Query 010960
Match_columns 496
No_of_seqs 162 out of 926
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 06:31:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010960.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010960hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02230 phosphoinositide phos 100.0 6E-146 1E-150 1179.7 40.8 489 3-496 7-503 (598)
2 PLN02222 phosphoinositide phos 100.0 2E-145 4E-150 1173.8 41.6 484 1-495 1-485 (581)
3 PLN02228 Phosphoinositide phos 100.0 8E-142 2E-146 1143.5 40.6 463 3-495 2-464 (567)
4 KOG0169 Phosphoinositide-speci 100.0 1E-141 3E-146 1144.3 32.2 465 1-496 182-650 (746)
5 PLN02952 phosphoinositide phos 100.0 6E-140 1E-144 1134.5 37.7 484 1-495 14-503 (599)
6 PLN02223 phosphoinositide phos 100.0 2E-130 4E-135 1042.3 35.3 428 10-496 1-442 (537)
7 KOG1265 Phospholipase C [Lipid 100.0 1E-126 3E-131 1025.6 25.4 451 19-475 215-716 (1189)
8 cd08629 PI-PLCc_delta1 Catalyt 100.0 2E-111 4E-116 828.4 21.0 257 108-430 1-258 (258)
9 cd08633 PI-PLCc_eta2 Catalytic 100.0 3E-110 6E-115 817.6 21.0 252 108-430 1-254 (254)
10 cd08630 PI-PLCc_delta3 Catalyt 100.0 3E-110 7E-115 821.7 20.7 256 108-430 1-258 (258)
11 cd08624 PI-PLCc_beta2 Catalyti 100.0 9E-110 2E-114 818.9 21.8 254 108-430 1-261 (261)
12 cd08631 PI-PLCc_delta4 Catalyt 100.0 7E-110 2E-114 818.3 20.8 256 108-430 1-258 (258)
13 cd08595 PI-PLCc_zeta Catalytic 100.0 8E-110 2E-114 817.5 21.1 255 108-430 1-257 (257)
14 cd08632 PI-PLCc_eta1 Catalytic 100.0 7E-110 1E-114 813.5 20.2 251 108-430 1-253 (253)
15 cd08596 PI-PLCc_epsilon Cataly 100.0 2E-109 5E-114 813.0 19.8 249 108-430 1-254 (254)
16 cd08626 PI-PLCc_beta4 Catalyti 100.0 1E-108 3E-113 809.3 20.3 251 108-430 1-257 (257)
17 cd08623 PI-PLCc_beta1 Catalyti 100.0 1E-108 3E-113 809.0 20.4 251 108-430 1-258 (258)
18 cd08593 PI-PLCc_delta Catalyti 100.0 2E-108 5E-113 809.9 20.7 256 108-430 1-257 (257)
19 cd08591 PI-PLCc_beta Catalytic 100.0 4E-108 8E-113 805.8 20.9 251 108-430 1-257 (257)
20 cd08625 PI-PLCc_beta3 Catalyti 100.0 4E-108 9E-113 809.0 21.2 250 109-430 2-258 (258)
21 cd08628 PI-PLCc_gamma2 Catalyt 100.0 2E-107 3E-112 801.0 18.9 253 108-430 1-254 (254)
22 cd08594 PI-PLCc_eta Catalytic 100.0 5E-107 1E-111 784.1 20.0 225 108-430 1-227 (227)
23 cd08597 PI-PLCc_PRIP_metazoa C 100.0 1E-105 3E-110 791.6 20.5 259 108-430 1-260 (260)
24 cd08558 PI-PLCc_eukaryota Cata 100.0 3E-104 7E-109 766.6 20.5 225 108-430 1-226 (226)
25 cd08598 PI-PLC1c_yeast Catalyt 100.0 1E-103 3E-108 764.7 20.6 229 108-429 1-230 (231)
26 cd08627 PI-PLCc_gamma1 Catalyt 100.0 1E-103 2E-108 760.7 20.2 225 109-429 2-228 (229)
27 KOG1264 Phospholipase C [Lipid 100.0 1E-103 2E-108 841.6 21.7 218 38-257 236-457 (1267)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 2E-102 3E-107 755.3 20.1 227 108-430 1-229 (229)
29 cd08599 PI-PLCc_plant Catalyti 100.0 1E-101 3E-106 749.6 20.2 226 108-430 1-228 (228)
30 cd00137 PI-PLCc Catalytic doma 100.0 1.1E-64 2.4E-69 508.8 18.1 251 108-430 1-274 (274)
31 PF00387 PI-PLC-Y: Phosphatidy 100.0 3.8E-47 8.2E-52 335.8 3.2 118 325-443 1-118 (118)
32 smart00149 PLCYc Phospholipase 100.0 3.7E-46 8E-51 327.5 7.4 115 327-442 1-115 (115)
33 smart00148 PLCXc Phospholipase 100.0 5.5E-41 1.2E-45 304.2 13.0 134 109-243 1-135 (135)
34 PF00388 PI-PLC-X: Phosphatidy 100.0 7.1E-38 1.5E-42 286.4 12.1 143 111-254 1-146 (146)
35 cd08589 PI-PLCc_SaPLC1_like Ca 99.9 1E-21 2.2E-26 200.2 12.4 146 109-254 3-209 (324)
36 cd08590 PI-PLCc_Rv2075c_like C 99.8 1.2E-18 2.7E-23 174.8 12.3 143 108-252 3-168 (267)
37 cd08557 PI-PLCc_bacteria_like 99.7 2E-16 4.3E-21 157.2 9.8 144 110-254 4-158 (271)
38 PF09279 EF-hand_like: Phospho 99.5 2.9E-14 6.3E-19 118.3 5.1 81 26-108 1-83 (83)
39 cd08555 PI-PLCc_GDPD_SF Cataly 99.2 3.6E-11 7.8E-16 113.6 10.7 98 122-224 2-109 (179)
40 cd08586 PI-PLCc_BcPLC_like Cat 98.9 5.4E-09 1.2E-13 106.0 9.2 138 111-253 6-148 (279)
41 cd08588 PI-PLCc_At5g67130_like 98.8 1.2E-08 2.6E-13 103.0 9.8 138 111-251 8-153 (270)
42 cd08587 PI-PLCXDc_like Catalyt 97.7 0.00033 7.1E-09 71.3 11.8 136 112-251 6-170 (288)
43 cd08622 PI-PLCXDc_CG14945_like 97.6 0.00045 9.8E-09 70.2 11.3 136 112-252 6-159 (276)
44 cd08616 PI-PLCXD1c Catalytic d 97.3 0.0023 5.1E-08 65.4 11.4 136 112-253 7-175 (290)
45 cd08577 PI-PLCc_GDPD_SF_unchar 96.7 0.0049 1.1E-07 61.0 7.6 97 122-229 4-109 (228)
46 cd08556 GDPD Glycerophosphodie 96.6 0.01 2.2E-07 55.3 8.6 62 133-208 10-71 (189)
47 cd08562 GDPD_EcUgpQ_like Glyce 96.5 0.0073 1.6E-07 58.6 7.6 39 135-174 12-50 (229)
48 cd08582 GDPD_like_2 Glyceropho 96.5 0.012 2.5E-07 57.8 8.9 40 134-174 11-50 (233)
49 PF03009 GDPD: Glycerophosphor 96.5 0.0041 8.8E-08 60.1 5.3 41 134-175 8-48 (256)
50 cd08579 GDPD_memb_like Glycero 96.2 0.012 2.7E-07 57.1 7.0 40 134-174 11-50 (220)
51 cd08563 GDPD_TtGDE_like Glycer 96.2 0.029 6.2E-07 54.9 9.4 40 134-174 13-52 (230)
52 cd08567 GDPD_SpGDE_like Glycer 95.9 0.027 5.8E-07 55.9 8.2 40 135-175 14-53 (263)
53 cd08619 PI-PLCXDc_plant Cataly 95.9 0.043 9.2E-07 56.1 9.2 137 109-254 23-166 (285)
54 cd08565 GDPD_pAtGDE_like Glyce 95.6 0.065 1.4E-06 53.0 9.2 39 135-174 12-50 (235)
55 cd08620 PI-PLCXDc_like_1 Catal 95.6 0.11 2.4E-06 53.2 11.0 139 112-253 6-162 (281)
56 cd08566 GDPD_AtGDE_like Glycer 95.2 0.075 1.6E-06 52.7 8.1 38 136-174 15-52 (240)
57 cd08568 GDPD_TmGDE_like Glycer 95.0 0.11 2.3E-06 50.8 8.5 40 134-174 12-51 (226)
58 cd08564 GDPD_GsGDE_like Glycer 94.9 0.12 2.7E-06 51.7 9.0 39 134-173 18-56 (265)
59 cd05029 S-100A6 S-100A6: S-100 94.9 0.11 2.3E-06 44.0 7.1 62 26-94 11-78 (88)
60 cd08575 GDPD_GDE4_like Glycero 94.4 0.047 1E-06 54.9 4.4 41 135-176 14-54 (264)
61 cd08561 GDPD_cytoplasmic_ScUgp 94.2 0.049 1.1E-06 53.9 4.2 41 134-175 11-51 (249)
62 cd08584 PI-PLCc_GDPD_SF_unchar 94.2 0.19 4.1E-06 48.6 8.0 47 138-188 8-54 (192)
63 PTZ00268 glycosylphosphatidyli 93.6 0.64 1.4E-05 49.4 11.2 107 142-255 90-207 (380)
64 cd08574 GDPD_GDE_2_3_6 Glycero 93.4 0.087 1.9E-06 52.6 4.2 40 135-175 15-54 (252)
65 cd08601 GDPD_SaGlpQ_like Glyce 93.2 0.11 2.3E-06 51.8 4.4 40 135-175 14-53 (256)
66 PRK11143 glpQ glycerophosphodi 93.0 0.13 2.8E-06 54.3 5.0 41 134-175 39-79 (355)
67 cd08612 GDPD_GDE4 Glycerophosp 92.9 0.13 2.8E-06 52.8 4.6 40 135-175 40-79 (300)
68 cd08581 GDPD_like_1 Glyceropho 92.7 0.13 2.8E-06 50.7 4.2 40 135-175 12-51 (229)
69 cd08607 GDPD_GDE5 Glycerophosp 92.7 0.15 3.2E-06 51.7 4.8 49 127-176 12-60 (290)
70 cd08580 GDPD_Rv2277c_like Glyc 92.6 0.17 3.6E-06 51.2 5.0 42 133-175 12-53 (263)
71 cd08600 GDPD_EcGlpQ_like Glyce 92.5 0.15 3.2E-06 52.9 4.6 42 133-175 12-53 (318)
72 cd08573 GDPD_GDE1 Glycerophosp 92.4 0.15 3.3E-06 51.1 4.3 40 134-174 11-50 (258)
73 cd08605 GDPD_GDE5_like_1_plant 92.2 0.16 3.4E-06 51.4 4.2 38 136-174 25-62 (282)
74 cd08606 GDPD_YPL110cp_fungi Gl 91.8 0.17 3.7E-06 51.2 3.9 39 136-175 24-62 (286)
75 cd08559 GDPD_periplasmic_GlpQ_ 91.8 0.17 3.8E-06 51.7 4.0 40 135-175 14-53 (296)
76 cd08571 GDPD_SHV3_plant Glycer 91.8 0.18 3.9E-06 52.0 4.1 40 135-175 14-53 (302)
77 cd08609 GDPD_GDE3 Glycerophosp 91.6 0.21 4.5E-06 51.9 4.3 41 134-175 39-79 (315)
78 cd08570 GDPD_YPL206cp_fungi Gl 91.4 0.29 6.2E-06 48.1 4.9 41 134-175 11-51 (234)
79 PRK09454 ugpQ cytoplasmic glyc 91.3 0.21 4.6E-06 49.6 4.0 41 134-175 20-60 (249)
80 cd05030 calgranulins Calgranul 91.0 0.69 1.5E-05 38.8 6.2 62 26-94 9-78 (88)
81 cd08602 GDPD_ScGlpQ1_like Glyc 90.7 0.27 5.9E-06 50.8 4.2 43 133-176 12-54 (309)
82 cd08583 PI-PLCc_GDPD_SF_unchar 90.6 0.36 7.8E-06 47.5 4.8 39 135-174 14-52 (237)
83 cd05024 S-100A10 S-100A10: A s 90.1 1.4 3E-05 37.8 7.2 63 26-94 9-75 (91)
84 cd05022 S-100A13 S-100A13: S-1 89.6 1.2 2.5E-05 37.8 6.4 62 26-94 9-74 (89)
85 cd05026 S-100Z S-100Z: S-100Z 89.5 1.7 3.6E-05 36.8 7.4 64 25-94 10-80 (93)
86 cd08572 GDPD_GDE5_like Glycero 89.5 0.43 9.2E-06 48.9 4.5 42 134-176 20-61 (293)
87 cd08604 GDPD_SHV3_repeat_2 Gly 89.3 0.44 9.6E-06 49.0 4.4 42 133-175 12-53 (300)
88 cd05023 S-100A11 S-100A11: S-1 89.2 1.3 2.8E-05 37.4 6.5 63 26-94 10-79 (89)
89 PF13833 EF-hand_8: EF-hand do 88.9 0.8 1.7E-05 34.2 4.5 50 38-94 3-52 (54)
90 cd08610 GDPD_GDE6 Glycerophosp 88.3 0.57 1.2E-05 48.7 4.4 43 133-176 34-76 (316)
91 cd05025 S-100A1 S-100A1: S-100 88.0 1.8 4E-05 36.2 6.6 64 25-94 9-79 (92)
92 cd00051 EFh EF-hand, calcium b 86.6 3.2 6.8E-05 30.0 6.6 59 27-93 2-62 (63)
93 cd08578 GDPD_NUC-2_fungi Putat 86.2 1 2.2E-05 46.6 4.8 39 137-176 16-54 (300)
94 smart00027 EH Eps15 homology d 86.0 3.2 6.9E-05 35.0 7.0 61 24-94 9-71 (96)
95 COG0584 UgpQ Glycerophosphoryl 85.5 0.87 1.9E-05 45.0 3.8 36 136-172 20-55 (257)
96 cd08585 GDPD_like_3 Glyceropho 85.5 0.83 1.8E-05 45.3 3.7 38 136-175 21-58 (237)
97 cd08613 GDPD_GDE4_like_1 Glyce 84.9 0.96 2.1E-05 47.0 3.9 39 136-175 60-98 (309)
98 cd08560 GDPD_EcGlpQ_like_1 Gly 84.1 1.2 2.5E-05 47.2 4.2 39 135-174 30-69 (356)
99 PF13499 EF-hand_7: EF-hand do 83.9 1 2.2E-05 34.8 2.8 59 27-93 2-66 (66)
100 cd08608 GDPD_GDE2 Glycerophosp 83.6 1.3 2.8E-05 46.8 4.3 40 135-175 15-54 (351)
101 PTZ00183 centrin; Provisional 83.4 5.5 0.00012 35.6 7.8 65 23-95 88-154 (158)
102 PTZ00184 calmodulin; Provision 82.4 5.2 0.00011 35.1 7.2 65 23-95 82-148 (149)
103 cd05027 S-100B S-100B: S-100B 82.0 6.2 0.00013 33.2 7.0 63 26-94 9-78 (88)
104 PF01023 S_100: S-100/ICaBP ty 80.4 2.1 4.5E-05 31.6 3.2 27 26-52 7-37 (44)
105 cd00052 EH Eps15 homology doma 79.9 8.4 0.00018 29.3 6.7 57 28-94 2-60 (67)
106 cd00213 S-100 S-100: S-100 dom 79.4 8.7 0.00019 31.5 7.1 65 24-94 7-78 (88)
107 cd05031 S-100A10_like S-100A10 77.7 8.4 0.00018 32.3 6.5 64 25-94 8-78 (94)
108 KOG2258 Glycerophosphoryl dies 76.8 3.5 7.7E-05 43.3 4.8 40 135-175 82-121 (341)
109 PF05386 TEP1_N: TEP1 N-termin 76.7 0.64 1.4E-05 31.4 -0.5 14 194-207 8-21 (30)
110 cd08621 PI-PLCXDc_like_2 Catal 71.3 23 0.0005 36.6 9.1 92 112-204 6-113 (300)
111 cd08603 GDPD_SHV3_repeat_1 Gly 71.2 4.8 0.0001 41.7 4.1 40 135-175 14-55 (299)
112 KOG4306 Glycosylphosphatidylin 65.5 41 0.00088 35.0 9.3 94 143-244 73-173 (306)
113 PF09069 EF-hand_3: EF-hand; 64.6 13 0.00029 31.7 4.8 62 27-96 5-76 (90)
114 PTZ00183 centrin; Provisional 62.4 30 0.00065 30.7 7.1 62 25-94 17-80 (158)
115 cd04031 C2A_RIM1alpha C2 domai 61.1 12 0.00025 32.5 4.0 29 461-495 15-43 (125)
116 PF05517 p25-alpha: p25-alpha 60.8 17 0.00036 33.9 5.2 62 27-94 1-68 (154)
117 cd04032 C2_Perforin C2 domain 60.7 11 0.00024 33.8 3.9 29 461-496 27-55 (127)
118 cd04030 C2C_KIAA1228 C2 domain 58.7 12 0.00027 32.5 3.8 30 461-496 15-44 (127)
119 PTZ00184 calmodulin; Provision 57.8 43 0.00093 29.2 7.2 62 25-94 11-74 (149)
120 cd04035 C2A_Rabphilin_Doc2 C2 57.2 14 0.0003 32.1 3.8 29 461-495 14-42 (123)
121 PF00036 EF-hand_1: EF hand; 56.5 13 0.00028 24.8 2.6 26 26-51 1-28 (29)
122 PF13405 EF-hand_6: EF-hand do 54.7 13 0.00028 24.7 2.5 26 26-51 1-28 (31)
123 KOG0027 Calmodulin and related 50.4 58 0.0013 29.6 6.9 63 24-94 84-148 (151)
124 PRK07259 dihydroorotate dehydr 50.2 47 0.001 33.8 6.9 79 130-221 95-180 (301)
125 smart00054 EFh EF-hand, calciu 49.9 22 0.00047 21.1 2.9 26 26-51 1-28 (29)
126 COG5126 FRQ1 Ca2+-binding prot 49.4 47 0.001 31.4 6.2 66 21-94 88-155 (160)
127 cd08386 C2A_Synaptotagmin-7 C2 49.1 23 0.0005 30.7 3.9 29 461-495 15-43 (125)
128 PF11422 IBP39: Initiator bind 45.5 30 0.00065 33.2 4.2 100 24-128 18-139 (181)
129 PF08726 EFhand_Ca_insen: Ca2+ 44.4 14 0.00031 30.0 1.6 33 21-53 2-35 (69)
130 cd02810 DHOD_DHPD_FMN Dihydroo 44.3 90 0.002 31.4 7.9 90 129-229 101-195 (289)
131 COG5126 FRQ1 Ca2+-binding prot 43.2 87 0.0019 29.6 6.9 63 23-94 15-82 (160)
132 cd08385 C2A_Synaptotagmin-1-5- 42.4 35 0.00075 29.6 4.0 29 461-495 15-43 (124)
133 cd08387 C2A_Synaptotagmin-8 C2 42.3 34 0.00074 29.7 3.9 29 461-495 15-43 (124)
134 cd08388 C2A_Synaptotagmin-4-11 40.8 33 0.00071 30.4 3.6 29 461-495 15-44 (128)
135 KOG0027 Calmodulin and related 40.3 1E+02 0.0022 28.0 6.9 65 25-97 8-74 (151)
136 cd08521 C2A_SLP C2 domain firs 40.2 36 0.00078 29.2 3.7 29 461-495 13-42 (123)
137 cd04020 C2B_SLP_1-2-3-4 C2 dom 36.8 44 0.00095 31.1 3.9 29 461-495 26-54 (162)
138 cd00252 SPARC_EC SPARC_EC; ext 36.5 1.4E+02 0.0031 26.5 6.9 60 23-94 46-107 (116)
139 PTZ00466 actin-like protein; P 36.2 44 0.00096 35.5 4.3 45 181-225 86-135 (380)
140 PF09441 Abp2: ARS binding pro 34.8 91 0.002 29.6 5.5 86 9-99 20-125 (175)
141 cd04029 C2A_SLP-4_5 C2 domain 34.8 49 0.0011 29.2 3.7 30 461-496 14-44 (125)
142 PRK09071 hypothetical protein; 34.2 30 0.00064 36.2 2.6 60 129-188 48-132 (323)
143 cd08390 C2A_Synaptotagmin-15-1 33.8 59 0.0013 28.0 4.0 29 461-495 13-42 (123)
144 PTZ00281 actin; Provisional 33.7 48 0.001 35.0 4.1 47 180-226 79-131 (376)
145 cd08389 C2A_Synaptotagmin-14_1 33.6 49 0.0011 29.1 3.5 28 461-495 15-43 (124)
146 PTZ00452 actin; Provisional 32.8 55 0.0012 34.7 4.3 46 180-225 78-129 (375)
147 PF00022 Actin: Actin; InterP 32.0 52 0.0011 34.4 4.0 45 181-225 73-123 (393)
148 cd08680 C2_Kibra C2 domain fou 31.6 56 0.0012 29.1 3.5 30 461-496 13-42 (124)
149 cd08393 C2A_SLP-1_2 C2 domain 30.9 63 0.0014 28.4 3.8 30 461-496 14-44 (125)
150 smart00268 ACTIN Actin. ACTIN 30.6 59 0.0013 33.9 4.1 45 181-225 74-124 (373)
151 KOG0034 Ca2+/calmodulin-depend 30.1 1.8E+02 0.004 28.0 7.1 60 23-94 28-94 (187)
152 PF12738 PTCB-BRCT: twin BRCT 29.2 40 0.00088 25.8 2.0 29 122-154 32-60 (63)
153 PLN02591 tryptophan synthase 28.8 43 0.00093 33.8 2.6 94 135-231 11-114 (250)
154 PF14788 EF-hand_10: EF hand; 28.4 96 0.0021 23.8 3.8 46 40-93 2-47 (51)
155 cd08392 C2A_SLP-3 C2 domain fi 28.1 73 0.0016 28.4 3.7 30 461-496 14-44 (128)
156 PTZ00004 actin-2; Provisional 27.5 83 0.0018 33.2 4.6 46 181-226 80-131 (378)
157 PF00977 His_biosynth: Histidi 26.9 1E+02 0.0022 30.3 4.8 40 150-193 123-162 (229)
158 cd00012 ACTIN Actin; An ubiqui 24.4 88 0.0019 32.6 4.1 45 181-225 74-124 (371)
159 cd08676 C2A_Munc13-like C2 dom 24.2 87 0.0019 29.1 3.6 29 461-495 27-55 (153)
160 PF07942 N2227: N2227-like pro 24.1 70 0.0015 32.7 3.1 60 114-193 169-236 (270)
161 PF13202 EF-hand_5: EF hand; P 23.7 78 0.0017 20.2 2.2 23 27-49 1-25 (25)
162 PF04920 DUF656: Family of unk 23.4 36 0.00078 29.9 0.8 20 163-182 12-32 (126)
163 KOG1761 Signal recognition par 22.9 1.1E+02 0.0024 27.4 3.7 44 141-202 15-60 (116)
164 KOG0034 Ca2+/calmodulin-depend 22.7 3.1E+02 0.0067 26.5 7.1 66 26-94 105-174 (187)
165 PRK05395 3-dehydroquinate dehy 22.5 47 0.001 31.0 1.4 65 133-208 22-102 (146)
166 PF10223 DUF2181: Uncharacteri 22.2 2.3E+02 0.0049 28.7 6.2 52 137-188 12-68 (244)
167 PF13833 EF-hand_8: EF-hand do 21.2 1.2E+02 0.0027 22.1 3.3 30 22-51 22-53 (54)
168 KOG2421 Predicted starch-bindi 21.1 21 0.00046 38.7 -1.4 61 109-173 309-382 (417)
169 PF11478 Tachystatin_B: Antimi 20.4 37 0.00079 24.1 0.2 12 142-153 1-12 (42)
170 PF05673 DUF815: Protein of un 20.3 2.1E+02 0.0045 29.1 5.5 83 122-227 51-135 (249)
No 1
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=5.8e-146 Score=1179.65 Aligned_cols=489 Identities=55% Similarity=0.971 Sum_probs=410.8
Q ss_pred CcceeeeeeeecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHhhhhh-hhhh
Q 010960 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-KASKEDAQAIIDSLRELKH-LNIF 79 (496)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~lf~~y~~~-~~lt~~~l~~FL~~eQ~e~-~~~~~~~~~li~~~e~~~~-~~~~ 79 (496)
|+|||||+||.|+|+.+.+.+|+||.+||.+|+++ ++||+++|.+||+++|+++ ..+++.|++||++|+..++ ..+.
