BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010968
(496 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225427967|ref|XP_002277572.1| PREDICTED: methyltransferase-like protein 16-like [Vitis vinifera]
Length = 497
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/496 (72%), Positives = 413/496 (83%), Gaps = 3/496 (0%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
MG KKRRR ERP+IHP+NKYSENPPDFALLASLYPSF+PFVF +R GRP IDWTDFNA
Sbjct: 1 MGGKKRRRV--ERPSIHPRNKYSENPPDFALLASLYPSFKPFVFLNRAGRPTIDWTDFNA 58
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSS+IIP TS +G+ V+GF
Sbjct: 59 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDIIPKTSTDGNNVRGF 118
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGANCIYPLLGASLLGWSFVG+D+TDVALEWAEKNVKSNPHISELIEIRKV++ ST
Sbjct: 119 DIGTGANCIYPLLGASLLGWSFVGTDVTDVALEWAEKNVKSNPHISELIEIRKVESDGST 178
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
PS + G+S E D+SG + EP S S + G+ SYHGPPVL+G+++DGE
Sbjct: 179 PSGEGLHIGESFIVEGEKDLSGINAGDTEPLPSCSLDADLGSNKSYHGPPVLLGILKDGE 238
Query: 241 QFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
DFC+CNPPFFE+MEEAGLNPKTSCGGTPEEMVC GGE+AFITRII+DSV LKQ+FRWY
Sbjct: 239 NLDFCMCNPPFFETMEEAGLNPKTSCGGTPEEMVCPGGEKAFITRIIDDSVILKQSFRWY 298
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKK 360
TSMVG+K+NLK L+SKLR VGVTIVKTTEFVQGQTCRWG+AWSFVP ARK+I PHVA+K
Sbjct: 299 TSMVGKKTNLKILVSKLRNVGVTIVKTTEFVQGQTCRWGIAWSFVPSARKLILPHVAKKN 358
Query: 361 NLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVN 420
N SFMLEG+QRQFSA++VLQS+E+FF GASCK NASSFTV++ +SND CN ILK EV
Sbjct: 359 NQSFMLEGLQRQFSAINVLQSVESFFCTIGASCKSNASSFTVDVAISNDHCNAILKTEVQ 418
Query: 421 RVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFS 480
+E ++++E SS S L FR VFQQIPGTLLV+GSL +++P G+F
Sbjct: 419 GYNELNNYQYMQEICDGSS-FPPSFEELCFRILVFQQIPGTLLVRGSLKDRESPGSGVFW 477
Query: 481 SIFQQLEETLRFKFCR 496
SIFQQLEE L+ KFCR
Sbjct: 478 SIFQQLEEVLKNKFCR 493
>gi|255574754|ref|XP_002528285.1| conserved hypothetical protein [Ricinus communis]
gi|223532322|gb|EEF34123.1| conserved hypothetical protein [Ricinus communis]
Length = 473
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/477 (71%), Positives = 396/477 (83%), Gaps = 14/477 (2%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
MGS R +RR+ R TIHP+NKY+++PPDFALLASLYPSFEPF+FYSRDGRPRIDWTDFN+
Sbjct: 1 MGSNNRNKRRK-RATIHPRNKYADSPPDFALLASLYPSFEPFIFYSRDGRPRIDWTDFNS 59
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TRELTR+LLLHDH LNWWIPDGQLCPTVPNRSNYIHW+EDLLSS+IIP T+ NGD VKGF
Sbjct: 60 TRELTRLLLLHDHSLNWWIPDGQLCPTVPNRSNYIHWVEDLLSSDIIPKTNINGDTVKGF 119
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGANCIYPLLGASLLGWSFVGSD+TDVA+EWAE+NVK+NPH+SELIE+RKV N + T
Sbjct: 120 DIGTGANCIYPLLGASLLGWSFVGSDVTDVAVEWAERNVKNNPHVSELIEVRKVTNCQGT 179
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
S+++S +S+ ES MD G + E+ A YHGPPVLVGV+++ E
Sbjct: 180 LSVEDSRNVESISCESKMDADGSVIEKL-----------VDANKKYHGPPVLVGVIKNDE 228
Query: 241 QFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
+F+FC+CNPPFFESMEEAGLNPKTSCGGTPEEMVC GGE+AFI RIIEDSV LK++FRW+
Sbjct: 229 KFEFCMCNPPFFESMEEAGLNPKTSCGGTPEEMVCPGGEKAFIARIIEDSVILKESFRWF 288
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKK 360
TSMVGRK+NLKFL S+LR+VGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII PHV +K
Sbjct: 289 TSMVGRKTNLKFLTSRLREVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIILPHVDDKS 348
Query: 361 NLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVN 420
+ FMLEG+QRQFSA+DVLQS+E+FF +GASC+LN++SF V+IT S DQC+ ILKNE
Sbjct: 349 IIPFMLEGLQRQFSAIDVLQSVESFFRTTGASCRLNSTSFAVDITASMDQCDAILKNEAK 408
Query: 421 RVDEGPTSKHLEET--SSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPL 475
D LE T S+SS+ + L FR VFQQIPGTLLV+GSL HKD+P+
Sbjct: 409 ESDGTANCDPLEGTSKSNSSTLQHPPLNKLCFRILVFQQIPGTLLVKGSLQHKDSPV 465
>gi|224080596|ref|XP_002306173.1| predicted protein [Populus trichocarpa]
gi|222849137|gb|EEE86684.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/466 (72%), Positives = 382/466 (81%), Gaps = 24/466 (5%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
KK +R+R ERPTIHPKNKYS+NPPDF++LASLYPS +PFVFYSRDGRPRIDWTD+N+TRE
Sbjct: 1 KKNKRKRPERPTIHPKNKYSDNPPDFSVLASLYPSLKPFVFYSRDGRPRIDWTDYNSTRE 60
Query: 64 LTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSS+IIP + N D V+GFDIG
Sbjct: 61 LTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDIIPKNNNNDDIVRGFDIG 120
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGANCIYPLLGASLLGW+FVGSD+TDVA+EWAEKNVK N HISELIEIRKV + +S SI
Sbjct: 121 TGANCIYPLLGASLLGWTFVGSDVTDVAVEWAEKNVKCNQHISELIEIRKVTDCQSAISI 180
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
++S G+SV E+ MD G + Y GPP+L+GVVRDGE+FD
Sbjct: 181 EDSNCGESVNCENKMD---------------------GNATKYSGPPLLLGVVRDGEKFD 219
Query: 244 FCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303
FC+CNPPFFE+MEEAGLNPKTSCGGTPEEMVC GGE+AFIT IIEDSV LK++FRW+TSM
Sbjct: 220 FCMCNPPFFETMEEAGLNPKTSCGGTPEEMVCPGGEKAFITCIIEDSVVLKESFRWFTSM 279
Query: 304 VGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLS 363
VGRK NLKFL SKLR+VGVTIVKTTEFVQGQTCRWGLAWSFVPP RKIISP V +K +LS
Sbjct: 280 VGRKVNLKFLTSKLREVGVTIVKTTEFVQGQTCRWGLAWSFVPPVRKIISPLV-QKNSLS 338
Query: 364 FMLE-GVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRV 422
F LE G+QRQFSA VLQSIE+FF GASCKLNASSF V+IT SNDQC IL++E
Sbjct: 339 FTLEQGLQRQFSAFHVLQSIESFFCLGGASCKLNASSFVVDITASNDQCKAILRDEAKHP 398
Query: 423 DEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSL 468
+ T L E S SSS L+ S +LSF +VFQQIPGTLLV+ SL
Sbjct: 399 NGAATCNPL-EASHSSSYLHPPSNNLSFCISVFQQIPGTLLVKASL 443
>gi|449454349|ref|XP_004144918.1| PREDICTED: methyltransferase-like protein 16 homolog [Cucumis
sativus]
Length = 485
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/494 (66%), Positives = 388/494 (78%), Gaps = 13/494 (2%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
+++R+ E TIHP+NKY+ENPPDFALLASLYPSF+PFV S RPRIDWTDFNATREL
Sbjct: 3 RKKRKTREAATIHPRNKYAENPPDFALLASLYPSFQPFV--SLHPRPRIDWTDFNATREL 60
Query: 65 TRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGT 124
TRVLLLHDH L+WWIPDGQLCPTVPNRSNYIHW+EDLLSS+++ + + +V+GFDIGT
Sbjct: 61 TRVLLLHDHALHWWIPDGQLCPTVPNRSNYIHWLEDLLSSDVVAKKNSDCGRVRGFDIGT 120
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYPLLGASLLGWSFVG+D+TDVALEWAE+NV SNPHISELIEIRKVD++ S +
Sbjct: 121 GANCIYPLLGASLLGWSFVGTDVTDVALEWAERNVTSNPHISELIEIRKVDDTSDDLSTE 180
Query: 185 ESLTGKSVQDESNMDMSGHMD-EEAEPSSSSSFNLPA-GAQSSYHGPPVLVGVVRDGEQF 242
SV +S + MD E P S + A ++ YHGPP+L+GVV+DGE+F
Sbjct: 181 ---LHDSVAVDSECKIFNEMDGREIGPPLPSFLSKEAIHLETQYHGPPILLGVVKDGERF 237
Query: 243 DFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
DFC+CNPPFFESM+EAGLNPKTSCGGTP+EMVC GGERAFI+R+IEDS+ LKQTFRWYTS
Sbjct: 238 DFCMCNPPFFESMDEAGLNPKTSCGGTPQEMVCPGGERAFISRMIEDSIVLKQTFRWYTS 297
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNL 362
M+G+KSNL FLISKL KVGVT+VKTTEFVQGQTCRWGLAWSF+ ARKIISPHV K L
Sbjct: 298 MIGKKSNLSFLISKLWKVGVTVVKTTEFVQGQTCRWGLAWSFMSTARKIISPHVTNKSIL 357
Query: 363 SFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRV 422
SFMLEG+ Q SA+ +LQS+E F S GASCKLNASSFTV+IT S D C IL+N
Sbjct: 358 SFMLEGLLSQVSAMSILQSVERFLSTGGASCKLNASSFTVDITASEDHCQAILENGACEE 417
Query: 423 DEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFSSI 482
+ + LE++ + ST L FR +VFQQIPGTLLV+GSL K NP GLFS I
Sbjct: 418 VKDASCVALEKSETQ------LSTDLCFRVSVFQQIPGTLLVKGSLHQKSNPSAGLFSLI 471
Query: 483 FQQLEETLRFKFCR 496
F +LEE L+ +FC+
Sbjct: 472 FHRLEEFLKAEFCK 485
>gi|449510434|ref|XP_004163663.1| PREDICTED: methyltransferase-like protein 16 homolog [Cucumis
sativus]
Length = 485
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/494 (67%), Positives = 387/494 (78%), Gaps = 13/494 (2%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
+++R+ E TIHP+NKY+ENPPDFALLASLYPSF+PFV S RPRIDWTDFNATREL
Sbjct: 3 RKKRKTREAATIHPRNKYAENPPDFALLASLYPSFQPFV--SLHPRPRIDWTDFNATREL 60
Query: 65 TRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGT 124
TRVLLLHDH L+WWIPDGQLCPTVPNRSNYIHW+EDLLSS+I+ + + +V+GFDIGT
Sbjct: 61 TRVLLLHDHALHWWIPDGQLCPTVPNRSNYIHWLEDLLSSDIVAKKNSDCGRVRGFDIGT 120
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYPLLGASLLGWSFVG+D+TDVALEWAE+NV SNPHISELIEIRKVD++ S +
Sbjct: 121 GANCIYPLLGASLLGWSFVGTDVTDVALEWAERNVTSNPHISELIEIRKVDDTSDDLSTE 180
Query: 185 ESLTGKSVQDESNMDMSGHMD-EEAEPSSSSSFNLPA-GAQSSYHGPPVLVGVVRDGEQF 242
SV +S + MD E P S + A ++ YHGPP+L+GVV+DGE F
Sbjct: 181 ---LHDSVAVDSECKIFNEMDGREIGPPLPSFLSKEAIHLETRYHGPPILLGVVKDGEGF 237
Query: 243 DFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
DFC+CNPPFFESM+EAGLNPKTSCGGTP+EMVC GGERAFI+R+IEDS+ LKQTFRWYTS
Sbjct: 238 DFCMCNPPFFESMDEAGLNPKTSCGGTPQEMVCPGGERAFISRMIEDSIVLKQTFRWYTS 297
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNL 362
M+G+KSNL FLISKL KVGVTIVKTTEFVQGQTCRWGLAWSF+ ARKIISPHV K L
Sbjct: 298 MIGKKSNLSFLISKLWKVGVTIVKTTEFVQGQTCRWGLAWSFMSTARKIISPHVTNKSIL 357
Query: 363 SFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRV 422
SFMLEG+ Q SA+ +LQS+E F S GASCKLNASSFTV+IT S D C IL+N
Sbjct: 358 SFMLEGLLSQVSAMSILQSVERFLSTGGASCKLNASSFTVDITASEDHCQAILENGACEE 417
Query: 423 DEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFSSI 482
+ + LE++ + ST L FR +VFQQIPGTLLV+GSL K NP GLFS I
Sbjct: 418 VKDASCVALEKSETQ------LSTDLCFRVSVFQQIPGTLLVKGSLHQKSNPSAGLFSLI 471
Query: 483 FQQLEETLRFKFCR 496
F +LEE L+ +FC+
Sbjct: 472 FHRLEEFLKAEFCK 485
>gi|42569208|ref|NP_179703.2| ribosomal RNA large subunit methyltransferase F [Arabidopsis
thaliana]
gi|53850469|gb|AAU95411.1| At2g21070 [Arabidopsis thaliana]
gi|55733759|gb|AAV59276.1| At2g21070 [Arabidopsis thaliana]
gi|330252024|gb|AEC07118.1| ribosomal RNA large subunit methyltransferase F [Arabidopsis
thaliana]
Length = 483
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/502 (64%), Positives = 384/502 (76%), Gaps = 25/502 (4%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M S K+R R E T P++KYS+NPPDFA LASLYPSF+PFVF+S R RIDWTD+NA
Sbjct: 1 MRSGKKRARSEPGSTKQPRSKYSDNPPDFASLASLYPSFKPFVFFS-GSRARIDWTDYNA 59
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TRELTRVLLLHDHG+NWWIPDGQLCPTVPNRSNYIHWI DLLSS II + +G KVKGF
Sbjct: 60 TRELTRVLLLHDHGVNWWIPDGQLCPTVPNRSNYIHWINDLLSSGIIQSLGGDGSKVKGF 119
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGANCIYPLLGASL GWSFVGSD T VALEWAEKNV+SNPH S+LIEIR +S+
Sbjct: 120 DIGTGANCIYPLLGASLFGWSFVGSDFTVVALEWAEKNVQSNPHFSDLIEIR---DSKVP 176
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG------PPVLVG 234
P SV + N + + EEAE + A +S YH P VL+G
Sbjct: 177 PQCS------SVPEVENTEREKTIQEEAE--------ISATVKSDYHDNKSFIEPAVLLG 222
Query: 235 VVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
VV++ E FDFC+ NPPFFE+ EEAGLNPKTSCGGTPEEMVC+GGE+AF++RII+DS L+
Sbjct: 223 VVKENETFDFCMSNPPFFETFEEAGLNPKTSCGGTPEEMVCNGGEQAFVSRIIKDSAVLR 282
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISP 354
Q FRWYTSM+G+K+NLK LISKL +VGVTIVKTTEFVQGQT RWGLAWSF+P ARKII+P
Sbjct: 283 QRFRWYTSMLGKKANLKLLISKLWEVGVTIVKTTEFVQGQTSRWGLAWSFMPIARKIIAP 342
Query: 355 HVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTI 414
V +K LSFMLE ++RQ+SA+DVLQS+E FF + GASCKLN+S+F+V+I SNDQCNTI
Sbjct: 343 PVVKKSVLSFMLECIKRQYSAVDVLQSVEEFFKSCGASCKLNSSTFSVDIVASNDQCNTI 402
Query: 415 LKNEVNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNP 474
KN++ VD S E+ S S L +LSFR VFQQ+PGTLL++GSL KD+P
Sbjct: 403 SKNDIADVD-SVRSHGYEKQSLDGSSLQVPEYNLSFRILVFQQMPGTLLIKGSLQQKDSP 461
Query: 475 LPGLFSSIFQQLEETLRFKFCR 496
L GLFS +F LEE+L+ KFCR
Sbjct: 462 LSGLFSRVFGSLEESLKSKFCR 483
>gi|334184347|ref|NP_001189567.1| ribosomal RNA large subunit methyltransferase F [Arabidopsis
thaliana]
gi|330252026|gb|AEC07120.1| ribosomal RNA large subunit methyltransferase F [Arabidopsis
thaliana]
Length = 513
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/502 (65%), Positives = 384/502 (76%), Gaps = 25/502 (4%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M S K+R R E T P++KYS+NPPDFA LASLYPSF+PFVF+S R RIDWTD+NA
Sbjct: 1 MRSGKKRARSEPGSTKQPRSKYSDNPPDFASLASLYPSFKPFVFFS-GSRARIDWTDYNA 59
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TRELTRVLLLHDHG+NWWIPDGQLCPTVPNRSNYIHWI DLLSS II + +G KVKGF
Sbjct: 60 TRELTRVLLLHDHGVNWWIPDGQLCPTVPNRSNYIHWINDLLSSGIIQSLGGDGSKVKGF 119
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGANCIYPLLGASL GWSFVGSD T VALEWAEKNV+SNPH S+LIEIR +S+
Sbjct: 120 DIGTGANCIYPLLGASLFGWSFVGSDFTVVALEWAEKNVQSNPHFSDLIEIR---DSKVP 176
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG------PPVLVG 234
P SV + N + + EEAE S A +S YH P VL+G
Sbjct: 177 PQCS------SVPEVENTEREKTIQEEAEIS--------ATVKSDYHDNKSFIEPAVLLG 222
Query: 235 VVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
VV++ E FDFC+ NPPFFE+ EEAGLNPKTSCGGTPEEMVC+GGE+AF++RII+DS L+
Sbjct: 223 VVKENETFDFCMSNPPFFETFEEAGLNPKTSCGGTPEEMVCNGGEQAFVSRIIKDSAVLR 282
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISP 354
Q FRWYTSM+G+K+NLK LISKL +VGVTIVKTTEFVQGQT RWGLAWSF+P ARKII+P
Sbjct: 283 QRFRWYTSMLGKKANLKLLISKLWEVGVTIVKTTEFVQGQTSRWGLAWSFMPIARKIIAP 342
Query: 355 HVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTI 414
V +K LSFMLE ++RQ+SA+DVLQS+E FF + GASCKLN+S+F+V+I SNDQCNTI
Sbjct: 343 PVVKKSVLSFMLECIKRQYSAVDVLQSVEEFFKSCGASCKLNSSTFSVDIVASNDQCNTI 402
Query: 415 LKNEVNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNP 474
KN++ VD S E+ S S L +LSFR VFQQ+PGTLL++GSL KD+P
Sbjct: 403 SKNDIADVD-SVRSHGYEKQSLDGSSLQVPEYNLSFRILVFQQMPGTLLIKGSLQQKDSP 461
Query: 475 LPGLFSSIFQQLEETLRFKFCR 496
L GLFS +F LEE+L+ KFCR
Sbjct: 462 LSGLFSRVFGSLEESLKSKFCR 483
>gi|297821301|ref|XP_002878533.1| hypothetical protein ARALYDRAFT_480956 [Arabidopsis lyrata subsp.
lyrata]
gi|297324372|gb|EFH54792.1| hypothetical protein ARALYDRAFT_480956 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/497 (65%), Positives = 386/497 (77%), Gaps = 21/497 (4%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M + K+R R E T P+NKYS+NPPDFA LASLYPSF+PFVF+S GR RIDWTD+NA
Sbjct: 1 MRNGKKRGRSEPGSTKKPRNKYSDNPPDFASLASLYPSFKPFVFFS-GGRARIDWTDYNA 59
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TRELTR+LLLHDHG+NWWIPDGQLCPTVPNRSNYIHWI DLLSS +I + G +VKGF
Sbjct: 60 TRELTRILLLHDHGVNWWIPDGQLCPTVPNRSNYIHWINDLLSSEVIQSL---GGEVKGF 116
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGANCIYPLLGASL GWSFVGSD T VALEWAEKNVKSNPHIS+LIEIR +
Sbjct: 117 DIGTGANCIYPLLGASLFGWSFVGSDFTAVALEWAEKNVKSNPHISDLIEIRDSKVLPQS 176
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSS-SSFNLPAGAQSSYHGPPVLVGVVRDG 239
S+ ES +++ H EEAE S++ S NL Q+ Y P VL+GVV++
Sbjct: 177 SSVPES------------ELTIH--EEAEISATVQSINLVDDNQT-YTEPAVLLGVVKEN 221
Query: 240 EQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
E FDFC+ NPPFFE+ EE+GLNPKTSCGGTPEEMVC+GGE+AF++ IIEDS L+Q FRW
Sbjct: 222 ETFDFCMSNPPFFETFEESGLNPKTSCGGTPEEMVCNGGEQAFVSCIIEDSTVLRQRFRW 281
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEK 359
YTSM+G+K+NLK LISKL +VGVTIVKTTEFVQGQT RWGLAWSF+P ARKII+P V +K
Sbjct: 282 YTSMLGKKANLKLLISKLWQVGVTIVKTTEFVQGQTSRWGLAWSFMPTARKIIAPPVVKK 341
Query: 360 KNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEV 419
LSFMLEG++RQ+SA+DVLQS+E FF + GASCKLN+S+F+V+I S+DQCN+I KN +
Sbjct: 342 SVLSFMLEGIKRQYSAVDVLQSVEEFFKSCGASCKLNSSTFSVDIVASDDQCNSISKNGI 401
Query: 420 NRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLF 479
VD S ++ S S L +LSFR VFQQ+PGTLL++GSL KD+PL GLF
Sbjct: 402 TDVDS-VRSYGYDKQSLDGSSLQVPEDNLSFRILVFQQMPGTLLIKGSLQQKDSPLSGLF 460
Query: 480 SSIFQQLEETLRFKFCR 496
S +F LEE+L+ KFCR
Sbjct: 461 SVVFGCLEESLKSKFCR 477
>gi|297744639|emb|CBI37901.3| unnamed protein product [Vitis vinifera]
Length = 432
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 322/496 (64%), Positives = 368/496 (74%), Gaps = 68/496 (13%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
MG KKRRR ERP+IHP+NKYSENPPDFALLASLYPSF+PFVF +R GRP IDWTDFNA
Sbjct: 1 MGGKKRRR--VERPSIHPRNKYSENPPDFALLASLYPSFKPFVFLNRAGRPTIDWTDFNA 58
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSS+IIP TS +G+ V+GF
Sbjct: 59 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDIIPKTSTDGNNVRGF 118
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGANCIYPLLGASLLGWSFVG+D+TDVALEWAEKNVKSNPHISELIEIRKV+
Sbjct: 119 DIGTGANCIYPLLGASLLGWSFVGTDVTDVALEWAEKNVKSNPHISELIEIRKVE----- 173
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
+P S S + G+ SYHGPPVL+G+++D
Sbjct: 174 ----------------------------KPLPSCSLDADLGSNKSYHGPPVLLGILKD-- 203
Query: 241 QFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
EEMVC GGE+AFITRII+DSV LKQ+FRWY
Sbjct: 204 ------------------------------EEMVCPGGEKAFITRIIDDSVILKQSFRWY 233
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKK 360
TSMVG+K+NLK L+SKLR VGVTIVKTTEFVQGQTCRWG+AWSFVP ARK+I PHVA+K
Sbjct: 234 TSMVGKKTNLKILVSKLRNVGVTIVKTTEFVQGQTCRWGIAWSFVPSARKLILPHVAKKN 293
Query: 361 NLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVN 420
N SFMLEG+QRQFSA++VLQS+E+FF GASCK NASSFTV++ +SND CN ILK EV
Sbjct: 294 NQSFMLEGLQRQFSAINVLQSVESFFCTIGASCKSNASSFTVDVAISNDHCNAILKTEVQ 353
Query: 421 RVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFS 480
+E ++++E SS S L FR VFQQIPGTLLV+GSL +++P G+F
Sbjct: 354 GYNELNNYQYMQEICDGSS-FPPSFEELCFRILVFQQIPGTLLVRGSLKDRESPGSGVFW 412
Query: 481 SIFQQLEETLRFKFCR 496
SIFQQLEE L+ KFCR
Sbjct: 413 SIFQQLEEVLKNKFCR 428
>gi|356524986|ref|XP_003531108.1| PREDICTED: methyltransferase-like protein 16-like [Glycine max]
Length = 490
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 309/497 (62%), Positives = 374/497 (75%), Gaps = 14/497 (2%)
Query: 2 GSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFV-FYSRDGRPRIDWTDFNA 60
GSKKR+R+R E ENPPDFALLASLYP F PFV F RP IDWTDFNA
Sbjct: 3 GSKKRKRKRNEEQRGGTVYSERENPPDFALLASLYPEFHPFVQFLHSHSRPTIDWTDFNA 62
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TR+LTRVLL H H LNWWIPDG LCPTVPNR NYIHW++ LLSS+IIP T + K +GF
Sbjct: 63 TRQLTRVLLHHRHALNWWIPDGNLCPTVPNRCNYIHWLQHLLSSDIIPNTISSDGKFRGF 122
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGA+CIYPLLGASL GWSFVGSD+T+VA+EWAE+NV SNPHIS+LIEIRKV ++ S
Sbjct: 123 DIGTGASCIYPLLGASLHGWSFVGSDVTNVAIEWAERNVNSNPHISQLIEIRKVQDNASD 182
Query: 181 P--SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
P ++ES+ G N+ + G D E P +L A +YHGPP+LVGVVRD
Sbjct: 183 PCVEVEESVNG------DNIALCGSTDVEVAPLP---LDLHACENRNYHGPPILVGVVRD 233
Query: 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
E+FDFC+CNPPFFES+EEAGLNPKTSCGGT +EMVC GGERAFITRIIEDS LK FR
Sbjct: 234 DEKFDFCMCNPPFFESLEEAGLNPKTSCGGTSQEMVCPGGERAFITRIIEDSTQLKDQFR 293
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAE 358
W+TSMVG+KSNLK+L SKL +VGV +VKTTEFVQG+TCRWGLAWSF+ P +K + +
Sbjct: 294 WFTSMVGKKSNLKYLTSKLWEVGVAVVKTTEFVQGRTCRWGLAWSFLTPLQK-TPVSLPD 352
Query: 359 KKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNE 418
KKN SFMLEG+QRQ++A++VL+++ ++FS+ G SC LN SSFTV++ + D C+ IL+N
Sbjct: 353 KKNTSFMLEGLQRQYAAINVLEAVNSYFSSHGLSCTLNTSSFTVDVAAAKDDCDLILRNG 412
Query: 419 VNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGL 478
+ +++ + E SS SS LN SS L F +VFQQIPGTLLV+GSL +++ L G
Sbjct: 413 LPIINKSIDCQPTREASSGSS-LNLSSERLCFCISVFQQIPGTLLVKGSLQDRNSTLSGA 471
Query: 479 FSSIFQQLEETLRFKFC 495
FS IFQ+LEE LR KFC
Sbjct: 472 FSMIFQKLEEALRDKFC 488
>gi|115443873|ref|NP_001045716.1| Os02g0121200 [Oryza sativa Japonica Group]
gi|41052631|dbj|BAD08140.1| SAM-dependent methyltransferase-like protein [Oryza sativa Japonica
Group]
gi|41052744|dbj|BAD07600.1| SAM-dependent methyltransferase-like protein [Oryza sativa Japonica
Group]
gi|113535247|dbj|BAF07630.1| Os02g0121200 [Oryza sativa Japonica Group]
gi|215687216|dbj|BAG91781.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768408|dbj|BAH00637.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 466
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/483 (58%), Positives = 361/483 (74%), Gaps = 35/483 (7%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E P IHP+N+Y+ PDFA LASLYPSF PFV SR GR ID+TDF ATRELTRVLLLH
Sbjct: 14 EAPAIHPRNRYAAAAPDFASLASLYPSFAPFVSVSRGGRASIDFTDFAATRELTRVLLLH 73
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
DHG+NWWIPDGQLCPTVPNRSNYIHWIEDLLSS++IP S + V+GFDIGTGANCIYP
Sbjct: 74 DHGVNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDLIPPISSSNKTVRGFDIGTGANCIYP 133
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGASLLGWSFVGSD+TDVALEWA+KNV+SNP ++ L+EIR N S S E++ G++
Sbjct: 134 LLGASLLGWSFVGSDVTDVALEWAKKNVESNPQLAALVEIRNA-NKMSCSSESEAVDGEA 192
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
++ ++ + G + + P +L+GVV+D E FDFC+CNPPF
Sbjct: 193 ARENTSKPVDGVLRSK---------------------PSILLGVVKDSESFDFCMCNPPF 231
Query: 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
FES+EEAGLNPKTSCGGT EEMVC GGE+AFITRIIEDSV+LK +FRW+TSMVGRK+NLK
Sbjct: 232 FESIEEAGLNPKTSCGGTAEEMVCPGGEQAFITRIIEDSVSLKNSFRWFTSMVGRKANLK 291
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFMLEGVQR 371
L+SK+R+ GV++VKTTEFVQGQT RWGLAWSF+ P + +I K N SFML+G++R
Sbjct: 292 ILVSKVREAGVSVVKTTEFVQGQTARWGLAWSFIAPRKMVIRSSTPGKANYSFMLQGLRR 351
Query: 372 QFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEGPTSKHL 431
++ A VL+S E+FF AS SCK ++S F++++T+S++Q + ++ + EG ++K
Sbjct: 352 EYGAFQVLKSAESFFHASNLSCKTDSSLFSIDVTLSDEQAQAAMLHDESGSVEGNSTK-- 409
Query: 432 EETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFSSIFQQLEETLR 491
L++ T SFR +VF+Q+PGTLLV+GSLL+K L G+FSS F QLE+TL+
Sbjct: 410 ---------LHSGVTGTSFRISVFEQMPGTLLVRGSLLNK--ALSGIFSSTFSQLEDTLK 458
Query: 492 FKF 494
+F
Sbjct: 459 MEF 461
>gi|356512217|ref|XP_003524817.1| PREDICTED: methyltransferase-like protein 16-like [Glycine max]
Length = 488
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/498 (60%), Positives = 369/498 (74%), Gaps = 20/498 (4%)
Query: 2 GSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSR-DGRPRIDWTDFNA 60
GSKKR+R +R YSEN PDFALLASLYP F PF+ +S RP IDWTDFNA
Sbjct: 3 GSKKRKRNEGQRG----GTVYSENLPDFALLASLYPEFHPFLQFSHPHSRPTIDWTDFNA 58
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TR+LTRVLL H H L WWIPDG LCPTVPNR NYIHW++ LLSSNII T + K +GF
Sbjct: 59 TRQLTRVLLHHRHALTWWIPDGHLCPTVPNRCNYIHWLQHLLSSNIIRNTVSSDGKFRGF 118
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGA+CIYPLLGASL GWSFVGSD+TDVA+EWAE+NV SNPHIS+LIEIRKV ++ S
Sbjct: 119 DIGTGASCIYPLLGASLHGWSFVGSDVTDVAIEWAERNVNSNPHISQLIEIRKVQDNASA 178
Query: 181 P--SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
P ++ES+TG + + D E P +L + +YHGPP+LVGVVR
Sbjct: 179 PCVEVEESVTGDRIT------LCRSTDVEVAP---LPLDLHSCKNRNYHGPPILVGVVRG 229
Query: 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
E FDFC+CNPPFFES+EEAGLNPKTSCGGT EMVC GGERAFITRIIEDS L + FR
Sbjct: 230 DENFDFCMCNPPFFESLEEAGLNPKTSCGGTSWEMVCPGGERAFITRIIEDSTQLTEQFR 289
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKI-ISPHVA 357
W+TSM+G+KSNLK+L SKL +VGV IVKTTEFVQG+T RWGLAWSF+ P +K IS +
Sbjct: 290 WFTSMIGKKSNLKYLTSKLWEVGVAIVKTTEFVQGRTSRWGLAWSFLTPIQKTPIS--LP 347
Query: 358 EKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKN 417
KKN SF LEG+QRQ A+++L+++ ++FS+ G C LN SSFTV++ S D C++IL+N
Sbjct: 348 NKKNTSFTLEGLQRQHGAINLLEAVNSYFSSHGLFCTLNTSSFTVDVAASKDDCDSILRN 407
Query: 418 EVNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPG 477
E++ +++ + ++TS+ SS LN SS L FR +VFQQIPGTLLV+GSL ++ + G
Sbjct: 408 ELHIINKSINCQPTQKTSNGSS-LNLSSERLCFRISVFQQIPGTLLVKGSLQDRNCAVSG 466
Query: 478 LFSSIFQQLEETLRFKFC 495
FS IFQ+LEE LR FC
Sbjct: 467 AFSVIFQKLEEALRNNFC 484
>gi|222622070|gb|EEE56202.1| hypothetical protein OsJ_05165 [Oryza sativa Japonica Group]
Length = 453
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/467 (58%), Positives = 348/467 (74%), Gaps = 36/467 (7%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E P IHP+N+Y+ PDFA LASLYPSF PFV SR GR ID+TDF ATRELTRVLLLH
Sbjct: 14 EAPAIHPRNRYAAAAPDFASLASLYPSFAPFVSVSRGGRASIDFTDFAATRELTRVLLLH 73
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
DHG+NWWIPDGQLCPTVPNRSNYIHWIEDLLSS++IP S + V+GFDIGTGANCIYP
Sbjct: 74 DHGVNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDLIPPISSSNKTVRGFDIGTGANCIYP 133
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGASLLGWSFVGSD+TDVALEWA+KNV+SNP ++ L+EIR N S S E++ G++
Sbjct: 134 LLGASLLGWSFVGSDVTDVALEWAKKNVESNPQLAALVEIRNA-NKMSCSSESEAVDGEA 192
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
++ ++ + G + + P +L+GVV+D E FDFC+CNPPF
Sbjct: 193 ARENTSKPVDGVLRSK---------------------PSILLGVVKDSESFDFCMCNPPF 231
Query: 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
FES+EEAGLNPKTSCGGT EEMVC GGE+AFITRIIEDSV+LK +FRW+TSMVGRK+NLK
Sbjct: 232 FESIEEAGLNPKTSCGGTAEEMVCPGGEQAFITRIIEDSVSLKNSFRWFTSMVGRKANLK 291
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFMLEGVQR 371
L+SK+R+ GV++VKTTEFVQGQT RWGLAWSF+ P + +I K N SFML+G++R
Sbjct: 292 ILVSKVREAGVSVVKTTEFVQGQTARWGLAWSFIAPRKMVIRSSTPGKANYSFMLQGLRR 351
Query: 372 QFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEGPTSKHL 431
++ A VL+S E+FF AS SCK ++S F++++T+S++Q + ++ + EG ++K
Sbjct: 352 EYGAFQVLKSAESFFHASNLSCKTDSSLFSIDVTLSDEQAQAAMLHDESGSVEGNSTK-- 409
Query: 432 EETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHK---DNPL 475
L++ T SFR +VF+Q+PGTLLV+GSLL+K D PL
Sbjct: 410 ---------LHSGVTGTSFRISVFEQMPGTLLVRGSLLNKALSDTPL 447
>gi|218189945|gb|EEC72372.1| hypothetical protein OsI_05634 [Oryza sativa Indica Group]
Length = 453
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/467 (58%), Positives = 347/467 (74%), Gaps = 36/467 (7%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E P IHP+N+Y+ PDFA LASLYPSF PFV SR GR ID+TDF ATRELTRVLLLH
Sbjct: 14 EAPAIHPRNRYAAAAPDFASLASLYPSFAPFVSVSRGGRASIDFTDFAATRELTRVLLLH 73
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
DHG+NWWIPDGQLCPTVPNRSNYIHWIEDLLSS++IP S + V+GFDIGTGANCIYP
Sbjct: 74 DHGVNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDLIPPISSSNKTVRGFDIGTGANCIYP 133
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGASLLGWSFVGSD+TDVALEWA+KNV+SNP ++ L+EIR N S S E++ G++
Sbjct: 134 LLGASLLGWSFVGSDVTDVALEWAKKNVESNPQLAALVEIRNA-NKMSCSSESEAVDGEA 192
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
++ ++ + G + + P +L+GVV+D E FDFC+CNPPF
Sbjct: 193 ARENTSKPVDGVLRSK---------------------PSILLGVVKDSESFDFCMCNPPF 231
Query: 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
FES+EEAGLNPKTSCGGT EEMVC GGE+AFITRIIEDSV+LK +FRW+TSMVGRK+NLK
Sbjct: 232 FESIEEAGLNPKTSCGGTAEEMVCPGGEQAFITRIIEDSVSLKNSFRWFTSMVGRKANLK 291
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFMLEGVQR 371
L+SK+ + GV++VKTTEFVQGQT RWGLAWSF+ P + +I K N SFML+G++R
Sbjct: 292 ILVSKVHEAGVSVVKTTEFVQGQTARWGLAWSFIAPRKMVIRSSTPGKANYSFMLQGLRR 351
Query: 372 QFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEGPTSKHL 431
++ A VL+S E+FF AS SCK ++S F++++T+S++Q + ++ + EG ++K
Sbjct: 352 EYGAFQVLKSAESFFHASNLSCKTDSSLFSIDVTLSDEQAQAAMLHDESGSVEGNSTK-- 409
Query: 432 EETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHK---DNPL 475
L++ T SFR +VF+Q+PGTLLV+GSLL+K D PL
Sbjct: 410 ---------LHSGVTGTSFRISVFEQMPGTLLVRGSLLNKALSDTPL 447
>gi|357145159|ref|XP_003573546.1| PREDICTED: methyltransferase-like protein 16-like [Brachypodium
distachyon]
Length = 470
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 289/499 (57%), Positives = 366/499 (73%), Gaps = 39/499 (7%)
Query: 2 GSKKRRRRREERP-TIHPKNKYSENPPDFALLASLYPSFEPFVFY-SRDGRPRIDWTDFN 59
G K+RR E P T+HP+N+Y+ PPDFA LA+LYPSF PFV + GR +D+TDF+
Sbjct: 4 GKKRRRENDSEAPRTMHPRNRYAAAPPDFAALAALYPSFAPFVSVPAGGGRASVDFTDFD 63
Query: 60 ATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG 119
ATRELTRVLLLHDHG++WWIPDGQLCPTVPNRSNYIHWIEDLLSSN+IP S + ++V+G
Sbjct: 64 ATRELTRVLLLHDHGISWWIPDGQLCPTVPNRSNYIHWIEDLLSSNLIPPISSSSERVRG 123
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
FDIGTGANCIYPLLGASLLGW+FVGSD+TDVALEWA+KNV+SNPH++ LIEIR N+
Sbjct: 124 FDIGTGANCIYPLLGASLLGWNFVGSDVTDVALEWAKKNVESNPHLAGLIEIR---NANE 180
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEA--EPSSSSSFNLPAGAQSSYHGPPVLVGVVR 237
P +S T +DEE E +S + N+ PP+LVGVV+
Sbjct: 181 APCCSKSET---------------VDEEPIRENTSEAVDNVVRSI------PPILVGVVK 219
Query: 238 DGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
D E FDFC+CNPPFFESM EAGLNPKTSCGGT +EM C GGE+AFIT IIEDSV+ K +F
Sbjct: 220 DNESFDFCMCNPPFFESMGEAGLNPKTSCGGTAQEMACPGGEQAFITHIIEDSVSFKNSF 279
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVA 357
RW+TSMVGRK+NLK L SK+R+VG ++VKTTEFVQGQT RWGLAWSF+ P + +I +
Sbjct: 280 RWFTSMVGRKTNLKLLASKVREVGASVVKTTEFVQGQTARWGLAWSFIAPRKMVIRASIP 339
Query: 358 EKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKN 417
K + SFML+G + A VL+S ETFF AS SCK ++ SF++++T+ ++Q +
Sbjct: 340 GKVHHSFMLQGHRHICGAFKVLKSAETFFCASNLSCKTDSVSFSIDVTIPDEQ----TQA 395
Query: 418 EVNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPG 477
V D+ P + +E+ S+ +++ T SFR +VF+QIPGTLL++GSLL+K L G
Sbjct: 396 AVLHGDDFPGA--VEDNSTKP---HSAITGTSFRISVFEQIPGTLLIRGSLLNK--ALSG 448
Query: 478 LFSSIFQQLEETLRFKFCR 496
FSS+F QLE+TL+ +FCR
Sbjct: 449 TFSSLFSQLEDTLKEEFCR 467
>gi|326531988|dbj|BAK01370.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 469
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/478 (57%), Positives = 348/478 (72%), Gaps = 33/478 (6%)
Query: 14 PTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDH 73
P +HP+N+Y+ + PDFA LA+LYPSF PFV S GR +D+TDF ATRELTRVLLLHDH
Sbjct: 17 PVMHPRNRYAASAPDFAALAALYPSFAPFVAVSGGGRASVDFTDFAATRELTRVLLLHDH 76
Query: 74 GLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
G+NWWIPDGQLCPTVPNRSNYIHWIEDLLSS++IP S + + V+GFDIGTGANCIYPLL
Sbjct: 77 GVNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDLIPPISNSSETVRGFDIGTGANCIYPLL 136
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
GASLLGWSFVGSD+TDVALEWA++NV+SNPH++ LIEIR N S E++ ++V+
Sbjct: 137 GASLLGWSFVGSDVTDVALEWAKRNVESNPHLAGLIEIRNA-NEAPCSSKPETVAEEAVR 195
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+ + + G + A P+ VGVV+D E FDFC+CNPPFFE
Sbjct: 196 ENISEPVDGVVRSIA---------------------PIFVGVVKDSESFDFCMCNPPFFE 234
Query: 254 SMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
SMEEAGLNPKTSC GT EEM C GGE+AFIT IIEDSV+ K +FRW+TSMVGRK+NLK L
Sbjct: 235 SMEEAGLNPKTSCAGTAEEMACPGGEQAFITHIIEDSVSFKNSFRWFTSMVGRKANLKLL 294
Query: 314 ISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFMLEGVQRQF 373
+SK+R+ G ++VKTTEFVQGQT RWGLAWSF+ P + I K + SFML+G++R
Sbjct: 295 VSKVREAGASVVKTTEFVQGQTARWGLAWSFIAPRKNAIRSSTPGKVHHSFMLQGLRRGN 354
Query: 374 SALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEGPTSKHLEE 433
A VL+S E FF AS SCK ++ SF++++T+S++Q + R+D +E+
Sbjct: 355 GAFQVLKSAEAFFCASNLSCKTDSVSFSIDVTLSDEQ------TQAARLDGDNLPGSVED 408
Query: 434 TSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFSSIFQQLEETLR 491
+ L+++ T SFR +VF+Q+PGTLL++GSLL+K L G F+S+F QLEETL+
Sbjct: 409 DPTK---LHSTVTGASFRISVFEQMPGTLLIKGSLLNKS--LSGTFTSLFSQLEETLK 461
>gi|413926632|gb|AFW66564.1| hypothetical protein ZEAMMB73_104704 [Zea mays]
Length = 468
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/484 (58%), Positives = 359/484 (74%), Gaps = 37/484 (7%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E P++HP+N+Y+ PDFA LA LYPSF PFV S GR +D+TDF++TRELTRVLLLH
Sbjct: 14 ETPSMHPRNRYAAAAPDFAALAELYPSFRPFVSVSGSGRASVDFTDFSSTRELTRVLLLH 73
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
DHG+NWWIPDGQLCPTVPNRSNYIHWIEDLLSS++IP S + ++VKGFDIGTGANCIYP
Sbjct: 74 DHGVNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDLIPPISSSSERVKGFDIGTGANCIYP 133
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGASLLGW+FVGSD+T+VALEWA+KNV+SNPH++ELIEIR N+ + PS E++
Sbjct: 134 LLGASLLGWTFVGSDVTNVALEWAKKNVESNPHLAELIEIR---NANAAPSESETV---- 186
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
V++ ++ + ++ A P P +LVGVV++ E FDFC+CNPPF
Sbjct: 187 VREAASEKILEPAEDVAMPK-----------------PHILVGVVKESESFDFCMCNPPF 229
Query: 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
FES EEAGLNPKTSCGGT EEMVC GGE AFIT+IIEDSV+LK +FRW+TSM+GRK+NLK
Sbjct: 230 FESTEEAGLNPKTSCGGTAEEMVCPGGELAFITQIIEDSVSLKNSFRWFTSMIGRKANLK 289
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA-RKIISPHVA-EKKNLSFMLEGV 369
LISK+R+ G ++VKTTEFVQG T RWGLAWSF+ P RKI+ A KK+ SFML+G+
Sbjct: 290 LLISKVREAGASVVKTTEFVQGHTARWGLAWSFIAPKPRKIVLGSSAPAKKHHSFMLQGL 349
Query: 370 QRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEGPTSK 429
+R+ A +L+S E FF AS SCK ++S F+V++T+S++Q E + +
Sbjct: 350 RREHGAFQILKSTEAFFLASNLSCKTDSSVFSVDVTLSDEQI------EAAILHGDDYAG 403
Query: 430 HLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFSSIFQQLEET 489
LE++S+ C+ +SFR VF+QIPGTLL++GSLL+K L G FSS+F +LE+
Sbjct: 404 SLEDSSAKLQCV---VKGISFRITVFEQIPGTLLIKGSLLNK--ALSGTFSSLFSRLEDA 458
Query: 490 LRFK 493
LR K
Sbjct: 459 LRAK 462
>gi|226498032|ref|NP_001143191.1| uncharacterized protein LOC100275693 [Zea mays]
gi|195615588|gb|ACG29624.1| hypothetical protein [Zea mays]
Length = 468
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/482 (58%), Positives = 357/482 (74%), Gaps = 37/482 (7%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E P++HP+N+Y+ PDFA LA LYPSF PFV S GR +D+TDF++TRELTRVLLLH
Sbjct: 14 ETPSMHPRNRYAAAAPDFAALAELYPSFRPFVSVSGSGRASVDFTDFSSTRELTRVLLLH 73
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
DHG+NWWIPDGQLCPTVPNRSNYIHWIEDLLSS++IP S + +VKGFDIGTGANCIYP
Sbjct: 74 DHGVNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDLIPPISSSSARVKGFDIGTGANCIYP 133
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGASLLGW+FVGSD+T+VALEWA+KNV+SNPH++ELIEIR N+ + PS E++
Sbjct: 134 LLGASLLGWTFVGSDVTNVALEWAKKNVESNPHLAELIEIR---NANAAPSESETV---- 186
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
V++ ++ + ++ A P P +LVGVV++ E FDFC+CNPPF
Sbjct: 187 VREAASEKILEPAEDVAMPK-----------------PHILVGVVKESESFDFCMCNPPF 229
Query: 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
FES EEAGLNPKTSCGGT EEMVC GGE AFIT+IIEDSV+LK +FRW+TSM+GRK+NLK
Sbjct: 230 FESTEEAGLNPKTSCGGTAEEMVCPGGELAFITQIIEDSVSLKNSFRWFTSMIGRKANLK 289
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA-RKIISPHVA-EKKNLSFMLEGV 369
LISK+R+ G ++VKTTEFVQG T RWGLAWSF+ P RKI+ A KK+ SFML+G+
Sbjct: 290 LLISKVREAGASVVKTTEFVQGHTARWGLAWSFIAPKPRKIVLGSSAPAKKHHSFMLQGL 349
Query: 370 QRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEGPTSK 429
+R+ A +L+S E FF AS SCK ++S F+V++T+S++Q E + +
Sbjct: 350 RREHGAFQILKSTEAFFLASNLSCKTDSSVFSVDVTLSDEQI------EAAILHGDDYAG 403
Query: 430 HLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFSSIFQQLEET 489
LE++S+ C+ +SFR VF+QIPGTLL++GSLL+K L G FSS+F +LE+
Sbjct: 404 SLEDSSAKLQCV---VKGISFRITVFEQIPGTLLIKGSLLNK--ALSGTFSSLFSRLEDA 458
Query: 490 LR 491
LR
Sbjct: 459 LR 460
>gi|242063852|ref|XP_002453215.1| hypothetical protein SORBIDRAFT_04g001730 [Sorghum bicolor]
gi|241933046|gb|EES06191.1| hypothetical protein SORBIDRAFT_04g001730 [Sorghum bicolor]
Length = 468
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/486 (57%), Positives = 353/486 (72%), Gaps = 41/486 (8%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
+ P++HP+N+Y+ PDFA LA LYPSF PFV S GR +D+TDF+ATRELTRVLLLH
Sbjct: 14 DAPSMHPRNRYAAAAPDFAALAELYPSFRPFVSVSDRGRASVDFTDFSATRELTRVLLLH 73
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
DHG+NWWIPDGQLCPTVPNRSNYIHWIEDLLSS++IP S + ++VKGFDIGTGANCIYP
Sbjct: 74 DHGVNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDLIPPISSSSERVKGFDIGTGANCIYP 133
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD--NSESTPSIQESLTG 189
LLGASLLGW+FVGSD+T+VALEWA+KNV+SNP ++ELIEIR + +SES ++E+
Sbjct: 134 LLGASLLGWTFVGSDVTNVALEWAQKNVESNPRLAELIEIRNANAPSSESESVVREAARE 193
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
K ++ ++ M P +LVGVV++ E FDFC+CNP
Sbjct: 194 KILEPAEDVAMPK--------------------------PHILVGVVKESESFDFCMCNP 227
Query: 250 PFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN 309
PFFES+EEAGLNPKTSCGGT EEMVC GGE AF+T+IIEDSV+LK +FRW+TSM+GRK+N
Sbjct: 228 PFFESIEEAGLNPKTSCGGTAEEMVCPGGELAFVTQIIEDSVSLKNSFRWFTSMIGRKAN 287
Query: 310 LKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP-ARKIISPHVAEKKN-LSFMLE 367
LK LISK+R+ G ++VKTTEFVQGQT RWGLAWSF+ P RK++ A KN SFML+
Sbjct: 288 LKLLISKVREAGASVVKTTEFVQGQTARWGLAWSFIAPRPRKMVLSSTAPAKNHHSFMLQ 347
Query: 368 GVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEGPT 427
G++R+ A VL+S E FF AS SCK + SF V++T+S++Q E +
Sbjct: 348 GLRREHGAFQVLKSTEAFFLASNLSCKTDPLSFAVDVTLSDEQI------EAAILHGDDY 401
Query: 428 SKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHKDNPLPGLFSSIFQQLE 487
+ LE+ SS+ L + +SFR VF+QIPGTLL++GS L+K L G FSS+F QLE
Sbjct: 402 AGSLED---SSAKLQSVVKGISFRITVFEQIPGTLLIKGSSLNK--ALSGTFSSLFSQLE 456
Query: 488 ETLRFK 493
+ LR +
Sbjct: 457 DALRME 462
>gi|79322590|ref|NP_001031382.1| ribosomal RNA large subunit methyltransferase F [Arabidopsis
thaliana]
gi|330252025|gb|AEC07119.1| ribosomal RNA large subunit methyltransferase F [Arabidopsis
thaliana]
Length = 380
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 308/394 (78%), Gaps = 24/394 (6%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M S K+R R E T P++KYS+NPPDFA LASLYPSF+PFVF+S R RIDWTD+NA
Sbjct: 1 MRSGKKRARSEPGSTKQPRSKYSDNPPDFASLASLYPSFKPFVFFS-GSRARIDWTDYNA 59
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TRELTRVLLLHDHG+NWWIPDGQLCPTVPNRSNYIHWI DLLSS II + +G KVKGF
Sbjct: 60 TRELTRVLLLHDHGVNWWIPDGQLCPTVPNRSNYIHWINDLLSSGIIQSLGGDGSKVKGF 119
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGANCIYPLLGASL GWSFVGSD T VALEWAEKNV+SNPH S+LIEIR +S+
Sbjct: 120 DIGTGANCIYPLLGASLFGWSFVGSDFTVVALEWAEKNVQSNPHFSDLIEIR---DSKVP 176
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG------PPVLVG 234
P SV + N + + EEAE S A +S YH P VL+G
Sbjct: 177 PQCS------SVPEVENTEREKTIQEEAEIS--------ATVKSDYHDNKSFIEPAVLLG 222
Query: 235 VVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
VV++ E FDFC+ NPPFFE+ EEAGLNPKTSCGGTPEEMVC+GGE+AF++RII+DS L+
Sbjct: 223 VVKENETFDFCMSNPPFFETFEEAGLNPKTSCGGTPEEMVCNGGEQAFVSRIIKDSAVLR 282
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISP 354
Q FRWYTSM+G+K+NLK LISKL +VGVTIVKTTEFVQGQT RWGLAWSF+P ARKII+P
Sbjct: 283 QRFRWYTSMLGKKANLKLLISKLWEVGVTIVKTTEFVQGQTSRWGLAWSFMPIARKIIAP 342
Query: 355 HVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSA 388
V +K LSFMLE ++RQ+SA+DVLQS+E FF +
Sbjct: 343 PVVKKSVLSFMLECIKRQYSAVDVLQSVEEFFKS 376
>gi|52354261|gb|AAU44451.1| hypothetical protein AT2G21070 [Arabidopsis thaliana]
Length = 378
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/393 (67%), Positives = 307/393 (78%), Gaps = 24/393 (6%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M S K+R R E T P++KYS+NPPDFA LASLYPSF+PFVF+S R RIDWTD+NA
Sbjct: 1 MRSGKKRARSEPGSTKQPRSKYSDNPPDFASLASLYPSFKPFVFFS-GSRARIDWTDYNA 59
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TRELTRVLLLHDHG+NWWIPDGQLCPTVPNRSNYIHWI DLLSS II + +G KVKGF
Sbjct: 60 TRELTRVLLLHDHGVNWWIPDGQLCPTVPNRSNYIHWINDLLSSGIIQSLGGDGSKVKGF 119
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGANCIYPLLGASL GWSFVGSD T VALEWAEKNV+SNPH S LIEIR +S+
Sbjct: 120 DIGTGANCIYPLLGASLFGWSFVGSDFTVVALEWAEKNVQSNPHFSXLIEIR---DSKVP 176
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG------PPVLVG 234
P SV + N + + EEAE S A +S YH P VL+G
Sbjct: 177 PQCS------SVPEVENTEREKTIQEEAEIS--------ATVKSDYHDNKSFIEPAVLLG 222
Query: 235 VVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
VV++ E FDFC+ NPPFFE+ EEAGLNPKTSCGGTPEEMVC+GGE+AF++RII+DS L+
Sbjct: 223 VVKENETFDFCMSNPPFFETFEEAGLNPKTSCGGTPEEMVCNGGEQAFVSRIIKDSAVLR 282
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISP 354
Q FRWYTSM+G+K+NLK LISKL +VGVTIVKTTEFVQGQT RWGLAWSF+P ARKII+P
Sbjct: 283 QRFRWYTSMLGKKANLKLLISKLWEVGVTIVKTTEFVQGQTSRWGLAWSFMPIARKIIAP 342
Query: 355 HVAEKKNLSFMLEGVQRQFSALDVLQSIETFFS 387
V +K LSFMLE ++RQ+SA+DVLQS+E FF+
Sbjct: 343 PVVKKSVLSFMLECIKRQYSAVDVLQSVEEFFN 375
>gi|168062828|ref|XP_001783379.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665129|gb|EDQ51824.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 381
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/393 (53%), Positives = 262/393 (66%), Gaps = 18/393 (4%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER T+HP+NKY+E PPDF LLA LYP F +V Y + + RIDWTDFNATRELTR LL H
Sbjct: 2 ERKTMHPRNKYAEKPPDFTLLAGLYPQFSEYVTYGANQKARIDWTDFNATRELTRTLLYH 61
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
D+G+ WWIPDGQLCP V NR+NYIHWIEDLL+ + P S V G DIGTGANCIYP
Sbjct: 62 DYGITWWIPDGQLCPAVTNRANYIHWIEDLLALSPAPWLSSGDHLVTGLDIGTGANCIYP 121
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG SL GW FVG+D+T VALEWA N SNPH+S LIEIR + S P+I + +
Sbjct: 122 LLGTSLHGWRFVGTDITPVALEWARWNADSNPHVSALIEIRSL---PSEPTISSTPCNEP 178
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
E + G+ E P S ++ VLVGVV + E+FDFC+CNPPF
Sbjct: 179 EYPEPPTNAPGNAPSETGPESCAN---------------VLVGVVSEEERFDFCMCNPPF 223
Query: 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
F S+EEAG+NP+TSCGGT EMVC GGE AF+ RIIEDS LK W+T+MVGRK+ LK
Sbjct: 224 FSSLEEAGVNPRTSCGGTEAEMVCPGGEEAFVARIIEDSAQLKHVIHWFTTMVGRKATLK 283
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFMLEGVQR 371
L ++L +G V+TTEFVQG+T RWGLAWSF P + + K N SFMLEG+ R
Sbjct: 284 GLTARLWALGAAAVRTTEFVQGRTSRWGLAWSFASPPKAVQKNSTVSKSNHSFMLEGLGR 343
Query: 372 QFSALDVLQSIETFFSASGASCKLNASSFTVNI 404
S++DVL I + G+ C ++ S F++++
Sbjct: 344 GCSSVDVLHVIALQLQSLGSLCTVSESDFSISV 376
>gi|4803936|gb|AAD29809.1| unknown protein [Arabidopsis thaliana]
Length = 374
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/411 (56%), Positives = 268/411 (65%), Gaps = 85/411 (20%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M S K+R R E T P++KYS+NPPDFA LASLYPSF+PFVF+S R RIDWTD+NA
Sbjct: 1 MRSGKKRARSEPGSTKQPRSKYSDNPPDFASLASLYPSFKPFVFFS-GSRARIDWTDYNA 59
Query: 61 TRELTRVLLLHDHGLNW---------------------------WIPDGQLCPTVPNRSN 93
TRELTRVLLLHDHG+NW WIPDGQLCPTVPNRSN
Sbjct: 60 TRELTRVLLLHDHGVNWYDFNCTKELAFLLSRTVSYLPKSYIYRWIPDGQLCPTVPNRSN 119
Query: 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153
YIHWI DLLSS II + +G KVKGFDI D T VALE
Sbjct: 120 YIHWINDLLSSGIIQSLGGDGSKVKGFDI-----------------------DFTVVALE 156
Query: 154 WAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSS 213
WAEKNV+SNPH S+LIEIR +S+ P SV + N + + EEAE S
Sbjct: 157 WAEKNVQSNPHFSDLIEIR---DSKVPPQCS------SVPEVENTEREKTIQEEAEIS-- 205
Query: 214 SSFNLPAGAQSSYHG------PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCG 267
A +S YH P VL+GVV++ E FDFC+ NPPFFE+ EEAGLNPKTSCG
Sbjct: 206 ------ATVKSDYHDNKSFIEPAVLLGVVKENETFDFCMSNPPFFETFEEAGLNPKTSCG 259
Query: 268 GTPEEMVCSGGERAFITRIIEDSVALKQTF-----------RWYTSMVGRKSNLKFLISK 316
GTPEEMVC+GGE+AF++RII+DS L+Q F RWYTSM+G+K+NLK LISK
Sbjct: 260 GTPEEMVCNGGEQAFVSRIIKDSAVLRQRFRTYRFVNMFNIRWYTSMLGKKANLKLLISK 319
Query: 317 LRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFMLE 367
L +VGVTIVKTTEFVQGQT RWGLAWSF+P ARKII+P V +K LSFMLE
Sbjct: 320 LWEVGVTIVKTTEFVQGQTSRWGLAWSFMPIARKIIAPPVVKKSVLSFMLE 370
>gi|255642329|gb|ACU21429.1| unknown [Glycine max]
Length = 318
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/308 (66%), Positives = 234/308 (75%), Gaps = 12/308 (3%)
Query: 2 GSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFV-FYSRDGRPRIDWTDFNA 60
GSKKR+R+R E ENPPDFALLASLYP F PFV F RP IDWTDFNA
Sbjct: 3 GSKKRKRKRNEEQRGGTVYSERENPPDFALLASLYPEFHPFVQFLHSHSRPTIDWTDFNA 62
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
TR+LTRVLL H H LNWWIPDG LCPTVPNR NYIHW++ LLSS+IIP T + K +GF
Sbjct: 63 TRQLTRVLLHHRHALNWWIPDGNLCPTVPNRCNYIHWLQHLLSSDIIPNTISSDGKFRGF 122
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGA+CIYPLLGASL GWSFVGSD+T+VA+EWAE+NV SNPHIS+LIEIRKV ++ S
Sbjct: 123 DIGTGASCIYPLLGASLHGWSFVGSDVTNVAIEWAERNVNSNPHISQLIEIRKVQDNASD 182
Query: 181 P--SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
P ++ES+ G N+ + G D E P +L A +YHGPP+LVGVVRD
Sbjct: 183 PCVEVEESVNG------DNIALCGSTDVEVAP---LPLDLHACENRNYHGPPILVGVVRD 233
Query: 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
E+FDFC+CNPPFFES+EEAGLNPKTSCGGT +EMVC GGERAFITRIIEDS LK FR
Sbjct: 234 DEKFDFCMCNPPFFESLEEAGLNPKTSCGGTSQEMVCPGGERAFITRIIEDSTQLKDQFR 293
Query: 299 WYTSMVGR 306
W+TSMVG+
Sbjct: 294 WFTSMVGK 301
>gi|302795588|ref|XP_002979557.1| hypothetical protein SELMODRAFT_110877 [Selaginella moellendorffii]
gi|300152805|gb|EFJ19446.1| hypothetical protein SELMODRAFT_110877 [Selaginella moellendorffii]
Length = 427
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/504 (44%), Positives = 283/504 (56%), Gaps = 96/504 (19%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYS-RDGRPRIDWTDFNATRE 63
KR+R + HP+N+Y+E PDFA LA+ Y SF +V + GR IDW D+ ATRE
Sbjct: 2 KRKR------STHPRNRYAEGSPDFAALAARYASFARYVRINPSTGRGSIDWRDYAATRE 55
Query: 64 LTRVLLLHDHG-LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
LTRVLL D+G L WWIPDGQLCP V NR+NYIHWIEDLL P + G V G DI
Sbjct: 56 LTRVLLDCDYGILGWWIPDGQLCPAVTNRANYIHWIEDLLQGFPAPGKNAEGG-VLGLDI 114
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
GTGA+ IYPLLGASL GW FV +D+T VALEW +N+ +NPH+ ELIE+R +
Sbjct: 115 GTGASAIYPLLGASLRGWKFVATDVTSVALEWGRRNIAANPHLMELIEVRSAAKN----- 169
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
G DEE +LVGVV+D E F
Sbjct: 170 -------------------GGEDEE-------------------ENHRLLVGVVKDEEIF 191
Query: 243 DFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
DF +CNPPFFESMEEAG+NP+T+CGGTPEEMVC+GGE F++R+I +SV L WYTS
Sbjct: 192 DFSMCNPPFFESMEEAGMNPRTACGGTPEEMVCAGGEAGFVSRLIRESVELGTKIHWYTS 251
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP-------ARKIISPH 355
MVG+KS+LK L +++R G T+VKTTEFVQG+T RWGLAWSF R
Sbjct: 252 MVGKKSSLKALKAEIRGCGATMVKTTEFVQGKTSRWGLAWSFSSAGAVKSGSGRSCFGTG 311
Query: 356 VAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSN-----DQ 410
+ + SF+LEG+ R+ SAL+VL + + A G +CK++A+SF + T + DQ
Sbjct: 312 TSSSGSFSFVLEGIDRKCSALEVLGDLGSHLEAGGVACKIDAASFAITGTPGDQREGFDQ 371
Query: 411 CNTILKNEVNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLH 470
N+ K+E F+ +FQQ PG LLV+ +
Sbjct: 372 RNSDGKSE-------------------------------FKATLFQQSPGCLLVK-IWIS 399
Query: 471 KDNPLPGLFSSIFQQLEETLRFKF 494
K L S + E TL+ K
Sbjct: 400 KAGRSSSLLVSALESSESTLKEKL 423
>gi|302791898|ref|XP_002977715.1| hypothetical protein SELMODRAFT_443646 [Selaginella moellendorffii]
gi|300154418|gb|EFJ21053.1| hypothetical protein SELMODRAFT_443646 [Selaginella moellendorffii]
Length = 427
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/504 (43%), Positives = 284/504 (56%), Gaps = 96/504 (19%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYS-RDGRPRIDWTDFNATRE 63
KR+R + HP+N+Y+E PDFA LA+ Y SF +V + GR IDW D+ ATRE
Sbjct: 2 KRKR------STHPRNRYAEGSPDFAALAARYASFARYVRINPSTGRGSIDWRDYAATRE 55
Query: 64 LTRVLLLHDHG-LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
LTRVLL D+G L WWIPDGQLCP V NR+NYIHWIEDLL P + G V G DI
Sbjct: 56 LTRVLLDCDYGILGWWIPDGQLCPAVTNRANYIHWIEDLLQEFPAPGKNVEGG-VLGLDI 114
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
GTGA+ IYPLLGASL GW FV +D+T VALEW +N+ +NPH+ ELIE+R +
Sbjct: 115 GTGASTIYPLLGASLRGWKFVATDVTSVALEWGRRNIAANPHLMELIELRSAAKN----- 169
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
G Q+E++ +LVGVV+D E F
Sbjct: 170 ------GGEDQEENHR--------------------------------LLVGVVKDEEIF 191
Query: 243 DFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
DF +CNPPFFESMEEAG+NP+T+CGGTPEEMVC+GGE F++R+I +S+ L WYTS
Sbjct: 192 DFSMCNPPFFESMEEAGMNPRTACGGTPEEMVCTGGEAGFVSRLIHESMELGTKIHWYTS 251
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP-------ARKIISPH 355
MVG+KS+L+ L +++R G T+VKTTEFVQG+T RWGLAWSF R
Sbjct: 252 MVGKKSSLRALKAEIRGCGATMVKTTEFVQGKTSRWGLAWSFSSAGAVKSGSGRSCFGTG 311
Query: 356 VAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSN-----DQ 410
+ + SF+LEG+ R+ SAL+VL + A G +CK++A+SF + T + DQ
Sbjct: 312 TSSSGSFSFVLEGIDRKCSALEVLGDLGRHLEARGVACKIDAASFAITGTPGDQREGFDQ 371
Query: 411 CNTILKNEVNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLH 470
N+ K+E F+ +FQQ PG LLV+ +
Sbjct: 372 RNSDGKSE-------------------------------FKATLFQQSPGCLLVK-IWIS 399
Query: 471 KDNPLPGLFSSIFQQLEETLRFKF 494
K L S + E TL+ K
Sbjct: 400 KAGRSSSLLVSALESSESTLKEKL 423
>gi|223945479|gb|ACN26823.1| unknown [Zea mays]
Length = 265
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/267 (57%), Positives = 200/267 (74%), Gaps = 13/267 (4%)
Query: 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIE 288
P +LVGVV++ E FDFC+CNPPFFES EEAGLNPKTSCGGT EEMVC GGE AFIT+IIE
Sbjct: 4 PHILVGVVKESESFDFCMCNPPFFESTEEAGLNPKTSCGGTAEEMVCPGGELAFITQIIE 63
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
DSV+LK +FRW+TSM+GRK+NLK LISK+R+ G ++VKTTEFVQG T RWGLAWSF+ P
Sbjct: 64 DSVSLKNSFRWFTSMIGRKANLKLLISKVREAGASVVKTTEFVQGHTARWGLAWSFIAPK 123
Query: 349 -RKIISPHVA-EKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITV 406
RKI+ A KK+ SFML+G++R+ A +L+S E FF AS SCK ++S F+V++T+
Sbjct: 124 PRKIVLGSSAPAKKHHSFMLQGLRREHGAFQILKSTEAFFLASNLSCKTDSSVFSVDVTL 183
Query: 407 SNDQCNTILKNEVNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQG 466
S++Q ++ + D+ S LE++S+ C+ +SFR VF+QIPGTLL++G
Sbjct: 184 SDEQ----IEAAILHGDDYAGS--LEDSSAKLQCV---VKGISFRITVFEQIPGTLLIKG 234
Query: 467 SLLHKDNPLPGLFSSIFQQLEETLRFK 493
SLL+K L G FSS+F +LE+ LR K
Sbjct: 235 SLLNK--ALSGTFSSLFSRLEDALRAK 259
>gi|384249690|gb|EIE23171.1| hypothetical protein COCSUDRAFT_53530 [Coccomyxa subellipsoidea
C-169]
Length = 413
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/322 (43%), Positives = 184/322 (57%), Gaps = 51/322 (15%)
Query: 24 ENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQ 83
E PDFA LA YP P V GR ID+T+F A R+LTR LL HGL+WW+PDG
Sbjct: 121 EEEPDFAQLAGRYPELSPHVKVGPSGRGSIDFTNFEAARQLTRALLHSQHGLHWWVPDGH 180
Query: 84 LCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFV 143
L P V NR+NYIHW+ DLL T + +V+ DIG GAN IYPLLG+++ WSFV
Sbjct: 181 LIPPVTNRANYIHWLHDLL------TLCPDSREVRVLDIGCGANLIYPLLGSAMHNWSFV 234
Query: 144 GSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGH 203
+D+TDVA++WA N+++N + LIE+R V ++ Q + TG
Sbjct: 235 AADITDVAVKWARANLRANTQLEALIEVRDVRPKDA----QHTPTG-------------- 276
Query: 204 MDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPK 263
+L+ V++GE+F F +CNPPFF SM+EAGLNP
Sbjct: 277 ---------------------------ILLPAVQEGERFTFTMCNPPFFSSMDEAGLNPA 309
Query: 264 TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323
T+ GT +EM GGE AF+ ++I DS L+ WYT+MVG+K+ L+ L V
Sbjct: 310 TAFSGTAQEMTHPGGELAFVMQMIRDSSQLQDHVAWYTTMVGKKATLRRAREALHAAAVP 369
Query: 324 IVKTTEFVQGQTCRWGLAWSFV 345
V+TTEFVQG+ RWGLAWSF
Sbjct: 370 AVRTTEFVQGRISRWGLAWSFA 391
>gi|159463918|ref|XP_001690189.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284177|gb|EDP09927.1| predicted protein [Chlamydomonas reinhardtii]
Length = 333
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 190/350 (54%), Gaps = 28/350 (8%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N+Y + PDFA LA Y P+V GR +D T + ATR LT LL D GL
Sbjct: 1 MHPANRYYRSEPDFAALAERYEELRPYVTVDPSGRAHLDTTSWAATRALTACLLRDDFGL 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDK-----VKGFDIGTGANCIY 130
WW+P+GQL P V NR+NY+HW+ DLL+ + P + G ++G DIG GAN IY
Sbjct: 61 AWWLPEGQLVPPVTNRANYLHWVNDLLALSA-PEETHGGAAGELLPLRGLDIGCGANFIY 119
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
LLGA L GWS G D+T A+ K + NP +S L+E+R D S P +Q G+
Sbjct: 120 CLLGAVLYGWSMSGVDVTATAVRCCRKLIADNPQLSGLLELR--DLSHLHPELQVGPWGE 177
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG------PPVLVGVVRDGEQFDF 244
P+ + ++ G +S H P V + D E F F
Sbjct: 178 G--------------GSTNPTHAHQASICTGVKSVIHSVDISVVPRVALSFADDEETFAF 223
Query: 245 CICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
+CNPPFFESM EA NP T+ GGT EMVC GGE AF+ +++ +S L+ W+T+MV
Sbjct: 224 TMCNPPFFESMAEAARNPNTAFGGTAAEMVCPGGELAFVLQMVAESEELQDRVHWFTTMV 283
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISP 354
G+K LK + +L +T ++TTE QG+T RW +AWS+ K + P
Sbjct: 284 GKKDTLKAVKKELHSRHITQLRTTELAQGKTSRWAVAWSWQVDPNKAMQP 333
>gi|301111404|ref|XP_002904781.1| putative methyltransferase METT10D [Phytophthora infestans T30-4]
gi|262095111|gb|EEY53163.1| putative methyltransferase METT10D [Phytophthora infestans T30-4]
Length = 469
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 238/474 (50%), Gaps = 86/474 (18%)
Query: 8 RRREERPT------IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR--IDWTDFN 59
R RPT IH +N+Y +NPPDF L YP F+ ++ D + R + W D
Sbjct: 2 RGEHRRPTPHLGAFIHDRNRYKDNPPDFYALGQQYPEFKQYLRNVDDDKCRACLAWDDPF 61
Query: 60 ATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDL---LSSNIIPTTSRNGDK 116
A RELT+ LLLHD GL+W IP +LCP +PNR NY+HWIEDL L+ + T +N +
Sbjct: 62 AARELTKTLLLHDFGLHWDIPINRLCPPLPNRLNYLHWIEDLLIQLTRKGLQQTDQNLTE 121
Query: 117 --VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174
V G D+GTGANCIY LLGA++ W F+ +++ + + A+KNV N + LI +++
Sbjct: 122 TVVSGIDVGTGANCIYALLGATMNKWKFIATEIDSDSYQCAKKNVARN-QLEPLISVKRT 180
Query: 175 DNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234
++ L + ++DE LP
Sbjct: 181 HTNK--------LLLEPLKDE----------------------LPE-------------- 196
Query: 235 VVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
+FDF +CNPPFF++M EA NP +SC G+ EMV GGE AFI +I +S L+
Sbjct: 197 -----RKFDFVMCNPPFFDNMNEADTNPDSSCMGSTNEMVFPGGEVAFIGSMITESELLR 251
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-----PPAR 349
W+TSMVG+KS+L+ L++ LR V +TTEF+QG+T RWG+AW+F P+
Sbjct: 252 DRIVWFTSMVGKKSSLRKLLALLRGTQVKSTRTTEFLQGRTKRWGIAWTFSSDVIDDPSA 311
Query: 350 KIIS--PHVAEKKNLSFML----EGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVN 403
K++ ++ L F + E S DVLQ I F G +L S T+
Sbjct: 312 KVLGKRKEAHRRQELRFQVPMNREEANGCASIHDVLQRIREFI---GTKEELQLSMDTMK 368
Query: 404 ITVSNDQCNTILKNEVNRVDEGPT--SKHLEETSSSSSCLNASSTSLSFRTAVF 455
DQ K + + DEG LE+ S S+ ++S + R +F
Sbjct: 369 --QQEDQ-----KEDEDETDEGQDWLMCRLEQHKSISTISDSSEVRCAGRVEIF 415
>gi|302853298|ref|XP_002958165.1| hypothetical protein VOLCADRAFT_107982 [Volvox carteri f.
