Query 010967
Match_columns 496
No_of_seqs 43 out of 45
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 18:01:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010967.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010967hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q5za_ a.196.1.1 (A:) Invasio 30.4 44 0.0032 28.1 6.0 91 347-452 28-132 (145)
2 d1x4pa1 a.217.1.1 (A:8-60) Arg 9.7 31 0.0023 24.9 0.1 23 350-372 2-27 (53)
3 d1utga_ a.101.1.1 (A:) Uterogl 8.6 75 0.0055 24.0 1.9 19 345-363 49-67 (70)
4 d2o4ta1 a.69.4.1 (A:16-105) Un 8.5 2.9E+02 0.021 20.9 5.6 85 399-484 3-89 (90)
5 d1lmra_ g.3.6.3 (A:) ADO1 {Ass 8.4 28 0.002 23.2 -0.5 11 461-471 12-22 (35)
6 d1n5ua2 a.126.1.1 (A:197-388) 8.1 97 0.007 26.1 2.7 34 153-186 129-162 (192)
7 d1vcta1 a.7.12.1 (A:9-107) Hyp 7.7 1.3E+02 0.0097 22.0 3.1 29 427-455 12-40 (99)
8 d1eucb1 c.23.4.1 (B:246-393) S 7.6 92 0.0067 26.0 2.3 24 348-371 56-79 (148)
9 d1q5da_ a.104.1.1 (A:) Cytochr 7.5 19 0.0014 31.1 -2.4 42 271-312 356-397 (401)
10 d1n5ua1 a.126.1.1 (A:2-196) Se 7.4 1.1E+02 0.0081 25.7 2.8 34 153-186 132-165 (195)
No 1
>d1q5za_ a.196.1.1 (A:) Invasion protein A (SipA) , C-terminal actin binding domain {Salmonella typhimurium [TaxId: 90371]}
Probab=30.44 E-value=44 Score=28.14 Aligned_cols=91 Identities=25% Similarity=0.396 Sum_probs=57.6
Q ss_pred chHHHHHHHHHHHhcCcccceeeeccccccCCccCCchHHHHHHHHhCCCCccchhh---hhhh---------Hhhhhhh
Q 010967 347 QSRDIILQLVERILSSPKARTILVNGAVRKGERLVPPSALETLLRLTFPTSSARVKA---TERF---------EAIYPTL 414 (496)
Q Consensus 347 qSrDliLQlvE~iLs~pkArtiLvngavrkgerliPP~sfeillR~tFP~ssaRvKa---teRf---------eAiyP~L 414 (496)
..|+..|..|.+-|..-.+.+.-+ | .+||.|---+.| +.|+|. -.|| .+---+|
T Consensus 28 ~Are~fLgvvRkALEPdastPf~v----R--------RaFd~LRaeILp--nD~~ks~alkaqcs~i~~~~eLk~k~~tL 93 (145)
T d1q5za_ 28 DARETFLGVIRKALEPDTSTPFPV----R--------RAFDGLRAEILP--NDTIKSAALKAQCSDIDKHPELKAKMETL 93 (145)
T ss_dssp CHHHHHHHHHHHHTCBCTTSCHHH----H--------HHHHHHHHHHSC--SSHHHHHHHHHHHTTGGGCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhcCcccCCchHH----H--------HHHHHHHHhcCC--cchhhHHHHHHHHhccCCChHHHHHHHHH
Confidence 467889999999985333333222 2 367766555666 444432 2233 4455688
Q ss_pred hHHHhcCCCCchhHHHHHHHHHHHH--HHHhccCCchhhH
Q 010967 415 KEVALAGVPGSKAMKQVSLQILSFA--IKFAGESTPDLSN 452 (496)
Q Consensus 415 KevALaG~~gskamkqv~qqif~~s--lk~age~np~Lak 452 (496)
|| +++|.|--++...++.|+--=+ +|+++|.|+.|+.