T Consensus 7 m~~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 86 (598)
T PLN02230 7 MGSYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKF 86 (598)
T ss_pred CccceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccc
Confidence 67999999999999999999999999999999877 9999999999999999754 4678999999999985433 2233
Q ss_pred ccCCCCHHHHHHHhcCCC-CCCCCCCCCccCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEee
Q 010960 80 QRRGLNLEAFFKYLFGDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (496)
Q Consensus 80 ~~~~lt~~gF~~~L~s~~-n~~~~~~~~v~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcW 158 (496)
.++.|+++||++||+|.+ |++. +..|+|||++|||||||||||||||+|+||.|.||+|+|++||++||||||||||
T Consensus 87 ~~~~~~~~~F~~yL~s~~~~~~~--~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 164 (598)
T PLN02230 87 TRRNLTLDDFNYYLFSTDLNPPI--ADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLW 164 (598)
T ss_pred cccccCHHHHHHHHcCcccCCcc--cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEecc
Confidence 456899999999999854 4444 3579999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 010960 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (496)
Q Consensus 159 dG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~~~~l 238 (496)
||++ +||+|+||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||++||||+|+.++.+....|
T Consensus 165 dg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~l 243 (598)
T PLN02230 165 PRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEF 243 (598)
T ss_pred CCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCCC
Confidence 9876 689999999999999999999999999999999999999999999999999999999999999999877667899
Q ss_pred CChhhccCcEEEecCCCCchhhHHHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCC-CC-CCCCCCC--CCcc
Q 010960 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD-DF-DGGVDND--EEDS 314 (496)
Q Consensus 239 PSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~--~~~~ 314 (496)
|||++||||||||+|++++.++.....+. .+...+ ..++++.|+.+...+.....+..... +. +....++ .+..
T Consensus 244 psP~~Lk~kilik~Kk~~~~~e~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 321 (598)
T PLN02230 244 PSPEELKEKILISTKPPKEYLEANDAKEK-DNGEKG-KDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCE 321 (598)
T ss_pred CChHHHcCCEEEEecCCcccccccccccc-cccccc-cccchhhhccccccccccccccccccccccccccchhcccccc
Confidence 99999999999999998765443321110 001111 12223334443332222111101000 00 0000000 0011
Q ss_pred ccccccccchhhhcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCC
Q 010960 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (496)
Q Consensus 315 ~~~~~~~~~~els~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSS 394 (496)
..+....++++|++||+|+.+++++++...++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||
T Consensus 322 ~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdSS 401 (598)
T PLN02230 322 SDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSS 401 (598)
T ss_pred ccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCCC
Confidence 11223457899999999999999999988887777778899999999999999999999999999999999999999999
Q ss_pred CCCccccccccceeeeecccCCCcccccccccccccCceeeeecCCcccCCCCCCcccCCCCCCCcceEEEEEEEecCCC
Q 010960 395 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 474 (496)
Q Consensus 395 N~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~p~~~~L~v~viSGq~~ 474 (496)
||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+.++.++.|||....+++++|+|+|||||||
T Consensus 402 NynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~~~~L~V~VisGq~~ 481 (598)
T PLN02230 402 NYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDGW 481 (598)
T ss_pred CCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCcCcEEEEEEEEccCc
Confidence 99999999999999999999999999999999999999999999999999766556899998777789999999999999
Q ss_pred CCCCCCCcccccCCCCceEecC
Q 010960 475 YYDFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~ 496 (496)
..++++++++.+++||+||+|.
T Consensus 482 ~l~~~k~~~~~~s~~DpyV~Ve 503 (598)
T PLN02230 482 LLDFKKTHFDSYSPPDFFVRVG 503 (598)
T ss_pred cCCCccccCCCCCCCCceEEEE
Confidence 9999999999999999999983
No 2
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=2e-145 Score=1173.84 Aligned_cols=484 Identities=71% Similarity=1.226 Sum_probs=413.3
Q ss_pred CCCcceeeeeeeecccCCcCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhc
Q 010960 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ 80 (496)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~lf~~y~~~~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~ 80 (496)
|++++||||+||.|+|+.....+|+||..||.+|++++.||.++|.+||+++|++..++.+.|.+||++|+.. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~-----~~ 75 (581)
T PLN02222 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LH 75 (581)
T ss_pred CCccceeEEEEeccccccccCCCcHHHHHHHHHhcCCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh-----hh
Confidence 7899999999999999999999999999999999877999999999999999999888999999999998632 13
Q ss_pred cCCCCHHHHHHHhcCCCCCCCCCCCCccCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecC
Q 010960 81 RRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPN 160 (496)
Q Consensus 81 ~~~lt~~gF~~~L~s~~n~~~~~~~~v~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG 160 (496)
+++|+++||++||+|++|.++. +..|+|||++|||||||||||||||+|+||.|.||+|+|++||++||||||||||||
T Consensus 76 ~~~~~~~gF~~yL~s~~n~~~~-~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 154 (581)
T PLN02222 76 RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPN 154 (581)
T ss_pred ccCcCHHHHHHHhcCCCCCCCc-cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 4689999999999999999985 467999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCC
Q 010960 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239 (496)
Q Consensus 161 ~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~-~~~~~lP 239 (496)
+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||++||||+|+.++. +....||
T Consensus 155 ~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lp 234 (581)
T PLN02222 155 SDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234 (581)
T ss_pred CCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCC
Confidence 887778999999999999999999999999999999999999999999999999999999999999999874 4467999
Q ss_pred ChhhccCcEEEecCCCCchhhHHHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccc
Q 010960 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQ 319 (496)
Q Consensus 240 SP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (496)
||++||||||||+|++++.++.... +....+....++..+|.+.++......+.++.+. +.+..++++++..+.+
T Consensus 235 sP~~Lk~kilik~K~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 309 (581)
T PLN02222 235 SPNSLKKRIIISTKPPKEYKEGKDD----EVVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDS-NGDDDDDDDDGEDKSK 309 (581)
T ss_pred ChHHHCCCEEEEecCCccccccccc----cccccccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 9999999999999998755433210 0011111112223344444433222111111100 0000011112222334
Q ss_pred cccchhhhcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCcc
Q 010960 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPL 399 (496)
Q Consensus 320 ~~~~~els~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~ 399 (496)
....+++++|++++.+++++++...++..|..++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+
T Consensus 310 ~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~ 389 (581)
T PLN02222 310 KNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPL 389 (581)
T ss_pred cccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCCCCch
Confidence 45678999999999999888877666666667789999999999999999999999999999999999999999999999
Q ss_pred ccccccceeeeecccCCCcccccccccccccCceeeeecCCcccCCCCCCcccCCCCCCCcceEEEEEEEecCCCCCCCC
Q 010960 400 IGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFP 479 (496)
Q Consensus 400 ~~W~~G~QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~p~~~~L~v~viSGq~~~~~~~ 479 (496)
.||++|||||||||||+|++||||+|||+.||+|||||||++||+.....+.|||....|++++|+|+|||||||+-++.
T Consensus 390 ~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~l~~~ 469 (581)
T PLN02222 390 VGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFR 469 (581)
T ss_pred hHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEEEEEEEcccccCCCC
Confidence 99999999999999999999999999999999999999999999876544579999888888999999999999998899
Q ss_pred CCcccccCCCCceEec
Q 010960 480 HTHFDAYSPPDFYARV 495 (496)
Q Consensus 480 ~~~~~~~~~~~~~~~~ 495 (496)
+++++.+++||+||+|
T Consensus 470 ~~~~~~~~~~dpyV~V 485 (581)
T PLN02222 470 HTHFDQYSPPDFYTRV 485 (581)
T ss_pred ccccCCCCCCCeeEEE
Confidence 9999999999999998
No 3
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=7.5e-142 Score=1143.51 Aligned_cols=463 Identities=55% Similarity=0.958 Sum_probs=398.1
Q ss_pred CcceeeeeeeecccCCcCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccC
Q 010960 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRR 82 (496)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~lf~~y~~~~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~ 82 (496)
+++|+||+||.|+|+.....+|+||..||.+|++++.|+.++|.+||+++|++...+.+.|.+||++|+..+.. ..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~--~~~~ 79 (567)
T PLN02228 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVF--HHHG 79 (567)
T ss_pred CccceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhh--cccC
Confidence 58999999999999999999999999999999977899999999999999999888899999999999843211 1235
Q ss_pred CCCHHHHHHHhcCCCCCCCCCCCCccCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCC
Q 010960 83 GLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162 (496)
Q Consensus 83 ~lt~~gF~~~L~s~~n~~~~~~~~v~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~ 162 (496)
.|+++||++||+|.+|.+++.+..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++
T Consensus 80 ~~~~~gF~~yl~s~~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~ 159 (567)
T PLN02228 80 LVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPS 159 (567)
T ss_pred ccCHHHHHHHhcCcccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCC
Confidence 79999999999999999987777899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 010960 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (496)
Q Consensus 163 ~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~~~~lPSP~ 242 (496)
+++||||||||||++|+|+|||+||++|||++|+|||||||||||+.+||.+||+||++||||+|+.++.+....||||+
T Consensus 160 ~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~lpsP~ 239 (567)
T PLN02228 160 GNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSPE 239 (567)
T ss_pred CCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCCCChH
Confidence 77899999999999999999999999999999999999999999999999999999999999999998877678999999
Q ss_pred hccCcEEEecCCCCchhhHHHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 010960 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (496)
Q Consensus 243 ~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (496)
+||||||||+|+++...+.+... +. ...+.++..+.. . .+.. .......+.....
T Consensus 240 ~Lk~kilik~Kk~~~~~~~~~~~----~~--~~~~~~~~~~~~-~-------------~~~~-----~~~~~~~~~~~~~ 294 (567)
T PLN02228 240 ELKNKILISTKPPKEYLESKTVQ----TT--RTPTVKETSWKR-V-------------ADAE-----NKILEEYKDEESE 294 (567)
T ss_pred HHCCCEEEEecCCcccccccccc----cc--cccccccccccc-c-------------ccch-----hhccccccccchh
Confidence 99999999999876433221100 00 000000000000 0 0000 0000000112235
Q ss_pred chhhhcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccc
Q 010960 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (496)
Q Consensus 323 ~~els~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W 402 (496)
+++|++|++++..++++++.......+...+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||
T Consensus 295 ~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W 374 (567)
T PLN02228 295 AVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGW 374 (567)
T ss_pred hhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHh
Confidence 68899999999887766666544444555678999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeecccCCCcccccccccccccCceeeeecCCcccCCCCCCcccCCCCCCCcceEEEEEEEecCCCCCCCCCCc
Q 010960 403 SHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTH 482 (496)
Q Consensus 403 ~~G~QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~p~~~~L~v~viSGq~~~~~~~~~~ 482 (496)
++|||||||||||+|++||||+|||+.||+|||||||++||+. +..|||....|++.+|+|+|||||+|+-++..++
T Consensus 375 ~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~---~~~f~p~~~~p~~~~L~I~ViSGq~l~lp~~~~~ 451 (567)
T PLN02228 375 THGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDE---HTLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTH 451 (567)
T ss_pred cCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhccc---ccccCCccCCCcCceEEEEEEECCccCCCCCCCC
Confidence 9999999999999999999999999999999999999999986 3479999888888899999999999998888888
Q ss_pred ccccCCCCceEec
Q 010960 483 FDAYSPPDFYARV 495 (496)
Q Consensus 483 ~~~~~~~~~~~~~ 495 (496)
++.+++||+||+|
T Consensus 452 ~~~~~~~DpyV~V 464 (567)
T PLN02228 452 FDQYSPPDFFVKI 464 (567)
T ss_pred CCCCCCCCcEEEE
Confidence 8999999999998
No 4
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-141 Score=1144.28 Aligned_cols=465 Identities=46% Similarity=0.735 Sum_probs=403.6
Q ss_pred CCCcceeeeeeeecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhh
Q 010960 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIF 79 (496)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~lf~~y~~~-~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~ 79 (496)
+.+++||+|+|++++|.-. .++||||+++|.+|+.+ ++|+.++|.+||+.+|++..++.+.|++||++|+..++ ..
T Consensus 182 ~~~~~~k~~~~~~~~~~~~-~~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~--~~ 258 (746)
T KOG0169|consen 182 DNSQTGKLEEEEFVKFRKE-LTKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE--FR 258 (746)
T ss_pred HhhccceehHHHHHHHHHh-hccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh--cc
Confidence 4689999999999998665 55667999999999987 99999999999999999999999999999999996554 22
Q ss_pred ccCCCCHHHHHHHhcCCCCCCCCC-CCCccCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEee
Q 010960 80 QRRGLNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (496)
Q Consensus 80 ~~~~lt~~gF~~~L~s~~n~~~~~-~~~v~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcW 158 (496)
..+.|++|||++||+|..+.++++ |..|||||+||||||||+||||||||||||.|+||+++||+||++||||||||||
T Consensus 259 ~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred ccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 345699999999999999999954 6899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCC
Q 010960 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKE 237 (496)
Q Consensus 159 dG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~-~~~~ 237 (496)
||++ +||||||||||||+|.|++||+||++|||.+|+|||||||||||+++||++||++|++||||+||.++.+ ..+.
T Consensus 339 dg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~ 417 (746)
T KOG0169|consen 339 DGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKE 417 (746)
T ss_pred cCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcccc
Confidence 9987 6899999999999999999999999999999999999999999999999999999999999999998865 5899
Q ss_pred CCChhhccCcEEEecCCCCchhhHHHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccc
Q 010960 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDK 317 (496)
Q Consensus 238 lPSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (496)
||||++||||||||+|+++..+.... .++.+......+.+.+...+. ..+......+
T Consensus 418 lPSPe~LK~KILik~Kk~~~~~~~~~---------------------~~~~~~~~~d~~~~~e~s~e~--~~~~~~~~~~ 474 (746)
T KOG0169|consen 418 LPSPEELKNKILIKGKKLKELLEADS---------------------KEPSSFEVTDEDEDKESSTEN--DKSETDGQKK 474 (746)
T ss_pred CcCHHHHhcCEEEecCCCCccccccc---------------------ccccccccccccccccccccc--cccccccccc
Confidence 99999999999999999876543211 000000000000000000000 0000111122
Q ss_pred cccccchhhhcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCC
Q 010960 318 SQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 397 (496)
Q Consensus 318 ~~~~~~~els~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~ 397 (496)
.+..+++||++||+|+.+++++++...++.+ ++++++||||++|.++++..+.+|++||+++|+||||+|+|+||||||
T Consensus 475 ~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~dSSNyn 553 (746)
T KOG0169|consen 475 SRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVDSSNYN 553 (746)
T ss_pred hhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccCCCCCC
Confidence 2336899999999999999999988887754 678899999999999999999999999999999999999999999999
Q ss_pred ccccccccceeeeecccCCCcccccccccccccCceeeeecCCcccCCCCCCcccCCCCCC-CcceEEEEEEEecCCCCC
Q 010960 398 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL-PAKKTLKVTVYMGEGWYY 476 (496)
Q Consensus 398 P~~~W~~G~QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~-p~~~~L~v~viSGq~~~~ 476 (496)
|+.||++|||||||||||+|++||||+|||+.||||||||||.+||++ ..+|+|...+ |++++|+|+|||||||..
T Consensus 554 Pq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~---~~~F~P~~~~~~~~~tL~IkI~sGq~~~~ 630 (746)
T KOG0169|consen 554 PQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDS---GSTFDPKSNLPPVKKTLKIKIISGQGWLP 630 (746)
T ss_pred hHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCC---CCccCCCCCCCCCCceeEEEEEecCcccC
Confidence 999999999999999999999999999999999999999999999995 3589997774 455699999999999999
Q ss_pred CCCCCcccccCCCCceEecC
Q 010960 477 DFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~ 496 (496)
+|++++++.+++|++||+|.
T Consensus 631 ~~~~~~~~~~~dP~v~VeI~ 650 (746)
T KOG0169|consen 631 DFGKTKFGEISDPDVYVEIA 650 (746)
T ss_pred CCCCCcccccCCCCEEEEEc
Confidence 99999999999999999984
No 5
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=6.3e-140 Score=1134.45 Aligned_cols=484 Identities=61% Similarity=1.049 Sum_probs=403.2
Q ss_pred CCCcceeeeeeeecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhh-hhh
Q 010960 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKH-LNI 78 (496)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~lf~~y~~~-~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~-~~~ 78 (496)
|...+|++|.||.|+++.+.+++|+||..||.+|+++ +.||+++|.+||+++|++..++.++|++||++|..... ..+
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~ 93 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTR 93 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccc
Confidence 3456899999999999999999999999999999987 89999999999999999988899999999998863322 223
Q ss_pred hccCCCCHHHHHHHhcC-CCCCCCCCCCCccCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEe
Q 010960 79 FQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI 157 (496)
Q Consensus 79 ~~~~~lt~~gF~~~L~s-~~n~~~~~~~~v~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDc 157 (496)
+.+..|+++||++||+| +.|.+.. ..|+|||++|||||||||||||||+|+||.|+||+++|++||++|||||||||
T Consensus 94 ~~~~~l~~~~F~~~l~s~~~~~p~~--~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~ 171 (599)
T PLN02952 94 YTRHGLNLDDFFHFLLYDDLNGPIT--PQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDL 171 (599)
T ss_pred ccccCcCHHHHHHHHcCcccccccc--ccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEe
Confidence 34567999999999997 4666553 57999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCC
Q 010960 158 WPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKE 237 (496)
Q Consensus 158 WdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~~~~ 237 (496)
|||++++||+||||||||++|+|+|||+||++|||++|+||||||||||||++||.+||+||+++|||+|+.|+.+....
T Consensus 172 wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~ 251 (599)
T PLN02952 172 WPGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251 (599)
T ss_pred ecCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCC
Confidence 99998788999999999999999999999999999999999999999999999999999999999999999987666789
Q ss_pred CCChhhccCcEEEecCCCCchhhHHHhhhhhcc---ccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcc
Q 010960 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKEND---SQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDS 314 (496)
Q Consensus 238 lPSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (496)
||||++||||||||+|+++..++.+.......+ ...+...++++ .+...+....... +. +.. .+.+..
T Consensus 252 lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~-~~~--~~~~~~ 322 (599)
T PLN02952 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESMLFEQ---EA-DSR--SDSDQD 322 (599)
T ss_pred CCChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---ccccccccccccc---cc-ccc--ccccch
Confidence 999999999999999998765443211000000 00000000000 0000000000000 00 000 000001
Q ss_pred ccccccccchhhhcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCC
Q 010960 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (496)
Q Consensus 315 ~~~~~~~~~~els~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSS 394 (496)
+.+......+++++|++++.+++++.+.+.+...+.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dSs 402 (599)
T PLN02952 323 DNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSS 402 (599)
T ss_pred hhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcCC
Confidence 11223345789999999999988877766665555667889999999999999999999999999999999999999999
Q ss_pred CCCccccccccceeeeecccCCCcccccccccccccCceeeeecCCcccCCCCCCcccCCCCCCCcceEEEEEEEecCCC
Q 010960 395 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGW 474 (496)
Q Consensus 395 N~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~p~~~~L~v~viSGq~~ 474 (496)
||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+.++.+..|||....|++++|+|+|||||||
T Consensus 403 Ny~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~VisGq~l 482 (599)
T PLN02952 403 NYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDGW 482 (599)
T ss_pred CCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCccceEEEEEEECccc
Confidence 99999999999999999999999999999999999999999999999998765566899999888889999999999999
Q ss_pred CCCCCCCcccccCCCCceEec
Q 010960 475 YYDFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~ 495 (496)
+.++.++++|.+++||+||+|
T Consensus 483 ~lp~~~~~~~~~~~~D~yV~V 503 (599)
T PLN02952 483 RLDFSHTHFDSYSPPDFYTKM 503 (599)
T ss_pred CCCCccccCCccCCCCceEEE
Confidence 988888999999999999997
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=2e-130 Score=1042.31 Aligned_cols=428 Identities=40% Similarity=0.717 Sum_probs=361.9
Q ss_pred eeeecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHHhhhhh-hhhh-ccCC
Q 010960 10 FCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFL---IEVQKEDKASKEDAQAIIDSLRELKH-LNIF-QRRG 83 (496)
Q Consensus 10 ~~~~~~~~~~~~~~r~ei~~lf~~y~~~-~~lt~~~l~~FL---~~eQ~e~~~~~~~~~~li~~~e~~~~-~~~~-~~~~ 83 (496)
+.|.|+|+.+.++++++|..+|.+|+++ +.|+.++|.+|| .++|+|..++.++|+.|++++...++ +..+ .+++
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~ 80 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRC 80 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccc
Confidence 3689999999999999999999999876 999999999999 99999999999999999999874432 2222 3367
Q ss_pred CCHHHHHHHhcCCC-CCCCCCCCCc-cCCCCCCcccceecccCcccccCCCCCCC-CChHHHHHHHhcCCcEEEEEeecC
Q 010960 84 LNLEAFFKYLFGDI-NPPLSPTPVV-HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-CSDVPIIRALQKGVRVIELDIWPN 160 (496)
Q Consensus 84 lt~~gF~~~L~s~~-n~~~~~~~~v-~qDM~~PLshYFIsSSHNTYL~g~Ql~g~-SS~e~Y~~aL~~GCRCVElDcWdG 160 (496)
|++|||++||+|++ |.+.. ..| +|||++|||||||||||||||+||||.|. ||+++|++||++||||||||||||
T Consensus 81 l~~~~f~~~L~s~~~n~~~~--~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~ 158 (537)
T PLN02223 81 LELDHLNEFLFSTELNPPIG--DQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPD 158 (537)
T ss_pred cCHHHHHHHhcCcccCCccc--cccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCC
Confidence 99999999999864 55443 456 99999999999999999999999999999 999999999999999999999987
Q ss_pred CCCCCceEeecCcccccchHHHHHHHHhhhhhccC-CCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCC
Q 010960 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVAS-EYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEF 238 (496)
Q Consensus 161 ~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S-~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~-~~~~~l 238 (496)
+. ++|+|+||||||++|+|+|||+||++|||++| +||||||||||||++||.+||++|++||||+|++++. +....|
T Consensus 159 ~~-~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~l 237 (537)
T PLN02223 159 GK-DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEF 237 (537)
T ss_pred CC-CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccC
Confidence 54 67999999999999999999999999999998 9999999999999999999999999999999999765 557899
Q ss_pred CChhhccCcEEEecCCCCchhhHHHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccc
Q 010960 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKS 318 (496)
Q Consensus 239 PSP~~Lk~KILIK~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (496)
|||++||||||||+|++++.+.++. ++ +.. . .++ + .+..