nagariensis]
gi|300256526|gb|EFJ40790.1| hypothetical protein VOLCADRAFT_107982 [Volvox carteri f.
nagariensis]
Length = 1486
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 196/402 (48%), Gaps = 81/402 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N Y PDFA LA Y P+V GR +D + + ATR LT LL HD G+
Sbjct: 152 MHPANLYHRQEPDFAALAEKYKELRPYVSTDAAGRAHLDTSSWAATRALTACLLRHDFGV 211
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNG-----------------DKVK 118
WW+P+GQL P VPNR+NYIHWI DLL + P + ++
Sbjct: 212 RWWLPEGQLVPPVPNRANYIHWINDLLHLSAPPQPPQPPLSGCSGGGGGDGSDGACAVLR 271
Query: 119 GFDIGTGANCIYPLLGASLLGWSFVGSDMT--------DVALEWAEKNVKSNPHISELIE 170
G DIG GAN IY LLGA L GW VG D+T VA+ + ++ NP ++ L+E
Sbjct: 272 GLDIGCGANFIYCLLGAVLYGWKMVGVDVTQQIPVHPVQVAVRCCRQLIEDNPQVAALLE 331
Query: 171 IRKV--------------------------------------DNSESTPSIQES------ 186
IR + D + +Q+
Sbjct: 332 IRDLSYLHPDLQAPDAAALAGPVGPAGGGRRRKRGGSAAGGPDGAAHAAELQQQDYREDG 391
Query: 187 ---LTGKSVQDESNMDMSGHMDEEAE-PSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
G + + MSG MD+EA P ++S P G Q +L D E F
Sbjct: 392 GTGGDGTEAAEGGAVAMSG-MDQEAGLPGDAAS---PTGKQQGI----LLPAFADDSETF 443
Query: 243 DFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F +CNPPFFESM+EA NP T+ GGT EMVC GGE AF+ +++ +S L+ W+++
Sbjct: 444 AFTMCNPPFFESMQEAAQNPNTAFGGTAAEMVCPGGELAFVLQMLVESEELRDRVHWFST 503
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
MVG+KS LK L +L VT ++TTE QG+T RW +AWS+
Sbjct: 504 MVGKKSTLKALRRELHCRHVTALRTTELAQGKTSRWAVAWSW 545
>gi|348542385|ref|XP_003458665.1| PREDICTED: methyltransferase-like protein 16-like [Oreochromis
niloticus]
Length = 474
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 211/406 (51%), Gaps = 85/406 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDFA LAS YP F+ V S G+P +++ + A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFAYLASKYPDFQQHVHTSLTGKPIVNFKEPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L IP +L PTVP R NYIHW+EDL+ P +G DIGTGA+CIYPLLG
Sbjct: 66 LTIEIPLERLIPTVPLRLNYIHWVEDLIDGQKQPR--------RGIDIGTGASCIYPLLG 117
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A++ GW F+ +++ D+ ++A KNV+ N ++S+L+++ KV Q++L ++++
Sbjct: 118 ATMNGWYFLATEVDDICFDYATKNVEQN-NLSDLVKVVKVP--------QKTLLMDALKE 168
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
E+ M +DFC+CNPPFF +
Sbjct: 169 ETEM------------------------------------------VYDFCMCNPPFFAN 186
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 187 QLEAKGVNSRNSRRPPPSSVNTGGVTEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 246
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARKIISPHVAE 358
+K +L L +LRK GV V TEF QG+T RW LAWSF PP++K
Sbjct: 247 KKCSLAPLKEELRKQGVPKVTHTEFCQGRTMRWALAWSFYDDVVVPSPPSKKCKLEKA-- 304
Query: 359 KKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNI 404
+K LSF + L+ ++ SA G +C+ S TV +
Sbjct: 305 RKPLSFTMPEAG--------LKELQAKASALGCTCRSPVDSLTVLV 342
>gi|348685653|gb|EGZ25468.1| hypothetical protein PHYSODRAFT_486208 [Phytophthora sojae]
Length = 474
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 198/373 (53%), Gaps = 76/373 (20%)
Query: 6 RRRRREERPTI----HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR--IDWTDFN 59
R RR P + H +N+Y +NPPDF L YP F ++ + + R + W D
Sbjct: 2 RGERRRPTPHLGALAHDRNRYKDNPPDFYALGQQYPEFRQYLRNVDEVKCRASLAWDDPF 61
Query: 60 ATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSS----NIIPTTSRNG- 114
A RELT+ LLLHD GL W IP +LCP +PNR NY+HW+EDLLS + + +N
Sbjct: 62 AARELTKTLLLHDFGLEWEIPINRLCPPLPNRLNYLHWVEDLLSQADCKSFLGHQRQNAG 121
Query: 115 -DK---------VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH 164
DK V G D+GTGANCIY LLGA++ W F+ +++ + E A++NV N H
Sbjct: 122 VDKQGFETEEAVVSGIDVGTGANCIYALLGATMNKWKFIATEIDSESYECAKENVARN-H 180
Query: 165 ISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQS 224
+ E I +++ ++ L + +QDE
Sbjct: 181 LEETISVKRTRTNK--------LLMEPLQDE----------------------------- 203
Query: 225 SYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFIT 284
P+ +F F +CNPPFF++M EA NP SC G+ EMV GGE AFI
Sbjct: 204 -----PL-------ERKFHFVMCNPPFFDNMNEADTNPDASCMGSANEMVFPGGEVAFIG 251
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+IE+SVAL+ W+TSM+GRKS+L+ L++ LR V +TTEF QG+T RWG+AW+F
Sbjct: 252 NMIEESVALQTRVLWFTSMIGRKSSLRKLLALLRDKHVQRTRTTEFFQGRTKRWGIAWTF 311
Query: 345 VP-----PARKII 352
P+ KI+
Sbjct: 312 FSDVVDDPSAKIL 324
>gi|255070007|ref|XP_002507085.1| sam-dependent methyltransferase [Micromonas sp. RCC299]
gi|226522360|gb|ACO68343.1| sam-dependent methyltransferase [Micromonas sp. RCC299]
Length = 513
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 180/346 (52%), Gaps = 46/346 (13%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
RR +HP+N ++ DF +L P F PFV G +++ + TR L R
Sbjct: 68 RRAAGIARMHPRNVFANIKADFFVLGKRQPCFRPFVEQCSLGLWYVNFKSWEVTRALNRA 127
Query: 68 LLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS-SNIIPTTSRNGDKVKGFDIGTG 125
LL+ +GL +W IP G LCP VPNR++YIHW+EDLL S+ + V+G DIG G
Sbjct: 128 LLVDVYGLVSWDIPKGHLCPPVPNRASYIHWLEDLLQLSHPCGRPGIECEGVRGIDIGVG 187
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
+NC++PLLG++ WSF+G D+TDVAL WA+KN NP ++ I+IR S +
Sbjct: 188 SNCVFPLLGSTANRWSFIGIDVTDVALIWADKNRLDNPDLASRIKIRDARRSGTL----- 242
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
HM V V+ GE+F FC
Sbjct: 243 -----------------HMKRNDSA----------------------VLAVQMGERFSFC 263
Query: 246 ICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
+CNPPFFE+M+ A NP T+ GGT E+ C GGE FI R+ +S+ K WYT+M G
Sbjct: 264 MCNPPFFETMKHAKRNPGTNFGGTLAELCCPGGEETFIRRMYNESLVTKDRVHWYTTMCG 323
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKI 351
+K LK L L V ++T F+QG+T RWG+AWSF A I
Sbjct: 324 KKETLKSLRCLLDMAKVPAIRTARFLQGKTVRWGVAWSFSAQALPI 369
>gi|47212445|emb|CAG11398.1| unnamed protein product [Tetraodon nigroviridis]
Length = 397
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 214/412 (51%), Gaps = 86/412 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDF LAS YP F+ V S GR +++ + A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFGYLASKYPDFQQHVHTSLTGRLVVNFKEPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L IP +L PTVP R NYIHW+EDL+ P +G DIGTGA+CIYPLLG
Sbjct: 66 LTIQIPLERLIPTVPLRLNYIHWVEDLIHGQKQPR--------RGIDIGTGASCIYPLLG 117
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A++ GW F+ +++ D+ ++A KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 118 ATMNGWYFLATEVDDICFDYATKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 168
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
E+ M +DFC+CNPPFF +
Sbjct: 169 ETEM------------------------------------------VYDFCMCNPPFFAN 186
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ +II DS+ LK+ RWY+ M+G
Sbjct: 187 QLEAKGVNSRNARRPPPSSVNTGGVTEIMAEGGELEFVKKIIHDSLQLKKRLRWYSCMLG 246
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LRK GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 247 KKCSLAPLKEELRKQGVPKVTHTEFCQGRTMRWALAWSFYDDAMAPSPPSKRRKLEKP-- 304
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSN 408
KK LSF L + L LQ+ + G S ++A + + T+S+
Sbjct: 305 --KKPLSFTLPE-----AGLKELQARASALGLPGCSSAVDAIAALLEKTLSD 349
>gi|410910090|ref|XP_003968523.1| PREDICTED: methyltransferase-like protein 16-like [Takifugu
rubripes]
Length = 554
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 198/370 (53%), Gaps = 81/370 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDF LAS YP F+ V S GRP +++ + A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFGYLASKYPDFQQHVHTSLTGRPVVNFKEPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L IP +L PTVP R NYIHW+EDL+ P +G DIGTGA+CIYPLLG
Sbjct: 66 LTIQIPLERLIPTVPLRLNYIHWVEDLIDGQKQPR--------RGIDIGTGASCIYPLLG 117
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A++ GW F+ +++ D+ ++A KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 118 ATMNGWYFLATEVDDICFDYATKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 168
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
E+ + +DFC+CNPPFF +
Sbjct: 169 ETEI------------------------------------------VYDFCMCNPPFFAN 186
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ +II DS+ LK+ RWY+ M+G
Sbjct: 187 QLEAKGVNSRNSRRPPPSSVNTGGVTEIMAEGGELEFVKKIIHDSLQLKKRLRWYSCMLG 246
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LRK GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 247 KKCSLAPLKEELRKQGVPKVTHTEFCQGRTMRWALAWSFYDDMMAPSPPSKRRKLEKP-- 304
Query: 357 AEKKNLSFML 366
+K LSF L
Sbjct: 305 --RKPLSFTL 312
>gi|432890693|ref|XP_004075481.1| PREDICTED: methyltransferase-like protein 16-like [Oryzias latipes]
Length = 547
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 191/352 (54%), Gaps = 75/352 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDFA LAS YP F+ V S GRP +++ + A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFAYLASKYPDFQQHVHTSLAGRPVVNFKEPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L IP +L PTVP R NYIHW+EDL+ P +G DIGTGA+CIYPLLG
Sbjct: 66 LTIEIPLERLIPTVPLRLNYIHWVEDLIDGQKKPR--------RGIDIGTGASCIYPLLG 117
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A++ GW F+ +++ D+ ++A KNV+ N ++S+L+++ KV Q++L ++++
Sbjct: 118 ATMNGWFFLATEVDDICFDYATKNVEQN-NLSDLVKVVKVP--------QKTLLMDALKE 168
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
E+ + +DFC+CNPPFF +
Sbjct: 169 ETEI------------------------------------------VYDFCMCNPPFFAN 186
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 187 QLEAKGVNSRNSRRPPPSSVNTGGVTEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 246
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARK 350
+K +L L +LRK GV V TEF QG+T RW LAWSF PP++K
Sbjct: 247 KKCSLAPLKEELRKQGVPKVTHTEFCQGRTMRWALAWSFYDDVIVPSPPSKK 298
>gi|213511596|ref|NP_001133665.1| methyltransferase METT10D [Salmo salar]
gi|209154866|gb|ACI33665.1| methyltransferase METT10D [Salmo salar]
Length = 589
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 197/368 (53%), Gaps = 77/368 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDFA LAS YP FE V + GR +++ + A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFAYLASKYPDFEQHVHTNLAGRAMLNFKEPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L IP +L PTVP R NYIHW+EDL+ G+ +G DIGTGA+CIYPLLG
Sbjct: 66 LTIDIPLERLIPTVPLRLNYIHWVEDLIGG--------RGEPRRGIDIGTGASCIYPLLG 117
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
AS+ GW ++ +++ D+ ++A +NV+ N ++S+LI++ KV Q++L ++++
Sbjct: 118 ASMNGWHYLATEVDDICFDYATRNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 168
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 169 ESAI------------------------------------------VYDFCMCNPPFFAN 186
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK RWY+ M+G
Sbjct: 187 QLEAKGVNSRNSRRPPPSSVNTGGVTEIMAEGGELEFVKRIIHDSLQLKTRLRWYSCMLG 246
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARKIISPHVAE 358
+K +L L +LRK GV V TEF QG+T RW LAWSF PP++K
Sbjct: 247 KKCSLAPLKEELRKQGVPKVTHTEFCQGRTMRWALAWSFYDDVTVPSPPSKK--RKLEKS 304
Query: 359 KKNLSFML 366
+K L+FML
Sbjct: 305 RKPLTFML 312
>gi|57525677|ref|NP_001003611.1| methyltransferase-like protein 16 [Danio rerio]
gi|82182171|sp|Q6DC64.1|MET16_DANRE RecName: Full=Methyltransferase-like protein 16; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|50417838|gb|AAH78220.1| Methyltransferase 10 domain containing [Danio rerio]
Length = 471
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 189/352 (53%), Gaps = 76/352 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDF LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFVYLASKYPEFQKHVQTTLTGRVTLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L IP +L PTVP R NYIHW+EDL+ G+ +G DIGTGA+CIYPLLG
Sbjct: 66 LTIEIPLERLIPTVPLRLNYIHWVEDLIGG--------QGNPQRGIDIGTGASCIYPLLG 117
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A++ GW F+ +++ D+ +A+KNV+ N H++ELI++ KV Q++L ++++
Sbjct: 118 ATMNGWFFLATEVDDICFNYAKKNVEQN-HLAELIKVVKVP--------QKTLLMDALKE 168
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 169 ESIV-------------------------------------------YDFCMCNPPFFAN 185
Query: 255 MEEA-GLNPKTSCGGTPE--------EMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N + S P E++ GGE F+ R+I DS+ LK+ RWY+ M+G
Sbjct: 186 QLEAKGVNSRNSRRPPPSSINTGGVTEIMAEGGELEFVKRVIHDSLQLKKRLRWYSCMLG 245
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARK 350
+K +L L +LRK GV V TEF QG+T RW LAWSF PP +K
Sbjct: 246 KKCSLAPLKDELRKQGVAKVTHTEFCQGRTMRWALAWSFYDDVPVPSPPCKK 297
>gi|440801543|gb|ELR22561.1| hypothetical protein ACA1_142640 [Acanthamoeba castellanii str.
Neff]
Length = 568
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 172/334 (51%), Gaps = 60/334 (17%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER + Y DF +LA V+ + G IDW D A RE+T LL +
Sbjct: 37 ERCNAATSSVYKARTTDFRVLAEA-------VYTNNYGSASIDWKDPYAAREVTYALLKN 89
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
D L IP QLCP VPNR+NYI+W+ DLL N + +V+G DIGTGA+CIYP
Sbjct: 90 DFDLELDIPIDQLCPPVPNRANYIYWLRDLLHRNSPQLCTGPDTRVRGLDIGTGASCIYP 149
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGA + GWSFV +D+ + +L A NV N + IE+R +S P
Sbjct: 150 LLGAKIHGWSFVATDIDETSLRHARHNVALN-RLEATIELR-----QSRPD--------- 194
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L+G +R GE+ F +CNPPF
Sbjct: 195 --------------------------------------DLLLGALRPGEELAFSMCNPPF 216
Query: 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
F +EEA NP+T C GTP E+V +GGE F+ R+I +S+ L+ T RWYTSM+G+KS+L
Sbjct: 217 FAHLEEACQNPRTVCTGTPNELVTAGGEVQFVERMINESLVLRHTIRWYTSMLGKKSDLN 276
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
L+ L G+ V TT F QG+T RWGLAWS
Sbjct: 277 ALLKTLAAKGIVNVHTTTFYQGKTTRWGLAWSLT 310
>gi|194332777|ref|NP_001123689.1| methyltransferase like 16 [Xenopus (Silurana) tropicalis]
gi|189442163|gb|AAI67265.1| LOC100170444 protein [Xenopus (Silurana) tropicalis]
Length = 549
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 215/415 (51%), Gaps = 82/415 (19%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDFA LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFAYLASKYPEFKQHVNVNLAGRVSLNFKDPCAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV---KGFDIGTGANCIYP 131
L IP +L PTVP R NYIHW+EDL++ + + DK +G DIGTGA+CIYP
Sbjct: 66 LTIDIPLERLIPTVPLRLNYIHWVEDLINYH-------DSDKTALRRGIDIGTGASCIYP 118
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGA+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L +
Sbjct: 119 LLGATLNGWYFLATEVDDICYNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDA 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+++ES + +DFC+CNPPF
Sbjct: 170 LKEESEI------------------------------------------IYDFCMCNPPF 187
Query: 252 FESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F + EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+
Sbjct: 188 FANQLEAQGVNSRNPHRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLKLKKRLRWYSC 247
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNL 362
M+G+K +L L +LRK GV V TEF QG+T RW LAWSF ++I P+ +K+ L
Sbjct: 248 MLGKKCSLAPLKEELRKQGVPRVAHTEFYQGRTMRWALAWSFY---EEVIIPNPPKKRKL 304
Query: 363 SFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKN 417
R+ VL+S+ S S +ITV D IL +
Sbjct: 305 E-----KPRKPMVFTVLESVIKLLVEKLPS----GSEVPESITVVTDCIKKILTD 350
>gi|327275646|ref|XP_003222584.1| PREDICTED: putative methyltransferase METT10D-like [Anolis
carolinensis]
Length = 559
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 209/392 (53%), Gaps = 70/392 (17%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFASLASKYPEFKQHVQINLSGRVSVNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L IP +L PTVP R NYIHW+EDL++ T+ + G DIGTGA+CIYPLLG
Sbjct: 66 LQIDIPLERLIPTVPLRLNYIHWVEDLIAQQ---ETAAKDSVIWGIDIGTGASCIYPLLG 122
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ DV +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 123 ATLNGWYFIATEVDDVCFSYAKKNVEQN-NLSDLIKVVKVP--------QKTLLLDALEE 173
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+S + +DFC+CNPPFF +
Sbjct: 174 KSEV------------------------------------------IYDFCMCNPPFFAN 191
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 192 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 251
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFM 365
+K +L L +LR GV V TEF QG+T RW LAWSF K++SP ++K
Sbjct: 252 KKCSLAPLKKELRIHGVPKVTHTEFCQGRTMRWALAWSFYENV-KVLSPPSKKRK----- 305
Query: 366 LEGVQRQFSALDVLQSIETFFSASGASCKLNA 397
LE ++ F+ L VL SI + S ++A
Sbjct: 306 LEKPRKPFTFL-VLASIAKELAVKAPSVGIDA 336
>gi|66820304|ref|XP_643782.1| hypothetical protein DDB_G0275203 [Dictyostelium discoideum AX4]
gi|74997315|sp|Q554C9.1|MET16_DICDI RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|60471928|gb|EAL69882.1| hypothetical protein DDB_G0275203 [Dictyostelium discoideum AX4]
Length = 568
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 198/355 (55%), Gaps = 43/355 (12%)
Query: 3 SKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATR 62
+KK+R+R + ++H N Y NPP+F LLAS YP+F+ ++ + IDW D NAT+
Sbjct: 31 TKKKRKRSND--SMHINNFYRYNPPNFKLLASKYPTFDKYIINKTEKIYNIDWKDSNATK 88
Query: 63 ELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSS-NIIPTTSRNGDKV-KGF 120
ELTRVLL HD GL +PD LCPT+ R NY++WI D L + II + N +K+ KG
Sbjct: 89 ELTRVLLDHDFGLRIELPDNYLCPTLTLRINYLYWISDQLKNLKIILNDNDNDNKIIKGI 148
Query: 121 DIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIGTG +CI+PLLGA L WSF+G D+ D LE+A+ N+ N
Sbjct: 149 DIGTGTSCIFPLLGAKLFNNWSFIGIDIDDKVLEYAQNNITIN----------------- 191
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
S+ +T ++E N D+ + E S++FN SS D
Sbjct: 192 --SLNSKIT--LFKNEKNSDILLKLLNYKE--GSNTFN------SSNDDHQDNHDDDDDD 239
Query: 240 EQF--DFCICNPPFFESMEEAGLNPKTS----CGGTPEEMVCSGGERAFITRIIEDSVAL 293
E++ DFC+CNPPFF+ + E N + C G+ EMV GGE F+ RII++S L
Sbjct: 240 EEYFADFCLCNPPFFKDLNENNNNKNNNPKSNCTGSVNEMVTDGGEFEFVKRIIKESFQL 299
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRK---VGVTIVKTTEFVQGQTCRWGLAWSFV 345
K R+YT+M+GRK NL LI+ L K + ++TTE VQG T RW L+W F+
Sbjct: 300 KCKIRFYTTMIGRKVNLNPLINILIKQYYLPKNQIQTTELVQGNTSRWVLSWYFL 354
>gi|303272059|ref|XP_003055391.1| sam-dependent methyltransferase [Micromonas pusilla CCMP1545]
gi|226463365|gb|EEH60643.1| sam-dependent methyltransferase [Micromonas pusilla CCMP1545]
Length = 563
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/335 (40%), Positives = 178/335 (53%), Gaps = 44/335 (13%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG- 74
+HP+N Y E PDFA LA +P+ P + GR ID+T ++ATREL +L D+G
Sbjct: 119 MHPRNAYREKNPDFAALAKRHPALLPHLRSRGKGRHVIDFTSYDATRELNAAMLAVDYGI 178
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L W +P G L P V NR+NY+HWI+DLL ++ G V G D+G GANC+YPL+G
Sbjct: 179 LRWTVPPGHLIPPVANRANYVHWIQDLLRASRPDGVEIAGPTVLGLDVGVGANCVYPLIG 238
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GW FVG D+ D AL A N +N +++ LIEIR
Sbjct: 239 AATHGWRFVGCDVADAALAAATANASANANVASLIEIRD--------------------- 277
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
S + E LPA +RDGE+F F +CNPPFFE+
Sbjct: 278 ------SRRGEGGGEGGGGDGVLLPA---------------IRDGERFAFSMCNPPFFET 316
Query: 255 MEEAGLNPKTSCGGTPEEMVC-SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
M EA LN T+ GGT EM +GGE AF+ + EDS+ L WYT+M G+K +K L
Sbjct: 317 MAEAELNAGTNFGGTETEMCYPNGGEHAFVRAMYEDSLTLLDRVHWYTTMCGKKETMKKL 376
Query: 314 ISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
L +TTEF+QG+T RWG+AWSF A
Sbjct: 377 RRALEMRSSITFRTTEFLQGRTMRWGIAWSFAKDA 411
>gi|148231678|ref|NP_001085334.1| methyltransferase-like protein 16 [Xenopus laevis]
gi|82184721|sp|Q6GR37.1|MET16_XENLA RecName: Full=Methyltransferase-like protein 16; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|49257234|gb|AAH71096.1| MGC81116 protein [Xenopus laevis]
Length = 547
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 197/360 (54%), Gaps = 73/360 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDFA LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFAYLASKYPEFKQHVNVNLAGRVSLNFKDPCAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV---KGFDIGTGANCIYP 131
L IP +L PTVP R NYIHW+EDL++ + + DK +G DIGTGA+CIYP
Sbjct: 66 LTIDIPLERLIPTVPLRLNYIHWVEDLINYH-------DSDKTALRRGIDIGTGASCIYP 118
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGA+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L +
Sbjct: 119 LLGATLNGWYFLATEVDDICYNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDA 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+++ES + +DFC+CNPPF
Sbjct: 170 LKEESEI------------------------------------------IYDFCMCNPPF 187
Query: 252 FESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F + EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+
Sbjct: 188 FANQLEAQGVNSRNPHRSPPSSVNTGGITEIMAEGGELEFVKRIIHDSLKLKKRLRWYSC 247
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNL 362
M+G+K +L L +LR GV V TEF QG+T RW LAWSF ++I P+ +K+ L
Sbjct: 248 MLGKKCSLAPLKEELRLQGVPKVAHTEFYQGRTMRWALAWSFY---EEVIIPNPPKKRKL 304
>gi|351704181|gb|EHB07100.1| Putative methyltransferase METT10D, partial [Heterocephalus glaber]
Length = 560
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 206/379 (54%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHVRNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ T+ +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDADKTTLR----RGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNARRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV+ V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVSKVTFTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 --RKPITFVVLESVMKELS 325
>gi|348567871|ref|XP_003469722.1| PREDICTED: methyltransferase-like protein 16-like [Cavia porcellus]
Length = 552
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 207/382 (54%), Gaps = 84/382 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV---KGFDIGTGANCIYP 131
L+ IP +L PTVP R NYIHW+EDL+ ++ DK +G DIGTGA+CIYP
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIG-------HQDADKTPLRRGIDIGTGASCIYP 118
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGA+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L +
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDA 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+++ES + +DFC+CNPPF
Sbjct: 170 LKEESEI------------------------------------------IYDFCMCNPPF 187
Query: 252 FESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F + EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+
Sbjct: 188 FANQLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSC 247
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIIS 353
M+G+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+
Sbjct: 248 MLGKKCSLAPLKEELRIQGVPKVTFTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEK 307
Query: 354 PHVAEKKNLSF-MLEGVQRQFS 374
P +K ++F +LE V ++ S
Sbjct: 308 P----RKPITFVVLESVMKELS 325
>gi|355568078|gb|EHH24359.1| hypothetical protein EGK_08004 [Macaca mulatta]
Length = 581
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 218/429 (50%), Gaps = 89/429 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 26 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 85
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 86 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 141
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 142 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 192
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 193 ESEI------------------------------------------IYDFCMCNPPFFAN 210
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 211 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 270
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 271 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 328
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILK 416
+K ++F+ VL S+ S +S + V +T +Q T LK
Sbjct: 329 --RKPITFV------------VLASVMKELSLRASSLGSETAEGIVAVTAWIEQILTDLK 374
Query: 417 NEVNRVDEG 425
+ RV G
Sbjct: 375 VQHKRVPCG 383
>gi|21312938|ref|NP_080473.1| methyltransferase-like protein 16 [Mus musculus]
gi|81903550|sp|Q9CQG2.1|MET16_MOUSE RecName: Full=Methyltransferase-like protein 16; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|12849683|dbj|BAB28440.1| unnamed protein product [Mus musculus]
gi|29436824|gb|AAH49897.1| Methyltransferase 10 domain containing [Mus musculus]
gi|32451971|gb|AAH54724.1| Methyltransferase 10 domain containing [Mus musculus]
gi|74216910|dbj|BAE26574.1| unnamed protein product [Mus musculus]
gi|74222968|dbj|BAE40630.1| unnamed protein product [Mus musculus]
gi|148680832|gb|EDL12779.1| methyltransferase 10 domain containing, isoform CRA_c [Mus
musculus]
Length = 553
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 205/379 (54%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ + + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHIQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ T+ +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKTTLR----RGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------VYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTFTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 --RKPITFVVLESVMKELS 325
>gi|308810080|ref|XP_003082349.1| OSJNBb0088N06.22 gene product (ISS) [Ostreococcus tauri]
gi|116060817|emb|CAL57295.1| OSJNBb0088N06.22 gene product (ISS) [Ostreococcus tauri]
Length = 337
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 180/320 (56%), Gaps = 52/320 (16%)
Query: 30 ALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTV 88
A LAS + S+E +R R +ID+T + ATR LT +L HG W +P+G L PT
Sbjct: 40 ARLAS-HASWETLEDGTR--RAKIDFTSWEATRALTGAILAVRHGARGWDVPEGHLVPTT 96
Query: 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT 148
NR Y+ WIE LL+ + P + G+ V G D+GTGA+ IYPL+GAS GW FVG+D+T
Sbjct: 97 TNRRRYVEWIERLLAVSA-PEGVKGGEGVVGLDVGTGASVIYPLIGASTRGWRFVGTDVT 155
Query: 149 DVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEA 208
D AL A +NV+ NPH+ LIEIR +DE+
Sbjct: 156 DEALRSARENVERNPHLEALIEIR------------------DARDEN------------ 185
Query: 209 EPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGG 268
G +++ V GVVR+GE F F +CNPPFFESMEEAG NP T+CGG
Sbjct: 186 ------------GGRAN-----VFRGVVREGETFAFSMCNPPFFESMEEAGKNPNTACGG 228
Query: 269 TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328
T EMVC GGE AF+ R+ +S+ +K W+T+M G+KS + + + + V ++TT
Sbjct: 229 TEIEMVCEGGEEAFVKRMFNESLEMKHAVHWFTTMCGKKSTMTKMRALFHVLRVPAIRTT 288
Query: 329 EFVQGQTCRWGLAWSFVPPA 348
E V G+T RW +AWS+ A
Sbjct: 289 ELVHGKTSRWCIAWSWSKEA 308
>gi|14042068|dbj|BAB55094.1| unnamed protein product [Homo sapiens]
Length = 504
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 218/429 (50%), Gaps = 89/429 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + DGR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLDGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILK 416
+K ++F+ VL S+ S + + + V +T ++ T LK
Sbjct: 309 --RKPITFV------------VLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLK 354
Query: 417 NEVNRVDEG 425
+ RV G
Sbjct: 355 VQHKRVPCG 363
>gi|291405354|ref|XP_002718920.1| PREDICTED: methyltransferase 10 domain containing [Oryctolagus
cuniculus]
Length = 562
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 204/379 (53%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPVERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEKN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGVTEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRVQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 --RKPITFVVLESVMKELS 325
>gi|12848120|dbj|BAB27835.1| unnamed protein product [Mus musculus]
Length = 553
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 205/379 (54%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ + + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHIQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ T+ +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKTTLR----RGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------VYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTFTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 --RKPITFVVLESVMKELS 325
>gi|67967559|dbj|BAE00262.1| unnamed protein product [Macaca fascicularis]
Length = 607
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 218/429 (50%), Gaps = 89/429 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEII------------------------------------------YDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILK 416
+K ++F+ VL S+ S +S + V +T +Q T LK
Sbjct: 309 --RKPITFV------------VLASVMKELSLRASSLGSETAEGIVAVTAWIEQILTDLK 354
Query: 417 NEVNRVDEG 425
+ RV G
Sbjct: 355 VQHKRVPCG 363
>gi|31873510|emb|CAD89999.2| hypothetical protein [Homo sapiens]
Length = 425
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 218/429 (50%), Gaps = 89/429 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGAITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILK 416
+K ++F+ VL S+ S + + + V +T ++ T LK
Sbjct: 309 --RKPITFV------------VLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLK 354
Query: 417 NEVNRVDEG 425
+ RV G
Sbjct: 355 VQHKRVPCG 363
>gi|354490341|ref|XP_003507317.1| PREDICTED: methyltransferase-like protein 16 [Cricetulus griseus]
gi|344258112|gb|EGW14216.1| Putative methyltransferase METT10D [Cricetulus griseus]
Length = 553
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 203/379 (53%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ + + GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHIQINLSGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----ASDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAQGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTFTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 --RKPITFVVLESVMKELS 325
>gi|114665652|ref|XP_523533.2| PREDICTED: methyltransferase like 16 isoform 2 [Pan troglodytes]
gi|410222680|gb|JAA08559.1| methyltransferase like 16 [Pan troglodytes]
gi|410261014|gb|JAA18473.1| methyltransferase like 16 [Pan troglodytes]
gi|410293342|gb|JAA25271.1| methyltransferase like 16 [Pan troglodytes]
gi|410341579|gb|JAA39736.1| methyltransferase like 16 [Pan troglodytes]
Length = 562
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 218/429 (50%), Gaps = 89/429 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILK 416
+K ++F+ VL S+ S + + + V +T ++ T LK
Sbjct: 309 --RKPITFV------------VLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLK 354
Query: 417 NEVNRVDEG 425
+ RV G
Sbjct: 355 VQHKRVPCG 363
>gi|426383477|ref|XP_004058306.1| PREDICTED: methyltransferase-like protein 16 [Gorilla gorilla
gorilla]
Length = 562
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 203/379 (53%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEII------------------------------------------YDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +L V ++ S
Sbjct: 309 --RKPITFVVLASVMKELS 325
>gi|397491978|ref|XP_003816912.1| PREDICTED: methyltransferase-like protein 16 [Pan paniscus]
Length = 562
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 218/429 (50%), Gaps = 89/429 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILK 416
+K ++F+ VL S+ S + + + V +T ++ T LK
Sbjct: 309 --RKPITFV------------VLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLK 354
Query: 417 NEVNRVDEG 425
+ RV G
Sbjct: 355 VQHKRVPCG 363
>gi|344290617|ref|XP_003417034.1| PREDICTED: methyltransferase-like protein 16 [Loxodonta africana]
Length = 561
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 185/339 (54%), Gaps = 64/339 (18%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDRSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDICFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+K +L L +LR GV V TEF QG+T RW LAWSF
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSF 289
>gi|122114654|ref|NP_076991.3| methyltransferase-like protein 16 [Homo sapiens]
gi|269849619|sp|Q86W50.2|MET16_HUMAN RecName: Full=Methyltransferase-like protein 16; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|119610943|gb|EAW90537.1| methyltransferase 10 domain containing, isoform CRA_a [Homo
sapiens]
gi|119610944|gb|EAW90538.1| methyltransferase 10 domain containing, isoform CRA_a [Homo
sapiens]
gi|307686401|dbj|BAJ21131.1| methyltransferase 10 domain containing [synthetic construct]
Length = 562
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 218/429 (50%), Gaps = 89/429 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILK 416
+K ++F+ VL S+ S + + + V +T ++ T LK
Sbjct: 309 --RKPITFV------------VLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLK 354
Query: 417 NEVNRVDEG 425
+ RV G
Sbjct: 355 VQHKRVPCG 363
>gi|395853241|ref|XP_003799124.1| PREDICTED: methyltransferase-like protein 16 [Otolemur garnettii]
Length = 561
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 203/379 (53%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTVRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +L V ++ S
Sbjct: 309 --RKPITFVVLASVMKELS 325
>gi|29791720|gb|AAH50603.1| Methyltransferase 10 domain containing [Homo sapiens]
Length = 562
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 218/429 (50%), Gaps = 89/429 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILK 416
+K ++F+ VL S+ S + + + V +T ++ T LK
Sbjct: 309 --RKPITFV------------VLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLK 354
Query: 417 NEVNRVDEG 425
+ RV G
Sbjct: 355 VQHKRVPCG 363
>gi|194217439|ref|XP_001504422.2| PREDICTED: methyltransferase like 16 [Equus caballus]
Length = 561
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 202/379 (53%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHVRNRYKDKPPDFAYLASKYPDFKQHVQINLSGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 --RKPITFVVLESVMKELS 325
>gi|431891040|gb|ELK01919.1| Putative methyltransferase METT10D [Pteropus alecto]
Length = 576
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 205/379 (54%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 21 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLKEDFG 80
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ T+ +G DIGTGA+CIYPLLG
Sbjct: 81 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKTTLR----RGIDIGTGASCIYPLLG 136
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
++L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 137 STLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 187
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 188 ESEI------------------------------------------VYDFCMCNPPFFAN 205
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 206 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 265
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 266 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 323
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ +
Sbjct: 324 --RKPITFVVLESVMKELT 340
>gi|296200999|ref|XP_002747852.1| PREDICTED: methyltransferase-like protein 16 [Callithrix jacchus]
Length = 570
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 203/379 (53%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSSLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +L V ++ S
Sbjct: 309 --RKPITFVVLASVMKELS 325
>gi|410980185|ref|XP_003996459.1| PREDICTED: methyltransferase-like protein 16 [Felis catus]
Length = 561
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 201/377 (53%), Gaps = 74/377 (19%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARKIISPHVAE 358
+K +L L +LR GV V TEF QG+T RW LAWSF PP+++
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKR--RKLEKS 308
Query: 359 KKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 RKPITFVVLESVMKELS 325
>gi|149637021|ref|XP_001508494.1| PREDICTED: methyltransferase like 16 [Ornithorhynchus anatinus]
Length = 563
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 203/380 (53%), Gaps = 78/380 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHVRNRYKDKPPDFAFLASKYPDFKQHVQINLSGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L IP +L PTVP R NYIHW+EDL+ + S +G DIGTGA+CIYPLLG
Sbjct: 66 LTIDIPLERLIPTVPLRLNYIHWVEDLIGHH----DSLKNTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTHTEFCQGRTMRWALAWSFYDDVTVPSPPSKKRKLEKP-- 308
Query: 357 AEKKNLSFM-LEGVQRQFSA 375
+K ++F+ +E V ++ +
Sbjct: 309 --RKPITFLVVESVMKELAV 326
>gi|426237310|ref|XP_004012604.1| PREDICTED: methyltransferase-like protein 16 [Ovis aries]
Length = 561
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 202/375 (53%), Gaps = 83/375 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LA+ YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLATKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV---KGFDIGTGANCIYP 131
L+ IP +L PTVP R NYIHW+EDL+ +N DK +G DIGTGA+CIYP
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIG-------HQNSDKSTLRRGIDIGTGASCIYP 118
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG +L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L +
Sbjct: 119 LLGTTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDA 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+++ES + +DFC+CNPPF
Sbjct: 170 LKEESEI------------------------------------------IYDFCMCNPPF 187
Query: 252 FESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F + EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+
Sbjct: 188 FANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSC 247
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIIS 353
M+G+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+
Sbjct: 248 MLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEK 307
Query: 354 PHVAEKKNLSFMLEG 368
P +K ++F++ G
Sbjct: 308 P----RKPITFVVLG 318
>gi|355702199|gb|AES01853.1| methyltransferase 10 domain containing [Mustela putorius furo]
Length = 432
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/420 (35%), Positives = 216/420 (51%), Gaps = 71/420 (16%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LA+ YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLATKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFM 365
+K +L L +LR GV V TEF QG+T RW LAWSF + SP +K
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDV-TVPSPPSKRRK----- 304
Query: 366 LEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEG 425
LE ++ + + VL+S+ S +S A V +T ++ T LK + RV G
Sbjct: 305 LEKSRKPITFI-VLESVMKELSLKASSLGSEAVEGIVVVTAWIEKILTDLKVQHKRVPCG 363
>gi|325184826|emb|CCA19318.1| putative methyltransferase METT10D [Albugo laibachii Nc14]
Length = 480
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 196/380 (51%), Gaps = 75/380 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFV--FYSRDGRPRIDWTDFNATRELTRVLLLHDH 73
+H +N+Y +PPDF LA +PS P + R R W D A RELT LL HD
Sbjct: 16 LHERNRYRNSPPDFYALAQKFPSLSPHLRNVDIRRKRAAFAWEDPYALRELTTALLKHDF 75
Query: 74 GLNWWIPDGQLCPTVPNRSNYIHWIEDL--------LSSNIIPTTSRNGDKVKGFDIGTG 125
G+ W IP +LCP VPNR NY+HW+E+L L + + S + V+G DIGTG
Sbjct: 76 GIKWSIPINRLCPPVPNRLNYLHWMEELAEEADRKSLVVDELSAQSESTKVVRGLDIGTG 135
Query: 126 ANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK-VDNSESTPSI 183
A+CI+PLLG SL W+F+ +++ + A N+++NPH+++ IE++ VDN T
Sbjct: 136 ASCIFPLLGTSLHPDWTFIATEIDSTSYSAALINLRNNPHLAQRIELKHAVDNQFFT--- 192
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
E+L GK + +F +
Sbjct: 193 -EALNGKF-------------------KCAITFTM------------------------- 207
Query: 244 FCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303
CNPPFF + E L+P+ C G+P EM+ GGE F++ +++ SV K+ W+TSM
Sbjct: 208 ---CNPPFFANSNEIQLHPQAFCMGSPIEMIYPGGEVRFVSEMLDQSVTFKKRIIWFTSM 264
Query: 304 VGRKSNLKFLISKLRKV-GVTIVKTTEFVQGQTCRWGLAWSFVPPAR-----------KI 351
+G+KS+L+ L++KLR V GVT TTEF QGQT RWG+AW+F R K+
Sbjct: 265 LGKKSSLRPLLAKLRSVQGVTYYCTTEFCQGQTKRWGIAWTFNEQLRNAFASSKGVVTKV 324
Query: 352 ISPHVAEKKNLSFMLEGVQR 371
+ A++K S + + +
Sbjct: 325 LGKRKAQRKRHSLEFQTIDK 344
>gi|300794745|ref|NP_001179145.1| methyltransferase-like protein 16 [Bos taurus]
gi|296476897|tpg|DAA19012.1| TPA: methyltransferase 10 domain containing-like [Bos taurus]
Length = 561
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 202/375 (53%), Gaps = 83/375 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LA+ YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLATKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV---KGFDIGTGANCIYP 131
L+ IP +L PTVP R NYIHW+EDL+ +N DK +G DIGTGA+CIYP
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIG-------HQNSDKSTLRRGIDIGTGASCIYP 118
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG +L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L +
Sbjct: 119 LLGTTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDA 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+++ES + +DFC+CNPPF
Sbjct: 170 LKEESEI------------------------------------------IYDFCMCNPPF 187
Query: 252 FESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F + EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+
Sbjct: 188 FANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSC 247
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIIS 353
M+G+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+
Sbjct: 248 MLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEK 307
Query: 354 PHVAEKKNLSFMLEG 368
P +K ++F++ G
Sbjct: 308 P----RKPITFVVLG 318
>gi|441662504|ref|XP_003277873.2| PREDICTED: LOW QUALITY PROTEIN: methyltransferase-like protein 16
[Nomascus leucogenys]
Length = 607
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 203/379 (53%), Gaps = 78/379 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEII------------------------------------------YDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHV 356
+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP-- 308
Query: 357 AEKKNLSF-MLEGVQRQFS 374
+K ++F +L V ++ S
Sbjct: 309 --RKPITFVVLASVMKELS 325
>gi|330790811|ref|XP_003283489.1| hypothetical protein DICPUDRAFT_25940 [Dictyostelium purpureum]
gi|325086599|gb|EGC39986.1| hypothetical protein DICPUDRAFT_25940 [Dictyostelium purpureum]
Length = 447
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 183/341 (53%), Gaps = 57/341 (16%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y NPP+F +LA+ YPSF+ F+ + IDW D NATRE TRVLL HD GL
Sbjct: 1 MHPQNFYRYNPPNFKILANKYPSFDKFIVNKTEKIFNIDWKDPNATREFTRVLLDHDFGL 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P+ LCPT+ RSNY++W+ + L+ I + VKG DIGTGA+CI+PLLG
Sbjct: 61 KIELPEDYLCPTITLRSNYLYWLNEKLNDLGIDV----NNVVKGIDIGTGASCIFPLLGV 116
Query: 136 SLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
L WSF+G D+ D +L++A+KN++ N SL K
Sbjct: 117 KLFKNWSFLGLDIDDSSLKFAKKNIELN-----------------------SLESK---- 149
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+S +E E + F G + ++ E FDFC+CNPPFF
Sbjct: 150 -----ISLFKNENKEKILFNYFQANQGEE-------------KNEEVFDFCLCNPPFFND 191
Query: 255 MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN-LKFL 313
+ E +NPK++C G+ E+V GGE FI +IIE+S+ LK ++Y+SMVGRK N L
Sbjct: 192 LSETNINPKSTCTGSANELVTEGGEFIFIKKIIEESIVLKSKIKFYSSMVGRKCNLKPLL 251
Query: 314 ISKLRKVGV--TIVKTTEFVQGQTCRWGLAW----SFVPPA 348
+ G+ + + T E QG T RW + W SF P +
Sbjct: 252 DLLKKNFGLPNSKIFTAELSQGNTHRWVMGWIVDDSFQPSS 292
>gi|73967244|ref|XP_537774.2| PREDICTED: methyltransferase like 16 isoform 1 [Canis lupus
familiaris]
Length = 561
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 200/377 (53%), Gaps = 74/377 (19%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLSGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----GSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARKIISPHVAE 358
+K +L L +LR GV V TEF QG+T RW LAWSF PP+++
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKR--RKLEKS 308
Query: 359 KKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 RKPITFVVLESVMKELS 325
>gi|440909779|gb|ELR59654.1| Putative methyltransferase METT10D [Bos grunniens mutus]
Length = 501
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 202/375 (53%), Gaps = 83/375 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LA+ YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLATKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV---KGFDIGTGANCIYP 131
L+ IP +L PTVP R NYIHW+EDL+ +N DK +G DIGTGA+CIYP
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIG-------HQNSDKSTLRRGIDIGTGASCIYP 118
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG +L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L +
Sbjct: 119 LLGTTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDA 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+++ES + +DFC+CNPPF
Sbjct: 170 LKEESEI------------------------------------------IYDFCMCNPPF 187
Query: 252 FESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F + EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+
Sbjct: 188 FANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSC 247
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIIS 353
M+G+K +L L +LR GV V TEF QG+T RW LAWSF PP+ RK+
Sbjct: 248 MLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEK 307
Query: 354 PHVAEKKNLSFMLEG 368
P +K ++F++ G
Sbjct: 308 P----RKPITFVVLG 318
>gi|126314177|ref|XP_001365198.1| PREDICTED: methyltransferase like 16 [Monodelphis domestica]
Length = 557
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 189/352 (53%), Gaps = 71/352 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLTGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ P +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIG----PWDPARSALRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARK 350
+K +L L +LR GV V TEF QG+T RW LAWSF PP+++
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTHTEFCQGRTMRWALAWSFYDDVTVPSPPSKR 302
>gi|281342346|gb|EFB17930.1| hypothetical protein PANDA_006455 [Ailuropoda melanoleuca]
Length = 560
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 201/377 (53%), Gaps = 74/377 (19%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LA+ YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLATKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTVRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARKIISPHVAE 358
+K +L L +LR GV V TEF QG+T RW LAWSF PP+++
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTHTEFCQGRTMRWALAWSFYDDVTVPSPPSKR--RKLEKS 308
Query: 359 KKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 RKPITFVVLESVMKELS 325
>gi|301765296|ref|XP_002918068.1| PREDICTED: putative methyltransferase METT10D-like [Ailuropoda
melanoleuca]
Length = 561
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 201/377 (53%), Gaps = 74/377 (19%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LA+ YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLATKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTVRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARKIISPHVAE 358
+K +L L +LR GV V TEF QG+T RW LAWSF PP+++
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTHTEFCQGRTMRWALAWSFYDDVTVPSPPSKR--RKLEKS 308
Query: 359 KKNLSF-MLEGVQRQFS 374
+K ++F +LE V ++ S
Sbjct: 309 RKPITFVVLESVMKELS 325
>gi|395536324|ref|XP_003770170.1| PREDICTED: methyltransferase-like protein 16 [Sarcophilus harrisii]
Length = 555
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 184/339 (54%), Gaps = 64/339 (18%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLTGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ P + +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIG----PWDPASSALRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N +S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-SLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+K +L L +LR GV V TEF QG+T RW LAWSF
Sbjct: 251 KKCSLAPLKEELRIQGVPKVTHTEFCQGRTMRWALAWSF 289
>gi|71896227|ref|NP_001026773.1| methyltransferase-like protein 16 [Gallus gallus]
gi|82081052|sp|Q5ZIA0.1|MET16_CHICK RecName: Full=Methyltransferase-like protein 16; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|53136428|emb|CAG32543.1| hypothetical protein RCJMB04_28o5 [Gallus gallus]
Length = 558
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 189/355 (53%), Gaps = 77/355 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LA YP F V + GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLAGKYPEFRQHVQTTLAGRVSLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDK---VKGFDIGTGANCIYP 131
L IP +L PTVP R NYIHW+EDL+ ++ DK +G DIGTGA+CIYP
Sbjct: 66 LTIDIPLERLIPTVPLRLNYIHWVEDLIG-------HQDADKRVLRRGIDIGTGASCIYP 118
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG++L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L +
Sbjct: 119 LLGSTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDA 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+++ES + +DFC+CNPPF
Sbjct: 170 LKEESEI------------------------------------------IYDFCMCNPPF 187
Query: 252 FESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F + EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+
Sbjct: 188 FANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSC 247
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARK 350
M+G+K +L L +L+ GV V TEF QG+T RW LAWSF PP+++
Sbjct: 248 MLGKKCSLAPLKEELKIQGVPKVTHTEFCQGRTMRWALAWSFYDDVQVPSPPSKR 302
>gi|145352664|ref|XP_001420658.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580893|gb|ABO98951.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 245
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 159/293 (54%), Gaps = 51/293 (17%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
+D+ D+++TR LT +L ++G+ W +P G+L PT NR Y+ W+ L + + S
Sbjct: 3 VDFKDWDSTRALTGAILREEYGVEAWTVPRGRLVPTATNRERYLEWLARLRA---LSAPS 59
Query: 112 RNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171
+ V DIGTGA+ IY LLGA+ GW FVG+D+ D AL A +NV+ NPH+ LIEI
Sbjct: 60 GDDASVWVLDIGTGASAIYALLGAAGRGWRFVGTDVCDEALTSARENVRRNPHLESLIEI 119
Query: 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231
R + GA+ V
Sbjct: 120 RDARGED------------------------------------------GARDR-----V 132
Query: 232 LVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
L GVVRDGE F FC+CNPPFFE+M+EAG NP T+CGGT EMV GGE AF+ +I DS+
Sbjct: 133 LRGVVRDGETFTFCMCNPPFFETMDEAGRNPNTACGGTATEMVFPGGEEAFVKKIFADSL 192
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+K + W+T+M G+KS + S L V ++TTE G+T RW +AWSF
Sbjct: 193 TMKDSIHWFTTMCGKKSTMTTTRSFLHTHRVPAIRTTELSHGKTSRWCIAWSF 245
>gi|148680830|gb|EDL12777.1| methyltransferase 10 domain containing, isoform CRA_a [Mus
musculus]
Length = 625
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 209/422 (49%), Gaps = 124/422 (29%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ + + +GR +++ D A R LT LL D G
Sbjct: 38 SMHARNRYKDKPPDFAYLASKYPDFKQHIQINLNGRVSLNFKDPEAVRALTCTLLREDFG 97
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV---KGFDIGTGANCIYP 131
L+ IP +L PTVP R NYIHW+EDL+ ++ DK +G DIGTGA+CIYP
Sbjct: 98 LSIDIPLERLIPTVPLRLNYIHWVEDLIG-------HQDSDKTTLRRGIDIGTGASCIYP 150
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLGA+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L +
Sbjct: 151 LLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDA 201
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+++ES + +DFC+CNPPF
Sbjct: 202 LKEESEI------------------------------------------VYDFCMCNPPF 219
Query: 252 FESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ------- 295
F + EA G+N P + G E++ GGE F+ RII DS+ LK+
Sbjct: 220 FANQLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRVSSL 279
Query: 296 ---------------------------------TFRWYTSMVGRKSNLKFLISKLRKVGV 322
+FRWY+ M+G+K +L L +LR GV
Sbjct: 280 STKEAVAMLSTPLLAEVQSYILSVFPRLFRIIISFRWYSCMLGKKCSLAPLKEELRIQGV 339
Query: 323 TIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHVAEKKNLSF-MLEGVQRQ 372
V TEF QG+T RW LAWSF PP+ RK+ P +K ++F +LE V ++
Sbjct: 340 PKVTFTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP----RKPITFVVLESVMKE 395
Query: 373 FS 374
S
Sbjct: 396 LS 397
>gi|290993172|ref|XP_002679207.1| predicted protein [Naegleria gruberi]
gi|284092823|gb|EFC46463.1| predicted protein [Naegleria gruberi]
Length = 306
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 175/354 (49%), Gaps = 76/354 (21%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
KNKY PP+FA LA+ YP F +V D ++DW++ + LT+VLL D+ L W
Sbjct: 1 KNKYLTKPPNFAQLATKYPFFAQYV----DSEGKVDWSNAESMVNLTKVLLKDDYQLEWN 56
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL 138
+P LCP V NR NYIHWI DLL I T + K+ G D+GTGA+CIYPLLG +
Sbjct: 57 LPLNHLCPPVTNRVNYIHWINDLLE--IGGNTQLDSQKIVGIDVGTGASCIYPLLGLRIY 114
Query: 139 GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES------TPSIQESLTGKSV 192
GW F+ SD+ + +LE+A+KNV+ N +++ + KVD PS++E +V
Sbjct: 115 GWKFIASDICEESLEFAKKNVEMNEFQNDIC-LVKVDKESGDILKSLIPSLKEKYGNSNV 173
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ ++ D S H F +CNPPFF