T Consensus 94 ke-~it~HPqrekLae~Alqf~REAgLt~lk~etdylls~ 132 (145)
T d1q5za_ 94 KE-VITHHPQKEKLAEIALQFAREAGLTRLKGETDYVLSN 132 (145)
T ss_dssp HH-HHHTCTTHHHHHHHHHHHHHHHCTTTTGGGSCHHHHH
T ss_pred HH-HHhcCchHHHHHHHHHHHHHHcCCCcccCcccHHHHH
Confidence 98 7999998888877776654433 4577778887764
No 2
>d1x4pa1 a.217.1.1 (A:8-60) Arginine/serine-rich-splicing factor 14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.66 E-value=31 Score=24.93 Aligned_cols=23 Identities=48% Similarity=0.694 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhc---Ccccceeeecc
Q 010967 350 DIILQLVERILS---SPKARTILVNG 372 (496)
Q Consensus 350 DliLQlvE~iLs---~pkArtiLvng 372 (496)
|+|-|||.+|.+ .||-|+.+-+.
T Consensus 2 ~tIeqlV~~ii~G~LspkeR~~~k~~ 27 (53)
T d1x4pa1 2 GTIDQLVKRVIEGSLSPKERTLLKED 27 (53)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHS
T ss_pred chHHHHHHHHHcCCCCHHHHHHhhcC
Confidence 789999999976 68888777665
No 3
>d1utga_ a.101.1.1 (A:) Uteroglobin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=8.57 E-value=75 Score=23.98 Aligned_cols=19 Identities=37% Similarity=0.690 Sum_probs=17.2
Q ss_pred CcchHHHHHHHHHHHhcCc
Q 010967 345 NPQSRDIILQLVERILSSP 363 (496)
Q Consensus 345 nPqSrDliLQlvE~iLs~p 363 (496)
.+..++-|++|+|+|+..|
T Consensus 49 t~edK~~i~~liekI~~Sp 67 (70)
T d1utga_ 49 PQTTRENIMKLTEKIVKSP 67 (70)
T ss_dssp CHHHHHHHHHHHHHHHTSG
T ss_pred CHHHHHHHHHHHHHHhcCc
Confidence 7889999999999999766
No 4
>d2o4ta1 a.69.4.1 (A:16-105) Uncharacterized protein BH3976 {Bacillus halodurans [TaxId: 86665]}
Probab=8.47 E-value=2.9e+02 Score=20.88 Aligned_cols=85 Identities=14% Similarity=0.212 Sum_probs=50.6
Q ss_pred cchhh-hhhhHhhhhhhhHHH-hcCCCCchhHHHHHHHHHHHHHHHhccCCchhhHhhHhhhhhhcccCchHHHhHHhhh
Q 010967 399 ARVKA-TERFEAIYPTLKEVA-LAGVPGSKAMKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWVSYS 476 (496)
Q Consensus 399 aRvKa-teRfeAiyP~LKevA-LaG~~gskamkqv~qqif~~slk~age~np~LakEa~~i~IWcLtqn~dc~k~We~ly 476 (496)
||+|+ ++-+..+|-=+..-. -.|.---.-+.++-..|+.+-+-++.+|-++..-=+.+..=.|=.=-.+ .|.|-..|
T Consensus 3 aR~k~Lp~dy~~~y~~i~~YL~~~~~~~~~~~~~il~dil~lleea~~~G~~v~ev~G~D~~~f~deli~~-~k~~~dk~ 81 (90)
T d2o4ta1 3 SRVEKLPKDYQIVYKEIQKYLFKVGPVELNEGIGLLSEILGFFEEGAAAGKGVLDVTGTDVAAFCDALIGD-SKTYADLY 81 (90)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHCSCHHHHHHHTTSC-SHHHHHHH
T ss_pred hHHHhCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHHHhh-chhhHHHH
Confidence 67766 555666554443322 2332222247788999999999988777666533333333333221122 58999999
Q ss_pred hhhcccch
Q 010967 477 HQTLYADT 484 (496)
Q Consensus 477 ~eNl~asv 484 (496)
++.|--+|
T Consensus 82 r~~ln~~i 89 (90)
T d2o4ta1 82 QESIQQHV 89 (90)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhc
Confidence 99886554
No 5
>d1lmra_ g.3.6.3 (A:) ADO1 {Assassin bug (Agriosphodrus dohrni) [TaxId: 184613]}
Probab=8.43 E-value=28 Score=23.17 Aligned_cols=11 Identities=36% Similarity=0.918 Sum_probs=9.4
Q ss_pred hcccCchHHHh
Q 010967 461 CLTQSADCYKH 471 (496)
Q Consensus 461 cLtqn~dc~k~ 471 (496)
||.||..|||.