T Consensus 238 PSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~~~--~----------~~~-~----~~~~------ 276 (537)
T PLN02223 238 PSPAELQNKILISRRPPKELLYAKA---------------DD---GGV--G----------VRN-E----LEIQ------ 276 (537)
T ss_pred CChHHhCCCEEEEcCCCcccccccc---------------cc---ccc--c----------ccc-c----cccc------
Confidence 9999999999999998865432210 00 000 0 000 0 0000
Q ss_pred ccccchhhhcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhh--hchhHHHhhccceeeEecCCCc-CCCCC
Q 010960 319 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGT--YGNDIVRFTQRNLLRIYPKGIR-VDSSN 395 (496)
Q Consensus 319 ~~~~~~els~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~--~~~~~~~~n~~~l~RvYP~g~R-vdSSN 395 (496)
.....++++.|+.++..++++.+ .+++|.++.++.+. ++.+|++||++||+||||+|+| +||||
T Consensus 277 ~~~~~~~y~~li~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 277 EGPADKNYQSLVGFHAVEPRGML-------------QKALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred ccccccceeeeeeeeccccccch-------------hhhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 01224678889988887765432 23445445444432 4678999999999999999999 59999
Q ss_pred CCccccccccceeeeecccCCCcccccccccccccCceeeeecCCcccCCCCCCcccCCCCCCCcceEEEEEEEecCCCC
Q 010960 396 YNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWY 475 (496)
Q Consensus 396 ~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~p~~~~L~v~viSGq~~~ 475 (496)
|||+.+|++|||||||||||+|++||||+|||++||||||||||++||+.++. ..|||....+.+++|+|+|||||||.
T Consensus 344 YnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~-~~FdP~~~~~~~~~L~V~Visgq~~~ 422 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPS-GVFYPTENPVVVKILKVKIYMGDGWI 422 (537)
T ss_pred CCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCcc-cccCCCCCcccceEEEEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999987653 48999876556899999999999999
Q ss_pred CCCCCCcccccCCCCceEecC
Q 010960 476 YDFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~ 496 (496)
.+|++++ +.+++||+||+|.
T Consensus 423 ~~~~k~~-~~~s~~DpyV~Ve 442 (537)
T PLN02223 423 VDFKKRI-GRLSKPDLYVRIS 442 (537)
T ss_pred CCccccc-CCCCCCCeEEEEE
Confidence 9998886 8899999999983
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-126 Score=1025.63 Aligned_cols=451 Identities=30% Similarity=0.447 Sum_probs=356.9
Q ss_pred cCCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCC--------CHHHHHHHHHHHhhhhhhhhhccCCCCHHH
Q 010960 19 AASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKA--------SKEDAQAIIDSLRELKHLNIFQRRGLNLEA 88 (496)
Q Consensus 19 ~~~~~r~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~--------~~~~~~~li~~~e~~~~~~~~~~~~lt~~g 88 (496)
..+|+|+||+.||.+++++ .+||.++|.+||++.|+++.+ +..++..||++||+... ...+++|+.||
T Consensus 215 ~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~--~a~~gqms~dg 292 (1189)
T KOG1265|consen 215 NKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSD--NAEKGQMSTDG 292 (1189)
T ss_pred HhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchh--hhhccccchhh
Confidence 4578999999999999977 899999999999999999864 56899999999995322 12468999999
Q ss_pred HHHHhcCCCCCCCCC-CCCccCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCCc
Q 010960 89 FFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNV 166 (496)
Q Consensus 89 F~~~L~s~~n~~~~~-~~~v~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~-~~eP 166 (496)
|.+||++++|.++.+ ....++||+||||||||||||||||||+||.|.||+|+|++||+.||||||||||||.+ .+||
T Consensus 293 f~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~EP 372 (1189)
T KOG1265|consen 293 FVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEEP 372 (1189)
T ss_pred hHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCCc
Confidence 999999999999853 35689999999999999999999999999999999999999999999999999999943 3579
Q ss_pred eEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-----CCCCCCCCh
Q 010960 167 DVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-----ECLKEFPSP 241 (496)
Q Consensus 167 vV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~-----~~~~~lPSP 241 (496)
||+||+|+|+.|.|+|||+||++.||++||||||||+|||||+.||.+||+||++||||+|++.|. ++...||||
T Consensus 373 vITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPsP 452 (1189)
T KOG1265|consen 373 VITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPSP 452 (1189)
T ss_pred eeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999664 345799999
Q ss_pred hhccCcEEEecCCCCchhhHH-Hh-hhhh-----ccccCCCCCCcc---cccC-----CCC----CCccccCCCCCC---
Q 010960 242 ESLKRRIIISTKPPKEYLEAK-EE-KEKE-----NDSQRGKGSADE---EAWG-----KEV----PNLKSLNNSACD--- 299 (496)
Q Consensus 242 ~~Lk~KILIK~K~~~~~~~~~-~~-~~~~-----~~~~~~~~~~~~---~~~~-----~~~----~~~~~~~~~~~~--- 299 (496)
++||+|||||+|+........ .. ..++ +++.......++ +..| .+. ..+.......+.
T Consensus 453 ~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~~ 532 (1189)
T KOG1265|consen 453 EDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAHP 532 (1189)
T ss_pred HHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccch
Confidence 999999999999753211000 00 0000 000000000000 0000 000 000000000000
Q ss_pred CCCCCCCCCCCCC--------ccccccccccchhhhcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhhhch
Q 010960 300 KDDFDGGVDNDEE--------DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGN 371 (496)
Q Consensus 300 ~~~~~~~~~~~~~--------~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~ 371 (496)
+.+.+....+..+ +........+++++|.||+|.....|.+|.-+-+. ..++.|+||+|+++..++++++.
T Consensus 533 E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~kr-N~~f~msSf~E~~~~~~Lk~~~i 611 (1189)
T KOG1265|consen 533 ELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEKR-NRHFEMSSFDESTGLGYLKKSPI 611 (1189)
T ss_pred hhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhhh-cceeeeeechhHHHHHHHHhCch
Confidence 0000000000000 01111223467899999998766666666544332 35778999999999999999999
Q ss_pred hHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccccccccCceeeeecCCcccCCCCCCcc
Q 010960 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEV 451 (496)
Q Consensus 372 ~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~lr~~~~~~~~ 451 (496)
+||+||+++|+||||+|+|||||||+||.|||+|||||||||||+|.+||||.|||..||+|||+|||++||++ |..
T Consensus 612 efV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrp---Dr~ 688 (1189)
T KOG1265|consen 612 EFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRP---DRQ 688 (1189)
T ss_pred HHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCC---CcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 678
Q ss_pred cCCCCCCCc----ceEEEEEEEecCCCC
Q 010960 452 FDPKVKLPA----KKTLKVTVYMGEGWY 475 (496)
Q Consensus 452 fdp~~~~p~----~~~L~v~viSGq~~~ 475 (496)
|||+...|+ ..+|+|+|||||.+-
T Consensus 689 fdPFse~~VdgvIA~t~sV~VISgqFLS 716 (1189)
T KOG1265|consen 689 FDPFSESPVDGVIAATLSVTVISGQFLS 716 (1189)
T ss_pred cCCcccCcccceEEeeEEEEEEeeeecc
Confidence 999987553 678999999999984
No 8
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=1.9e-111 Score=828.42 Aligned_cols=257 Identities=36% Similarity=0.562 Sum_probs=239.7
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhHHHhhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~-~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~ 266 (496)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999774 446799999999999999998742
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcccccc
Q 010960 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (496)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~ 346 (496)
++++|++|+.++.+++++++.....
T Consensus 150 -------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~~~~ 174 (258)
T cd08629 150 -------------------------------------------------------LVPELSDMIIYCKSVHFGGFSSPGT 174 (258)
T ss_pred -------------------------------------------------------ccHHHHHHHHHhcCCCCCCccchhh
Confidence 2467888888887777777776554
Q ss_pred cCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccccccccc
Q 010960 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (496)
Q Consensus 347 ~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~ 426 (496)
..+..++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 175 ~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~ 254 (258)
T cd08629 175 SGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGC 254 (258)
T ss_pred cCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhhhch
Confidence 33456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 010960 427 FRAN 430 (496)
Q Consensus 427 F~~N 430 (496)
|++|
T Consensus 255 F~~N 258 (258)
T cd08629 255 FQDN 258 (258)
T ss_pred hcCC
Confidence 9987
No 9
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=2.7e-110 Score=817.63 Aligned_cols=252 Identities=36% Similarity=0.561 Sum_probs=225.7
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999987 589999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhHHHhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~--~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 265 (496)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|++..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~-------- 151 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSR-------- 151 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCch--------
Confidence 999999999999999999999999999999999999999998653 3457899999999999999997532
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCccccc
Q 010960 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (496)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l 345 (496)
+|++|+.+..+..+.++....
T Consensus 152 -----------------------------------------------------------~Ls~l~~y~~~~~~~~~~~~~ 172 (254)
T cd08633 152 -----------------------------------------------------------ALSDLVKYTKSVRVHDIETEA 172 (254)
T ss_pred -----------------------------------------------------------hhhHHhhhcccCCcCcccccc
Confidence 122333333222222332211
Q ss_pred ccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccc
Q 010960 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (496)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g 425 (496)
...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 173 ---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~lN~g 249 (254)
T cd08633 173 ---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRA 249 (254)
T ss_pred ---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHhhcc
Confidence 13467899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010960 426 MFRAN 430 (496)
Q Consensus 426 ~F~~N 430 (496)
||+.|
T Consensus 250 ~F~~N 254 (254)
T cd08633 250 KFSAN 254 (254)
T ss_pred cccCC
Confidence 99987
No 10
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=3e-110 Score=821.74 Aligned_cols=256 Identities=34% Similarity=0.598 Sum_probs=238.2
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
||||++|||||||||||||||+|+||.|+||+++|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhHHHhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~--~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 265 (496)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999998742
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCccccc
Q 010960 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (496)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l 345 (496)
++++|++|+.++.+++++++....
T Consensus 151 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 174 (258)
T cd08630 151 --------------------------------------------------------ISPELSALAVYCQATRLRTLEPAP 174 (258)
T ss_pred --------------------------------------------------------chHHHHhhHhhcccccCCCcchhh
Confidence 257789999888877777776653
Q ss_pred ccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccc
Q 010960 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (496)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g 425 (496)
. .....+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 175 ~-~~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G 253 (258)
T cd08630 175 V-QPQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAG 253 (258)
T ss_pred h-cCCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhhhcc
Confidence 2 123457899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010960 426 MFRAN 430 (496)
Q Consensus 426 ~F~~N 430 (496)
||+.|
T Consensus 254 ~F~~N 258 (258)
T cd08630 254 RFLVN 258 (258)
T ss_pred cccCC
Confidence 99987
No 11
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=8.5e-110 Score=818.86 Aligned_cols=254 Identities=33% Similarity=0.527 Sum_probs=228.4
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecCcccccchHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~-~~~ePvV~HG~TlTs~I~FrdVi~a 186 (496)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +++|||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhhhhccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhh
Q 010960 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLE 260 (496)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~mA~il~~ilGd~L~~~~~~~-----~~~lPSP~~Lk~KILIK~K~~~~~~~ 260 (496)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+. ...||||++||||||||+|+.+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~---- 156 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYE---- 156 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeecccc----
Confidence 999999999999999999999 799999999999999999999977532 4789999999999999998732
Q ss_pred HHHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCC
Q 010960 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (496)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~ 340 (496)
+|++|+.++.+..+.+
T Consensus 157 ----------------------------------------------------------------els~lv~y~~~~kf~~ 172 (261)
T cd08624 157 ----------------------------------------------------------------EMSSLVNYIQPTKFVS 172 (261)
T ss_pred ----------------------------------------------------------------cchhhhcccCCcCCCC
Confidence 2344555544444444
Q ss_pred cccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccc
Q 010960 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420 (496)
Q Consensus 341 ~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m 420 (496)
|....... ...+++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|
T Consensus 173 f~~~~~~~-~~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~M 251 (261)
T cd08624 173 FEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLPM 251 (261)
T ss_pred cccccccC-CcceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChhh
Confidence 54433221 23468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccc
Q 010960 421 WLMHGMFRAN 430 (496)
Q Consensus 421 ~ln~g~F~~N 430 (496)
|||+|||+.|
T Consensus 252 ~LN~G~F~~n 261 (261)
T cd08624 252 QQNMALFEFN 261 (261)
T ss_pred hhhcccccCC
Confidence 9999999987
No 12
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=7e-110 Score=818.27 Aligned_cols=256 Identities=34% Similarity=0.585 Sum_probs=234.5
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhHHHhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~--~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 265 (496)
++|||++|+|||||||||||+++||++||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999998741
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCccccc
Q 010960 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (496)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l 345 (496)
++++|++|++++.+..+.++....
T Consensus 151 --------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~~~~ 174 (258)
T cd08631 151 --------------------------------------------------------LSPELSDCVIYCKSVSFRSFTHSR 174 (258)
T ss_pred --------------------------------------------------------ccHHHHHhHhhhcccccCCccccc
Confidence 245678888777666555555322
Q ss_pred ccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccc
Q 010960 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (496)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g 425 (496)
. ....++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 175 ~-~~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G 253 (258)
T cd08631 175 E-HYHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDLNDG 253 (258)
T ss_pred c-cCccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHhhcc
Confidence 1 112457899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010960 426 MFRAN 430 (496)
Q Consensus 426 ~F~~N 430 (496)
||+.|
T Consensus 254 ~F~~N 258 (258)
T cd08631 254 LFRQN 258 (258)
T ss_pred hhcCC
Confidence 99987
No 13
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=7.9e-110 Score=817.51 Aligned_cols=255 Identities=35% Similarity=0.547 Sum_probs=231.9
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhHHHhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~--~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 265 (496)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~k---------- 149 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEeccc----------
Confidence 99999999999999999999999999999999999999999977544 479999999999999999862
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCccccc
Q 010960 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (496)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l 345 (496)
++++|++|+++..+..+.++....
T Consensus 150 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 173 (257)
T cd08595 150 --------------------------------------------------------IAKALSDLVIYTKSEKFCSFTHSR 173 (257)
T ss_pred --------------------------------------------------------cChhHHHHhhhcCCcCCCCccccc
Confidence 123567777766555444444322
Q ss_pred ccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccc
Q 010960 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (496)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g 425 (496)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|
T Consensus 174 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~LN~G 252 (257)
T cd08595 174 DN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDLQNG 252 (257)
T ss_pred cc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhhhcC
Confidence 21 12457899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010960 426 MFRAN 430 (496)
Q Consensus 426 ~F~~N 430 (496)
||++|
T Consensus 253 ~F~~N 257 (257)
T cd08595 253 KFLDN 257 (257)
T ss_pred cccCC
Confidence 99987
No 14
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=6.5e-110 Score=813.53 Aligned_cols=251 Identities=33% Similarity=0.559 Sum_probs=223.9
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 589999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhHHHhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~--~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 265 (496)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++. +....||||++||||||||+|++..
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~-------- 151 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCR-------- 151 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcH--------
Confidence 999999999999999999999999999999999999999987652 3467899999999999999998521
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCccccc
Q 010960 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (496)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l 345 (496)
++++|++++.+..+.++.+.
T Consensus 152 -----------------------------------------------------------els~l~~~~~~~~~~~~~~~- 171 (253)
T cd08632 152 -----------------------------------------------------------DLSDLVVYTNSVAAQDIVDD- 171 (253)
T ss_pred -----------------------------------------------------------HHHhhhhhccCcccccchhc-
Confidence 12233333222222221111
Q ss_pred ccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccc
Q 010960 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (496)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g 425 (496)
....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 172 ---~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~LN~g 248 (253)
T cd08632 172 ---GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQLNRA 248 (253)
T ss_pred ---CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhcc
Confidence 12357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010960 426 MFRAN 430 (496)
Q Consensus 426 ~F~~N 430 (496)
||+.|
T Consensus 249 ~F~~n 253 (253)
T cd08632 249 KFMVN 253 (253)
T ss_pred cccCC
Confidence 99987
No 15
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=2.3e-109 Score=813.03 Aligned_cols=249 Identities=35% Similarity=0.562 Sum_probs=227.0
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
.|||++|||||||||||||||+||||.|+||+++|++||++||||||||||||++ +||||+|||||||+|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999986 689999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC---C--CCCCCCChhhccCcEEEecCCCCchhhHH
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS---E--CLKEFPSPESLKRRIIISTKPPKEYLEAK 262 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~---~--~~~~lPSP~~Lk~KILIK~K~~~~~~~~~ 262 (496)
++|||++|+||||||||||||.+||.+||+||+++|||+|+.++. + ....||||++||||||||+|++
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~------- 152 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKA------- 152 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCc-------
Confidence 999999999999999999999999999999999999999998752 1 2468999999999999999863
Q ss_pred HhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcc
Q 010960 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLK 342 (496)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~ 342 (496)
++|++|+.+..+..+.++.
T Consensus 153 -------------------------------------------------------------~els~l~~y~~~~k~~~~~ 171 (254)
T cd08596 153 -------------------------------------------------------------PELSDLVIYCQAVKFPGLS 171 (254)
T ss_pred -------------------------------------------------------------HHHHHHHHHhcCccCCCCC
Confidence 2345555544343334443
Q ss_pred cccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccccc
Q 010960 343 ECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWL 422 (496)
Q Consensus 343 ~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~l 422 (496)
. +...+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++|||
T Consensus 172 ~-----~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~L 246 (254)
T cd08596 172 T-----PKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLPMHL 246 (254)
T ss_pred c-----cccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChHHHh
Confidence 1 23568899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 010960 423 MHGMFRAN 430 (496)
Q Consensus 423 n~g~F~~N 430 (496)
|+|||+.|
T Consensus 247 N~G~F~~N 254 (254)
T cd08596 247 NAAMFEAN 254 (254)
T ss_pred hhchhcCC
Confidence 99999987
No 16
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.2e-108 Score=809.26 Aligned_cols=251 Identities=34% Similarity=0.542 Sum_probs=221.5
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecCcccccchHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~-~~~ePvV~HG~TlTs~I~FrdVi~a 186 (496)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||+ +++||+|+||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhhH
Q 010960 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (496)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~-----~~~lPSP~~Lk~KILIK~K~~~~~~~~ 261 (496)
|++|||++|+||||||||||||++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~---- 156 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSS---- 156 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhh----
Confidence 999999999999999999999999999999999999999999976432 46899999999999999987311
Q ss_pred HHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCc
Q 010960 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (496)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~ 341 (496)
|+++..+..+.++
T Consensus 157 -------------------------------------------------------------------L~~y~~~~~~~~~ 169 (257)
T cd08626 157 -------------------------------------------------------------------LVNYAQPVKFQGF 169 (257)
T ss_pred -------------------------------------------------------------------hhcccccCCCCCc
Confidence 1111111111111
Q ss_pred ccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccc
Q 010960 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (496)
Q Consensus 342 ~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ 421 (496)
...... ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||
T Consensus 170 ~~~~~~-~~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~ 248 (257)
T cd08626 170 DVAEER-NIHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQ 248 (257)
T ss_pred Cchhhc-CCCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChhHH
Confidence 111111 1135789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc
Q 010960 422 LMHGMFRAN 430 (496)
Q Consensus 422 ln~g~F~~N 430 (496)
||+|||+.|
T Consensus 249 LN~G~F~~n 257 (257)
T cd08626 249 LNQGKFEYN 257 (257)
T ss_pred hhhccccCC
Confidence 999999987
No 17
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.5e-108 Score=808.96 Aligned_cols=251 Identities=33% Similarity=0.524 Sum_probs=224.5
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCC-CCCceEeecCcccccchHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~-~~ePvV~HG~TlTs~I~FrdVi~a 186 (496)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhhhhccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhh
Q 010960 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (496)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hc-s~~qQ~~mA~il~~ilGd~L~~~~~~-----~~~~lPSP~~Lk~KILIK~K~~~~~~~ 260 (496)
|++|||++|+||||||||||| +++||++||+||++||||+|++++.+ ....||||++||||||||+|+.
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkL----- 155 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKM----- 155 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccch-----
Confidence 999999999999999999999 59999999999999999999997743 2468999999999999999863
Q ss_pred HHHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCC
Q 010960 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (496)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~ 340 (496)
++|++|+.+..+.+
T Consensus 156 ------------------------------------------------------------------s~Lv~y~~~v~f~~ 169 (258)
T cd08623 156 ------------------------------------------------------------------SNLVNYIQPVKFES 169 (258)
T ss_pred ------------------------------------------------------------------hcccccccCcccCC
Confidence 12333333333333
Q ss_pred cccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccc
Q 010960 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSL 420 (496)
Q Consensus 341 ~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m 420 (496)
|...... ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++|
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M 248 (258)
T cd08623 170 FEASKKR-NKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSM 248 (258)
T ss_pred ccccccc-CCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCCcch
Confidence 3332211 124578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccc
Q 010960 421 WLMHGMFRAN 430 (496)
Q Consensus 421 ~ln~g~F~~N 430 (496)
|||+|||+.|
T Consensus 249 ~LN~G~F~~~ 258 (258)
T cd08623 249 QINMGMYEYN 258 (258)
T ss_pred hhhcccccCC
Confidence 9999999987
No 18
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=2.1e-108 Score=809.93 Aligned_cols=256 Identities=38% Similarity=0.607 Sum_probs=234.8
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
+|||++|||||||||||||||+|+||.|+||+++|++||++||||||||||||++ +||||+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhHHHhhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~-~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~ 266 (496)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 9999999999999999999999999999999999999999997743 35789999999999999998741
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcccccc
Q 010960 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (496)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~ 346 (496)
++++|++|+.+..+..+.++.+...