Sbjct: 174 EWVNSFD-------------------------SVH----------------FTMCNPPFF 192
Query: 253 ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL---KQTFR-----WYTSMV 304
+ EE NP C G EM+ GGE F+ ++ DS L K+TF W+TSM+
Sbjct: 193 DVDEEIKRNPNNDCRGNENEMITEGGEETFVKNMMNDSFYLIKKKETFEIFKNCWFTSML 252
Query: 305 GRKSNLKFLISKLRKVGVTI--------------VKTTEFVQGQTCRWGLAWSF 344
G+K L+ L + ++ TI TEF+QGQT RWG AW F
Sbjct: 253 GKKKTLQSLKEYVNQLNETIKLYEDQSIQNMQLTFHITEFIQGQTTRWGFAWKF 306
>gi|281207533|gb|EFA81716.1| hypothetical protein PPL_05710 [Polysphondylium pallidum PN500]
Length = 550
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 171/354 (48%), Gaps = 68/354 (19%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
R+R +H N Y NPP+F LLA YP F+ F+ + IDW D +A RELT
Sbjct: 65 RKRSRTNELMHRDNIYKNNPPNFKLLAEKYPKFDKFILNKNEKIYNIDWKDPDAVRELTI 124
Query: 67 VLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNI-----IPTTSRNGD------ 115
LL HD GL +P LCP + +R NY+ WI+D +P S +G+
Sbjct: 125 TLLDHDFGLKVNLPFDYLCPMITSRLNYLLWIKDCYDRLAEQCFPLPKDSSDGNVSSRVS 184
Query: 116 ----KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171
V+ D+GTGA+CIYPLLG L GW F+ +D+ ++E+A NV+ N
Sbjct: 185 QSRSSVRAIDVGTGASCIYPLLGTRLFGWRFLATDIDSRSIEFARSNVERN--------- 235
Query: 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231
+Q + V+ E +
Sbjct: 236 ----------QLQREIQVIQVEKE----------------------------------LI 251
Query: 232 LVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
L V+ + +++ ICNPPFFE +++ LN KT+C G E+V GGE F+ R+I+DS+
Sbjct: 252 LNNVIDEYSRYEISICNPPFFEDLKQTKLNHKTTCTGADNELVTEGGELQFVKRMIKDSL 311
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
L+ + Y++++GRK N++ +++ LR + TTE QG RW + WSFV
Sbjct: 312 ILRSNIKLYSTLLGRKKNVESVLTMLRDNNINCYTTTELAQGNCSRWVVCWSFV 365
>gi|328870337|gb|EGG18712.1| hypothetical protein DFA_04208 [Dictyostelium fasciculatum]
Length = 596
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 179/344 (52%), Gaps = 52/344 (15%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRP-RIDWTDFNATRE 63
KR+R R R +HP N Y NPP+F LA YPSF+ F+ + IDW D NA RE
Sbjct: 44 KRKRSRSNR-LMHPDNPYRFNPPNFKSLAKKYPSFDKFILNKNEKMIYNIDWKDPNAIRE 102
Query: 64 LTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGF 120
LT VLL +D L + LCPT+ R NY+ W+ D++ S I + +K+ G
Sbjct: 103 LTTVLLDNDFQLKVELSPDNLCPTLTLRLNYLLWLNDIMKSFNQTINNKDKKKEEKMFGI 162
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGA+CIYPLLG LL SF+ +D++ +LE+A++N++ N + I+++ VDN
Sbjct: 163 DIGTGASCIYPLLGVRLLNMSFLATDISTKSLEYAKRNIELNG-FEDSIQLKLVDN---- 217
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
N + G +D+ P V+
Sbjct: 218 ---------------PNQILVGVIDQ----------------------PSQQQQQVK--- 237
Query: 241 QFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
+DFC+CNPPFF+ E LNPK+SC + E+ GGE FI ++I DS+ +K Y
Sbjct: 238 SYDFCMCNPPFFD--ESKYLNPKSSCIASESELTTLGGELEFIKKMIGDSLIIKDGIMVY 295
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++M+GRK N+ +I +L++ GV T E QG RW + WSF
Sbjct: 296 STMIGRKVNVHPVIEELKRCGVDNYSTQELAQGNQSRWAICWSF 339
>gi|156368878|ref|XP_001627918.1| predicted protein [Nematostella vectensis]
gi|156214881|gb|EDO35855.1| predicted protein [Nematostella vectensis]
Length = 378
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 176/349 (50%), Gaps = 68/349 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N+Y + PP+F+ LA++YP F+ F + G I++ D A R +T L HD GL
Sbjct: 7 MHPRNRYKDTPPNFSELAAIYPEFKKFTRENSSGTVSINFKDPEALRAVTCCTLDHDFGL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
IP +L PTVP R NYI W+EDL+ S + V G DIGTGA+CIYPLLGA
Sbjct: 67 KLDIPLDRLIPTVPLRLNYILWLEDLMKS-----LGEVEEAVWGLDIGTGASCIYPLLGA 121
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
++ W+F+ +++ + AL +A++NV N + GK
Sbjct: 122 AIDNWNFIATEIDEFALGYAQRNVAQN-----------------------GMDGK----- 153
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ-FDFCICNPPFFES 254
L + SY P ++D Q FC+CNPPFF
Sbjct: 154 --------------------IKLKLVSPDSYLKKP-----LKDVTQKITFCMCNPPFFSC 188
Query: 255 MEEAGLN---------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EEA P + C G+ E V GGE F+ II DS+ +K WYT+M+G
Sbjct: 189 EEEAMFGASRTDKRPLPSSVCTGSANETVTKGGEVEFVKGIIRDSMEMKDMISWYTTMLG 248
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISP 354
+KS+L +++ L+K + V TTEF QG+T RWG+AW+F+ I SP
Sbjct: 249 KKSSLMEVMAFLKKNKIYAVTTTEFCQGKTRRWGVAWTFIKGILSIESP 297
>gi|395327305|gb|EJF59706.1| S-adenosyl-L-methionine dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 429
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 193/401 (48%), Gaps = 80/401 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y E PPDF LA YP + + + +G ID+ D + R LT +L D GL
Sbjct: 1 MHARNPYRE-PPDFQALADAYPPLQQHIIATANGS-SIDFKDEASQRRLTEAILHRDFGL 58
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDK---VKGFDIGTGANCIYPL 132
+P +LCP VPNR NYI W+ED++ ++ + R D+ V+G DIGTGA+ IYPL
Sbjct: 59 TLELPPNRLCPPVPNRLNYILWLEDIVEASSLAI--RPDDRVHPVRGLDIGTGASAIYPL 116
Query: 133 LGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LG SL W+F G+D+ + +LE+A NV++N
Sbjct: 117 LGCSLHPNWTFAGTDVDETSLEYARYNVRAN----------------------------G 148
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+QD ++ ++ GP +L+ + + +DF +CNPPF
Sbjct: 149 LQDRISV-----------------------VRADKEGP-MLLPMFQSHVNYDFVMCNPPF 184
Query: 252 FESMEEAG-------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
+ S E+ L P C G EM+ GGE AF+ R++E+S+ALK RWYTSM+
Sbjct: 185 YSSREDVAQSAAAKELGPNAVCTGADVEMITDGGETAFVGRMVEESLALKDRCRWYTSML 244
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------------PPARKI 351
G+ S+LK ++ LR V E VQGQT RW +AWSF P + I
Sbjct: 245 GKMSSLKHIVQTLRDSKVDNYAVAELVQGQTRRWIIAWSFEDVRLPDSLARLSHPGLQNI 304
Query: 352 ISPHVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGAS 392
+ K+ L + Q + D++ S+E GA+
Sbjct: 305 MPARNTLKQRLPPTADDAQLPVTVSDIICSVEGLVVDHGAA 345
>gi|72054094|ref|XP_793611.1| PREDICTED: methyltransferase-like protein 16-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 173/339 (51%), Gaps = 64/339 (18%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N+Y +N P+F LA YP F V ++ G+ +D+ D + R LT LL D GL
Sbjct: 7 MHPRNRYKDNKPNFDELAEKYPEFARHVIRNQAGKATLDFHDSESLRSLTCTLLKEDFGL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P +L PT+ R NYIHWIEDLL+S T + V G D G GA+CIYPLLGA
Sbjct: 67 EVELPLDRLIPTLSLRLNYIHWIEDLLAS-----TGHGKETVWGIDTGCGASCIYPLLGA 121
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ GW+F+ S++ +A+ +A++N+ N ++ + +++S
Sbjct: 122 QMNGWNFLASEVDALAIYYAKENITRNGLDDKITVVETLEDS------------------ 163
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF-ES 254
M E+A N Q YH F +CNPPFF S
Sbjct: 164 --------MFEQA-------LNSAPSRQPLYH----------------FTMCNPPFFGNS 192
Query: 255 MEEAGL---------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
+E G+ PK+ EM+ GGE F+ R+IE+S+ L+ WYTSM+G
Sbjct: 193 LEAQGIMTSRSMSRPEPKSVSTAAELEMISEGGEVEFVRRMIEESLRLRNQVVWYTSMLG 252
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+KS+L + +LRK + V TEF QG+T RWG+AW+F
Sbjct: 253 KKSSLALVREELRKHKIRNVTHTEFCQGRTMRWGIAWTF 291
>gi|402898244|ref|XP_003912134.1| PREDICTED: methyltransferase-like protein 16 [Papio anubis]
Length = 549
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 209/422 (49%), Gaps = 87/422 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL-KQTFRWYTSMVGRKSNLKF 312
EA G+N + P V +GG IT I+ K+ +WY+ M+G+K +L
Sbjct: 191 QLEAKGVNSRNP-RRPPHSCVNTGG----ITDIMPAGCEFEKRRLQWYSCMLGKKCSLAP 245
Query: 313 LISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHVAEKKNLS 363
L +LR GV V TEF QG+T RW LAWSF PP+ RK+ P +K ++
Sbjct: 246 LKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP----RKPIT 301
Query: 364 FMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVD 423
F+ VL S+ S +S + V +T + T LK + RV
Sbjct: 302 FV------------VLASVMKELSLRASSLGSETAEGIVAVTAWIEHILTDLKVQHKRVP 349
Query: 424 EG 425
G
Sbjct: 350 CG 351
>gi|400594312|gb|EJP62167.1| DUF890 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 706
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 184/368 (50%), Gaps = 71/368 (19%)
Query: 21 KYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIP 80
K +PPDF LA+L F V RD +D+ D A +L++ LL HD GL+ +P
Sbjct: 275 KLYNSPPDFKQLAALDADFSAVV-QGRD----LDFRDPKAVMQLSKTLLKHDFGLSLDLP 329
Query: 81 DGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGW 140
D +LCP +PNR YI W++DLL T + G K+ G DIGTGA+CIYP+LG + W
Sbjct: 330 DDRLCPPIPNRHKYILWLKDLLD---FTTYNAPGGKLVGIDIGTGASCIYPMLGCTQRPW 386
Query: 141 SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDM 200
F+ +D+ D +L WA KN++ N H+ I++ K SN D
Sbjct: 387 CFIAADIDDESLRWASKNIEQN-HLQNRIKLVK----------------------SNPD- 422
Query: 201 SGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF-------E 253
GP + + + E+ F + NPPF+ E
Sbjct: 423 ---------------------------GPIIPIDSITATEEVAFVMTNPPFYRSAAEMDE 455
Query: 254 SMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
E L P T+C G P EMV GGE AF+ RI+++S+AL+ +WYT+M+G S++ L
Sbjct: 456 RAAEKALPPLTACTGAPVEMVTDGGEVAFVGRILDESLALRGRIQWYTAMLGFLSSVAAL 515
Query: 314 ISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVAEKKNLSFMLEGVQRQ 372
+ +LR GV TEFVQG +T RW +AWSF R + P + ++ L+G
Sbjct: 516 VQRLRDNGVGNYAVTEFVQGRKTKRWAVAWSF----RAMRPPQAIARGAVAGSLKGYLPA 571
Query: 373 FSALDVLQ 380
+ + V++
Sbjct: 572 HTEMTVVE 579
>gi|74202960|dbj|BAE26189.1| unnamed protein product [Mus musculus]
Length = 523
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 170/316 (53%), Gaps = 64/316 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ + + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHIQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ T+ +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKTTLR----RGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------VYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVG 321
+K +L L +LR G
Sbjct: 251 KKCSLAPLKEELRIQG 266
>gi|297271586|ref|XP_001117412.2| PREDICTED: putative methyltransferase METT10D-like [Macaca mulatta]
Length = 654
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 170/319 (53%), Gaps = 64/319 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLG 250
Query: 306 RKSNLKFLISKLRKVGVTI 324
+K +L L +LR G I
Sbjct: 251 KKCSLAPLKEELRIQGDDI 269
>gi|170591356|ref|XP_001900436.1| Hypothetical UPF0049 protein ZK1128.2 in chromosome III, putative
[Brugia malayi]
gi|158592048|gb|EDP30650.1| Hypothetical UPF0049 protein ZK1128.2 in chromosome III, putative
[Brugia malayi]
Length = 483
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 178/378 (47%), Gaps = 88/378 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + PPDF+LLA + F + +G+ ++++ D NA R L R LLL D GL
Sbjct: 1 MHPRNPYKDKPPDFSLLADKFVEFRSHCYIGSNGKLKMNFRDTNAVRILARTLLLSDFGL 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP L P +P R NYI I+DLL +N I + V G DIGTGA+C+Y LLGA
Sbjct: 61 DVDIPXDCLAPRIPQRLNYILVIDDLLKTNGI------AEDVVGIDIGTGASCVYALLGA 114
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW F+ +D A+E A +NV+ N +SE IE+ +V
Sbjct: 115 KQFGWRFLATDADPFAVEIANRNVQKN-GMSERIEVVRV--------------------- 152
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE--QFDFCICNPPFFE 253
PAG ++ V+R +F FC+CNPPF+E
Sbjct: 153 -----------------------PAGC--------MIKDVIRSHPEVEFTFCMCNPPFYE 181
Query: 254 SMEEAGLN----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
E G N P ++ E+ +GGE AF++R+IEDS L+ T
Sbjct: 182 YDEYLGNNVLINVGSESNCTDRPAPHSATVARSNELAVTGGEVAFVSRLIEDSFVLQNTV 241
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF-----------VP 346
+ YTSMVG+KS+L L KL + T QG+T RW LAW+F
Sbjct: 242 KLYTSMVGKKSSLVELRKKLGRCLNVRSTVTTLYQGKTHRWVLAWTFEARIKLDKLAKCS 301
Query: 347 PARKIISPHVAEKKNLSF 364
P ++ P V E K SF
Sbjct: 302 PPLELYLPQVLEGKESSF 319
>gi|167526736|ref|XP_001747701.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773805|gb|EDQ87441.1| predicted protein [Monosiga brevicollis MX1]
Length = 587
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 181/356 (50%), Gaps = 52/356 (14%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDG-------------RPR---IDWTDFN 59
+HP+N+Y+ PP+FA LA P+V Y D RPR ID+ D N
Sbjct: 1 MHPRNRYARRPPNFAQLADKCAKLRPYVSYPDDSEAKEAEGHARSQHRPRRAFIDFRDTN 60
Query: 60 ATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG 119
A R LT L D L IPDG L PTVP + NY+HW+EDLL + + P DKV+
Sbjct: 61 AIRALTEATLECDFNLLTDIPDGHLIPTVPQKLNYLHWLEDLLRTLVAPP-----DKVRV 115
Query: 120 FDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
DIGTG IY +LGA L W FVG+++ A A++ + N ++E + I + ++
Sbjct: 116 VDIGTGPIAIYCVLGARLHPEWQFVGTELDPKACRHAQETIARN-QLTESVHIVSLPHA- 173
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
+ E + +G M + + + + ++ A S+ P L
Sbjct: 174 --------------RREQQCNEAGSMSDPGKAAVEQAAHIFGPALSTTTDPVEL------ 213
Query: 239 GEQFDFCICNPPFFESMEE----AGLNP--KTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
+F +CNPPF+++ E G+ P K G+ EM GGE AF+TR++E+S
Sbjct: 214 --EFAISMCNPPFYDTHESPANYTGIRPAPKVEATGSSSEMHVQGGEVAFVTRMMEESAR 271
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
L+ WYT M+G+K +L L +L +G T V + FVQG+T RW +AW+F+P A
Sbjct: 272 LRTRVGWYTVMLGKKRSLLDLRPQLTALGCTHVVESSFVQGKTHRWAVAWTFLPRA 327
>gi|353241031|emb|CCA72870.1| hypothetical protein PIIN_06806 [Piriformospora indica DSM 11827]
Length = 327
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 64/337 (18%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y E PPDF LA YP +PFV+ S+ G P I++ D + R LT LL D GL
Sbjct: 1 MHPRNPYKE-PPDFLELAQAYPELKPFVYISKKGNPSINFKDADGLRLLTLSLLHRDFGL 59
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ + +LCP +PNR NYI WI+D+L++ +SR + V+G DIGTGA+ IYPLL
Sbjct: 60 DLELSTDRLCPAIPNRLNYILWIQDILAN-----SSRPDETVRGIDIGTGASVIYPLLAC 114
Query: 136 SL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
L W FV +D+ +L AE NV N + +I +++SL +
Sbjct: 115 KLSPSWVFVATDIDTRSLMVAESNVARNGLQNRII-------------VKQSLPDGPIIS 161
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ +D S PA +DF +CNPPF+ S
Sbjct: 162 DVLLDPS----------------FPA---------------------YDFVMCNPPFYGS 184
Query: 255 MEEAG-------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
EE +P +C G EM+ GGE F+TRI+ +SV + + RW+TS++G+
Sbjct: 185 REEVDQATEDKEFDPSAACTGADFEMITPGGEGVFVTRIVNESVDVGKRCRWFTSLLGKH 244
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+++ +++ ++ + + TEF+QG T RWG+ WSF
Sbjct: 245 TSVAAVVAAIKGLKIDNYGITEFIQGNTRRWGVVWSF 281
>gi|322789996|gb|EFZ15072.1| hypothetical protein SINV_02458 [Solenopsis invicta]
Length = 504
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 164/337 (48%), Gaps = 68/337 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
IHP+NKY + PPD+ LA LYP F G+ RI++ + + LT LL HD L
Sbjct: 7 IHPRNKYKQ-PPDYKQLAILYPEFREIAKMDLTGKIRINFKERKSLHVLTETLLKHDFDL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP L P +P R NYI WIEDL+ + + DKV G DIGTGA CIY LL
Sbjct: 66 HVTIPADNLNPAIPLRLNYILWIEDLMVHSKLEM-----DKVTGIDIGTGAVCIYALLLT 120
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ +G+++ ++E A++ V+ N + +LIE+ NSE
Sbjct: 121 KIYKCQMIGTEVNKGSVEHAQECVRKN-KLQDLIEM----NSEK---------------- 159
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+ VVR+ +DF +CNPPFFES
Sbjct: 160 -----------------------------------IFKDVVREDRTYDFSLCNPPFFESE 184
Query: 256 EE------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN 309
+ L P+ + G E+ GGE F+TR+IE+SV +K + Y++M+G+K+N
Sbjct: 185 NDDFEKVAKALPPRNAPTGNDGELKIEGGEVGFVTRMIEESVEVKDRIKIYSTMIGKKAN 244
Query: 310 LKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
L L LR + + TEF QG T RWGLAWSF+P
Sbjct: 245 LVNLKRLLRSKDIKNITWTEFCQGHTTRWGLAWSFLP 281
>gi|307180237|gb|EFN68270.1| Putative methyltransferase METT10D [Camponotus floridanus]
Length = 763
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 178/365 (48%), Gaps = 63/365 (17%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
IHP+NKY + PPD+ LA LYP F G+ RI++ D + R LT LL HD L
Sbjct: 240 IHPRNKYKK-PPDYKQLAVLYPEFREIAIMDIAGKIRINFQDKKSLRVLTETLLKHDFDL 298
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP L P + R NY+ WIEDL+ + +K+ G DIGTGA CIY LL A
Sbjct: 299 HINIPPDNLNPAITLRMNYVLWIEDLMKY-----FKLDMNKITGIDIGTGAICIYALLLA 353
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ G+ +G+++ ++E+AEK + N ++ LI++ V++
Sbjct: 354 KIYGYHMIGTEVDKKSIEYAEKCIIKN-NLENLIKVVTVNSDR----------------- 395
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+ V D + +DF +CNPPFFE+
Sbjct: 396 -----------------------------------IFKDAVEDDKIYDFSMCNPPFFEND 420
Query: 256 EEAG----LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
+ L P+ + G E+ +GGE AF+TR+IE+SV L YT+M+GRK++L
Sbjct: 421 SDERIAKVLPPRNAPSGNDNELKTTGGEIAFVTRMIEESVDLGNQIMIYTTMIGRKTDLF 480
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEKKNLSFMLEGVQR 371
L +R + + TEF QG T RWGLAWSF+P +S +K+ +++ +++
Sbjct: 481 SLKKLIRSKNIKNMTWTEFCQGYTTRWGLAWSFLPENIIDLSSAPVIRKSGKSIVQSLKK 540
Query: 372 QFSAL 376
+ L
Sbjct: 541 DYKTL 545
>gi|326793798|ref|YP_004311618.1| ribosomal RNA large subunit methyltransferase F [Marinomonas
mediterranea MMB-1]
gi|326544562|gb|ADZ89782.1| Ribosomal RNA large subunit methyltransferase F [Marinomonas
mediterranea MMB-1]
Length = 336
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 178/374 (47%), Gaps = 82/374 (21%)
Query: 1 MGSKKRRRRREERPTI--HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDF 58
M K +R E T+ HP+N + DFALL +P +VF ++ G I ++D
Sbjct: 1 MKQKHSSKRTRESNTLGLHPRNPHRSRY-DFALLVDSFPELAQYVFKNQYGSETIHFSDP 59
Query: 59 NATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV 117
+A R L LL H +G+++W IP G LCP +P R++YIH + DLL+ + T R G +V
Sbjct: 60 DAVRALNSALLNHFYGISFWDIPKGFLCPPIPGRADYIHHLADLLAQSNNGTIPR-GKRV 118
Query: 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177
K D+G GANC+YP++G GW FVG D VA+ A + VK+N + + I+IR
Sbjct: 119 KALDVGVGANCVYPIVGYKEYGWQFVGVDANSVAVMAASEIVKANGSLKKAIKIR----- 173
Query: 178 ESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR 237
Q NM V V
Sbjct: 174 ---------------QQPDNMH-------------------------------VFQNVWA 187
Query: 238 DGEQFDFCICNPPFF---ESMEEA------GLNPKTSC-----------------GGTPE 271
+GE+FD +CNPPF SME+ GL + S GG
Sbjct: 188 EGERFDVTLCNPPFHTSEASMEKENTRKRNGLKARKSGQMDNQREHADTQAPLNFGGQSA 247
Query: 272 EMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFV 331
E+ C GGE FI+R+I++SVA+K W+TS+V R++NL L + L+KV V +K E
Sbjct: 248 ELWCDGGEAGFISRMIQESVAVKDQCFWFTSLVSRQANLPALRALLKKVNVQQIKEVEMA 307
Query: 332 QGQTCRWGLAWSFV 345
QGQ +AWSF+
Sbjct: 308 QGQKVSRFIAWSFL 321
>gi|383857114|ref|XP_003704051.1| PREDICTED: methyltransferase-like protein 16-like [Megachile
rotundata]
Length = 529
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 176/339 (51%), Gaps = 63/339 (18%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HPKNKY + PDF LLA LYP F G+ +ID+ + + R LT VLL HD
Sbjct: 4 RKFMHPKNKYKK-VPDFKLLALLYPEFRNVANIDLTGKVKIDFKNEDCLRVLTEVLLKHD 62
Query: 73 HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
L IP +L PT+P R NYI WIEDL+ ++ + ++V G DIGTG+ IYPL
Sbjct: 63 FNLEVKIPPKKLIPTLPLRLNYILWIEDLMKH----SSFNDMEEVVGIDIGTGSVSIYPL 118
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L A + G +G+++ + +++ A + +++N + LI+I KVD E T
Sbjct: 119 LFAKMYGNQMIGTEVDETSIQTAIQQIENN-KLQHLIKILKVD--EQT------------ 163
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+L GV+ + + + F +CNPPFF
Sbjct: 164 --------------------------------------ILKGVINEDKVYHFTMCNPPFF 185
Query: 253 ESMEEAG-----LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
+ E++ L P+ + G E+ GGER F+ ++I +S+ +K+ + YT+M GR+
Sbjct: 186 KIEEDSEKVQKRLPPRNAPTGNNNELTVQGGERLFVMQMINESIEIKEKVKVYTTMFGRR 245
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
SNL FL+ L++ + TEF QG T RWGLAW+F+P
Sbjct: 246 SNLLFLLKFLKRKNIENATWTEFCQGHTKRWGLAWTFLP 284
>gi|432096134|gb|ELK27002.1| Methyltransferase-like protein 16 [Myotis davidii]
Length = 558
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 180/341 (52%), Gaps = 78/341 (22%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
+++ D A R LT LL D GL+ IP +L PTVP R NYIHW+EDL+ + S
Sbjct: 43 LNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHH----DSD 98
Query: 113 NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172
+G DIGTGA+CIYPLLG++L GW F+ +++ D+ +A+KNV+ N ++S+LI++
Sbjct: 99 KSTLRRGIDIGTGASCIYPLLGSTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVV 157
Query: 173 KVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL 232
KV Q++L ++++ES +
Sbjct: 158 KVP--------QKTLLMDALKEESEI---------------------------------- 175
Query: 233 VGVVRDGEQFDFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFI 283
+DFC+CNPPFF + EA G+N P + G E++ GGE F+
Sbjct: 176 --------IYDFCMCNPPFFANQLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFV 227
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
RII DS+ LK+ RWY+ M+G+K +L L +LR GV V TEF QG+T RW LAWS
Sbjct: 228 KRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRVQGVPKVTYTEFCQGRTMRWALAWS 287
Query: 344 FV-------PPA--RKIISPHVAEKKNLSF-MLEGVQRQFS 374
F PP+ RK+ P +K ++F +LE V ++ S
Sbjct: 288 FYDDVTVPSPPSKRRKLEKP----RKPITFVVLESVMKELS 324
>gi|332027311|gb|EGI67395.1| Putative methyltransferase METT10D [Acromyrmex echinatior]
Length = 502
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 166/337 (49%), Gaps = 65/337 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
IHP+NKY + PPD+ LA LYP F GR RID+ + + LT LL HD L
Sbjct: 7 IHPRNKY-KRPPDYKQLAVLYPEFREIAIMDFTGRVRIDFKERRSLHVLTETLLKHDFDL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP L P +P R NYI W+EDL++ + + +KV G DIGTGA CIY LL A
Sbjct: 66 HVNIPADNLNPAIPLRLNYILWMEDLMTHSKLEM-----EKVTGIDIGTGAVCIYALLLA 120
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ +G+++ ++E A+K +K N + +LI+I V++
Sbjct: 121 KIYKCQVIGTEIGKESVEHAQKCIKKN-KLQDLIKIITVNSDR----------------- 162
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+ V++D +DF +CNPPFFES
Sbjct: 163 -----------------------------------IFKDVIQDNRVYDFSMCNPPFFESE 187
Query: 256 E------EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN 309
+ E L P+ + G E+ GGE F+T++IE+SV + + Y++M+G+K++
Sbjct: 188 DDGFEKVEKVLPPRNAPTGNDSELKTEGGEIGFVTKMIEESVDVGDRIKIYSTMIGKKAD 247
Query: 310 LKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
L L LR + + TEF QG T RWGLAWSF+P
Sbjct: 248 LTGLRQLLRSKNIKNMTWTEFCQGHTTRWGLAWSFLP 284
>gi|403283570|ref|XP_003933190.1| PREDICTED: methyltransferase-like protein 16 [Saimiri boliviensis
boliviensis]
Length = 541
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 178/341 (52%), Gaps = 78/341 (22%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
+++ D A R LT LL D GL+ IP +L PTVP R NYIHW+EDL+ S
Sbjct: 31 LNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSD 86
Query: 113 NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172
+G DIGTGA+CIYPLLGA+L GW F+ +++ D+ +A+KNV+ N ++S+LI++
Sbjct: 87 KSSLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVV 145
Query: 173 KVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL 232
KV Q++L ++++ES +
Sbjct: 146 KVP--------QKTLLMDALKEESEI---------------------------------- 163
Query: 233 VGVVRDGEQFDFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFI 283
+DFC+CNPPFF + EA G+N P + G E++ GGE F+
Sbjct: 164 --------IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 215
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
RII DS+ LK+ RWY+ M+G+K +L L +LR GV V TEF QG+T RW LAWS
Sbjct: 216 KRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWS 275
Query: 344 FV-------PPA--RKIISPHVAEKKNLSF-MLEGVQRQFS 374
F PP+ RK+ P +K ++F +L V ++ S
Sbjct: 276 FYDDVTVPSPPSKRRKLEKP----RKPITFVVLASVMKELS 312
>gi|373957993|ref|ZP_09617953.1| Ribosomal RNA large subunit methyltransferase F [Mucilaginibacter
paludis DSM 18603]
gi|373894593|gb|EHQ30490.1| Ribosomal RNA large subunit methyltransferase F [Mucilaginibacter
paludis DSM 18603]
Length = 323
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 75/357 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
+ R +E+ +HP+NK+ DF L +V ++ ID++D +A + L R
Sbjct: 6 KARPDEKSGLHPRNKHRFRY-DFEQLIQSCVGLARYVSPNQYQDLSIDFSDPDAVKMLNR 64
Query: 67 VLLLHD-HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDI 122
LL H H +NW IP G LCP +P R++YIH++ DLL+S N+IP G+K+K DI
Sbjct: 65 ALLTHYYHIVNWDIPAGYLCPPIPGRADYIHYLADLLASCNNNVIPI----GNKIKALDI 120
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANC+YPL+G GWSFVG+D+ VA+ A+K + +N H++E IE+R N+
Sbjct: 121 GVGANCVYPLIGHREYGWSFVGADVDPVAIRSAKKILTANAHLAEKIELRLQTNAAD--- 177
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ G+++ GE F
Sbjct: 178 ------------------------------------------------IYTGIIKPGEIF 189
Query: 243 DFCICNPPFFESMEEAG------LN---------PKTSCGGTPEEMVCSGGERAFITRII 287
D ICNPPF S++EA LN P + GG E+ GGE AF+ R++
Sbjct: 190 DVTICNPPFHTSLQEAAQGTRRKLNNLGKPASQKPVLNFGGQNAELWYPGGEEAFVRRMV 249
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
E S + + WYT+++ +K NL + L++VG V+T QGQ ++W+F
Sbjct: 250 EQSAQMPRQCLWYTTLISKKDNLPAIYRVLKRVGAFDVRTINMAQGQKVSRIVSWTF 306
>gi|324503326|gb|ADY41448.1| Methyltransferase [Ascaris suum]
Length = 491
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 170/359 (47%), Gaps = 77/359 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + PPDF LA Y F F + +G+ +++ +A R L R +L +D GL
Sbjct: 7 MHPRNPYKDKPPDFNELAEKYSEFRSHCFVAPNGKLSLNFRSTDAVRSLARAMLHNDFGL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ +P L P VP R NY+ +I+DLL+ N I T V G DIGTGA+CIY LLG
Sbjct: 67 DVELPSDCLVPRVPQRLNYVLFIDDLLTMNGIDT------DVLGIDIGTGASCIYALLGT 120
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW FV ++ + A + A NV++N + +LIE+ KV I V+
Sbjct: 121 KQCGWRFVATESDEFAAQVASNNVRNNG-LGKLIEVIKVQEDRVIKDI--------VRSH 171
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE-- 253
SN E F FC+CNPPF+E
Sbjct: 172 SN------------------------------------------EHFTFCMCNPPFYEED 189
Query: 254 ------------SMEEAGLN------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
+ME + P+++ G E+ SGGE F+ R+IEDS+ L+
Sbjct: 190 EAETKFVHLDGDAMENKCYDVTRRSAPRSATVGRKNELSVSGGEVGFVGRLIEDSLVLQN 249
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISP 354
+ ++YTSMVG+K++L L +L+ + QG+T RW L WSF P + ++P
Sbjct: 250 SVKFYTSMVGKKASLNELTKRLKDCANAHYAISTLSQGRTQRWVLTWSFDPDLKLSVAP 308
>gi|110590476|pdb|2H00|A Chain A, Human Methyltransferase 10 Domain Containing Protein
gi|110590477|pdb|2H00|B Chain B, Human Methyltransferase 10 Domain Containing Protein
gi|110590478|pdb|2H00|C Chain C, Human Methyltransferase 10 Domain Containing Protein
Length = 254
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 162/305 (53%), Gaps = 64/305 (20%)
Query: 49 GRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIP 108
GR +++ D A R LT LL D GL+ IP +L PTVP R NYIHW+EDL+
Sbjct: 3 GRVSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ--- 59
Query: 109 TTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168
S +G DIGTGA+CIYPLLGA+L GW F+ +++ D+ +A+KNV+ N ++S+L
Sbjct: 60 -DSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDL 117
Query: 169 IEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228
I++ KV Q++L ++++ES +
Sbjct: 118 IKVVKVP--------QKTLLMDALKEESEI------------------------------ 139
Query: 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGE 279
+DFC+CNPPFF + EA G+N P + G E++ GGE
Sbjct: 140 ------------IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGE 187
Query: 280 RAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWG 339
F+ RII DS+ LK+ RWY+ M+G+K +L L +LR GV V TEF QG+T RW
Sbjct: 188 LEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWA 247
Query: 340 LAWSF 344
LAWSF
Sbjct: 248 LAWSF 252
>gi|350590735|ref|XP_003131886.3| PREDICTED: methyltransferase like 16 [Sus scrofa]
Length = 515
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 182/370 (49%), Gaps = 106/370 (28%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ + S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHH----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLI 314
EA + +WY+ M+G+K +L L
Sbjct: 191 QLEAKV-------------------------------------KWYSCMLGKKCSLAPLK 213
Query: 315 SKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPA--RKIISPHVAEKKNLSF- 364
+LR GV V TEF QG+T RW LAWSF PP+ RK+ P +K ++F
Sbjct: 214 EELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKP----RKPITFV 269
Query: 365 MLEGVQRQFS 374
+LE V ++ S
Sbjct: 270 VLESVMKELS 279
>gi|87121754|ref|ZP_01077641.1| hypothetical SAM-dependent methyltransferase [Marinomonas sp.
MED121]
gi|86163005|gb|EAQ64283.1| hypothetical SAM-dependent methyltransferase [Marinomonas sp.
MED121]
Length = 327
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 172/365 (47%), Gaps = 71/365 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+ +R R ++ +HP+N + DFALLA PF+ ++ G ID+ D +A +
Sbjct: 7 QAKRGSRNQKLELHPRNPHRARY-DFALLADSSAELAPFIRKNKFGNESIDFADADAVKA 65
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+++W IP G LCP +P R++YIH + DLLS++ R G +K DI
Sbjct: 66 LNRALLNHFYGVSFWDIPPGYLCPPIPGRADYIHHLADLLSASNQGDIPR-GKGIKALDI 124
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANC+YP++G W FVGSD+ +VA+E A V SN + I R
Sbjct: 125 GVGANCVYPIIGHREYQWHFVGSDINNVAIETARAIVMSNACLKGSIVCR---------- 174
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
SN M G+ +D E+F
Sbjct: 175 ----------LQSSNQQM-------------------------------FKGIWKDDERF 193
Query: 243 DFCICNPPFFESMEE---------AGLNPKTSC--------GGTPEEMVCSGGERAFITR 285
D +CNPPF S + GLN GG E+ C GGE FI
Sbjct: 194 DLTLCNPPFHSSNAKMQAESQRKWKGLNSDAKAPNKQGLNFGGQDNELWCDGGEERFIND 253
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+IE SVA + W+TS+V +++NL + +L++VG VKT E QGQ +AW+F+
Sbjct: 254 MIEQSVAFGERCYWFTSLVSKQANLTSIYRRLKQVGAQEVKTVEMAQGQKVSRFVAWTFL 313
Query: 346 PPARK 350
P ++
Sbjct: 314 MPDQR 318
>gi|255530375|ref|YP_003090747.1| SAM-dependent methyltransferase [Pedobacter heparinus DSM 2366]
gi|255343359|gb|ACU02685.1| rRNA (adenine-N(6)-)-methyltransferase [Pedobacter heparinus DSM
2366]
Length = 314
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 168/359 (46%), Gaps = 75/359 (20%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
EE+ +HP+NK+ +F L P PFV + G ID++D A + L + LL
Sbjct: 3 EEKTILHPRNKHRSRY-NFPELIKTLPELYPFVAVNSYGGESIDFSDPVAVKLLNKALLK 61
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
H +G+ NW IP LCP +P R++Y+H++ DLL+ N I+P G++VKG DIG GA
Sbjct: 62 HFYGIDNWDIPANYLCPPIPGRADYVHYLADLLARNNKGIVP----KGNRVKGLDIGIGA 117
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GWSFVGSD A++ A+ V +N ++ + R N +
Sbjct: 118 NCIYPIIGLREYGWSFVGSDTDQGAIKTAKAIVAANSLLTGAVSCRLQPNPKD------- 170
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G+V+ GE FDF +
Sbjct: 171 --------------------------------------------IFKGIVKPGELFDFTM 186
Query: 247 CNPPFFESMEEA---------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
CNPPF S EA G + GG E+ GGE AFI +I DS+
Sbjct: 187 CNPPFHASAAEAQSGTKRKLQNLGKHTGKETVLNFGGQQAELWYDGGELAFIRNMINDSM 246
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
A+ W++S+V + SNL F+ L+ G VKT E QGQ +AWSF+ A +
Sbjct: 247 AIANQCLWFSSLVSKSSNLSFIYKALQGAGALQVKTIEMAQGQKISRFVAWSFLTEAAQ 305
>gi|395748332|ref|XP_002826874.2| PREDICTED: LOW QUALITY PROTEIN: methyltransferase-like protein 16,
partial [Pongo abelii]
Length = 650
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 178/341 (52%), Gaps = 78/341 (22%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
+++ D A R LT LL D GL+ IP +L PTVP R NYIHW+EDL+ S
Sbjct: 88 LNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----ESD 143
Query: 113 NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172
+G DIGTGA+CIYPLLGA+L GW F+ +++ D+ +A+KNV+ N ++S+LI++
Sbjct: 144 KSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVV 202
Query: 173 KVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL 232
KV Q++L ++++ES +
Sbjct: 203 KVP--------QKTLLMDALKEESEI---------------------------------- 220
Query: 233 VGVVRDGEQFDFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFI 283
+DFC+CNPPFF + EA G+N P + G E++ GGE F+
Sbjct: 221 --------IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 272
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
RII DS+ LK+ RWY+ M+G+K +L L +LR GV V TEF QG+T RW LAWS
Sbjct: 273 KRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWS 332
Query: 344 FV-------PPA--RKIISPHVAEKKNLSF-MLEGVQRQFS 374
F PP+ RK+ P +K ++F +L V ++ S
Sbjct: 333 FYDDVTVPSPPSKRRKLEKP----RKPITFVVLASVLKELS 369
>gi|340712136|ref|XP_003394620.1| PREDICTED: LOW QUALITY PROTEIN: methyltransferase-like protein
16-like [Bombus terrestris]
Length = 536
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 173/340 (50%), Gaps = 65/340 (19%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+N Y + PDF L LYP F + G+ +ID+ R LT VLL HD
Sbjct: 27 RKFMHPRNIYKK-IPDFKKLVLLYPEFRDIAIVNLTGKIKIDFKREGTLRVLTEVLLKHD 85
Query: 73 HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
L IP +L PT+P R NYI WIEDL+ + +V G DIGTGA CIYPL
Sbjct: 86 FNLQVKIPPNKLAPTLPLRLNYILWIEDLMKH----ASFNEMKEVIGIDIGTGAVCIYPL 141
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L A + G + +++ +++ A ++VK+N ++ ++I++ KVD E K V
Sbjct: 142 LFAKMYGNQMIATEVDKTSIQTAIEHVKNN-NLEDIIKVYKVD---------ERTILKEV 191
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
E N+ YH F +CNPPFF
Sbjct: 192 IKEDNV---------------------------YH----------------FTMCNPPFF 208
Query: 253 ESMEEAG------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR 306
E +EE+ L P+ + G E+ GGERAFI ++IE+S+ +K+ + YT+M GR
Sbjct: 209 E-IEESSEKIIKRLPPRNAPTGNEVELTIQGGERAFIMQMIEESMEIKEKAKIYTTMFGR 267
Query: 307 KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
+SNL FL+ L+K G+ TEF QG T RWGLAWSF+P
Sbjct: 268 RSNLLFLLKFLKKKGIENSTWTEFCQGHTKRWGLAWSFLP 307
>gi|338213488|ref|YP_004657543.1| ribosomal RNA large subunit methyltransferase F [Runella
slithyformis DSM 19594]
gi|336307309|gb|AEI50411.1| Ribosomal RNA large subunit methyltransferase F [Runella
slithyformis DSM 19594]
Length = 322
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 173/354 (48%), Gaps = 76/354 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N + DF L P+ PFV ++ G +D+T A ++L + +L+H
Sbjct: 11 EKQGLHPRNPHRFRY-DFNALIKACPALAPFVALNKYGDESVDFTHPEAVKQLNKAILIH 69
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G++ W IP L P +P R++YIH+I DLLS + +IP G + G DIG GAN
Sbjct: 70 FYGIHHWDIPSNYLRPPIPGRADYIHYIADLLSESNEGVIPA----GKAIMGLDIGVGAN 125
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
C+YP++G GW FVGSD+ A++ A++ + +N ++ IE R
Sbjct: 126 CVYPIIGNRSYGWRFVGSDIDPKAVQNAKRILTTNTVLTPFIECR--------------- 170
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ S+SS F G+VR E+FDF +C
Sbjct: 171 --------------------LQSSASSVFK----------------GIVRPDERFDFTMC 194
Query: 248 NPPFFESMEEAG--------------LNPKTSC--GGTPEEMVCSGGERAFITRIIEDSV 291
NPPF S EEA L K S GG E+ C GGE+AFIT++IE S
Sbjct: 195 NPPFHSSAEEAAAGTQRKWQNLGRPPLAQKRSLNFGGQHAELWCEGGEKAFITQMIEQSA 254
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W+TS+V +K+ L FL L+KV V +T E QGQ +AW+F+
Sbjct: 255 QIASQCFWFTSLVSKKNTLPFLYKALKKVKVFDTRTIEMAQGQKVSRMVAWTFL 308
>gi|405952123|gb|EKC19969.1| Putative methyltransferase METT10D [Crassostrea gigas]
Length = 527
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 163/339 (48%), Gaps = 69/339 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + P+F LA YP F VF G+ +D+ + R+L LL D L
Sbjct: 7 MHPRNLYKDKAPNFKTLAEKYPDFAKCVFKDLKGKCHLDYKSPTSLRQLAIALLKEDFDL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P +L PT+P R NYI WIED+L T G KG DIGTGA C+YPLLG
Sbjct: 67 EVEMPLNRLIPTIPLRLNYILWIEDILKD----LTDVRG---KGIDIGTGATCVYPLLGC 119
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
W F+ S++ + AEKN++ N ++ E I+++KV +GK+ E
Sbjct: 120 KKNKWEFLASEVDETNFTIAEKNIQKN-NMQEKIKVKKV-------------SGKTALLE 165
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+ G+ DE FDFC+CNPPFF
Sbjct: 166 L---LEGNSDE-----------------------------------FDFCMCNPPFFADH 187
Query: 256 EEAGLNPKTSCGGTPE----------EMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
+A + PE E + GGE FI +II +SV L+ + +TSM+G
Sbjct: 188 MDAQAIMSSRSDERPEPSSINTASVGESITEGGEAEFIKKIIVESVDLQGRIKIFTSMIG 247
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+K+N+ + +LR + +TTEF QG+T RWG+AW+F
Sbjct: 248 KKTNIPLVKKELRDHKIPNYQTTEFCQGKTMRWGIAWTF 286
>gi|152998058|ref|YP_001342893.1| putative SAM-dependent methyltransferase [Marinomonas sp. MWYL1]
gi|205829563|sp|A6W2M9.1|RLMF_MARMS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|150838982|gb|ABR72958.1| protein of unknown function DUF890 [Marinomonas sp. MWYL1]
Length = 327
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 175/364 (48%), Gaps = 73/364 (20%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
+ SK + +R + +HP+N + DFALLA P F+ ++ G +D+ + NA
Sbjct: 3 LKSKNTKSKRTNKLELHPRNPHRARY-DFALLADSCPELSGFIQLNQYGNESVDFANPNA 61
Query: 61 TRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG 119
+ L R LL H +G+ +W IP G LCP +P R++YIH++ DLL+++ + R G VK
Sbjct: 62 VKTLNRALLNHFYGVAFWDIPPGYLCPPIPGRADYIHYLADLLAASNLGVIPR-GKGVKV 120
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
D+G GANC+YP++G GW FVGSD+ VA+ + VKSNP + I R
Sbjct: 121 LDVGVGANCVYPIIGHQEYGWQFVGSDVNPVAVATCDTIVKSNPCLKGAISAR------- 173
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
+ S+ F+ GV ++
Sbjct: 174 ----------------------------LQTQSAKLFD----------------GVWKEK 189
Query: 240 EQFDFCICNPPFFESMEEAGLN------------------PKTSCGGTPEEMVCSGGERA 281
++FD +CNPPF S E A ++ P + GGT E+ C GGE
Sbjct: 190 DRFDLTLCNPPFHTS-ESAMIDESQRKWRGVKGKKTTTQKPVLNFGGTAAELWCDGGEAG 248
Query: 282 FITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341
F++R++++SV W+TS+V R+ NL + L+ VG VKT E QGQ +A
Sbjct: 249 FVSRMVKESVQYADRCFWFTSLVARQGNLDAIYRTLKDVGARQVKTIEMAQGQKISRFVA 308
Query: 342 WSFV 345
WSF+
Sbjct: 309 WSFL 312
>gi|389645578|ref|XP_003720421.1| hypothetical protein MGG_09820 [Magnaporthe oryzae 70-15]
gi|351640190|gb|EHA48054.1| hypothetical protein MGG_09820 [Magnaporthe oryzae 70-15]
Length = 496
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 173/327 (52%), Gaps = 68/327 (20%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF + + P F+ + R+G+ +D++D A +LT+ L GL +PD +LCP
Sbjct: 78 DFREMGTQDPDFKAVL--KRNGQ--LDFSDPKAVMQLTKSSLKLHFGLEMELPDDRLCPP 133
Query: 88 VPNRSNYIHWIEDLL-SSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
VPNR NYI W++DLL SS+ P G K+ G DIGTGA+CIYPLLG + W F+ +D
Sbjct: 134 VPNRHNYILWLKDLLDSSSYCPP----GGKLTGLDIGTGASCIYPLLGCTQRPWEFIATD 189
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +L +AEKN+ +N ++S+ I++ + ++P I DE +D
Sbjct: 190 VDKKSLSYAEKNIAAN-NLSDRIKLVPRPDPATSPLIP--------LDELKIDA------ 234
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE-------AG 259
DF + NPPF+ES +E
Sbjct: 235 -----------------------------------IDFVMTNPPFYESEKELLTLAAQKE 259
Query: 260 LNPKTSCGGTPEEMV-CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLR 318
L P T+C G P EMV +GGE F+TRI+++S+ L++ RWYTSM+G+ S+L+ L+ LR
Sbjct: 260 LPPSTACTGAPVEMVHLAGGEVGFVTRILDESLVLRERVRWYTSMLGKLSSLEVLVETLR 319
Query: 319 KVGVTIVKTTEFVQG-QTCRWGLAWSF 344
GVT TEFVQG +T RW + WSF
Sbjct: 320 DRGVTNYAVTEFVQGTKTKRWAVGWSF 346
>gi|91095139|ref|XP_973052.1| PREDICTED: similar to methyltransferase 10 domain containing
[Tribolium castaneum]
gi|270015731|gb|EFA12179.1| hypothetical protein TcasGA2_TC002332 [Tribolium castaneum]
Length = 483
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 160/339 (47%), Gaps = 69/339 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + PP+F LA YP F + G+ ID+ + A R LT LL D L
Sbjct: 7 MHPRNIYKQ-PPNFKQLALDYPEFRKYATQDVSGKVTIDFKNVGALRALTCTLLKKDFDL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
N IP G+L PT+P R NYI W+EDLL+ P +R G DIGTGA+CIYPLL A
Sbjct: 66 NIEIPPGKLIPTIPLRLNYILWLEDLLNLAGGPPQAR------GIDIGTGASCIYPLLAA 119
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
WS V +++ +L+ A NV +N H+ L+ + + E G
Sbjct: 120 RKSQWSMVATEIDPESLKCATANVANN-HLEGLVTVMGAQKDSLLAQVLEKFPG------ 172
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
FDFC+CNPPFF +
Sbjct: 173 ---------------------------------------------DFDFCMCNPPFFSTP 187
Query: 256 EE----------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
E +PK + + +E+V +GGE ++I+R++E+S A YTSMVG
Sbjct: 188 LELHPFFKARKVKRPHPKNAFCASVDEVVATGGEVSYISRLVEESKAWGPRVAIYTSMVG 247
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
KS+L L +R+VG K TEF QG T RWGLAW+F
Sbjct: 248 HKSSLPPLKKLIREVGAVSFKQTEFCQGHTTRWGLAWTF 286
>gi|380030407|ref|XP_003698840.1| PREDICTED: LOW QUALITY PROTEIN: methyltransferase-like protein
16-like [Apis florea]
Length = 516
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 175/340 (51%), Gaps = 65/340 (19%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+NKY + PDF LA LYP F G+ +ID+ + + R LT VLL HD
Sbjct: 4 RKFMHPRNKYKK-IPDFKELALLYPEFRDIANIDLTGKIKIDFKNEESLRVLTEVLLKHD 62
Query: 73 HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
L IP +L PT+P R NYI WIEDL+ + +V G DIGTGA CIYPL
Sbjct: 63 FNLEVKIPPNKLVPTLPLRINYILWIEDLMKY----ISFNEMQEVIGIDIGTGAVCIYPL 118
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L A + G +G+++ + +++ A +++++N + +I++ KVD E K +
Sbjct: 119 LFAKMYGNQMIGTEVDETSIQTAIQHIENNK-LHHIIKVFKVD---------EGTILKDI 168
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
E+N+ YH F ICNPPFF
Sbjct: 169 MKENNI---------------------------YH----------------FTICNPPFF 185
Query: 253 ESMEEAG------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR 306
E +EE L P+ + G E+ GGERAFIT++IE+S+ +K+ + YT+M G+
Sbjct: 186 E-IEELSEKIIKRLPPRNASTGNKVELTVQGGERAFITQMIEESIKIKEKIKIYTTMCGK 244
Query: 307 KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
+ NL L+ L++ + V TEF QG T RWGLAWSF+P
Sbjct: 245 RXNLLCLLKFLKQKNIENVTWTEFCQGHTKRWGLAWSFLP 284
>gi|332376019|gb|AEE63150.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 180/374 (48%), Gaps = 81/374 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y +NPP+F LA +P F+ V G+ + D+ D A R L+ LLL D L
Sbjct: 7 MHPRNIY-KNPPNFKQLAVEFPEFKRHVRIDITGKVQFDFKDPEALRALSHTLLLKDFHL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP +L PT+P R NYI WIEDLL + I D V+G DIGTGA+C+YPL+ A
Sbjct: 66 DVCIPVNKLVPTIPLRLNYILWIEDLL--DFIGRI----DHVEGIDIGTGASCVYPLIAA 119
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSN--PHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
WS + ++ + E A++N+ SN H+ +++++ K
Sbjct: 120 QKNQWSMLATEADTGSFEQAKQNIVSNGFQHLVKVVQVSK-------------------- 159
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
++ ++G +D + + +DFC+CNPPFF
Sbjct: 160 ---DIFLAGAVDAD--------------------------------KVYDFCMCNPPFFA 184
Query: 254 SMEEAG----------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303
S +E +PK + + E V GGE FI ++I +S LK + YT+M
Sbjct: 185 STQELHPFFKARTQNRPHPKNAFVASVHETVAKGGEVDFIQKMIAESTQLKTQIKLYTTM 244
Query: 304 VGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------PPARKIISPHV 356
VG+KS+L L LR+ V K EF QG T RWGLAW+++ KI +
Sbjct: 245 VGQKSSLPALKKCLREAKVHSFKVAEFCQGNTTRWGLAWTYLNHDLRKASEEAKIATKSY 304
Query: 357 AEKKNLSFMLEGVQ 370
++ L + LEG Q
Sbjct: 305 KQRGPLLYDLEGEQ 318
>gi|409395029|ref|ZP_11246152.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. Chol1]
gi|409395991|ref|ZP_11247016.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. Chol1]
gi|409119490|gb|EKM95873.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. Chol1]
gi|409120322|gb|EKM96672.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. Chol1]
Length = 330
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 172/354 (48%), Gaps = 72/354 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ +RP +HP+N++S DF L + P+ FV + G+ ID+ D A + R LL
Sbjct: 13 KPDRPLLHPRNRHSGRY-DFPALIAGCPALADFVIVNPYGKQSIDFADPAAVKVFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
+G+ W IP G LCP VP R++Y+H + DLL+++ + R G +++ DIGTGANC
Sbjct: 72 KQFYGIEHWDIPAGYLCPPVPGRADYLHGLADLLAADNAGSIPR-GRQIRALDIGTGANC 130
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GSD+ VAL A+ V +N +S+ IE+R+ +
Sbjct: 131 IYPLIGHCEYGWRFTGSDIDSVALNAAQAIVTAN-GLSDAIELRRQSDRRH--------- 180
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G+++ E+FD +CN
Sbjct: 181 ------------------------------------------IFHGLLQADERFDLSLCN 198
Query: 249 PPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSV 291
PPF S EA L+PK GG E+ C GGE AFI R+ E+SV
Sbjct: 199 PPFHASASEATAGSQRKWRNLGKLDPKRKLPVLNFGGQAAELWCEGGEAAFIARLAEESV 258
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ Q W++++V + N+ L ++LR++G V+T + QGQ +AW+F+
Sbjct: 259 KVSQQICWFSTLVSKGGNVAPLQARLRRLGAREVQTLDMAQGQKRSRFVAWTFL 312
>gi|350398930|ref|XP_003485354.1| PREDICTED: methyltransferase-like protein 16-like [Bombus
impatiens]
Length = 536
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 172/339 (50%), Gaps = 63/339 (18%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+N Y + PDF L LYP F + G+ +ID+ R LT VLL HD
Sbjct: 27 RKFMHPRNIYKK-IPDFKKLVLLYPEFRDIAIVNLTGKIKIDFKREGTLRVLTEVLLKHD 85
Query: 73 HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
L IP +L PT+P R NYI WIEDL+ + +V G DIGTGA CIYPL
Sbjct: 86 FNLQVKIPPNKLVPTLPLRLNYILWIEDLMKH----ASFNEMKEVIGIDIGTGAVCIYPL 141
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L A + G + +++ +++ A ++VK+N ++ ++I++ KVD E K +
Sbjct: 142 LFAKMYGNQMIATEVDKTSIQTAIEHVKNN-NLEDIIKVYKVD---------ERTILKEI 191
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
E N+ YH F +CNPPFF
Sbjct: 192 IKEDNV---------------------------YH----------------FTMCNPPFF 208
Query: 253 E---SMEE--AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
E S E+ L P+ + G E+ GGERAFI ++IE+S+ +K+ + YT+M GR+
Sbjct: 209 EIEGSSEKIIKQLPPRNAPTGNEVELTVQGGERAFIIQMIEESMEIKEKAKIYTTMFGRR 268
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
SNL FL+ L+K G+ TEF QG T RWGLAWSF+P
Sbjct: 269 SNLLFLLKFLKKKGIENSTWTEFCQGHTKRWGLAWSFLP 307
>gi|419954060|ref|ZP_14470201.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri TS44]
gi|387969149|gb|EIK53433.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri TS44]
Length = 341
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 173/354 (48%), Gaps = 72/354 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ +RP +HP+N++S DF L + P+ FV + G+ ID+ D A + R LL
Sbjct: 24 KPDRPLLHPRNRHSGRY-DFPALIAGCPALADFVIVNPYGKQSIDFADPAAVKVFNRALL 82
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
+G+ W IP G LCP VP R++Y+H + DLL+++ + R G ++ DIGTGANC
Sbjct: 83 KQFYGIEHWDIPAGYLCPPVPGRADYLHGLADLLAADNAGSIPR-GRQIHALDIGTGANC 141
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GSD+ VAL A+ V +N +S+ IE+R+
Sbjct: 142 IYPLIGHCEYGWRFTGSDIDTVALNAAQTIVAAN-RLSDAIELRR--------------- 185
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+P F G+++ ++FD +CN
Sbjct: 186 --------------------QPDRRHIFQ----------------GLLQADQRFDLSLCN 209
Query: 249 PPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSV 291
PPF S+ EA L+PK GG E+ C GGE AFI R+ E+SV
Sbjct: 210 PPFHASVSEATAGSQRKWRNLGKLDPKRKLPMLNFGGQAAELWCEGGEAAFIARLAEESV 269
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
A+ Q W++++V + N+ L ++LR++G V T + QGQ +AW+F+
Sbjct: 270 AVSQQICWFSTLVSKGGNVAPLQARLRRLGAREVGTLDMAQGQKRSRFVAWTFL 323
>gi|429085631|ref|ZP_19148601.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
condimenti 1330]
gi|426545239|emb|CCJ74642.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
condimenti 1330]
Length = 309
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 163/355 (45%), Gaps = 75/355 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N++ DF L P+ +V S G P ID+ D NA + L + LL H
Sbjct: 4 KPGLHPRNRHHSRY-DFEALTQSCPALGAYVRQSPAGEPTIDFADPNAVKTLNQALLAHF 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANC 128
+G+ W IPDG LCP VP R++Y+H + DLL+ IPT + DIG GANC
Sbjct: 63 YGVQQWTIPDGFLCPPVPGRADYVHHLADLLAESNGGAIPT------QASVLDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYP++G GW F GSD ++ A+ A +++NP ++ I +R+ + TP
Sbjct: 117 IYPIIGQHEYGWRFTGSDTSEEAIRSASAIIEANPGLNRAIRLRR----QKTPGA----- 167
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G+V E +D +CN
Sbjct: 168 ------------------------------------------IFNGIVHKNESYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S E A GL P GG EE+ C GGE FIT++I +S A +
Sbjct: 186 PPFHDSAEAASAGNARKRRNLGLAPDAGLNFGGQQEELWCEGGEVGFITQMIAESKAFAR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T++V + NL L L + G V E QGQ +AWSF+ A++
Sbjct: 246 QVLWFTTLVSKGDNLPLLYRALEQAGAVKVVKKEMAQGQKQSRFIAWSFMDTAQR 300
>gi|424066293|ref|ZP_17803759.1| hypothetical protein Pav013_1083 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|408002440|gb|EKG42696.1| hypothetical protein Pav013_1083 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 329
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 173/361 (47%), Gaps = 78/361 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DFA L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRH-QGQYDFAKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A VK+N +S+ I +R+ N +
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKAN-GLSKAISVRQQGNRKQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 189 --------------------------------------------ILLGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S+EEA P + GG +E+ C GGE F+T++I++
Sbjct: 205 CNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCDGGEIGFVTQLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K GV VK E QGQ +AW+F+ A+
Sbjct: 265 SALLPSQVAWFSTLVSKASNLPPIQSALKKAGVLEVKVVEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 K 350
+
Sbjct: 325 R 325
>gi|302407075|ref|XP_003001373.1| DUF890 domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261359880|gb|EEY22308.1| DUF890 domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 336
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 173/353 (49%), Gaps = 75/353 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFAL----LASLYPSFEPFVFYSRDGRPRIDWTDFNATR 62
RR REERP P D L L F R G +D+ + A
Sbjct: 33 RRHREERPA--PGVDADTYFRDLYLSELDFRQLSREDSEFGLLLRSGN--LDFNNPAAVM 88
Query: 63 ELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
+LT+ LL D+GL +PD +LCP VP R NYI W+++L+ + + + G K+ G DI
Sbjct: 89 QLTKTLLKIDYGLKIELPDDRLCPPVPVRHNYILWLKELIDGS---SYAERGRKMTGLDI 145
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTD-VALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
GTGA+CIYPLL WSF+ + D +L +A+KNV+ N H+ I+I + S P
Sbjct: 146 GTGASCIYPLLACQQRNWSFIATGNVDPKSLSFAKKNVELN-HVQNRIQI--ISRQSSDP 202
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
I A P++
Sbjct: 203 LI-----------------------PAHPAA----------------------------- 210
Query: 242 FDFCICNPPFFES-------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
DF + NPPF+ES ++ P ++C G P EMV GGE AF+TR+IE+S+AL+
Sbjct: 211 IDFTMTNPPFYESDADLLASAKQKSRPPLSACTGAPVEMVTPGGEVAFVTRLIEESLALR 270
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP 346
+WYTSM+G++S+L+ ++ KLR+ G+ TEFVQG +T RW LAWSF P
Sbjct: 271 DAIQWYTSMLGKQSSLETIVEKLREHGINNYAITEFVQGNKTRRWALAWSFAP 323
>gi|193650187|ref|XP_001948397.1| PREDICTED: putative methyltransferase METT10D-like [Acyrthosiphon
pisum]
Length = 442
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 161/335 (48%), Gaps = 61/335 (18%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y PP F LA+ YP F + +G+ D+ + + R LT +LL D L
Sbjct: 7 MHPRNIY-RTPPAFKELAAKYPEFNKYASVGLNGKITFDFKNQDGLRLLTTILLKKDFDL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ +P G+L PTVP R NY+ WIEDL + N N K+KG DIGTG++CIYPLL A
Sbjct: 66 DVDLPVGRLVPTVPLRLNYLLWIEDLFNLNY-----DNTKKIKGIDIGTGSSCIYPLLAA 120
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
WS VG+D+ +++ A KNV+ N ++ LI++ +V E
Sbjct: 121 KQFQWSMVGTDINKESIKNAIKNVEKN-NLQHLIQVLEVSEWERL--------------- 164
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE-S 254
LP E +DFC+CNPPF S
Sbjct: 165 ----------------------LPVAVD----------------EHYDFCMCNPPFHSLS 186
Query: 255 MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLI 314
+ + S G EM GGE FI ++I +S L+ + YT+MVG KS+L L
Sbjct: 187 KINSSDDEADSAVGITSEMYTIGGEVDFIKKMINESETLQNSISIYTTMVGYKSSLDPLK 246
Query: 315 SKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
++L+ +G + F QG+ RWGLAW+F P +
Sbjct: 247 NELKAIGACTIAEAGFFQGRNARWGLAWTFQPDIK 281
>gi|440720160|ref|ZP_20900579.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae BRIP34876]
gi|440726287|ref|ZP_20906541.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae BRIP34881]
gi|443645256|ref|ZP_21129106.1| 23S rRNA m(6)A-1618 methyltransferase [Pseudomonas syringae pv.
syringae B64]
gi|440366196|gb|ELQ03280.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae BRIP34876]
gi|440366448|gb|ELQ03527.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae BRIP34881]
gi|443285273|gb|ELS44278.1| 23S rRNA m(6)A-1618 methyltransferase [Pseudomonas syringae pv.
