Query 010965
Match_columns 496
No_of_seqs 159 out of 245
Neff 4.1
Searched_HMMs 13730
Date Mon Mar 25 17:59:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010965.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010965hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vf6c_ a.194.1.1 (C:) Maguk p 21.8 17 0.0012 25.8 1.4 18 294-311 29-46 (51)
2 d1xrda1 f.3.1.1 (A:1-52) Light 11.0 55 0.004 23.4 1.9 15 84-98 13-27 (52)
3 d1yu8x1 a.14.1.1 (X:42-76) Vil 7.4 32 0.0023 22.8 -0.7 12 208-219 3-14 (35)
4 d1unda_ a.14.1.1 (A:) Advillin 7.2 33 0.0024 22.8 -0.7 12 208-219 4-15 (36)
5 d2j3wa1 d.110.4.3 (A:1-140) Se 7.2 49 0.0036 27.2 0.3 43 336-382 95-137 (140)
6 d1q1ha_ a.4.5.41 (A:) Transcri 6.6 36 0.0026 26.6 -0.8 7 235-241 74-80 (88)
7 d2axtl1 f.23.31.1 (L:1-37) Pho 6.1 1.5E+02 0.011 19.5 2.2 13 90-102 22-34 (37)
8 d1iyca_ g.31.1.2 (A:) Antifung 4.9 1.1E+02 0.0079 19.8 0.9 9 69-77 15-23 (36)
9 d1lbua1 a.20.1.1 (A:1-83) Zn2+ 4.7 1.9E+02 0.014 20.9 2.4 18 369-386 40-57 (83)
10 d1ug0a_ a.217.1.1 (A:) Splicin 4.4 1.2E+02 0.0087 23.0 1.0 54 255-321 25-80 (88)
No 1
>d1vf6c_ a.194.1.1 (C:) Maguk p55 subfamily member 5, Patj {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.84 E-value=17 Score=25.82 Aligned_cols=18 Identities=50% Similarity=0.744 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHhhhhhhh
Q 010965 294 QLVLHLIHFALFQNAFQI 311 (496)
Q Consensus 294 ~llL~LIHfiLFQNAFel 311 (496)
.++|-|.|=.=|||||.|
T Consensus 29 ~l~lqLvqn~DFQnAfkI 46 (51)
T d1vf6c_ 29 SLLLQLVQNRDFQNAFKI 46 (51)
T ss_dssp HHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHH
Confidence 588889999999999976
No 2
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=10.95 E-value=55 Score=23.39 Aligned_cols=15 Identities=40% Similarity=0.625 Sum_probs=11.5
Q ss_pred hhhHHHHHHHHHHHH
Q 010965 84 ALHQLHILIFFLAVF 98 (496)
Q Consensus 84 gLHQLHIFIFvLAv~ 98 (496)
.+--+++|+|+||+.
T Consensus 13 ~lva~~~fL~~LAl~ 27 (52)
T d1xrda1 13 ALVGLATFLFVLALL 27 (52)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344578999999964
No 3
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=7.35 E-value=32 Score=22.75 Aligned_cols=12 Identities=42% Similarity=0.883 Sum_probs=8.6
Q ss_pred hhccccceecch
Q 010965 208 EDDFKIVVGVSP 219 (496)
Q Consensus 208 EdDFk~VVGIS~ 219 (496)
++||+.|.|+|.
T Consensus 3 d~dF~~vfgmsr 14 (35)
T d1yu8x1 3 DEDFKAVFGMTR 14 (35)
T ss_dssp HHHHHHHHSSCH
T ss_pred HHHHHHHHCCCH
Confidence 567777777764
No 4
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.19 E-value=33 Score=22.81 Aligned_cols=12 Identities=42% Similarity=0.736 Sum_probs=8.6
Q ss_pred hhccccceecch
Q 010965 208 EDDFKIVVGVSP 219 (496)
Q Consensus 208 EdDFk~VVGIS~ 219 (496)
++||..|.|+|.