T Consensus 12 clgenkqcc~~ 22 (35)
T d1lmra_ 12 CLGENKQCCKG 22 (35)
T ss_dssp CSSCCCCCCTT
T ss_pred ccccchhhccC
Confidence 88999999875
No 6
>d1n5ua2 a.126.1.1 (A:197-388) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.06 E-value=97 Score=26.06 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=30.4
Q ss_pred hhHHHHHHhhhccccccchhhHHHHHhHHhhhcc
Q 010967 153 TDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFS 186 (496)
Q Consensus 153 sdLaafL~~is~sY~~~pdiQLmRFaDYFgrafs 186 (496)
.-+..||-+++..|+..+.-+|++++.-|...+.
T Consensus 129 ~~~~~flye~srrhP~~~~~~ll~~~~~y~~~l~ 162 (192)
T d1n5ua2 129 VFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLE 162 (192)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 6688999999999999999999999999977543
No 7
>d1vcta1 a.7.12.1 (A:9-107) Hypothetical protein PH0236, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=7.72 E-value=1.3e+02 Score=21.95 Aligned_cols=29 Identities=14% Similarity=0.101 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHHHhccCCchhhHhhH
Q 010967 427 AMKQVSLQILSFAIKFAGESTPDLSNEAA 455 (496)
Q Consensus 427 amkqv~qqif~~slk~age~np~LakEa~ 455 (496)
-|...++..|..++.+..+++++++++..
T Consensus 12 ~M~~~~~~ml~~a~~a~~~~D~~~A~~v~ 40 (99)
T d1vcta1 12 EMKDTVELMVDLAYASLLFGDKEIAEEVL 40 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 48888999999999999999999988663
No 8
>d1eucb1 c.23.4.1 (B:246-393) Succinyl-CoA synthetase, beta-chain, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=7.57 E-value=92 Score=26.04 Aligned_cols=24 Identities=29% Similarity=0.459 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHhcCcccceeeec
Q 010967 348 SRDIILQLVERILSSPKARTILVN 371 (496)
Q Consensus 348 SrDliLQlvE~iLs~pkArtiLvn 371 (496)
+++.+.+.++-||++|+-|.||+|
T Consensus 56 ~~e~v~~al~iil~d~~Vk~IlIN 79 (148)
T d1eucb1 56 KESQVYQAFKLLTADPKVEAILVN 79 (148)
T ss_dssp CHHHHHHHHHHTTSCTTCCEEEEE
T ss_pred CHHHHHHHHHHHHCCCCccEEEEE
Confidence 578899999999999999999999
No 9
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]}
Probab=7.50 E-value=19 Score=31.09 Aligned_cols=42 Identities=19% Similarity=0.413 Sum_probs=28.4
Q ss_pred chHHHHHHHHHHHhcChhHHHhhhhhhhhhccccCCCCchHH
Q 010967 271 SQVAIFVALAMVLRRKPDVLIGVLPALRENAKYQGQDKLPVI 312 (496)
Q Consensus 271 sqVaifV~LAMVLR~kP~vL~~vlptlr~~~kyqg~dkLPv~ 312 (496)
+.+-+.++||.+||+=|+.=..--|..+..+-++|++.|||+
T Consensus 356 A~~e~~~~la~ll~rf~~~~l~~~~~~~~~~~~r~~~~l~v~ 397 (401)
T d1q5da_ 356 ARLEAEIAVGTIFRRFPEMKLKETPVFGYHPAFRNIESLNVI 397 (401)
T ss_dssp HHHHHHHHHHHHHHHCTTCEECSCCEECCCSSBCCEEECEEE
T ss_pred HHHHHHHHHHHHHHhCCCCeECCCCeecCCCcccCcccceEE
Confidence 356788999999998876322222444456667788888864
No 10
>d1n5ua1 a.126.1.1 (A:2-196) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.42 E-value=1.1e+02 Score=25.73 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=29.8
Q ss_pred hhHHHHHHhhhccccccchhhHHHHHhHHhhhcc
Q 010967 153 TDLSAFLIDISGTYEDKQDIQMMRFADYFGRAFS 186 (496)
Q Consensus 153 sdLaafL~~is~sY~~~pdiQLmRFaDYFgrafs 186 (496)
.-+..||-+++..||..++-+|++++.-|...+.
T Consensus 132 ~~~~~fLye~srrhP~~~~~~ll~~a~~y~~~~~ 165 (195)
T d1n5ua1 132 TFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFT 165 (195)
T ss_dssp HHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHH
Confidence 3488999999999999999999999999877543
Done!