syringae B64]
Length = 328
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 173/360 (48%), Gaps = 78/360 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DFA L P FV + G+ ID+ + A R R LL
Sbjct: 23 EKATLHPRNRH-QGQYDFAKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLKA 81
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGAN
Sbjct: 82 FYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGAN 137
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLG S GW FVGSD+ A+ A VK+N +S+ I +R+ N +
Sbjct: 138 CIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKAN-GLSKAISVRQQGNRKQ-------- 188
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L+G++ E+F +C
Sbjct: 189 -------------------------------------------ILLGLLDSSERFHVSLC 205
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S+EEA P + GG +E+ C GGE F+T++I++S
Sbjct: 206 NPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCDGGEIGFVTQLIQES 265
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W++++V + SNL + S L+K GV VK E QGQ +AW+F+ A++
Sbjct: 266 ALLPSQVAWFSTLVSKASNLPPIQSALKKAGVLEVKVVEMGQGQKQSRFVAWTFLDKAQR 325
>gi|424070938|ref|ZP_17808366.1| hypothetical protein Pav037_1051 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999680|gb|EKG40058.1| hypothetical protein Pav037_1051 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 329
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 80/366 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DFA L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRH-QGQYDFAKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A VK+N +S+ I +R+ N +
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKAN-GLSKAISVRQQGNRKQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 189 --------------------------------------------ILLGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S+EEA P + GG +E+ C GGE F+T++I++
Sbjct: 205 CNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCDGGEIGFVTQLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A+
Sbjct: 265 SALLPSQVAWFSTLVSKASNLPPIQSALKKAGALEVKVVEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 KIISPH 355
+ +PH
Sbjct: 325 R--TPH 328
>gi|346323025|gb|EGX92623.1| S-adenosyl-L-methionine dependent methyltransferase, predicted
[Cordyceps militaris CM01]
Length = 463
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 168/345 (48%), Gaps = 71/345 (20%)
Query: 11 EERPTIHPKNKYS---ENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
EE H ++ NPPDF +A+L F V RD +D+ D A +L++
Sbjct: 20 EEETQQHKDERFRTLYSNPPDFKQIAALDADFAAVV-KGRD----LDFKDPKAVLQLSKT 74
Query: 68 LLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
LL D GL+ +P +LCP +PNR NYI W++DLL S T G ++ G DIGTGA+
Sbjct: 75 LLKLDFGLSLDLPSNRLCPPIPNRHNYILWLKDLLDST---TYDAPGGRLVGIDIGTGAS 131
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYP+LG + W F+ +D+ D +L WA+KNV+ N + + +R N P
Sbjct: 132 CIYPMLGCTQRPWYFIAADIDDDSLSWAKKNVEQNDLQTRIQLVRSDPNGPIIPI----- 186
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
A P+ +F +
Sbjct: 187 -------------------SAAPTDDVAF----------------------------VMT 199
Query: 248 NPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
NPPF++S EE L P+T+C G P EMV GGE AF+ RI+++S+ L+ +WY
Sbjct: 200 NPPFYKSAEELDERAAAKSLPPRTACTGAPVEMVTDGGEVAFVGRILDESLVLRGRVQWY 259
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
T+M+G S++ L+ +LR + TE VQG +T RW +AWSF
Sbjct: 260 TAMLGFLSSVTALVHRLRAHDIGNYAVTELVQGKKTRRWVVAWSF 304
>gi|392560588|gb|EIW53771.1| hypothetical protein TRAVEDRAFT_60998 [Trametes versicolor
FP-101664 SS1]
Length = 452
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 165/338 (48%), Gaps = 61/338 (18%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y ++PPDF LA +P+ +P + + G ID+ D A R LT +L D GL
Sbjct: 1 MHARNPY-QSPPDFLALADAHPALKPHIIRTAKGA-TIDFKDDAAQRALTEAILSRDFGL 58
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P G+LCP V R NYI W+ED+L++ + V+G D+GTGA+ IYPLLG
Sbjct: 59 RVVLPPGRLCPPVTYRLNYILWLEDVLAAVALALGEDPDRPVRGIDVGTGASAIYPLLGC 118
Query: 136 -SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ WSFV +++ ++L A +NV++N E SI+E+
Sbjct: 119 RTRPNWSFVATEIDALSLRSARENVRAN-------------ALEGRISIREA-------- 157
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
D +GH+ S + + DF +CNPPF+ S
Sbjct: 158 ----DPAGHIFGPLFESDGAGY--------------------------DFTMCNPPFYGS 187
Query: 255 MEEAGLN-------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
EE + P C G EM+ GGE AF+ R++E+S + RW+TSM+G+
Sbjct: 188 REEVQQSAEGKEHGPNAVCTGADVEMITPGGEAAFVARMVEESTRAQDRCRWFTSMLGKL 247
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
S+L ++ LR + E VQGQT RW LAWSF
Sbjct: 248 SSLAHVVQALRDHKIENYAVAELVQGQTRRWVLAWSFA 285
>gi|260833740|ref|XP_002611870.1| hypothetical protein BRAFLDRAFT_83106 [Branchiostoma floridae]
gi|229297242|gb|EEN67879.1| hypothetical protein BRAFLDRAFT_83106 [Branchiostoma floridae]
Length = 471
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 163/319 (51%), Gaps = 66/319 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSR-DGRPRIDWTDFNATRELTRVLLLHDHG 74
+HP+NKY NPPDFA+LA YP F +V Y++ + R I++ D A R LT LL D G
Sbjct: 7 MHPRNKYKNNPPDFAVLAKKYPDFAQYVTYNKSETRGFINFKDPEAMRCLTCTLLKEDFG 66
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD--KVKGFDIGTGANCIYPL 132
L IP+ +L PT+P R NYIHWIEDLL + T GD KV G DIG GA CIYPL
Sbjct: 67 LEVEIPNDRLIPTLPLRLNYIHWIEDLLQG-MDDVTKEAGDSGKVTGIDIGAGACCIYPL 125
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
LG +L GW+F+ +++ + +A NV N + Q+++T KSV
Sbjct: 126 LGCTLNGWNFLATEVDPTSYTYAVNNVSRN-------------------NKQDNITVKSV 166
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ + + L + D FDFC+CNPPF+
Sbjct: 167 KRDEGL---------------------------------LKFLNEDESYFDFCMCNPPFY 193
Query: 253 ES-MEEAGLNPK---------TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
+ +E GL P + + E V SGGE ++RII +S+ L+Q +YTS
Sbjct: 194 ANDLEAQGLLPDRGSERPLPSSISTASEAERVASGGEVGHVSRIILESLQLQQRIGFYTS 253
Query: 303 MVGRKSNLKFLISKLRKVG 321
M+G+KS+LK L L++ G
Sbjct: 254 MLGKKSSLKPLKEMLKENG 272
>gi|328784021|ref|XP_624889.3| PREDICTED: putative methyltransferase METT10D-like [Apis mellifera]
Length = 515
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 176/339 (51%), Gaps = 65/339 (19%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+NKY + PDF LA LYP F G+ +ID+ + + R LT VLL HD
Sbjct: 4 RKFMHPRNKYKK-IPDFNELALLYPEFRDIANIDLTGKIKIDFKNEESLRVLTEVLLKHD 62
Query: 73 HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
L IP +L PT+P R NYI WIEDL+ + +V G DIGTGA CIYPL
Sbjct: 63 FNLEVKIPPNKLVPTLPLRINYILWIEDLMKY----ISFNEMQEVIGIDIGTGAVCIYPL 118
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L A + G +G+++ + +++ A +++++N + +I++ KV+ E K +
Sbjct: 119 LFAKMYGNQMIGTEVDETSIQTAIQHIENNK-LHHIIKVFKVN---------EGTILKGI 168
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
E+N+ YH F ICNPPFF
Sbjct: 169 IKENNI---------------------------YH----------------FTICNPPFF 185
Query: 253 ESMEEAG------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR 306
E +EE L P+ + G E+ GGERAFIT++I++S+ +K+ + YT+M G+
Sbjct: 186 E-IEELSEKIIKRLPPRNASTGNKVELRVQGGERAFITQMIKESIEIKEKIKIYTTMCGK 244
Query: 307 KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
++NL FL+ L++ + V TEF QG T RWGLAWSF+
Sbjct: 245 RNNLLFLLKFLKQKNIENVTWTEFCQGHTKRWGLAWSFL 283
>gi|312069129|ref|XP_003137538.1| hypothetical protein LOAG_01952 [Loa loa]
gi|307767298|gb|EFO26532.1| hypothetical protein LOAG_01952 [Loa loa]
Length = 493
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 167/353 (47%), Gaps = 83/353 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + PPDF+LLA + F + +G+ ++++ D NA R L R LL D GL
Sbjct: 7 MHPRNPYKDKPPDFSLLADKFVEFRSHCYVGSNGKLKMNFRDTNAVRILARTLLRSDFGL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP L P +P R NYI +I+DLL +N I + G DIGTGA+C+Y LLGA
Sbjct: 67 DVNIPPDCLVPRIPQRLNYILFIDDLLKANGI------SENAVGIDIGTGASCVYALLGA 120
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW FV +D A+E A +NV+ N ++E IE+ +V
Sbjct: 121 KQFGWRFVATDADAFAVEIASQNVEKN-GMTERIEVVRV--------------------- 158
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ--FDFCICNPPFFE 253
PA ++ VVR + F FC+CNPPF+E
Sbjct: 159 -----------------------PADC--------MIKNVVRSHPETEFTFCMCNPPFYE 187
Query: 254 --SMEE--------------AGLN------PKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
EE G N P ++ E+ GGE AF++R+IEDS
Sbjct: 188 YDEFEEKFRYLRDNVLTNSGGGSNGAVRPAPHSATVARSNELAVMGGEVAFVSRLIEDSF 247
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
L+ T + YTSMVG+KS+L L KL + T QG+T RW LAW+F
Sbjct: 248 VLQNTVKLYTSMVGKKSSLVELRKKLGRCLSVRSTVTTLYQGKTHRWVLAWTF 300
>gi|410628991|ref|ZP_11339707.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola mesophila
KMM 241]
gi|410151542|dbj|GAC26476.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola mesophila
KMM 241]
Length = 317
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 163/360 (45%), Gaps = 86/360 (23%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N + P AL S YP E V ++ G+ ID++ + + L LL+H +G
Sbjct: 14 TMHPRNVHRNGYPMSALCQS-YPILEAHVVKAKSGQQSIDFSKAASVKALNAALLIHYYG 72
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIY 130
LN W IPDG LCP VP R++YIH + +LL+ ++PT G+ +KG D+G GAN IY
Sbjct: 73 LNMWDIPDGYLCPPVPGRADYIHGLAELLAKENKGVVPT----GNSIKGLDVGLGANAIY 128
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
++G+ GW FVGSD+ DVAL+ A V +NP + L+ +RK +
Sbjct: 129 SIIGSQTYGWRFVGSDIDDVALKSATALVNNNPKLKPLLAVRKQHDKAQ----------- 177
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ G+++ E F F +CNPP
Sbjct: 178 ----------------------------------------IFTGIIQPDEHFAFSLCNPP 197
Query: 251 FFESMEEAGLNP--------------------------KTSCGGTPEEMVCSGGERAFIT 284
F +S +EA K + G E+ C GGE AFI
Sbjct: 198 FHKSAQEAATGSLRKVKGLGRHKQKHNNTSKAQPITANKLNFAGQSNELWCEGGELAFIQ 257
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
R+I++SV + W+T +V + ++LK + + +R G E QGQ +AW F
Sbjct: 258 RMIKESVEYQSQVEWFTCLVSKSAHLKAIETSVRYFGAKQFMKIEMGQGQKISRFVAWKF 317
>gi|422671500|ref|ZP_16730866.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. aceris
str. M302273]
gi|330969240|gb|EGH69306.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. aceris
str. M302273]
Length = 328
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 172/361 (47%), Gaps = 78/361 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DFA L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRH-QGQYDFAKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A VK+N +S+ I +R+ N +
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKAN-GLSKAISVRQQANRKQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 189 --------------------------------------------ILLGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S+EEA P + GG +E+ C GGE FIT++I++
Sbjct: 205 CNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCDGGEIGFITQLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A+
Sbjct: 265 SALLPSQVAWFSTLVSKASNLPPIHSALKKAGALEVKVVEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 K 350
+
Sbjct: 325 R 325
>gi|170054516|ref|XP_001863164.1| ybiN [Culex quinquefasciatus]
gi|167874770|gb|EDS38153.1| ybiN [Culex quinquefasciatus]
Length = 456
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 169/341 (49%), Gaps = 60/341 (17%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + P DF L +P +GR ++D+ + A + LTRVLL D GL
Sbjct: 7 MHPRNIYRQKP-DFNALVKQFPELREVTTVDLNGRVKLDFKNREALQLLTRVLLRRDFGL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P G+L PT+P R NY+ W+ED+ + RN +V+G DIG GA+CIYPLLG
Sbjct: 66 EVDLPAGKLVPTLPLRLNYVLWLEDVEEA---LGWRRNRAEVRGLDIGCGASCIYPLLGV 122
Query: 136 S--LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
+ W VG + ++E A NV+ N ++R V+ E ++
Sbjct: 123 ARNRTRWKMVGLEKVRDSVESARGNVERNGLTG---DVRVVEQKEGEETV---------- 169
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+ G +DE+ GV GE+FDFC+CNPPF+E
Sbjct: 170 ------IRGFLDED--------------------------GV---GERFDFCMCNPPFYE 194
Query: 254 SMEEA----GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
E G P+ S G+ +E+ GGE F+ +II++S+ LK+ Y+SM+G K
Sbjct: 195 QDHEVENRTGHRPEPSAVSTGSMDELRTEGGELRFVEKIIDESLELKERITVYSSMLGHK 254
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
N ++ L+ GV+ TT F QG T RWG+AWSF A
Sbjct: 255 RNYDQILRILKGRGVSNFTTTRFFQGNTTRWGVAWSFSSEA 295
>gi|408675038|ref|YP_006874786.1| Ribosomal RNA large subunit methyltransferase F [Emticicia
oligotrophica DSM 17448]
gi|387856662|gb|AFK04759.1| Ribosomal RNA large subunit methyltransferase F [Emticicia
oligotrophica DSM 17448]
Length = 314
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 178/371 (47%), Gaps = 80/371 (21%)
Query: 2 GSKKRRRRR--EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFN 59
GS K ++ E+ +HP+N + DF L +L + +PFVF ++ G ID++D +
Sbjct: 5 GSTKSEKKEISNEKLELHPRNPHRFRY-DFRELTNLNEALKPFVFVNKFGTESIDFSDQD 63
Query: 60 ATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGD 115
A + L + +L + + NW IP LCP +P R++YIH++ DLL+ N IPT G
Sbjct: 64 AVKALNQAILKQFYNIPNWDIPQNYLCPPIPGRADYIHYLADLLADNNKNTIPT----GK 119
Query: 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175
++K DIG GANCIYP++G+ GW FVG+D+ VA++ A+ VKSN ++ IE R
Sbjct: 120 RIKVLDIGVGANCIYPIIGSQAYGWDFVGADIDPVAIKSAQNIVKSNNVLANKIEFR--- 176
Query: 176 NSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGV 235
+PSS+ F G+
Sbjct: 177 --------------------------------LQPSSNHIFK----------------GI 188
Query: 236 VRDGEQFDFCICNPPFFESMEEA-----------GLN--PKTSCGGTPEEMVCSGGERAF 282
+ E FD ICNPPF S A GL K + GG E+ C GGE AF
Sbjct: 189 INPNESFDASICNPPFHASSTAAAEGNERKNRNLGLKNTNKLNFGGQNAELWCEGGEEAF 248
Query: 283 ITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAW 342
+ +I +S + Q W+TS++ +K +L + L++V VKT QGQ +AW
Sbjct: 249 VRNMIFESKEISQQITWFTSLISKKEHLLSIYYYLKQVNALQVKTINMAQGQKISRIVAW 308
Query: 343 SFVPPARKIIS 353
+F KIIS
Sbjct: 309 TF-----KIIS 314
>gi|66044338|ref|YP_234179.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. syringae
B728a]
gi|75503208|sp|Q4ZXI1.1|RLMF_PSEU2 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|63255045|gb|AAY36141.1| 23S rRNA m(6)A-1618 methyltransferase [Pseudomonas syringae pv.
syringae B728a]
Length = 328
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 171/361 (47%), Gaps = 78/361 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DFA L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRH-QGQYDFAKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A VK+N +S+ I +R+ N
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKAN-GLSKAISVRQQANRRQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 189 --------------------------------------------ILLGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S+EEA P + GG +E+ C GGE FIT++I++
Sbjct: 205 CNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCDGGEIGFITQLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A+
Sbjct: 265 SALLPSQVAWFSTLVSKASNLPPIHSALKKAGALEVKVVEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 K 350
+
Sbjct: 325 R 325
>gi|410613569|ref|ZP_11324625.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola
psychrophila 170]
gi|410166893|dbj|GAC38514.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola
psychrophila 170]
Length = 303
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 161/357 (45%), Gaps = 85/357 (23%)
Query: 17 HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLN 76
H +N + ++ P A L + YP +P++ DG ID+ + N + L LL H + +
Sbjct: 3 HSRNLHQDSYP-LAQLVNSYPVLQPYILIKPDGGKTIDFANPNGVKALNAALLCHYYQVK 61
Query: 77 WW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYPL 132
+W IP G LCP VP R++Y+H+I DLL+ + ++P G +KG DIGTGAN IYP+
Sbjct: 62 FWDIPAGYLCPPVPGRADYVHYIADLLAKDNQAVVP----EGSTIKGLDIGTGANLIYPI 117
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+ GW VG+D+ V++ AE + SN ++ LI +R
Sbjct: 118 IATRSYGWQMVGTDIDPVSISSAETIIDSNSVLTNLINVR-------------------- 157
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
++ +P + GV++ GE F FCICNPPF
Sbjct: 158 -------------QQHDPQH------------------IFKGVIKPGEHFTFCICNPPFH 186
Query: 253 ESMEEAG---------------------LNPKTSC----GGTPEEMVCSGGERAFITRII 287
ES E A + K S G E+ C GGE FI RII
Sbjct: 187 ESAEHAKAVSQRKIQNLTKNKSKRESHIITQKKSAPLNFAGQSNELWCEGGELLFIQRII 246
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S RW++S+V +K NL + L +G+ +KT + QGQ +AW F
Sbjct: 247 TESREYATQIRWFSSLVSKKDNLIHIYKSLHDLGIANIKTVDMAQGQKVSRFVAWRF 303
>gi|237799867|ref|ZP_04588328.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022722|gb|EGI02779.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 328
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 176/366 (48%), Gaps = 80/366 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G VK DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNQGVIP----RGPSVKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ VA+ A VK+N + + I +R+ N +
Sbjct: 137 NCIYPLLGHSDYGWEFVGSDIDSVAIAAATTIVKAN-GLHKAISVRQQANRKQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ + E+F +
Sbjct: 189 --------------------------------------------ILLGLLDNSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG +E+ C GGE F+T++I++
Sbjct: 205 CNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTQLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K GV VK E QGQ +AW+F+ A+
Sbjct: 265 SAKLPAQVVWFSTLVSKASNLPPIQSALKKAGVLEVKVVEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 KIISPH 355
+ +PH
Sbjct: 325 R--TPH 328
>gi|261820174|ref|YP_003258280.1| SAM-dependent methyltransferase [Pectobacterium wasabiae WPP163]
gi|261604187|gb|ACX86673.1| rRNA (adenine-N(6)-)-methyltransferase [Pectobacterium wasabiae
WPP163]
Length = 311
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 69/353 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ + DF L YP+ PFV + G +D+ + A + L + LL H
Sbjct: 7 QKSGLHPRNRHRDRY-DFPALKQSYPALIPFVKVNAYGDESVDFANPEAVKTLNQALLQH 65
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + +W IPDG LCP +P R++YIH + DLL+ + R+ + D+G GANC+Y
Sbjct: 66 FYQIAHWTIPDGFLCPPIPGRADYIHHLADLLAEDNRSVVPRDASVL---DVGCGANCVY 122
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS++ +A++ A + +++NP ++ I +R+ NS++
Sbjct: 123 PLIGHREYGWRFTGSEINPLAMKAANETIEANPGLNRSIRLRRQKNSKA----------- 171
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ + FD +CNPP
Sbjct: 172 ----------------------------------------ILAGIIHKNDTFDAVMCNPP 191
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S E+A GL+ ++ + GG +E+ C GGE AFI ++I++SV+ +
Sbjct: 192 FHASAEDAREGSQRKLHNLGLDKRSPLNFGGQQDELWCEGGESAFIGQMIKESVSFARQC 251
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V RK NL + L V V+T + QGQ +AWSF+ A +
Sbjct: 252 LWFTSLVSRKENLPEIYRALEAVDAEKVRTIDMAQGQKQSRFVAWSFMDTAAR 304
>gi|385870360|gb|AFI88880.1| Ribosomal RNA large subunit methyltransferase F [Pectobacterium sp.
SCC3193]
Length = 311
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 69/353 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ + DF L YP+ PFV + G +D+ + A + L + LL H
Sbjct: 7 QKSGLHPRNRHRDRY-DFPALKQSYPALIPFVKVNAYGDESVDFANPEAVKTLNQALLQH 65
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + +W IPDG LCP +P R++YIH + DLL+ + R+ + D+G GANC+Y
Sbjct: 66 FYQIAHWTIPDGFLCPPIPGRADYIHHLADLLAEDNRSVVPRDASVL---DVGCGANCVY 122
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS++ +A++ A + +++NP ++ I +R+ NS++
Sbjct: 123 PLIGHREYGWRFTGSEINPLAMKAANETIEANPGLNRSIRLRRQKNSKA----------- 171
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ + FD +CNPP
Sbjct: 172 ----------------------------------------ILAGIIHKNDTFDAVMCNPP 191
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S E+A GL+ ++ + GG +E+ C GGE AFI ++I++SV+ +
Sbjct: 192 FHASAEDAREGSQRKLHNLGLDKRSPLNFGGQQDELWCEGGESAFIGQMIKESVSFARQC 251
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V RK NL + L V V+T + QGQ +AWSF+ A +
Sbjct: 252 LWFTSLVSRKENLPEIYRALEAVDAEKVRTIDMAQGQKQSRFVAWSFMDTAAR 304
>gi|365834064|ref|ZP_09375513.1| rRNA adenine N-6-methyltransferase [Hafnia alvei ATCC 51873]
gi|364570405|gb|EHM48017.1| rRNA adenine N-6-methyltransferase [Hafnia alvei ATCC 51873]
Length = 315
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 173/367 (47%), Gaps = 68/367 (18%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M + K++ ++ +HP+N + E DF L P + FV ++ G ID+ D A
Sbjct: 1 MKNPKKKSFPAQKTNLHPRNLHRERY-DFPALCETSPELKAFVARNQWGDASIDFADPLA 59
Query: 61 TRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG 119
+ L LL H + + W IPDG LCP +P R++Y+H++ D+L+S+ R G V
Sbjct: 60 VKALNSALLQHFYQIGHWDIPDGYLCPPIPGRADYLHYLADVLASDNGYQVPR-GPNVCI 118
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIG GANCIYPL+G GW F G+++ VAL+ A +K+NP ++ I +R
Sbjct: 119 LDIGVGANCIYPLIGQHEYGWRFTGTEIDPVALKSAGAVIKANPEAAKNIRLR------- 171
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
++ +P+ +L G ++ G
Sbjct: 172 --------------------------QQQDPAK------------------ILKGAIKAG 187
Query: 240 EQFDFCICNPPFFESMEEA--------------GLNPKTSCGGTPEEMVCSGGERAFITR 285
E + +CNPPF S EEA P + GG E+ C GGE AFIT+
Sbjct: 188 EHYAATLCNPPFHSSAEEALNGTRRKLTNLGRDASKPVLNFGGKAGELWCEGGEVAFITK 247
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+IE+S + + W+TS+V R+ NL + L V V+T E QGQ +AW+F+
Sbjct: 248 MIEESESYAKQVGWFTSLVSRQENLPAIYEALEDVEALDVRTVEMSQGQKVSRFVAWTFL 307
Query: 346 PPARKII 352
P ++ I
Sbjct: 308 PENKRKI 314
>gi|302188391|ref|ZP_07265064.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
syringae 642]
Length = 328
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 172/361 (47%), Gaps = 78/361 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRH-QGQYDFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K D+GTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLADDNDGVIP----RGASIKALDVGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A VK+N +S+ I +R+ N +
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKAN-GLSKAISVRQQGNRKQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 189 --------------------------------------------ILLGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S+EEA P + GG +E+ C GGE F+T++I++
Sbjct: 205 CNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTQLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K GV VK E QGQ +AW+F+ A+
Sbjct: 265 SALLPSQVAWFSTLVSKASNLPPIQSALKKAGVLEVKIVEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 K 350
+
Sbjct: 325 R 325
>gi|298159637|gb|EFI00680.1| Putative ribosomal RNA small subunit methyltransferase J
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 365
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 173/361 (47%), Gaps = 78/361 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DFA L P FV + G+ ID+ D A R R LL
Sbjct: 38 REKATLHPRNRH-QGHYDFAKLIKSSPELAAFVILNPYGKESIDFADPQAVRVFNRALLK 96
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 97 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 152
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN +
Sbjct: 153 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRKQ------- 204
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 205 --------------------------------------------ILLGLLDSSERFHVSL 220
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG +E+ C GGE F+TR+I++
Sbjct: 221 CNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTRLIQE 280
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A+
Sbjct: 281 SATLPSQVVWFSTLVSKASNLPPIQSALKKAGAREVKVIEMGQGQKQSRFVAWTFLDKAQ 340
Query: 350 K 350
+
Sbjct: 341 R 341
>gi|289623821|ref|ZP_06456775.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649172|ref|ZP_06480515.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422583003|ref|ZP_16658133.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330867840|gb|EGH02549.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 328
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 175/366 (47%), Gaps = 80/366 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DFA L P FV + G+ ID+ D A R R LL
Sbjct: 22 REKATLHPRNRH-QGHYDFAKLIKSSPELAAFVILNPYGKESIDFADPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRNQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 189 --------------------------------------------ILLGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG +E+ C GGE F+TR+I++
Sbjct: 205 CNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTRLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A+
Sbjct: 265 SATLPSQVVWFSTLVSKASNLPPIQSALKKAGAREVKVIEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 KIISPH 355
+ +PH
Sbjct: 325 R--TPH 328
>gi|384483523|gb|EIE75703.1| hypothetical protein RO3G_00407 [Rhizopus delemar RA 99-880]
Length = 328
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 165/338 (48%), Gaps = 90/338 (26%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y+ P DF LA+ + SF+ FV +GR I++ D NA +
Sbjct: 1 MHPRNIYNVEP-DFKQLATTFDSFKTFVKEGLNGRSFINFKDPNAVK------------- 46
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
LCP +PNR NYI W+EDLLS + TT K KG DIG GA+CIYPLL
Sbjct: 47 --------LCPAIPNRLNYILWLEDLLSETMETTT-----KAKGIDIGVGASCIYPLLAC 93
Query: 136 SLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ WSF+G+++ ++++A+KN++ N H+ + I
Sbjct: 94 ACHPHWSFLGTEIDTRSMDYAKKNIERN-HLEDRI------------------------- 127
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD-GEQFDFCICNPPFFE 253
Q Y+ P + + D E FDFC+CNPPF+E
Sbjct: 128 ----------------------------QLMYNKDPDKIFPLDDEKETFDFCMCNPPFYE 159
Query: 254 SME--EAG-----LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR 306
S E E G L P C G+ EM+ +GGE FI+++I +SV L RWYTSM+G
Sbjct: 160 SKEALEEGMSNKELEPYAVCTGSSNEMITTGGEYGFISKMINESVRLGTRIRWYTSMLGM 219
Query: 307 KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
K ++ L+ +++ +T TE QG+T RW +AWSF
Sbjct: 220 KKSIGPLVRLIKQAKITNYLVTELTQGKTTRWVIAWSF 257
>gi|317492515|ref|ZP_07950943.1| ribosomal RNA large subunit methyltransferase F [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316919507|gb|EFV40838.1| ribosomal RNA large subunit methyltransferase F [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 315
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 173/367 (47%), Gaps = 68/367 (18%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M + K++ ++ +HP+N + E DF L P + FV ++ G ID+ D A
Sbjct: 1 MKNPKKKSFPAQKTNLHPRNLHRERY-DFPALCETSPELKAFVARNQWGDDSIDFADPLA 59
Query: 61 TRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG 119
+ L LL H + + W IPDG LCP +P R++Y+H++ D+L+S+ R G V
Sbjct: 60 VKALNSALLQHFYQIGHWDIPDGYLCPPIPGRADYLHYLADVLASDNGYQVPR-GPNVCI 118
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIG GANCIYPL+G GW F G+++ VAL+ A +K+NP ++ I +R
Sbjct: 119 LDIGVGANCIYPLIGQHEYGWRFTGTEIDPVALKSAGAVIKANPEAAKNIRLR------- 171
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
++ +P+ +L G ++ G
Sbjct: 172 --------------------------QQQDPAK------------------ILKGAIKAG 187
Query: 240 EQFDFCICNPPFFESMEEA--------------GLNPKTSCGGTPEEMVCSGGERAFITR 285
E + +CNPPF S EEA P + GG E+ C GGE AFIT+
Sbjct: 188 EHYAATLCNPPFHSSAEEALNGTRRKLTNLGRDASKPVLNFGGKAGELWCEGGEVAFITK 247
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+IE+S + + W+TS+V R+ NL + L V V+T E QGQ +AW+F+
Sbjct: 248 MIEESESYAKQVGWFTSLVSRQENLPAIYEALEDVEALDVRTVEMSQGQKVSRFVAWTFL 307
Query: 346 PPARKII 352
P ++ I
Sbjct: 308 PENKRKI 314
>gi|421081099|ref|ZP_15542013.1| Ribosomal RNA large subunit methyltransferase F [Pectobacterium
wasabiae CFBP 3304]
gi|401704109|gb|EJS94318.1| Ribosomal RNA large subunit methyltransferase F [Pectobacterium
wasabiae CFBP 3304]
Length = 311
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 173/353 (49%), Gaps = 69/353 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ + DF L YP+ PFV + G +D+ + A + L + LL H
Sbjct: 7 QKSGLHPRNRHRDRY-DFPALKQSYPALIPFVKVNAYGDESVDFANPEAVKTLNQALLQH 65
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + +W IPDG LCP +P R++YIH + DLL+ + R+ + D+G GANC+Y
Sbjct: 66 FYQIAHWTIPDGFLCPPIPGRADYIHHLADLLAEDNRSVVPRDASVL---DVGCGANCVY 122
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS++ +A++ A + +++NP ++ I +R+ NS++
Sbjct: 123 PLIGHREYGWRFTGSEINPLAMKAANETIEANPGLNRSIRLRRQKNSKA----------- 171
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ + FD +CNPP
Sbjct: 172 ----------------------------------------ILAGIIHKNDTFDAVMCNPP 191
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S E+A GL+ ++ + GG +E+ C GGE AFI+++I++S +
Sbjct: 192 FHASAEDAREGSQRKLHNLGLDKRSPLNFGGQQDELWCEGGESAFISQMIKESAGFARQC 251
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V RK NL + L V V+T + QGQ +AWSF+ A +
Sbjct: 252 LWFTSLVSRKENLPEIYRALEAVDAEKVRTIDMAQGQKQSRFVAWSFLDTAAR 304
>gi|311745306|ref|ZP_07719091.1| putative methyltransferase YbiN [Algoriphagus sp. PR1]
gi|126577839|gb|EAZ82059.1| putative methyltransferase YbiN [Algoriphagus sp. PR1]
Length = 319
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 170/362 (46%), Gaps = 69/362 (19%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K+ + E +P +HP N + + DF L + P E FV ++ G ID+ D A +EL
Sbjct: 2 KKTPKNELKPGLHPSNLHRDRY-DFPSLINTQPELEKFVAENKYGDLSIDFADPKAVKEL 60
Query: 65 TRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
R LL H + + +W IP G LCP +P R +Y+H++ DLLS + G+KV D+G
Sbjct: 61 NRALLKHFYQISDWDIPSGYLCPPIPGRVDYLHYLADLLS-DCNKGKLPEGEKVNVLDLG 119
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGANCIYPLLG + W+FVGS++ A+ A++N+ SNP I + + +R +N +
Sbjct: 120 TGANCIYPLLGTRIYNWNFVGSEIDPKAIHSAQQNLNSNPQILKKVNLRLQENPKE---- 175
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+L G++R + FD
Sbjct: 176 -----------------------------------------------ILSGIIRSDDVFD 188
Query: 244 FCICNPPFFESMEEA---------------GLNPKTSCGGTPEEMVCSGGERAFITRIIE 288
+CNPPF ES E A G + GG E+ C GGE FI ++I
Sbjct: 189 LVLCNPPFHESKEAALAGSTRKVKNLKGKVGKTVTLNFGGQSNELWCKGGELTFIRKMIL 248
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
+S K W+TS+V ++ +LK LI L+K V K + G +AW+F+ P
Sbjct: 249 ESKIYKFNCYWFTSLVSKEEHLKDLILALKKANVAERKIIQMTHGNKKTRFIAWTFLNPT 308
Query: 349 RK 350
++
Sbjct: 309 QQ 310
>gi|354599130|ref|ZP_09017147.1| Ribosomal RNA large subunit methyltransferase F [Brenneria sp.
EniD312]
gi|353677065|gb|EHD23098.1| Ribosomal RNA large subunit methyltransferase F [Brenneria sp.
EniD312]
Length = 316
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 163/347 (46%), Gaps = 69/347 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ DF L ++P+ PFV + G +D++D A + L + LL H
Sbjct: 11 QKNRLHPRNRHGGRY-DFTALKQIHPALIPFVKVNAYGDESVDFSDPQAVKVLNQALLHH 69
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + +W IPDG LCP VP R++Y+H + DLL+ + R + D+G GANCIY
Sbjct: 70 FYQIEHWIIPDGFLCPPVPGRADYLHHLADLLAEDNQSVVPRGASVL---DVGCGANCIY 126
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS++ A++ A +++NP ++ I +R+ NS++
Sbjct: 127 PLIGHREYGWRFTGSEINPQAMQAANATIEANPGLNRAIRLRRQKNSKA----------- 175
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ E FD +CNPP
Sbjct: 176 ----------------------------------------ILTGIIHKNEIFDAVLCNPP 195
Query: 251 FFESMEEA-----------GL--NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S EA GL N + GG EE+ C GGE AFI+++I +S +
Sbjct: 196 FHASAAEARQGSQRKLHNLGLDKNSPLNFGGRQEELWCEGGETAFISQMINESAGFARQC 255
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V RK NL L L VG V T QGQ +AWSF
Sbjct: 256 LWFTSLVSRKENLPELYRALENVGTEKVATINMAQGQKQSRFVAWSF 302
>gi|374703740|ref|ZP_09710610.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. S9]
Length = 338
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 165/353 (46%), Gaps = 71/353 (20%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ + +HP+N++ + DF L P FV + G+ ID+ + A + R LL
Sbjct: 25 QAKGQLHPRNRH-QGRYDFPALIQASPELAAFVIINPYGKESIDFANPEAVKVFNRALLK 83
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCI 129
+G+ W IP LCP +P R++Y+H++ DLL+ N R G +K D+G GANCI
Sbjct: 84 QFYGIEHWDIPADYLCPPIPGRADYLHYLADLLAKNNAGVIPR-GRHIKALDVGVGANCI 142
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
YPLLG W FV SD+ A++ A+ + +NP + IE+R
Sbjct: 143 YPLLGHHEYNWQFVCSDIASTAIDSAQAIINANPGLDGAIELR----------------- 185
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
+Q + SGH VL G++RD ++FD +CNP
Sbjct: 186 --LQTD-----SGH---------------------------VLDGLIRDDDRFDITLCNP 211
Query: 250 PFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVA 292
PF S +EA L+PK GG E+ C GGE AF+ R+I +S
Sbjct: 212 PFHASADEATRGSTRKWRNLGKLDPKRKLPVLNFGGQAAELWCKGGEAAFVARLINESAN 271
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
Q W+++++ + NL + S L KVG V+T E QGQ +AWSF+
Sbjct: 272 HGQQVLWFSTLISKAGNLGGVYSALNKVGAQEVRTVEMAQGQKQSRFVAWSFL 324
>gi|71555523|gb|AAZ34734.1| Predicted SAM-dependent methyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 344
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 176/365 (48%), Gaps = 80/365 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DFA L P FV + G+ ID+ D A R R LL
Sbjct: 39 EKATLHPRNRH-QGHYDFAKLIKSSPELAAFVILNPYGKESIDFADPQAVRVFNRALLKA 97
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGAN
Sbjct: 98 FYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGAN 153
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN +
Sbjct: 154 CIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRKQ-------- 204
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L+G++ E+F +C
Sbjct: 205 -------------------------------------------ILLGLLDSSERFHVSLC 221
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S++EA P + GG +E+ C GGE F+TR+I++S
Sbjct: 222 NPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTRLIQES 281
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W++++V + SNL + + L+K G VK E QGQ +AW+F+ A++
Sbjct: 282 ATLPSQVVWFSTLVSKASNLPPIQNALKKAGALEVKVIEMGQGQKQSRFVAWTFLDKAQR 341
Query: 351 IISPH 355
+PH
Sbjct: 342 --TPH 344
>gi|161611341|ref|YP_273419.2| SAM-dependent methyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|205829585|sp|Q48MF3.2|RLMF_PSE14 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
Length = 328
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 176/365 (48%), Gaps = 80/365 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DFA L P FV + G+ ID+ D A R R LL
Sbjct: 23 EKATLHPRNRH-QGHYDFAKLIKSSPELAAFVILNPYGKESIDFADPQAVRVFNRALLKA 81
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGAN
Sbjct: 82 FYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGAN 137
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN +
Sbjct: 138 CIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRKQ-------- 188
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L+G++ E+F +C
Sbjct: 189 -------------------------------------------ILLGLLDSSERFHVSLC 205
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S++EA P + GG +E+ C GGE F+TR+I++S
Sbjct: 206 NPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTRLIQES 265
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W++++V + SNL + + L+K G VK E QGQ +AW+F+ A++
Sbjct: 266 ATLPSQVVWFSTLVSKASNLPPIQNALKKAGALEVKVIEMGQGQKQSRFVAWTFLDKAQR 325
Query: 351 IISPH 355
+PH
Sbjct: 326 --TPH 328
>gi|268573200|ref|XP_002641577.1| Hypothetical protein CBG09879 [Caenorhabditis briggsae]
gi|74791081|sp|Q61J97.1|MET16_CAEBR RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
Full=Methyltransferase 10 domain-containing protein
Length = 481
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 168/353 (47%), Gaps = 78/353 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + PPDF LA YP F F Y +G+ +D+ A R LT+ LL D L
Sbjct: 7 MHPRNPYRDKPPDFKALAIEYPEFRKFCQYVSNGKVTLDFRKDAAVRCLTQTLLKKDFSL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
N +P G L P VP + NY I+D+L +N I + V G DIGTG +CI+ L+GA
Sbjct: 67 NVNLPAGHLVPRVPQKLNYCLLIDDILQANSITSN------VVGIDIGTGTSCIHALIGA 120
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW FV +D + +++ A +NV N + + I + V+ P+++ L
Sbjct: 121 RHFGWKFVATDGDENSVQVAHENVARN-EMGDSICVVHVN-----PAVKTVL-------- 166
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES- 254
MD+ M P S +F FC+CNPPFFE
Sbjct: 167 --MDVINSM-----PDS----------------------------EFSFCMCNPPFFEKS 191
Query: 255 ------MEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
EE L+ P + + E+ GGE AF+ RII+DSV L
Sbjct: 192 DKEERFCEEPSLSNETYSNNFDFDMRSAPHSETIASSAELYVEGGEVAFVNRIIDDSVCL 251
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTI-VKTTEFVQGQTCRWGLAWSFV 345
+ ++YT+M+GRKS+LK L+ +L + G + QG+T RW LAW+F
Sbjct: 252 RDRIKFYTTMIGRKSSLKPLLQRLERFGENVKFLVHPLNQGKTKRWMLAWTFA 304
>gi|109897904|ref|YP_661159.1| putative SAM-dependent methyltransferase [Pseudoalteromonas
atlantica T6c]
gi|123064746|sp|Q15VI3.1|RLMF_PSEA6 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|109700185|gb|ABG40105.1| 23S rRNA m(6)A-1618 methyltransferase [Pseudoalteromonas atlantica
T6c]
Length = 330
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 165/360 (45%), Gaps = 86/360 (23%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N + P AL S YP+ E V ++ G+ ID++ + + L LL+H +G
Sbjct: 25 TMHPRNVHRNGYPMSALCQS-YPTLEAHVIKAKSGQQSIDFSKAASVKALNAALLIHYYG 83
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIY 130
LN W IP+G LCP VP R++YIH + DLL+ + ++PT G++V G DIG GAN IY
Sbjct: 84 LNMWDIPEGYLCPPVPGRADYIHGLADLLAKDNKGVVPT----GNRVIGLDIGVGANAIY 139
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P++G+ GW FVGSD+ DVAL+ A +NP + L+ +RK
Sbjct: 140 PIIGSQTYGWDFVGSDIDDVALKSATTLANNNPKLKPLLAVRK----------------- 182
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
Q + +G +++ + F F +CNPP
Sbjct: 183 --QHDKAYIFAG--------------------------------IIQPDDHFTFSLCNPP 208
Query: 251 FFESMEEAGLNP--------------------------KTSCGGTPEEMVCSGGERAFIT 284
F +S EEA + K + G E+ C GGE AFI
Sbjct: 209 FHKSAEEAAMGSLRKVKGLGRNKQKSNNTGNAQPITANKLNFAGQSNELWCDGGELAFIQ 268
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
R+I++SV + W+T +V + +LK + + R G + QGQ +AW F
Sbjct: 269 RMIKESVEYQSQVGWFTCLVSKSLHLKAIETSARYFGAKQFMKVDMGQGQKISRFVAWKF 328
>gi|416025389|ref|ZP_11569123.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320329797|gb|EFW85785.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 344
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 175/365 (47%), Gaps = 80/365 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DF L P FV + G+ ID+ D A R R LL
Sbjct: 39 EKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKQSIDFADPQAVRVFNRALLKA 97
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGAN
Sbjct: 98 FYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGAN 153
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN +
Sbjct: 154 CIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRKQ-------- 204
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L+G++ E+F +C
Sbjct: 205 -------------------------------------------ILLGLLDSSERFHVSLC 221
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S++EA P + GG +E+ C GGE F+TR+I++S
Sbjct: 222 NPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTRLIQES 281
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A++
Sbjct: 282 ATLPSQVVWFSTLVSKASNLPPIQSALKKAGALEVKVIEMGQGQKQSRFVAWTFLDKAQR 341
Query: 351 IISPH 355
+PH
Sbjct: 342 --TPH 344
>gi|319955578|ref|YP_004166845.1| 23S rRNA m(6)a-1618 methyltransferase [Cellulophaga algicola DSM
14237]
gi|319424238|gb|ADV51347.1| 23S rRNA m(6)A-1618 methyltransferase [Cellulophaga algicola DSM
14237]
Length = 283
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 164/343 (47%), Gaps = 76/343 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HPKN + P DF L + + + FV ++ ID+++ NA EL + LL H + +
Sbjct: 1 MHPKNLHHA-PYDFQALKNSHEALAEFVILNKYNTESIDFSNPNAVLELNKALLKHHYKV 59
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W +P G LCP +P R++YIH I DL+++ +++ ++KG DIGTGANCIYP+LG
Sbjct: 60 ASWTLPKGYLCPPIPGRADYIHHIYDLVAA------TKSKTQLKGLDIGTGANCIYPILG 113
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A L GW VGSD+ VAL A +N + + + IEIR
Sbjct: 114 AQLYGWKMVGSDIDAVALASAVENTEL---LKDKIEIR--------------------SQ 150
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ESN D + G+++DGE FDF +CNPPF S
Sbjct: 151 ESNAD-------------------------------IFKGIIKDGEYFDFTLCNPPFHAS 179
Query: 255 MEEAGLNP-------------KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
+EA K + GG E+ C+GGE FI R+I+ S+ K W+T
Sbjct: 180 EKEAIAGTRRKLKNLKSNAAFKQNFGGQANELWCNGGEALFIKRMIKQSIPFKNQVGWFT 239
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+V + NL + +L K + +T E QG +AW F
Sbjct: 240 CLVSKSENLAKIYKQLDKAKAS-YQTVEMEQGNKKSRFIAWKF 281
>gi|375011643|ref|YP_004988631.1| putative SAM-dependent methyltransferase [Owenweeksia hongkongensis
DSM 17368]
gi|359347567|gb|AEV31986.1| putative SAM-dependent methyltransferase [Owenweeksia hongkongensis
DSM 17368]
Length = 328
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 175/367 (47%), Gaps = 75/367 (20%)
Query: 3 SKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATR 62
S K++ + + ++H +N++ + DF L P FV + G ID+ + A +
Sbjct: 4 SDKKKEHPKVKSSLHARNRHRQRY-DFKALTESSPDLAAFVKPNNYGDESIDFFNPEAVK 62
Query: 63 ELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN---GDKVK 118
L + LL H +G++ W IP+ LCP +P R++Y+H I DLL+ + N G+ +K
Sbjct: 63 ALNKALLKHHYGVDHWDIPESYLCPPIPGRADYLHHIADLLAQ----SNGGNLLIGEHIK 118
Query: 119 GFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
D+G GANCIYP++G GW FVGSD+ VA++ A K V++NP ISE IE+R +
Sbjct: 119 CLDVGVGANCIYPIIGNVEYGWRFVGSDIDPVAIKSARKIVEANPLISEEIELR----LQ 174
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
S P + GV++
Sbjct: 175 SNPRF-----------------------------------------------IFEGVLKP 187
Query: 239 GEQFDFCICNPPFFESMEEA---------------GLNPKTSCGGTPEEMVCSGGERAFI 283
GEQ D ICNPPF S EA + P + GG E+ C GGE+ F+
Sbjct: 188 GEQVDLAICNPPFHSSKAEAQAGTVRKLRNLKHKKDVKPVLNFGGNNNELWCEGGEQKFV 247
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
+I +S + W++S++ +++NLK + L+KVG VKT QG +AW+
Sbjct: 248 KDMIFESRRFSNSCFWFSSLISKEANLKSVYKTLKKVGAISVKTIPMGQGNKVSRIVAWT 307
Query: 344 FVPPARK 350
F+ PA++
Sbjct: 308 FLTPAQQ 314
>gi|253687041|ref|YP_003016231.1| rRNA (adenine-N(6)-)-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259491699|sp|C6D8Y7.1|RLMF_PECCP RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|251753619|gb|ACT11695.1| rRNA (adenine-N(6)-)-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 311
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 168/349 (48%), Gaps = 69/349 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L YP+ PFV + G +D+ + A + L + LL H + +
Sbjct: 11 LHPRNRHRDRY-DFPTLKHSYPALIPFVTVNAYGDESVDFANPEAVKTLNQALLQHFYQI 69
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IPDG LCP +P R++YIH + DLL+ + R + DIG GANCIYPL+G
Sbjct: 70 EHWEIPDGFLCPPIPGRADYIHHLADLLAEDNRAVVPREASVL---DIGCGANCIYPLIG 126
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW F GS++ +A++ A + +++NP ++ I +R+ +S +
Sbjct: 127 YREYGWRFTGSEINPIAMKAANQTIEANPGLNRAIRLRRQKSSTA--------------- 171
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+L G++ E FD +CNPPF S
Sbjct: 172 ------------------------------------ILAGIIHKNETFDAVMCNPPFHAS 195
Query: 255 MEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
E+A GL+ ++ + GG +E+ C GGE AFI ++I++S + W+T
Sbjct: 196 AEDARQGSQRKLHNLGLDKRSPLNFGGQQDELWCEGGESAFIGQMIKESAGFARQCLWFT 255
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
S+V RK NL + L V V+T + QGQ +AWSF+ A +
Sbjct: 256 SLVSRKENLPEIYRALEAVDAEKVRTIDMAQGQKQSRFVAWSFLDTAAR 304
>gi|416018339|ref|ZP_11565326.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
glycinea str. B076]
gi|320322894|gb|EFW78985.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
glycinea str. B076]
Length = 328
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 80/366 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DF L P FV + G+ ID+ D A R R LL
Sbjct: 22 REKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKQSIDFADPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN +
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRKQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 189 --------------------------------------------ILLGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG +E+ C GGE F+TR+I++
Sbjct: 205 CNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTRLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A+
Sbjct: 265 SATLPSQVVWFSTLVSKASNLPPIQSALKKAGALEVKVIEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 KIISPH 355
+ +PH
Sbjct: 325 R--TPH 328
>gi|422403536|ref|ZP_16480593.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330874223|gb|EGH08372.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 328
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 175/366 (47%), Gaps = 80/366 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DF L P FV + G+ ID+ D A R R LL
Sbjct: 22 REKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKQSIDFADPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN +
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRKQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+F +
Sbjct: 189 --------------------------------------------ILLGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG +E+ C GGE F+TR+I++
Sbjct: 205 CNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTRLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A+
Sbjct: 265 SATLPSQVVWFSTLVSKASNLPPIQSALKKAGALEVKVIEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 KIISPH 355
+ +PH
Sbjct: 325 R--TPH 328
>gi|257487396|ref|ZP_05641437.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|422598017|ref|ZP_16672283.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422679664|ref|ZP_16737937.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|330988300|gb|EGH86403.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009011|gb|EGH89067.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 328
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 176/366 (48%), Gaps = 80/366 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DFA L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRH-QGHYDFAKLIKSSPELAAFVILNPYGKQSIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN +
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRKQ------- 188
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+LVG++ E+F +
Sbjct: 189 --------------------------------------------ILVGLLDSSERFHVSL 204
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG +E+ C GGE F+T++I++
Sbjct: 205 CNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCKGGEIGFVTQLIQE 264
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A+
Sbjct: 265 SATLPSQVVWFSTLVSKASNLPPIQSALKKAGALEVKVIEMGQGQKQSRFVAWTFLDKAQ 324
Query: 350 KIISPH 355
+ +PH
Sbjct: 325 R--TPH 328
>gi|163755797|ref|ZP_02162915.1| SAM-dependent methyltransferase [Kordia algicida OT-1]
gi|161324318|gb|EDP95649.1| SAM-dependent methyltransferase [Kordia algicida OT-1]
Length = 305
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 172/357 (48%), Gaps = 75/357 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
++R+ + +HP NK+ + DF+LL P+ +PFV ++ G ID+ D A + L +
Sbjct: 5 KKRKVIKSKLHPLNKH-QGRYDFSLLTKTCPALKPFVLLNKFGDESIDFFDPKAVKMLNK 63
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDI 122
LL H + +++W IP LCP +P R++YIH++ LL+ IP G+K+ DI
Sbjct: 64 ALLKHYYAIDFWEIPANYLCPPIPGRADYIHYLATLLAETNQGKIP----KGEKITCLDI 119
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
GTGANCIYP++G GWSFV SD+ +V++E A V +N ++ I R+ +N
Sbjct: 120 GTGANCIYPIIGTQEYGWSFVASDIDEVSIENARNIVANNENLQGCIAFRQQENPNQ--- 176
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ G+++ ++F
Sbjct: 177 ------------------------------------------------IFKGIIQSKDKF 188
Query: 243 DFCICNPPFFESMEEA------------GLNP---KTSCGGTPEEMVCSGGERAFITRII 287
+CNPPF +S +EA G P + + GG E+ C GGE+ FI +I
Sbjct: 189 TVTLCNPPFHKSAKEAQAGTLRKLQNLKGKKPVKTELNFGGQHNELWCKGGEKKFIKTMI 248
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++S + +W+T++V +++NL + L++V T VKT QG +AWSF
Sbjct: 249 QESKQFSKQCQWFTTLVSKEANLPAIYDALKRVNATTVKTIPMGQGNKVSRMVAWSF 305
>gi|367023196|ref|XP_003660883.1| hypothetical protein MYCTH_2299692 [Myceliophthora thermophila ATCC
42464]
gi|347008150|gb|AEO55638.1| hypothetical protein MYCTH_2299692 [Myceliophthora thermophila ATCC
42464]
Length = 491
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 198/444 (44%), Gaps = 99/444 (22%)
Query: 27 PDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCP 86
PDF LA P F + ++D++D AT +LT+ LL D GL +PD +LCP
Sbjct: 66 PDFRQLARRDPQFAAVL----QDNGQLDFSDPAATMQLTKTLLHLDFGLKLDLPDDRLCP 121
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
VPNR NYI W+++L+ S + G + G DIGTGA+CIYPLLG + W F+ +D
Sbjct: 122 PVPNRHNYILWLKELMDST---SYEHPGRSLCGLDIGTGASCIYPLLGVAQRPWRFIATD 178
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ L +AE+N++ N IR +D + P +
Sbjct: 179 IDAKNLSYAERNIRLNGLQD---RIRLLDRKPNDPLV----------------------- 212
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE-------AG 259
P VG+ DF + NPPF+ S E+
Sbjct: 213 ----------------------PLDDVGIA---SAVDFVMMNPPFYASEEDMLSSANKKA 247
Query: 260 LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319
P ++C G P EMVC GGE A + R++ +S+ L+ +WYTSM+G+ ++L+ L+ +LR
Sbjct: 248 RPPMSACSGAPVEMVCDGGEVAHVGRLLRESLILRDRIQWYTSMLGKLTSLEVLVEQLRD 307
Query: 320 VGVTIVKTTEFVQG-QTCRWGLAWSFVP--PA------------RKIISPHVAEK----- 359
+ TEFVQG +T RW L WSF P PA +KI+ P V +
Sbjct: 308 HAIDNYAVTEFVQGSKTRRWALGWSFGPMRPAEHVARGMKASLWKKILPPSVTAELLVLP 367
Query: 360 --KNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVNITVSNDQCNTILKN 417
+++ + VQ AL+++ + +A G V T N +
Sbjct: 368 ADQSVGPITSRVQDIMGALELMSWVWEPEAAKG-----------VGRTRENVWSRAWRRK 416
Query: 418 EVNRVDEGPTSK-HLEETSSSSSC 440
++ EG SK H + S S C
Sbjct: 417 KLREQQEGTKSKAHYDTGSESEGC 440
>gi|224824479|ref|ZP_03697586.1| protein of unknown function DUF890 [Pseudogulbenkiania ferrooxidans
2002]
gi|224602972|gb|EEG09148.1| protein of unknown function DUF890 [Pseudogulbenkiania ferrooxidans
2002]
Length = 318
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 168/353 (47%), Gaps = 79/353 (22%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N + + DFA L + P PFV + G +D+ D A + L R LL H
Sbjct: 10 KPGLHPRNAHRQRY-DFAALIAACPDLAPFVARNAYGDDSVDFADPAAVKMLNRALLAHH 68
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD----KVKGFDIGTGAN 127
+G+ +W IP G LCP +P R++YIH + DLL+++ NG +V DIG GAN
Sbjct: 69 YGIAHWDIPPGYLCPPIPGRADYIHHLADLLAAS-------NGGALPARVNALDIGVGAN 121
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
C+YP++G ++ GW FVGSD+ +AL A+ V +NP ++ + +R+
Sbjct: 122 CVYPIIGRAVYGWRFVGSDIDPLALRSAQAIVDANPVLAGAVRLRR-------------- 167
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+SS N V GV++ ++FD +C
Sbjct: 168 ------------------------QASSAN-------------VFRGVIKRDDRFDLTLC 190
Query: 248 NPPFFESMEEA------------GLNPKTSC---GGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S +EA G P + GG E+ C GGE F+ ++ +S
Sbjct: 191 NPPFHASAQEAEAGTRRKLTNLSGKRPAKTVLNFGGQHAELWCDGGEAGFLRTMVSESAG 250
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W++S+V +++NL L L++ G V+T QGQ +AWS++
Sbjct: 251 FARQCCWFSSLVSKEANLPGLYRALKQAGARRVETIAMAQGQKTSRLVAWSYL 303
>gi|339485935|ref|YP_004700463.1| putative SAM-dependent methyltransferase [Pseudomonas putida S16]
gi|338836778|gb|AEJ11583.1| putative SAM-dependent methyltransferase [Pseudomonas putida S16]
Length = 316
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 3 EKPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKA 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP +P R++YIH DLL+ + + G +V+ DIG GANCIY
Sbjct: 62 QYGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGEIPK-GAQVRALDIGVGANCIY 120
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 121 PLLGHSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAITLRQQANRAH----------- 168
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++++GE+FD +CNPP
Sbjct: 169 ----------------------------------------ILSGLLQEGERFDLTLCNPP 188
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F S +EA P + GG E+ C GGE F+++++ +SV
Sbjct: 189 FHASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVSQLVSESVQY 248
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V + SNL + + LRK G V+ +E QGQ +AWSF
Sbjct: 249 AERVLWFTSLVSKASNLPGIEAALRKAGAKAVRISEMGQGQKQSRMVAWSF 299
>gi|170060758|ref|XP_001865942.1| ybiN [Culex quinquefasciatus]
gi|167879123|gb|EDS42506.1| ybiN [Culex quinquefasciatus]
Length = 456
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 165/341 (48%), Gaps = 60/341 (17%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + P DF L +P +GR ++D+ + A + LTRVLL D GL
Sbjct: 7 MHPRNIYRQKP-DFNALVKQFPELRGVTTVDLNGRVKLDFKNREALQLLTRVLLRRDFGL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P G+L PT+P R NYI W+ED+ + RN +++G DIG GA+CIYPLLG
Sbjct: 66 EVELPAGKLVPTLPLRLNYILWLEDVEEA---LGWRRNRAELRGLDIGCGASCIYPLLGV 122
Query: 136 S--LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
+ W VG + ++E A NV+ N ++ + + + E+ I+ L G V
Sbjct: 123 ARNRTRWKMVGLEKVRDSVESARGNVERNGLTGDVRVVEQKEGEETV--IRGFLEGDGV- 179
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
GE+FDFC+CNPPF+E
Sbjct: 180 ---------------------------------------------GERFDFCMCNPPFYE 194
Query: 254 SMEEA----GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
E G P+ S G+ +E+ GGE F+ +II++S+ LK+ Y+SM+G K
Sbjct: 195 QDHEVENRTGHRPEPSAVSTGSMDELRTEGGELRFVEKIIDESLELKERITVYSSMLGHK 254
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
N ++ L+ GV+ TT F QG T RWG+AWSF A
Sbjct: 255 RNYDQILRILKGRGVSNFTTTRFCQGNTTRWGVAWSFSSEA 295
>gi|403057109|ref|YP_006645326.1| SAM-dependent methyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804435|gb|AFR02073.1| putative SAM-dependent methyltransferase [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 311
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 170/349 (48%), Gaps = 69/349 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L YP+ PFV + G +D+ + A + L + LL H + +
Sbjct: 11 LHPRNRHRDRY-DFPALKQSYPALIPFVKVNAYGDESVDFANPEAVKTLNQALLQHFYQI 69
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL+ + R+ + D+G GANCIYPL+G
Sbjct: 70 EHWTIPEGFLCPPIPGRADYIHHLADLLAEDNRSVVPRDASVL---DVGCGANCIYPLIG 126
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW F GS++ A++ A + +++NP ++ I +R+ NS++
Sbjct: 127 HREYGWRFTGSEINPQAMKAANETIEANPGLNRSIRLRRQKNSKA--------------- 171
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+L G++ + FD +CNPPF S
Sbjct: 172 ------------------------------------ILAGIIHKNDTFDAVMCNPPFHAS 195
Query: 255 MEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
E+A GL+ ++ + GG +E+ C GGE AFI ++I++SV + W+T
Sbjct: 196 AEDARQGSQRKLHNLGLDKRSPLNFGGQQDELWCEGGESAFIGQMIKESVGFARQCLWFT 255
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
S+V RK NL + L V V+T + QGQ +AWSF+ A +
Sbjct: 256 SLVSRKENLPEIYRALEAVDAEKVRTIDMAQGQKQSRFVAWSFLDTAAR 304
>gi|380484932|emb|CCF39686.1| hypothetical protein CH063_10456 [Colletotrichum higginsianum]
Length = 468
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 181/383 (47%), Gaps = 86/383 (22%)
Query: 10 REERPTIHP----KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
R ++P H +N YS PDF P+F + R +D+ D A +LT
Sbjct: 36 RPQQPGTHADAYYRNLYS-TEPDFNNFGRQDPAFGAML-----KRGTLDFDDPAAVMQLT 89
Query: 66 RVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG 125
+ LL D GL +P+ +LCP VPNR NYI W++ LL S R K G DIGTG
Sbjct: 90 KTLLRIDFGLGIELPEDRLCPPVPNRHNYILWLKGLLDSTTYDDPDR---KSVGLDIGTG 146
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
A+CIYPLLG + WSF +D+ L +A KNV+SN + +
Sbjct: 147 ASCIYPLLGCTQRLWSFFATDIDQKNLAYARKNVQSNNLHNRI----------------- 189
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
S+ ++ QD P+L ++ F
Sbjct: 190 SVVARTAQD-----------------------------------PILSLDSLGVDELSFV 214
Query: 246 ICNPPFF-------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+CNPPF+ ES ++ P T+C G P EMV GGE +F+ +++E+S+ L+ +
Sbjct: 215 MCNPPFYTSEEDLLESAQKKSRPPLTACTGAPVEMVTDGGEVSFVGKMLEESLVLRDRVQ 274
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PARKI---- 351
WYTSM G++S+L+ ++ LR+ + TEFVQG +T RW +AWSF P P+ ++
Sbjct: 275 WYTSMFGKQSSLEEFVNILREKAIDNYAVTEFVQGNKTRRWAVAWSFGPMRPSEEVARGL 334
Query: 352 -------ISPHVAEKKNLSFMLE 367
I P E + +SF L+
Sbjct: 335 KAATWKKILPMAVESEVVSFPLD 357
>gi|377577370|ref|ZP_09806352.1| ribosomal RNA large subunit methyltransferase F [Escherichia
hermannii NBRC 105704]
gi|377541108|dbj|GAB51517.1| ribosomal RNA large subunit methyltransferase F [Escherichia
hermannii NBRC 105704]
Length = 309
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 165/352 (46%), Gaps = 69/352 (19%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N++ +N DF L P FV S G ID+ D A + L + LL H
Sbjct: 4 KPGLHPRNRH-QNRYDFNALQQDCPELTAFVRQSPAGEATIDFADPAAVKTLNKALLAHH 62
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + NW IPDG LCP VP R++Y+H + DLL+ + RN + DIG GANCIYP
Sbjct: 63 YQVKNWDIPDGFLCPPVPGRADYVHHLADLLAQDHNDVVPRNATVL---DIGVGANCIYP 119
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G GW F GS++ D AL+ A + +NP +++ I +R+ + TP
Sbjct: 120 LIGHHEYGWRFTGSEVNDEALKSANAIILANPGLNKAIRLRR----QKTPD--------- 166
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G++ E +D +CNPPF
Sbjct: 167 --------------------------------------AILNGIIHKNEYYDAVMCNPPF 188
Query: 252 FESM---------EEAGLNPKTSC----GGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+S + L K S GG +E+ C GGE AFIT +I++S A +
Sbjct: 189 HDSQASAAASSERKRRNLGLKESAQLNFGGQQQELWCDGGEVAFITTLIKESKAFARQVT 248
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V + NL L L++ GV V E QGQ +AW+F A++
Sbjct: 249 WFTSLVSKGDNLPDLYRALQQAGVVKVVKVEMSQGQKQSRFIAWTFQDDAQR 300
>gi|347538861|ref|YP_004846285.1| putative SAM-dependent methyltransferase [Pseudogulbenkiania sp.
NH8B]
gi|345642038|dbj|BAK75871.1| putative SAM-dependent methyltransferase [Pseudogulbenkiania sp.