T Consensus 4 d~dF~~vFgmsr 15 (36)
T d1unda_ 4 EQDFVSVFGITR 15 (36)
T ss_dssp HHHHHHHHSSCH
T ss_pred HHHHHHHHCcCH
Confidence 567777777774
No 5
>d2j3wa1 d.110.4.3 (A:1-140) Sedlin (SEDL) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.18 E-value=49 Score=27.15 Aligned_cols=43 Identities=19% Similarity=0.208 Sum_probs=34.0
Q ss_pred hhhhhhhccccccccccchhhHHHHhhccccccccccHHHHHHHHHH
Q 010965 336 MKVALGVGVLFLCSYITLPLYALVTQMGSQMKKSIFDEQTSKALKRW 382 (496)
Q Consensus 336 ~Rl~~Gv~vQ~LCSY~TLPLYALVTQMGS~~K~~if~e~v~~aL~~W 382 (496)
+|..+--+-++-+-|+.=|+|. .|+..+-..|+++|++..++|
T Consensus 95 i~~~~~~v~~lYv~~v~NPfy~----~~~pI~s~~Fd~~v~~~~~~~ 137 (140)
T d2j3wa1 95 IKNFFTDVYDLYIKFAMNPFYE----PNSPIRSSAFDRKVQFLGKKH 137 (140)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCC----TTCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCccCC----CCCcccCHHHHHHHHHHHHHH
Confidence 4555555556667788889994 577889999999999999998
No 6
>d1q1ha_ a.4.5.41 (A:) Transcription factor E/IIe-alpha, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=6.61 E-value=36 Score=26.65 Aligned_cols=7 Identities=43% Similarity=1.863 Sum_probs=5.0
Q ss_pred cchhhhh
Q 010965 235 GWHALFW 241 (496)
Q Consensus 235 Gw~~yfW 241 (496)
||++|+|
T Consensus 74 gw~~Y~W 80 (88)
T d1q1ha_ 74 GWFIYYW 80 (88)
T ss_dssp CCCEEEE
T ss_pred CcEEEEE
Confidence 7777777
No 7
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=6.12 E-value=1.5e+02 Score=19.53 Aligned_cols=13 Identities=38% Similarity=0.710 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHH
Q 010965 90 ILIFFLAVFHVLY 102 (496)
Q Consensus 90 IFIFvLAv~HV~Y 102 (496)
.+||||||.--.|
T Consensus 22 Llifvl~vLFssY 34 (37)
T d2axtl1 22 LLILVLALLFSSY 34 (37)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5899999876555
No 8
>d1iyca_ g.31.1.2 (A:) Antifungal peptide scarabaecin {Beetle (Oryctes rhinoceros) [TaxId: 72550]}
Probab=4.90 E-value=1.1e+02 Score=19.83 Aligned_cols=9 Identities=33% Similarity=0.785 Sum_probs=7.0
Q ss_pred ccccCCCcc
Q 010965 69 STECEKGSE 77 (496)
Q Consensus 69 ~~~C~~Gkv 77 (496)
...|++|||
T Consensus 15 rsncpkgkv 23 (36)
T d1iyca_ 15 RSNCPKGKV 23 (36)
T ss_dssp TSCCCSSCE
T ss_pred ccCCCCcce
Confidence 357999987
No 9
>d1lbua1 a.20.1.1 (A:1-83) Zn2+ DD-carboxypeptidase, N-terminal domain {Streptomyces albus G [TaxId: 1962]}
Probab=4.71 E-value=1.9e+02 Score=20.93 Aligned_cols=18 Identities=28% Similarity=0.412 Sum_probs=15.5
Q ss_pred ccccHHHHHHHHHHHHHH
Q 010965 369 SIFDEQTSKALKRWHMAV 386 (496)
Q Consensus 369 ~if~e~v~~aL~~W~~~a 386 (496)
.+|++.+.+|++.+++..
T Consensus 40 g~fg~~t~~AV~~FQ~~~ 57 (83)
T d1lbua1 40 GQFGPATKAAVQRFQSAY 57 (83)
T ss_dssp SBCCHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHHc
Confidence 489999999999998654
No 10
>d1ug0a_ a.217.1.1 (A:) Splicing factor 4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.38 E-value=1.2e+02 Score=22.96 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=33.9
Q ss_pred hhhHHHHHHHHHHHHhhcccccCcccc-cCCCcccccCC-ChHHHHHHHHHHhhhhhhhHHHHHhhhhc
Q 010965 255 TELQSILTKMALEISERHAVVQGIPLV-QGSDQYFWFGR-PQLVLHLIHFALFQNAFQITYFFWIWYSF 321 (496)
Q Consensus 255 tKLq~IIt~lalei~e~~~vv~G~p~V-~psD~~FWF~r-P~llL~LIHfiLFQNAFelAfF~W~w~~f 321 (496)
.++..||.++|.=|++.+...+-...- +.+|..|||=+ |. .=.-+|+-|-+++|
T Consensus 25 ~~~~~iI~~tA~~Vak~G~~fE~~l~~k~~~np~F~FL~d~~-------------~~~~~YY~~kl~e~ 80 (88)
T d1ug0a_ 25 AETRRVIEKLARFVAEGGPELEKVAMEDYKDNPAFTFLHDKN-------------SREFLYYRRKVAEI 80 (88)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTTCSSSHHHHCSS-------------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHhccCCCCceeeCCCC-------------CCCcHHHHHHHHHH
Confidence 368899999999998865544333222 35688899742 33 22335666666655
Done!