T Consensus 150 -------------------------------------------------------i~~els~L~~~~~~~k~~~~~~~~~ 174 (257)
T cd08593 150 -------------------------------------------------------LAKELSDLVIYCKSVHFKSFEHSKE 174 (257)
T ss_pred -------------------------------------------------------ccHHHHhhhhhcccccCCChhhhcc
Confidence 2456788876655544556655432
Q ss_pred cCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccccccccc
Q 010960 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (496)
Q Consensus 347 ~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~ 426 (496)
.....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 175 -~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN~G~ 253 (257)
T cd08593 175 -NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLNDGL 253 (257)
T ss_pred -cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhhhch
Confidence 2345688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 010960 427 FRAN 430 (496)
Q Consensus 427 F~~N 430 (496)
|+.|
T Consensus 254 F~~N 257 (257)
T cd08593 254 FRQN 257 (257)
T ss_pred hcCC
Confidence 9987
No 19
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=3.5e-108 Score=805.82 Aligned_cols=251 Identities=37% Similarity=0.553 Sum_probs=222.6
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCC-CCceEeecCcccccchHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNVDVLHGGTMTAPVELIKCLRS 186 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~-~ePvV~HG~TlTs~I~FrdVi~a 186 (496)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||+++ +||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhhH
Q 010960 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (496)
Q Consensus 187 I~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~-----~~~lPSP~~Lk~KILIK~K~~~~~~~~ 261 (496)
|++|||++|+||||||||||||++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls----- 155 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLS----- 155 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccch-----
Confidence 999999999999999999999999999999999999999999987442 3689999999999999998731
Q ss_pred HHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCc
Q 010960 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (496)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~ 341 (496)
+|+++..+..+.++
T Consensus 156 ------------------------------------------------------------------~L~~y~~~~~f~~~ 169 (257)
T cd08591 156 ------------------------------------------------------------------SLVNYIQPVKFQGF 169 (257)
T ss_pred ------------------------------------------------------------------hhhccccCCCCCCc
Confidence 11111111111112
Q ss_pred ccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccc
Q 010960 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (496)
Q Consensus 342 ~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ 421 (496)
...... ...++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||
T Consensus 170 ~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~ 248 (257)
T cd08591 170 EVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQ 248 (257)
T ss_pred cchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCChhHH
Confidence 111111 1235789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc
Q 010960 422 LMHGMFRAN 430 (496)
Q Consensus 422 ln~g~F~~N 430 (496)
||+|||+.|
T Consensus 249 lN~g~F~~N 257 (257)
T cd08591 249 LNQGKFEYN 257 (257)
T ss_pred hhcccccCC
Confidence 999999987
No 20
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=4.2e-108 Score=809.00 Aligned_cols=250 Identities=34% Similarity=0.517 Sum_probs=223.9
Q ss_pred CCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecCcccccchHHHHHHHH
Q 010960 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 109 qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~-~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||+ .++||+||||||||++|+|+|||+||
T Consensus 2 ~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~I 81 (258)
T cd08625 2 DDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEAI 81 (258)
T ss_pred CccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999995 24689999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhhH
Q 010960 188 KEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEA 261 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hc-s~~qQ~~mA~il~~ilGd~L~~~~~~-----~~~~lPSP~~Lk~KILIK~K~~~~~~~~ 261 (496)
++|||++|+||||||||||| |.+||++||++|++||||+|++++.+ +...||||++||||||||+|+..
T Consensus 82 ~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklS----- 156 (258)
T cd08625 82 AESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMS----- 156 (258)
T ss_pred HHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeecc-----
Confidence 99999999999999999999 69999999999999999999997754 24689999999999999998642
Q ss_pred HHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCc
Q 010960 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (496)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~ 341 (496)
+|++|+.+.++.++
T Consensus 157 ------------------------------------------------------------------dLvvy~~~vkf~~f 170 (258)
T cd08625 157 ------------------------------------------------------------------TLVNYIEPVKFKSF 170 (258)
T ss_pred ------------------------------------------------------------------cccceecccccCCc
Confidence 22233333333333
Q ss_pred ccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccc
Q 010960 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLW 421 (496)
Q Consensus 342 ~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ 421 (496)
.+.... ...++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||
T Consensus 171 ~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~M~ 249 (258)
T cd08625 171 EAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQ 249 (258)
T ss_pred hhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcchh
Confidence 332211 1245789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc
Q 010960 422 LMHGMFRAN 430 (496)
Q Consensus 422 ln~g~F~~N 430 (496)
||+|||+.|
T Consensus 250 LN~G~F~~n 258 (258)
T cd08625 250 LNMGVFEYN 258 (258)
T ss_pred hhcccccCC
Confidence 999999987
No 21
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.5e-107 Score=801.03 Aligned_cols=253 Identities=36% Similarity=0.602 Sum_probs=229.6
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
.|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ +||+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhHHHhhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~-~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~ 266 (496)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~----------- 148 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKL----------- 148 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCc-----------
Confidence 999999999999999999999999999999999999999998664 34679999999999999999863
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcccccc
Q 010960 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (496)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~ 346 (496)
+++||++|+.|+.+..+. +. .+.
T Consensus 149 -------------------------------------------------------~~~eLs~l~~y~~~~~~~-~~-~~~ 171 (254)
T cd08628 149 -------------------------------------------------------IAIELSDLVVYCKPTSKT-KD-NLE 171 (254)
T ss_pred -------------------------------------------------------CCHHHHhhHhhhcccccc-cC-Ccc
Confidence 145678888776554321 11 111
Q ss_pred cCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccccccccc
Q 010960 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (496)
Q Consensus 347 ~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~ 426 (496)
.+...+++||+|+++.+++++.+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 172 -~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~ 250 (254)
T cd08628 172 -NPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHAL 250 (254)
T ss_pred -cccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhhhhh
Confidence 1234478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 010960 427 FRAN 430 (496)
Q Consensus 427 F~~N 430 (496)
|+.|
T Consensus 251 F~~n 254 (254)
T cd08628 251 FSLN 254 (254)
T ss_pred ccCC
Confidence 9987
No 22
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=4.9e-107 Score=784.11 Aligned_cols=225 Identities=41% Similarity=0.659 Sum_probs=215.5
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||||||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccCcEEEecCCCCchhhHHHhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~--~~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~ 265 (496)
++|||++|+||||||||||||++||.+||+||+++|||+|+.++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33467999999999999999741
Q ss_pred hhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCccccc
Q 010960 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (496)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l 345 (496)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccc
Q 010960 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (496)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g 425 (496)
.+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 ------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~g 222 (227)
T cd08594 149 ------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQLNRA 222 (227)
T ss_pred ------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHhhcc
Confidence 24689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010960 426 MFRAN 430 (496)
Q Consensus 426 ~F~~N 430 (496)
||+.|
T Consensus 223 ~F~~N 227 (227)
T cd08594 223 KFRAN 227 (227)
T ss_pred cccCC
Confidence 99987
No 23
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=1.2e-105 Score=791.64 Aligned_cols=259 Identities=35% Similarity=0.566 Sum_probs=236.4
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ +||||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhHHHhhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~-~~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~ 266 (496)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++.
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------- 150 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------- 150 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------
Confidence 999999999999999999999999999999999999999999774 4567999999999999999997521
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcccccc
Q 010960 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (496)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~ 346 (496)
.+++++|++|+.++.+..+.++.....
T Consensus 151 -----------------------------------------------------~~~~~els~l~~~~~~~~~~~~~~~~~ 177 (260)
T cd08597 151 -----------------------------------------------------RKLCKELSDLVSLCKSVRFQDFPTSAQ 177 (260)
T ss_pred -----------------------------------------------------ccccHHHHhhhhhhcCcccCCcccccc
Confidence 123578889988876655555543221
Q ss_pred cCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccccccccc
Q 010960 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (496)
Q Consensus 347 ~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~ 426 (496)
.....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+||
T Consensus 178 -~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN~g~ 256 (260)
T cd08597 178 -NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLNTGK 256 (260)
T ss_pred -ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhhccc
Confidence 2234578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 010960 427 FRAN 430 (496)
Q Consensus 427 F~~N 430 (496)
|++|
T Consensus 257 F~~N 260 (260)
T cd08597 257 FLEN 260 (260)
T ss_pred ccCC
Confidence 9987
No 24
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=3.1e-104 Score=766.64 Aligned_cols=225 Identities=42% Similarity=0.697 Sum_probs=216.4
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+||||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhHHHhhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~-~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~ 266 (496)
++|||++|+||||||||||||.+||++||++|+++|||+|++++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999988655 48999999999999999741
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcccccc
Q 010960 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (496)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~ 346 (496)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccccccccc
Q 010960 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (496)
Q Consensus 347 ~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~ 426 (496)
.+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 148 -----~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~g~ 222 (226)
T cd08558 148 -----YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLNQGK 222 (226)
T ss_pred -----ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhhccc
Confidence 246899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 010960 427 FRAN 430 (496)
Q Consensus 427 F~~N 430 (496)
|+.|
T Consensus 223 F~~n 226 (226)
T cd08558 223 FEQN 226 (226)
T ss_pred ccCC
Confidence 9976
No 25
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=1.2e-103 Score=764.75 Aligned_cols=229 Identities=38% Similarity=0.654 Sum_probs=215.9
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
.|||++|||||||||||||||+|+||.|.||+|+|++||++||||||||||||++ +||+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999985 689999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhHHHhhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~-~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~ 266 (496)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998754 3578999999999999998750 0
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcccccc
Q 010960 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (496)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~ 346 (496)
+
T Consensus 150 ---------------------------------------------------------------------~---------- 150 (231)
T cd08598 150 ---------------------------------------------------------------------K---------- 150 (231)
T ss_pred ---------------------------------------------------------------------C----------
Confidence 0
Q ss_pred cCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccccccccc
Q 010960 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (496)
Q Consensus 347 ~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~ 426 (496)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 151 ---~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~ 227 (231)
T cd08598 151 ---TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLNEAM 227 (231)
T ss_pred ---CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhhccc
Confidence 01246899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 010960 427 FRA 429 (496)
Q Consensus 427 F~~ 429 (496)
|+.
T Consensus 228 F~~ 230 (231)
T cd08598 228 FAG 230 (231)
T ss_pred ccC
Confidence 985
No 26
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.1e-103 Score=760.74 Aligned_cols=225 Identities=38% Similarity=0.658 Sum_probs=210.9
Q ss_pred CCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHh
Q 010960 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (496)
Q Consensus 109 qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~ 188 (496)
|||++|||||||||||||||+|+||.|+||+++|++||++||||||||||||++ +||||+||+|+|++|+|+|||+||+
T Consensus 2 ~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I~ 80 (229)
T cd08627 2 EEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTIK 80 (229)
T ss_pred ccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999987 5899999999999999999999999
Q ss_pred hhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhHHHhhhh
Q 010960 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267 (496)
Q Consensus 189 ~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~-~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~~ 267 (496)
+|||++|+||||||||||||++||.+||++|+++|||+|+.++.+ ....||||++||||||||+|+..
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~----------- 149 (229)
T cd08627 81 EHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY----------- 149 (229)
T ss_pred HhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc-----------
Confidence 999999999999999999999999999999999999999997754 46789999999999999998631
Q ss_pred hccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCccccccc
Q 010960 268 ENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKV 347 (496)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~~ 347 (496)
.
T Consensus 150 --------------------------------------------------------~----------------------- 150 (229)
T cd08627 150 --------------------------------------------------------R----------------------- 150 (229)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred CCCceeEeeccHHHHHHHHhh-hchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCccccccccc
Q 010960 348 DPDKVRRLSLSEQQLENAVGT-YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGM 426 (496)
Q Consensus 348 ~~~~~~~~S~sE~~~~kl~~~-~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g~ 426 (496)
.++||+|+++.+++++ .+.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+||
T Consensus 151 -----~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~LN~G~ 225 (229)
T cd08627 151 -----DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQAL 225 (229)
T ss_pred -----ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhhhcCc
Confidence 0257888999998854 5689999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 010960 427 FRA 429 (496)
Q Consensus 427 F~~ 429 (496)
|+.
T Consensus 226 F~~ 228 (229)
T cd08627 226 FML 228 (229)
T ss_pred ccC
Confidence 973
No 27
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-103 Score=841.65 Aligned_cols=218 Identities=33% Similarity=0.566 Sum_probs=194.8
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhcCCCCCCCCCC-CCccCC-CCCC
Q 010960 38 GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHD-MTAP 114 (496)
Q Consensus 38 ~~lt~~~l~~FL~~eQ~e~~~~~-~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~s~~n~~~~~~-~~v~qD-M~~P 114 (496)
.+++..+|++||..+|++..+.. ..+++++..|.+. ...-.+...|+++.|..||+|.+|+.+++. ..|..| |+.|
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D-~~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d~Mn~P 314 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD-TMRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMDDMNNP 314 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh-hhhhccCcceeHHHHHHHHhhcccccccccccccchhhhcCc
Confidence 46899999999999999976543 4566677777532 111124468999999999999999999865 457666 9999
Q ss_pred cccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHhhhhhcc
Q 010960 115 VSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA 194 (496)
Q Consensus 115 LshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~ 194 (496)
||||||+||||||||||||.++||.|+|+|||++||||||||||||++ +.||||||||+||||.|+||+++|++|||++
T Consensus 315 LShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd-~~pvIyHG~T~TtKIkf~DVlhtIkdhAFvt 393 (1267)
T KOG1264|consen 315 LSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPD-GKPVIYHGHTRTTKIKFDDVLHTIKDHAFVT 393 (1267)
T ss_pred chhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCC-CCceEEeccceeeeeehHHHHHHHHhhceec
Confidence 999999999999999999999999999999999999999999999998 5799999999999999999999999999999
Q ss_pred CCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCc
Q 010960 195 SEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKE 257 (496)
Q Consensus 195 S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~-~~~~lPSP~~Lk~KILIK~K~~~~ 257 (496)
|.||||||||.|||++||+.||+.+++||||+|++.|.+ ....||||.+||.|||||.||.+.
T Consensus 394 SeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~ 457 (1267)
T KOG1264|consen 394 SEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPP 457 (1267)
T ss_pred cCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCc
Confidence 999999999999999999999999999999999997755 478999999999999999998653
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=1.6e-102 Score=755.34 Aligned_cols=227 Identities=39% Similarity=0.675 Sum_probs=214.9
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhHHHhhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~-~~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~ 266 (496)
++|||++|+||||||||||||.+||++||+||+++|||+|+.++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999997644 4678999999999999998741
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcccccc
Q 010960 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (496)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~ 346 (496)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeeccHHHHHHHH-hhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccc
Q 010960 347 VDPDKVRRLSLSEQQLENAV-GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (496)
Q Consensus 347 ~~~~~~~~~S~sE~~~~kl~-~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g 425 (496)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 ----~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g 224 (229)
T cd08592 149 ----FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQA 224 (229)
T ss_pred ----cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHhhcc
Confidence 0134689999999999 48899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010960 426 MFRAN 430 (496)
Q Consensus 426 ~F~~N 430 (496)
||+.|
T Consensus 225 ~F~~N 229 (229)
T cd08592 225 LFMLN 229 (229)
T ss_pred cccCC
Confidence 99987
No 29
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=1.5e-101 Score=749.55 Aligned_cols=226 Identities=62% Similarity=1.059 Sum_probs=215.4
Q ss_pred cCCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI 187 (496)
||||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++ +||+|+||+|+|++|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 689999999999999999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhHHHhhh
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~-~~~lPSP~~Lk~KILIK~K~~~~~~~~~~~~~ 266 (496)
++|||++|+|||||||||||+.+||++||++|+++|||+||.|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987554 379999999999999997631
Q ss_pred hhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCCcccccc
Q 010960 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (496)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~~~~~l~ 346 (496)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeEeeccHHHHHHHHh-hhchhHHHhhccceeeEecCCCcCCCCCCCccccccccceeeeecccCCCcccccccc
Q 010960 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHG 425 (496)
Q Consensus 347 ~~~~~~~~~S~sE~~~~kl~~-~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~QmVALN~QT~d~~m~ln~g 425 (496)
.+++||+|+++.++++ +++.+|++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|
T Consensus 149 -----~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G 223 (228)
T cd08599 149 -----VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWLNRG 223 (228)
T ss_pred -----ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhhhcc
Confidence 2357999999999996 8899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 010960 426 MFRAN 430 (496)
Q Consensus 426 ~F~~N 430 (496)
||+.|
T Consensus 224 ~F~~N 228 (228)
T cd08599 224 KFRAN 228 (228)
T ss_pred cccCC
Confidence 99987
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=1.1e-64 Score=508.79 Aligned_cols=251 Identities=22% Similarity=0.369 Sum_probs=212.6
Q ss_pred cCCCCCCcccceecccCcccccCCCCC-----CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHH
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~-----g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~Frd 182 (496)
++||++||+||||++||||||.|+|+. |+++.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 689999999999999999999999998 9999999999999999999999999875 579999999999 999999
Q ss_pred HHHHHhhhhhccCCCceEEeeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecCCCCchhh
Q 010960 183 CLRSIKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLE 260 (496)
Q Consensus 183 Vi~aI~~~AF~~S~yPvILSlE~Hcs~--~qQ~~mA~il~~ilGd~L~~~~~~~~~~lPSP~~Lk~KILIK~K~~~~~~~ 260 (496)
||++|+++||+.++||||||||+||+. +||.+||++|+++||++|+.|+......+|||++|||||||++|.......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998766667899999999999999987521100
Q ss_pred HHHhhhhhccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeeccccCCC
Q 010960 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (496)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~li~~~~~~~~~~ 340 (496)
. + .+...| . .+
T Consensus 159 ~------------~---~~~~~~------------------------------------------~------------~~ 169 (274)
T cd00137 159 T------------G---SSNDTG------------------------------------------F------------VS 169 (274)
T ss_pred c------------c---cccccC------------------------------------------c------------CC
Confidence 0 0 000000 0 00
Q ss_pred cccccccCCCceeEeeccHHHHHH----HHhhhchhHHHhhccceeeEecCCCc---------CCCCCCCccccccc---
Q 010960 341 LKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDIVRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH--- 404 (496)
Q Consensus 341 ~~~~l~~~~~~~~~~S~sE~~~~k----l~~~~~~~~~~~n~~~l~RvYP~g~R---------vdSSN~~P~~~W~~--- 404 (496)
+..... ......+.|++|.++.+ +..+...+++.+|+++|+|+||+|+| ++||||+|+.+|++
T Consensus 170 ~~~~~~-~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~ 248 (274)
T cd00137 170 FEFSTQ-KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPA 248 (274)
T ss_pred cccccc-cCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccC
Confidence 000000 01123568888888854 44456678999999999999999999 99999999999999
Q ss_pred cceeeeecccCCCccccccccccccc
Q 010960 405 GAQMVAFNMQGHGRSLWLMHGMFRAN 430 (496)
Q Consensus 405 G~QmVALN~QT~d~~m~ln~g~F~~N 430 (496)
|||||||||||.|++|+||+|+|+.|
T Consensus 249 g~qiValdfqt~~~~~~ln~~~f~~N 274 (274)
T cd00137 249 GCGIVILDFQTMDLPMQQYMAVIEFN 274 (274)
T ss_pred CceEEEeeCcCCCccHHHHhhhhccC
Confidence 99999999999999999999999977
No 31
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=3.8e-47 Score=335.83 Aligned_cols=118 Identities=37% Similarity=0.644 Sum_probs=91.0
Q ss_pred hhhcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccc
Q 010960 325 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 404 (496)
Q Consensus 325 els~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~ 404 (496)
|||+||+|+.+..+.++...-.. ....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 68999998888776666543222 22568899999999999999999999999999999999999999999999999999
Q ss_pred cceeeeecccCCCcccccccccccccCceeeeecCCccc
Q 010960 405 GAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLL 443 (496)
Q Consensus 405 G~QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~lr 443 (496)
|||||||||||+|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 999999999999999999999999999999999999998
No 32
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=3.7e-46 Score=327.54 Aligned_cols=115 Identities=44% Similarity=0.706 Sum_probs=106.2
Q ss_pred hcceeeeccccCCCcccccccCCCceeEeeccHHHHHHHHhhhchhHHHhhccceeeEecCCCcCCCCCCCccccccccc
Q 010960 327 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406 (496)
Q Consensus 327 s~li~~~~~~~~~~~~~~l~~~~~~~~~~S~sE~~~~kl~~~~~~~~~~~n~~~l~RvYP~g~RvdSSN~~P~~~W~~G~ 406 (496)
|+||+|+.++++.++.+..... ...+++|++|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~-~~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKD-PFYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcC-CCceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 5789999888888777665432 256889999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecccCCCcccccccccccccCceeeeecCCcc
Q 010960 407 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFL 442 (496)
Q Consensus 407 QmVALN~QT~d~~m~ln~g~F~~NG~cGYVLKP~~l 442 (496)
|||||||||+|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 999999999999999999999999999999999986
No 33
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=5.5e-41 Score=304.17 Aligned_cols=134 Identities=46% Similarity=0.816 Sum_probs=128.2
Q ss_pred CCCCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHh
Q 010960 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (496)
Q Consensus 109 qDM~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~ 188 (496)
|||++|||||||++|||||++|+|+.|+++..+|+++|.+||||+|||||++++ ++|+|+||+|+++.++|+|||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 5799999999999999999999999
Q ss_pred hhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhh
Q 010960 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPES 243 (496)
Q Consensus 189 ~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~-~~~~lPSP~~ 243 (496)
++||..+.+||||+||+||+.++|.+||++|+++||++|+.++.. ....+|||++
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
No 34
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=7.1e-38 Score=286.36 Aligned_cols=143 Identities=29% Similarity=0.567 Sum_probs=129.0
Q ss_pred CCCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHhhh
Q 010960 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY 190 (496)
Q Consensus 111 M~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~ 190 (496)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||++++ ++|.|+||+++++.++|+|||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999865 469999999999999999999999999
Q ss_pred hhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecCC
Q 010960 191 AFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTKP 254 (496)
Q Consensus 191 AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~---~~~~lPSP~~Lk~KILIK~K~ 254 (496)
+|+.+.+||||++++||+.++|..+|++|+++||+.|+.++.. ....+|+|++|||||||.+|+
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999997754 468999999999999999875
No 35
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.86 E-value=1e-21 Score=200.24 Aligned_cols=146 Identities=25% Similarity=0.421 Sum_probs=127.7
Q ss_pred CCCCCCcccceecccCcccccC------------CCC--CCCCChHHHHHHHhcCCcEEEEEeecCCC------------
Q 010960 109 HDMTAPVSHYFIYTGHNSYLTG------------NQL--NSDCSDVPIIRALQKGVRVIELDIWPNSK------------ 162 (496)
Q Consensus 109 qDM~~PLshYFIsSSHNTYL~g------------~Ql--~g~SS~e~Y~~aL~~GCRCVElDcWdG~~------------ 162 (496)
.+.+.||+||+|-.|||+|..| +|+ ....+-.....+|..|+|.+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 4578999999999999999998 776 34455567789999999999999996543
Q ss_pred -------CCCceEeecCcc---cccchHHHHHHHHhhhhhc-cCCCceEEeeccCCCH------------HHHHHHHHHH
Q 010960 163 -------KDNVDVLHGGTM---TAPVELIKCLRSIKEYAFV-ASEYPVVITLEDHLTP------------DLQAKVAEMV 219 (496)
Q Consensus 163 -------~~ePvV~HG~Tl---Ts~I~FrdVi~aI~~~AF~-~S~yPvILSlE~Hcs~------------~qQ~~mA~il 219 (496)
+..-.|+|+.++ |+..+|.+||+.||+++|. .+++||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 345789999998 8999999999999999998 7999999999999987 7899999999
Q ss_pred HHHhhc-cccCCCC-----CC------CCCCCChhhccCcEEEecCC
Q 010960 220 TQTLGE-ILFTPGS-----EC------LKEFPSPESLKRRIIISTKP 254 (496)
Q Consensus 220 ~~ilGd-~L~~~~~-----~~------~~~lPSP~~Lk~KILIK~K~ 254 (496)
+++||+ +|++|+. .. ...+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999874 22 26899999999999999775
No 36
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.78 E-value=1.2e-18 Score=174.77 Aligned_cols=143 Identities=22% Similarity=0.374 Sum_probs=120.8
Q ss_pred cCCCCCCcccceecccCcccccCCCCC----------CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc-
Q 010960 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN----------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA- 176 (496)
Q Consensus 108 ~qDM~~PLshYFIsSSHNTYL~g~Ql~----------g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs- 176 (496)
..||+.||++|+|-.|||+|..+..-. +....-.+...|..|||.+|||||..+ +++.|+||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 469999999999999999999865532 233334578899999999999999764 4689999987654
Q ss_pred ------cchHHHHHHHHhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC----CCCCCCChhhcc-
Q 010960 177 ------PVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE----CLKEFPSPESLK- 245 (496)
Q Consensus 177 ------~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~----~~~~lPSP~~Lk- 245 (496)
...|++|++.|+++++.....+|||.||+|++..++..+.+.|+++||++|+.|+.. .....|++++|+
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999998888899999999999999988642 146789999996
Q ss_pred -CcEEEec
Q 010960 246 -RRIIIST 252 (496)
Q Consensus 246 -~KILIK~ 252 (496)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 7777764
No 37
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.66 E-value=2e-16 Score=157.19 Aligned_cols=144 Identities=22% Similarity=0.276 Sum_probs=124.3
Q ss_pred CCCCCcccceecccCcccccCCCC-------CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHH
Q 010960 110 DMTAPVSHYFIYTGHNSYLTGNQL-------NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (496)
Q Consensus 110 DM~~PLshYFIsSSHNTYL~g~Ql-------~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~Frd 182 (496)
+.+.||+++.|-.|||+|..+... .+......+...|..|+|++|||||...+.+++.|+||.......+|.+
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 578999999999999999887664 2233344567899999999999999865446799999988777899999
Q ss_pred HHHHHhhhhhccCCCceEEeeccCCCHHH---HHHHHHHHHHHhhccccCCCCCCCCCCCChhhcc-CcEEEecCC
Q 010960 183 CLRSIKEYAFVASEYPVVITLEDHLTPDL---QAKVAEMVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKP 254 (496)
Q Consensus 183 Vi~aI~~~AF~~S~yPvILSlE~Hcs~~q---Q~~mA~il~~ilGd~L~~~~~~~~~~lPSP~~Lk-~KILIK~K~ 254 (496)
|++.|+++.......+|||.||.+++... +..+++.|+++||+.++.++ ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999999999999999998775 89999999999999999875 3346789999999 999998754
No 38
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.48 E-value=2.9e-14 Score=118.28 Aligned_cols=81 Identities=31% Similarity=0.507 Sum_probs=67.7
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhcCCCCCCCCCC
Q 010960 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT 104 (496)
Q Consensus 26 ei~~lf~~y~~~-~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~s~~n~~~~~~ 104 (496)
||..||.+|+++ .+||+++|++||+++|++..++.+.|.+||++|+... ....+..||++||++||+|++|.+++|.