NH8B]
Length = 318
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 167/353 (47%), Gaps = 79/353 (22%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N + + DFA L + P PFV + G +D+ D A + L R LL H
Sbjct: 10 KPGLHPRNAHRQRY-DFAALIAACPDLAPFVARNAHGDDSVDFADPAAVKMLNRALLAHH 68
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD----KVKGFDIGTGAN 127
+G+ W IP G LCP +P R++YIH + DLL+++ NG +V D+G GAN
Sbjct: 69 YGIAHWDIPPGYLCPPIPGRADYIHHLADLLAAS-------NGGALPARVNVLDVGVGAN 121
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
C+YP++G ++ GW FVGSD+ +AL A+ V +NP ++ + +R+
Sbjct: 122 CVYPIIGRAVYGWRFVGSDIDPLALRSAQAIVDANPVLAGAVRLRR-------------- 167
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+SS N V GV++ ++FD +C
Sbjct: 168 ------------------------QASSAN-------------VFRGVIKRDDRFDLTLC 190
Query: 248 NPPFFESMEEA------------GLNPKTSC---GGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S +EA G P + GG E+ C GGE F+ ++ +S
Sbjct: 191 NPPFHASAQEAEAGTRRKLTNLSGKRPAKTVLNFGGQHAELWCDGGEAGFLRTMVSESAG 250
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W++S+V +++NL L L++ G V+T QGQ +AWS++
Sbjct: 251 FARQCCWFSSLVSKEANLPGLYRALKQAGARRVETIAMAQGQKTSRLVAWSYL 303
>gi|395800350|ref|ZP_10479626.1| 23S rRNA mA1618 methyltransferase [Flavobacterium sp. F52]
gi|395437523|gb|EJG03441.1| 23S rRNA mA1618 methyltransferase [Flavobacterium sp. F52]
Length = 318
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 173/362 (47%), Gaps = 77/362 (21%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
K + ++ +HP+N + N DF L S P + F+F ++ G ID+++ A +
Sbjct: 2 KMKAENNSQKDNLHPRNLH-RNRYDFEKLISNCPELKAFIFINKHGIETIDFSNPLAVKT 60
Query: 64 LTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKG 119
L + LL + + NW IP LCP +P R++YIH+I DLL+ +N IP TS V G
Sbjct: 61 LNKALLQTYYNIQNWDIPKNYLCPPIPGRADYIHYIADLLAESNNNQIPETST----VLG 116
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIGTG+N IYP+LG S+ WSFVG+D+ ++E K +++NP + + I ++
Sbjct: 117 LDIGTGSNLIYPILGNSIYNWSFVGTDIDKKSIENCTKIIEANPKLIDSISLQ------- 169
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
++ EP + ++
Sbjct: 170 --------------------------QQKEPRF------------------IFKNIITPE 185
Query: 240 EQFDFCICNPPFFESMEEA---------GLNPK--------TSCGGTPEEMVCSGGERAF 282
++F F +CNPPF S EEA LNPK + GG E+ C+GGE F
Sbjct: 186 DRFTFTMCNPPFHASAEEANKSASRKTSNLNPKEKKSANPVLNFGGQNAELWCNGGEIGF 245
Query: 283 ITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAW 342
IT++I +S W+T++V +K NL + L+KV T VKT E QGQ +AW
Sbjct: 246 ITQMIYESSKYPSQVLWFTTLVSKKENLASIYKILKKVNATSVKTIEMSQGQKNSRIVAW 305
Query: 343 SF 344
SF
Sbjct: 306 SF 307
>gi|26987712|ref|NP_743137.1| SAM-dependent methyltransferase [Pseudomonas putida KT2440]
gi|81442022|sp|Q88P77.1|RLMF_PSEPK RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|24982399|gb|AAN66601.1|AE016287_12 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 317
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 166/356 (46%), Gaps = 72/356 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 5 KPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKAQ 63
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ W IP LCP +P R++YIH DLL+ + R G +V+ DIG GANCIYP
Sbjct: 64 YGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGDVPR-GAQVRALDIGVGANCIYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 123 LLGYSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAITLRQQANRAH------------ 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G++++GE+FD +CNPPF
Sbjct: 170 ---------------------------------------ILSGLLQEGERFDLTLCNPPF 190
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S +EA P + GG E+ C GGE F+T++I +SV
Sbjct: 191 HASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVTQLIGESVQYA 250
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ W+TS+V + SNL + + L+K G V+ E QGQ +AWSF+ A +
Sbjct: 251 ERVLWFTSLVSKASNLPGIEAALKKSGAKAVRIIEMGQGQKQSRMVAWSFLDDAAR 306
>gi|383936680|ref|ZP_09990102.1| 23S rRNA (adenine1618-N6)-methyltransferase [Rheinheimera
nanhaiensis E407-8]
gi|383702227|dbj|GAB60193.1| 23S rRNA (adenine1618-N6)-methyltransferase [Rheinheimera
nanhaiensis E407-8]
Length = 309
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 168/354 (47%), Gaps = 74/354 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DFA L P+ FV DG I+++D +A L + LL H + +
Sbjct: 7 LHPRNLH-QGKYDFAALIKAQPALAAFVLTKADGEQSINFSDNSAVVALNQALLAHYYQV 65
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSS--NIIPTTSRNGDKVKGFDIGTGANCIYPL 132
+W +P G LCP VP R++Y+H++ DLL+ N+IP +G +V DIGTGAN IYP+
Sbjct: 66 KFWQLPAGYLCPPVPGRADYVHYLADLLAGKDNVIP----HGKQVTLVDIGTGANLIYPI 121
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+ +S GW +GSD+ VA++ A+ V SNP + + I + +
Sbjct: 122 IASSFYGWQVIGSDIDAVAVKAAQAIVASNPVLRGRVHIIRQQTAA-------------- 167
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ GV+ G+ +CNPPF+
Sbjct: 168 --------------------------------------IFAGVIAAGQFVHLTMCNPPFY 189
Query: 253 --------------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
++ + + + G P E+ C GGE AFI+++I +S+ KQ
Sbjct: 190 ASAAEASAASARKWANLAKTHSAQQRNFAGQPHELWCDGGELAFISQMINESLQFKQQVG 249
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII 352
W++S+V ++ +L L + L+ VG + E QGQ LAWSF+PP ++++
Sbjct: 250 WFSSLVSQQKHLTPLQALLKNVGAAQHRIIEMRQGQKVSRILAWSFLPPGQQLL 303
>gi|350596403|ref|XP_003361125.2| PREDICTED: methyltransferase-like protein 16-like [Sus scrofa]
Length = 553
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 156/301 (51%), Gaps = 64/301 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ + S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHH----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
EA G+N P + G E++ GGE F+ RII DS+ LK+ R G
Sbjct: 191 QLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRTQAGCEG 250
Query: 306 R 306
R
Sbjct: 251 R 251
>gi|227328392|ref|ZP_03832416.1| putative SAM-dependent methyltransferase [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 311
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 169/349 (48%), Gaps = 69/349 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L YP+ PFV + G +D+ + A + L + LL H + +
Sbjct: 11 LHPRNRHRDRY-DFPALKQSYPALIPFVKVNAYGDESVDFANPEAVKTLNQALLQHFYQI 69
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL+ + R+ + D+G GANCIYPL+G
Sbjct: 70 EHWTIPEGFLCPPIPGRADYIHHLADLLAEDNRSVVPRDASVL---DVGCGANCIYPLIG 126
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW F GS++ A++ A + +++NP ++ I +R+ NS++
Sbjct: 127 HREYGWRFTGSEINPQAMKAANETIEANPGLNRSIRLRRQKNSKA--------------- 171
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+L G++ + FD +CNPPF S
Sbjct: 172 ------------------------------------ILAGIIHKNDTFDAVMCNPPFHAS 195
Query: 255 MEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
E+A GL+ ++ + GG +E+ C GGE AFI ++I++S + W+T
Sbjct: 196 AEDARQGSQRKLHNLGLDKRSPLNFGGQQDELWCEGGESAFIGQMIKESAGFARQCLWFT 255
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
S+V RK NL + L V V+T + QGQ +AWSF+ A +
Sbjct: 256 SLVSRKENLPEIYRALEAVDAEKVRTIDMAQGQKQSRFVAWSFLDTAAR 304
>gi|421681493|ref|ZP_16121319.1| 23S rRNA methyltransferase [Shigella flexneri 1485-80]
gi|404341444|gb|EJZ67850.1| 23S rRNA methyltransferase [Shigella flexneri 1485-80]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G ID+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSIDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|431800991|ref|YP_007227894.1| 23S rRNA mA1618 methyltransferase [Pseudomonas putida HB3267]
gi|430791756|gb|AGA71951.1| 23S rRNA mA1618 methyltransferase [Pseudomonas putida HB3267]
Length = 317
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 5 KPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKAQ 63
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ W IP LCP +P R++YIH DLL+ + + G +V+ DIG GANCIYP
Sbjct: 64 YGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGEIPK-GAQVRALDIGVGANCIYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 123 LLGHSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAITLRQQANRAH------------ 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G++++GE+FD +CNPPF
Sbjct: 170 ---------------------------------------ILSGLLQEGERFDLTLCNPPF 190
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S +EA P + GG E+ C GGE F+++++ +SV
Sbjct: 191 HASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVSQLVSESVQYA 250
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V + SNL + + LRK G V+ +E QGQ +AWSF
Sbjct: 251 ERVLWFTSLVSKASNLPGIEAALRKAGAKAVRISEMGQGQKQSRMVAWSF 300
>gi|50119706|ref|YP_048873.1| SAM-dependent methyltransferase [Pectobacterium atrosepticum
SCRI1043]
gi|81646139|sp|Q6D958.1|RLMF_ERWCT RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|49610232|emb|CAG73675.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 311
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 173/353 (49%), Gaps = 69/353 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ + DF L YP+ PFV + G +D+ + A + L + LL H
Sbjct: 7 QKSGLHPRNRHRDRY-DFPALKQSYPALIPFVKVNAYGDESVDFANPEAVKTLNQALLQH 65
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + +W IPDG LCP +P R++Y+H + DLL+ + R+ + D+G GANC+Y
Sbjct: 66 FYQIEHWTIPDGFLCPPIPGRADYVHHLADLLAEDNRSVVPRDASVL---DVGCGANCVY 122
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS++ +A++ A + +++N ++ I +R+ NS++
Sbjct: 123 PLIGHREYGWRFTGSEVNPLAMKAANETIEANSGLNRSIRLRRQKNSKA----------- 171
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ + FD +CNPP
Sbjct: 172 ----------------------------------------ILAGIIHKNDSFDAVMCNPP 191
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S E+A GL+ ++ + GG +E+ C GGE AFI ++I+DSV+ +
Sbjct: 192 FHASAEDAREGSQRKLHNLGLDKRSPLNFGGQQDELWCEGGELAFIGQMIKDSVSFGRQC 251
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V RK +L + L V V+T + QGQ +AWSF+ A +
Sbjct: 252 LWFTSLVSRKEHLPEIYRALEAVDAEKVRTIDMAQGQKQSRFVAWSFLDTAAR 304
>gi|419952224|ref|ZP_14468398.1| putative SAM-dependent methyltransferase [Escherichia coli CUMT8]
gi|432966904|ref|ZP_20155820.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE203]
gi|388412933|gb|EIL72959.1| putative SAM-dependent methyltransferase [Escherichia coli CUMT8]
gi|431472876|gb|ELH52710.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE203]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWEIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|417144901|ref|ZP_11986707.1| rRNA adenine N-6-methyltransferase [Escherichia coli 1.2264]
gi|422775377|ref|ZP_16829033.1| ribosomal RNA large methyltransferase F [Escherichia coli H120]
gi|433091134|ref|ZP_20277430.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE138]
gi|323947035|gb|EGB43048.1| ribosomal RNA large methyltransferase F [Escherichia coli H120]
gi|386164784|gb|EIH26570.1| rRNA adenine N-6-methyltransferase [Escherichia coli 1.2264]
gi|431613766|gb|ELI82935.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE138]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTLAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|392585394|gb|EIW74733.1| hypothetical protein CONPUDRAFT_169696 [Coniophora puteana
RWD-64-598 SS2]
Length = 445
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 181/382 (47%), Gaps = 64/382 (16%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N+Y+ PPDF LA YP P+VF + D +D+ + +A R LT LL D L
Sbjct: 1 MHPRNRYN-TPPDFTSLAKRYPPLRPYVFINEDNVAILDFQNIDAQRRLTEALLHCDFNL 59
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ + +LCP VPNR NYI WI+D++ S +P V+G D+GTGA+ IYPLL
Sbjct: 60 KITLMEDRLCPPVPNRLNYILWIQDIIRSCDLPER-----PVRGIDVGTGASAIYPLLAC 114
Query: 136 SL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
S+ W VG ++ D + A +NV +N ++S+ I+IR S+ + D
Sbjct: 115 SMDPSWHMVGLEIDDESARCALQNVAAN-NLSDRIDIRM--------SVLDGPIFALFDD 165
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
++D P S+ + A+ +GP
Sbjct: 166 --DLDTQYDFTMCNPPFYGSAQEIAESAEGKLYGP------------------------- 198
Query: 255 MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLI 314
++ C G EMV GGE AF+++++ +SV K RW+TSM+G+ S++ +I
Sbjct: 199 --------RSVCSGAAVEMVTPGGEVAFVSQMVRESVQHKTRCRWFTSMLGKLSSVSVVI 250
Query: 315 SKLRKVGVTIVKTTEFVQGQTCRWGLAWSF-------------VPPARKIISPHVAEKKN 361
++ +G+ TEFVQGQT RW + WSF P +K + PH +
Sbjct: 251 ELIKALGIDNYGITEFVQGQTRRWAVVWSFGRERLPDSITRIRNPSLQKHMPPHNCLYQP 310
Query: 362 LSFMLEGVQRQFSALDVLQSIE 383
S Q Q + VL +IE
Sbjct: 311 FSSEHTVTQLQDAVQRVLDAIE 332
>gi|422970705|ref|ZP_16974217.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TA124]
gi|432717847|ref|ZP_19952842.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE9]
gi|432792022|ref|ZP_20026112.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE78]
gi|432797985|ref|ZP_20032010.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE79]
gi|371600143|gb|EHN88920.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TA124]
gi|431265526|gb|ELF57090.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE9]
gi|431341604|gb|ELG28610.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE78]
gi|431345007|gb|ELG31939.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE79]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDNALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|194438473|ref|ZP_03070563.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|251784326|ref|YP_002998630.1| 23S rRNA m[6]A1618 methyltransferase [Escherichia coli BL21(DE3)]
gi|253774190|ref|YP_003037021.1| SAM-dependent methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160884|ref|YP_003043992.1| putative SAM-dependent methyltransferase [Escherichia coli B str.
REL606]
gi|254287698|ref|YP_003053446.1| SAM-dependent methyltransferase [Escherichia coli BL21(DE3)]
gi|297517221|ref|ZP_06935607.1| putative SAM-dependent methyltransferase [Escherichia coli OP50]
gi|300929390|ref|ZP_07144860.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|422785397|ref|ZP_16838136.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H489]
gi|442599470|ref|ZP_21017188.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|194422697|gb|EDX38694.1| conserved hypothetical protein [Escherichia coli 101-1]
gi|242376599|emb|CAQ31308.1| 23S rRNA m[6]A1618 methyltransferase [Escherichia coli BL21(DE3)]
gi|253325234|gb|ACT29836.1| rRNA (adenine-N(6)-)-methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972785|gb|ACT38456.1| predicted SAM-dependent methyltransferase [Escherichia coli B str.
REL606]
gi|253977005|gb|ACT42675.1| predicted SAM-dependent methyltransferase [Escherichia coli
BL21(DE3)]
gi|300462655|gb|EFK26148.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|323963054|gb|EGB58625.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H489]
gi|441651740|emb|CCQ02685.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A+L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLAMLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + SNP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|421524367|ref|ZP_15970990.1| 23S rRNA mA1618 methyltransferase [Pseudomonas putida LS46]
gi|402751796|gb|EJX12307.1| 23S rRNA mA1618 methyltransferase [Pseudomonas putida LS46]
Length = 317
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 163/350 (46%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 5 KPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKAQ 63
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ W IP LCP +P R++YIH DLL+ + R G +V+ D+G GANCIYP
Sbjct: 64 YGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGDVPR-GAQVRALDVGVGANCIYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 123 LLGHSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAITLRQQANRAH------------ 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G++++GE+FD +CNPPF
Sbjct: 170 ---------------------------------------ILSGLLQEGERFDLTLCNPPF 190
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S +EA P + GG E+ C GGE F+T++I +SV
Sbjct: 191 HASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVTQLIGESVQYA 250
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V + SNL + + L+K G V+ E QGQ +AWSF
Sbjct: 251 ERVLWFTSLVSKASNLPGIEAALKKSGAKAVRIIEMGQGQKQSRMVAWSF 300
>gi|386010637|ref|YP_005928914.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas putida
BIRD-1]
gi|313497343|gb|ADR58709.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas putida
BIRD-1]
Length = 317
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 163/350 (46%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 5 KPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKAQ 63
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ W IP LCP +P R++YIH DLL+ + R G +V+ DIG GANCIYP
Sbjct: 64 YGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGDVPR-GAQVRALDIGVGANCIYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 123 LLGYSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAITLRQQANRAH------------ 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G++++GE+FD +CNPPF
Sbjct: 170 ---------------------------------------ILSGLLQEGERFDLTLCNPPF 190
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S +EA P + GG E+ C GGE F+T++I +SV
Sbjct: 191 HASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVTQLIGESVQYA 250
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V + SNL + + L+K G V+ E QGQ +AWSF
Sbjct: 251 ERVLWFTSLVSKASNLPGIEAALKKSGAKAVRIIEMGQGQKQSRMVAWSF 300
>gi|440744450|ref|ZP_20923753.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae BRIP39023]
gi|440373868|gb|ELQ10611.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae BRIP39023]
Length = 328
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 175/365 (47%), Gaps = 80/365 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DFA L P FV + G+ ID+ + A R R LL
Sbjct: 23 EKATLHPRNRH-QGQYDFAKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLKA 81
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGAN
Sbjct: 82 FYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGAN 137
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ N +
Sbjct: 138 CIYPLLGHSDYGWQFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQGNRKQ-------- 188
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L+G++ E+F +C
Sbjct: 189 -------------------------------------------ILLGLLDSSERFHVSLC 205
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S+EEA P + GG +E+ C GGE F+T++I++S
Sbjct: 206 NPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTQLIQES 265
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W++++V + SNL + S L+K G VK E QGQ +AW+F+ A++
Sbjct: 266 ATLPGQVVWFSTLVSKASNLPPIQSALKKAGALEVKVVEMGQGQKQSRFVAWTFLDKAQR 325
Query: 351 IISPH 355
+PH
Sbjct: 326 --TPH 328
>gi|432601342|ref|ZP_19837591.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE66]
gi|431143175|gb|ELE44913.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE66]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANSLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGSIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDNALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|407468280|ref|YP_006785278.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407482988|ref|YP_006780137.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
2011C-3493]
gi|410483539|ref|YP_006771085.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|417831938|ref|ZP_12478459.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
01-09591]
gi|417864089|ref|ZP_12509136.1| hypothetical protein C22711_1023 [Escherichia coli O104:H4 str.
C227-11]
gi|422991541|ref|ZP_16982312.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. C227-11]
gi|422993483|ref|ZP_16984247.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. C236-11]
gi|422998694|ref|ZP_16989450.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 09-7901]
gi|423007155|ref|ZP_16997898.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 04-8351]
gi|423008801|ref|ZP_16999539.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-3677]
gi|423022989|ref|ZP_17013692.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4404]
gi|423028141|ref|ZP_17018834.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4522]
gi|423033975|ref|ZP_17024659.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4623]
gi|423036841|ref|ZP_17027515.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423041960|ref|ZP_17032627.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423048650|ref|ZP_17039307.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423052232|ref|ZP_17041040.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423059198|ref|ZP_17047994.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|429723032|ref|ZP_19257921.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429775206|ref|ZP_19307204.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02030]
gi|429780393|ref|ZP_19312343.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429784446|ref|ZP_19316355.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02092]
gi|429789783|ref|ZP_19321655.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02093]
gi|429796013|ref|ZP_19327836.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02281]
gi|429801938|ref|ZP_19333713.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02318]
gi|429805570|ref|ZP_19337314.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02913]
gi|429811166|ref|ZP_19342865.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-03439]
gi|429816517|ref|ZP_19348173.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-04080]
gi|429821725|ref|ZP_19353337.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-03943]
gi|429907394|ref|ZP_19373362.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429911595|ref|ZP_19377551.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429917430|ref|ZP_19383370.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429922468|ref|ZP_19388389.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429923321|ref|ZP_19389237.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429932216|ref|ZP_19398110.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429933818|ref|ZP_19399708.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429939477|ref|ZP_19405351.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429947119|ref|ZP_19412974.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429949751|ref|ZP_19415599.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429958029|ref|ZP_19423858.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec12-0466]
gi|340735594|gb|EGR64651.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
01-09591]
gi|341917378|gb|EGT66994.1| hypothetical protein C22711_1023 [Escherichia coli O104:H4 str.
C227-11]
gi|354856543|gb|EHF17001.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 04-8351]
gi|354857790|gb|EHF18243.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. C227-11]
gi|354864558|gb|EHF24987.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. C236-11]
gi|354874871|gb|EHF35237.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 09-7901]
gi|354878831|gb|EHF39178.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4404]
gi|354882623|gb|EHF42945.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-3677]
gi|354884245|gb|EHF44558.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4522]
gi|354887302|gb|EHF47577.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4623]
gi|354900497|gb|EHF60631.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354903642|gb|EHF63742.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354906005|gb|EHF66087.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354916922|gb|EHF76892.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354920983|gb|EHF80908.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|406778701|gb|AFS58125.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055285|gb|AFS75336.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064315|gb|AFS85362.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|429349941|gb|EKY86676.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02030]
gi|429350895|gb|EKY87618.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429351031|gb|EKY87752.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02092]
gi|429365309|gb|EKZ01922.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02093]
gi|429366260|gb|EKZ02863.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02281]
gi|429368823|gb|EKZ05406.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02318]
gi|429381230|gb|EKZ17717.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-02913]
gi|429382198|gb|EKZ18663.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-03439]
gi|429383633|gb|EKZ20092.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-03943]
gi|429395464|gb|EKZ31830.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. 11-04080]
gi|429396678|gb|EKZ33026.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429397556|gb|EKZ33902.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429409284|gb|EKZ45514.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429417744|gb|EKZ53891.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421413|gb|EKZ57534.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429423153|gb|EKZ59261.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429427155|gb|EKZ63240.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429434037|gb|EKZ70066.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429438024|gb|EKZ74018.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429443380|gb|EKZ79332.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429449483|gb|EKZ85382.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec12-0466]
gi|429455359|gb|EKZ91215.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
O104:H4 str. Ec11-9941]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQINPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|387606359|ref|YP_006095215.1| hypothetical protein EC042_0897 [Escherichia coli 042]
gi|417307255|ref|ZP_12094127.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
PCN033]
gi|432873848|ref|ZP_20093116.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE147]
gi|284920659|emb|CBG33722.1| conserved hypothetical protein [Escherichia coli 042]
gi|338771126|gb|EGP25874.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
PCN033]
gi|431404443|gb|ELG87694.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE147]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP +S I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLSRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPK--TSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDVLNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|397694712|ref|YP_006532593.1| ribosomal RNA large subunit methyltransferase F [Pseudomonas putida
DOT-T1E]
gi|397331442|gb|AFO47801.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas putida
DOT-T1E]
Length = 317
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 163/350 (46%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 5 KPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKAQ 63
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ W IP LCP +P R++YIH DLL+ + R G +V+ D+G GANCIYP
Sbjct: 64 YGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGDVPR-GAQVRALDVGVGANCIYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 123 LLGHSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAITLRQQANRAH------------ 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G++++GE+FD +CNPPF
Sbjct: 170 ---------------------------------------ILSGLLQEGERFDLTLCNPPF 190
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S +EA P + GG E+ C GGE F+T++I +SV
Sbjct: 191 HASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVTQLIGESVQYA 250
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V + SNL + + L+K G V+ E QGQ +AWSF
Sbjct: 251 ERVLWFTSLVSKASNLPGIEAALKKSGAKAVRIIEMGQGQKQSRMVAWSF 300
>gi|148546257|ref|YP_001266359.1| putative SAM-dependent methyltransferase [Pseudomonas putida F1]
gi|395447427|ref|YP_006387680.1| putative SAM-dependent methyltransferase [Pseudomonas putida ND6]
gi|205829567|sp|A5VZ65.1|RLMF_PSEP1 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|148510315|gb|ABQ77175.1| 23S rRNA m(6)A-1618 methyltransferase [Pseudomonas putida F1]
gi|388561424|gb|AFK70565.1| putative SAM-dependent methyltransferase [Pseudomonas putida ND6]
Length = 317
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 163/350 (46%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 5 KPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKAQ 63
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ W IP LCP +P R++YIH DLL+ + R G +V+ D+G GANCIYP
Sbjct: 64 YGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGDVPR-GTQVRALDVGVGANCIYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 123 LLGHSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAITLRQQANRAH------------ 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G++++GE+FD +CNPPF
Sbjct: 170 ---------------------------------------ILSGLLQEGERFDLTLCNPPF 190
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S +EA P + GG E+ C GGE F+T++I +SV
Sbjct: 191 HASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVTQLIGESVQYA 250
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V + SNL + + L+K G V+ E QGQ +AWSF
Sbjct: 251 ERVLWFTSLVSKASNLPGIEAALKKSGAKAVRIIEMGQGQKQSRMVAWSF 300
>gi|345480413|ref|XP_001607348.2| PREDICTED: methyltransferase-like protein 16-like [Nasonia
vitripennis]
Length = 520
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 167/341 (48%), Gaps = 63/341 (18%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +H +NKY E P +F LA LYP F G+ +I++ D + + LT+ LL HD
Sbjct: 4 RKFMHKRNKYKEEP-NFKQLAILYPGFRKIAVTDIAGKVKINFKDVESLKILTKTLLKHD 62
Query: 73 HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
L+ IP L P +P R NYI WIEDLL+ I S V G DIGTGA CIYP+
Sbjct: 63 FNLDVDIPPNHLVPALPLRLNYILWIEDLLNHCGIQDLST----VHGLDIGTGAICIYPI 118
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L ++L +D+ ++ A +N++ N ++ +LIE+ + +ES+ +++
Sbjct: 119 LFSNLYKTKMTCTDIDPKSIISATENIEKN-NLQDLIEVILIK--------KESILKEAL 169
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ E++ F +CNPPFF
Sbjct: 170 E--------------------------------------------KNEKYSFVMCNPPFF 185
Query: 253 ESMEEAGLN-----PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
E+ + G P+ + G E+ GGER FI R+IE+S+ K + YT+M G+K
Sbjct: 186 ETDKGLGKKSKQEPPRNAPTGNANELEVKGGEREFILRLIEESLEYKHKIKIYTTMFGQK 245
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
S+L FL ++L K + TEF QG T RWG+AW+F P +
Sbjct: 246 SSLAFLRNELTKKRIFNATWTEFCQGFTKRWGIAWTFEPKS 286
>gi|74311350|ref|YP_309769.1| SAM-dependent methyltransferase [Shigella sonnei Ss046]
gi|82543252|ref|YP_407199.1| SAM-dependent methyltransferase [Shigella boydii Sb227]
gi|157155334|ref|YP_001462001.1| SAM-dependent methyltransferase [Escherichia coli E24377A]
gi|187731986|ref|YP_001881006.1| putative SAM-dependent methyltransferase [Shigella boydii CDC
3083-94]
gi|209918054|ref|YP_002292138.1| putative SAM-dependent methyltransferase [Escherichia coli SE11]
gi|331676545|ref|ZP_08377241.1| putative methyltransferase YbiN [Escherichia coli H591]
gi|332282349|ref|ZP_08394762.1| conserved hypothetical protein [Shigella sp. D9]
gi|419807569|ref|ZP_14332614.1| putative methyltransferase YbiN [Escherichia coli AI27]
gi|73854827|gb|AAZ87534.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81244663|gb|ABB65371.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|157077364|gb|ABV17072.1| conserved hypothetical protein [Escherichia coli E24377A]
gi|187428978|gb|ACD08252.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
gi|209911313|dbj|BAG76387.1| conserved hypothetical protein [Escherichia coli SE11]
gi|331075234|gb|EGI46532.1| putative methyltransferase YbiN [Escherichia coli H591]
gi|332104701|gb|EGJ08047.1| conserved hypothetical protein [Shigella sp. D9]
gi|384469435|gb|EIE53601.1| putative methyltransferase YbiN [Escherichia coli AI27]
Length = 335
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|331656828|ref|ZP_08357790.1| putative methyltransferase YbiN [Escherichia coli TA206]
gi|331055076|gb|EGI27085.1| putative methyltransferase YbiN [Escherichia coli TA206]
Length = 308
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEKSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|293409183|ref|ZP_06652759.1| SAM-dependent methyltransferase [Escherichia coli B354]
gi|291469651|gb|EFF12135.1| SAM-dependent methyltransferase [Escherichia coli B354]
Length = 308
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSCAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|365848684|ref|ZP_09389156.1| rRNA adenine N-6-methyltransferase [Yokenella regensburgei ATCC
43003]
gi|364570264|gb|EHM47882.1| rRNA adenine N-6-methyltransferase [Yokenella regensburgei ATCC
43003]
Length = 308
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 166/352 (47%), Gaps = 74/352 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++ +HP+N++ +N D L + P+ PF+ + G I++ D A + L + LL
Sbjct: 2 KAQKSGLHPRNRH-QNRYDLTELCAANPALRPFLTLNPAGEQTINFADPQAVKALNQALL 60
Query: 70 LHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
H +G+ +W IP+G LCP VP R++Y+H + DLL+ RN + DIGTGANC
Sbjct: 61 SHFYGVASWDIPEGFLCPPVPGRADYVHHLADLLAE-AAGEVPRNASVL---DIGTGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+GA GW F GS++ AL A+ V N +S I +R+ ++E+
Sbjct: 117 IYPLIGAHEYGWRFTGSEVNAQALASAQAIVNGNTGLSRQIRLRRQKSAEA--------- 167
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+LVG++ EQ+D +CN
Sbjct: 168 ------------------------------------------ILVGIIHKNEQYDATMCN 185
Query: 249 PPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF +S EA + + + GG +E+ C GGE AFI+++I +S
Sbjct: 186 PPFHDS--EAAVRQGSERKRRNLGQDKDDAANFGGQQQELWCEGGEVAFISKMIAESQQF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W+TS+V R NL FL L + G V E QGQ +AWSF+
Sbjct: 244 GRQVMWFTSLVSRGDNLPFLYRALTEAGAVKVVKKEMSQGQKQSRFIAWSFM 295
>gi|110641011|ref|YP_668739.1| SAM-dependent methyltransferase [Escherichia coli 536]
gi|191166165|ref|ZP_03027999.1| conserved hypothetical protein [Escherichia coli B7A]
gi|191173748|ref|ZP_03035271.1| conserved hypothetical protein [Escherichia coli F11]
gi|193064493|ref|ZP_03045574.1| conserved hypothetical protein [Escherichia coli E22]
gi|193069326|ref|ZP_03050281.1| conserved hypothetical protein [Escherichia coli E110019]
gi|194428192|ref|ZP_03060735.1| conserved hypothetical protein [Escherichia coli B171]
gi|194433092|ref|ZP_03065374.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|218553393|ref|YP_002386306.1| putative SAM-dependent methyltransferase [Escherichia coli IAI1]
gi|218557712|ref|YP_002390625.1| SAM-dependent methyltransferase [Escherichia coli S88]
gi|218688593|ref|YP_002396805.1| putative SAM-dependent methyltransferase [Escherichia coli ED1a]
gi|218694281|ref|YP_002401948.1| SAM-dependent methyltransferase [Escherichia coli 55989]
gi|222155532|ref|YP_002555671.1| hypothetical protein LF82_2643 [Escherichia coli LF82]
gi|260843050|ref|YP_003220828.1| SAM-dependent methyltransferase [Escherichia coli O103:H2 str.
12009]
gi|260854099|ref|YP_003227990.1| SAM-dependent methyltransferase [Escherichia coli O26:H11 str.
11368]
gi|293433068|ref|ZP_06661496.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
B088]
gi|300816455|ref|ZP_07096677.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300824268|ref|ZP_07104385.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300920056|ref|ZP_07136514.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300992029|ref|ZP_07179761.1| hypothetical protein HMPREF9553_03975 [Escherichia coli MS 200-1]
gi|301020700|ref|ZP_07184768.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|306812791|ref|ZP_07446984.1| putative SAM-dependent methyltransferase [Escherichia coli NC101]
gi|307313783|ref|ZP_07593400.1| rRNA (adenine-N(6)-)-methyltransferase [Escherichia coli W]
gi|309798037|ref|ZP_07692413.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|331667176|ref|ZP_08368041.1| putative methyltransferase YbiN [Escherichia coli TA271]
gi|331682314|ref|ZP_08382933.1| putative methyltransferase YbiN [Escherichia coli H299]
gi|378713837|ref|YP_005278730.1| rRNA (adenine-N(6)-)-methyltransferase [Escherichia coli KO11FL]
gi|383177435|ref|YP_005455440.1| 23S rRNA mA1618 methyltransferase [Shigella sonnei 53G]
gi|386605299|ref|YP_006111599.1| putative SAM-dependent methyltransferase [Escherichia coli UM146]
gi|386608126|ref|YP_006123612.1| SAM-dependent methyltransferase [Escherichia coli W]
gi|386618256|ref|YP_006137836.1| putative SAM-dependent methyltransferase [Escherichia coli NA114]
gi|386702430|ref|YP_006166267.1| 23S rRNA mA1618 methyltransferase [Escherichia coli KO11FL]
gi|386708568|ref|YP_006172289.1| 23S rRNA mA1618 methyltransferase [Escherichia coli W]
gi|387616063|ref|YP_006119085.1| putative SAM-dependent methyltransferase [Escherichia coli O83:H1
str. NRG 857C]
gi|387828786|ref|YP_003348723.1| hypothetical protein ECSF_0733 [Escherichia coli SE15]
gi|414575055|ref|ZP_11432261.1| ribosomal RNA large subunit methyltransferase F [Shigella sonnei
3233-85]
gi|415785195|ref|ZP_11492815.1| hypothetical protein ECEPECA14_2385 [Escherichia coli EPECa14]
gi|415803135|ref|ZP_11500307.1| hypothetical protein ECE128010_4044 [Escherichia coli E128010]
gi|415827794|ref|ZP_11514563.1| hypothetical protein ECOK1357_1493 [Escherichia coli OK1357]
gi|415850235|ref|ZP_11527155.1| hypothetical protein SS53G_3934 [Shigella sonnei 53G]
gi|415875943|ref|ZP_11542563.1| putative methyltransferase YbiN [Escherichia coli MS 79-10]
gi|416259696|ref|ZP_11640042.1| Ribosomal RNA large subunit methyltransferase F [Shigella
dysenteriae CDC 74-1112]
gi|416335160|ref|ZP_11671871.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
WV_060327]
gi|417083300|ref|ZP_11951395.1| putative SAM-dependent methyltransferase [Escherichia coli
cloneA_i1]
gi|417120524|ref|ZP_11970082.1| rRNA adenine N-6-methyltransferase [Escherichia coli 97.0246]
gi|417137495|ref|ZP_11981285.1| rRNA adenine N-6-methyltransferase [Escherichia coli 97.0259]
gi|417152803|ref|ZP_11991594.1| rRNA adenine N-6-methyltransferase [Escherichia coli 96.0497]
gi|417161597|ref|ZP_11997833.1| rRNA adenine N-6-methyltransferase [Escherichia coli 99.0741]
gi|417177467|ref|ZP_12006948.1| rRNA adenine N-6-methyltransferase [Escherichia coli 3.2608]
gi|417180195|ref|ZP_12007903.1| rRNA adenine N-6-methyltransferase [Escherichia coli 93.0624]
gi|417224524|ref|ZP_12027815.1| rRNA adenine N-6-methyltransferase [Escherichia coli 96.154]
gi|417230154|ref|ZP_12031740.1| rRNA adenine N-6-methyltransferase [Escherichia coli 5.0959]
gi|417242551|ref|ZP_12037768.1| rRNA adenine N-6-methyltransferase [Escherichia coli 9.0111]
gi|417254828|ref|ZP_12046579.1| rRNA adenine N-6-methyltransferase [Escherichia coli 4.0967]
gi|417267645|ref|ZP_12055006.1| rRNA adenine N-6-methyltransferase [Escherichia coli 3.3884]
gi|417289088|ref|ZP_12076373.1| rRNA adenine N-6-methyltransferase [Escherichia coli TW07793]
gi|417294976|ref|ZP_12082232.1| rRNA adenine N-6-methyltransferase [Escherichia coli 900105 (10e)]
gi|417580072|ref|ZP_12230889.1| hypothetical protein ECSTECB2F1_0726 [Escherichia coli STEC_B2F1]
gi|417595806|ref|ZP_12246466.1| hypothetical protein EC30301_0943 [Escherichia coli 3030-1]
gi|417601142|ref|ZP_12251724.1| hypothetical protein ECSTEC94C_0934 [Escherichia coli STEC_94C]
gi|417622167|ref|ZP_12272491.1| hypothetical protein ECSTECH18_0923 [Escherichia coli STEC_H.1.8]
gi|417661333|ref|ZP_12310914.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
AA86]
gi|417665946|ref|ZP_12315508.1| hypothetical protein ECSTECO31_0754 [Escherichia coli STEC_O31]
gi|417672864|ref|ZP_12322323.1| hypothetical protein SD15574_2498 [Shigella dysenteriae 155-74]
gi|417680938|ref|ZP_12330317.1| hypothetical protein SB359474_0821 [Shigella boydii 3594-74]
gi|417690311|ref|ZP_12339535.1| hypothetical protein SB521682_2565 [Shigella boydii 5216-82]
gi|418042885|ref|ZP_12681068.1| putative SAM-dependent methyltransferase [Escherichia coli W26]
gi|418263083|ref|ZP_12884267.1| 23S rRNA methyltransferase [Shigella sonnei str. Moseley]
gi|418944670|ref|ZP_13497691.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H43 str.
T22]
gi|419207953|ref|ZP_13751076.1| 23S rRNA methyltransferase [Escherichia coli DEC8C]
gi|419214502|ref|ZP_13757524.1| 23S rRNA methyltransferase [Escherichia coli DEC8D]
gi|419225592|ref|ZP_13768475.1| 23S rRNA methyltransferase [Escherichia coli DEC9A]
gi|419231372|ref|ZP_13774161.1| 23S rRNA methyltransferase [Escherichia coli DEC9B]
gi|419236779|ref|ZP_13779522.1| 23S rRNA methyltransferase [Escherichia coli DEC9C]
gi|419242309|ref|ZP_13784956.1| 23S rRNA methyltransferase [Escherichia coli DEC9D]
gi|419247832|ref|ZP_13790439.1| 23S rRNA methyltransferase [Escherichia coli DEC9E]
gi|419253564|ref|ZP_13796103.1| 23S rRNA methyltransferase [Escherichia coli DEC10A]
gi|419259625|ref|ZP_13802069.1| 23S rRNA methyltransferase [Escherichia coli DEC10B]
gi|419265688|ref|ZP_13808069.1| 23S rRNA methyltransferase [Escherichia coli DEC10C]
gi|419271307|ref|ZP_13813631.1| 23S rRNA methyltransferase [Escherichia coli DEC10D]
gi|419277023|ref|ZP_13819284.1| 23S rRNA methyltransferase [Escherichia coli DEC10E]
gi|419282793|ref|ZP_13825005.1| 23S rRNA methyltransferase [Escherichia coli DEC10F]
gi|419288342|ref|ZP_13830452.1| 23S rRNA methyltransferase [Escherichia coli DEC11A]
gi|419293693|ref|ZP_13835748.1| 23S rRNA methyltransferase [Escherichia coli DEC11B]
gi|419299100|ref|ZP_13841113.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC11C]
gi|419305394|ref|ZP_13847304.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC11D]
gi|419310431|ref|ZP_13852302.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC11E]
gi|419315718|ref|ZP_13857542.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC12A]
gi|419321664|ref|ZP_13863396.1| 23S rRNA methyltransferase [Escherichia coli DEC12B]
gi|419327793|ref|ZP_13869421.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC12C]
gi|419333314|ref|ZP_13874870.1| 23S rRNA methyltransferase [Escherichia coli DEC12D]
gi|419338636|ref|ZP_13880121.1| 23S rRNA methyltransferase [Escherichia coli DEC12E]
gi|419344430|ref|ZP_13885812.1| 23S rRNA methyltransferase [Escherichia coli DEC13A]
gi|419348869|ref|ZP_13890222.1| 23S rRNA methyltransferase [Escherichia coli DEC13B]
gi|419353858|ref|ZP_13895140.1| 23S rRNA methyltransferase [Escherichia coli DEC13C]
gi|419359253|ref|ZP_13900478.1| 23S rRNA methyltransferase [Escherichia coli DEC13D]
gi|419364156|ref|ZP_13905335.1| 23S rRNA methyltransferase [Escherichia coli DEC13E]
gi|419369071|ref|ZP_13910198.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC14A]
gi|419374474|ref|ZP_13915525.1| 23S rRNA methyltransferase [Escherichia coli DEC14B]
gi|419379751|ref|ZP_13920726.1| 23S rRNA methyltransferase [Escherichia coli DEC14C]
gi|419384959|ref|ZP_13925858.1| 23S rRNA methyltransferase [Escherichia coli DEC14D]
gi|419390216|ref|ZP_13931050.1| 23S rRNA methyltransferase [Escherichia coli DEC15A]
gi|419395375|ref|ZP_13936157.1| 23S rRNA methyltransferase [Escherichia coli DEC15B]
gi|419400727|ref|ZP_13941458.1| 23S rRNA methyltransferase [Escherichia coli DEC15C]
gi|419405909|ref|ZP_13946611.1| 23S rRNA methyltransferase [Escherichia coli DEC15D]
gi|419411400|ref|ZP_13952069.1| 23S rRNA methyltransferase [Escherichia coli DEC15E]
gi|419870738|ref|ZP_14392830.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O103:H2 str.
CVM9450]
gi|419879074|ref|ZP_14400522.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|419885863|ref|ZP_14406526.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CVM9545]
gi|419904722|ref|ZP_14423711.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM9942]
gi|419911104|ref|ZP_14429605.1| SAM-dependent methyltransferase [Escherichia coli O26:H11 str.
CVM10026]
gi|419917877|ref|ZP_14436098.1| putative SAM-dependent methyltransferase [Escherichia coli KD2]
gi|419928770|ref|ZP_14446477.1| putative SAM-dependent methyltransferase [Escherichia coli 541-1]
gi|419945229|ref|ZP_14461681.1| putative SAM-dependent methyltransferase [Escherichia coli HM605]
gi|420112255|ref|ZP_14622057.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|420117904|ref|ZP_14627249.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM10021]
gi|420123970|ref|ZP_14632845.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM10030]
gi|420129739|ref|ZP_14638263.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM10224]
gi|420136065|ref|ZP_14644133.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM9952]
gi|420324523|ref|ZP_14826304.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
CCH060]
gi|420334977|ref|ZP_14836595.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
K-315]
gi|420347938|ref|ZP_14849332.1| ribosomal RNA large subunit methyltransferase F [Shigella boydii
965-58]
gi|420353547|ref|ZP_14854660.1| ribosomal RNA large subunit methyltransferase F [Shigella boydii
4444-74]
gi|420357538|ref|ZP_14858544.1| ribosomal RNA large subunit methyltransferase F [Shigella sonnei
3226-85]
gi|420362485|ref|ZP_14863401.1| 23S rRNA methyltransferase [Shigella sonnei 4822-66]
gi|420379096|ref|ZP_14878585.1| ribosomal RNA large subunit methyltransferase F [Shigella
dysenteriae 225-75]
gi|422353505|ref|ZP_16434258.1| hypothetical protein HMPREF9542_02828 [Escherichia coli MS 117-3]
gi|422358954|ref|ZP_16439603.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|422375601|ref|ZP_16455864.1| hypothetical protein HMPREF9533_02877 [Escherichia coli MS 60-1]
gi|422748187|ref|ZP_16802100.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H252]
gi|422753413|ref|ZP_16807240.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H263]
gi|422839270|ref|ZP_16887242.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H397]
gi|423708728|ref|ZP_17683106.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
B799]
gi|424747868|ref|ZP_18176024.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424760645|ref|ZP_18188255.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425299073|ref|ZP_18689115.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
07798]
gi|425377713|ref|ZP_18762080.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1865]
gi|425421399|ref|ZP_18802606.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
0.1288]
gi|432357093|ref|ZP_19600338.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE4]
gi|432361564|ref|ZP_19604748.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE5]
gi|432375915|ref|ZP_19618923.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE12]
gi|432380431|ref|ZP_19623386.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE15]
gi|432386258|ref|ZP_19629154.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE16]
gi|432396689|ref|ZP_19639474.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE25]
gi|432405624|ref|ZP_19648344.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE28]
gi|432420883|ref|ZP_19663438.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE178]
gi|432464771|ref|ZP_19706877.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE205]
gi|432470176|ref|ZP_19712228.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE206]
gi|432480181|ref|ZP_19722143.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE210]
gi|432499019|ref|ZP_19740795.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE216]
gi|432513001|ref|ZP_19750236.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE224]
gi|432533031|ref|ZP_19770022.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE234]
gi|432552757|ref|ZP_19789487.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE47]
gi|432557789|ref|ZP_19794478.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE49]
gi|432572739|ref|ZP_19809230.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE55]
gi|432582864|ref|ZP_19819274.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE57]
gi|432587046|ref|ZP_19823416.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE58]
gi|432596687|ref|ZP_19832968.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE62]
gi|432610477|ref|ZP_19846648.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE72]
gi|432615635|ref|ZP_19851762.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE75]
gi|432645235|ref|ZP_19881034.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE86]
gi|432655033|ref|ZP_19890745.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE93]
gi|432673802|ref|ZP_19909291.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE142]
gi|432693559|ref|ZP_19928770.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE162]
gi|432698113|ref|ZP_19933279.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE169]
gi|432709606|ref|ZP_19944671.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE6]
gi|432712466|ref|ZP_19947515.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE8]
gi|432722319|ref|ZP_19957242.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE17]
gi|432726861|ref|ZP_19961742.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE18]
gi|432740547|ref|ZP_19975268.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE23]
gi|432744733|ref|ZP_19979432.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE43]
gi|432749240|ref|ZP_19983854.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE29]
gi|432753545|ref|ZP_19988111.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE22]
gi|432764128|ref|ZP_19998576.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE48]
gi|432777685|ref|ZP_20011935.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE59]
gi|432786473|ref|ZP_20020638.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE65]
gi|432801087|ref|ZP_20035072.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE84]
gi|432804908|ref|ZP_20038849.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE91]
gi|432820065|ref|ZP_20053778.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE118]
gi|432826281|ref|ZP_20059936.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE123]
gi|432830780|ref|ZP_20064363.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE135]
gi|432833888|ref|ZP_20067430.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE136]
gi|432849262|ref|ZP_20080484.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE144]
gi|432860551|ref|ZP_20085690.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE146]
gi|432893534|ref|ZP_20105546.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE165]
gi|432903345|ref|ZP_20112811.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE194]
gi|432918029|ref|ZP_20122434.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE173]
gi|432925319|ref|ZP_20127348.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE175]
gi|432933347|ref|ZP_20133015.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE184]
gi|432942857|ref|ZP_20140011.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE183]
gi|432970918|ref|ZP_20159796.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE207]
gi|432980280|ref|ZP_20169058.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE211]
gi|432984435|ref|ZP_20173172.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE215]
gi|432989860|ref|ZP_20178526.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE217]
gi|433004273|ref|ZP_20192711.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE227]
gi|433011482|ref|ZP_20199886.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE229]
gi|433037800|ref|ZP_20225412.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE113]
gi|433071858|ref|ZP_20258552.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE129]
gi|433076967|ref|ZP_20263529.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE131]
gi|433081688|ref|ZP_20268162.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE133]
gi|433095702|ref|ZP_20281913.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE139]
gi|433100317|ref|ZP_20286424.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE145]
gi|433104912|ref|ZP_20290930.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE148]
gi|433110082|ref|ZP_20295956.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE150]
gi|433119356|ref|ZP_20305063.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE157]
gi|433143383|ref|ZP_20328549.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE168]
gi|433152898|ref|ZP_20337864.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE176]
gi|433162597|ref|ZP_20347356.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE179]
gi|433167606|ref|ZP_20352273.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE180]
gi|433182345|ref|ZP_20366640.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE85]
gi|433187592|ref|ZP_20371709.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE88]
gi|433192773|ref|ZP_20376786.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE90]
gi|433197368|ref|ZP_20381290.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE94]
gi|450186657|ref|ZP_21889575.1| 23S rRNA mA1618 methyltransferase [Escherichia coli SEPT362]
gi|123344205|sp|Q0TJP1.1|RLMF_ECOL5 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829586|sp|Q1REB8.2|RLMF_ECOUT RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829587|sp|A1A947.2|RLMF_ECOK1 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829594|sp|A7ZJM2.2|RLMF_ECO24 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829725|sp|B2TVC2.2|RLMF_SHIB3 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829726|sp|Q323Y7.2|RLMF_SHIBS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829730|sp|Q3Z3X8.2|RLMF_SHISS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807079|sp|B7MGR5.1|RLMF_ECO45 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807080|sp|B7LC90.1|RLMF_ECO55 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807083|sp|B7MQR1.1|RLMF_ECO81 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807084|sp|B7M782.1|RLMF_ECO8A RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|110342603|gb|ABG68840.1| hypothetical protein YbiN [Escherichia coli 536]
gi|190903774|gb|EDV63489.1| conserved hypothetical protein [Escherichia coli B7A]
gi|190905998|gb|EDV65614.1| conserved hypothetical protein [Escherichia coli F11]
gi|192928955|gb|EDV82568.1| conserved hypothetical protein [Escherichia coli E22]
gi|192957279|gb|EDV87727.1| conserved hypothetical protein [Escherichia coli E110019]
gi|194413752|gb|EDX30031.1| conserved hypothetical protein [Escherichia coli B171]
gi|194418589|gb|EDX34676.1| conserved hypothetical protein [Shigella dysenteriae 1012]
gi|218351013|emb|CAU96717.1| putative AdoMet-dependent methyltransferase [Escherichia coli
55989]
gi|218360161|emb|CAQ97710.1| putative AdoMet-dependent methyltransferase [Escherichia coli IAI1]
gi|218364481|emb|CAR02163.1| putative AdoMet-dependent methyltransferase [Escherichia coli S88]
gi|218426157|emb|CAR06977.1| putative AdoMet-dependent methyltransferase [Escherichia coli ED1a]
gi|222032537|emb|CAP75276.1| UPF0049 protein ybiN [Escherichia coli LF82]
gi|257752748|dbj|BAI24250.1| predicted SAM-dependent methyltransferase [Escherichia coli O26:H11
str. 11368]
gi|257758197|dbj|BAI29694.1| predicted SAM-dependent methyltransferase [Escherichia coli O103:H2
str. 12009]
gi|281177943|dbj|BAI54273.1| conserved hypothetical protein [Escherichia coli SE15]
gi|291323887|gb|EFE63309.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
B088]
gi|300305428|gb|EFJ59948.1| hypothetical protein HMPREF9553_03975 [Escherichia coli MS 200-1]
gi|300398511|gb|EFJ82049.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|300412922|gb|EFJ96232.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300523242|gb|EFK44311.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300531145|gb|EFK52207.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|305853554|gb|EFM53993.1| putative SAM-dependent methyltransferase [Escherichia coli NC101]
gi|306906423|gb|EFN36937.1| rRNA (adenine-N(6)-)-methyltransferase [Escherichia coli W]
gi|307627783|gb|ADN72087.1| putative SAM-dependent methyltransferase [Escherichia coli UM146]
gi|308118367|gb|EFO55629.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|312945324|gb|ADR26151.1| putative SAM-dependent methyltransferase [Escherichia coli O83:H1
str. NRG 857C]
gi|315060043|gb|ADT74370.1| predicted SAM-dependent methyltransferase [Escherichia coli W]
gi|315287232|gb|EFU46644.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|320177297|gb|EFW52301.1| Ribosomal RNA large subunit methyltransferase F [Shigella
dysenteriae CDC 74-1112]
gi|320196697|gb|EFW71320.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
WV_060327]
gi|323155723|gb|EFZ41893.1| hypothetical protein ECEPECA14_2385 [Escherichia coli EPECa14]
gi|323159738|gb|EFZ45716.1| hypothetical protein ECE128010_4044 [Escherichia coli E128010]
gi|323165728|gb|EFZ51514.1| hypothetical protein SS53G_3934 [Shigella sonnei 53G]
gi|323185037|gb|EFZ70403.1| hypothetical protein ECOK1357_1493 [Escherichia coli OK1357]
gi|323379398|gb|ADX51666.1| rRNA (adenine-N(6)-)-methyltransferase [Escherichia coli KO11FL]
gi|323953530|gb|EGB49396.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H252]
gi|323958096|gb|EGB53805.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H263]
gi|324013096|gb|EGB82315.1| hypothetical protein HMPREF9533_02877 [Escherichia coli MS 60-1]
gi|324018512|gb|EGB87731.1| hypothetical protein HMPREF9542_02828 [Escherichia coli MS 117-3]
gi|330910551|gb|EGH39061.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
AA86]
gi|331065532|gb|EGI37425.1| putative methyltransferase YbiN [Escherichia coli TA271]
gi|331079945|gb|EGI51124.1| putative methyltransferase YbiN [Escherichia coli H299]
gi|332088981|gb|EGI94093.1| hypothetical protein SB521682_2565 [Shigella boydii 5216-82]
gi|332091074|gb|EGI96164.1| hypothetical protein SD15574_2498 [Shigella dysenteriae 155-74]
gi|332097403|gb|EGJ02383.1| hypothetical protein SB359474_0821 [Shigella boydii 3594-74]
gi|333968757|gb|AEG35562.1| putative SAM-dependent methyltransferase [Escherichia coli NA114]
gi|342929083|gb|EGU97805.1| putative methyltransferase YbiN [Escherichia coli MS 79-10]
gi|345342417|gb|EGW74811.1| hypothetical protein ECSTECB2F1_0726 [Escherichia coli STEC_B2F1]
gi|345353148|gb|EGW85384.1| hypothetical protein ECSTEC94C_0934 [Escherichia coli STEC_94C]
gi|345358941|gb|EGW91121.1| hypothetical protein EC30301_0943 [Escherichia coli 3030-1]
gi|345384991|gb|EGX14841.1| hypothetical protein ECSTECH18_0923 [Escherichia coli STEC_H.1.8]
gi|355352716|gb|EHG01890.1| putative SAM-dependent methyltransferase [Escherichia coli
cloneA_i1]
gi|371609802|gb|EHN98335.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H397]
gi|375320028|gb|EHS66051.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H43 str.
T22]
gi|378061127|gb|EHW23313.1| 23S rRNA methyltransferase [Escherichia coli DEC8C]
gi|378066755|gb|EHW28883.1| 23S rRNA methyltransferase [Escherichia coli DEC8D]
gi|378079961|gb|EHW41927.1| 23S rRNA methyltransferase [Escherichia coli DEC9A]
gi|378081536|gb|EHW43488.1| 23S rRNA methyltransferase [Escherichia coli DEC9B]
gi|378087642|gb|EHW49498.1| 23S rRNA methyltransferase [Escherichia coli DEC9C]
gi|378093660|gb|EHW55464.1| 23S rRNA methyltransferase [Escherichia coli DEC9D]
gi|378099997|gb|EHW61694.1| 23S rRNA methyltransferase [Escherichia coli DEC9E]
gi|378105104|gb|EHW66751.1| 23S rRNA methyltransferase [Escherichia coli DEC10A]
gi|378114405|gb|EHW75961.1| 23S rRNA methyltransferase [Escherichia coli DEC10B]
gi|378117267|gb|EHW78783.1| 23S rRNA methyltransferase [Escherichia coli DEC10C]
gi|378120838|gb|EHW82300.1| 23S rRNA methyltransferase [Escherichia coli DEC10D]
gi|378132192|gb|EHW93544.1| 23S rRNA methyltransferase [Escherichia coli DEC10E]
gi|378135220|gb|EHW96532.1| 23S rRNA methyltransferase [Escherichia coli DEC11A]
gi|378138260|gb|EHW99518.1| 23S rRNA methyltransferase [Escherichia coli DEC10F]
gi|378145192|gb|EHX06358.1| 23S rRNA methyltransferase [Escherichia coli DEC11B]
gi|378151873|gb|EHX12975.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC11D]
gi|378155054|gb|EHX16114.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC11C]
gi|378160146|gb|EHX21143.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC11E]
gi|378173099|gb|EHX33943.1| 23S rRNA methyltransferase [Escherichia coli DEC12B]
gi|378173810|gb|EHX34643.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC12A]
gi|378175252|gb|EHX36070.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC12C]
gi|378188858|gb|EHX49452.1| 23S rRNA methyltransferase [Escherichia coli DEC13A]
gi|378189544|gb|EHX50136.1| 23S rRNA methyltransferase [Escherichia coli DEC12D]
gi|378193159|gb|EHX53700.1| 23S rRNA methyltransferase [Escherichia coli DEC12E]
gi|378204531|gb|EHX64947.1| 23S rRNA methyltransferase [Escherichia coli DEC13B]
gi|378206712|gb|EHX67114.1| 23S rRNA methyltransferase [Escherichia coli DEC13D]
gi|378207830|gb|EHX68218.1| 23S rRNA methyltransferase [Escherichia coli DEC13C]
gi|378217964|gb|EHX78238.1| 23S rRNA methyltransferase [Escherichia coli DEC13E]
gi|378221551|gb|EHX81799.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC14A]
gi|378224537|gb|EHX84739.1| 23S rRNA methyltransferase [Escherichia coli DEC14B]
gi|378232938|gb|EHX93032.1| 23S rRNA methyltransferase [Escherichia coli DEC14C]
gi|378236551|gb|EHX96597.1| 23S rRNA methyltransferase [Escherichia coli DEC14D]
gi|378242519|gb|EHY02471.1| 23S rRNA methyltransferase [Escherichia coli DEC15A]
gi|378249987|gb|EHY09895.1| 23S rRNA methyltransferase [Escherichia coli DEC15B]
gi|378251032|gb|EHY10933.1| 23S rRNA methyltransferase [Escherichia coli DEC15C]
gi|378257192|gb|EHY17034.1| 23S rRNA methyltransferase [Escherichia coli DEC15D]
gi|378260880|gb|EHY20679.1| 23S rRNA methyltransferase [Escherichia coli DEC15E]
gi|383393957|gb|AFH18915.1| 23S rRNA mA1618 methyltransferase [Escherichia coli KO11FL]
gi|383404260|gb|AFH10503.1| 23S rRNA mA1618 methyltransferase [Escherichia coli W]
gi|383474142|gb|EID66138.1| putative SAM-dependent methyltransferase [Escherichia coli W26]
gi|385707449|gb|EIG44480.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
B799]
gi|386149179|gb|EIG95611.1| rRNA adenine N-6-methyltransferase [Escherichia coli 97.0246]
gi|386159059|gb|EIH15392.1| rRNA adenine N-6-methyltransferase [Escherichia coli 97.0259]
gi|386169527|gb|EIH36035.1| rRNA adenine N-6-methyltransferase [Escherichia coli 96.0497]
gi|386174133|gb|EIH46134.1| rRNA adenine N-6-methyltransferase [Escherichia coli 99.0741]
gi|386176016|gb|EIH53498.1| rRNA adenine N-6-methyltransferase [Escherichia coli 3.2608]
gi|386185550|gb|EIH68276.1| rRNA adenine N-6-methyltransferase [Escherichia coli 93.0624]
gi|386199572|gb|EIH98563.1| rRNA adenine N-6-methyltransferase [Escherichia coli 96.154]
gi|386206644|gb|EII11150.1| rRNA adenine N-6-methyltransferase [Escherichia coli 5.0959]
gi|386211539|gb|EII21995.1| rRNA adenine N-6-methyltransferase [Escherichia coli 9.0111]
gi|386215110|gb|EII31607.1| rRNA adenine N-6-methyltransferase [Escherichia coli 4.0967]
gi|386230003|gb|EII57358.1| rRNA adenine N-6-methyltransferase [Escherichia coli 3.3884]
gi|386247880|gb|EII94053.1| rRNA adenine N-6-methyltransferase [Escherichia coli TW07793]
gi|386261339|gb|EIJ16804.1| rRNA adenine N-6-methyltransferase [Escherichia coli 900105 (10e)]
gi|388332939|gb|EIK99586.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|388338986|gb|EIL05380.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O103:H2 str.
CVM9450]
gi|388347733|gb|EIL13387.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CVM9545]
gi|388366947|gb|EIL30652.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM9942]
gi|388370170|gb|EIL33712.1| SAM-dependent methyltransferase [Escherichia coli O26:H11 str.
