~~gG~ 233 (496)
.+.+.++|++.+|+++. =.|+.+++|+ ||+
T Consensus 41 ~gt~~~~I~~ai~~~~~~~dgVlvl~DL-Ggs 71 (125)
T TIGR02364 41 LGTSPDKIIEAIEKADNEADGVLIFYDL-GSA 71 (125)
T ss_pred ccchHHHHHHHHHHhcCCCCCEEEEEcC-CCc
Confidence 56788899999999976 8999999999 775
No 40
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=43.22 E-value=16 Score=38.50 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=48.7
Q ss_pred eeeccccccccCCch------hhcCCccCCC--CCcc-------cccccccccccCc--c-hhhHHHHHHHHHhhcCCCc
Q 010957 160 FWTDFSKVHYHPQSL------YELGGLWMDP--QEFD-------NYGIGKDAFSEGF--R-GEEICERLRFFVEESDHIQ 221 (496)
Q Consensus 160 ~WsDf~~~~~hPrS~------~~l~~~~~~~--~~f~-------~y~~G~~~~~~~~--~-~d~~~d~iR~~~EeCD~lq 221 (496)
+|..|.+-||+||++ .+|+...++. .-|+ ..+.|.. |..+. . .+..++.+.+.-.+.+...
T Consensus 19 ~w~~~~~eh~~pR~v~iD~e~~~i~~i~~~~~~~~~~~~~~~~~~~gaGnn-~a~G~~~~g~~~~~~~~d~ir~~~E~cd 97 (379)
T cd02190 19 FWDLALREHLKARAVLIDMEEGVVNEILKGPLRDLFDETQLVTDVSGAGNN-WAVGYHQYGHQYIDSILEKIRKAAEKCD 97 (379)
T ss_pred HHHHHHHhhcCCcceeccCChhHHHHHhcCccccccCcccccccCCCCCCC-ccceeeccchhHHHHHHHHHHHHHhhCc
Confidence 499999999999999 4443322210 0011 1222211 11111 1 2333444555556667777
Q ss_pred ceEEEEcCCCCchhhHHHHHHHHHHHc
Q 010957 222 GFQFVVDDSGGFSAVAADLLENIADEY 248 (496)
Q Consensus 222 Gfqi~~d~~gG~sGl~s~lle~L~dEy 248 (496)
.+|-+.=+.+--||.||.+-..|-+..
T Consensus 98 ~l~gf~i~~sl~GGTGSG~gs~l~e~l 124 (379)
T cd02190 98 SLQSFFILHSLGGGTGSGLGTYVLELL 124 (379)
T ss_pred CcceEEEEeecCCCcchhHHHHHHHHH
Confidence 777777766655777777777776554
No 41
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=36.40 E-value=49 Score=33.17 Aligned_cols=49 Identities=27% Similarity=0.246 Sum_probs=27.8
Q ss_pred hhhHHHH-HHHHHhhcCCCcceEEEEcCCCCchhhHHHHHHHHHHHcCCcceeEEE
Q 010957 203 GEEICER-LRFFVEESDHIQGFQFVVDDSGGFSAVAADLLENIADEYANTPVLLFA 257 (496)
Q Consensus 203 ~d~~~d~-iR~~~EeCD~lqGfqi~~d~~gG~sGl~s~lle~L~dEypk~~i~~~~ 257 (496)
.++.+.+ +...+|+++-=.|= =+.|++.||||++-.+. ..| +..+....
T Consensus 43 Le~AQ~~k~~~~~~~~~l~~G~-~vLDiGcGwG~~~~~~a----~~~-g~~v~git 92 (273)
T PF02353_consen 43 LEEAQERKLDLLCEKLGLKPGD-RVLDIGCGWGGLAIYAA----ERY-GCHVTGIT 92 (273)
T ss_dssp HHHHHHHHHHHHHTTTT--TT--EEEEES-TTSHHHHHHH----HHH---EEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCCC-EEEEeCCCccHHHHHHH----HHc-CcEEEEEE
Confidence 5555444 77888888755565 45599999998765544 556 34444433
No 42
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=35.44 E-value=39 Score=29.99 Aligned_cols=25 Identities=8% Similarity=0.377 Sum_probs=22.0
Q ss_pred hhhHHHHHHHHHHHcCC-cceeEEEe
Q 010957 234 SAVAADLLENIADEYAN-TPVLLFAV 258 (496)
Q Consensus 234 sGl~s~lle~L~dEypk-~~i~~~~v 258 (496)
||+|..+++.||.++|. ..++..+.