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~--~~~~~~~lt~~gF~~fL~S~~N~~~~~~ 78 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDE--RNRQKGQLTLEGFTRFLFSDENSIFDPE 78 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHH--HHHCTTEEEHHHHHHHHHSTTCBSS-HH
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccch--hhcccCCcCHHHHHHHHCCCcCCCCChH
Confidence 799999999986 9999999999999999998899999999999998432 1234578999999999999999999753
Q ss_pred -CCcc
Q 010960 105 -PVVH 108 (496)
Q Consensus 105 -~~v~ 108 (496)
..||
T Consensus 79 ~~~Vy 83 (83)
T PF09279_consen 79 HLQVY 83 (83)
T ss_dssp HHSS-
T ss_pred hCCcC
Confidence 3443
No 39
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.25 E-value=3.6e-11 Score=113.58 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=83.5
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc------ccchHHHHHHHHhhhhhccC
Q 010960 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------APVELIKCLRSIKEYAFVAS 195 (496)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT------s~I~FrdVi~aI~~~AF~~S 195 (496)
.+|+-|....+ +.+..+|..||..|||.||+|||...| ++|||.|+.++. ...+|.+|++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888766554 788999999999999999999998766 589999999986 56889999999999999 88
Q ss_pred CCceEEeeccCCCH----HHHHHHHHHHHHHhh
Q 010960 196 EYPVVITLEDHLTP----DLQAKVAEMVTQTLG 224 (496)
Q Consensus 196 ~yPvILSlE~Hcs~----~qQ~~mA~il~~ilG 224 (496)
.+|++|.||.+++. .++.++++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999874 566777777776553
No 40
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.88 E-value=5.4e-09 Score=106.00 Aligned_cols=138 Identities=15% Similarity=0.236 Sum_probs=107.6
Q ss_pred CCCCcccceecccCcccccCCC--CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHh
Q 010960 111 MTAPVSHYFIYTGHNSYLTGNQ--LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (496)
Q Consensus 111 M~~PLshYFIsSSHNTYL~g~Q--l~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~ 188 (496)
=+.||++.-|-.|||++-...- -.+.+....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|+
T Consensus 6 d~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~ 83 (279)
T cd08586 6 DDTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECY 83 (279)
T ss_pred CCCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHH
Confidence 3789999999999998653322 34556666788889999999999999764 25689999976554 89999999999
Q ss_pred hhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecC
Q 010960 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTK 253 (496)
Q Consensus 189 ~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~---~~~~lPSP~~Lk~KILIK~K 253 (496)
++--..-.-.|||+|..+.+... -.+-+.++|.+.+..+... ....+|+..++||||++-.+
T Consensus 84 ~FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 84 SFLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 98877777889999999998763 3334556666666555422 24789999999999999865
No 41
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=98.84 E-value=1.2e-08 Score=102.97 Aligned_cols=138 Identities=18% Similarity=0.279 Sum_probs=103.4
Q ss_pred CCCCcccceecccCcccccCCCC--CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc-cchHHHHHHHH
Q 010960 111 MTAPVSHYFIYTGHNSYLTGNQL--NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA-PVELIKCLRSI 187 (496)
Q Consensus 111 M~~PLshYFIsSSHNTYL~g~Ql--~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs-~I~FrdVi~aI 187 (496)
-++||++|.+-.+||+|..+..- .+..........|..|.|-++||++... ++..++||.-... ..+|.++++.|
T Consensus 8 ~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~i 85 (270)
T cd08588 8 CDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLREV 85 (270)
T ss_pred CCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHHH
Confidence 57899999999999999887642 3333334567789999999999999753 4689999965443 78999999999
Q ss_pred hhhhhccCCCceEEeeccCCCHHHHHHHHHHH-HHHhhccccCCCCCC--CCCCCChhhcc--CcEEEe
Q 010960 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMV-TQTLGEILFTPGSEC--LKEFPSPESLK--RRIIIS 251 (496)
Q Consensus 188 ~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il-~~ilGd~L~~~~~~~--~~~lPSP~~Lk--~KILIK 251 (496)
+++.=..-.=-|||.||++.+.... ..+.++ ...||+.+|.|+... ...+|++++|. ||-||-
T Consensus 86 ~~fL~~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlvv 153 (270)
T cd08588 86 VDFLDANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLLV 153 (270)
T ss_pred HHHHHhCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEEE
Confidence 9986443333389999999987654 233333 368999999886543 46899999997 554444
No 42
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=97.70 E-value=0.00033 Score=71.28 Aligned_cols=136 Identities=15% Similarity=0.234 Sum_probs=94.5
Q ss_pred CCCcccceecccCcccc--cCCCCC-------------------CCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEe
Q 010960 112 TAPVSHYFIYTGHNSYL--TGNQLN-------------------SDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVL 169 (496)
Q Consensus 112 ~~PLshYFIsSSHNTYL--~g~Ql~-------------------g~SS~e~Y~~aL~~GCRCVElDcWdG~-~~~ePvV~ 169 (496)
+.||.+..|-.|||+.- ...... +..-......=|..|+|.++|++.-.+ .+++-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 57999999999999543 322211 111111245567899999999995432 12457888
Q ss_pred ecCcccccchHHHHHHHHhhhhhccCCCceEEeeccC-----CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc
Q 010960 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH-----LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL 244 (496)
Q Consensus 170 HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~H-----cs~~qQ~~mA~il~~ilGd~L~~~~~~~~~~lPSP~~L 244 (496)
||-- +-.+|.+|++.|+++.=....=-|||.++.. ++.++-..+.+.|.++||+.++.+ .....-|+.++|
T Consensus 86 H~~~--~~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLY--SGEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eecc--cccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 8842 2288999999999976555455688888643 335778888899999999999975 223456899999
Q ss_pred c--CcEEEe
Q 010960 245 K--RRIIIS 251 (496)
Q Consensus 245 k--~KILIK 251 (496)
. ||-+|-
T Consensus 162 ~~~gk~viv 170 (288)
T cd08587 162 WESGKRVIV 170 (288)
T ss_pred HhCCCeEEE
Confidence 7 774444
No 43
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=97.62 E-value=0.00045 Score=70.19 Aligned_cols=136 Identities=20% Similarity=0.303 Sum_probs=95.4
Q ss_pred CCCcccceecccCcccccCCCCC---------CCCChHHHHHHHhcCCcEEEEEeecCC-CCCCceEeecCcccccchHH
Q 010960 112 TAPVSHYFIYTGHNSYLTGNQLN---------SDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELI 181 (496)
Q Consensus 112 ~~PLshYFIsSSHNTYL~g~Ql~---------g~SS~e~Y~~aL~~GCRCVElDcWdG~-~~~ePvV~HG~TlTs~I~Fr 181 (496)
+.||++=+|--|||+.-.+-... +..-......-|..|.|-+.|.|.-.+ .+++-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 46899999999999664332210 111122345678899999999996432 2245788888542 38999
Q ss_pred HHHHHHhhhhhccCCCceEEeeccCCC------HHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc--cCcEEEec
Q 010960 182 KCLRSIKEYAFVASEYPVVITLEDHLT------PDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL--KRRIIIST 252 (496)
Q Consensus 182 dVi~aI~~~AF~~S~yPvILSlE~Hcs------~~qQ~~mA~il~~ilGd~L~~~~~~~~~~lPSP~~L--k~KILIK~ 252 (496)
+|++.|+++.=.. .=-|||.+ +|.. ++.-..+.++|.++||+.|+.+.. .....|+.++| +||.+|-.
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv~ 159 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVIIC 159 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEEE
Confidence 9999999986555 66688877 4443 577788999999999999997753 23456899997 56655553
No 44
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=97.27 E-value=0.0023 Score=65.44 Aligned_cols=136 Identities=19% Similarity=0.291 Sum_probs=90.8
Q ss_pred CCCcccceecccCc--ccccCC-CCCCC------------------------CChHHHHHHHhcCCcEEEEEeecCCCCC
Q 010960 112 TAPVSHYFIYTGHN--SYLTGN-QLNSD------------------------CSDVPIIRALQKGVRVIELDIWPNSKKD 164 (496)
Q Consensus 112 ~~PLshYFIsSSHN--TYL~g~-Ql~g~------------------------SS~e~Y~~aL~~GCRCVElDcWdG~~~~ 164 (496)
+.||.+..|--||| ||-+.. .-.|+ .-......-|..|+|.+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 46999999999999 554332 11111 1111235567889999999996433235
Q ss_pred CceEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccCC---CHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCh
Q 010960 165 NVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL---TPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241 (496)
Q Consensus 165 ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hc---s~~qQ~~mA~il~~ilGd~L~~~~~~~~~~lPSP 241 (496)
+-.++||-. + .++.+|++.|+++.=....=-|||.+. |+ +.++-..+.+.|.++||+.|+.+.. ...-|+.
T Consensus 87 ~~~~~Hg~~--~-~~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL 160 (290)
T cd08616 87 DLYFVHGLY--G-ILVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTL 160 (290)
T ss_pred cEEEEEecc--c-hhHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcH
Confidence 678999842 2 299999999999754444455888886 33 3455567888999999999885432 2345799
Q ss_pred hhcc---CcEEEecC
Q 010960 242 ESLK---RRIIISTK 253 (496)
Q Consensus 242 ~~Lk---~KILIK~K 253 (496)
++|. .+|+|-..
T Consensus 161 ~~l~~~~krVIi~y~ 175 (290)
T cd08616 161 EYLWEKGYQVIVFYH 175 (290)
T ss_pred HHHHhCCCEEEEEEC
Confidence 9996 34555443
No 45
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=96.70 E-value=0.0049 Score=61.04 Aligned_cols=97 Identities=20% Similarity=0.247 Sum_probs=65.1
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc------cchHHHHHHHHhhhh--h-
Q 010960 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------PVELIKCLRSIKEYA--F- 192 (496)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs------~I~FrdVi~aI~~~A--F- 192 (496)
-|||-|.--.= ...||..||-.||+|||=- + ++.+|.|-..+.+ ++.+..+.+.++... |
T Consensus 4 hsHNDY~r~~P---------l~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWRKRP---------LYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred ccccccccccc---------hHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 59999996443 4569999999999999953 2 4789999876543 355666666554432 3
Q ss_pred ccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccC
Q 010960 193 VASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (496)
Q Consensus 193 ~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~ 229 (496)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 4456799999999987554323333333445565554
No 46
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.59 E-value=0.01 Score=55.31 Aligned_cols=62 Identities=21% Similarity=0.220 Sum_probs=49.3
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccCCC
Q 010960 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLT 208 (496)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hcs 208 (496)
...+-|.++|..|+..||++||+|+.=-.| +.|||.|- -.+|.||++..++ . +.|.||.=..
T Consensus 10 ~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~------~--~~i~leiK~~ 71 (189)
T cd08556 10 EAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG------G--VGLNIELKEP 71 (189)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc------C--cEEEEEECCC
Confidence 445889999999999999999999995444 47999998 7789999987776 2 4455555554
No 47
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.53 E-value=0.0073 Score=58.64 Aligned_cols=39 Identities=21% Similarity=0.328 Sum_probs=33.8
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
-+-|.++|..|+..|+.+||+|++=-.| +.+||.|-.||
T Consensus 12 pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 12 PENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 4778999999999999999999997555 57999998765
No 48
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.52 E-value=0.012 Score=57.76 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
.-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 34778999999999999999999996444 47999998876
No 49
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.47 E-value=0.0041 Score=60.12 Aligned_cols=41 Identities=22% Similarity=0.249 Sum_probs=32.5
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
..+.|.++|..|+..|+++||+|||=-.| +.|||.|..++-
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l~ 48 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTLD 48 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBST
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCeee
Confidence 34889999999999999999999996555 579999986543
No 50
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.21 E-value=0.012 Score=57.07 Aligned_cols=40 Identities=13% Similarity=0.227 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
.-+.|..+|..|+..||..||+||+=-.| +.|||.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 34778999999999999999999996555 57999998876
No 51
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=96.17 E-value=0.029 Score=54.87 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
.-+.|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 45789999999999999999999996555 47999998765
No 52
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.95 E-value=0.027 Score=55.86 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=34.8
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
=+-|.++|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 3678999999999999999999996555 579999999873
No 53
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=95.85 E-value=0.043 Score=56.07 Aligned_cols=137 Identities=18% Similarity=0.275 Sum_probs=89.6
Q ss_pred CCCCCCcccceecccCccccc--C-CCCC---CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHH
Q 010960 109 HDMTAPVSHYFIYTGHNSYLT--G-NQLN---SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (496)
Q Consensus 109 qDM~~PLshYFIsSSHNTYL~--g-~Ql~---g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~Frd 182 (496)
-|-+.||++=.|--||||.-. | ..+. +..-...+..=|..|+|.+.|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 456789999999999997642 2 2111 1222223566789999999998843 257999963 2468999
Q ss_pred HHHHHhhhhhccCCCceEEeeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhcc-CcEEEecCC
Q 010960 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKP 254 (496)
Q Consensus 183 Vi~aI~~~AF~~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~L~~~~~~~~~~lPSP~~Lk-~KILIK~K~ 254 (496)
|++.|+++-=....=-|||++......+-.....+.|.+.||+.|+.+. ...... +.++|. .+|||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcC
Confidence 9999998643333345999996554322222355788999999998652 222122 677775 455665554
No 54
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.58 E-value=0.065 Score=52.98 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.3
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
-+-+..++.+|+..||..||+|+|=-.| +.|||.|=.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 3678999999999999999999995444 47999998776
No 55
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=95.58 E-value=0.11 Score=53.18 Aligned_cols=139 Identities=17% Similarity=0.212 Sum_probs=88.2
Q ss_pred CCCcccceecccCcccccCCCCCCCCChHHHHHHHhcCCcEEEEEe---ecC----CCCCCceEeecCcccccchHHHHH
Q 010960 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI---WPN----SKKDNVDVLHGGTMTAPVELIKCL 184 (496)
Q Consensus 112 ~~PLshYFIsSSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDc---WdG----~~~~ePvV~HG~TlTs~I~FrdVi 184 (496)
+.||++..|--|||+.-.+---.+..-......=|..|+|.+.|=| ++. ....+-.++|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 6799999999999976443211122222235567899999988765 211 01123345555 34567999999
Q ss_pred HHHhhhhhccCCCceEEeecc-----CC-CHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhcc---CcEEEecC
Q 010960 185 RSIKEYAFVASEYPVVITLED-----HL-TPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLK---RRIIISTK 253 (496)
Q Consensus 185 ~aI~~~AF~~S~yPvILSlE~-----Hc-s~~qQ~~mA~il~~ilGd~L~~~~--~~~~~~lPSP~~Lk---~KILIK~K 253 (496)
+.|+.+.=....=-|||++-+ || .+++ ....+.+.++||+.-+.+. ......-|+.++|. .++||-.+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~-~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSA-QEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhH-HHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999987655556679999943 44 4555 5777788999987544432 11123457899984 45555554
No 56
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=95.17 E-value=0.075 Score=52.67 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=33.1
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 136 ~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
+-|..+|..|+..||+.||+|+.=-.| +.|||.|=.|+
T Consensus 15 ENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 15 ENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 678899999999999999999997555 57999997665
No 57
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=94.99 E-value=0.11 Score=50.82 Aligned_cols=40 Identities=23% Similarity=0.439 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
.-+-|..++..|+..||+.||+|++=-.| ++|||.|=.|+
T Consensus 12 ~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l 51 (226)
T cd08568 12 YPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENL 51 (226)
T ss_pred CCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcc
Confidence 44778999999999999999999996544 47999997765
No 58
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.92 E-value=0.12 Score=51.71 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=33.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~T 173 (496)
.-+-|..+|..|+..|+..||+|||=-.| +.|||+|..|
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 45778999999999999999999995444 4799999863
No 59
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=94.91 E-value=0.11 Score=43.95 Aligned_cols=62 Identities=13% Similarity=0.340 Sum_probs=48.9
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEV--QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 26 ei~~lf~~y~~~----~~lt~~~l~~FL~~e--Q~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
.|-.+|.+|++. ++|+.++|+..|..+ .++. .+.+++.++++..... ..+.++++.|..+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~d------~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDRN------KDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCC------CCCCCcHHHHHHHHH
Confidence 477899999972 599999999999753 4654 6889999999876421 246899999998875
No 60
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=94.36 E-value=0.047 Score=54.88 Aligned_cols=41 Identities=20% Similarity=0.314 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs 176 (496)
-+-|.++|..|+..||++||+|++=-.| ++|||.|-.||..
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r 54 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLDR 54 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCcccc
Confidence 4678999999999999999999997655 5799999988643
No 61
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.25 E-value=0.049 Score=53.92 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
.-+-|.++|.+|+..||++||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 34778999999999999999999995444 479999998874
No 62
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=94.21 E-value=0.19 Score=48.63 Aligned_cols=47 Identities=15% Similarity=0.124 Sum_probs=41.7
Q ss_pred ChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHh
Q 010960 138 SDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (496)
Q Consensus 138 S~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~ 188 (496)
+..++.+|+.. .-||+|++.- | +++||.|=.|+..-.+|++|++++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 47899999998 9999999976 5 5799999999988888999998774
No 63
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=93.63 E-value=0.64 Score=49.41 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=68.6
Q ss_pred HHHHHhcCCcEEEEEeecCC-CCCCceEeecCcccccchHHHHHHHHhhhhhcc--CCCceEEeeccC---CCHHHHHHH
Q 010960 142 IIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA--SEYPVVITLEDH---LTPDLQAKV 215 (496)
Q Consensus 142 Y~~aL~~GCRCVElDcWdG~-~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~--S~yPvILSlE~H---cs~~qQ~~m 215 (496)
...=|..|+|.+.|=|=-.+ +.++-.++||.. .++|.||++.|+++.=.. ..=-|||.+-.. =....|.+.
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 34557889999888774322 224566777652 478999999999854332 234577777542 234555566
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCChhhcc-----CcEEEecCCC
Q 010960 216 AEMVTQTLGEILFTPGSECLKEFPSPESLK-----RRIIISTKPP 255 (496)
Q Consensus 216 A~il~~ilGd~L~~~~~~~~~~lPSP~~Lk-----~KILIK~K~~ 255 (496)
.+.|++ |||+|+ |+.... . -+.++|- .+|+|-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 666766 999987 433322 2 3888886 6788887543
No 64
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=93.40 E-value=0.087 Score=52.62 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
-+-+..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 15 PENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 4678899999999999999999996555 579999998873
No 65
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.18 E-value=0.11 Score=51.80 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
-+-|..++..|+..||..||+|||=-.| +.|||.|-.||.
T Consensus 14 pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l~ 53 (256)
T cd08601 14 PEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETLD 53 (256)
T ss_pred CCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCccc
Confidence 4788999999999999999999997555 579999998873
No 66
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=93.04 E-value=0.13 Score=54.28 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
.=+.|.++|..|+..|+.-||+|||=-.| +.|||.|..+|.
T Consensus 39 ~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 39 LPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 34788999999999999999999996555 479999998764
No 67
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=92.88 E-value=0.13 Score=52.77 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
-+-+..++..|+..||+.||+|+|=-.| ++|||.|=.|+.