CVM10026]
gi|388392911|gb|EIL54312.1| putative SAM-dependent methyltransferase [Escherichia coli KD2]
gi|388405136|gb|EIL65573.1| putative SAM-dependent methyltransferase [Escherichia coli 541-1]
gi|388416377|gb|EIL76268.1| putative SAM-dependent methyltransferase [Escherichia coli HM605]
gi|391256051|gb|EIQ15190.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
CCH060]
gi|391266959|gb|EIQ25900.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
K-315]
gi|391270079|gb|EIQ28976.1| ribosomal RNA large subunit methyltransferase F [Shigella boydii
965-58]
gi|391278363|gb|EIQ37073.1| ribosomal RNA large subunit methyltransferase F [Shigella boydii
4444-74]
gi|391287126|gb|EIQ45657.1| ribosomal RNA large subunit methyltransferase F [Shigella sonnei
3226-85]
gi|391288004|gb|EIQ46513.1| ribosomal RNA large subunit methyltransferase F [Shigella sonnei
3233-85]
gi|391296058|gb|EIQ54174.1| 23S rRNA methyltransferase [Shigella sonnei 4822-66]
gi|391305571|gb|EIQ63351.1| ribosomal RNA large subunit methyltransferase F [Shigella
dysenteriae 225-75]
gi|394381828|gb|EJE59489.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM10224]
gi|394396992|gb|EJE73310.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|394401486|gb|EJE77295.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM10021]
gi|394415982|gb|EJE89803.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM10030]
gi|394419048|gb|EJE92679.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CVM9952]
gi|397786497|gb|EJK97333.1| hypothetical protein ECSTECO31_0754 [Escherichia coli STEC_O31]
gi|397902876|gb|EJL19186.1| 23S rRNA methyltransferase [Shigella sonnei str. Moseley]
gi|408221016|gb|EKI44999.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
07798]
gi|408308832|gb|EKJ26060.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1865]
gi|408347063|gb|EKJ61297.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
0.1288]
gi|421945558|gb|EKU02766.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421945618|gb|EKU02820.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|430879271|gb|ELC02621.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE4]
gi|430889454|gb|ELC12115.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE5]
gi|430900543|gb|ELC22561.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE12]
gi|430909179|gb|ELC30564.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE16]
gi|430910746|gb|ELC32046.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE15]
gi|430917009|gb|ELC38057.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE25]
gi|430931778|gb|ELC52212.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE28]
gi|430946500|gb|ELC66423.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE178]
gi|430996577|gb|ELD12853.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE205]
gi|430999354|gb|ELD15436.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE206]
gi|431009663|gb|ELD24277.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE210]
gi|431031690|gb|ELD44428.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE216]
gi|431044040|gb|ELD54320.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE224]
gi|431062752|gb|ELD72012.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE234]
gi|431086329|gb|ELD92352.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE47]
gi|431093867|gb|ELD99523.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE49]
gi|431111077|gb|ELE14994.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE55]
gi|431119880|gb|ELE22879.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE57]
gi|431123213|gb|ELE25955.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE58]
gi|431132472|gb|ELE34471.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE62]
gi|431150818|gb|ELE51860.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE72]
gi|431156810|gb|ELE57476.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE75]
gi|431182466|gb|ELE82283.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE86]
gi|431193943|gb|ELE93213.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE93]
gi|431217176|gb|ELF14756.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE142]
gi|431236225|gb|ELF31438.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE162]
gi|431246253|gb|ELF40519.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE169]
gi|431251308|gb|ELF45325.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE6]
gi|431258599|gb|ELF51362.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE8]
gi|431267396|gb|ELF58913.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE17]
gi|431274649|gb|ELF65694.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE18]
gi|431285138|gb|ELF75974.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE23]
gi|431294209|gb|ELF84389.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE43]
gi|431299252|gb|ELF88827.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE29]
gi|431304781|gb|ELF93305.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE22]
gi|431312707|gb|ELG00696.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE48]
gi|431329874|gb|ELG17159.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE59]
gi|431341109|gb|ELG28123.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE65]
gi|431350322|gb|ELG37134.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE84]
gi|431356520|gb|ELG43210.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE91]
gi|431370321|gb|ELG56122.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE118]
gi|431374065|gb|ELG59660.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE123]
gi|431379621|gb|ELG64550.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE135]
gi|431386769|gb|ELG70722.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE136]
gi|431401262|gb|ELG84606.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE144]
gi|431407535|gb|ELG90746.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE146]
gi|431424514|gb|ELH06610.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE165]
gi|431435789|gb|ELH17397.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE194]
gi|431446210|gb|ELH26959.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE173]
gi|431448040|gb|ELH28758.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE175]
gi|431452744|gb|ELH33155.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE183]
gi|431454989|gb|ELH35345.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE184]
gi|431486055|gb|ELH65712.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE207]
gi|431493175|gb|ELH72769.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE211]
gi|431496735|gb|ELH76313.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE217]
gi|431505014|gb|ELH83637.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE215]
gi|431517594|gb|ELH95116.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE227]
gi|431518097|gb|ELH95617.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE229]
gi|431553970|gb|ELI27852.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE113]
gi|431592028|gb|ELI62934.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE129]
gi|431600245|gb|ELI69917.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE131]
gi|431605523|gb|ELI74912.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE133]
gi|431618960|gb|ELI87888.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE139]
gi|431621774|gb|ELI90564.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE145]
gi|431630718|gb|ELI99046.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE150]
gi|431633668|gb|ELJ01931.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE148]
gi|431648218|gb|ELJ15617.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE157]
gi|431665485|gb|ELJ32203.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE168]
gi|431677991|gb|ELJ44003.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE176]
gi|431691267|gb|ELJ56727.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE179]
gi|431693129|gb|ELJ58546.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE180]
gi|431708592|gb|ELJ73100.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE88]
gi|431710984|gb|ELJ75346.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE85]
gi|431720201|gb|ELJ84233.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE90]
gi|431724791|gb|ELJ88706.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE94]
gi|449324176|gb|EMD14113.1| 23S rRNA mA1618 methyltransferase [Escherichia coli SEPT362]
Length = 308
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|432390792|ref|ZP_19633650.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE21]
gi|430921410|gb|ELC42234.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE21]
Length = 308
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARVGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|226943290|ref|YP_002798363.1| putative SAM-dependent methyltransferase [Azotobacter vinelandii
DJ]
gi|259491697|sp|C1DPF6.1|RLMF_AZOVD RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|226718217|gb|ACO77388.1| Conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 335
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 162/351 (46%), Gaps = 77/351 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L +P+ FV + G+ ID+ D A + L R LL +G+
Sbjct: 18 LHPRNRHRGRY-DFPALIRRHPALAAFVILNPYGKRSIDFADPEAVKALNRALLAEHYGI 76
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIYP 131
W IP G LCP +P R++Y+H + DLL++ IIP G ++ DIG GANCIYP
Sbjct: 77 RQWDIPPGYLCPPIPGRADYLHGLADLLAAEHGGIIP----RGAALRVLDIGVGANCIYP 132
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G GW F+G+D+ +AL AE V++NP ++ I +R+ ++
Sbjct: 133 LIGHREYGWRFLGADIDPIALASAEAIVRANPGLAAAIRLRRQNDPAH------------ 180
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ G++R E+FD +CNPPF
Sbjct: 181 ---------------------------------------IFQGLLRSDERFDLSLCNPPF 201
Query: 252 FESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALK 294
S EEA L+P+ GG E+ C GGE AF+ R+I +S
Sbjct: 202 HASPEEAVRGSRRKWRNLGKLDPRRKLPLLNFGGQGAELYCPGGEAAFVARMIAESAQFA 261
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++S++ + +NL + L++ G V+ QGQ +AW+F+
Sbjct: 262 GQVCWFSSLISKTANLPAARAALQRAGAREVRVVPMAQGQKQSRFVAWTFL 312
>gi|91209841|ref|YP_539827.1| SAM-dependent methyltransferase [Escherichia coli UTI89]
gi|117622988|ref|YP_851901.1| SAM-dependent methyltransferase [Escherichia coli APEC O1]
gi|237707233|ref|ZP_04537714.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|331646026|ref|ZP_08347129.1| putative methyltransferase YbiN [Escherichia coli M605]
gi|386598526|ref|YP_006100032.1| hypothetical protein ECOK1_0811 [Escherichia coli IHE3034]
gi|91071415|gb|ABE06296.1| hypothetical protein YbiN [Escherichia coli UTI89]
gi|115512112|gb|ABJ00187.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|226898443|gb|EEH84702.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294491385|gb|ADE90141.1| conserved hypothetical protein [Escherichia coli IHE3034]
gi|331044778|gb|EGI16905.1| putative methyltransferase YbiN [Escherichia coli M605]
Length = 338
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 34 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 92
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 93 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 146
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 147 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 191
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 192 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 215
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 216 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 275
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 276 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 325
>gi|424817003|ref|ZP_18242154.1| putative SAM-dependent methyltransferase [Escherichia fergusonii
ECD227]
gi|325498023|gb|EGC95882.1| putative SAM-dependent methyltransferase [Escherichia fergusonii
ECD227]
Length = 335
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 161/350 (46%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRSIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|227112628|ref|ZP_03826284.1| putative SAM-dependent methyltransferase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 311
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 169/349 (48%), Gaps = 69/349 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L YP+ PFV + G +D+ + A + L + LL H + +
Sbjct: 11 LHPRNRHRDRY-DFPALKQSYPALIPFVKVNAYGDESVDFANPEAVKTLNQALLQHFYQI 69
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL+ + R+ + D+G GANCIYPL+G
Sbjct: 70 EHWTIPEGFLCPPIPGRADYIHHLADLLAEDNRSVVPRDASVL---DVGCGANCIYPLIG 126
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW F GS++ A++ A + +++NP ++ I +R+ NS++
Sbjct: 127 HREYGWRFTGSEINPQAMKAANETIEANPGLNRSIRLRRQKNSKA--------------- 171
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+L G++ + FD +CNPPF S
Sbjct: 172 ------------------------------------ILAGIIHKNDTFDAVMCNPPFHAS 195
Query: 255 MEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
E+A GL+ ++ + GG +E+ C GGE AFI ++I++S + W+T
Sbjct: 196 AEDARQGSQRKLHNLGLDKRSPLNFGGQQDELWCEGGESAFIGQMIKESAGFARQCLWFT 255
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
S+V RK NL + L V V+T + QGQ +AWSF+ A +
Sbjct: 256 SLVSRKENLPEIYRVLEAVDAEKVRTIDMAQGQKQSRFVAWSFLDTAAR 304
>gi|296273068|ref|YP_003655699.1| rRNA (adenine-N(6)-)-methyltransferase [Arcobacter nitrofigilis DSM
7299]
gi|296097242|gb|ADG93192.1| rRNA (adenine-N(6)-)-methyltransferase [Arcobacter nitrofigilis DSM
7299]
Length = 316
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 165/353 (46%), Gaps = 69/353 (19%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
+E + +HP+N +++ DF L P +VF ++ ID+ D A L + L
Sbjct: 3 HKEHKKGLHPRNPHNKRY-DFPQLIKSLPKLADYVFKNKYDEVSIDFADAKAVMALNKAL 61
Query: 69 LLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
L H + + W IP+G LCP +P R++Y+H+I D+L+ + G ++KG DIG GAN
Sbjct: 62 LAHFYNIKKWSIPEGYLCPPIPGRADYLHYIADILAEFNGAKVPK-GSEIKGLDIGIGAN 120
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYP++G S+ GWSFVGSD+ ++E ++K ++SN + +E R N +S
Sbjct: 121 CIYPIIGNSVYGWSFVGSDIEKESIESSQKIIESNDSLRGNVECRLQTNHDS-------- 172
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ G++++ ++FDF +C
Sbjct: 173 -------------------------------------------IFTGIIKEDDRFDFTLC 189
Query: 248 NPPFFESMEEAGLNPKTSC---------------GGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF +S EEA K GG E+ C GGE AF+ +I+ S
Sbjct: 190 NPPFHKSQEEAQAGSKRKVQNLTKQVVNKASLNFGGKSNELWCKGGEVAFVKAMIKQSKK 249
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W++++V +K NL+F+ + V T T E GQ + W+F+
Sbjct: 250 YAKNCFWFSTIVSKKDNLQFIYDTIDYVKPTEYDTIEMQHGQKISRIVIWTFL 302
>gi|260866974|ref|YP_003233376.1| putative SAM-dependent methyltransferase [Escherichia coli O111:H-
str. 11128]
gi|415824791|ref|ZP_11513025.1| hypothetical protein ECOK1180_5859 [Escherichia coli OK1180]
gi|417192677|ref|ZP_12014524.1| rRNA adenine N-6-methyltransferase [Escherichia coli 4.0522]
gi|417209561|ref|ZP_12020845.1| rRNA adenine N-6-methyltransferase [Escherichia coli JB1-95]
gi|417590526|ref|ZP_12241241.1| hypothetical protein EC253486_1124 [Escherichia coli 2534-86]
gi|419195921|ref|ZP_13739325.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC8A]
gi|419202062|ref|ZP_13745284.1| 23S rRNA methyltransferase [Escherichia coli DEC8B]
gi|419220102|ref|ZP_13763054.1| 23S rRNA methyltransferase [Escherichia coli DEC8E]
gi|419887289|ref|ZP_14407885.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CVM9570]
gi|419894559|ref|ZP_14414455.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CVM9574]
gi|420088806|ref|ZP_14600666.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CVM9602]
gi|420094210|ref|ZP_14605812.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CVM9634]
gi|424769461|ref|ZP_18196688.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257763330|dbj|BAI34825.1| predicted SAM-dependent methyltransferase [Escherichia coli O111:H-
str. 11128]
gi|323175574|gb|EFZ61169.1| hypothetical protein ECOK1180_5859 [Escherichia coli OK1180]
gi|345344472|gb|EGW76839.1| hypothetical protein EC253486_1124 [Escherichia coli 2534-86]
gi|378051729|gb|EHW14044.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC8A]
gi|378055706|gb|EHW17967.1| 23S rRNA methyltransferase [Escherichia coli DEC8B]
gi|378071336|gb|EHW33406.1| 23S rRNA methyltransferase [Escherichia coli DEC8E]
gi|386189858|gb|EIH78606.1| rRNA adenine N-6-methyltransferase [Escherichia coli 4.0522]
gi|386196186|gb|EIH90412.1| rRNA adenine N-6-methyltransferase [Escherichia coli JB1-95]
gi|388363154|gb|EIL27094.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CVM9570]
gi|388363396|gb|EIL27325.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CVM9574]
gi|394389596|gb|EJE66738.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CVM9602]
gi|394396895|gb|EJE73226.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CVM9634]
gi|421944110|gb|EKU01372.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 308
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 161/350 (46%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNP--KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDELNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|218699181|ref|YP_002406810.1| putative SAM-dependent methyltransferase [Escherichia coli IAI39]
gi|386623208|ref|YP_006142936.1| putative SAM-dependent methyltransferase [Escherichia coli O7:K1
str. CE10]
gi|254807082|sp|B7NNN9.1|RLMF_ECO7I RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|218369167|emb|CAR16922.1| putative AdoMet-dependent methyltransferase [Escherichia coli
IAI39]
gi|349736946|gb|AEQ11652.1| putative SAM-dependent methyltransferase [Escherichia coli O7:K1
str. CE10]
Length = 308
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 161/350 (46%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLTH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH++ DLL+ + IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHYLADLLAEATGSIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|415836777|ref|ZP_11519075.1| hypothetical protein ECRN5871_0783 [Escherichia coli RN587/1]
gi|417282841|ref|ZP_12070139.1| rRNA adenine N-6-methyltransferase [Escherichia coli 3003]
gi|425276667|ref|ZP_18667994.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
ARS4.2123]
gi|323190935|gb|EFZ76202.1| hypothetical protein ECRN5871_0783 [Escherichia coli RN587/1]
gi|386244046|gb|EII85778.1| rRNA adenine N-6-methyltransferase [Escherichia coli 3003]
gi|408206290|gb|EKI31100.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
ARS4.2123]
Length = 308
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVLWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|422763941|ref|ZP_16817694.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
E1167]
gi|324116231|gb|EGC10153.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
E1167]
Length = 308
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLSRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|427803899|ref|ZP_18970966.1| hypothetical protein BN16_13081 [Escherichia coli chi7122]
gi|427808484|ref|ZP_18975549.1| hypothetical protein BN17_06061 [Escherichia coli]
gi|412962081|emb|CCK45995.1| hypothetical protein BN16_13081 [Escherichia coli chi7122]
gi|412968663|emb|CCJ43288.1| hypothetical protein BN17_06061 [Escherichia coli]
Length = 335
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + SNP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|367046408|ref|XP_003653584.1| hypothetical protein THITE_2116145 [Thielavia terrestris NRRL 8126]
gi|347000846|gb|AEO67248.1| hypothetical protein THITE_2116145 [Thielavia terrestris NRRL 8126]
Length = 493
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 174/356 (48%), Gaps = 74/356 (20%)
Query: 10 REERPTIHP----KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
R P +H + YS P DF LA P F +G+ +D++D AT +LT
Sbjct: 50 RRPAPGVHADGYFRRLYSAEP-DFKQLAKQDPRFA--AVLQDNGQ--LDFSDPAATMQLT 104
Query: 66 RVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG 125
+ LL D GL +P +LCP VPNR NYI W++DL+ + + G K+ G D+GTG
Sbjct: 105 KTLLQIDFGLKLELPHDRLCPPVPNRHNYILWLKDLMDTT---SYEPPGRKLCGLDVGTG 161
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
A+CIYPLLG W F+ +D+ L++A++N++ N IR ++ P +
Sbjct: 162 ASCIYPLLGTVQRPWCFLATDIDAQNLDYAKRNIQLNGLED---RIRLLERKPEDPLVP- 217
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+DE +G QS DF
Sbjct: 218 ------------------LDE-------------SGVQS-----------------IDFV 229
Query: 246 ICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+ NPPF+ S +E P ++C G P EMVC GGE + R++ +S+ L+ +
Sbjct: 230 MMNPPFYTSEDEMLSSARKKSRPPMSACTGAPVEMVCEGGEVGHVGRLLRESLVLRDRIQ 289
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PARKI 351
WYTSM+G+ ++L+ L+ +LR+ G+ TEFVQG +T RW L WSF P PA ++
Sbjct: 290 WYTSMLGKLTSLEVLVEQLRENGIDNYAVTEFVQGNKTRRWALGWSFGPMRPAERV 345
>gi|452825608|gb|EME32604.1| ribosomal RNA large subunit methyltransferase F [Galdieria
sulphuraria]
Length = 276
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 69/321 (21%)
Query: 27 PDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCP 86
PDF LA L + Y R GR +D+ + LT+ + H+ GL W IP G LCP
Sbjct: 13 PDFGKLAHLD---DELAKYYRKGR--LDFRKESVCISLTKAIFQHEFGLRWSIPPGHLCP 67
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGD---KVKGFDIGTGANCIYPLLGASLLGWSFV 143
+P+R Y+ WIE LL GD ++G DIGTGA+C+YPLLGA LLG+ F
Sbjct: 68 AIPSRLEYLCWIETLLKFE--------GDLQLPIRGLDIGTGASCVYPLLGAKLLGFYFT 119
Query: 144 GSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGH 203
+++ + + A KN++ N ++ +EIRK E
Sbjct: 120 ATEVDQESYQSALKNIQDN-NLDSQVEIRKASQGE------------------------- 153
Query: 204 MDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPK 263
+L GV+R + F F +CNPPFF M E+ +P
Sbjct: 154 ---------------------------ILHGVMRGTDTFHFVMCNPPFFADMSESSSHPF 186
Query: 264 TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323
G +MV SGGE +FI+++ +SV Q RW+TS+VGRK +L L +++ T
Sbjct: 187 RVKTGDGRQMVTSGGEVSFISQMARESVEWSQNIRWFTSLVGRKKDLGILQRYIQQNITT 246
Query: 324 IVKTTEFVQGQTCRWGLAWSF 344
V+ T QG+T RW +AWSF
Sbjct: 247 EVRRTCLKQGRTSRWIIAWSF 267
>gi|218549626|ref|YP_002383417.1| SAM-dependent methyltransferase [Escherichia fergusonii ATCC 35469]
gi|422804770|ref|ZP_16853202.1| ribosomal RNA large subunit methyltransferase F [Escherichia
fergusonii B253]
gi|254807086|sp|B7LJV2.1|RLMF_ESCF3 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|218357167|emb|CAQ89802.1| putative AdoMet-dependent methyltransferase [Escherichia fergusonii
ATCC 35469]
gi|324114373|gb|EGC08342.1| ribosomal RNA large subunit methyltransferase F [Escherichia
fergusonii B253]
Length = 308
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPA------RASILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|312970883|ref|ZP_07785062.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|310336644|gb|EFQ01811.1| conserved hypothetical protein [Escherichia coli 1827-70]
Length = 308
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL +S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLVEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + SNP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|162135897|ref|NP_415328.4| 23S rRNA mA1618 methyltransferase, SAM-dependent [Escherichia coli
str. K-12 substr. MG1655]
gi|170020837|ref|YP_001725791.1| putative SAM-dependent methyltransferase [Escherichia coli ATCC
8739]
gi|170080466|ref|YP_001729786.1| putative SAM-dependent methyltransferase [Escherichia coli str.
K-12 substr. DH10B]
gi|238900066|ref|YP_002925862.1| putative SAM-dependent methyltransferase [Escherichia coli BW2952]
gi|300922832|ref|ZP_07138918.1| hypothetical protein HMPREF9548_01064 [Escherichia coli MS 182-1]
gi|300947110|ref|ZP_07161326.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300957005|ref|ZP_07169254.1| hypothetical protein HMPREF9547_02797 [Escherichia coli MS 175-1]
gi|301027255|ref|ZP_07190614.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301328001|ref|ZP_07221164.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301646238|ref|ZP_07246133.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|386279816|ref|ZP_10057492.1| ribosomal RNA large subunit methyltransferase F [Escherichia sp.
4_1_40B]
gi|386596357|ref|YP_006092757.1| hypothetical protein [Escherichia coli DH1]
gi|386612970|ref|YP_006132636.1| hypothetical protein UMNK88_848 [Escherichia coli UMNK88]
gi|387611349|ref|YP_006114465.1| hypothetical protein ETEC_0874 [Escherichia coli ETEC H10407]
gi|387620534|ref|YP_006128161.1| putative SAM-dependent methyltransferase [Escherichia coli DH1]
gi|388476892|ref|YP_489080.1| SAM-dependent methyltransferase [Escherichia coli str. K-12 substr.
W3110]
gi|404374130|ref|ZP_10979350.1| ribosomal RNA large subunit methyltransferase F [Escherichia sp.
1_1_43]
gi|415771453|ref|ZP_11485312.1| conserved hypothetical protein [Escherichia coli 3431]
gi|416345048|ref|ZP_11678691.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4100B]
gi|417262009|ref|ZP_12049497.1| rRNA adenine N-6-methyltransferase [Escherichia coli 2.3916]
gi|417274896|ref|ZP_12062236.1| rRNA adenine N-6-methyltransferase [Escherichia coli 2.4168]
gi|417275376|ref|ZP_12062713.1| rRNA adenine N-6-methyltransferase [Escherichia coli 3.2303]
gi|417289647|ref|ZP_12076930.1| rRNA adenine N-6-methyltransferase [Escherichia coli B41]
gi|417606912|ref|ZP_12257436.1| hypothetical protein ECSTECDG1313_1311 [Escherichia coli
STEC_DG131-3]
gi|417611900|ref|ZP_12262372.1| hypothetical protein ECSTECEH250_0952 [Escherichia coli STEC_EH250]
gi|417617244|ref|ZP_12267674.1| hypothetical protein ECG581_1049 [Escherichia coli G58-1]
gi|417633427|ref|ZP_12283646.1| hypothetical protein ECSTECS1191_1335 [Escherichia coli STEC_S1191]
gi|417638130|ref|ZP_12288297.1| hypothetical protein ECTX1999_0843 [Escherichia coli TX1999]
gi|417945095|ref|ZP_12588332.1| 23S rRNA mA1618 methyltransferase [Escherichia coli XH140A]
gi|417975131|ref|ZP_12615931.1| 23S rRNA mA1618 methyltransferase [Escherichia coli XH001]
gi|418301710|ref|ZP_12913504.1| hypothetical protein UMNF18_863 [Escherichia coli UMNF18]
gi|418958860|ref|ZP_13510769.1| putative methyltransferase YbiN [Escherichia coli J53]
gi|419141325|ref|ZP_13686079.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC6A]
gi|419146934|ref|ZP_13691625.1| 23S rRNA methyltransferase [Escherichia coli DEC6B]
gi|419152716|ref|ZP_13697300.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC6C]
gi|419158138|ref|ZP_13702655.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC6D]
gi|419163072|ref|ZP_13707548.1| 23S rRNA methyltransferase [Escherichia coli DEC6E]
gi|419168793|ref|ZP_13713187.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC7A]
gi|419174313|ref|ZP_13718166.1| 23S rRNA methyltransferase [Escherichia coli DEC7B]
gi|419179774|ref|ZP_13723397.1| 23S rRNA methyltransferase [Escherichia coli DEC7C]
gi|419185334|ref|ZP_13728856.1| 23S rRNA methyltransferase [Escherichia coli DEC7D]
gi|419190529|ref|ZP_13733996.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC7E]
gi|419809578|ref|ZP_14334463.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O32:H37 str.
P4]
gi|419941026|ref|ZP_14457737.1| putative SAM-dependent methyltransferase [Escherichia coli 75]
gi|420384432|ref|ZP_14883817.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EPECa12]
gi|421776888|ref|ZP_16213489.1| putative methyltransferase YbiN [Escherichia coli AD30]
gi|422765331|ref|ZP_16819058.1| ribosomal RNA large methyltransferase F [Escherichia coli E1520]
gi|422769997|ref|ZP_16823688.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
E482]
gi|422819834|ref|ZP_16868044.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
M919]
gi|422959066|ref|ZP_16970997.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H494]
gi|423701611|ref|ZP_17676070.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H730]
gi|425114165|ref|ZP_18515986.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.0566]
gi|425118874|ref|ZP_18520596.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.0569]
gi|425271556|ref|ZP_18663051.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW15901]
gi|425282210|ref|ZP_18673315.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW00353]
gi|425287385|ref|ZP_18678309.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
3006]
gi|432368820|ref|ZP_19611921.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE10]
gi|432415793|ref|ZP_19658417.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE44]
gi|432484500|ref|ZP_19726420.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE212]
gi|432530134|ref|ZP_19767174.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE233]
gi|432562739|ref|ZP_19799360.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE51]
gi|432579459|ref|ZP_19815890.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE56]
gi|432626413|ref|ZP_19862394.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE77]
gi|432636080|ref|ZP_19871962.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE81]
gi|432660034|ref|ZP_19895684.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE111]
gi|432669710|ref|ZP_19905251.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE119]
gi|432684611|ref|ZP_19919923.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE156]
gi|432690699|ref|ZP_19925938.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE161]
gi|432703373|ref|ZP_19938492.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE171]
gi|432736307|ref|ZP_19971078.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE42]
gi|432812908|ref|ZP_20046753.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE101]
gi|432880542|ref|ZP_20097077.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE154]
gi|432954107|ref|ZP_20146226.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE197]
gi|433046944|ref|ZP_20234354.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE120]
gi|433129157|ref|ZP_20314626.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE163]
gi|433133972|ref|ZP_20319346.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE166]
gi|433172636|ref|ZP_20357189.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE232]
gi|442592747|ref|ZP_21010713.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|443616860|ref|YP_007380716.1| 23S rRNA mA1618 methyltransferase [Escherichia coli APEC O78]
gi|450212267|ref|ZP_21894534.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O08]
gi|450240642|ref|ZP_21899387.1| 23S rRNA mA1618 methyltransferase [Escherichia coli S17]
gi|3915947|sp|P75782.2|RLMF_ECOLI RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829550|sp|B1X7D7.1|RLMF_ECODH RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829553|sp|B1IXG1.1|RLMF_ECOLC RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829591|sp|A7ZY64.2|RLMF_ECOHS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|259491698|sp|C4ZXX9.1|RLMF_ECOBW RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|85674767|dbj|BAA35473.2| predicted SAM-dependent methyltransferase [Escherichia coli str.
K12 substr. W3110]
gi|87081786|gb|AAC73894.2| 23S rRNA m(6)A1618 methyltransferase, SAM-dependent [Escherichia
coli str. K-12 substr. MG1655]
gi|169755765|gb|ACA78464.1| protein of unknown function DUF890 [Escherichia coli ATCC 8739]
gi|169888301|gb|ACB02008.1| predicted SAM-dependent methyltransferase [Escherichia coli str.
K-12 substr. DH10B]
gi|238863094|gb|ACR65092.1| predicted SAM-dependent methyltransferase [Escherichia coli BW2952]
gi|260450046|gb|ACX40468.1| protein of unknown function DUF890 [Escherichia coli DH1]
gi|299879360|gb|EFI87571.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300316224|gb|EFJ66008.1| hypothetical protein HMPREF9547_02797 [Escherichia coli MS 175-1]
gi|300420864|gb|EFK04175.1| hypothetical protein HMPREF9548_01064 [Escherichia coli MS 182-1]
gi|300453259|gb|EFK16879.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300845493|gb|EFK73253.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301075535|gb|EFK90341.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|309701085|emb|CBJ00383.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
gi|315135457|dbj|BAJ42616.1| putative SAM-dependent methyltransferase [Escherichia coli DH1]
gi|315619811|gb|EFV00330.1| conserved hypothetical protein [Escherichia coli 3431]
gi|320198996|gb|EFW73593.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4100B]
gi|323938162|gb|EGB34422.1| ribosomal RNA large methyltransferase F [Escherichia coli E1520]
gi|323942680|gb|EGB38845.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
E482]
gi|332342139|gb|AEE55473.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|339413808|gb|AEJ55480.1| hypothetical protein UMNF18_863 [Escherichia coli UMNF18]
gi|342363269|gb|EGU27379.1| 23S rRNA mA1618 methyltransferase [Escherichia coli XH140A]
gi|344195122|gb|EGV49192.1| 23S rRNA mA1618 methyltransferase [Escherichia coli XH001]
gi|345364317|gb|EGW96443.1| hypothetical protein ECSTECDG1313_1311 [Escherichia coli
STEC_DG131-3]
gi|345365249|gb|EGW97358.1| hypothetical protein ECSTECEH250_0952 [Escherichia coli STEC_EH250]
gi|345380416|gb|EGX12315.1| hypothetical protein ECG581_1049 [Escherichia coli G58-1]
gi|345390141|gb|EGX19940.1| hypothetical protein ECSTECS1191_1335 [Escherichia coli STEC_S1191]
gi|345395117|gb|EGX24869.1| hypothetical protein ECTX1999_0843 [Escherichia coli TX1999]
gi|359331499|dbj|BAL37946.1| predicted SAM-dependent methyltransferase [Escherichia coli str.
K-12 substr. MDS42]
gi|371595340|gb|EHN84190.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H494]
gi|377998940|gb|EHV62027.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC6A]
gi|378000453|gb|EHV63524.1| 23S rRNA methyltransferase [Escherichia coli DEC6B]
gi|378002951|gb|EHV66000.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC6C]
gi|378012227|gb|EHV75159.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC6D]
gi|378015774|gb|EHV78665.1| 23S rRNA methyltransferase [Escherichia coli DEC6E]
gi|378018011|gb|EHV80878.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC7A]
gi|378026959|gb|EHV89591.1| 23S rRNA methyltransferase [Escherichia coli DEC7C]
gi|378032752|gb|EHV95333.1| 23S rRNA methyltransferase [Escherichia coli DEC7D]
gi|378037170|gb|EHV99705.1| 23S rRNA methyltransferase [Escherichia coli DEC7B]
gi|378041766|gb|EHW04224.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC7E]
gi|384378329|gb|EIE36211.1| putative methyltransferase YbiN [Escherichia coli J53]
gi|385157759|gb|EIF19750.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O32:H37 str.
P4]
gi|385536449|gb|EIF83342.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
M919]
gi|385711907|gb|EIG48863.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
H730]
gi|386123063|gb|EIG71664.1| ribosomal RNA large subunit methyltransferase F [Escherichia sp.
4_1_40B]
gi|386225136|gb|EII47471.1| rRNA adenine N-6-methyltransferase [Escherichia coli 2.3916]
gi|386233324|gb|EII65309.1| rRNA adenine N-6-methyltransferase [Escherichia coli 2.4168]
gi|386242029|gb|EII78942.1| rRNA adenine N-6-methyltransferase [Escherichia coli 3.2303]
gi|386255685|gb|EIJ05373.1| rRNA adenine N-6-methyltransferase [Escherichia coli B41]
gi|388401744|gb|EIL62366.1| putative SAM-dependent methyltransferase [Escherichia coli 75]
gi|391309016|gb|EIQ66699.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EPECa12]
gi|404292344|gb|EJZ49170.1| ribosomal RNA large subunit methyltransferase F [Escherichia sp.
1_1_43]
gi|408197015|gb|EKI22286.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW15901]
gi|408205339|gb|EKI30227.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW00353]
gi|408218149|gb|EKI42382.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
3006]
gi|408458002|gb|EKJ81792.1| putative methyltransferase YbiN [Escherichia coli AD30]
gi|408571877|gb|EKK47804.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.0566]
gi|408572889|gb|EKK48770.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.0569]
gi|430888032|gb|ELC10755.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE10]
gi|430942338|gb|ELC62471.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE44]
gi|431017651|gb|ELD31106.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE212]
gi|431056508|gb|ELD66009.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE233]
gi|431097957|gb|ELE03282.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE51]
gi|431107449|gb|ELE11614.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE56]
gi|431164361|gb|ELE64752.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE77]
gi|431172974|gb|ELE73055.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE81]
gi|431201906|gb|ELF00602.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE111]
gi|431212880|gb|ELF10801.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE119]
gi|431224118|gb|ELF21347.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE156]
gi|431229085|gb|ELF25737.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE161]
gi|431245938|gb|ELF40216.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE171]
gi|431285847|gb|ELF76682.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE42]
gi|431356114|gb|ELG42805.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE101]
gi|431412770|gb|ELG95569.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE154]
gi|431469405|gb|ELH49334.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE197]
gi|431571052|gb|ELI43959.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE120]
gi|431650879|gb|ELJ18187.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE163]
gi|431662049|gb|ELJ28859.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE166]
gi|431695627|gb|ELJ60929.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE232]
gi|441607553|emb|CCP96154.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|443421368|gb|AGC86272.1| 23S rRNA mA1618 methyltransferase [Escherichia coli APEC O78]
gi|449322029|gb|EMD12033.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O08]
gi|449324320|gb|EMD14255.1| 23S rRNA mA1618 methyltransferase [Escherichia coli S17]
Length = 308
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + SNP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|432440128|ref|ZP_19682481.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE189]
gi|432445299|ref|ZP_19687605.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE191]
gi|433012981|ref|ZP_20201357.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE104]
gi|433022667|ref|ZP_20210679.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE106]
gi|433322365|ref|ZP_20399835.1| 23S rRNA mA1618 methyltransferase [Escherichia coli J96]
gi|430969041|gb|ELC86203.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE189]
gi|430975141|gb|ELC92043.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE191]
gi|431534629|gb|ELI11109.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE104]
gi|431539404|gb|ELI15155.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE106]
gi|432349083|gb|ELL43524.1| 23S rRNA mA1618 methyltransferase [Escherichia coli J96]
Length = 308
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAAWAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|227884230|ref|ZP_04002035.1| SAM-dependent methyltransferase [Escherichia coli 83972]
gi|386638160|ref|YP_006104958.1| putative SAM-dependent methyltransferase [Escherichia coli ABU
83972]
gi|422364714|ref|ZP_16445225.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|432410809|ref|ZP_19653490.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE39]
gi|432430857|ref|ZP_19673300.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE187]
gi|432435385|ref|ZP_19677784.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE188]
gi|432455672|ref|ZP_19697871.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE201]
gi|432494610|ref|ZP_19736426.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE214]
gi|432503449|ref|ZP_19745184.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE220]
gi|432522894|ref|ZP_19760031.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE230]
gi|432567640|ref|ZP_19804165.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE53]
gi|432591860|ref|ZP_19828187.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE60]
gi|432606627|ref|ZP_19842820.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE67]
gi|432650269|ref|ZP_19886029.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE87]
gi|432782648|ref|ZP_20016832.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE63]
gi|432843112|ref|ZP_20076447.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE141]
gi|432977466|ref|ZP_20166289.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE209]
gi|432994537|ref|ZP_20183151.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE218]
gi|432998956|ref|ZP_20187494.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE223]
gi|433057100|ref|ZP_20244183.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE124]
gi|433086417|ref|ZP_20272812.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE137]
gi|433114692|ref|ZP_20300506.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE153]
gi|433124351|ref|ZP_20309938.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE160]
gi|433138411|ref|ZP_20323695.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE167]
gi|433148198|ref|ZP_20333262.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE174]
gi|433206926|ref|ZP_20390621.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE97]
gi|433211674|ref|ZP_20395287.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE99]
gi|442606359|ref|ZP_21021159.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
Nissle 1917]
gi|205829588|sp|Q8FJM4.2|RLMF_ECOL6 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|227838982|gb|EEJ49448.1| SAM-dependent methyltransferase [Escherichia coli 83972]
gi|307552652|gb|ADN45427.1| putative SAM-dependent methyltransferase [Escherichia coli ABU
83972]
gi|315292584|gb|EFU51936.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|430937307|gb|ELC57562.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE39]
gi|430955297|gb|ELC74080.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE187]
gi|430965713|gb|ELC83122.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE188]
gi|430984399|gb|ELD01022.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE201]
gi|431027215|gb|ELD40278.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE214]
gi|431041495|gb|ELD51995.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE220]
gi|431054204|gb|ELD63785.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE230]
gi|431102588|gb|ELE07402.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE53]
gi|431131776|gb|ELE33792.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE60]
gi|431140079|gb|ELE41856.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE67]
gi|431192825|gb|ELE92169.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE87]
gi|431331047|gb|ELG18310.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE63]
gi|431396883|gb|ELG80345.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE141]
gi|431480977|gb|ELH60691.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE209]
gi|431508750|gb|ELH87021.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE218]
gi|431513296|gb|ELH91379.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE223]
gi|431573668|gb|ELI46465.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE124]
gi|431609074|gb|ELI78407.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE137]
gi|431636402|gb|ELJ04533.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE153]
gi|431649158|gb|ELJ16517.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE160]
gi|431664589|gb|ELJ31323.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE167]
gi|431676311|gb|ELJ42431.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE174]
gi|431732142|gb|ELJ95598.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE97]
gi|431735872|gb|ELJ99216.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE99]
gi|441712435|emb|CCQ07136.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
Nissle 1917]
Length = 308
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHNSATAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|26246782|ref|NP_752822.1| SAM-dependent methyltransferase [Escherichia coli CFT073]
gi|386628347|ref|YP_006148067.1| putative SAM-dependent methyltransferase [Escherichia coli str.
'clone D i2']
gi|386633267|ref|YP_006152986.1| putative SAM-dependent methyltransferase [Escherichia coli str.
'clone D i14']
gi|26107181|gb|AAN79365.1|AE016757_269 Hypothetical protein ybiN [Escherichia coli CFT073]
gi|355419246|gb|AER83443.1| putative SAM-dependent methyltransferase [Escherichia coli str.
'clone D i2']
gi|355424166|gb|AER88362.1| putative SAM-dependent methyltransferase [Escherichia coli str.
'clone D i14']
Length = 338
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 34 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 92
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 93 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 146
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 147 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 191
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 192 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 215
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 216 PPFHNSATAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 275
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 276 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 325
>gi|104783416|ref|YP_609914.1| putative SAM-dependent methyltransferase [Pseudomonas entomophila
L48]
gi|122401994|sp|Q1I5F5.1|RLMF_PSEE4 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|95112403|emb|CAK17130.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 316
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 164/351 (46%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 3 DKPTLHPRNRH-QGRYDFPALIKAHPDLARFTITNPYGKPSIDFANPEAVRVFNRALLKA 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP +P R++YIH + DLL+ + R G +V+ DIG GANCIY
Sbjct: 62 QYGVQHWDIPADYLCPPIPGRADYIHVLADLLAEDNAGDVPR-GAQVRALDIGVGANCIY 120
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG S W F+GSD+ AL A+ V++N
Sbjct: 121 PLLGHSDYRWRFLGSDIDTTALASAKAIVQAN---------------------------- 152
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+D + + ++ +P +L G+++ E+FD +CNPP
Sbjct: 153 ------KLDKAIGLRQQTQPKH------------------ILAGLLQADERFDVTLCNPP 188
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F S EEA P + GG E+ C GGE F+++++ +SV
Sbjct: 189 FHASREEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVSQLVGESVQY 248
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V + SNL + + L+K GV ++ E QGQ +AWSF
Sbjct: 249 AEQVLWFTSLVSKASNLPGIEAALKKAGVKALRIVEMGQGQKQSRMVAWSF 299
>gi|152998680|ref|YP_001364361.1| putative SAM-dependent methyltransferase [Shewanella baltica OS185]
gi|205829618|sp|A6WHK9.1|RLMF_SHEB8 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|151363298|gb|ABS06298.1| protein of unknown function DUF890 [Shewanella baltica OS185]
Length = 365
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 165/366 (45%), Gaps = 75/366 (20%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K + R E + +HP+N + N DF L S +P + FV + G +D+ D A + L
Sbjct: 45 KDKPRVEIKKALHPRNAHL-NGYDFPALISAFPQLKTFVRPTPYGALSVDFADPLAVKTL 103
Query: 65 TRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LL H +G+ W IP+G LCP +P R +Y+H++ DLL+ S DK + DIG
Sbjct: 104 NAALLKHHYGIGSWNIPEGALCPPIPGRVDYVHYVADLLAEG---DKSCAMDKARVLDIG 160
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP+LG + GW +V SD+ N+ S ++
Sbjct: 161 TGANGIYPILGCQVYGWQYVASDI----------------------------NAHSLTNV 192
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
Q + E N + G + +P + F GV++ E+F+
Sbjct: 193 QSII-------EQNPVLQGRISLRLQPDDKAVFK----------------GVIQAEERFE 229
Query: 244 FCICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFIT 284
+CNPPF SM EA LN PK + GG E+ C GGER F+
Sbjct: 230 LTLCNPPFHASMAEASEGTKRKVNNLQLNRGSSVKAAPKLNFGGQAAELWCQGGERQFLA 289
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I +S W+TS+V ++ NLK L ++ V VKT E QG LAWSF
Sbjct: 290 TMIRESQMFADQCLWFTSLVSKQENLKPCYQALAQLNVDTVKTIEMQQGNKITRVLAWSF 349
Query: 345 VPPARK 350
A++
Sbjct: 350 QSAAKR 355
>gi|157160283|ref|YP_001457601.1| SAM-dependent methyltransferase [Escherichia coli HS]
gi|331641323|ref|ZP_08342458.1| putative methyltransferase YbiN [Escherichia coli H736]
gi|157065963|gb|ABV05218.1| conserved hypothetical protein [Escherichia coli HS]
gi|331038121|gb|EGI10341.1| putative methyltransferase YbiN [Escherichia coli H736]
Length = 335
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + SNP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|300778810|ref|ZP_07088668.1| rRNA (adenine-N(6)-)-methyltransferase [Chryseobacterium gleum ATCC
35910]
gi|300504320|gb|EFK35460.1| rRNA (adenine-N(6)-)-methyltransferase [Chryseobacterium gleum ATCC
35910]
Length = 309
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 168/353 (47%), Gaps = 74/353 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++H +N + NP DF L S P + +VF + I+++ A + L + LLLH
Sbjct: 4 EKSSLHTRNLH-RNPYDFDQLISCVPELKHYVFTNAYQTVTINFSIPKAVKLLNKALLLH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI--IPTTSRNGDKVKGFDIGTGANC 128
+ + W IPD LCP +P R++Y+H+I DLL+ + IPT G+ VKG DIGTGAN
Sbjct: 63 FYHIKGWDIPDTNLCPPIPGRADYVHYIADLLAEQLDEIPT----GNSVKGLDIGTGANL 118
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YPL+ GW+ +G+D+ +L+ A+ + NP +S +I+++
Sbjct: 119 VYPLISHRSYGWTMMGTDINQDSLKNAQHILDQNPDLSSVIQLK---------------- 162
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
++P + F V +++ ++ F +CN
Sbjct: 163 -------------------SQPDADHIF----------------VNMIKPEDRLTFTMCN 187
Query: 249 PPFFESMEEA---------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF +S E A P + G E+ C GGE AFIT++I +S
Sbjct: 188 PPFHDSEESAMKGNIRKMKNLHQSKKSKPLLNFSGQQSELWCEGGELAFITKMIHESALF 247
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
W+T +V +K NL L + L+KV VKT + QGQ LAW+F+P
Sbjct: 248 STQVLWFTCLVSKKDNLNKLTNLLKKVKAAEVKTIDMAQGQKISRILAWTFIP 300
>gi|333892139|ref|YP_004466014.1| 23S rRNA mA1618 methyltransferase [Alteromonas sp. SN2]
gi|332992157|gb|AEF02212.1| 23S rRNA mA1618 methyltransferase [Alteromonas sp. SN2]
Length = 335
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 168/377 (44%), Gaps = 102/377 (27%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N + P A L +P+ +V ++ G+ ID+ + +A + L LL+H +G
Sbjct: 14 SMHTRNLHRNGYP-MAALCQAHPALSGYVINAKSGKKSIDFANQDAVKALNAALLIHYYG 72
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIY 130
L W IP+G LCP VP R++YIH I D+L+ +IP GD+VKG D+G GAN IY
Sbjct: 73 LKTWDIPNGYLCPPVPGRADYIHGIADVLARSNGGVIP----KGDEVKGLDVGIGANAIY 128
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P++G+ GW FVGSD+ V+++ A+ NP +S L+ +RK
Sbjct: 129 PIIGSQSYGWQFVGSDIDAVSVKSAKSIANKNPKLSPLLSVRK----------------- 171
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+P+ + F G+++ E F F +CNPP
Sbjct: 172 ------------------QPNKAKIFE----------------GIIQPNEHFTFTMCNPP 197
Query: 251 FFESMEEAGL-----------------------------NPKTSC-------------GG 268
F +S E A L N TS G
Sbjct: 198 FHKSAEAAALGSERKAIGLKGNKQKRSGKKPRVDIQANTNAHTSAKAKPDISSVKLNFAG 257
Query: 269 TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328
T E+ C GGE AFI R+I +SVA K W+T +V + +LK + + + G T
Sbjct: 258 TGNELWCEGGELAFIQRMIIESVAFKTQVDWFTCLVSKSDHLKPIETSINYYGATKFLKV 317
Query: 329 EFVQGQTCRWGLAWSFV 345
+ QGQ +AW+FV
Sbjct: 318 DMGQGQKQSRFVAWTFV 334
>gi|372489834|ref|YP_005029399.1| putative SAM-dependent methyltransferase [Dechlorosoma suillum PS]
gi|359356387|gb|AEV27558.1| putative SAM-dependent methyltransferase [Dechlorosoma suillum PS]
Length = 319
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 168/351 (47%), Gaps = 74/351 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N+++ DFA LA++ P F+ + G P ID+ + A + L + LL D
Sbjct: 11 KPGLHPRNRHAHGY-DFATLAAITPELARFIVTTPAGSPSIDFANPKAVKALNKALLEAD 69
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANC 128
+G++ W IP G LCP +P R++ +H + D+L+ IPT G++V+ DIG GAN
Sbjct: 70 YGVSGWDIPPGYLCPPIPGRADLLHHLADMLAEGNEGRIPT----GERVRVLDIGVGANG 125
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YPL+G + GW FVG D +L+ + + +N H++ IE+R
Sbjct: 126 VYPLIGHAEYGWRFVGVDTEQKSLDNVARILAANEHLAGAIELRH--------------- 170
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ V D + VGV+R GE+FD +CN
Sbjct: 171 -QPVPDN-----------------------------------IFVGVLRSGEKFDLTLCN 194
Query: 249 PPFFESMEEA-----------GLNP---KTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
PPF S +A G P ++ GG E+ GGERAF+TR+IE S +
Sbjct: 195 PPFHASAADARFASERKQKNLGQTPGKGGSNFGGQDNELWYPGGERAFLTRLIEQSAGIP 254
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W+++++ + NL+ + + L KV T + QGQ WSFV
Sbjct: 255 KRALWFSALISKAENLRHVEAALAKVKPTASRIIPMSQGQKQSRLAVWSFV 305
>gi|260597200|ref|YP_003209771.1| 23S rRNA mA1618 methyltransferase [Cronobacter turicensis z3032]
gi|260216377|emb|CBA29423.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
turicensis z3032]
Length = 327
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 163/363 (44%), Gaps = 77/363 (21%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
RR+ +P +HP+N++ DF L P+ FV S G P +D+ D A + L
Sbjct: 15 RRKPMNRKPGLHPRNRHHSRY-DFEALTQSCPALGAFVRPSPTGEPTVDFADPQAVKTLN 73
Query: 66 RVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG----F 120
+ LL H +G+ W IP+G LCP VP R++YIH + DLL+ + NG +
Sbjct: 74 QTLLAHFYGVREWDIPEGFLCPPVPGRADYIHHLADLLAES-------NGGALAAQASVL 126
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIG GANCIYPL+G GW F G+D +D A+ A V +NP ++ I +R+ + T
Sbjct: 127 DIGVGANCIYPLIGQHEYGWRFTGTDTSDEAIRSASAIVDANPGLNRAIRLRR----QKT 182
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
P + G++ E
Sbjct: 183 PGA-----------------------------------------------IFNGIIHKNE 195
Query: 241 QFDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRII 287
+D +CNPPF +S + A GL + GG +E+ C GGE FIT++I
Sbjct: 196 SYDATLCNPPFHDSADAAEAGNARKRRNLGLAADSGLNFGGQQQELWCEGGEVGFITQMI 255
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347
+S + W+T++V + NL L L + G V E QGQ +AWSF+
Sbjct: 256 AESKPFARQVLWFTTLVSKGDNLPLLYRALEQAGAVKVVKKEMAQGQKQSRFIAWSFLDT 315
Query: 348 ARK 350
A++
Sbjct: 316 AQR 318
>gi|254445294|ref|ZP_05058770.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
gi|198259602|gb|EDY83910.1| conserved hypothetical protein [Verrucomicrobiae bacterium DG1235]
Length = 309
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 71/347 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DFA L + P F+ + G ID+ D A R L LL H +G+
Sbjct: 16 LHPRNPH-QGRYDFAALVAACPELAAFLRPNPKGDQTIDFGDEGAVRALNGALLAHHYGV 74
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++ IH++ DLLS + R G +V+ DIGTGANCIYP+LG
Sbjct: 75 KHWMIPMGYLCPPIPGRADVIHYLADLLSDSNGGEIPR-GKRVRALDIGTGANCIYPILG 133
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW FVG+D+ + A++ A V+SN + +LI++ + N +S
Sbjct: 134 SRSYGWQFVGTDIDNTAVKTARLIVESNACLRKLIKVVQQKNRDS--------------- 178
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G++R ++FD +CNPPF S
Sbjct: 179 ------------------------------------IFKGIIRPDDRFDLTLCNPPFHGS 202
Query: 255 MEEA-------------GLNPKTS----CGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
EEA G K + GG E+ C+GGE F++++I +SVA +
Sbjct: 203 AEEAQAANQRKRSNLSKGSRVKKTDTLNFGGQQAELWCAGGELRFVSQMIRESVAFGEQV 262
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++S++ + +L L +L + G + V+ E QGQ LAW F
Sbjct: 263 GWFSSLISKSEHLPALKKELGRSGASQVEVLEMRQGQKVSRLLAWRF 309
>gi|308501921|ref|XP_003113145.1| CRE-METT-10 protein [Caenorhabditis remanei]
gi|308265446|gb|EFP09399.1| CRE-METT-10 protein [Caenorhabditis remanei]
Length = 481
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 165/356 (46%), Gaps = 78/356 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N Y PPDF LA YP F F Y +G+ D+ A R LT+ LL
Sbjct: 3 QKNEMHPRNPYKNKPPDFKALAIEYPEFRKFCHYVSNGKVLFDFKKDAAVRCLTQTLLKK 62
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
D LN +P G L P VP + NY I+D+L +N I ++N V G DIGTG +CI+
Sbjct: 63 DFRLNVELPTGHLVPRVPQKLNYCLLIDDILKANEI---TKN---VVGIDIGTGTSCIHA 116
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+GA GW FV +D + +++ A NV N +++ I + V+ P+++ L
Sbjct: 117 LIGARHFGWKFVATDGDEKSVQVAHDNVARN-DMNDSICVVHVN-----PAVKTVL---- 166
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+D+ M + F FC+CNPPF
Sbjct: 167 ------IDVINSMQD---------------------------------SDFSFCMCNPPF 187
Query: 252 FESME----------------------EAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
FE E E P + + E+ GGE AF+ RII+D
Sbjct: 188 FEKSEQNDRFCEEPSVSQDTYTNNLSSEVRSAPHSETIASSAELYVDGGEIAFVNRIIDD 247
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI-VKTTEFVQGQTCRWGLAWSF 344
SV L+ + YT+M+GRKS+LK L +L++ G + QG+T RW LAW+F
Sbjct: 248 SVCLRDRVKIYTTMIGRKSSLKPLQQRLQRFGEDVKFMVHPLNQGKTKRWMLAWTF 303
>gi|422782356|ref|ZP_16835141.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW10509]
gi|323976807|gb|EGB71895.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW10509]
Length = 308
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNSELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GSD + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSDTSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|392868868|gb|EAS30220.2| hypothetical protein CIMG_05470 [Coccidioides immitis RS]
Length = 432
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 180/359 (50%), Gaps = 76/359 (21%)
Query: 18 PKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNW 77
P+N Y ++ DF LA P F F+ + ++D+ D A R+LT+ LL D LN
Sbjct: 4 PRNIYRQDV-DFRSLALEDPDFAKFLKVN----GQLDFNDPGAVRQLTKSLLRRDFKLNV 58
Query: 78 WIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNG----DKVKGFDIGTGANCIYPLL 133
+ D +LCP VPNR NY+ W++DL+ + R G +V G DIGTGA+CIYPLL
Sbjct: 59 ELSDDRLCPPVPNRFNYVLWLQDLIDTT--NDDYRGGYDPEREVIGLDIGTGASCIYPLL 116
Query: 134 G-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
A W FV +D+ D ++A++NV K +N +S +
Sbjct: 117 ACAQRPKWMFVATDINDKNFQYAQENV-------------KRNNLQSRIRV--------- 154
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+++ P + +G E+ F +CNPPF+
Sbjct: 155 -----------------------------VKTTAEDPLIALGDKVPFERLQFTMCNPPFY 185
Query: 253 ESMEE----AGLN---PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
ES EE A L P ++C G P EMV +GGE +F+ RII++S+ L+ +WYTSM+G
Sbjct: 186 ESEEEMLASASLKHRPPNSACTGAPVEMVTAGGEESFVQRIIDESLKLRNKVQWYTSMLG 245
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVAEKKNLS 363
+ S++ LI KL + G TEFVQG +T RW +AWS+ + + P +A +N+S
Sbjct: 246 KLSSVTKLIEKLLESGNQNWAVTEFVQGSKTRRWAIAWSW-----RDLRPTMAVARNIS 299
>gi|422830787|ref|ZP_16878941.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
B093]
gi|371603798|gb|EHN92436.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
B093]
Length = 308
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 161/350 (46%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ + D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-HSSYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ + IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEATGSIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|168787022|ref|ZP_02812029.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|261225455|ref|ZP_05939736.1| putative SAM-dependent methyltransferase [Escherichia coli O157:H7
str. FRIK2000]
gi|261258576|ref|ZP_05951109.1| putative SAM-dependent methyltransferase [Escherichia coli O157:H7
str. FRIK966]
gi|387505913|ref|YP_006158169.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|416781908|ref|ZP_11877377.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H7 str.
G5101]
gi|416815431|ref|ZP_11891867.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O55:H7 str.
3256-97]
gi|416825263|ref|ZP_11896451.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O55:H7 str.
USDA 5905]
gi|416836109|ref|ZP_11901724.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H7 str.
LSU-61]
gi|419091086|ref|ZP_13636403.1| 23S rRNA methyltransferase [Escherichia coli DEC4C]
gi|419096763|ref|ZP_13642005.1| 23S rRNA methyltransferase [Escherichia coli DEC4D]
gi|419102586|ref|ZP_13647751.1| 23S rRNA methyltransferase [Escherichia coli DEC4E]
gi|419113721|ref|ZP_13658751.1| 23S rRNA methyltransferase [Escherichia coli DEC5A]
gi|419119359|ref|ZP_13664337.1| 23S rRNA methyltransferase [Escherichia coli DEC5B]
gi|419125123|ref|ZP_13670020.1| 23S rRNA methyltransferase [Escherichia coli DEC5C]
gi|419130606|ref|ZP_13675453.1| 23S rRNA methyltransferase [Escherichia coli DEC5D]
gi|419135332|ref|ZP_13680138.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC5E]
gi|420273886|ref|ZP_14776218.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA40]
gi|420302850|ref|ZP_14804876.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW10119]
gi|421822562|ref|ZP_16257999.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK920]
gi|422835695|ref|ZP_16883748.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
E101]
gi|424088710|ref|ZP_17824956.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1996]
gi|424101342|ref|ZP_17836487.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1990]
gi|424466850|ref|ZP_17917029.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA41]
gi|424491591|ref|ZP_17939931.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW09195]
gi|424518655|ref|ZP_17963079.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW14301]
gi|425142394|ref|ZP_18542681.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
10.0869]
gi|425178500|ref|ZP_18576542.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1999]
gi|425191403|ref|ZP_18588519.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
NE1487]
gi|425204379|ref|ZP_18600499.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK2001]
gi|425241292|ref|ZP_18634920.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
MA6]
gi|425247421|ref|ZP_18640616.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
5905]
gi|425259431|ref|ZP_18651790.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC96038]
gi|428945412|ref|ZP_19018027.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
88.1467]
gi|428963734|ref|ZP_19034895.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
90.0091]
gi|428969887|ref|ZP_19040500.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
90.0039]
gi|429000278|ref|ZP_19068764.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
95.0183]
gi|429031052|ref|ZP_19096903.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0939]
gi|429037204|ref|ZP_19102628.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0932]
gi|429065448|ref|ZP_19129288.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0672]
gi|444923232|ref|ZP_21242911.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
09BKT078844]
gi|444973548|ref|ZP_21290816.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1805]
gi|444979094|ref|ZP_21296079.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
ATCC 700728]
gi|445011057|ref|ZP_21327241.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA48]
gi|445022326|ref|ZP_21338240.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
7.1982]
gi|189373085|gb|EDU91501.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC869]
gi|320637669|gb|EFX07461.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H7 str.
G5101]
gi|320654088|gb|EFX22156.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659711|gb|EFX27267.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664182|gb|EFX31333.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H7 str.
LSU-61]
gi|371611874|gb|EHO00393.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
E101]
gi|374357907|gb|AEZ39614.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|377949245|gb|EHV12885.1| 23S rRNA methyltransferase [Escherichia coli DEC4C]
gi|377950201|gb|EHV13829.1| 23S rRNA methyltransferase [Escherichia coli DEC4D]
gi|377953754|gb|EHV17318.1| 23S rRNA methyltransferase [Escherichia coli DEC4E]
gi|377964421|gb|EHV27856.1| 23S rRNA methyltransferase [Escherichia coli DEC5A]
gi|377971002|gb|EHV34359.1| 23S rRNA methyltransferase [Escherichia coli DEC5B]
gi|377979052|gb|EHV42330.1| 23S rRNA methyltransferase [Escherichia coli DEC5C]
gi|377979177|gb|EHV42454.1| 23S rRNA methyltransferase [Escherichia coli DEC5D]
gi|377986481|gb|EHV49671.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC5E]
gi|390649910|gb|EIN28382.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1996]
gi|390671901|gb|EIN48270.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1990]
gi|390761973|gb|EIO31243.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA40]
gi|390775284|gb|EIO43351.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA41]
gi|390818675|gb|EIO85044.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW10119]
gi|390839734|gb|EIP03821.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW09195]
gi|390854852|gb|EIP17629.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW14301]
gi|408075744|gb|EKH09976.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK920]
gi|408109319|gb|EKH41246.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1999]
gi|408121083|gb|EKH52047.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
NE1487]
gi|408130975|gb|EKH61036.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK2001]
gi|408170878|gb|EKH98028.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
MA6]
gi|408172875|gb|EKH99927.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
5905]
gi|408190466|gb|EKI16111.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC96038]
gi|408603398|gb|EKK77039.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
10.0869]
gi|427215689|gb|EKV84857.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
88.1467]
gi|427233020|gb|EKW00806.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
90.0039]
gi|427234620|gb|EKW02297.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
90.0091]
gi|427269513|gb|EKW34470.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
95.0183]
gi|427292682|gb|EKW56009.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0939]
gi|427305325|gb|EKW67920.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0932]
gi|427336343|gb|EKW97321.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0672]
gi|444549584|gb|ELV27821.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
09BKT078844]
gi|444598684|gb|ELV73597.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
ATCC 700728]
gi|444606877|gb|ELV81478.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1805]
gi|444631198|gb|ELW04802.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA48]
gi|444646609|gb|ELW19611.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
7.1982]
Length = 308
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|217971344|ref|YP_002356095.1| putative SAM-dependent methyltransferase [Shewanella baltica OS223]
gi|254807097|sp|B8E3W0.1|RLMF_SHEB2 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|217496479|gb|ACK44672.1| protein of unknown function DUF890 [Shewanella baltica OS223]
Length = 365
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 164/366 (44%), Gaps = 75/366 (20%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K R R E + +HP+N + N DF L S +P + FV + G ID+ D A + L
Sbjct: 45 KDRPRVEIKKALHPRNAHL-NGYDFPALISAFPRLKTFVRPTPYGALSIDFADPLAVKTL 103
Query: 65 TRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LL H +G+ W IP G LCP +P R +Y+H++ DLL+ S K + DIG
Sbjct: 104 NAALLKHHYGIGAWDIPQGALCPPIPGRVDYVHYVADLLAEG---DKSCAISKARVLDIG 160
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP+LG+ + GW FV SD++ +L + ++ NP + I +R
Sbjct: 161 TGANGIYPILGSQVYGWQFVASDISAHSLTNVQSIIEQNPALQGRISLR----------- 209
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+P + F G+V+ E+F+
Sbjct: 210 ------------------------LQPDDKAVFK----------------GIVQPEERFE 229
Query: 244 FCICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFIT 284
+CNPPF SM EA LN PK + GG E+ C GGER F+
Sbjct: 230 LTLCNPPFHASMAEASEGTKRKVNNLQLNRGSSVKAAPKLNFGGQAAELWCQGGERQFLA 289
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I +S W+TS+V ++ NLK L ++ V VKT E QG LAWSF
Sbjct: 290 TMIRESQMFADQCLWFTSLVSKQENLKPCYQALAQLKVDTVKTIEMQQGNKITRVLAWSF 349
Query: 345 VPPARK 350
A++
Sbjct: 350 QSAAKR 355
>gi|291281804|ref|YP_003498622.1| hypothetical protein G2583_1035 [Escherichia coli O55:H7 str.
CB9615]
gi|209775834|gb|ACI86229.1| hypothetical protein ECs0885 [Escherichia coli]
gi|290761677|gb|ADD55638.1| hypothetical protein G2583_1035 [Escherichia coli O55:H7 str.
CB9615]
Length = 335
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|432371544|ref|ZP_19614597.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE11]
gi|430898982|gb|ELC21088.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE11]
Length = 308
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 162/350 (46%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ + IP ++ DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEATGTIPASA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F G++ AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGTETNSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +S+ FN G++ EQ+D +CN
Sbjct: 162 --------------------QKENSAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNRDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|345563518|gb|EGX46518.1| hypothetical protein AOL_s00109g90 [Arthrobotrys oligospora ATCC
24927]
Length = 508
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 167/338 (49%), Gaps = 64/338 (18%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HPKN Y +N FA LA P + G I++ D + R+L + LL + L
Sbjct: 1 MHPKNVY-KNGVSFAQLAKESPGLAKCL----KGSTSINFHDPESIRQLAKALLKKEFNL 55
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG- 134
+P+ +LCP VPNR NYI W+ DL+ +S KV G DIGTGA+ IYPLLG
Sbjct: 56 EVDLPEDRLCPGVPNRLNYILWLNDLILDTHEERSSPGPPKVTGIDIGTGASAIYPLLGC 115
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A W F +++ +L A N+ N ++++ +T V
Sbjct: 116 AQFPTWRFFATEIDSKSLSSAANNISQN-------------------TLEDRITLLDV-- 154
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
SSSS LP G SY P DF +CNPPF+ S
Sbjct: 155 -----------------SSSSTILPEGEIISYSQP------------IDFTMCNPPFYTS 185
Query: 255 MEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
+ + + P ++C G+ EMV GGE AF+ R++E+S+ LK+ RWYTSM+G++
Sbjct: 186 INDMLSSAKTKAVPPLSACTGSTTEMVTDGGEVAFVNRMVEESLKLKEKVRWYTSMLGKR 245
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
S+++ ++ KL++ GV EFVQG +T RW + WSF
Sbjct: 246 SSVEKVVEKLKESGVANYVVGEFVQGAKTKRWAVGWSF 283
>gi|392398651|ref|YP_006435252.1| SAM-dependent methyltransferase [Flexibacter litoralis DSM 6794]
gi|390529729|gb|AFM05459.1| putative SAM-dependent methyltransferase [Flexibacter litoralis DSM
6794]
Length = 289
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 162/348 (46%), Gaps = 78/348 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N ++ + +F L + P+ + FVF ++ ID+ + A EL + LL H H +
Sbjct: 1 MHPNNIHN-SFYNFEKLIASNPALKEFVFINQHKIETIDFANEKAVLELNKSLLAHHHDV 59
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
NW IPDG LCP +P+R++Y++++ DLL + N +KG DIG GANCIYP+L
Sbjct: 60 KNWNIPDGYLCPPIPSRADYLYYLNDLLEA------EANKKTIKGLDIGVGANCIYPILA 113
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ L W VG+D+ A+E A KNV+++ + E IEIR
Sbjct: 114 SQLFDWKMVGADIDKTAIESAIKNVETSSKLKENIEIR--------------------YQ 153
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ESN + + G++ + E FDF ICNPPF S
Sbjct: 154 ESNAN-------------------------------IFKGIINENEYFDFTICNPPFHAS 182
Query: 255 MEEAGLNP------------------KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
++A K + GG E+ C+GGE FI R+I+ SV K
Sbjct: 183 EKDANSAALRKVKNLKSDSKVGEKTIKLNFGGQANELWCNGGEALFIKRMIKQSVEFKNQ 242
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+T++V + NLK + +L K+ KT QG +AW F
Sbjct: 243 VNWFTTLVSKGGNLKAIYKQLDKLKAE-HKTINMEQGNKKTRFIAWKF 289
>gi|416288880|ref|ZP_11649407.1| Ribosomal RNA large subunit methyltransferase F [Shigella boydii
ATCC 9905]
gi|320177856|gb|EFW52842.1| Ribosomal RNA large subunit methyltransferase F [Shigella boydii
ATCC 9905]
Length = 308
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R N L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENFPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|15800559|ref|NP_286571.1| SAM-dependent methyltransferase [Escherichia coli O157:H7 str.