T Consensus 10 GGiG~~iv~~lr~~~~~~~eI~AlGT 35 (131)
T PF12953_consen 10 GGIGKQIVEKLRKELPEEVEIIALGT 35 (131)
T ss_pred ChhHHHHHHHHHHhCCCCcEEEEEeh
Confidence 79999999999999998 77777764
No 43
>COG2893 ManX Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]
Probab=31.31 E-value=1.1e+02 Score=27.71 Aligned_cols=45 Identities=22% Similarity=0.225 Sum_probs=31.8
Q ss_pred hhhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHHHHHcCCc
Q 010957 203 GEEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENIADEYANT 251 (496)
Q Consensus 203 ~d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L~dEypk~ 251 (496)
.+.+.+.+...++.=|+=.|+.+++|+-||+ .=.+++++ .+.|.+
T Consensus 42 ~~~l~~~~~~~~~~~d~~eevl~ltDl~GGSP~N~A~~l~----~~~~~~ 87 (143)
T COG2893 42 EDLLTKQIAAAIAALDSGEGVLFLTDLFGGSPFNVASRLA----MEGPRV 87 (143)
T ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEecCCCCHhHHHHHHH----hhCCCc
Confidence 4445555666666667779999999999999 76666665 445554
No 44
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=30.44 E-value=1.4e+02 Score=25.26 Aligned_cols=54 Identities=19% Similarity=0.277 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHhhcCCCcceEEEEcCCCCchhh-----H---HHHHHHHHHHcCCcceeEEE
Q 010957 204 EEICERLRFFVEESDHIQGFQFVVDDSGGFSAV-----A---ADLLENIADEYANTPVLLFA 257 (496)
Q Consensus 204 d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~sGl-----~---s~lle~L~dEypk~~i~~~~ 257 (496)
-.+-+.|+.+++..+-..|-.++.+.++.+.++ + -..+++|...||++..+.++
T Consensus 10 wnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIG 71 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIG 71 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEe
Confidence 357788999999999999999999986553322 2 34678999999998888777
No 45
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=26.01 E-value=3.4e+02 Score=23.76 Aligned_cols=71 Identities=18% Similarity=0.254 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHhhcCCCcceEEEEcCCCCc-hhhHHHHHHHH----HHHcCCcceeEEEecCCCccccccchhhhHHHHH
Q 010957 204 EEICERLRFFVEESDHIQGFQFVVDDSGGF-SAVAADLLENI----ADEYANTPVLLFAVRSPSSQMNLRSRKQTIFREL 278 (496)
Q Consensus 204 d~~~d~iR~~~EeCD~lqGfqi~~d~~gG~-sGl~s~lle~L----~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~y 278 (496)
.+-.+.+...+.+|| |+.+.+-.--|. +|.--.+++++ ...+.+|++..+++-... .....+...+
T Consensus 58 ~d~~~~~~~~l~~aD---~iI~~sP~y~~~~s~~lK~~lD~~~~~~~~~~~~K~~~~i~~~g~~------~g~~~~~~~l 128 (152)
T PF03358_consen 58 PDDVQELYDKLKEAD---GIIFASPVYNGSVSGQLKNFLDRLSCWFRRALRGKPVAIIAVGGGR------RGGLRALEQL 128 (152)
T ss_dssp SHHHHHHHHHHHHSS---EEEEEEEEBTTBE-HHHHHHHHTHHHTHTTTTTTSEEEEEEEESSS------STTHHHHHHH
T ss_pred cHHHHHHHhceecCC---eEEEeecEEcCcCChhhhHHHHHhccccccccCCCEEEEEEEecCC------cHHHHHHHHH
Confidence 344466667777888 667777766555 99999999999 466678888777775443 2334444445
Q ss_pred HHHhh
Q 010957 279 HDTVS 283 (496)
Q Consensus 279 N~~Ls 283 (496)
..++.