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l~ 79 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENLL 79 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCcccc
Confidence 3678899999999999999999996444 579999988763
No 68
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.74 E-value=0.13 Score=50.71 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 3678899999999999999999997555 579999998874
No 69
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=92.69 E-value=0.15 Score=51.71 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=38.8
Q ss_pred cccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc
Q 010960 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (496)
Q Consensus 127 YL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs 176 (496)
|+.+.-+.=+-+..+|..|+..|+..||+||+=-.| +.|||+|=.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeEe
Confidence 444334455889999999999999999999996444 5799999988743
No 70
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=92.62 E-value=0.17 Score=51.23 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=34.9
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|=.|+.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 344678899999999999999999996444 479999988763
No 71
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=92.52 E-value=0.15 Score=52.91 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=35.7
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
+.-+.+.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 345788999999999999999999996544 479999998873
No 72
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=92.38 E-value=0.15 Score=51.10 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
.-+-|..+|..|+..||..||+|+|=-.| ++|||.|-.+|
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 34778999999999999999999996555 47999999877
No 73
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=92.22 E-value=0.16 Score=51.41 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=33.6
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 136 ~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
+-+..++..|+..||..||+|||=-.| +.|||+|=.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 578899999999999999999996544 57999999888
No 74
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=91.79 E-value=0.17 Score=51.19 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.6
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 136 ~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
+-+..++..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 788999999999999999999996544 579999998875
No 75
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=91.79 E-value=0.17 Score=51.67 Aligned_cols=40 Identities=18% Similarity=0.176 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
=+.|..+|..|+..||..||+||+=-.| +.|||.|-.+|-
T Consensus 14 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 14 PEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred ccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 4778999999999999999999996555 579999988763
No 76
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=91.77 E-value=0.18 Score=51.97 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
-+.+..+|..|+..|+..||+|++=-.| +.+||.|-.+|.
T Consensus 14 PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~ 53 (302)
T cd08571 14 PDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLD 53 (302)
T ss_pred CcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhc
Confidence 3678999999999999999999996555 479999998874
No 77
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=91.55 E-value=0.21 Score=51.87 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
.-+.+..+|..|+..||..||+||+=-.| ++|||.|-.||.
T Consensus 39 aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 39 APENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 35788999999999999999999997555 579999998764
No 78
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=91.38 E-value=0.29 Score=48.09 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
.-+.|..||.+|+..|++.||+|+.=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 34788999999999999999999995444 479999988764
No 79
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=91.33 E-value=0.21 Score=49.60 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=35.1
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
.-+-|..++..|+..|+..||+||.=-.| +.|||.|=.||.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 34678999999999999999999996555 579999988875
No 80
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=90.98 E-value=0.69 Score=38.79 Aligned_cols=62 Identities=18% Similarity=0.302 Sum_probs=46.9
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCC----HHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKAS----KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 26 ei~~lf~~y~~~----~~lt~~~l~~FL~~eQ~e~~~~----~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
.|..+|.+|+.. ..|+.++|+..|...-++ ..+ .+.+..++..+.. -..+.++++.|..++.
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~------d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT------NQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 477899999954 589999999999864443 244 7788888887641 1246899999998775
No 81
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=90.67 E-value=0.27 Score=50.79 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=36.2
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc
Q 010960 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (496)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs 176 (496)
+.-+.+..+|..|+..||..||+||+=-.| ++|||.|-.+|..
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~r 54 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELSG 54 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCcccc
Confidence 345788999999999999999999996555 5799999988643
No 82
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=90.59 E-value=0.36 Score=47.49 Aligned_cols=39 Identities=23% Similarity=0.134 Sum_probs=34.0
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl 174 (496)
-+-|..++..|++.|++-||+|++=-.| +.+||.|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcC
Confidence 3778999999999999999999996555 57999998876
No 83
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=90.10 E-value=1.4 Score=37.79 Aligned_cols=63 Identities=13% Similarity=0.335 Sum_probs=46.0
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 26 ei~~lf~~y~~~-~~lt~~~l~~FL~~eQ~e---~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
-|-.+|.+||++ ..|+..+|+..|+.|=.. ...+.+.+.+|++..-. -+.+.++|..|..++.
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~------n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD------CRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 467899999977 899999999999876321 11245677778776542 1346899999988765
No 84
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=89.60 E-value=1.2 Score=37.85 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=48.4
Q ss_pred HHHHHHHHhhC-C--CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 26 AVKSMFDQYSE-N--GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 26 ei~~lf~~y~~-~--~~lt~~~l~~FL~~eQ~e~~~~~-~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
.|..+|..|.. + ++|+..+|+..|..+=++ .++. +.+.++|...-. -..+.+++++|..+|.
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~------d~DG~I~F~EF~~l~~ 74 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV------NQDSKLSFEEFWELIG 74 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHH
Confidence 57889999997 4 899999999999975444 3555 789999876541 1347899999998875
No 85
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=89.54 E-value=1.7 Score=36.83 Aligned_cols=64 Identities=14% Similarity=0.286 Sum_probs=46.8
Q ss_pred hHHHHHHHHhhC--C-C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 25 DAVKSMFDQYSE--N-G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 25 ~ei~~lf~~y~~--~-~-~lt~~~l~~FL~~eQ~e---~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
.+|..+|++|.. + + .|+.++|+..|..+.++ ...+.+.+.+|++.+-. -+.+.++++.|..++.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~------n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS------NKDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC------CCCCCCCHHHHHHHHH
Confidence 357778999993 2 4 59999999999876432 12356788899987641 1346899999998775
No 86
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=89.53 E-value=0.43 Score=48.89 Aligned_cols=42 Identities=14% Similarity=0.216 Sum_probs=35.5
Q ss_pred CCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc
Q 010960 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (496)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs 176 (496)
.-+.+..+|..|+..||.-||+||+=-.| +.|||+|=.++..
T Consensus 20 ~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~r 61 (293)
T cd08572 20 IRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTISV 61 (293)
T ss_pred cCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCccee
Confidence 45778999999999999999999996555 5799999887643
No 87
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=89.29 E-value=0.44 Score=48.98 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=35.7
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
+.-+.+..+|..|+..||..||+|++=-.| +.+||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 345789999999999999999999996555 579999988773
No 88
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=89.24 E-value=1.3 Score=37.43 Aligned_cols=63 Identities=10% Similarity=0.224 Sum_probs=45.4
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQK---EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 26 ei~~lf~~y~~~----~~lt~~~l~~FL~~eQ~---e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
-|..+|.+|+.. ..|+.++|+.||..+-. ....+...+.+++..+.. -+.+.++++.|..++.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~------d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL------NSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 467889998833 38999999999998731 112345778888876541 1346899999998765
No 89
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=88.88 E-value=0.8 Score=34.20 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=39.9
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 38 GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 38 ~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
+.|+.++|+.+| ...+....+.+.+..|+..+... +.+.++++.|..+|.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHH
Confidence 568999999999 55665437889999999988632 347899999999874
No 90
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=88.25 E-value=0.57 Score=48.71 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=36.0
Q ss_pred CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc
Q 010960 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (496)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs 176 (496)
..-+-+..+|..|+..||.-||+||+=-.| +.|||.|=.||..
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~R 76 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLKR 76 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcccc
Confidence 334778999999999999999999996555 5799999988743
No 91
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=88.04 E-value=1.8 Score=36.20 Aligned_cols=64 Identities=13% Similarity=0.239 Sum_probs=48.0
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 25 ~ei~~lf~~y~-~~--~-~lt~~~l~~FL~~eQ~e~---~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
.+|..+|..|. .+ + .|+.++|+..|+.+-+.. ..+.+.+.+|+..+... ..+.++++.|..++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d------~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN------GDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHH
Confidence 57889999996 43 6 499999999998644331 24678899999887521 236799999998775
No 92
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=86.65 E-value=3.2 Score=29.99 Aligned_cols=59 Identities=20% Similarity=0.438 Sum_probs=44.9
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHh
Q 010960 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (496)
Q Consensus 27 i~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L 93 (496)
+..+|..|-.+ +.|+.++|...|+... . ..+.+.+..++.++... ..+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHh
Confidence 66788888654 7899999999998653 2 35677888888887521 23579999998876
No 93
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=86.23 E-value=1 Score=46.60 Aligned_cols=39 Identities=5% Similarity=-0.084 Sum_probs=32.4
Q ss_pred CChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcccc
Q 010960 137 CSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (496)
Q Consensus 137 SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlTs 176 (496)
++...++.|...|++.||+||+=-.| +.|||+|-+++..
T Consensus 16 ~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~~ 54 (300)
T cd08578 16 KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVPV 54 (300)
T ss_pred CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceEe
Confidence 46778999999999999999995444 4799999998743
No 94
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=85.97 E-value=3.2 Score=35.01 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=46.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 24 r~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
..++..+|..+-.+ +.|+.++|..+|+.. ..+.+.+.+|+..+... ..+.+++++|..+|.
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~~------~~g~I~~~eF~~~~~ 71 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADID------NDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcCC------CCCCcCHHHHHHHHH
Confidence 35677778888644 899999999999872 25678888888876521 246799999998776
No 95
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=85.52 E-value=0.87 Score=45.04 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=31.9
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecC
Q 010960 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 172 (496)
Q Consensus 136 ~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~ 172 (496)
+-+..+|..|+..|+.+||+|+.--.| +.+||.|=+
T Consensus 20 ENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~ 55 (257)
T COG0584 20 ENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDE 55 (257)
T ss_pred cchHHHHHHHHHcCCCEEEeeccCccC-CcEEEeccc
Confidence 678899999999999999999997555 579999987
No 96
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=85.47 E-value=0.83 Score=45.28 Aligned_cols=38 Identities=26% Similarity=0.301 Sum_probs=32.5
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 136 ~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
+-+..+|..|+..|+ -||+||+--.| +.|||.|=.|+.
T Consensus 21 ENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 21 ENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred ccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 567899999999999 89999997555 579999988764
No 97
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=84.90 E-value=0.96 Score=46.96 Aligned_cols=39 Identities=26% Similarity=0.461 Sum_probs=34.0
Q ss_pred CCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 136 ~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
+-+.++|..|+..|+..||+||+--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 667899999999999999999997555 579999998873
No 98
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=84.06 E-value=1.2 Score=47.20 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=33.3
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecC-cc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG-TM 174 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~-Tl 174 (496)
-+-+.++|..|+..|+.-||+|++=-.| +.|||.|=. +|
T Consensus 30 PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~~~L 69 (356)
T cd08560 30 PEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQCDL 69 (356)
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 4778999999999999999999996555 479999995 44
No 99
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=83.86 E-value=1 Score=34.79 Aligned_cols=59 Identities=15% Similarity=0.463 Sum_probs=41.3
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHH----HHHHhhhhhhhhhccCCCCHHHHHHHh
Q 010960 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAI----IDSLRELKHLNIFQRRGLNLEAFFKYL 93 (496)
Q Consensus 27 i~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~l----i~~~e~~~~~~~~~~~~lt~~gF~~~L 93 (496)
|..+|..|=.+ ++|+.++|..+++..... .+.+.+.+. +..+-. -+.+.+++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~------d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRD--MSDEESDEMIDQIFREFDT------DGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--STHHHHHHHHHHHHHHHTT------TSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccc--ccHHHHHHHHHHHHHHhCC------CCcCCCcHHHHhccC
Confidence 67899999543 899999999999987643 223444444 444431 135789999999874
No 100
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=83.57 E-value=1.3 Score=46.79 Aligned_cols=40 Identities=15% Similarity=0.170 Sum_probs=34.1
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
-+-+..+|..|+..||..||+|++=-.| +.|||.|=.||.
T Consensus 15 PENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 15 PENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 3677899999999999999999996544 479999988774
No 101
>PTZ00183 centrin; Provisional
Probab=83.40 E-value=5.5 Score=35.58 Aligned_cols=65 Identities=18% Similarity=0.395 Sum_probs=49.9
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhcC
Q 010960 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (496)
Q Consensus 23 ~r~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~s 95 (496)
...++..+|..|-.+ +.|+.++|..+|...+ . ..+.+.+..++..+... ..+.++++.|..++..
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~~------~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADRN------GDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHhc
Confidence 456788999988644 7899999999998654 3 46788899999887521 2356999999988863
No 102
>PTZ00184 calmodulin; Provisional
Probab=82.40 E-value=5.2 Score=35.12 Aligned_cols=65 Identities=17% Similarity=0.383 Sum_probs=44.5
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhcC
Q 010960 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (496)
Q Consensus 23 ~r~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~s 95 (496)
.+..+..+|..|-.+ +.|+.++|..+|..... ..+.+.+..++..+... ..+.++++.|..+|.+
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLTDEEVDEMIREADVD------GDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCCHHHHHHHHHhcCCC------CCCcCcHHHHHHHHhc
Confidence 345677788888533 77888888888876532 35667777777665411 2356888999888764
No 103
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=81.97 E-value=6.2 Score=33.19 Aligned_cols=63 Identities=16% Similarity=0.308 Sum_probs=46.6
Q ss_pred HHHHHHHHhhC--C-C-CcCHHHHHHHHHHHc---CCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 26 AVKSMFDQYSE--N-G-TMTVDHLHRFLIEVQ---KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 26 ei~~lf~~y~~--~-~-~lt~~~l~~FL~~eQ---~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
+|..+|..|.. + + .|+.++|+..|+.+= .....+.+++.++|...... +.+.++++.|..++.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n------~dG~v~f~eF~~li~ 78 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD------GDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHH
Confidence 68889999972 3 6 599999999998710 11235778899999876421 246899999998775
No 104
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=80.38 E-value=2.1 Score=31.62 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=23.3
Q ss_pred HHHHHHHHhh---CC-CCcCHHHHHHHHHHH
Q 010960 26 AVKSMFDQYS---EN-GTMTVDHLHRFLIEV 52 (496)
Q Consensus 26 ei~~lf~~y~---~~-~~lt~~~l~~FL~~e 52 (496)
-|..+|.+|| ++ ..|+..+|+..|+.|
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4778999999 44 899999999999865
No 105
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=79.86 E-value=8.4 Score=29.30 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=42.1
Q ss_pred HHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 28 KSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 28 ~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
..+|..+-.+ +.++.++|..+|... + .+.+.+.+++..+... ..+.++++.|...+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~-g---~~~~~~~~i~~~~d~~------~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS-G---LPRSVLAQIWDLADTD------KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC------CCCcCCHHHHHHHHH
Confidence 3567777544 899999999999864 2 3677888998876521 236799999987653
No 106
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=79.41 E-value=8.7 Score=31.54 Aligned_cols=65 Identities=15% Similarity=0.267 Sum_probs=47.6
Q ss_pred chHHHHHHHHhhC--C--CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 24 PDAVKSMFDQYSE--N--GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 24 r~ei~~lf~~y~~--~--~~lt~~~l~~FL~~eQ~e~---~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
..++..+|..|-. + +.|+.++|..+|+..=+.. ..+.+.+..++..+... ..+.++++.|...|.
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~------~~g~I~f~eF~~~~~ 78 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVN------KDGKVDFQEFLVLIG 78 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccC------CCCcCcHHHHHHHHH
Confidence 3567888999977 4 8999999999997521221 23577888888877521 236899999998876
No 107
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=77.67 E-value=8.4 Score=32.34 Aligned_cols=64 Identities=16% Similarity=0.341 Sum_probs=47.6
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 25 DAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 25 ~ei~~lf~~y~~---~-~~lt~~~l~~FL~~eQ~e---~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
.++...|..|.. + +.|+.++|+..|+..-+. ...+.+.+..++..+... ..+.++++.|..++.
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~------~dg~I~f~eF~~l~~ 78 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN------RDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC------CCCcCcHHHHHHHHH
Confidence 578889999964 3 689999999999863321 134678889999876421 246899999998775
No 108
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=76.75 E-value=3.5 Score=43.32 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT 175 (496)
-+.|..+|.+|...|+.|||+|+=..++ +.+|+.|=-|..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 3678999999999999999999999877 579999976655
No 109
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=76.66 E-value=0.64 Score=31.36 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=12.7
Q ss_pred cCCCceEEeeccCC
Q 010960 194 ASEYPVVITLEDHL 207 (496)
Q Consensus 194 ~S~yPvILSlE~Hc 207 (496)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 47899999999999
No 110
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=71.34 E-value=23 Score=36.56 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=59.3
Q ss_pred CCCcccceecccCcccc---cCCC-------CCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCccc------
Q 010960 112 TAPVSHYFIYTGHNSYL---TGNQ-------LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------ 175 (496)
Q Consensus 112 ~~PLshYFIsSSHNTYL---~g~Q-------l~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~TlT------ 175 (496)
+.||++-.|=-|||+.- .+.- -.+..-......=|..|+|-+.|-+=-..+ ++-.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~~-~~~~~~H~~~~~~~~~G~ 84 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITHG-GELWTGHYNGEDASAQGA 84 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcCC-CcEEEEecccccccccCc
Confidence 47999999999999742 2110 011222223456688999998888753222 356788876432
Q ss_pred ccchHHHHHHHHhhhhhccCCCceEEeec
Q 010960 176 APVELIKCLRSIKEYAFVASEYPVVITLE 204 (496)
Q Consensus 176 s~I~FrdVi~aI~~~AF~~S~yPvILSlE 204 (496)
+..+|.+||+.|+++.=....=-|||.+-
T Consensus 85 ~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 85 NGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 26899999999999754333334777765
No 111
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=71.24 E-value=4.8 Score=41.68 Aligned_cols=40 Identities=13% Similarity=-0.069 Sum_probs=33.6
Q ss_pred CCCChHHHHHHHhcCCc--EEEEEeecCCCCCCceEeecCccc
Q 010960 135 SDCSDVPIIRALQKGVR--VIELDIWPNSKKDNVDVLHGGTMT 175 (496)
Q Consensus 135 g~SS~e~Y~~aL~~GCR--CVElDcWdG~~~~ePvV~HG~TlT 175 (496)
-+.+.++|..|+..|+. -||+|++=-.| +.|||.|..+|.
T Consensus 14 PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkD-gvlVv~HD~~L~ 55 (299)
T cd08603 14 PDSSLFAYQFAASSSSPDVALWCDLQLTKD-GVGICLPDLNLD 55 (299)
T ss_pred CcchHHHHHHHHHcCCCCCEEEEEeeECcC-CcEEEeCCcccc
Confidence 37789999999999995 69999996555 479999998773
No 112
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=65.54 E-value=41 Score=35.00 Aligned_cols=94 Identities=27% Similarity=0.347 Sum_probs=59.6
Q ss_pred HHHHhcCCcEEEEEee---cCCCCCCceEeecCcccccchHHHHHHHHhhhhhccCCCceEEeeccC----CCHHHHHHH
Q 010960 143 IRALQKGVRVIELDIW---PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH----LTPDLQAKV 215 (496)
Q Consensus 143 ~~aL~~GCRCVElDcW---dG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~H----cs~~qQ~~m 215 (496)
..=|..|.|..-|=+= +++| .+--|+||-+.| ++.-+|+.-|+++==.+ +==||| ||.. -+..-=..+
T Consensus 73 ~~QL~~GvRylDlRi~~~~~~~D-~~~~i~HGl~~~--~~v~~vL~ev~~Fl~~h-~eEVVi-L~f~~~fg~~~~~h~~l 147 (306)
T KOG4306|consen 73 REQLVAGVRYLDLRIGYKLMDPD-REFYICHGLFST--YPVLEVLNEVRQFLSEH-PEEVVI-LEFRHFFGMTEPHHRKL 147 (306)
T ss_pred HHHHhhcceEEEEEeeeccCCCC-cceEEEeecccc--ccHHHHHHHHHHHHHhC-CCEEEE-EeccchhccCccHHHHH
Confidence 3446789999777665 2233 235899996554 45578888888753332 333333 5543 256666778
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCChhhc
Q 010960 216 AEMVTQTLGEILFTPGSECLKEFPSPESL 244 (496)
Q Consensus 216 A~il~~ilGd~L~~~~~~~~~~lPSP~~L 244 (496)
..+++++||++|+.+. ...-|+.++|
T Consensus 148 ~~~ik~~~g~~l~~d~---~~~~~~lr~L 173 (306)
T KOG4306|consen 148 VLVIKQGFGDILCDDS---LFEKPTLREL 173 (306)
T ss_pred HHHHHHHhcccccChh---hcccccHHHH
Confidence 8889999999999432 3344566665
No 113
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=64.59 E-value=13 Score=31.75 Aligned_cols=62 Identities=15% Similarity=0.303 Sum_probs=38.3
Q ss_pred HHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCC---------CCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhcCC
Q 010960 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDK---------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (496)
Q Consensus 27 i~~lf~~y~~~-~~lt~~~l~~FL~~eQ~e~~---------~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~s~ 96 (496)
.+.||..+++. +.|+...|..||++..+-+. ..+..+++.+++-. ....++++.|+.+|+++
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~--------~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ--------LSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT--------T-S-B-HHHHHHHHHT-
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC--------CCCccCHHHHHHHHHhC
Confidence 57899999976 99999999999998765432 12333333333210 23679999999999976
No 114
>PTZ00183 centrin; Provisional
Probab=62.44 E-value=30 Score=30.74 Aligned_cols=62 Identities=16% Similarity=0.355 Sum_probs=44.8
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 25 ~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
.++..+|..+-.+ +.++.++|..+|+... . ..+...+..++..+... +.+.+++++|...+.
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-~-~~~~~~~~~l~~~~d~~------~~g~i~~~eF~~~~~ 80 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLG-F-EPKKEEIKQMIADVDKD------GSGKIDFEEFLDIMT 80 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHH
Confidence 4566678777544 8899999999998663 2 24567788888776521 246799999988765
No 115
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=61.10 E-value=12 Score=32.47 Aligned_cols=29 Identities=28% Similarity=0.153 Sum_probs=22.3
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+||+|.++.. .|....+|-||+|
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v 43 (125)
T cd04031 15 TSQLIVTVLQARDLPP------RDDGSLRNPYVKV 43 (125)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCEEEE
Confidence 4689999999999864 1223578999987
No 116
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=60.79 E-value=17 Score=33.89 Aligned_cols=62 Identities=18% Similarity=0.371 Sum_probs=45.4
Q ss_pred HHHHHHHhh----CC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 27 VKSMFDQYS----EN-GTMTVDHLHRFLIEVQKED-KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 27 i~~lf~~y~----~~-~~lt~~~l~~FL~~eQ~e~-~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
|+.+|..|+ .+ ..|+-..|.+++++.+=.+ .+|..++.-|+.++... ..+.|++++|...|.
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k------~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK------GARKITFEQFLEALA 68 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S------S-SEEEHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC------CCcccCHHHHHHHHH
Confidence 567888984 33 7899999999999886432 36889999999987521 123499999998885
No 117
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=60.70 E-value=11 Score=33.85 Aligned_cols=29 Identities=34% Similarity=0.465 Sum_probs=23.4
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEecC
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~~ 496 (496)
..+|+|+|++|.+|+.+ ..+.+|.||+|.