EDL933]
gi|15830139|ref|NP_308912.1| SAM-dependent methyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|387881419|ref|YP_006311721.1| putative SAM-dependent methyltransferase [Escherichia coli
Xuzhou21]
gi|12513803|gb|AAG55179.1|AE005261_9 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13360344|dbj|BAB34308.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209775830|gb|ACI86227.1| hypothetical protein ECs0885 [Escherichia coli]
gi|209775832|gb|ACI86228.1| hypothetical protein ECs0885 [Escherichia coli]
gi|209775836|gb|ACI86230.1| hypothetical protein ECs0885 [Escherichia coli]
gi|386794877|gb|AFJ27911.1| putative SAM-dependent methyltransferase [Escherichia coli
Xuzhou21]
Length = 335
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSECKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|300939844|ref|ZP_07154481.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|416896386|ref|ZP_11926233.1| hypothetical protein ECSTEC7V_1018 [Escherichia coli STEC_7v]
gi|417118780|ref|ZP_11969298.1| rRNA adenine N-6-methyltransferase [Escherichia coli 1.2741]
gi|419699668|ref|ZP_14227281.1| 23S rRNA mA1618 methyltransferase [Escherichia coli SCI-07]
gi|419911655|ref|ZP_14430125.1| putative SAM-dependent methyltransferase [Escherichia coli KD1]
gi|422368919|ref|ZP_16449323.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|422379069|ref|ZP_16459272.1| hypothetical protein HMPREF9532_00589 [Escherichia coli MS 57-2]
gi|422800164|ref|ZP_16848662.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
M863]
gi|432679225|ref|ZP_19914624.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE143]
gi|432731472|ref|ZP_19966308.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE45]
gi|432758551|ref|ZP_19993052.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE46]
gi|432897694|ref|ZP_20108525.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE192]
gi|433027788|ref|ZP_20215661.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE109]
gi|300455308|gb|EFK18801.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|315299327|gb|EFU58579.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|323967409|gb|EGB62830.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
M863]
gi|324009670|gb|EGB78889.1| hypothetical protein HMPREF9532_00589 [Escherichia coli MS 57-2]
gi|327253594|gb|EGE65223.1| hypothetical protein ECSTEC7V_1018 [Escherichia coli STEC_7v]
gi|380349213|gb|EIA37488.1| 23S rRNA mA1618 methyltransferase [Escherichia coli SCI-07]
gi|386138314|gb|EIG79474.1| rRNA adenine N-6-methyltransferase [Escherichia coli 1.2741]
gi|388393231|gb|EIL54620.1| putative SAM-dependent methyltransferase [Escherichia coli KD1]
gi|431224285|gb|ELF21512.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE143]
gi|431277727|gb|ELF68731.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE45]
gi|431311140|gb|ELF99318.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE46]
gi|431428421|gb|ELH10362.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE192]
gi|431545415|gb|ELI20070.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE109]
Length = 308
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ + IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEATGSIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|432542188|ref|ZP_19779044.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE236]
gi|432547658|ref|ZP_19784445.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE237]
gi|432620942|ref|ZP_19856983.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE76]
gi|432814396|ref|ZP_20048186.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE115]
gi|431076442|gb|ELD83937.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE236]
gi|431083594|gb|ELD89766.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE237]
gi|431161408|gb|ELE61879.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE76]
gi|431366619|gb|ELG53116.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE115]
Length = 308
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL + + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSVQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|168749985|ref|ZP_02775007.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|168756595|ref|ZP_02781602.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|168764287|ref|ZP_02789294.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|168767311|ref|ZP_02792318.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|168777210|ref|ZP_02802217.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|168779353|ref|ZP_02804360.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|168799917|ref|ZP_02824924.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|195936847|ref|ZP_03082229.1| putative SAM-dependent methyltransferase [Escherichia coli O157:H7
str. EC4024]
gi|208806190|ref|ZP_03248527.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208815382|ref|ZP_03256561.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208822018|ref|ZP_03262337.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209396578|ref|YP_002269477.1| SAM-dependent methyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|217324495|ref|ZP_03440579.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|254792002|ref|YP_003076839.1| SAM-dependent methyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|416309540|ref|ZP_11655912.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O157:H7 str. 1044]
gi|416317420|ref|ZP_11660461.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O157:H7 str. EC1212]
gi|416332177|ref|ZP_11670256.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O157:H7 str. 1125]
gi|419044030|ref|ZP_13591001.1| 23S rRNA methyltransferase [Escherichia coli DEC3A]
gi|419049448|ref|ZP_13596364.1| 23S rRNA methyltransferase [Escherichia coli DEC3B]
gi|419055529|ref|ZP_13602382.1| 23S rRNA methyltransferase [Escherichia coli DEC3C]
gi|419061101|ref|ZP_13607880.1| 23S rRNA methyltransferase [Escherichia coli DEC3D]
gi|419067199|ref|ZP_13613674.1| 23S rRNA methyltransferase [Escherichia coli DEC3E]
gi|419079210|ref|ZP_13624692.1| 23S rRNA methyltransferase [Escherichia coli DEC4A]
gi|419084847|ref|ZP_13630256.1| 23S rRNA methyltransferase [Escherichia coli DEC4B]
gi|419107948|ref|ZP_13653057.1| 23S rRNA methyltransferase [Escherichia coli DEC4F]
gi|420268248|ref|ZP_14770652.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA22]
gi|420285410|ref|ZP_14787625.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW10246]
gi|420296593|ref|ZP_14798686.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW09109]
gi|420308230|ref|ZP_14810202.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1738]
gi|420313958|ref|ZP_14815863.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1734]
gi|421811077|ref|ZP_16246876.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.0416]
gi|421817158|ref|ZP_16252713.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
10.0821]
gi|421829299|ref|ZP_16264626.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA7]
gi|423664735|ref|ZP_17639897.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA31]
gi|424075748|ref|ZP_17813088.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA505]
gi|424082077|ref|ZP_17818928.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA517]
gi|424094922|ref|ZP_17830667.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1985]
gi|424108141|ref|ZP_17842707.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
93-001]
gi|424114134|ref|ZP_17848270.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA3]
gi|424120192|ref|ZP_17853885.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA5]
gi|424126431|ref|ZP_17859626.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA9]
gi|424132538|ref|ZP_17865329.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA10]
gi|424139080|ref|ZP_17871365.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA14]
gi|424145522|ref|ZP_17877282.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA15]
gi|424151654|ref|ZP_17882900.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA24]
gi|424190146|ref|ZP_17888339.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA25]
gi|424271716|ref|ZP_17894247.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA28]
gi|424425464|ref|ZP_17899970.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA32]
gi|424454067|ref|ZP_17905593.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA33]
gi|424460382|ref|ZP_17911293.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA39]
gi|424473415|ref|ZP_17923075.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA42]
gi|424479346|ref|ZP_17928585.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW07945]
gi|424485415|ref|ZP_17934270.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW09098]
gi|424498635|ref|ZP_17945897.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4203]
gi|424504869|ref|ZP_17951630.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4196]
gi|424511119|ref|ZP_17957332.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW14313]
gi|424524514|ref|ZP_17968528.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4421]
gi|424530718|ref|ZP_17974333.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4422]
gi|424536695|ref|ZP_17979945.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4013]
gi|424542614|ref|ZP_17985412.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4402]
gi|424548932|ref|ZP_17991122.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4439]
gi|424555178|ref|ZP_17996891.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4436]
gi|424561534|ref|ZP_18002814.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4437]
gi|424567563|ref|ZP_18008467.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4448]
gi|424573756|ref|ZP_18014166.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1845]
gi|424579704|ref|ZP_18019625.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1863]
gi|425096375|ref|ZP_18499388.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
3.4870]
gi|425102519|ref|ZP_18505159.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
5.2239]
gi|425108324|ref|ZP_18510562.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
6.0172]
gi|425124160|ref|ZP_18525718.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.0586]
gi|425130190|ref|ZP_18531279.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.2524]
gi|425136554|ref|ZP_18537268.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
10.0833]
gi|425148743|ref|ZP_18548620.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
88.0221]
gi|425154348|ref|ZP_18553890.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA34]
gi|425160794|ref|ZP_18559965.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA506]
gi|425166321|ref|ZP_18565122.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA507]
gi|425184643|ref|ZP_18582257.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1997]
gi|425197712|ref|ZP_18594354.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
NE037]
gi|425210131|ref|ZP_18605857.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA4]
gi|425216183|ref|ZP_18611488.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA23]
gi|425222765|ref|ZP_18617607.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA49]
gi|425228992|ref|ZP_18623375.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA45]
gi|425235295|ref|ZP_18629249.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TT12B]
gi|425253155|ref|ZP_18646014.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
CB7326]
gi|425293014|ref|ZP_18683582.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA38]
gi|425309746|ref|ZP_18699200.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1735]
gi|425315667|ref|ZP_18704730.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1736]
gi|425321734|ref|ZP_18710392.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1737]
gi|425327927|ref|ZP_18716133.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1846]
gi|425334112|ref|ZP_18721814.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1847]
gi|425346391|ref|ZP_18733182.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1849]
gi|425352628|ref|ZP_18738992.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1850]
gi|425358615|ref|ZP_18744572.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1856]
gi|425364730|ref|ZP_18750256.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1862]
gi|425371173|ref|ZP_18756119.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1864]
gi|425383969|ref|ZP_18767832.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1866]
gi|425390659|ref|ZP_18774099.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1868]
gi|425396778|ref|ZP_18779807.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1869]
gi|425402765|ref|ZP_18785356.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1870]
gi|425409304|ref|ZP_18791442.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
NE098]
gi|425415585|ref|ZP_18797205.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK523]
gi|425426718|ref|ZP_18807757.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
0.1304]
gi|428951547|ref|ZP_19023654.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
88.1042]
gi|428957412|ref|ZP_19029079.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
89.0511]
gi|428976347|ref|ZP_19046501.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
90.2281]
gi|428982070|ref|ZP_19051787.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
93.0055]
gi|428988341|ref|ZP_19057608.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
93.0056]
gi|428994141|ref|ZP_19063032.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
94.0618]
gi|429006460|ref|ZP_19074350.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
95.1288]
gi|429012796|ref|ZP_19080033.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
95.0943]
gi|429018999|ref|ZP_19085764.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0428]
gi|429024719|ref|ZP_19091109.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0427]
gi|429043175|ref|ZP_19108155.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0107]
gi|429048893|ref|ZP_19113546.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
97.0003]
gi|429054290|ref|ZP_19118770.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
97.1742]
gi|429059941|ref|ZP_19124073.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
97.0007]
gi|429071973|ref|ZP_19135319.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0678]
gi|429077299|ref|ZP_19140507.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0713]
gi|429824541|ref|ZP_19356011.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0109]
gi|429830897|ref|ZP_19361710.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
97.0010]
gi|444929536|ref|ZP_21248676.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0814]
gi|444934828|ref|ZP_21253754.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0815]
gi|444940425|ref|ZP_21259060.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0816]
gi|444945965|ref|ZP_21264376.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0839]
gi|444951570|ref|ZP_21269782.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0848]
gi|444957044|ref|ZP_21275031.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1753]
gi|444962295|ref|ZP_21280034.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1775]
gi|444968044|ref|ZP_21285510.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1793]
gi|444984383|ref|ZP_21301243.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA11]
gi|444989629|ref|ZP_21306360.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA19]
gi|444994975|ref|ZP_21311563.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA13]
gi|445000487|ref|ZP_21316941.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA2]
gi|445005946|ref|ZP_21322276.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA47]
gi|445016891|ref|ZP_21332933.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA8]
gi|445027585|ref|ZP_21343353.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1781]
gi|445033085|ref|ZP_21348698.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1762]
gi|445038775|ref|ZP_21354237.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA35]
gi|445044076|ref|ZP_21359403.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
3.4880]
gi|445049569|ref|ZP_21364725.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
95.0083]
gi|445055221|ref|ZP_21370162.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0670]
gi|452970941|ref|ZP_21969168.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H7 str.
EC4009]
gi|205829589|sp|Q8X7W6.2|RLMF_ECO57 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807081|sp|B5YS99.1|RLMF_ECO5E RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|187767508|gb|EDU31352.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4196]
gi|188015718|gb|EDU53840.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4113]
gi|189002917|gb|EDU71903.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4076]
gi|189356237|gb|EDU74656.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4401]
gi|189363518|gb|EDU81937.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4486]
gi|189365691|gb|EDU84107.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4501]
gi|189377739|gb|EDU96155.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC508]
gi|208725991|gb|EDZ75592.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4206]
gi|208732030|gb|EDZ80718.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4045]
gi|208737503|gb|EDZ85186.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4042]
gi|209157978|gb|ACI35411.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
EC4115]
gi|217320716|gb|EEC29140.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
TW14588]
gi|254591402|gb|ACT70763.1| predicted SAM-dependent methyltransferase [Escherichia coli O157:H7
str. TW14359]
gi|320192716|gb|EFW67357.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O157:H7 str. EC1212]
gi|326338305|gb|EGD62134.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O157:H7 str. 1125]
gi|326346283|gb|EGD70021.1| Ribosomal RNA large subunit methyltransferase F [Escherichia coli
O157:H7 str. 1044]
gi|377899649|gb|EHU63995.1| 23S rRNA methyltransferase [Escherichia coli DEC3A]
gi|377901510|gb|EHU65826.1| 23S rRNA methyltransferase [Escherichia coli DEC3B]
gi|377913121|gb|EHU77265.1| 23S rRNA methyltransferase [Escherichia coli DEC3C]
gi|377917187|gb|EHU81252.1| 23S rRNA methyltransferase [Escherichia coli DEC3D]
gi|377919867|gb|EHU83901.1| 23S rRNA methyltransferase [Escherichia coli DEC3E]
gi|377933317|gb|EHU97162.1| 23S rRNA methyltransferase [Escherichia coli DEC4A]
gi|377938219|gb|EHV01987.1| 23S rRNA methyltransferase [Escherichia coli DEC4B]
gi|377966315|gb|EHV29727.1| 23S rRNA methyltransferase [Escherichia coli DEC4F]
gi|390651683|gb|EIN29953.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA517]
gi|390652282|gb|EIN30506.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA505]
gi|390669067|gb|EIN45772.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
93-001]
gi|390672437|gb|EIN48739.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1985]
gi|390687806|gb|EIN62951.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA3]
gi|390690695|gb|EIN65481.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA9]
gi|390691375|gb|EIN66123.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA5]
gi|390707495|gb|EIN80839.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA10]
gi|390709357|gb|EIN82467.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA15]
gi|390710532|gb|EIN83550.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA14]
gi|390719555|gb|EIN92280.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA22]
gi|390732563|gb|EIO04248.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA25]
gi|390732733|gb|EIO04411.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA24]
gi|390735443|gb|EIO06837.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA28]
gi|390750938|gb|EIO20914.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA31]
gi|390751336|gb|EIO21251.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA32]
gi|390754156|gb|EIO23778.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA33]
gi|390776890|gb|EIO44769.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA42]
gi|390780840|gb|EIO48530.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA39]
gi|390794273|gb|EIO61572.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW10246]
gi|390808146|gb|EIO74992.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW07945]
gi|390811331|gb|EIO78045.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW09109]
gi|390821608|gb|EIO87791.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW09098]
gi|390836350|gb|EIP00903.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4203]
gi|390838951|gb|EIP03128.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4196]
gi|390857543|gb|EIP19971.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW14313]
gi|390857938|gb|EIP20359.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4421]
gi|390870521|gb|EIP32022.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4422]
gi|390874967|gb|EIP36049.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4013]
gi|390884687|gb|EIP44960.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4402]
gi|390887193|gb|EIP47179.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4439]
gi|390893023|gb|EIP52591.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4436]
gi|390903625|gb|EIP62671.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1738]
gi|390908462|gb|EIP67285.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4437]
gi|390911452|gb|EIP70157.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1734]
gi|390913439|gb|EIP72025.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC4448]
gi|390924118|gb|EIP81920.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1863]
gi|390925716|gb|EIP83349.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1845]
gi|408071626|gb|EKH05961.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA7]
gi|408085399|gb|EKH19023.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA34]
gi|408089235|gb|EKH22566.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA506]
gi|408094028|gb|EKH27073.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA507]
gi|408115769|gb|EKH47134.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK1997]
gi|408129287|gb|EKH59520.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
NE037]
gi|408140204|gb|EKH69739.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA4]
gi|408149450|gb|EKH78128.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA23]
gi|408151294|gb|EKH79802.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA49]
gi|408156458|gb|EKH84660.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA45]
gi|408166167|gb|EKH93785.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TT12B]
gi|408186155|gb|EKI12262.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
CB7326]
gi|408231881|gb|EKI55141.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA38]
gi|408237539|gb|EKI60394.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1735]
gi|408248448|gb|EKI70497.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1736]
gi|408252111|gb|EKI73808.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1737]
gi|408258287|gb|EKI79561.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1846]
gi|408267242|gb|EKI87706.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1847]
gi|408278193|gb|EKI97955.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1849]
gi|408284025|gb|EKJ03154.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1850]
gi|408286640|gb|EKJ05559.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1856]
gi|408299285|gb|EKJ17096.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1862]
gi|408299875|gb|EKJ17640.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1864]
gi|408315591|gb|EKJ31906.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1868]
gi|408315924|gb|EKJ32222.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1866]
gi|408330465|gb|EKJ45728.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1869]
gi|408335356|gb|EKJ50202.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
NE098]
gi|408337000|gb|EKJ51746.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1870]
gi|408349654|gb|EKJ63576.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FRIK523]
gi|408352606|gb|EKJ66150.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
0.1304]
gi|408557715|gb|EKK34138.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
5.2239]
gi|408557989|gb|EKK34404.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
3.4870]
gi|408558721|gb|EKK35080.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
6.0172]
gi|408584556|gb|EKK59556.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.0586]
gi|408588580|gb|EKK63152.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.2524]
gi|408589971|gb|EKK64470.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
10.0833]
gi|408605149|gb|EKK78678.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
8.0416]
gi|408606651|gb|EKK80077.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
88.0221]
gi|408616351|gb|EKK89506.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
10.0821]
gi|427213717|gb|EKV83117.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
88.1042]
gi|427215426|gb|EKV84608.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
89.0511]
gi|427232890|gb|EKW00689.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
90.2281]
gi|427250395|gb|EKW17066.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
93.0056]
gi|427251954|gb|EKW18476.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
93.0055]
gi|427253253|gb|EKW19695.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
94.0618]
gi|427269673|gb|EKW34625.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
95.0943]
gi|427274005|gb|EKW38670.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
95.1288]
gi|427285657|gb|EKW49596.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0428]
gi|427291126|gb|EKW54570.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0427]
gi|427304294|gb|EKW66951.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
97.0003]
gi|427309403|gb|EKW71721.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0107]
gi|427320792|gb|EKW82526.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
97.1742]
gi|427321357|gb|EKW83051.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
97.0007]
gi|427333191|gb|EKW94301.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0713]
gi|427333404|gb|EKW94509.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0678]
gi|429259300|gb|EKY42997.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
96.0109]
gi|429261357|gb|EKY44802.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
97.0010]
gi|444541835|gb|ELV21271.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0814]
gi|444551253|gb|ELV29224.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0815]
gi|444564139|gb|ELV41096.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0839]
gi|444565971|gb|ELV42809.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0816]
gi|444570176|gb|ELV46718.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0848]
gi|444581104|gb|ELV56972.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1753]
gi|444584378|gb|ELV60023.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1775]
gi|444585239|gb|ELV60817.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1793]
gi|444599249|gb|ELV74139.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA11]
gi|444613410|gb|ELV87669.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA19]
gi|444613525|gb|ELV87783.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA13]
gi|444621840|gb|ELV95808.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA2]
gi|444631462|gb|ELW05060.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA47]
gi|444636230|gb|ELW09632.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA8]
gi|444649279|gb|ELW22180.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1781]
gi|444652599|gb|ELW25357.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.1762]
gi|444661724|gb|ELW34012.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
PA35]
gi|444665888|gb|ELW37982.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
3.4880]
gi|444671968|gb|ELW43728.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
95.0083]
gi|444674019|gb|ELW45603.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
99.0670]
Length = 308
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSECKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|300907136|ref|ZP_07124801.1| hypothetical protein HMPREF9536_05092 [Escherichia coli MS 84-1]
gi|301303564|ref|ZP_07209686.1| hypothetical protein HMPREF9347_02159 [Escherichia coli MS 124-1]
gi|415860765|ref|ZP_11534480.1| putative methyltransferase YbiN [Escherichia coli MS 85-1]
gi|300401103|gb|EFJ84641.1| hypothetical protein HMPREF9536_05092 [Escherichia coli MS 84-1]
gi|300841063|gb|EFK68823.1| hypothetical protein HMPREF9347_02159 [Escherichia coli MS 124-1]
gi|315257795|gb|EFU37763.1| putative methyltransferase YbiN [Escherichia coli MS 85-1]
Length = 308
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ + D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-HSCYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + SNP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|293414085|ref|ZP_06656734.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
B185]
gi|417627733|ref|ZP_12277980.1| hypothetical protein ECSTECMHI813_0651 [Escherichia coli
STEC_MHI813]
gi|432453562|ref|ZP_19695799.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE193]
gi|433032302|ref|ZP_20220076.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE112]
gi|291434143|gb|EFF07116.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
B185]
gi|345378037|gb|EGX09968.1| hypothetical protein ECSTECMHI813_0651 [Escherichia coli
STEC_MHI813]
gi|430973701|gb|ELC90646.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE193]
gi|431558688|gb|ELI32297.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE112]
Length = 308
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|432945999|ref|ZP_20141737.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE196]
gi|433042310|ref|ZP_20229834.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE117]
gi|431462332|gb|ELH42546.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE196]
gi|431559513|gb|ELI33066.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE117]
Length = 308
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDAILCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFL 295
>gi|262041105|ref|ZP_06014323.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041555|gb|EEW42608.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 304
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 166/357 (46%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S +P + DIGTGA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAGDSGEVPKDATI------LDIGTGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
N IYPL+GA GW F GS++ A A+ + NP ++ I +R++ S++
Sbjct: 115 NLIYPLIGAHEYGWRFTGSEINPQAFASAQAIINGNPGLTRQIRLRRLKESQA------- 167
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ GV+ E +D +
Sbjct: 168 --------------------------------------------IFHGVIHKNEAYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S E A GL ++ GG +E+ C GGE AFI+++I +S A
Sbjct: 184 CNPPFHDSAESARAGGERKRRNLGLGAESGLNFGGQQQELWCEGGEVAFISQMIRESQAF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L +VG V E QGQ +AWSF+ A++
Sbjct: 244 ARQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR 300
>gi|312969169|ref|ZP_07783376.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|417754666|ref|ZP_12402757.1| 23S rRNA methyltransferase [Escherichia coli DEC2B]
gi|418995809|ref|ZP_13543416.1| 23S rRNA methyltransferase [Escherichia coli DEC1A]
gi|419001026|ref|ZP_13548578.1| 23S rRNA methyltransferase [Escherichia coli DEC1B]
gi|419006524|ref|ZP_13553977.1| 23S rRNA methyltransferase [Escherichia coli DEC1C]
gi|419012361|ref|ZP_13559725.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC1D]
gi|419017358|ref|ZP_13564677.1| 23S rRNA methyltransferase [Escherichia coli DEC1E]
gi|419022948|ref|ZP_13570189.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC2A]
gi|419027822|ref|ZP_13575015.1| 23S rRNA methyltransferase [Escherichia coli DEC2C]
gi|419033881|ref|ZP_13580977.1| 23S rRNA methyltransferase [Escherichia coli DEC2D]
gi|419038630|ref|ZP_13585684.1| 23S rRNA methyltransferase [Escherichia coli DEC2E]
gi|312286571|gb|EFR14484.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|377847799|gb|EHU12796.1| 23S rRNA methyltransferase [Escherichia coli DEC1A]
gi|377849600|gb|EHU14569.1| 23S rRNA methyltransferase [Escherichia coli DEC1C]
gi|377852761|gb|EHU17675.1| 23S rRNA methyltransferase [Escherichia coli DEC1B]
gi|377861984|gb|EHU26798.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC1D]
gi|377865814|gb|EHU30604.1| 23S rRNA methyltransferase [Escherichia coli DEC1E]
gi|377867958|gb|EHU32707.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
DEC2A]
gi|377878109|gb|EHU42697.1| 23S rRNA methyltransferase [Escherichia coli DEC2B]
gi|377883058|gb|EHU47589.1| 23S rRNA methyltransferase [Escherichia coli DEC2D]
gi|377884307|gb|EHU48820.1| 23S rRNA methyltransferase [Escherichia coli DEC2C]
gi|377897515|gb|EHU61894.1| 23S rRNA methyltransferase [Escherichia coli DEC2E]
Length = 308
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + NW IPDG LCP VP R++YIH + DLL+ T N + DIG GANCIY
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAE-ASGTIQANASIL---DIGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 119 PLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ S + FN G++ EQ+D +CNPP
Sbjct: 162 ------------------QKESGAIFN----------------GIIHKNEQYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A GLN + GG +E+ C GGE AFI +IIE+S +
Sbjct: 188 FHDSATAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKIIEESKGFAKQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 248 MWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|386703991|ref|YP_006167838.1| hypothetical protein P12B_c0794 [Escherichia coli P12b]
gi|383102159|gb|AFG39668.1| hypothetical protein P12B_c0794 [Escherichia coli P12b]
Length = 316
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + SNP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|429122460|ref|ZP_19183039.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
sakazakii 680]
gi|426323062|emb|CCK13776.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
sakazakii 680]
Length = 309
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 160/356 (44%), Gaps = 77/356 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N++ DF L P+ FV S G P ID+ D A + L + LL H
Sbjct: 4 KPGLHPRNRHHSRY-DFDALTESCPALGAFVRPSPAGEPTIDFADPQAVKTLNQALLAHF 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG----FDIGTGAN 127
+G+ W IPDG LCP VP R++YIH + DLL+ NG + DIG GAN
Sbjct: 63 YGVREWDIPDGFLCPPVPGRADYIHHLADLLAEG-------NGGALPAQASVLDIGVGAN 115
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW F G+D +D A+ A + +NP ++ I +R+ + TP
Sbjct: 116 CIYPLIGQHEYGWRFTGTDTSDEAIRSASAIIDANPGLNRAIRLRR----QKTPGA---- 167
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ G++ E +D +C
Sbjct: 168 -------------------------------------------IFNGIIHKNESYDATLC 184
Query: 248 NPPFFESME--EAG-----------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF +S + EAG N + GG +E+ C GGE FIT++I +S
Sbjct: 185 NPPFHDSADAAEAGNARKRRNLGLAANSGLNFGGQQQELWCEGGEVGFITQMIAESKLFA 244
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ W+T++V + NL L L + G V E QGQ +AWSF+ A++
Sbjct: 245 RQVLWFTTLVSKGDNLPLLYRALEQAGAVKVVKKEMAQGQKQSRFIAWSFLDTAQR 300
>gi|425080645|ref|ZP_18483742.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|428933923|ref|ZP_19007461.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae JHCK1]
gi|405605780|gb|EKB78784.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|426304040|gb|EKV66194.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae JHCK1]
Length = 304
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 168/357 (47%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S +P + DIGTGA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAGDSGEVPKDATI------LDIGTGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
N IYPL+GA GW F GS++ A A+ + NP ++ I +R+
Sbjct: 115 NLIYPLIGAHEYGWRFTGSEINPQAFASAQAIINGNPGLTRQIRLRR------------- 161
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
Q ES Q+ +H GV+ E +D +
Sbjct: 162 ------QKES--------------------------QAIFH------GVIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S E A GL ++ GG +E+ C GGE AFI+++I +S A
Sbjct: 184 CNPPFHDSAESARAGGERKRRNLGLGAESGLNFGGQQQELWCEGGEVAFISQMIRESQAF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L +VG V E QGQ LAWSF+ A++
Sbjct: 244 ARQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFLAWSFMDDAKR 300
>gi|331651815|ref|ZP_08352834.1| putative methyltransferase YbiN [Escherichia coli M718]
gi|331050093|gb|EGI22151.1| putative methyltransferase YbiN [Escherichia coli M718]
Length = 308
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPVNA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|424513393|emb|CCO66015.1| predicted protein [Bathycoccus prasinos]
Length = 377
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 180/369 (48%), Gaps = 45/369 (12%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR-------IDWTDFN 59
+R+R+++ H + K + PDFA LA Y F ++ ID+T +
Sbjct: 24 KRKRDDQHHHHQRGK--KERPDFARLAGKYDYFARHAMRTKKKNKSHEMDKVFIDFTSWQ 81
Query: 60 ATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG 119
AT +L R LL NW IP G L P R NY W+E LL + + N V+G
Sbjct: 82 ATHDLCRALLEEIGVKNWSIPKGHLVPGFTQRRNYCEWVESLLEKDGVQIEEEN---VRG 138
Query: 120 FDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKS---------NPHISELI 169
D+GTGA+ I+ LL S W G+D+T+ A+E A +N + + +E +
Sbjct: 139 VDVGTGASAIFALLFTSRHPKWDMFGTDITEEAVESARRNCLAAGASERCCKDEETTEQV 198
Query: 170 EIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229
+ +N+ S S S S++D + SG + A
Sbjct: 199 VAAENNNTHSNCSSGRSRRWISIRDVAKKRSSG----------VTREEEEAEDAEEEEDQ 248
Query: 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
P+L + + E+ DF +CNPPFF +M E+ NP+T+ GGT +E GGE +F+ R+I +
Sbjct: 249 PILDLDLFEEERIDFTVCNPPFFNTMSESSQNPRTNFGGTTKENSYRGGESSFVRRMILE 308
Query: 290 S--VAL----------KQTFRWYTSMVGRKSNLKFLISKLRKVG-VTIVKTTEFVQGQTC 336
S VAL + RW+T+MVG K+ LK LR++ T ++ T FVQG+T
Sbjct: 309 SRQVALSLNSSKGEENQHRVRWFTTMVGAKATLKMAKKCLREMKETTKLRETAFVQGKTR 368
Query: 337 RWGLAWSFV 345
RWGLAWSF+
Sbjct: 369 RWGLAWSFL 377
>gi|419762490|ref|ZP_14288737.1| rRNA adenine N-6-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397744671|gb|EJK91882.1| rRNA adenine N-6-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 350
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 170/365 (46%), Gaps = 74/365 (20%)
Query: 2 GSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNAT 61
G K + ++P +HP+N++ + D L +P + ++ + G ID+ + A
Sbjct: 40 GCSKEIVMKAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAV 98
Query: 62 RELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVK 118
+ L + LL H + + W IPDG LCP VP R++YIH + DLL+ S +P +
Sbjct: 99 KALNKALLAHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAGDSGEVPKDATI----- 153
Query: 119 GFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
DIGTGAN IYPL+GA GW F GS++ A A+ + NP ++ I +R+
Sbjct: 154 -LDIGTGANLIYPLIGAHEYGWRFTGSEINPQAFASAQAIINGNPGLTRQIRLRR----- 207
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
Q ES Q+ +H GV+
Sbjct: 208 --------------QKES--------------------------QAIFH------GVIHK 221
Query: 239 GEQFDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITR 285
E +D +CNPPF +S E A GL ++ GG +E+ C GGE AFI++
Sbjct: 222 NETYDATLCNPPFHDSAESARAGGERKRRNLGLGAESGLNFGGQQQELWCEGGEVAFISQ 281
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+I +S A + +W+TS+V R NL L L +VG V E QGQ +AWSF+
Sbjct: 282 MIRESQAFARQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFM 341
Query: 346 PPARK 350
A++
Sbjct: 342 DDAKR 346
>gi|384172273|ref|YP_005553650.1| methyltransferase [Arcobacter sp. L]
gi|345471883|dbj|BAK73333.1| methyltransferase [Arcobacter sp. L]
Length = 313
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 164/350 (46%), Gaps = 75/350 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+H +N + N DF L S + FV ++ G ID+ + +A L + LL H +G
Sbjct: 6 TLHHRN-FHNNRYDFTTLIKSQDSLKEFVKPNKYGDLSIDFANPDAVIALNKALLSHFYG 64
Query: 75 L-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ NW IP G LCP +P R++YIH I DLL+ + IP G +KG D+G GANCIY
Sbjct: 65 IKNWEIPKGYLCPPIPGRADYIHHIADLLALSNNGKIPK----GKAIKGLDVGVGANCIY 120
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P++G S+ GW F+GSD+ ++E + SN + E I++ + +N
Sbjct: 121 PIIGVSVYGWQFLGSDIEKNSIESVLNIINSNEILKENIKVLQQEN-------------- 166
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
PS+ + V ++ E++DF +CNPP
Sbjct: 167 -------------------PSN------------------IFVNIINKDEKYDFTLCNPP 189
Query: 251 FFESMEEAGLNPKTSC---------------GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
F +S++EA K GG E+ C GGE FI +I++S+ +
Sbjct: 190 FHKSLDEALAGNKIKVQNLTKQKSTKSALNFGGKNNELWCEGGEIVFIKNMIKESLEFSK 249
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V +K NL F+ L+ VKT E GQ +AW+F+
Sbjct: 250 NCLWFTTLVSKKENLSFIYKALKDAKAVEVKTIEMAHGQKISRIVAWTFL 299
>gi|300993334|ref|ZP_07180350.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|300406627|gb|EFJ90165.1| conserved hypothetical protein [Escherichia coli MS 45-1]
Length = 308
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHNSATAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L +G V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDLGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|288936397|ref|YP_003440456.1| rRNA (adenine-N(6)-)-methyltransferase [Klebsiella variicola At-22]
gi|290510548|ref|ZP_06549918.1| ribosomal RNA large subunit methyltransferase F [Klebsiella sp.
1_1_55]
gi|288891106|gb|ADC59424.1| rRNA (adenine-N(6)-)-methyltransferase [Klebsiella variicola At-22]
gi|289777264|gb|EFD85262.1| ribosomal RNA large subunit methyltransferase F [Klebsiella sp.
1_1_55]
Length = 304
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 166/355 (46%), Gaps = 70/355 (19%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
H + + W IPDG LCP VP R++YIH + DLL+ + + + DIGTGAN
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAQD----SGEVPKQATILDIGTGANL 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+++ A A+ V NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSEISPEAFASAQAIVNGNPGLTRQIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
Q ES Q+ +H GV+ E +D +CN
Sbjct: 162 ----QKES--------------------------QAIFH------GVIHKNETYDATLCN 185
Query: 249 PPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S E A G + + GG +E+ C GGE AFI+++I +S A +
Sbjct: 186 PPFHDSAESARAGGERKRRNLGLGADSALNFGGQQQELWCEGGEVAFISQMIRESQAFAR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+W+TS+V R NL L L +VG V E QGQ +AWSF+ A++
Sbjct: 246 QVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR 300
>gi|398791317|ref|ZP_10552062.1| putative SAM-dependent methyltransferase [Pantoea sp. YR343]
gi|398215371|gb|EJN01934.1| putative SAM-dependent methyltransferase [Pantoea sp. YR343]
Length = 308
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 158/348 (45%), Gaps = 68/348 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
HP+N++ + DFA L + +P V + G +D+ D A L + LL + L
Sbjct: 10 FHPRNRH-QGRYDFAALTAAHPPLAVKVRPNGYGELSVDFADPEAVMLLNQALLKLFYNL 68
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
NW +P G L P VP R++Y+H + DLL+ + R+ D + DIG GANCIYPL+G
Sbjct: 69 NWQLPAGYLTPPVPGRADYVHALADLLAGDNGGVVPRDLDVM---DIGCGANCIYPLIGN 125
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ GW F G+D+T A+ A + V SNP + + +R+ ++ +
Sbjct: 126 AEYGWRFTGTDITSEAITVAGQIVASNPGLQRAVRLRRQKDASA---------------- 169
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+ GVV E + +CNPPF S
Sbjct: 170 -----------------------------------IFAGVVHKNEHYHAVLCNPPFHASA 194
Query: 256 EEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
EEA G N + GG E+ C GGER F+ ++I +SVA W+TS
Sbjct: 195 EEAATVGQRKTRNLGLGKNAPLNFGGHHNELWCDGGERKFVGQMIAESVAYSDHIIWFTS 254
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+V RK NL L +LR + V+ E QGQ +AW+F PPA +
Sbjct: 255 LVSRKENLPALRDQLRDLDAYEVRIIEMAQGQKQSRFIAWTFQPPATR 302
>gi|415812848|ref|ZP_11504943.1| hypothetical protein ECLT68_3315 [Escherichia coli LT-68]
gi|415854769|ref|ZP_11530355.1| hypothetical protein SF2457T_1298 [Shigella flexneri 2a str. 2457T]
gi|417700959|ref|ZP_12350092.1| hypothetical protein SFK218_1137 [Shigella flexneri K-218]
gi|417706422|ref|ZP_12355478.1| hypothetical protein SFVA6_1231 [Shigella flexneri VA-6]
gi|417721866|ref|ZP_12370707.1| hypothetical protein SFK304_0995 [Shigella flexneri K-304]
gi|417727202|ref|ZP_12375943.1| hypothetical protein SFK671_0879 [Shigella flexneri K-671]
gi|417732445|ref|ZP_12381114.1| hypothetical protein SF274771_0916 [Shigella flexneri 2747-71]
gi|417737662|ref|ZP_12386263.1| hypothetical protein SF434370_1001 [Shigella flexneri 4343-70]
gi|417742301|ref|ZP_12390851.1| 23S rRNA methyltransferase [Shigella flexneri 2930-71]
gi|417826870|ref|ZP_12473443.1| 23S rRNA methyltransferase [Shigella flexneri J1713]
gi|418254169|ref|ZP_12879066.1| 23S rRNA methyltransferase [Shigella flexneri 6603-63]
gi|419866247|ref|ZP_14388613.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O103:H25 str.
CVM9340]
gi|419925797|ref|ZP_14443625.1| putative SAM-dependent methyltransferase [Escherichia coli 541-15]
gi|420319309|ref|ZP_14821162.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
2850-71]
gi|420330074|ref|ZP_14831771.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
K-1770]
gi|420340422|ref|ZP_14841946.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
K-404]
gi|205829728|sp|Q0T6F4.2|RLMF_SHIF8 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829729|sp|Q83LU4.2|RLMF_SHIFL RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|313650292|gb|EFS14704.1| hypothetical protein SF2457T_1298 [Shigella flexneri 2a str. 2457T]
gi|323172278|gb|EFZ57916.1| hypothetical protein ECLT68_3315 [Escherichia coli LT-68]
gi|332759709|gb|EGJ90012.1| hypothetical protein SF434370_1001 [Shigella flexneri 4343-70]
gi|332760556|gb|EGJ90845.1| hypothetical protein SF274771_0916 [Shigella flexneri 2747-71]
gi|332763013|gb|EGJ93258.1| hypothetical protein SFK671_0879 [Shigella flexneri K-671]
gi|332767972|gb|EGJ98158.1| 23S rRNA methyltransferase [Shigella flexneri 2930-71]
gi|333006600|gb|EGK26099.1| hypothetical protein SFVA6_1231 [Shigella flexneri VA-6]
gi|333006994|gb|EGK26489.1| hypothetical protein SFK218_1137 [Shigella flexneri K-218]
gi|333020950|gb|EGK40208.1| hypothetical protein SFK304_0995 [Shigella flexneri K-304]
gi|335576638|gb|EGM62883.1| 23S rRNA methyltransferase [Shigella flexneri J1713]
gi|388335542|gb|EIL02103.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O103:H25 str.
CVM9340]
gi|388385519|gb|EIL47198.1| putative SAM-dependent methyltransferase [Escherichia coli 541-15]
gi|391253497|gb|EIQ12670.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
2850-71]
gi|391258120|gb|EIQ17226.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
K-1770]
gi|391272979|gb|EIQ31808.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
K-404]
gi|397900526|gb|EJL16885.1| 23S rRNA methyltransferase [Shigella flexneri 6603-63]
Length = 308
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVNFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|333901507|ref|YP_004475380.1| ribosomal RNA large subunit methyltransferase F [Pseudomonas fulva
12-X]
gi|333116772|gb|AEF23286.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas fulva
12-X]
Length = 330
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 162/351 (46%), Gaps = 71/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ + DF L P FV + G ID+ + A + R LL
Sbjct: 18 DKGQLHPRNRH-QGRYDFPALIKASPELAAFVIINPYGNQSIDFANPAAVKVFNRALLKQ 76
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP +P R++Y+H++ DLL+ T R G V+ DIG GANCIY
Sbjct: 77 FYGIKHWDIPADYLCPPIPGRADYLHYLADLLAGENGGETPR-GRCVRALDIGVGANCIY 135
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLGA GW F+G+D+ A+ A V++NP + E IE+R N
Sbjct: 136 PLLGACEYGWRFLGTDIAPEAIASATNIVQANPGMGEQIELRLQPN-------------- 181
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
SGH V G+++ E+F+ +CNPP
Sbjct: 182 ----------SGH---------------------------VFTGLLKPDERFELTLCNPP 204
Query: 251 FFESMEEAG------------LNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F S EA L+PK GG E+ C GGE AF+ R+I +S A
Sbjct: 205 FHASAGEAASGSKRKWRNLGKLDPKRKLPVLNFGGQAAELWCPGGEAAFVARLIGESAAH 264
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+++++ + NL + + L+KVG +T E QGQ +AW+F
Sbjct: 265 RDQVLWFSTLISKAGNLPGVYATLKKVGALETRTVEMSQGQKQSRFVAWTF 315
>gi|126663522|ref|ZP_01734519.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium
BAL38]
gi|126624470|gb|EAZ95161.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium
BAL38]
Length = 302
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 17 HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL- 75
HPKNK+ DF L + P FV + G ID+ + +A + L + LLLH +GL
Sbjct: 11 HPKNKH-HGKYDFKTLIAANPDLMSFVAVNEYGTETIDFANPDAVKMLNKALLLHFYGLK 69
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
NW IP G LCP +P R+ YIH + D+L T + K++ D+G GANCIYP++G
Sbjct: 70 NWDIPKGFLCPPIPGRAEYIHQVADILEDTY--GTIQTKHKIRILDVGIGANCIYPIIGV 127
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
S W FVGS++ A E A++N+ SN + E + +R + NS+
Sbjct: 128 SEYDWRFVGSEIDKQAFEAAQENINSNQKLKENVALR-LQNSKRN--------------- 171
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+ ++ ++FD ICNPPF S
Sbjct: 172 -----------------------------------IFKNIILPEDKFDMTICNPPFHSSK 196
Query: 256 EEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
EEA P + GG E+ C GGE FI+ +I +SV K +W+
Sbjct: 197 EEANKGTIRKNKNLGIEDSKKPTLNFGGVNNELWCEGGELTFISNMIYESVHFKSQCKWF 256
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S+V +K NLK L+S L+KV T + TE G L W+F+
Sbjct: 257 SSLVSKKDNLKPLLSHLKKVKAT-YQITEMKHGNKVSRILFWTFL 300
>gi|366160950|ref|ZP_09460812.1| 23S rRNA mA1618 methyltransferase [Escherichia sp. TW09308]
Length = 308
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 162/350 (46%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ + IP ++ DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEATGTIPASA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F G++ AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGTETNSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +S+ FN G++ EQ+D +CN
Sbjct: 162 --------------------QKENSAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNRDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGSVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|170723402|ref|YP_001751090.1| putative SAM-dependent methyltransferase [Pseudomonas putida W619]
gi|205829570|sp|B1JBB3.1|RLMF_PSEPW RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|169761405|gb|ACA74721.1| protein of unknown function DUF890 [Pseudomonas putida W619]
Length = 316
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 3 QKPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKA 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP +P R++YIH DLL+ + + G +V+ DIG GANCIY
Sbjct: 62 QYGIQHWDIPADYLCPPIPGRADYIHVAADLLAEDNAGEVPK-GAQVRALDIGVGANCIY 120
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG W F+GSD+ VAL A+ V++N +S+ I +R+ +N++
Sbjct: 121 PLLGHCDYRWRFLGSDIDPVALASAKAIVQAN-GLSKAIALRQQNNAKL----------- 168
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ + E+FD +CNPP
Sbjct: 169 ----------------------------------------ILGGLLEEDERFDLTLCNPP 188
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F S EEA P + GG E+ C GGE F+++++ +S+
Sbjct: 189 FHASREEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVSQLVGESLQY 248
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V + SNL + + L+K GV V+ E QGQ +AWSF
Sbjct: 249 AVQVLWFTSLVSKASNLPGIEAALKKAGVKAVRIVEMGQGQKQSRMVAWSF 299
>gi|423107491|ref|ZP_17095186.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5243]
gi|423113371|ref|ZP_17101062.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5245]
gi|376388516|gb|EHT01211.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5243]
gi|376388740|gb|EHT01433.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5245]
Length = 304
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 165/357 (46%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + F+ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPELQAFITLNPVGEQTIDFANPLAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S IP + DIG GA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLALDSGTIPANA------SILDIGVGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+GA GW F GS++ A A+ + NP ++ I +R+
Sbjct: 115 NCIYPLIGAHEYGWRFTGSEVNADAFASAQAIINGNPGLTRQIRLRR------------- 161
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
Q ++N +L G++ E +D +
Sbjct: 162 ------QKDANA--------------------------------ILTGIIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S A GL ++ + GG +E+ C GGE AFIT++IE+S
Sbjct: 184 CNPPFHDSAASAQAGGERKRRNLGLGEESVLNFGGQQQELWCEGGEVAFITQMIEESKPF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L VG V E QG +AW+F+ A++
Sbjct: 244 ARQVKWFTSLVSRGDNLPPLYRALTDVGAVKVVKKEMAQGNKQSRFIAWTFMDEAKR 300
>gi|24112175|ref|NP_706685.1| 23S rRNA mA1618 methyltransferase [Shigella flexneri 2a str. 301]
gi|30062292|ref|NP_836463.1| SAM-dependent methyltransferase [Shigella flexneri 2a str. 2457T]
gi|110804807|ref|YP_688327.1| SAM-dependent methyltransferase [Shigella flexneri 5 str. 8401]
gi|384542347|ref|YP_005726409.1| putative methyltransferase ybiN [Shigella flexneri 2002017]
gi|424837270|ref|ZP_18261907.1| putative SAM-dependent methyltransferase [Shigella flexneri 5a str.
M90T]
gi|24051014|gb|AAN42392.1| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30040537|gb|AAP16269.1| hypothetical protein S0800 [Shigella flexneri 2a str. 2457T]
gi|110614355|gb|ABF03022.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281600132|gb|ADA73116.1| putative methyltransferase ybiN [Shigella flexneri 2002017]
gi|383466322|gb|EID61343.1| putative SAM-dependent methyltransferase [Shigella flexneri 5a str.
M90T]
Length = 335
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVNFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|218704185|ref|YP_002411704.1| putative SAM-dependent methyltransferase [Escherichia coli UMN026]
gi|293404107|ref|ZP_06648101.1| SAM-dependent methyltransferase [Escherichia coli FVEC1412]
gi|298379888|ref|ZP_06989493.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FVEC1302]
gi|300898298|ref|ZP_07116648.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|331662164|ref|ZP_08363087.1| putative methyltransferase YbiN [Escherichia coli TA143]
gi|417585613|ref|ZP_12236389.1| hypothetical protein ECSTECC16502_1237 [Escherichia coli
STEC_C165-02]
gi|419936268|ref|ZP_14453286.1| putative SAM-dependent methyltransferase [Escherichia coli 576-1]
gi|422332380|ref|ZP_16413394.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
4_1_47FAA]
gi|432352763|ref|ZP_19596047.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE2]
gi|432400997|ref|ZP_19643751.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE26]
gi|432425053|ref|ZP_19667568.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE181]
gi|432459823|ref|ZP_19701980.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE204]
gi|432474913|ref|ZP_19716921.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE208]
gi|432488403|ref|ZP_19730289.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE213]
gi|432521495|ref|ZP_19758651.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE228]
gi|432536862|ref|ZP_19773779.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE235]
gi|432630423|ref|ZP_19866367.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE80]
gi|432640021|ref|ZP_19875861.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE83]
gi|432665090|ref|ZP_19900676.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE116]
gi|432769652|ref|ZP_20004005.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE50]
gi|432773995|ref|ZP_20008281.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE54]
gi|432838420|ref|ZP_20071909.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE140]
gi|432885217|ref|ZP_20099812.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE158]
gi|432911160|ref|ZP_20117641.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE190]
gi|432960369|ref|ZP_20150500.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE202]
gi|433017777|ref|ZP_20206038.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE105]
gi|433052178|ref|ZP_20239404.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE122]
gi|433062048|ref|ZP_20249005.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE125]
gi|433067054|ref|ZP_20253880.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE128]
gi|433157787|ref|ZP_20342652.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE177]
gi|433177339|ref|ZP_20361789.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE82]
gi|433202303|ref|ZP_20386101.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE95]
gi|254807085|sp|B7NAA7.1|RLMF_ECOLU RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|218431282|emb|CAR12160.1| putative AdoMet-dependent methyltransferase [Escherichia coli
UMN026]
gi|291428693|gb|EFF01718.1| SAM-dependent methyltransferase [Escherichia coli FVEC1412]
gi|298279586|gb|EFI21094.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FVEC1302]
gi|300358022|gb|EFJ73892.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|331060586|gb|EGI32550.1| putative methyltransferase YbiN [Escherichia coli TA143]
gi|345340262|gb|EGW72681.1| hypothetical protein ECSTECC16502_1237 [Escherichia coli
STEC_C165-02]
gi|373246691|gb|EHP66143.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
4_1_47FAA]
gi|388401607|gb|EIL62243.1| putative SAM-dependent methyltransferase [Escherichia coli 576-1]
gi|430877691|gb|ELC01125.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE2]
gi|430927595|gb|ELC48158.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE26]
gi|430958287|gb|ELC76881.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE181]
gi|430991106|gb|ELD07522.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE204]
gi|431008421|gb|ELD23222.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE208]
gi|431023286|gb|ELD36483.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE213]
gi|431044559|gb|ELD54831.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE228]
gi|431072439|gb|ELD80190.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE235]
gi|431173458|gb|ELE73534.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE80]
gi|431184537|gb|ELE84294.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE83]
gi|431203495|gb|ELF02152.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE116]
gi|431317734|gb|ELG05510.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE50]
gi|431319993|gb|ELG07645.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE54]
gi|431390886|gb|ELG74534.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE140]
gi|431419200|gb|ELH01558.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE158]
gi|431443876|gb|ELH24901.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE190]
gi|431478056|gb|ELH57815.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE202]
gi|431536149|gb|ELI12480.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE105]
gi|431574954|gb|ELI47711.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE122]
gi|431586964|gb|ELI58346.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE125]
gi|431589995|gb|ELI61109.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE128]
gi|431681163|gb|ELJ46969.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE177]
gi|431709248|gb|ELJ73718.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE82]
gi|431725221|gb|ELJ89077.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
KTE95]
Length = 308
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ + IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEATGSIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDVLNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|320035519|gb|EFW17460.1| hypothetical protein CPSG_05903 [Coccidioides posadasii str.
Silveira]
Length = 432
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 179/359 (49%), Gaps = 76/359 (21%)
Query: 18 PKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNW 77
P+N Y ++ DF LA P F F+ + ++D+ D A R+LT+ LL D LN
Sbjct: 4 PRNIYRQDV-DFRSLALEDPDFAKFLKVN----GQLDFNDPGAVRQLTKSLLRRDFKLNV 58
Query: 78 WIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNG----DKVKGFDIGTGANCIYPLL 133
+ D +LCP VPNR NY+ W++DL+ + R G +V G DIGTGA+CIYPLL
Sbjct: 59 ELSDDRLCPPVPNRFNYVLWLQDLIDTT--NDDYRGGYDPEREVVGLDIGTGASCIYPLL 116
Query: 134 G-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
A W FV +D+ D ++A++NV K +N +S +
Sbjct: 117 ACAQRPKWMFVATDINDKNFQYAQENV-------------KRNNLQSRIRV--------- 154
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+++ P + +G E+ F +CNPPF+
Sbjct: 155 -----------------------------VKTTAEDPLIALGDKVPFERLQFTMCNPPFY 185
Query: 253 ESMEE----AGLN---PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
ES EE A L P ++C G P EMV +GGE +F+ RII++S+ L+ +WYTSM+G
Sbjct: 186 ESEEEMLASANLKHRPPNSACTGAPVEMVTAGGEESFVQRIIDESLKLRNKVQWYTSMLG 245
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVAEKKNLS 363
+ S++ LI KL + G TEFVQG +T RW +AWS+ + + P + +N+S
Sbjct: 246 KLSSVTKLIEKLLESGNQNWAVTEFVQGSKTRRWAIAWSW-----RDLRPTMGVARNIS 299
>gi|416304688|ref|ZP_11653985.1| Ribosomal RNA large subunit methyltransferase F [Shigella flexneri
CDC 796-83]
gi|320183298|gb|EFW58153.1| Ribosomal RNA large subunit methyltransferase F [Shigella flexneri
CDC 796-83]
Length = 308
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YI+ + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIYHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|209808856|ref|YP_002264394.1| putative SAM-dependent methyltransferase [Aliivibrio salmonicida
LFI1238]
gi|208010418|emb|CAQ80768.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 332
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 167/361 (46%), Gaps = 85/361 (23%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ ++HP+NK++ + DF L + +P + FV ++ G I+++D A + L + LL H
Sbjct: 22 KKSMHPRNKHNASY-DFPALIATFPELKAFVETNQYGNESINFSDPLAVKALNKALLAHF 80
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + +W IP+G LCP +P R++YIH I DLL+ IPT G VKG DIG GANC
Sbjct: 81 YDVPFWDIPEGYLCPPIPGRADYIHNIADLLAITNDGEIPT----GKSVKGLDIGVGANC 136
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YP+LG S W+FVGSD AL+ A +NP + + IE R N E
Sbjct: 137 VYPILGHSEYKWNFVGSDTDPQALKMASFIANNNPSLKKSIECRLQANDEH--------- 187
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G+++ ++F F +CN
Sbjct: 188 ------------------------------------------IFKGIIKPQDEFAFTMCN 205
Query: 249 PPFFESMEEAGLN-------------------------PKTSCGGTPEEMVCSGGERAFI 283
PPF S EEA K + GG E+ GGE AFI
Sbjct: 206 PPFHASEEEATAGSERKQQNLATSKSKKGHAYNELKGVKKLNFGGQNAELWYEGGEIAFI 265
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
T++ ++S +W+T+++ +K N+ L +L ++GV +KT + QG +AW+
Sbjct: 266 TKMAQESCEFALQVQWFTTLISKKENVDTLYQELTRLGVKTIKTIDMAQGHKISRFVAWT 325
Query: 344 F 344
F
Sbjct: 326 F 326
>gi|170683739|ref|YP_001742911.1| putative SAM-dependent methyltransferase [Escherichia coli SMS-3-5]
gi|205829554|sp|B1LM99.1|RLMF_ECOSM RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|170521457|gb|ACB19635.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
Length = 308
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 161/351 (45%), Gaps = 76/351 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGAN 127
+ + NW IPDG LCP VP R++YIH + DLL+ +I+ S DIG GAN
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEATGSILANASI-------LDIGVGAN 115
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 116 CIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR-------------- 161
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ S + FN G++ EQ+D +C
Sbjct: 162 ---------------------QKESGAIFN----------------GIIHKNEQYDATLC 184
Query: 248 NPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF +S A GLN + GG +E+ C GGE AFI ++IE+S
Sbjct: 185 NPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFA 244
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W+TS+V R NL L L +VG V E QGQ +AW+F+
Sbjct: 245 KQVMWFTSLVSRGENLPPLYRVLTEVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|386033969|ref|YP_005953882.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|424829763|ref|ZP_18254491.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339761097|gb|AEJ97317.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|414707188|emb|CCN28892.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 304
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 168/357 (47%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S +P + DIGTGA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAGDSGEVPKDATI------LDIGTGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
N IYPL+GA GW F GS++ A A+ + NP ++ I +R+
Sbjct: 115 NLIYPLIGAHEYGWRFTGSEINPQAFASAQAIINGNPGLTRQIRLRR------------- 161
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
Q ES Q+ +H GV+ E +D +
Sbjct: 162 ------QKES--------------------------QAIFH------GVIHKNEAYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S E A GL ++ GG +E+ C GGE AFI+++I +S A
Sbjct: 184 CNPPFHDSAESARAGGERKRRNLGLGAESGLNFGGQQQELWCEGGEVAFISQMIRESQAF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L +VG V E QGQ +AWSF+ A++
Sbjct: 244 ARQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR 300
>gi|398798541|ref|ZP_10557840.1| putative SAM-dependent methyltransferase [Pantoea sp. GM01]
gi|398100448|gb|EJL90687.1| putative SAM-dependent methyltransferase [Pantoea sp. GM01]
Length = 308
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 161/348 (46%), Gaps = 68/348 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
HP+N++ + DFA L + +P V + G +D+ D A L + LL + L
Sbjct: 10 FHPRNRH-QGRYDFAALTAAHPPLAVKVRPNGYGELSVDFADPEAVMLLNQALLKLFYNL 68
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
NW +P G L P VP R++Y+H + DLL+S+ R+ D + DIG GANCIYPL+G
Sbjct: 69 NWQLPAGYLTPPVPGRADYVHALADLLASDNEGVIPRDLDVM---DIGCGANCIYPLIGN 125
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ GW F G+D+T A+ A + V SNP + + +R+ ++ +
Sbjct: 126 AEYGWRFTGTDITAEAITAAGQIVASNPGLQRGVRLRRQKDAAA---------------- 169
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+ GVV E++ +CNPPF S
Sbjct: 170 -----------------------------------IFSGVVHKNERYHAVLCNPPFHSSA 194
Query: 256 EEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
+EA G N + GG E+ C GGER F+ ++I++SVA W+TS
Sbjct: 195 QEAATVGQRKTRNLGLGKNAPLNFGGHHSELWCDGGERKFVGQMIDESVAHSDNIVWFTS 254
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+V RK NL L +LR + V+ E QGQ +AW+F PPA +
Sbjct: 255 LVSRKENLPALRDQLRDLDAYEVRIIEMAQGQKQSRFIAWTFQPPATR 302
>gi|420290994|ref|ZP_14793157.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW11039]
gi|390801025|gb|EIO68091.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW11039]
Length = 308
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPK--TSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSECKRRNLGLNKDDVLNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|425090707|ref|ZP_18493792.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|405613685|gb|EKB86414.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
Length = 304
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 168/357 (47%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S +P + DIGTGA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAGDSGEVPKDATI------LDIGTGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
N IYPL+GA GW F GS++ A A+ + NP ++ I +R+
Sbjct: 115 NLIYPLIGAHEYGWRFTGSEINPQAFASAQAIINGNPGLTRQIRLRR------------- 161
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
Q ES Q+ +H GV+ E +D +
Sbjct: 162 ------QKES--------------------------QAIFH------GVIHKNEAYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S E A GL ++ GG +E+ C GGE AFI+++I +S A
Sbjct: 184 CNPPFHDSAESARAGGERKRRNLGLGAESGLNFGGQQQELWCEGGEVAFISQMIRESQAF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L +VG V E QGQ +AWSF+ A++
Sbjct: 244 ARQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR 300
>gi|417130759|ref|ZP_11976030.1| rRNA adenine N-6-methyltransferase [Escherichia coli 5.0588]
gi|386153867|gb|EIH05148.1| rRNA adenine N-6-methyltransferase [Escherichia coli 5.0588]
Length = 308
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF + A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDFAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|410639409|ref|ZP_11349957.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola
chathamensis S18K6]
gi|410141000|dbj|GAC08144.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola
chathamensis S18K6]
Length = 312
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 162/356 (45%), Gaps = 80/356 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + P L S YP+ + ++ G+ ID+ + ++ + L LL+H +G+
Sbjct: 1 MHPRNLHHSGYPMVKLCQS-YPALRAHLISAKSGQQSIDFANADSVKALNAALLIHYYGM 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+ W IP G LCP VP R++YIH I DLLS+ T G K+ G D+G GAN IYP++G
Sbjct: 60 SMWDIPAGYLCPPVPGRADYIHGIADLLSAENNGKTP-TGSKINGLDVGVGANAIYPIIG 118
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW FVGSD+ DVAL A + +N + L+ +RK + ++
Sbjct: 119 SHTYGWRFVGSDIDDVALSCANTLIDNNSRLKPLLAVRKQHSKDN--------------- 163
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G+++ E F F +CNPPF +S
Sbjct: 164 ------------------------------------IFAGIIQPDEHFTFSLCNPPFHKS 187
Query: 255 MEEA---------GL-----------------NPKTSCGGTPEEMVCSGGERAFITRIIE 288
+A GL K + G E+ C GGE AFI R+I
Sbjct: 188 ARDAATGSQRKMSGLERSKQKLSRKGKTSAAQGSKLNFAGQNNELWCEGGELAFIQRMIS 247
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
SV ++Q W+T +V + ++LK + + ++ VG + QGQ +AW+F
Sbjct: 248 QSVDVQQQVDWFTCLVSKSAHLKAIETSVKYVGAKKFIKVDMGQGQKISRFVAWTF 303
>gi|416793141|ref|ZP_11882302.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H- str.
493-89]
gi|416804406|ref|ZP_11887161.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H- str. H
2687]
gi|419073959|ref|ZP_13619527.1| 23S rRNA methyltransferase [Escherichia coli DEC3F]
gi|420279188|ref|ZP_14781453.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW06591]
gi|425265578|ref|ZP_18657479.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
5412]
gi|320642795|gb|EFX11996.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H- str.