T Consensus 129 ~~~~~ 133 (152)
T PF03358_consen 129 RQILD 133 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 46
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]
Probab=24.35 E-value=1.2e+02 Score=30.69 Aligned_cols=44 Identities=14% Similarity=0.202 Sum_probs=34.4
Q ss_pred HHHHHhhcCCCcceEEEEcCCCCchhhHHHHHHHHHHHcCCcceeEEEe
Q 010957 210 LRFFVEESDHIQGFQFVVDDSGGFSAVAADLLENIADEYANTPVLLFAV 258 (496)
Q Consensus 210 iR~~~EeCD~lqGfqi~~d~~gG~sGl~s~lle~L~dEypk~~i~~~~v 258 (496)
|-+.+++. |+.++..-+.=+||+|+.+.|.|.+++| +++--.++
T Consensus 237 i~~~A~~t----~~IvT~EeHsi~GGlGsaVAEvlse~~p-~~~~riGv 280 (312)
T COG3958 237 ILKAARET----GRIVTAEEHSIIGGLGSAVAEVLSENGP-TPMRRIGV 280 (312)
T ss_pred HHHHHhhc----CcEEEEecceeecchhHHHHHHHHhcCC-cceEEecC
Confidence 44555555 7888877777778899999999999999 66666666
No 47
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=22.74 E-value=2e+02 Score=26.84 Aligned_cols=82 Identities=16% Similarity=0.240 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHhhcCCCcceEEE-EcCCCCchhhHHHHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHh
Q 010957 204 EEICERLRFFVEESDHIQGFQFV-VDDSGGFSAVAADLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTV 282 (496)
Q Consensus 204 d~~~d~iR~~~EeCD~lqGfqi~-~d~~gG~sGl~s~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~L 282 (496)
..+.+.|+..+|+ |+.-+ +...-|+=-.++.++-.|+.+||...+ ..+.|...... +=.+.-.+.
T Consensus 29 ~~L~~~i~~lie~-----G~~~fi~GgalG~D~waae~vl~LK~~yp~ikL--~~v~Pf~~q~~--~W~~~~q~~----- 94 (177)
T PF06908_consen 29 KALKKQIIELIEE-----GVRWFITGGALGVDLWAAEVVLELKKEYPEIKL--ALVLPFENQGN--NWNEANQER----- 94 (177)
T ss_dssp HHHHHHHHHHHTT-----T--EEEE---TTHHHHHHHHHHTTTTT-TT-EE--EEEESSB-TTT--TS-HHHHHH-----
T ss_pred HHHHHHHHHHHHC-----CCCEEEECCcccHHHHHHHHHHHHHhhhhheEE--EEEEcccchhh--cCCHHHHHH-----
Confidence 3455556666664 55444 555577777788999999999996443 44556542211 011111222
Q ss_pred hhhhhcccccEEEEecCC
Q 010957 283 SFSRLASFGKLIVPVGLP 300 (496)
Q Consensus 283 sl~~l~e~sd~~~pl~n~ 300 (496)
+..|.+.||.++.++..
T Consensus 95 -y~~il~~aD~v~~vs~~ 111 (177)
T PF06908_consen 95 -YQSILEQADFVVVVSER 111 (177)
T ss_dssp -HHHHHHH-SEEEESSSS
T ss_pred -HHHHHHhCCEEEEccCC
Confidence 45566788888888764
No 48
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=22.59 E-value=3.6e+02 Score=23.51 Aligned_cols=40 Identities=5% Similarity=0.232 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCcceeEEEecCCCccccccchhhhHHHHHHHHhh
Q 010957 239 DLLENIADEYANTPVLLFAVRSPSSQMNLRSRKQTIFRELHDTVS 283 (496)
Q Consensus 239 ~lle~L~dEypk~~i~~~~v~p~~~~~~~~~~~~~~~~~yN~~Ls 283 (496)
.+++.+++-+|+..++..++.|... .......+.||.++.
T Consensus 68 ~~i~~i~~~~p~~~ii~~~~~p~~~-----~~~~~~~~~~n~~l~ 107 (157)
T cd01833 68 ALIDQMRAANPDVKIIVATLIPTTD-----ASGNARIAEYNAAIP 107 (157)
T ss_pred HHHHHHHHhCCCeEEEEEeCCCCCC-----cchhHHHHHHHHHHH
Confidence 4557777778988888776655431 111344667887654
No 49
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=21.74 E-value=1e+02 Score=23.78 Aligned_cols=24 Identities=17% Similarity=0.463 Sum_probs=20.2
Q ss_pred hhhHHHHHHHHHHHcCCcceeEEE
Q 010957 234 SAVAADLLENIADEYANTPVLLFA 257 (496)
Q Consensus 234 sGl~s~lle~L~dEypk~~i~~~~ 257 (496)
-|+|+.|+..+.++++++.++..+
T Consensus 41 ~Gig~~ll~~~~~~~~~~~i~l~~ 64 (79)
T PF13508_consen 41 KGIGSKLLNYLLEKAKSKKIFLFT 64 (79)
T ss_dssp SSHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCHHHHHHHHHHHHcCCCcEEEEE
Confidence 688999999999999888776554
Done!