T Consensus 27 ~~~L~V~V~~A~~L~~d-------~~g~~DPYVkV~ 55 (127)
T cd04032 27 LATLTVTVLRATGLWGD-------YFTSTDGYVKVF 55 (127)
T ss_pred cEEEEEEEEECCCCCcC-------cCCCCCeEEEEE
Confidence 57999999999999642 346789999983
No 118
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=58.68 E-value=12 Score=32.46 Aligned_cols=30 Identities=30% Similarity=0.304 Sum_probs=22.9
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEecC
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~~ 496 (496)
...|+|+||+|.+++. .|..+.+|-||+|.
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~ 44 (127)
T cd04030 15 RQKLIVTVHKCRNLPP------CDSSDIPDPYVRLY 44 (127)
T ss_pred CCEEEEEEEEEECCCC------ccCCCCCCceEEEE
Confidence 4689999999999963 13346789999873
No 119
>PTZ00184 calmodulin; Provisional
Probab=57.76 E-value=43 Score=29.17 Aligned_cols=62 Identities=15% Similarity=0.353 Sum_probs=44.4
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 25 ~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
+++...|..+-.+ +.++.++|..+|.... . ..+.+.+..++..+... ..+.++++.|..+|.
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~l~ 74 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG-Q-NPTEAELQDMINEVDAD------GNGTIDFPEFLTLMA 74 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhC-C-CCCHHHHHHHHHhcCcC------CCCcCcHHHHHHHHH
Confidence 4566677777433 8999999999997543 3 24567788888776521 236799999999876
No 120
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=57.16 E-value=14 Score=32.11 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=22.4
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+|++|+++.. .+....+|.||+|
T Consensus 14 ~~~L~V~v~~a~~L~~------~~~~~~~dpyv~v 42 (123)
T cd04035 14 NSALHCTIIRAKGLKA------MDANGLSDPYVKL 42 (123)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCceEEE
Confidence 4689999999999863 1334578999987
No 121
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=56.52 E-value=13 Score=24.85 Aligned_cols=26 Identities=12% Similarity=0.524 Sum_probs=22.2
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 010960 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (496)
Q Consensus 26 ei~~lf~~y~~~--~~lt~~~l~~FL~~ 51 (496)
||..+|..|=.+ +.++.++|...|+.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 789999999644 89999999999864
No 122
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=54.66 E-value=13 Score=24.65 Aligned_cols=26 Identities=15% Similarity=0.473 Sum_probs=21.5
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 010960 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (496)
Q Consensus 26 ei~~lf~~y~~~--~~lt~~~l~~FL~~ 51 (496)
|+..+|..|-.+ +.|+.++|+.+|++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 578899999644 89999999999973
No 123
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=50.41 E-value=58 Score=29.57 Aligned_cols=63 Identities=19% Similarity=0.403 Sum_probs=48.3
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 24 r~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
..||...|+-|-.+ +++|+.+|+.+|...-. ..+.+.+..+|..... -..+.+.+++|...+.
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~--~~~~~e~~~mi~~~d~------d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLTSLGE--KLTDEECKEMIREVDV------DGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC--cCCHHHHHHHHHhcCC------CCCCeEeHHHHHHHHh
Confidence 45999999999644 89999999999998653 3678888888876541 1235678899988775
No 124
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=50.18 E-value=47 Score=33.82 Aligned_cols=79 Identities=20% Similarity=0.280 Sum_probs=51.3
Q ss_pred CCCCCCCCChHHHHHHHhc----C-CcEEEEEeecCCCCCCceEee-cCccc-ccchHHHHHHHHhhhhhccCCCceEEe
Q 010960 130 GNQLNSDCSDVPIIRALQK----G-VRVIELDIWPNSKKDNVDVLH-GGTMT-APVELIKCLRSIKEYAFVASEYPVVIT 202 (496)
Q Consensus 130 g~Ql~g~SS~e~Y~~aL~~----G-CRCVElDcWdG~~~~ePvV~H-G~TlT-s~I~FrdVi~aI~~~AF~~S~yPvILS 202 (496)
+=|+.| ++.+.|.++.++ | +..|||-+.- |..-| |..+- ..=...+++++|++.. ++||++-
T Consensus 95 i~si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~c------P~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~vK 163 (301)
T PRK07259 95 IANVAG-STEEEYAEVAEKLSKAPNVDAIELNISC------PNVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIVK 163 (301)
T ss_pred EEEecc-CCHHHHHHHHHHHhccCCcCEEEEECCC------CCCCCCccccccCHHHHHHHHHHHHHhc----CCCEEEE
Confidence 345655 467888877754 8 9999999863 22235 33322 2335678999999854 7999998
Q ss_pred eccCCCHHHHHHHHHHHHH
Q 010960 203 LEDHLTPDLQAKVAEMVTQ 221 (496)
Q Consensus 203 lE~Hcs~~qQ~~mA~il~~ 221 (496)
|-. +.+.-..+|+.+.+
T Consensus 164 l~~--~~~~~~~~a~~l~~ 180 (301)
T PRK07259 164 LTP--NVTDIVEIAKAAEE 180 (301)
T ss_pred cCC--CchhHHHHHHHHHH
Confidence 863 33445566766654
No 125
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=49.93 E-value=22 Score=21.13 Aligned_cols=26 Identities=15% Similarity=0.478 Sum_probs=20.7
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 010960 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (496)
Q Consensus 26 ei~~lf~~y~~~--~~lt~~~l~~FL~~ 51 (496)
|+..+|..+-.+ +.++.++|..+++.
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 467888888644 78999999998864
No 126
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=49.37 E-value=47 Score=31.38 Aligned_cols=66 Identities=18% Similarity=0.412 Sum_probs=51.3
Q ss_pred CCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 21 SEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 21 ~~~r~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
-.++.||...|+-|=-+ ++++..+|++-|... ++ ..+.+.+..||..+... +.+.++++.|...+.
T Consensus 88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l-ge-~~~deev~~ll~~~d~d------~dG~i~~~eF~~~~~ 155 (160)
T COG5126 88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSL-GE-RLSDEEVEKLLKEYDED------GDGEIDYEEFKKLIK 155 (160)
T ss_pred CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhh-cc-cCCHHHHHHHHHhcCCC------CCceEeHHHHHHHHh
Confidence 34678999999999644 899999999999843 33 46788999999887622 246799999988766
No 127
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=49.10 E-value=23 Score=30.68 Aligned_cols=29 Identities=14% Similarity=0.155 Sum_probs=21.7
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+||+|++++. .|.....|-||+|
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v 43 (125)
T cd08386 15 ESTLTLKILKAVELPA------KDFSGTSDPFVKI 43 (125)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCceEEE
Confidence 4589999999999963 1223467889987
No 128
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=45.53 E-value=30 Score=33.18 Aligned_cols=100 Identities=18% Similarity=0.278 Sum_probs=65.0
Q ss_pred chHHHHHHHHhhCC---CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc--CCCC
Q 010960 24 PDAVKSMFDQYSEN---GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF--GDIN 98 (496)
Q Consensus 24 r~ei~~lf~~y~~~---~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~--s~~n 98 (496)
|.++..+|.+..+. ..++.+.|..-+...=+....+.+.+.++|+..-..+ ....+|+..|..||. +.++
T Consensus 18 k~~vi~~W~eiv~~~~i~av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~~k-----~~~~iT~~Df~~F~A~FGP~~ 92 (181)
T PF11422_consen 18 KRNVISIWEEIVQNHGIFAVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILTPK-----NTNVITIPDFYKFLARFGPEE 92 (181)
T ss_dssp HHHHHHHHHHHHSSSS--EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS--S-----S-SEEEHHHHHHHHHHSSSGG
T ss_pred HHHHHHHHHHHhcCCCcceeeHHHHHHHHHHHhccccccccchHHHHHHHHcCC-----CCceeeHHHHHHHHHHhCCch
Confidence 56788899999876 3789888888776553333457888998888654211 235789999999986 4433
Q ss_pred CCC-C---------------CCCC-ccCCCCCCcccceecccCcccc
Q 010960 99 PPL-S---------------PTPV-VHHDMTAPVSHYFIYTGHNSYL 128 (496)
Q Consensus 99 ~~~-~---------------~~~~-v~qDM~~PLshYFIsSSHNTYL 128 (496)
.++ + -+.+ ..+-|+++|+-||=+.=||=..
T Consensus 93 tim~KI~~lL~~s~~~~~wl~~~Pd~~~~~~~~i~g~f~~t~~NC~i 139 (181)
T PF11422_consen 93 TIMEKIHSLLCSSNNDGQWLYFDPDAEKNFDNSISGYFDNTEPNCFI 139 (181)
T ss_dssp GHHHHHHHHHHHHHTTTS-B-SSSSTTTTTCCS-EEEEESSSTTEEE
T ss_pred hHHHHHHHHHHhhccCCcceeeCchhhcccCcccceeeccCCCceEE
Confidence 321 0 0122 4567888999999888887443
No 129
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=44.35 E-value=14 Score=30.02 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=27.7
Q ss_pred CCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHc
Q 010960 21 SEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQ 53 (496)
Q Consensus 21 ~~~r~ei~~lf~~y~~~-~~lt~~~l~~FL~~eQ 53 (496)
..+..+|..-|+..+++ .++|.++|++-|.-+|
T Consensus 2 ~~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 2 QDSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp SSTCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCC
T ss_pred CCCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHH
Confidence 45678999999999988 9999999999887555
No 130
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=44.28 E-value=90 Score=31.37 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=56.9
Q ss_pred cCCCCCCCCChHHHHHHH----hcCCcEEEEEeecCCCCCCceEeecCc-ccccchHHHHHHHHhhhhhccCCCceEEee
Q 010960 129 TGNQLNSDCSDVPIIRAL----QKGVRVIELDIWPNSKKDNVDVLHGGT-MTAPVELIKCLRSIKEYAFVASEYPVVITL 203 (496)
Q Consensus 129 ~g~Ql~g~SS~e~Y~~aL----~~GCRCVElDcWdG~~~~ePvV~HG~T-lTs~I~FrdVi~aI~~~AF~~S~yPvILSl 203 (496)
++=|+.|. +.+.|.++. ..|+..|||.|-- + .+-.|.. +...=..++++++|++.. +.||++-|
T Consensus 101 vi~si~g~-~~~~~~~~a~~~~~~G~d~ielN~~c-P-----~~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl 169 (289)
T cd02810 101 LIASVGGS-SKEDYVELARKIERAGAKALELNLSC-P-----NVGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVKL 169 (289)
T ss_pred EEEEeccC-CHHHHHHHHHHHHHhCCCEEEEEcCC-C-----CCCCCcccccCHHHHHHHHHHHHHcc----CCCEEEEe
Confidence 44566553 445554433 4599999999863 1 1112332 223345678999999743 79999998
Q ss_pred ccCCCHHHHHHHHHHHHHHhhccccC
Q 010960 204 EDHLTPDLQAKVAEMVTQTLGEILFT 229 (496)
Q Consensus 204 E~Hcs~~qQ~~mA~il~~ilGd~L~~ 229 (496)
-..-+.+.=..+|+.+.+.=-|.|..
T Consensus 170 ~~~~~~~~~~~~a~~l~~~Gad~i~~ 195 (289)
T cd02810 170 SPYFDLEDIVELAKAAERAGADGLTA 195 (289)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 88777777777787776542254544
No 131
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=43.20 E-value=87 Score=29.60 Aligned_cols=63 Identities=10% Similarity=0.351 Sum_probs=46.3
Q ss_pred CchHHHHH---HHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 23 APDAVKSM---FDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 23 ~r~ei~~l---f~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
++.+|+++ |..+..+ +.|+..+|...|+.-+.. .+...+..|++.+- . +...|++..|+..|-
T Consensus 15 t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~--~s~~ei~~l~~~~d------~-~~~~idf~~Fl~~ms 82 (160)
T COG5126 15 TEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFN--PSEAEINKLFEEID------A-GNETVDFPEFLTVMS 82 (160)
T ss_pred CHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCC--CcHHHHHHHHHhcc------C-CCCccCHHHHHHHHH
Confidence 44555555 5554443 899999999999976654 57888888888754 1 347899999998875
No 132
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=42.38 E-value=35 Score=29.59 Aligned_cols=29 Identities=21% Similarity=0.240 Sum_probs=21.7
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+|++|.++.. .|....+|-||+|
T Consensus 15 ~~~L~V~v~~a~~L~~------~d~~~~~dpyv~v 43 (124)
T cd08385 15 SNQLTVGIIQAADLPA------MDMGGTSDPYVKV 43 (124)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCCEEEE
Confidence 4589999999999863 1223468999987
No 133
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=42.31 E-value=34 Score=29.68 Aligned_cols=29 Identities=21% Similarity=0.168 Sum_probs=21.6
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+||+|.++.. .|....+|-||+|
T Consensus 15 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v 43 (124)
T cd08387 15 MGILNVKLIQARNLQP------RDFSGTADPYCKV 43 (124)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCCeEEE
Confidence 3589999999999863 1223467889987
No 134
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=40.84 E-value=33 Score=30.44 Aligned_cols=29 Identities=24% Similarity=0.216 Sum_probs=21.9
Q ss_pred ceEEEEEEEecCCCCC-CCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYY-DFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~-~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+||+|.+++. +.. -..+|-||+|
T Consensus 15 ~~~L~V~Vi~a~~L~~~~~~------~~~~DpyV~v 44 (128)
T cd08388 15 KKALLVNIIECRDLPAMDEQ------SGTSDPYVKL 44 (128)
T ss_pred CCEEEEEEEEeECCCCCCCC------CCCcCCEEEE
Confidence 4589999999999974 221 1467889987
No 135
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=40.30 E-value=1e+02 Score=27.97 Aligned_cols=65 Identities=15% Similarity=0.302 Sum_probs=51.4
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhcCCC
Q 010960 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (496)
Q Consensus 25 ~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~s~~ 97 (496)
.++..+|..|-.+ ++++..+|...|+.-... .+.+....+++++... ..+.++++.|...|....
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~d------g~g~I~~~eF~~l~~~~~ 74 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN--PTEEELRDLIKEIDLD------GDGTIDFEEFLDLMEKLG 74 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCCC------CCCeEcHHHHHHHHHhhh
Confidence 5788889998543 899999999999987655 5788899999887521 246899999999887443
No 136
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=40.18 E-value=36 Score=29.24 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=21.6
Q ss_pred ceEEEEEEEecCCCCC-CCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYY-DFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~-~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+|++|.+++. +. ....+|-||+|
T Consensus 13 ~~~L~V~v~~a~~L~~~~~------~~~~~dpyv~v 42 (123)
T cd08521 13 TGSLEVHIKECRNLAYADE------KKKRSNPYVKV 42 (123)
T ss_pred CCEEEEEEEEecCCCCcCC------CCCCCCcEEEE
Confidence 4689999999999974 20 12367889987
No 137
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=36.78 E-value=44 Score=31.09 Aligned_cols=29 Identities=14% Similarity=0.038 Sum_probs=22.5
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~ 495 (496)
...|.|+|++|.+++.. |....+|-||+|
T Consensus 26 ~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv 54 (162)
T cd04020 26 TGELHVWVKEAKNLPAL------KSGGTSDSFVKC 54 (162)
T ss_pred CceEEEEEEeeeCCCCC------CCCCCCCCEEEE
Confidence 56899999999999741 224578889987
No 138
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=36.50 E-value=1.4e+02 Score=26.46 Aligned_cols=60 Identities=17% Similarity=0.272 Sum_probs=42.7
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 23 ~r~ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
-+.+|...|..+=.+ +.|+.++|..++ . + .....+..+++.+-.. +.+.||++.|...|.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-~--~~e~~~~~f~~~~D~n------~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR---L-D--PNEHCIKPFFESCDLD------KDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-c--chHHHHHHHHHHHCCC------CCCCCCHHHHHHHHh
Confidence 346688889998644 899999999987 2 1 1234556677766411 347899999999885
No 139
>PTZ00466 actin-like protein; Provisional
Probab=36.20 E-value=44 Score=35.46 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=38.6
Q ss_pred HHHHHHHhhhhhc-----cCCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 010960 181 IKCLRSIKEYAFV-----ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (496)
Q Consensus 181 rdVi~aI~~~AF~-----~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd 225 (496)
.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-
T Consensus 86 wd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~ 135 (380)
T PTZ00466 86 WNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNV 135 (380)
T ss_pred HHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCC
Confidence 5777888888873 36899999988888999999999999999986
No 140
>PF09441 Abp2: ARS binding protein 2; InterPro: IPR018562 This DNA-binding protein binds to the autonomously replicating sequence (ARS) binding element. It may play a role in regulating the cell cycle response to stress signals [].
Probab=34.83 E-value=91 Score=29.58 Aligned_cols=86 Identities=19% Similarity=0.384 Sum_probs=49.0
Q ss_pred eeeeecccCCcCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCC------------------CCHHHHHHHHHHH
Q 010960 9 CFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDK------------------ASKEDAQAIIDSL 70 (496)
Q Consensus 9 ~~~~~~~~~~~~~~~r~ei~~lf~~y~~~~~lt~~~l~~FL~~eQ~e~~------------------~~~~~~~~li~~~ 70 (496)
-+||.|-|.++..+.-.||...|..---.+.=+..-|..|.--.|-+.. ...++..+-|++|
T Consensus 20 ~FilyCNP~vP~~tdT~~Lr~aFr~pPkS~Gk~Fs~~~Lf~LI~k~~~keikTW~~La~~LGVepp~~ek~qStQKvqQY 99 (175)
T PF09441_consen 20 AFILYCNPAVPLDTDTSELREAFRSPPKSDGKSFSTFTLFELIRKLESKEIKTWAQLALELGVEPPDPEKGQSTQKVQQY 99 (175)
T ss_pred eeeeecCCCCCCCCCHHHHHHHhcCCCCcCCccchHHHHHHHHHHHhhhhHhHHHHHHHHhCCCCCCcccccchHHHHHH
Confidence 3588899999888888899999987632222222233333322221110 1123344445555
Q ss_pred hhhhhhhhhcc--CCCCHHHHHHHhcCCCCC
Q 010960 71 RELKHLNIFQR--RGLNLEAFFKYLFGDINP 99 (496)
Q Consensus 71 e~~~~~~~~~~--~~lt~~gF~~~L~s~~n~ 99 (496)
. .+ .++ +.|.+|.|..||+...|+
T Consensus 100 a-VR----LKRWM~aMHVDAFFeYllg~~~~ 125 (175)
T PF09441_consen 100 A-VR----LKRWMRAMHVDAFFEYLLGKPHP 125 (175)
T ss_pred H-HH----HHHHHHHhhHHHHHHHHhCCCCc
Confidence 4 11 111 478999999999966544
No 141
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=34.77 E-value=49 Score=29.20 Aligned_cols=30 Identities=23% Similarity=0.259 Sum_probs=21.8
Q ss_pred ceEEEEEEEecCCCCC-CCCCCcccccCCCCceEecC
Q 010960 461 KKTLKVTVYMGEGWYY-DFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~-~~~~~~~~~~~~~~~~~~~~ 496 (496)
...|.|+||+|+++.. |. ....+|-||+|.
T Consensus 14 ~~~L~V~Vi~a~~L~~~~~------~~~~~DpyVkv~ 44 (125)
T cd04029 14 TQSLNVHVKECRNLAYGDE------AKKRSNPYVKTY 44 (125)
T ss_pred CCeEEEEEEEecCCCccCC------CCCCCCcEEEEE
Confidence 4579999999999963 21 124678899873
No 142
>PRK09071 hypothetical protein; Validated
Probab=34.18 E-value=30 Score=36.23 Aligned_cols=60 Identities=17% Similarity=0.285 Sum_probs=37.1
Q ss_pred cCCCCCCCCCh--HHHHHHHhcCCcEE----EEE--eecCCCC---------------CCceEeecC-cccccc-hHHHH
Q 010960 129 TGNQLNSDCSD--VPIIRALQKGVRVI----ELD--IWPNSKK---------------DNVDVLHGG-TMTAPV-ELIKC 183 (496)
Q Consensus 129 ~g~Ql~g~SS~--e~Y~~aL~~GCRCV----ElD--cWdG~~~---------------~ePvV~HG~-TlTs~I-~FrdV 183 (496)
++-.++|++-- .++.+|++.-|.-+ .|| |++|.++ +-||+-||. ..||+. .-.||
T Consensus 48 ~alr~kgeT~eEi~g~~~a~r~~~~~~~~~~~iD~~~gtG~d~~~~~~~~~a~vlA~~G~~V~kHGnr~~ssk~g~saDv 127 (323)
T PRK09071 48 MLLRVKEETAEELAGFVEAIRERLQAPPLAVDLDWPSYAGKRRHLPWYLLAAKLLAQNGYRVLLHGGGGHTAGRLYTEQL 127 (323)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhcccCCCCCceecCCcCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCCcccHHHH
Confidence 33344455443 36788887655433 366 6777653 358999997 455564 37788
Q ss_pred HHHHh
Q 010960 184 LRSIK 188 (496)
Q Consensus 184 i~aI~ 188 (496)
++++.
T Consensus 128 LeaLG 132 (323)
T PRK09071 128 LEALG 132 (323)
T ss_pred HHHCC
Confidence 87763
No 143
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=33.76 E-value=59 Score=27.97 Aligned_cols=29 Identities=14% Similarity=0.116 Sum_probs=21.1
Q ss_pred ceEEEEEEEecCCCCC-CCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYY-DFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~-~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+||+|.++.. ++ ....+|-||+|
T Consensus 13 ~~~L~V~v~~a~~L~~~~~------~~~~~dpyV~v 42 (123)
T cd08390 13 EEQLTVSLIKARNLPPRTK------DVAHCDPFVKV 42 (123)
T ss_pred CCEEEEEEEEecCCCCccC------CCCCCCcEEEE
Confidence 4579999999999864 21 12357889987
No 144
>PTZ00281 actin; Provisional
Probab=33.70 E-value=48 Score=35.01 Aligned_cols=47 Identities=17% Similarity=0.167 Sum_probs=39.2
Q ss_pred HHHHHHHHhhhhhc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhcc
Q 010960 180 LIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226 (496)
Q Consensus 180 FrdVi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~ 226 (496)
=.|..+.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||--
T Consensus 79 dwd~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp 131 (376)
T PTZ00281 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131 (376)
T ss_pred CHHHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCc
Confidence 36777778788884 358999999777889999999999999999863
No 145
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=33.59 E-value=49 Score=29.11 Aligned_cols=28 Identities=18% Similarity=0.150 Sum_probs=20.4
Q ss_pred ceEEEEEEEecCCCCC-CCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYY-DFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~-~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+||.|.+++. +. -...|.||++
T Consensus 15 ~~~L~V~Vi~a~nL~~~~~-------~~~~d~yVk~ 43 (124)
T cd08389 15 ARKLTVTVIRAQDIPTKDR-------GGASSWQVHL 43 (124)
T ss_pred CCEEEEEEEEecCCCchhc-------CCCCCcEEEE
Confidence 4689999999999974 22 1245778885
No 146
>PTZ00452 actin; Provisional
Probab=32.77 E-value=55 Score=34.69 Aligned_cols=46 Identities=15% Similarity=0.145 Sum_probs=38.6
Q ss_pred HHHHHHHHhhhhhcc------CCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 010960 180 LIKCLRSIKEYAFVA------SEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (496)
Q Consensus 180 FrdVi~aI~~~AF~~------S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd 225 (496)
=.|.++.|=+|+|.. +++||+++=-..++..++++||++|=|.|+-
T Consensus 78 dwd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~v 129 (375)
T PTZ00452 78 SWDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNT 129 (375)
T ss_pred CHHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCC
Confidence 367788888888742 5899999966777899999999999999997
No 147
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=31.98 E-value=52 Score=34.39 Aligned_cols=45 Identities=27% Similarity=0.410 Sum_probs=35.3
Q ss_pred HHHHHHHhhhhhc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 010960 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (496)
Q Consensus 181 rdVi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd 225 (496)
.|.++.|=+|+|. .+++||||+.-.+++..++++|+++|-|.||-
T Consensus 73 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~ 123 (393)
T PF00022_consen 73 WDALEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGV 123 (393)
T ss_dssp HHHHHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--
T ss_pred ccccccccccccccccccccccceeeeeccccCCchhhhhhhhhhhccccc
Confidence 4667777777775 47899999999999999999999999999986
No 148
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=31.59 E-value=56 Score=29.11 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=22.7
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEecC
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~~ 496 (496)
...|.|+||.+.+++.-. .-..+|.||+|+
T Consensus 13 ~~~L~V~V~~arnL~~~~------~~~~~dpyVKv~ 42 (124)
T cd08680 13 DSSLVISVEQLRNLSALS------IPENSKVYVRVA 42 (124)
T ss_pred CCEEEEEEeEecCCcccc------cCCCCCeEEEEE
Confidence 357999999999997521 123689999984
No 149
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=30.87 E-value=63 Score=28.36 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=21.9
Q ss_pred ceEEEEEEEecCCCCC-CCCCCcccccCCCCceEecC
Q 010960 461 KKTLKVTVYMGEGWYY-DFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~-~~~~~~~~~~~~~~~~~~~~ 496 (496)
...|.|+||.+.+++. |+.. ..+|-||+|+
T Consensus 14 ~~~L~V~vi~a~~L~~~d~~~------g~~dpyVkv~ 44 (125)
T cd08393 14 LRELHVHVIQCQDLAAADPKK------QRSDPYVKTY 44 (125)
T ss_pred CCEEEEEEEEeCCCCCcCCCC------CCCCcEEEEE
Confidence 3589999999999974 3321 3578899873
No 150
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=30.57 E-value=59 Score=33.87 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=37.3
Q ss_pred HHHHHHHhhhhhc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 010960 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (496)
Q Consensus 181 rdVi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd 225 (496)
.|+++.|=+|.|. .+.+||+|+.-...+..+++.|+++|-|.||-
T Consensus 74 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~ 124 (373)
T smart00268 74 WDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNF 124 (373)
T ss_pred HHHHHHHHHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 5777777777776 25799999977777899999999999999985
No 151
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=30.11 E-value=1.8e+02 Score=28.03 Aligned_cols=60 Identities=15% Similarity=0.319 Sum_probs=42.1
Q ss_pred CchHHHHHHHHhh----C-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCC-CCHHHHHHHhc
Q 010960 23 APDAVKSMFDQYS----E-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRG-LNLEAFFKYLF 94 (496)
Q Consensus 23 ~r~ei~~lf~~y~----~-~-~~lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~-lt~~gF~~~L~ 94 (496)
++.||..|+.+|. . + ++||.++|..-..-.+ .+ -+.+||+.+.... .+. +++.+|.+.|.
T Consensus 28 s~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~-Np-----~~~rI~~~f~~~~------~~~~v~F~~Fv~~ls 94 (187)
T KOG0034|consen 28 SANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELAL-NP-----LADRIIDRFDTDG------NGDPVDFEEFVRLLS 94 (187)
T ss_pred CHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhc-Cc-----HHHHHHHHHhccC------CCCccCHHHHHHHHh
Confidence 3678888877664 3 3 7899999999884333 22 4678888887321 123 99999999885
No 152
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=29.18 E-value=40 Score=25.79 Aligned_cols=29 Identities=21% Similarity=0.168 Sum_probs=21.5
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhcCCcEEE
Q 010960 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIE 154 (496)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRCVE 154 (496)
++++|+|.. +....+-|..|...|+.+|-
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~ 60 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVS 60 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEEC
Confidence 448899987 45567899999999998874
No 153
>PLN02591 tryptophan synthase
Probab=28.81 E-value=43 Score=33.79 Aligned_cols=94 Identities=21% Similarity=0.220 Sum_probs=55.2
Q ss_pred CCCChHH---HHHHH-hcCCcEEEEEee-cCCCCCCceEeec--CcccccchHHHHHHHHhhhhhccCCCceEEeeccCC
Q 010960 135 SDCSDVP---IIRAL-QKGVRVIELDIW-PNSKKDNVDVLHG--GTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL 207 (496)
Q Consensus 135 g~SS~e~---Y~~aL-~~GCRCVElDcW-dG~~~~ePvV~HG--~TlTs~I~FrdVi~aI~~~AF~~S~yPvILSlE~Hc 207 (496)
|.-+.+. ++++| ..||-.|||.+= .-|--+.|+|..- ..|...++++++++.+++.. ...+-|+||- -..
T Consensus 11 G~P~~e~~~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r-~~~~~p~ilm--~Y~ 87 (250)
T PLN02591 11 GDPDLDTTAEALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTTLDSVISMLKEVA-PQLSCPIVLF--TYY 87 (250)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCCEEEE--ecc
Confidence 4444444 34444 579999999773 1122234777644 45777888999999999977 3467796532 233
Q ss_pred CHHHH---HHHHHHHHHHhhccccCCC
Q 010960 208 TPDLQ---AKVAEMVTQTLGEILFTPG 231 (496)
Q Consensus 208 s~~qQ---~~mA~il~~ilGd~L~~~~ 231 (496)
++=.| ++..+-+++.=-|-|+.|+
T Consensus 88 N~i~~~G~~~F~~~~~~aGv~GviipD 114 (250)
T PLN02591 88 NPILKRGIDKFMATIKEAGVHGLVVPD 114 (250)
T ss_pred cHHHHhHHHHHHHHHHHcCCCEEEeCC
Confidence 33333 3444444554334455553
No 154
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=28.45 E-value=96 Score=23.85 Aligned_cols=46 Identities=17% Similarity=0.259 Sum_probs=31.8
Q ss_pred cCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHh
Q 010960 40 MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (496)
Q Consensus 40 lt~~~l~~FL~~eQ~e~~~~~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L 93 (496)
|+..+++.||+...= .++.+.|..|+++... -+.+.|..+.|..|.
T Consensus 2 msf~Evk~lLk~~NI--~~~~~yA~~LFq~~D~------s~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNI--EMDDEYARQLFQECDK------SQSGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT------HHHHHHHHHHH-S------SSSSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHcc--CcCHHHHHHHHHHhcc------cCCCCccHHHHHHHH
Confidence 788999999996553 3678999999988652 123678888887764
No 155
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=28.13 E-value=73 Score=28.36 Aligned_cols=30 Identities=23% Similarity=0.347 Sum_probs=22.1
Q ss_pred ceEEEEEEEecCCCCC-CCCCCcccccCCCCceEecC
Q 010960 461 KKTLKVTVYMGEGWYY-DFPHTHFDAYSPPDFYARVC 496 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~-~~~~~~~~~~~~~~~~~~~~ 496 (496)
...|.|+|+.+.++.. |.. ...+|-||+|.
T Consensus 14 ~~~L~V~V~~a~nL~~~d~~------~g~~dpYVkv~ 44 (128)
T cd08392 14 TSCLEITIKACRNLAYGDEK------KKKCHPYVKVC 44 (128)
T ss_pred CCEEEEEEEecCCCCccCCC------CCCCCeEEEEE
Confidence 4689999999999964 221 13678899973
No 156
>PTZ00004 actin-2; Provisional
Probab=27.54 E-value=83 Score=33.24 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=37.0
Q ss_pred HHHHHHHhhhhhc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhcc
Q 010960 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226 (496)
Q Consensus 181 rdVi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd~ 226 (496)
.|+++.|=+|+|. .+++||+|+--.+.+..++++|+++|-|.||-.
T Consensus 80 ~d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~ 131 (378)
T PTZ00004 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVP 131 (378)
T ss_pred HHHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCc
Confidence 4666677777763 368999999767778899999999999999964
No 157
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=26.89 E-value=1e+02 Score=30.30 Aligned_cols=40 Identities=15% Similarity=0.129 Sum_probs=33.2
Q ss_pred CcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHhhhhhc
Q 010960 150 VRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFV 193 (496)
Q Consensus 150 CRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~ 193 (496)
+=+|-||+.+| -.++++||.-.+.+...+.++...+..+.
T Consensus 123 ~ivvslD~~~g----~~v~~~gw~~~~~~~~~~~~~~~~~~g~~ 162 (229)
T PF00977_consen 123 RIVVSLDARDG----YKVATNGWQESSGIDLEEFAKRLEELGAG 162 (229)
T ss_dssp GEEEEEEEEET----EEEEETTTTEEEEEEHHHHHHHHHHTT-S
T ss_pred cEEEEEEeeec----eEEEecCccccCCcCHHHHHHHHHhcCCc
Confidence 44666999985 25899999999999999999999988764
No 158
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=24.45 E-value=88 Score=32.60 Aligned_cols=45 Identities=20% Similarity=0.219 Sum_probs=34.8
Q ss_pred HHHHHHHhhhhhc------cCCCceEEeeccCCCHHHHHHHHHHHHHHhhc
Q 010960 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (496)
Q Consensus 181 rdVi~aI~~~AF~------~S~yPvILSlE~Hcs~~qQ~~mA~il~~ilGd 225 (496)
.|.++.|=+|.|. .+.+||+|+.-...+..++++++++|-|.||-
T Consensus 74 ~~~~e~~~~~~~~~~l~~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~ 124 (371)
T cd00012 74 WDDMEKIWDHLFFNELKVNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNV 124 (371)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCceEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 3555555555553 35899999987777889999999999999984
No 159
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=24.19 E-value=87 Score=29.07 Aligned_cols=29 Identities=31% Similarity=0.234 Sum_probs=21.6
Q ss_pred ceEEEEEEEecCCCCCCCCCCcccccCCCCceEec
Q 010960 461 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARV 495 (496)
Q Consensus 461 ~~~L~v~viSGq~~~~~~~~~~~~~~~~~~~~~~~ 495 (496)
...|+|+||+|.++.. .|.....|-||+|
T Consensus 27 ~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v 55 (153)
T cd08676 27 IFVLKVTVIEAKGLLA------KDVNGFSDPYCML 55 (153)
T ss_pred eEEEEEEEEeccCCcc------cCCCCCCCceEEE
Confidence 5689999999999863 1333467778886
No 160
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT). This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions [].
Probab=24.06 E-value=70 Score=32.73 Aligned_cols=60 Identities=27% Similarity=0.356 Sum_probs=43.3
Q ss_pred CcccceecccCc--ccccCCCCCCCCChHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCcc------cccchHHHHHH
Q 010960 114 PVSHYFIYTGHN--SYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM------TAPVELIKCLR 185 (496)
Q Consensus 114 PLshYFIsSSHN--TYL~g~Ql~g~SS~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~Tl------Ts~I~FrdVi~ 185 (496)
=++.|||-+.|| .|| +...+.|+-|= +|=+ -+|+.||-... .-.++..|++.
T Consensus 169 VvT~FFIDTA~Ni~~Yi-----------~tI~~lLkpgG------~WIN---~GPLlyh~~~~~~~~~~sveLs~eEi~~ 228 (270)
T PF07942_consen 169 VVTCFFIDTAENIIEYI-----------ETIEHLLKPGG------YWIN---FGPLLYHFEPMSIPNEMSVELSLEEIKE 228 (270)
T ss_pred EEEEEEeechHHHHHHH-----------HHHHHHhccCC------EEEe---cCCccccCCCCCCCCCcccCCCHHHHHH
Confidence 356788888888 343 34444666554 7853 24999997755 35688999999
Q ss_pred HHhhhhhc
Q 010960 186 SIKEYAFV 193 (496)
Q Consensus 186 aI~~~AF~ 193 (496)
+|.+.+|+
T Consensus 229 l~~~~GF~ 236 (270)
T PF07942_consen 229 LIEKLGFE 236 (270)
T ss_pred HHHHCCCE
Confidence 99999997
No 161
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=23.74 E-value=78 Score=20.22 Aligned_cols=23 Identities=22% Similarity=0.706 Sum_probs=18.0
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHH
Q 010960 27 VKSMFDQYSEN--GTMTVDHLHRFL 49 (496)
Q Consensus 27 i~~lf~~y~~~--~~lt~~~l~~FL 49 (496)
|+.+|..+=.+ +.++.+||..|+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 46678887544 889999999875
No 162
>PF04920 DUF656: Family of unknown function (DUF656) ; InterPro: IPR007004 This is a family of hypothetical proteins, the majority is from Beet necrotic yellow vein virus.
Probab=23.42 E-value=36 Score=29.87 Aligned_cols=20 Identities=15% Similarity=0.076 Sum_probs=15.7
Q ss_pred CCCceEee-cCcccccchHHH
Q 010960 163 KDNVDVLH-GGTMTAPVELIK 182 (496)
Q Consensus 163 ~~ePvV~H-G~TlTs~I~Frd 182 (496)
..||++.| ||-+|+++-|+-
T Consensus 12 s~~pll~~~~yd~tsr~~~~r 32 (126)
T PF04920_consen 12 SQEPLLNVTGYDLTSRVMFER 32 (126)
T ss_pred CCCccccccCccchHHHHhhh
Confidence 35798887 788999987763
No 163
>KOG1761 consensus Signal recognition particle, subunit Srp14 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.89 E-value=1.1e+02 Score=27.36 Aligned_cols=44 Identities=23% Similarity=0.237 Sum_probs=30.4
Q ss_pred HHHHHHhcC--CcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHhhhhhccCCCceEEe
Q 010960 141 PIIRALQKG--VRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVIT 202 (496)
Q Consensus 141 ~Y~~aL~~G--CRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPvILS 202 (496)
.|..+=.+| |+-|+++++||-+ .|+---| ..-.|+.++|+++|-
T Consensus 15 ~~q~~k~~g~~sv~it~k~~dgrt--k~~p~kg----------------s~~g~e~~e~~cLiR 60 (116)
T KOG1761|consen 15 LFQKSKIKGASSVYITLKRYDGRT--KPVPKKG----------------SVEGFEPSEYRCLIR 60 (116)
T ss_pred HHHhhhhcCCcceEEEEeccCCCc--ccccccC----------------CcCCCCCccceEEEE
Confidence 566666778 9999999999854 2322222 223788999999874
No 164
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=22.68 E-value=3.1e+02 Score=26.52 Aligned_cols=66 Identities=20% Similarity=0.301 Sum_probs=44.7
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCC--HHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHHhc
Q 010960 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKAS--KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (496)
Q Consensus 26 ei~~lf~~y~~~--~~lt~~~l~~FL~~eQ~e~~~~--~~~~~~li~~~e~~~~~~~~~~~~lt~~gF~~~L~ 94 (496)
=+.+.|+-|--+ ++++.++|...|+.-=++. .+ .+...+|+++--. +.+.-..+.+++++|.+++.
T Consensus 105 Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~-~~~~~e~~~~i~d~t~~--e~D~d~DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 105 KLRFAFRVYDLDGDGFISREELKQILRMMVGEN-DDMSDEQLEDIVDKTFE--EADTDGDGKISFEEFCKVVE 174 (187)
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccC-CcchHHHHHHHHHHHHH--HhCCCCCCcCcHHHHHHHHH
Confidence 477889999654 8899999999988665542 23 4555555554321 11122357899999999887
No 165
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=22.54 E-value=47 Score=30.97 Aligned_cols=65 Identities=22% Similarity=0.357 Sum_probs=44.3
Q ss_pred CCCCCChHHHHHHHhcCCc--EEEEEeecCC-------------CCCCceEeecCccc-ccchHHHHHHHHhhhhhccCC
Q 010960 133 LNSDCSDVPIIRALQKGVR--VIELDIWPNS-------------KKDNVDVLHGGTMT-APVELIKCLRSIKEYAFVASE 196 (496)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCR--CVElDcWdG~-------------~~~ePvV~HG~TlT-s~I~FrdVi~aI~~~AF~~S~ 196 (496)
+.|.-+.+.+.+.|+.-|. -++++|.-.. ++-..||---..+| ++|.++|++.++ .
T Consensus 22 iYG~~tl~~i~~~~~~~a~~~g~~v~~~QSN~EGelId~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~--------~ 93 (146)
T PRK05395 22 IYGSTTLADIEALLEEEAAELGVELEFFQSNHEGELIDRIHEARDGADGIIINPGAYTHTSVALRDALAAV--------S 93 (146)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhcccCCcEEEECchHHHHHHHHHHHHHHcC--------C
Confidence 5788888888888877555 5688886321 01123455444555 889999999887 5
Q ss_pred CceEEeeccCCC
Q 010960 197 YPVVITLEDHLT 208 (496)
Q Consensus 197 yPvILSlE~Hcs 208 (496)
.|+ +|+|.|
T Consensus 94 ~P~---VEVHiS 102 (146)
T PRK05395 94 IPV---IEVHLS 102 (146)
T ss_pred CCE---EEEecC
Confidence 665 599976
No 166
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=22.20 E-value=2.3e+02 Score=28.69 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=41.0
Q ss_pred CChHHHHHHHhcCCcEEEEEeec-----CCCCCCceEeecCcccccchHHHHHHHHh
Q 010960 137 CSDVPIIRALQKGVRVIELDIWP-----NSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (496)
Q Consensus 137 SS~e~Y~~aL~~GCRCVElDcWd-----G~~~~ePvV~HG~TlTs~I~FrdVi~aI~ 188 (496)
-|-..-..||....-+||.||== |...+.||+.|=.-.+|.++|++.+.+|.
T Consensus 12 Nsk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP~~~SdltLee~L~~v~ 68 (244)
T PF10223_consen 12 NSKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPPATDSDLTLEEWLDEVL 68 (244)
T ss_pred CCHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCCCCCCcCcHHHHHHHHh
Confidence 45556678888888899999942 23345699999766789999999999988
No 167
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=21.25 E-value=1.2e+02 Score=22.06 Aligned_cols=30 Identities=13% Similarity=0.440 Sum_probs=24.7
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 010960 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (496)
Q Consensus 22 ~~r~ei~~lf~~y~~~--~~lt~~~l~~FL~~ 51 (496)
.+..|+..||..+=.+ +.++.++|..++..
T Consensus 22 ~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 22 LSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 4567899999998644 89999999999864
No 168
>KOG2421 consensus Predicted starch-binding protein [General function prediction only]
Probab=21.15 E-value=21 Score=38.69 Aligned_cols=61 Identities=18% Similarity=0.123 Sum_probs=44.0
Q ss_pred CCCCCCccccee--cccCcccccCCCCCCCCC-----------hHHHHHHHhcCCcEEEEEeecCCCCCCceEeecCc
Q 010960 109 HDMTAPVSHYFI--YTGHNSYLTGNQLNSDCS-----------DVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (496)
Q Consensus 109 qDM~~PLshYFI--sSSHNTYL~g~Ql~g~SS-----------~e~Y~~aL~~GCRCVElDcWdG~~~~ePvV~HG~T 173 (496)
.||+.++.+||= .-|=|+|.. ..|.|- +..+-.|++.|.--||+|+---.| ..|||||+.-
T Consensus 309 ~~l~~~~~~~w~~~~~~l~~g~r---g~g~sy~~~~~~~~ent~~~~~~~~~~~ad~ve~dvqlt~D-~~~vvyh~f~ 382 (417)
T KOG2421|consen 309 VDLRPSLINYWKKNGLSLNTGHR---GNGTSYTVLSQVLRENTIVIVDNVLELGADLVEMDVQLTKD-LVPVVYHDFV 382 (417)
T ss_pred eecChHHhhhhcccchhhhccCC---cCCchhhhhhhhhccceeeeehhHHHhhhhHHHhhcccccC-Cceeeeccce
Confidence 799999999997 445555544 444333 223457889999999999986554 4699999963
No 169
>PF11478 Tachystatin_B: Antimicrobial chitin binding protein tachystatin B; InterPro: IPR020957 Tachystatin B is an antimicrobial chitin binding peptide and consists of two isotopes B1 and B2. Both structures contain a short antiparallel beta sheet with an inhibitory cysteine knot motif. Tyr(14) and Arg(17) are thought to be the essential residues for chitin binding []. ; PDB: 2DCW_A 2DCV_A.
Probab=20.43 E-value=37 Score=24.13 Aligned_cols=12 Identities=33% Similarity=0.465 Sum_probs=5.0
Q ss_pred HHHHHhcCCcEE
Q 010960 142 IIRALQKGVRVI 153 (496)
Q Consensus 142 Y~~aL~~GCRCV 153 (496)
||..|-+|+||-
T Consensus 1 yitclfrgarcr 12 (42)
T PF11478_consen 1 YITCLFRGARCR 12 (42)
T ss_dssp ----B-TT-EEE
T ss_pred CeEEEeccceEE
Confidence 788899999983
No 170
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=20.25 E-value=2.1e+02 Score=29.10 Aligned_cols=83 Identities=19% Similarity=0.252 Sum_probs=60.1
Q ss_pred ccCcccccCCCCCCCCChH-HHHHHH-hcCCcEEEEEeecCCCCCCceEeecCcccccchHHHHHHHHhhhhhccCCCce
Q 010960 122 TGHNSYLTGNQLNSDCSDV-PIIRAL-QKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPV 199 (496)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e-~Y~~aL-~~GCRCVElDcWdG~~~~ePvV~HG~TlTs~I~FrdVi~aI~~~AF~~S~yPv 199 (496)
+.+|.-|.|.-=+|+||.. +....+ ..|+|.||++=-+= ..+.++++.|+. .+|+-
T Consensus 51 pannvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~~L-----------------~~l~~l~~~l~~-----~~~kF 108 (249)
T PF05673_consen 51 PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKEDL-----------------GDLPELLDLLRD-----RPYKF 108 (249)
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHHHh-----------------ccHHHHHHHHhc-----CCCCE
Confidence 4678899999999999853 333333 35999999953331 235678888874 47888
Q ss_pred EEeeccCCCHHHHHHHHHHHHHHhhccc
Q 010960 200 VITLEDHLTPDLQAKVAEMVTQTLGEIL 227 (496)
Q Consensus 200 ILSlE~Hcs~~qQ~~mA~il~~ilGd~L 227 (496)
||=+.. .|.+....--+.||.+|---|
T Consensus 109 Ilf~DD-LsFe~~d~~yk~LKs~LeGgl 135 (249)
T PF05673_consen 109 ILFCDD-LSFEEGDTEYKALKSVLEGGL 135 (249)
T ss_pred EEEecC-CCCCCCcHHHHHHHHHhcCcc
Confidence 988885 888888888888998885433
Done!