493-89]
gi|320648251|gb|EFX16906.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O157:H- str. H
2687]
gi|377930935|gb|EHU94805.1| 23S rRNA methyltransferase [Escherichia coli DEC3F]
gi|390784898|gb|EIO52454.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TW06591]
gi|408190176|gb|EKI15847.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
5412]
Length = 308
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GG+ FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGDVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|156934698|ref|YP_001438614.1| putative SAM-dependent methyltransferase [Cronobacter sakazakii
ATCC BAA-894]
gi|205829557|sp|A7MEZ1.1|RLMF_ENTS8 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|156532952|gb|ABU77778.1| hypothetical protein ESA_02533 [Cronobacter sakazakii ATCC BAA-894]
Length = 309
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 160/356 (44%), Gaps = 77/356 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N++ DF L P+ FV S G P ID+ D A + L + LL H
Sbjct: 4 KPGLHPRNRHHSRY-DFDALTESCPALGAFVRPSPAGEPTIDFADPQAVKTLNQALLAHF 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG----FDIGTGAN 127
+G+ W IPDG LCP VP R++YIH + DLL+ NG + DIG GAN
Sbjct: 63 YGVREWDIPDGFLCPPVPGRADYIHHLADLLAEG-------NGGALPAQASVLDIGVGAN 115
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW F G+D +D A+ A + +NP ++ I +R+
Sbjct: 116 CIYPLIGQHEYGWRFTGTDTSDEAIRSASAIIDANPGLNRAIRLRR-------------- 161
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ S + FN G++ E +D +C
Sbjct: 162 ---------------------QKSPGAIFN----------------GIIHKNESYDATLC 184
Query: 248 NPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF +S + A GL + GG +E+ C GGE FIT++I +S
Sbjct: 185 NPPFHDSADAAEAGNARKRRNLGLAADSGLNFGGQQQELWCEGGEVGFITQMIAESKLFA 244
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ W+T++V + NL L L + G V E QGQ +AWSF+ A++
Sbjct: 245 RQVLWFTTLVSKGDNLPLLYRALEQAGAVKVVKKEMAQGQKQSRFIAWSFLDTAQR 300
>gi|417711422|ref|ZP_12360424.1| hypothetical protein SFK272_1163 [Shigella flexneri K-272]
gi|417716245|ref|ZP_12365177.1| hypothetical protein SFK227_0979 [Shigella flexneri K-227]
gi|333009536|gb|EGK28988.1| hypothetical protein SFK272_1163 [Shigella flexneri K-272]
gi|333020465|gb|EGK39728.1| hypothetical protein SFK227_0979 [Shigella flexneri K-227]
Length = 308
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFSGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVNFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|209775828|gb|ACI86226.1| hypothetical protein ECs0885 [Escherichia coli]
Length = 335
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P + F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GG+ FI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGDVTFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|215485894|ref|YP_002328325.1| SAM-dependent methyltransferase [Escherichia coli O127:H6 str.
E2348/69]
gi|254807078|sp|B7UM03.1|RLMF_ECO27 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|215263966|emb|CAS08307.1| predicted SAM-dependent methyltransferase [Escherichia coli O127:H6
str. E2348/69]
Length = 308
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + NW IPDG LCP VP R++YIH + DLL+ T N + DIG GANCIY
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAE-ASGTIQANASIL---DIGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 119 PLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ S + FN G++ EQ+D +CNPP
Sbjct: 162 ------------------QKESGAIFN----------------GIIHKNEQYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 188 FHDSATAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAKQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 248 MWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|417790110|ref|ZP_12437695.1| 23S rRNA mA1618 methyltransferase [Cronobacter sakazakii E899]
gi|449308916|ref|YP_007441272.1| 23S rRNA mA1618 methyltransferase [Cronobacter sakazakii SP291]
gi|333955793|gb|EGL73511.1| 23S rRNA mA1618 methyltransferase [Cronobacter sakazakii E899]
gi|449098949|gb|AGE86983.1| 23S rRNA mA1618 methyltransferase [Cronobacter sakazakii SP291]
Length = 309
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 159/356 (44%), Gaps = 77/356 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N++ DF L P+ FV S G P ID+ D A + L + LL H
Sbjct: 4 KPGLHPRNRHHSRY-DFDALTESCPALGAFVRPSPTGEPTIDFADPQAVKTLNQALLAHF 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG----FDIGTGAN 127
+G+ W IPDG LCP VP R++YIH + DLL+ NG + DIG GAN
Sbjct: 63 YGVREWDIPDGFLCPPVPGRADYIHHLADLLAEG-------NGGALPAQASVLDIGVGAN 115
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW F G+D +D A+ A + +NP ++ I +R+ + TP
Sbjct: 116 CIYPLIGQHEYGWRFTGTDTSDEAIRSASAIIDANPGLNRAIRLRR----QKTPGA---- 167
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ G++ E +D +C
Sbjct: 168 -------------------------------------------IFNGIIHKNESYDATLC 184
Query: 248 NPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF +S + A GL + GG +E+ C GGE FIT++I +S
Sbjct: 185 NPPFHDSADAAEAGNARKRRNLGLAASSGLNFGGQQQELWCEGGEVGFITQMIAESKLFA 244
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ W+T++V + NL L L + G V E QGQ +AWSF+ A++
Sbjct: 245 RQVLWFTTLVSKGDNLPLLYRALEQAGAVKVVKKEMAQGQKQSRFIAWSFLDTAQR 300
>gi|261345852|ref|ZP_05973496.1| putative methyltransferase YbiN [Providencia rustigianii DSM 4541]
gi|282566342|gb|EFB71877.1| putative methyltransferase YbiN [Providencia rustigianii DSM 4541]
Length = 336
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 174/358 (48%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ EPFV + G +D+ D A +
Sbjct: 17 EKKKTFPQQKSGLHPRNRHRSRY-DFPALIASCPALEPFVKPNAWGDISVDFADPAAVKM 75
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP G LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 76 LNRALLQHFYGIEHWDIPAGYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKSVAILDV 134
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G + GW F GS++ V++ A+ V+ NP + + +R
Sbjct: 135 GVGANCIYPIIGLNEYGWRFTGSEIDPVSINTAKMIVEMNPTLRNSVRLR---------- 184
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + ++G ++GV E+F
Sbjct: 185 ---------LQKQPEFILNG-----------------------------IIGV---AEKF 203
Query: 243 DFCICNPPFFESMEEAGLN----------------PKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA + P + GG +E+ C GGE AF+ ++
Sbjct: 204 DATLCNPPFHSSEQEAQASTRRKLHKLGKGEVADTPVQNFGGKSKELWCEGGEEAFVRKM 263
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+E+SV+L Q W+TS++ + + L + L+ VG V+T E QGQ +AW+F
Sbjct: 264 VEESVSLAQNCLWFTSLISKNTTLPSIYHALKLVGAAEVRTIEMAQGQKISRFVAWTF 321
>gi|152969393|ref|YP_001334502.1| putative SAM-dependent methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|330010077|ref|ZP_08306676.1| rRNA adenine N-6-methyltransferase [Klebsiella sp. MS 92-3]
gi|365139160|ref|ZP_09345670.1| ribosomal RNA large subunit methyltransferase F [Klebsiella sp.
4_1_44FAA]
gi|402781651|ref|YP_006637197.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419974717|ref|ZP_14490134.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419977799|ref|ZP_14493097.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987065|ref|ZP_14502190.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991480|ref|ZP_14506445.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997931|ref|ZP_14512723.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003813|ref|ZP_14518456.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420006911|ref|ZP_14521407.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420012533|ref|ZP_14526846.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420020784|ref|ZP_14534969.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024059|ref|ZP_14538073.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420031048|ref|ZP_14544871.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420038785|ref|ZP_14552428.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420041889|ref|ZP_14555384.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420046983|ref|ZP_14560301.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056129|ref|ZP_14569289.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061465|ref|ZP_14574453.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420064151|ref|ZP_14576961.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420069519|ref|ZP_14582174.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078150|ref|ZP_14590610.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084527|ref|ZP_14596783.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421909367|ref|ZP_16339185.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421918251|ref|ZP_16347783.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424934324|ref|ZP_18352696.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425077520|ref|ZP_18480623.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425088153|ref|ZP_18491246.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|428151530|ref|ZP_18999246.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428940160|ref|ZP_19013252.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae VA360]
gi|449052721|ref|ZP_21732352.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae hvKP1]
gi|205829562|sp|A6T6Q1.1|RLMF_KLEP7 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|150954242|gb|ABR76272.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|328534628|gb|EGF61202.1| rRNA adenine N-6-methyltransferase [Klebsiella sp. MS 92-3]
gi|363654519|gb|EHL93417.1| ribosomal RNA large subunit methyltransferase F [Klebsiella sp.
4_1_44FAA]
gi|397345134|gb|EJJ38261.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397345984|gb|EJJ39103.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397353339|gb|EJJ46413.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397361548|gb|EJJ54209.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363741|gb|EJJ56378.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397368256|gb|EJJ60863.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397381409|gb|EJJ73580.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397385758|gb|EJJ77853.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397387455|gb|EJJ79480.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397399442|gb|EJJ91094.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397400788|gb|EJJ92426.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403888|gb|EJJ95427.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397417448|gb|EJK08613.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397417742|gb|EJK08905.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397420959|gb|EJK12000.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397430620|gb|EJK21309.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397433760|gb|EJK24403.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397442767|gb|EJK33109.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397445160|gb|EJK35411.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450139|gb|EJK40253.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402542527|gb|AFQ66676.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405593229|gb|EKB66681.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405602285|gb|EKB75427.1| ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|407808511|gb|EKF79762.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410116755|emb|CCM81810.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410119459|emb|CCM90408.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426302761|gb|EKV64952.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae VA360]
gi|427538513|emb|CCM95384.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448875856|gb|EMB10861.1| 23S rRNA mA1618 methyltransferase [Klebsiella pneumoniae hvKP1]
Length = 304
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 168/357 (47%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S +P + DIGTGA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAGDSGEVPKDATI------LDIGTGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
N IYPL+GA GW F GS++ A A+ + NP ++ I +R+
Sbjct: 115 NLIYPLIGAHEYGWRFTGSEINPQAFASAQAIINGNPGLTRQIRLRR------------- 161
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
Q ES Q+ +H GV+ E +D +
Sbjct: 162 ------QKES--------------------------QAIFH------GVIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S E A GL ++ GG +E+ C GGE AFI+++I +S A
Sbjct: 184 CNPPFHDSAESARAGGERKRRNLGLGAESGLNFGGQQQELWCEGGEVAFISQMIRESQAF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L +VG V E QGQ +AWSF+ A++
Sbjct: 244 ARQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR 300
>gi|383450206|ref|YP_005356927.1| Ribosomal RNA large subunit methyltransferase F [Flavobacterium
indicum GPTSA100-9]
gi|380501828|emb|CCG52870.1| Ribosomal RNA large subunit methyltransferase F [Flavobacterium
indicum GPTSA100-9]
Length = 294
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 164/349 (46%), Gaps = 77/349 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+NK++ + DF L +YP + FVF + G +D+ + A R L + +L D+
Sbjct: 4 TLHPRNKHNSSY-DFQKLIEVYPELKSFVFVNSYGNESVDFANPEAVRALNKAILKQDYQ 62
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFDIGTGANCIY 130
+N + +P L P +P R++YIH++ DLL+ I +PT G +K DIGTGANCIY
Sbjct: 63 INHYELPKTNLVPPIPGRADYIHYVADLLAKGINGTLPT----GSGIKILDIGTGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P++G GW+FVG+++ A AEK + SN + + I IR DN +
Sbjct: 119 PIIGHQTYGWTFVGTEIDKPAKITAEKIIHSN-ELQKAITIRFQDNKRN----------- 166
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L ++++ E+FD ICNPP
Sbjct: 167 ----------------------------------------ILKNIIQENEKFDCIICNPP 186
Query: 251 FFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
F +S E A P + GG E+ C GGE+AFIT I +S K
Sbjct: 187 FHDSREAATQGTKRKLKNLGQAVEEKPVLNFGGQNNELWCEGGEKAFITNFIYESKHFKN 246
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+W+T++V +K +LK L+K+ +T E QG LAW F
Sbjct: 247 QIKWFTTLVSKKDHLKEFFRILKKLDAKF-ETIEMHQGNKITRILAWQF 294
>gi|440230102|ref|YP_007343895.1| putative SAM-dependent methyltransferase [Serratia marcescens
FGI94]
gi|440051807|gb|AGB81710.1| putative SAM-dependent methyltransferase [Serratia marcescens
FGI94]
Length = 321
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 165/358 (46%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ PFV ++ G ID+ D A +
Sbjct: 2 QKKKTFPQQKNGLHPRNRHRSRY-DFPQLIASCPALAPFVAPNQWGDLSIDFADPAAVKM 60
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP G LCP +P R++Y+H + DLL++ R G V DI
Sbjct: 61 LNRALLQHFYGIEHWDIPAGYLCPPIPGRADYLHHLADLLAAGNGGAIPR-GKGVAILDI 119
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ AL+ A+ V NP + + +R
Sbjct: 120 GVGANCIYPIVGVREYGWRFTGSEVESGALQSAKMIVAMNPSLKNSVRLR---------- 169
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
++ +P+ + G++ E+F
Sbjct: 170 -----------------------QQKQPTR------------------IFDGIIGPAERF 188
Query: 243 DFCICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S EEA P + GG E+ C GGE AF+ +
Sbjct: 189 DATLCNPPFHASAEEARASTRRKLHKLGKGELAAQPVQNFGGKNNELWCDGGEEAFVCAM 248
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ +SV+ Q W+TS++ + S L + LR+ G V+T E QGQ +AW+F
Sbjct: 249 VAESVSKAQNCLWFTSLISKSSTLPAVYQALRQAGAAEVRTVEMAQGQKISRFVAWTF 306
>gi|387889897|ref|YP_006320195.1| putative SAM-dependent methyltransferase [Escherichia blattae DSM
4481]
gi|414592434|ref|ZP_11442084.1| 23S rRNA methyltransferase RlmF [Escherichia blattae NBRC 105725]
gi|386924730|gb|AFJ47684.1| putative SAM-dependent methyltransferase [Escherichia blattae DSM
4481]
gi|403196503|dbj|GAB79736.1| 23S rRNA methyltransferase RlmF [Escherichia blattae NBRC 105725]
Length = 313
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 168/350 (48%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
+P +HP+N++ + DF L P+ PF+ + G ID+ D A + L + LL H
Sbjct: 7 RKPGLHPRNRHHQRY-DFTALCQDCPALVPFLRTAPGGDKTIDFADPEAVKCLNQALLAH 65
Query: 72 DHGLN-WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNG---DKVKGFDIGTGAN 127
+ + W IPDG LCP VP R++YIH + DLL+ + RNG + DIGTGAN
Sbjct: 66 FYQVREWAIPDGFLCPPVPGRADYIHHLADLLAEH------RNGVPPRQASVLDIGTGAN 119
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPL+G GW F GS++ + AL+ A + + +NP +S+ I +R+
Sbjct: 120 LIYPLVGNCEYGWRFTGSEINEAALKNASRIISANPGLSKHIRLRR-------------- 165
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ SS+ F G++ E +D +C
Sbjct: 166 ---------------------QKDSSAFFK----------------GIIHSAECYDATLC 188
Query: 248 NPPFFESMEEA-----------GLNPKT-SCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
NPPF +S + A G+ ++ + GG +E+ C GGE AFI +I +SVA ++
Sbjct: 189 NPPFHDSADTARAGSERKRRNLGVKSESLNFGGQQQELWCPGGEVAFIKGMIAESVAFRR 248
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L++ GV V E QGQ LAWSF+
Sbjct: 249 QVLWFTTLVSRGDNLPVLYRALQEAGVEKVVKLEMAQGQKQSRILAWSFM 298
>gi|332307102|ref|YP_004434953.1| rRNA (adenine-N(6)-)-methyltransferase [Glaciecola sp. 4H-3-7+YE-5]
gi|332174431|gb|AEE23685.1| rRNA (adenine-N(6)-)-methyltransferase [Glaciecola sp. 4H-3-7+YE-5]
Length = 312
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 162/356 (45%), Gaps = 80/356 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + P A L YP+ + ++ G+ ID+ + ++ + L LL+H +G+
Sbjct: 1 MHPRNLHHSGYP-MAKLCQSYPALRAHLISAKSGQQSIDFANPDSVKALNAALLIHYYGM 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+ W IP G LCP VP R++YIH I DLLS+ T G K+ G D+G GAN IYP++G
Sbjct: 60 SMWDIPAGYLCPPVPGRADYIHGIADLLSAENNGKTP-TGSKITGLDVGVGANAIYPIIG 118
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW FVGSD+ DVAL A + +N + L+ +RK + ++
Sbjct: 119 SQTYGWRFVGSDIDDVALSCANTLIDNNSRLKPLLAVRKQHSKDN--------------- 163
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G+++ E F F +CNPPF +S
Sbjct: 164 ------------------------------------IFAGIIQPDEHFTFSLCNPPFHKS 187
Query: 255 MEEA---------GL-----------------NPKTSCGGTPEEMVCSGGERAFITRIIE 288
+A GL K + G E+ C GGE AFI R+I
Sbjct: 188 ARDAATGSQRKMSGLERSKQRHSRKGKTSAAQGSKLNFAGQNNELWCEGGELAFIQRMIS 247
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
SV ++Q W+T +V + ++LK + + ++ VG + QGQ +AW+F
Sbjct: 248 QSVDVQQQVDWFTCLVSKSAHLKAIETSVKYVGAKKFIKVDMGQGQKISRFVAWTF 303
>gi|333906653|ref|YP_004480239.1| ribosomal RNA large subunit methyltransferase F [Marinomonas
posidonica IVIA-Po-181]
gi|333476659|gb|AEF53320.1| Ribosomal RNA large subunit methyltransferase F [Marinomonas
posidonica IVIA-Po-181]
Length = 332
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 171/347 (49%), Gaps = 38/347 (10%)
Query: 3 SKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATR 62
SK +R + +H +N + DFALLA P ++ ++ G ID+ + +A +
Sbjct: 5 SKHTNGKRSNKLELHSRNPHRARY-DFALLADSCPELSHYIQLNKYGNESIDFANPDAVK 63
Query: 63 ELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVK 118
L R LL H +G+ +W IP G LCP +P R++YIH++ DLL+++ +IP G VK
Sbjct: 64 TLNRALLNHFYGVAFWDIPTGFLCPPIPGRADYIHYLADLLAASHEGVIP----RGKNVK 119
Query: 119 GFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
D+G GANC+YP++G GW FVGSD+ +A+ +KSNP + + +R
Sbjct: 120 VLDVGVGANCVYPIVGHQEYGWQFVGSDVNPIAIATCSTIIKSNPCLKNAVSVR------ 173
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
Q++ +D D + P +S + +Q + G + R
Sbjct: 174 -----QQASEKAIFKDIWQADERFDLTLCNPPFHTSESAMLEESQRKWRGVKGTSNMARK 228
Query: 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
N P ++ LN GGT E+ C GGE FI R++++S+A +
Sbjct: 229 ---------NAP-----QKTSLN----FGGTAPELWCDGGEAGFIIRMVKESIAYRDQCF 270
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R+SNL + L+ VG VK E QGQ +AWSF+
Sbjct: 271 WFTSLVARQSNLDTIQKALKDVGARQVKVVEMAQGQKISRFVAWSFL 317
>gi|82776114|ref|YP_402461.1| SAM-dependent methyltransferase [Shigella dysenteriae Sd197]
gi|81240262|gb|ABB60972.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 335
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 31 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 89
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R+++IH + DLL+ S IP + DIG GANC
Sbjct: 90 FYAVANWDIPDGFLCPPVPGRADHIHHLADLLAEASGTIPANA------SILDIGVGANC 143
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 144 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 188
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 189 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 212
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 213 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 272
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 273 QMMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 322
>gi|409097312|ref|ZP_11217336.1| 23S rRNA mA1618 methyltransferase [Pedobacter agri PB92]
Length = 331
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 173/359 (48%), Gaps = 70/359 (19%)
Query: 3 SKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATR 62
+++ + R+E+ +HP+NK+ + +F L + + FVF + ID+ D NA +
Sbjct: 2 AQEEQNNRKEKSELHPRNKH-RSRYNFKQLTATSKELKRFVFKNEHNDDSIDFADQNAVK 60
Query: 63 ELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFD 121
L R LL + + ++ W IP LCP +P R++YIH++ DLL S+ + G V D
Sbjct: 61 ALNRALLKYFYNISQWDIPQDFLCPPIPGRADYIHYVADLLGSSNKGKNPK-GANVHVLD 119
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
IG GANCIYP++G GWSFVGS++ ++++ A++ V++N + +EIR+
Sbjct: 120 IGVGANCIYPIVGHQEYGWSFVGSEIDPLSVDSAKRIVEANKPLQGAVEIRQ-------- 171
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
QSS G + +V E+
Sbjct: 172 -----------------------------------------QSSKMG--IFRNIVGAKER 188
Query: 242 FDFCICNPPFFESMEEA-----------GLNPKT-----SCGGTPEEMVCSGGERAFITR 285
FD +CNPPF S++EA G N K + GG E+ C GGERAF+ +
Sbjct: 189 FDAVVCNPPFHASLKEAEQGTRQKWRNLGGNEKEVKHVLNFGGNKAELWCPGGERAFVEQ 248
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I S +K W+TS+V + +NLK + S L V+T + QGQ +AW+F
Sbjct: 249 MIIQSAQIKNQVLWFTSLVSKSANLKSIYSALVNANAFEVRTVQMSQGQKISRFVAWTF 307
>gi|423688402|ref|ZP_17663205.1| 23S rRNA mA1618 methyltransferase [Vibrio fischeri SR5]
gi|371492905|gb|EHN68511.1| 23S rRNA mA1618 methyltransferase [Vibrio fischeri SR5]
Length = 319
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 165/361 (45%), Gaps = 86/361 (23%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ ++HP+NK++ N DF L +PFV ++ G I+++D A + L + LL H
Sbjct: 10 KKSLHPRNKHTGNY-DFPALIKACAELKPFVETNQYGNESINFSDPQAVKALNKALLAHF 68
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + +W IP G LCP +P R++YIH I DLL+ IPT G KVKG D+G GANC
Sbjct: 69 YNVPFWDIPQGYLCPPIPGRADYIHNIADLLAITNEGTIPT----GKKVKGLDVGVGANC 124
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YP++G WSFVGSD+ +++ A +NP + IE R N E+
Sbjct: 125 VYPIIGNREYQWSFVGSDIDPQSIKMASFIANNNPSLKG-IECRLQKNEEN--------- 174
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G+++ E FDF +CN
Sbjct: 175 ------------------------------------------IFKGIIKPTEFFDFTMCN 192
Query: 249 PPFFESMEEAGL------------------------NPKT-SCGGTPEEMVCSGGERAFI 283
PPF S EA N K + GG E+ C GGE AFI
Sbjct: 193 PPFHASEAEATAGTERKQKNLAANKAKKGHAFQEMQNAKALNFGGQKAELWCEGGELAFI 252
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
++ + S +W+T+++ +K N+ L +L K+GV +KT E QGQ +AW+
Sbjct: 253 LKMAQQSREFSLQVQWFTTLISKKENVAELYKELEKIGVKTIKTIEMAQGQKISRFVAWT 312
Query: 344 F 344
+
Sbjct: 313 Y 313
>gi|197337453|ref|YP_002158793.1| putative methyltransferase YbiN [Vibrio fischeri MJ11]
gi|254807099|sp|B5EVS5.1|RLMF_VIBFM RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|197314705|gb|ACH64154.1| putative methyltransferase YbiN [Vibrio fischeri MJ11]
Length = 319
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 165/361 (45%), Gaps = 86/361 (23%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ ++HP+NK++ N DF L +PFV ++ G I+++D A + L + LL H
Sbjct: 10 KKSLHPRNKHTGNY-DFPALIKACAELKPFVETNQYGNESINFSDPQAVKALNKALLAHF 68
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + +W IP G LCP +P R++YIH I DLL+ IPT G KVKG D+G GANC
Sbjct: 69 YNVPFWDIPQGYLCPPIPGRADYIHNIADLLAITNEGTIPT----GKKVKGLDVGVGANC 124
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YP++G WSFVGSD+ +++ A +NP + IE R N E+
Sbjct: 125 VYPIIGNREYQWSFVGSDIDPQSIKMASFIANNNPSLKG-IECRLQKNEEN--------- 174
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G+++ E FDF +CN
Sbjct: 175 ------------------------------------------IFKGIIKPTEFFDFTMCN 192
Query: 249 PPFFESMEEAGL------------------------NPKT-SCGGTPEEMVCSGGERAFI 283
PPF S EA N K + GG E+ C GGE AFI
Sbjct: 193 PPFHASEAEATAGTERKQKNLAANKAKKGHSFQEMQNAKALNFGGQKAELWCEGGELAFI 252
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
++ + S +W+T+++ +K N+ L +L K+GV +KT E QGQ +AW+
Sbjct: 253 LKMAQQSREFSLQVQWFTTLISKKENVAELYKELEKIGVKTIKTIEMAQGQKISRFVAWT 312
Query: 344 F 344
+
Sbjct: 313 Y 313
>gi|205829727|sp|Q32I85.2|RLMF_SHIDS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
Length = 308
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R+++IH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADHIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QMMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|301051270|ref|ZP_07198098.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300297087|gb|EFJ53472.1| conserved hypothetical protein [Escherichia coli MS 185-1]
Length = 308
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 158/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +C
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCT 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHNSATAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|357619207|gb|EHJ71877.1| putative methyltransferase 10 domain containing [Danaus plexippus]
Length = 483
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 156/336 (46%), Gaps = 66/336 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N Y + PPDFA LA Y F G+ ID+ D R LT LL D L
Sbjct: 7 MHPNNIY-KTPPDFAKLAKTYKEFSDIAKMDVTGKVTIDFKDPQVLRILTTCLLKSDFNL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP+ +L PT+P R NYI WIEDL+ N I + + G DIGTGA IYPLL A
Sbjct: 66 DVLIPEDRLVPTLPLRLNYILWIEDLM--NFI----NKKESITGLDIGTGACAIYPLLAA 119
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
W VG++ + +L A +NV+ N ++Q +T K +
Sbjct: 120 VKNKWMMVGTETDEESLLKATENVQRN-------------------NLQNLITLKQNPTK 160
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
S +D D + + F+FC+CNPPF+ ++
Sbjct: 161 SIVDFMFADD--------------------------------NSQVFEFCMCNPPFYTNV 188
Query: 256 EE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS 308
+E A PK G+P E++ GGE F +IIE+S K YT+MVG K
Sbjct: 189 QELWESRSPARPEPKNGFTGSPHELITEGGELQFCRKIIEESKLYKDRILIYTTMVGHKH 248
Query: 309 NLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
NLK L+ L+ + TEF QG+ RWGLAW++
Sbjct: 249 NLKELVLDLKAEAIKYT-ITEFCQGRVTRWGLAWTY 283
>gi|89093001|ref|ZP_01165952.1| hypothetical SAM-dependent methyltransferase [Neptuniibacter
caesariensis]
gi|89082651|gb|EAR61872.1| hypothetical SAM-dependent methyltransferase [Oceanospirillum sp.
MED92]
Length = 306
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 162/346 (46%), Gaps = 69/346 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N + +F LL + P +P V+ + GR ID+++ A + L + LL ++G+
Sbjct: 1 MHPNNPHCGGY-NFDLLCAAVPELKPCVYQAASGRESIDFSNPLAVKLLNQALLKTEYGI 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IP+G LCP +P R++YIH + +LL+ + + G VKG DIG+GANCIYP+LG
Sbjct: 60 EHWDIPEGYLCPPIPGRADYIHALAELLAKDNGGEVPQ-GRYVKGLDIGSGANCIYPILG 118
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
W FVGSD+ V++ A+ VK NP + ++IR+ N
Sbjct: 119 VCSYDWRFVGSDIDPVSVNTAKHLVKFNPQLKGKVDIRQQSNPNQ--------------- 163
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G++++ E F F +CNPPF S
Sbjct: 164 ------------------------------------IFKGIIKENESFAFTLCNPPFHAS 187
Query: 255 MEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
+EA + + + G E+ C GGE AFI R++++S Q +W
Sbjct: 188 AKEANQANLRKLRNLTGKSQVKTELNFAGQNNELWCEGGEIAFIKRMVKESATYGQNCQW 247
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
++ +V +K NLK + L+ V T E QGQ +AW+F+
Sbjct: 248 FSCLVSKKENLKPIYRSLQNARAKKVATIEMAQGQKVSRFIAWTFL 293
>gi|146299930|ref|YP_001194521.1| SAM-dependent methyltransferase [Flavobacterium johnsoniae UW101]
gi|205829559|sp|A5FHX5.1|RLMF_FLAJO RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|146154348|gb|ABQ05202.1| protein of unknown function DUF890 [Flavobacterium johnsoniae
UW101]
Length = 316
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 171/361 (47%), Gaps = 77/361 (21%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
+ ++ +HP+N + DF LL S P + F+ ++ G +D+++ A + L
Sbjct: 2 KAENNSQKDNLHPRNLHRSRY-DFELLISNCPELKAFISINKHGIETVDFSNPLAVKTLN 60
Query: 66 RVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFD 121
+ LL + + NW IP LCP +P R++YIH++ DLL+ + IP G+ V G D
Sbjct: 61 KALLQTYYDIQNWDIPKNYLCPPIPGRADYIHYLADLLAETNNGKIPE----GNSVMGLD 116
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
IGTGAN IYP+LG S+ WSFV +D+ ++E A K +++NP + + + ++
Sbjct: 117 IGTGANLIYPILGNSIYNWSFVATDIYKTSIENASKIIEANPRLIDAVSLQ--------- 167
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
++ EP + ++ ++
Sbjct: 168 ------------------------QQTEPRF------------------IFKNIIIPEDR 185
Query: 242 FDFCICNPPFFESMEEA---------GLNPK--------TSCGGTPEEMVCSGGERAFIT 284
F F +CNPPF S EEA LNPK + GG E+ C+GGE FIT
Sbjct: 186 FTFTMCNPPFHASAEEANKSTSRKVSNLNPKEKKNTNPVLNFGGQNAELWCNGGEIGFIT 245
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++I +SV W+T++V +K NL + L+KV VKT E QGQ +AWSF
Sbjct: 246 QMIYESVKYASQVLWFTTLVSKKENLSSIYKTLKKVNAVSVKTIEMSQGQKNSRIVAWSF 305
Query: 345 V 345
+
Sbjct: 306 L 306
>gi|114045635|ref|YP_736185.1| putative SAM-dependent methyltransferase [Shewanella sp. MR-7]
gi|123131855|sp|Q0I0H7.1|RLMF_SHESR RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|113887077|gb|ABI41128.1| protein of unknown function DUF890 [Shewanella sp. MR-7]
Length = 364
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 168/361 (46%), Gaps = 76/361 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N + N DF L + YP + FV + G ID+ D A + L LLLH
Sbjct: 49 EKKRLHPRNLHI-NGYDFPALMASYPKLKAFVRPTPYGALSIDFADPLAVKTLNAALLLH 107
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+GL +W IP G LCP +P R +Y+H++ DLL + ++ DIGTGAN +Y
Sbjct: 108 HYGLAFWDIPKGALCPPIPGRVDYLHYLADLLFEG---GKVKRAAAIRALDIGTGANGVY 164
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
+LG + W FV SD+ +L NV+ R +DN+ PS+Q L+ +
Sbjct: 165 AILGHQVYDWQFVASDINPQSLT----NVQ-----------RIIDNN---PSLQGHLSLR 206
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
QD+ V G+++ ++F+ +CNPP
Sbjct: 207 RQQDDKA---------------------------------VFKGIIQASDRFELTLCNPP 233
Query: 251 FFESMEEA---------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDS 290
F S++EA G PK + GG E+ C GGE+ F+ +I +S
Sbjct: 234 FHGSLKEASEGSLRKVRNLQLNRGEQPKATSATLNFGGQAAELWCQGGEKQFLATMIRES 293
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
A + W+TS+V ++ NLK L K+GV VKT E QG LAWSF A++
Sbjct: 294 QAFAEQCLWFTSLVSKQENLKPCYQALEKLGVDTVKTIEMQQGNKFTRVLAWSFHSQAKR 353
Query: 351 I 351
+
Sbjct: 354 L 354
>gi|425304321|ref|ZP_18694102.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
N1]
gi|408231201|gb|EKI54484.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
N1]
Length = 308
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAVEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|317047477|ref|YP_004115125.1| rRNA (adenine-N(6)-)-methyltransferase [Pantoea sp. At-9b]
gi|316949094|gb|ADU68569.1| rRNA (adenine-N(6)-)-methyltransferase [Pantoea sp. At-9b]
Length = 308
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 160/348 (45%), Gaps = 68/348 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
HP+N++ + DFA L + +P V + G +D+ D A L + LL + L
Sbjct: 10 FHPRNRH-QGRYDFAALTAAHPPLADKVRPNGYGDLSVDFADPQAVMLLNQALLKLFYNL 68
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
NW +P G L P VP R++YIH + DLL+++ R+ D + DIG GANCIYPL+G
Sbjct: 69 NWQLPAGYLTPPVPGRADYIHALADLLATDNGGVIPRDVDVM---DIGCGANCIYPLIGH 125
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ GW F G+D+T A+ A + V SNP + I +R+ E+
Sbjct: 126 AEYGWRFTGTDITAEAITAANQIVASNPGLQRGIRLRRQKQPEA---------------- 169
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+ GVV E++ +CNPPF S
Sbjct: 170 -----------------------------------IFAGVVHKNERYQAVLCNPPFHASA 194
Query: 256 EEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
E+A GL T + GG E+ C GGER F+ ++I +SVA W+TS
Sbjct: 195 EDAAAGSQRKVRNLGLKKSTPLNFGGQHNELWCDGGERQFVGQMIAESVAFADRIVWFTS 254
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+V RK NL L +LR + V+ E QGQ +AW+F+P A +
Sbjct: 255 LVSRKENLPALRDQLRDLDAYDVRIIEMAQGQKQSRFIAWTFLPEAAR 302
>gi|389841627|ref|YP_006343711.1| SAM-dependent methyltransferase [Cronobacter sakazakii ES15]
gi|387852103|gb|AFK00201.1| putative SAM-dependent methyltransferase [Cronobacter sakazakii
ES15]
Length = 309
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 159/356 (44%), Gaps = 77/356 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N++ DF L P+ FV S G P ID+ D A + L + LL H
Sbjct: 4 KPGLHPRNRHHSRY-DFDALTESCPALGAFVRPSPAGEPTIDFADPQAVKTLNQALLAHF 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG----FDIGTGAN 127
+G+ W IPDG LCP VP R++YIH + DLL+ NG + DIG GAN
Sbjct: 63 YGVREWDIPDGFLCPPVPGRADYIHHLADLLAEG-------NGGALPAQASVLDIGVGAN 115
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW F G+D +D A+ A + +NP ++ I +R+ + TP
Sbjct: 116 CIYPLIGQHEYGWRFTGTDTSDEAIRSASAIIDANPGLNRAIRLRR----QKTPGA---- 167
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ G++ E +D +C
Sbjct: 168 -------------------------------------------IFNGIIHKNESYDATLC 184
Query: 248 NPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF +S + A GL + GG +E+ C GGE FIT++I +S
Sbjct: 185 NPPFHDSADAAEAGNARKRRNLGLAADSGLNFGGQQQELWCEGGEVGFITQMIAESKLFA 244
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ W+T+++ + NL L L + G V E QGQ +AWSF+ A++
Sbjct: 245 RQVLWFTTLISKGDNLPLLYRALEQAGAVKVVKKEMAQGQKQSRFIAWSFLDTAQR 300
>gi|410094175|ref|ZP_11290626.1| 23S rRNA mA1618 methyltransferase [Pseudomonas viridiflava
UASWS0038]
gi|409758390|gb|EKN43693.1| 23S rRNA mA1618 methyltransferase [Pseudomonas viridiflava
UASWS0038]
Length = 337
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 167/357 (46%), Gaps = 72/357 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 25 EKATLHPRNRH-QGHYDFPKLIKSSPELAKFVILNPYGKESIDFANPQAVRVFNRALLKA 83
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP +P R++Y+H++ DLL+ R G VK DIGTGANCIY
Sbjct: 84 FYGVAHWDIPADYLCPPIPGRADYLHFLADLLAEGNGGEIPR-GASVKALDIGTGANCIY 142
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG S GW FVGSD+ A+ A VK+N ++ + I +R N +
Sbjct: 143 PLLGHSDYGWHFVGSDIDSTAIAAATTIVKAN-NLHKTISVRLQANRKH----------- 190
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ E+FD +CNPP
Sbjct: 191 ----------------------------------------ILSGLLDSAERFDVSLCNPP 210
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F S+EEA P + GG +E+ C GGE F+T++I++S +
Sbjct: 211 FHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIRFVTQLIQESALI 270
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W++++V + SNL + S L+K G V+ E QGQ +AW+++ A++
Sbjct: 271 PTQVLWFSTLVSKASNLPPIQSALKKAGALEVRVVEMGQGQKQSRFVAWTYLDKAQQ 327
>gi|393219377|gb|EJD04864.1| hypothetical protein FOMMEDRAFT_153997 [Fomitiporia mediterranea
MF3/22]
Length = 461
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 221/480 (46%), Gaps = 91/480 (18%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFY-SRDGRPRIDWTDFNATRELTRVLLLHDHG 74
+H +N Y + P DF LA +YP +PF+ S ID+ + A R LT LL D
Sbjct: 1 MHDRNPY-KTPIDFVSLAKIYPKLKPFLLKPSGADVSTIDFKNVEAQRCLTEALLWRDFQ 59
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+ + +P+G+LCP VPNR NYI W++D++S + R +V G DIGTGA+ IYPLLG
Sbjct: 60 VKFSLPEGRLCPPVPNRLNYILWLQDIISESFHAFEKR--PEVIGIDIGTGASAIYPLLG 117
Query: 135 ASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
+ W F+G+++ V+ E A NV+ N + I I K+ S+P+
Sbjct: 118 CKVDPTWKFIGTEIDPVSHESAIANVEKN-GLGNWIRICKL----SSPT----------- 161
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF- 252
P + ++ P E F F +CNPPF+
Sbjct: 162 ----------------PILTPFYDYP-------------------DECFTFTMCNPPFYA 186
Query: 253 ------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA--LKQTFRWYTSMV 304
S E L P + C G+ EMV GGE F+ R++E+S ++ W+TSM+
Sbjct: 187 DTNDVERSAEGKALEPNSVCTGSEVEMVTPGGEETFVQRMVEESAGTNIRNRCLWFTSML 246
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF----VPP--ARKIISPHVA- 357
G+ S+++ + + LR V TE VQGQT RW +AWSF +P AR + SPH A
Sbjct: 247 GKFSSVEKIRNVLRAHDVDNYALTELVQGQTRRWVVAWSFTDLRLPDNLARNLPSPHHAL 306
Query: 358 --EKKNLSFMLEGVQRQFSALDVLQSIE----TFFSASGASCKLNASSFTVNITVSNDQC 411
+ N E V R ++DV + E + SG + + T S+DQ
Sbjct: 307 LPPRNN----CEQVLRNSGSVDVAELQEDLTNVLMALSGVTVVSDPDDHAEEPTSSSDQ- 361
Query: 412 NTILKNEVNRVDEGPTSKHLEETSSSSSCLNASSTSLSFRTAVFQQIPGTLLVQGSLLHK 471
+RV S +L +++ ++ A+ S + R + P ++V S HK
Sbjct: 362 --------DRVRCNKESIYLRISATENTWTRAARRSANSRISQSSGKPVVMIVDISAKHK 413
>gi|336249403|ref|YP_004593113.1| 23S rRNA mA1618 methyltransferase [Enterobacter aerogenes KCTC
2190]
gi|334735459|gb|AEG97834.1| 23S rRNA mA1618 methyltransferase [Enterobacter aerogenes KCTC
2190]
Length = 304
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 163/357 (45%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ E+P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAEKPGLHPRNRHHQRY-DLPALCQTHPELQSYITLNPAGEQTIDFANPLAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S IP + DIGTGA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAQDSGEIPKNATI------LDIGTGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+GA GW F GS++ A A+ + NP ++ I +R+
Sbjct: 115 NCIYPLIGAHEYGWRFTGSEVNPQAFASAQAIINGNPGLTRQIRLRR------------- 161
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
Q E G + G++ E +D +
Sbjct: 162 ------QKE--------------------------------GQAIFTGIIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S A G + + GG +E+ C GGE AFI+++I +S
Sbjct: 184 CNPPFHDSAASARAGGERKRRNLGLGEDSVLNFGGQQQELWCEGGEVAFISQMIRESQQF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L +VG V E QGQ +AWSF+ A++
Sbjct: 244 GRQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR 300
>gi|388546232|ref|ZP_10149509.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. M47T1]
gi|388275759|gb|EIK95344.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. M47T1]
Length = 314
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 162/350 (46%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+PT HP+N++ + DF L P +V + G+ ID+ + A + R LL
Sbjct: 6 KPTFHPRNRH-QGRYDFPQLIKSSPELGKYVILNPYGKESIDFANPAAVKVFNRALLKAL 64
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ +W IP+G LCP +P R++YIH DLL+ R G V+ DIGTGANCIYP
Sbjct: 65 YGIQHWTIPEGYLCPPIPGRADYIHASADLLADTNGGEIPR-GSSVRVLDIGTGANCIYP 123
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W FVGSD+ VAL A V++N + + I +R DN+
Sbjct: 124 LLGHSDYRWQFVGSDIDSVALASARAIVQAN-KLDKGISLRPQDNARH------------ 170
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G+++ E+FD +CNPPF
Sbjct: 171 ---------------------------------------ILTGLLKPDERFDLTLCNPPF 191
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S+EEA P + GG E+ C GGE F+T++I +SV +
Sbjct: 192 HASLEEATRGSQRKWRALGKADPKRKLPVLNFGGQSSELWCEGGEIRFVTQLINESVGVG 251
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
Q W++++V + SNL + L+K G V+ E QGQ +AW+F
Sbjct: 252 QQVLWFSTLVSKASNLPPIQVALKKAGALQVRVVEMGQGQKQSRFVAWTF 301
>gi|126176412|ref|YP_001052561.1| putative SAM-dependent methyltransferase [Shewanella baltica OS155]
gi|125999617|gb|ABN63692.1| protein of unknown function DUF890 [Shewanella baltica OS155]
Length = 375
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 164/368 (44%), Gaps = 75/368 (20%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K + R E + +HP+N + N DF L + + + FV + G ID+ D A + L
Sbjct: 55 KDKPRAEIKKALHPRNAHL-NGYDFPALYAAFTQLKTFVRPTPYGTLSIDFADPLAVKTL 113
Query: 65 TRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LL H +G+ W IP G LCP +P R +Y+H++ DLL+ S DK + DIG
Sbjct: 114 NAALLKHHYGIGAWDIPQGALCPPIPGRVDYVHYVADLLAEG---DKSCAMDKARVLDIG 170
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP+LG + GW +V SD+ N+ S ++
Sbjct: 171 TGANGIYPILGCQVYGWQYVASDI----------------------------NAHSLTNV 202
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
Q + E N + G + +P + F GV++ E+F+
Sbjct: 203 QSII-------EQNPVLQGRISLRLQPDDKAVFK----------------GVIQAEERFE 239
Query: 244 FCICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFIT 284
+CNPPF SM EA LN PK + GG E+ C GGER F+
Sbjct: 240 LTLCNPPFHASMAEASEGTKRKVNNLQLNRGSSVKAAPKLNFGGQAAELWCQGGERQFLA 299
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I +S W+TS+V ++ NLK L ++ V VKT E QG LAWSF
Sbjct: 300 TMIRESQMFADQCLWFTSLVSKQENLKPCYQALAQLNVDTVKTIEMQQGNKITRVLAWSF 359
Query: 345 VPPARKII 352
A++ I
Sbjct: 360 QSAAKRKI 367
>gi|418023072|ref|ZP_12662058.1| Ribosomal RNA large subunit methyltransferase F [Shewanella baltica
OS625]
gi|353538074|gb|EHC07630.1| Ribosomal RNA large subunit methyltransferase F [Shewanella baltica
OS625]
Length = 365
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 163/366 (44%), Gaps = 75/366 (20%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K R R E + +HP+N + N DF L S +P + FV + G ID+ D A + L
Sbjct: 45 KDRPRVEIKKALHPRNAHL-NGYDFPALISAFPRLKTFVRPTPYGALSIDFADPLAVKTL 103
Query: 65 TRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LL H +G+ W IP G LCP +P R +Y+H++ DLL+ S K + DIG
Sbjct: 104 NAALLKHHYGIGAWDIPQGALCPPIPGRVDYVHYVADLLAEG---DKSCAISKARVLDIG 160
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP+LG + GW +V SD+ N+ S ++
Sbjct: 161 TGANGIYPILGCQVYGWQYVASDI----------------------------NAHSLANV 192
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
Q + E N + G + +P + F G+++ E+F+
Sbjct: 193 QSII-------EQNPVLQGRISLRLQPDDKAVFK----------------GIIQAEERFE 229
Query: 244 FCICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFIT 284
+CNPPF SM EA LN PK + GG E+ C GGER F+
Sbjct: 230 LTLCNPPFHASMAEASEGTKRKVNNLQLNRGSSVKAAPKLNFGGQAAELWCQGGERQFLA 289
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I +S W+TS+V ++ NLK L ++ V VKT E QG LAWSF
Sbjct: 290 TMIRESQMFADQCLWFTSLVSKQENLKPCYQALAQLKVDTVKTIEMQQGNKITRVLAWSF 349
Query: 345 VPPARK 350
A++
Sbjct: 350 QSAAKR 355
>gi|386343176|ref|YP_006039542.1| rRNA (adenine-N(6)-)-methyltransferase [Shewanella baltica OS117]
gi|205829732|sp|A3DAC9.2|RLMF_SHEB5 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|334865577|gb|AEH16048.1| rRNA (adenine-N(6)-)-methyltransferase [Shewanella baltica OS117]
Length = 365
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 164/368 (44%), Gaps = 75/368 (20%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K + R E + +HP+N + N DF L + + + FV + G ID+ D A + L
Sbjct: 45 KDKPRAEIKKALHPRNAHL-NGYDFPALYAAFTQLKTFVRPTPYGTLSIDFADPLAVKTL 103
Query: 65 TRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LL H +G+ W IP G LCP +P R +Y+H++ DLL+ S DK + DIG
Sbjct: 104 NAALLKHHYGIGAWDIPQGALCPPIPGRVDYVHYVADLLAEG---DKSCAMDKARVLDIG 160
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP+LG + GW +V SD+ N+ S ++
Sbjct: 161 TGANGIYPILGCQVYGWQYVASDI----------------------------NAHSLTNV 192
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
Q + E N + G + +P + F GV++ E+F+
Sbjct: 193 QSII-------EQNPVLQGRISLRLQPDDKAVFK----------------GVIQAEERFE 229
Query: 244 FCICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFIT 284
+CNPPF SM EA LN PK + GG E+ C GGER F+
Sbjct: 230 LTLCNPPFHASMAEASEGTKRKVNNLQLNRGSSVKAAPKLNFGGQAAELWCQGGERQFLA 289
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I +S W+TS+V ++ NLK L ++ V VKT E QG LAWSF
Sbjct: 290 TMIRESQMFADQCLWFTSLVSKQENLKPCYQALAQLNVDTVKTIEMQQGNKITRVLAWSF 349
Query: 345 VPPARKII 352
A++ I
Sbjct: 350 QSAAKRKI 357
>gi|330448248|ref|ZP_08311896.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492439|dbj|GAA06393.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 333
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 169/372 (45%), Gaps = 88/372 (23%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
+++ + + +HP+N + E DFA L P V + G ++++D A + L
Sbjct: 3 QKKNAQPKKGLHPRNPHRERY-DFAKLIQSTPELAQHVSENPYGDLSVNFSDPAAVKTLN 61
Query: 66 RVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFD 121
+ LL H + +N+W IP G LCP +P R++Y+H+I DLL+ N IP G V+G D
Sbjct: 62 KALLSHFYKVNYWDIPAGFLCPPIPGRADYLHYIADLLAESNDNTIP----QGKGVRGLD 117
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
+G GANC+YP++G + GW FVG+D+ ++++ A+ +NP + I++R N+++
Sbjct: 118 VGVGANCVYPIIGHRVYGWQFVGADIDPISIKSAKFIADANPSLKGNIKLRLQKNADN-- 175
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
+ G++ E
Sbjct: 176 -------------------------------------------------IFTGMINADEV 186
Query: 242 FDFCICNPPFFESMEEAGL----------------------------NPKTSCGGTPEEM 273
FDF +CNPPF S+EEA P + GG E+
Sbjct: 187 FDFTLCNPPFHASLEEATAGSERKVRNLAANANKKQKPRQTNFNAQTKPVLNFGGQKAEL 246
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE AFI ++++ S W+T++V +K NL + +L+K VKT E QG
Sbjct: 247 WCPGGEAAFIQKMVKQSAEKAGQCFWFTTLVSKKENLPAIYQQLQKANAVDVKTIEMSQG 306
Query: 334 QTCRWGLAWSFV 345
Q +AW+F+
Sbjct: 307 QKISRIVAWTFL 318
>gi|196010417|ref|XP_002115073.1| hypothetical protein TRIADDRAFT_28751 [Trichoplax adhaerens]
gi|190582456|gb|EDV22529.1| hypothetical protein TRIADDRAFT_28751 [Trichoplax adhaerens]
Length = 294
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 171/342 (50%), Gaps = 74/342 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFV-FYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
+H +N+Y +P +F LA +P +PFV + + I++ D NA +TR LL D
Sbjct: 1 MHERNRYKISP-NFEELARKFPELQPFVKINKKRNKCFINFRDSNALSAVTRALLKIDFN 59
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ +P +L PTVP R NYIHW+EDL+ + + D + G DIGTGA+CIYPLL
Sbjct: 60 LHVELPMDRLIPTVPLRLNYIHWLEDLIQTT-------HNDDIFGIDIGTGASCIYPLLA 112
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A + GW+F+ +++ + +A+KNV N + E I+I+ V + QD
Sbjct: 113 ARMNGWNFLATEVDQRCVHYAQKNVTIN-DLDEKIKIKMV----------------AAQD 155
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC--NPPFF 252
+L +R+ + + C NPPFF
Sbjct: 156 ------------------------------------ILCTPLRNENRQQYDFCMCNPPFF 179
Query: 253 -ESMEEAGLN-------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
+S++ G N PK+ C G E++ GGE F+ IIEDS L+ + YTSM+
Sbjct: 180 IDSLDAKGANRTSVRPQPKSVCTGKGSEIIYDGGEVEFVKCIIEDSTQLQSRVKCYTSML 239
Query: 305 GRKSNLKFLISKLRKVGVTIV--KTTEFVQGQTCRWGLAWSF 344
G+KS+L +I+ L+ V+ V T+ F QG T RW +AWSF
Sbjct: 240 GKKSSLDHVIAILKDKNVSTVYYTTSIFSQGNTARWSVAWSF 281
>gi|117620512|ref|YP_855856.1| SAM-dependent methyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|205829543|sp|A0KHV5.1|RLMF_AERHH RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|117561919|gb|ABK38867.1| conserved hypothetical protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 318
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 158/352 (44%), Gaps = 75/352 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ + +HP+N++ + P DF L P +PFVF + G +D+ D A + L + LL
Sbjct: 6 DRKSGLHPRNRH-QAPYDFDALCQRTPELQPFVFVNEHGTQTLDFADPAAVKALNKALLA 64
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGAN 127
+G+ W +P G LCP +P R +Y+H + DLL S+ +PT G V+ DIG GAN
Sbjct: 65 LHYGIAHWDLPAGYLCPPIPGRVDYLHRVADLLAESAGKVPT----GKGVRVLDIGVGAN 120
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLGA GW FVGSD+ V+++ A KSN + IE R L
Sbjct: 121 CIYPLLGAREYGWRFVGSDIDPVSVKAATLLAKSN-GLGSQIECR--------------L 165
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
GK+ + G+V E+F +C
Sbjct: 166 QGKAGD-------------------------------------IFQGIVAQRERFALTLC 188
Query: 248 NPPFFESM---------------EEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S+ +EA P + GG E+ C GGE AF+ +I S A
Sbjct: 189 NPPFHASLAEASKGTERKLRNLGKEATAKPVLNFGGQKAELWCEGGEAAFLASMITQSKA 248
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++S+V +K NL L ++G V+ E QG LAWSF
Sbjct: 249 FASQCLWFSSLVSKKENLPAAKQGLSRIGARQVRVLEMAQGNKISRVLAWSF 300
>gi|395799181|ref|ZP_10478463.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. Ag1]
gi|421140478|ref|ZP_15600485.1| hypothetical protein MHB_14176 [Pseudomonas fluorescens BBc6R8]
gi|395336868|gb|EJF68727.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. Ag1]
gi|404508307|gb|EKA22270.1| hypothetical protein MHB_14176 [Pseudomonas fluorescens BBc6R8]
Length = 340
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 171/359 (47%), Gaps = 78/359 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N++ + DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRH-QGRYDFQALIKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKAFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIY 130
+N W IP LCP VP R++Y+H++ DLL+S +IP G VK DIG GANC+Y
Sbjct: 89 INHWDIPADYLCPPVPGRADYVHFLADLLASVNEGVIP----RGAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W+F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSEYRWNFLGSEVDPTAVAAAKAIVQSN-GLNKAIQLRQQTNPKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA +PK GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII 352
+ W++++V + SNL + + L+K GV + E QGQ +AW+F P+ + +
Sbjct: 273 QHKVLWFSTLVSKASNLPAIQTALKKAGVLESQVVEMSQGQKQSRFVAWTFQTPSEQQV 331
>gi|420390274|ref|ZP_14889542.1| 23S rRNA methyltransferase [Escherichia coli EPEC C342-62]
gi|391314598|gb|EIQ72148.1| 23S rRNA methyltransferase [Escherichia coli EPEC C342-62]
Length = 301
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 157/346 (45%), Gaps = 74/346 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ D A L + P F+ + G +D+ + A + L + LL H + +
Sbjct: 1 MHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAV 59
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANCIYPL
Sbjct: 60 ANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANCIYPL 113
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 114 IGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR------------------- 154
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ S + FN G++ EQ+D +CNPPF
Sbjct: 155 ----------------QKESGAIFN----------------GIIHKNEQYDATLCNPPFH 182
Query: 253 ESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
+S A GLN + GG +E+ C GGE AFI ++IE+S + W
Sbjct: 183 DSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAKQVMW 242
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 243 FTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 288
>gi|170769112|ref|ZP_02903565.1| conserved hypothetical protein [Escherichia albertii TW07627]
gi|170122184|gb|EDS91115.1| conserved hypothetical protein [Escherichia albertii TW07627]
Length = 308
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 158/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P ++ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELTQYLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IP+G LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPEGFLCPPVPGRADYIHHLADLLAEASGAIPVNA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETHSQALSSAQAIINANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
Q E+N + GV+ EQ+D +CN
Sbjct: 162 ----QKEANA--------------------------------IFSGVIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A G + + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLGRDDSLNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L +G V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDIGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|440288389|ref|YP_007341154.1| putative SAM-dependent methyltransferase [Enterobacteriaceae
bacterium strain FGI 57]
gi|440047911|gb|AGB78969.1| putative SAM-dependent methyltransferase [Enterobacteriaceae
bacterium strain FGI 57]
Length = 308
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 159/351 (45%), Gaps = 76/351 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ N D L P F+ + G I++ D A + L + LL H
Sbjct: 4 QKPGLHPRNRH-HNRYDLTALCQSCPELREFITLNPAGEQTINFADPQAVKTLNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG---FDIGTGAN 127
+G++ W IPDG LCP VP R++YIH + DLL T NG+ V+G DIG GAN
Sbjct: 63 FYGVSSWDIPDGFLCPPVPGRADYIHHLADLL-------TDENGNVVQGANVLDIGVGAN 115
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+GA W F GS+ A A+ V +NP ++ +I +R+ ++ES
Sbjct: 116 CIYPLIGAHEYRWRFTGSETHPQAFASAQAIVSANPSLTRMIRLRRQKDNESM------- 168
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
FN G++ EQ+D +C
Sbjct: 169 ----------------------------FN----------------GIIHKNEQYDATLC 184
Query: 248 NPPFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF +S A N + GG +E+ C GGE AFI ++I +S
Sbjct: 185 NPPFHDSAAAARAGGERKRRNLGQDRNDALNFGGQQQELWCEGGEVAFIKKMITESRDYA 244
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W+TS+V + NL L L VG V E QGQ +AWSF+
Sbjct: 245 RQVMWFTSLVSKGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWSFM 295
>gi|423119391|ref|ZP_17107075.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5246]
gi|376398570|gb|EHT11194.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5246]
Length = 306
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D +L +P + F+ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPVLCQAHPELQGFITLNPVGEQTIDFANPLAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ + IP + D+GTGA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLALDTGTIP------ENASILDVGTGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
N IYPL+GA GW F GS+++ A+ A+ + +NP +S I +R+
Sbjct: 115 NLIYPLIGAHEYGWRFTGSEISAEAIASAQAIINANPGLSRQIRLRR------------- 161
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
Q ES + G++ E FD +
Sbjct: 162 ------QKESGA--------------------------------IFSGIIHKNECFDATL 183
Query: 247 CNPPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S A G + + GG +E+ C GGE AFIT++I +S
Sbjct: 184 CNPPFHDSAASAQAGGERKRRNLGLGADSVMNFGGQQQELWCEGGEVAFITQMIRESQQF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L + G V E QGQ +AW+F+ A++
Sbjct: 244 GRQVKWFTSLVSRGDNLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFMDEAKR 300
>gi|299471080|emb|CBN78939.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 677
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 126/228 (55%), Gaps = 57/228 (25%)
Query: 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177
+G D+GTGA+CIYPLLGA + GWSF+ +++ V+ EWAEKNV+SN + E IE+R V
Sbjct: 279 RGVDVGTGASCIYPLLGAKVAGWSFLATEIDPVSAEWAEKNVRSN-DLQEKIEVRLV--- 334
Query: 178 ESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR 237
PS +S D+EA P P+L +
Sbjct: 335 ---PSPADS-----------------GDDEAAPG------------------PLLAALRE 356
Query: 238 DGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
+ FDF + NPPFFES +E + C GGE AF+T I+ DS+ L++
Sbjct: 357 EDGDFDFSMTNPPFFESADE---------------VACHGGEVAFVTAIVRDSLRLRERV 401
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
RWYTSMVG+K+N K L+ LR+ GV +TTEF QG+T RWGLAWSF
Sbjct: 402 RWYTSMVGKKANAKKLLRVLREAGVKNTRTTEFFQGRTVRWGLAWSFT 449
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 16 IHPKNKYSENPPDFALLASLYP-SFEPFVFYSRD-GRPRIDWTDFNATRELTRVLLLHDH 73
+H N Y PDF LA YP +F P V D GR IDW D A RELTRV+L HD
Sbjct: 108 MHDANLYRHYRPDFRELAREYPDTFGPHVRDDPDTGRAAIDWADPAAMRELTRVMLRHDF 167
Query: 74 GLNWW-IPDGQLCPTVPNRSNYIHWIEDLL 102
GL W P +LCP V NR NY+ W+ DL+
Sbjct: 168 GLREWDAPLDRLCPPVANRLNYVCWLSDLM 197
>gi|381187766|ref|ZP_09895328.1| ribosomal RNA large subunit methyltransferase F [Flavobacterium
frigoris PS1]
gi|379649554|gb|EIA08127.1| ribosomal RNA large subunit methyltransferase F [Flavobacterium
frigoris PS1]
Length = 315
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 172/362 (47%), Gaps = 75/362 (20%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ E+ +HP+N++ DF LL P +PFV + +D+++ A + L
Sbjct: 4 KTNTEKTNLHPRNQHRFRY-DFTLLIKNCPKLKPFVSINEHNIETVDFSNPEAVKTLNNA 62
Query: 68 LLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL+ + + NW IP LCP +P R++YIH+I DLL++ +IP G+ V+G DIG
Sbjct: 63 LLITYYDIKNWDIPANYLCPPIPGRADYIHYIADLLATTNNGVIPI----GETVQGLDIG 118
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
GANCIYP++G + GW FVG+D+ + A+E K +++NP + + I +++
Sbjct: 119 VGANCIYPIIGNASYGWGFVGTDIDEKAIENCGKIIEANPKLIDSISLQQ---------- 168
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
Q ES + ++ ++F
Sbjct: 169 ---------QTESRF--------------------------------IFKNIITPEDKFA 187
Query: 244 FCICNPPFFESMEEAGL----------NPKTS-----CGGTPEEMVCSGGERAFITRIIE 288
F ICNPPF S EEA N KT+ GG E+ C GGE FIT++I
Sbjct: 188 FTICNPPFHSSQEEATKSTVRKINNLENTKTTKLVLNFGGQNAELWCEGGELGFITQMIY 247
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
+S W+T++V ++S+L + L KV V +KT QGQ +AW+F+ +
Sbjct: 248 ESAKYPMQCLWFTTLVSKQSHLSSIYKTLNKVNVVEIKTINMAQGQKISRIIAWTFLSES 307
Query: 349 RK 350
++
Sbjct: 308 QQ 309
>gi|395500593|ref|ZP_10432172.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. PAMC 25886]
Length = 340
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 170/359 (47%), Gaps = 78/359 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N++ + DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRH-QGRYDFPALIKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKAFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIY 130
+N W IP LCP VP R++Y+H++ DLL+S +IP G VK DIG GANC+Y
Sbjct: 89 INHWDIPADYLCPPVPGRADYVHFLADLLASVNEGVIP----RGAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSEYRWHFLGSEVDPTAVAAAKAIVQSN-GLNKAIQLRQQTNPKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA +PK GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII 352
+ W++++V + SNL + + L+K GV + E QGQ +AW+F P+ + +
Sbjct: 273 QHKVLWFSTLVSKASNLPAIQTALKKAGVLESQVVEMSQGQKQSRFVAWTFQTPSEQQV 331
>gi|341877859|gb|EGT33794.1| hypothetical protein CAEBREN_09576 [Caenorhabditis brenneri]
Length = 477
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 160/352 (45%), Gaps = 78/352 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y PPDF LA YP F F Y +G+ D+ + A R LT+ LL D L
Sbjct: 7 MHPRNPYRNKPPDFKALALEYPEFRKFCHYVSNGKVVFDFREDAAVRCLTKTLLKKDFNL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ +P G L P VP + NY I+D+L +N + V G DIGTG +CI+ L+G
Sbjct: 67 DVILPTGHLVPRVPQKLNYCLLIDDILQANQL------SKDVVGIDIGTGTSCIHALIGT 120
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
W FV +D + A+ A +NV N +DNS + + T K+V
Sbjct: 121 RQFDWKFVATDGDENAVRSAHENVTRN----------NLDNSICV--VHVNPTVKTVL-- 166
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
MD+ M + +F FC+CNPPFFE
Sbjct: 167 --MDVMNSMAD---------------------------------REFTFCMCNPPFFEKW 191
Query: 256 EEAGL----------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
E+ P ++ T E+ GGE +F+ RII+DSV L
Sbjct: 192 EKDDKFCQEPSVSNNTYSNRIDSDIRSAPHSATFATSAELYIDGGEISFVNRIIDDSVCL 251
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTI-VKTTEFVQGQTCRWGLAWSF 344
+ + YT+M+GRKS+LK L +L++ G I + QG+T RW LAW+F
Sbjct: 252 RDRIKVYTTMIGRKSSLKPLQQRLQRFGDDIKFIVSPLNQGKTKRWMLAWTF 303
>gi|373488133|ref|ZP_09578799.1| 23S rRNA m(6)A-1618 methyltransferase [Holophaga foetida DSM 6591]
gi|372007907|gb|EHP08536.1| 23S rRNA m(6)A-1618 methyltransferase [Holophaga foetida DSM 6591]
Length = 329
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 159/356 (44%), Gaps = 77/356 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + DF L P PFV + G D+ + A R L + LL H +G+
Sbjct: 21 LHPRNPH-RGRYDFGSLVRSCPELGPFVAVNPYGDLSTDFANPQAVRALNKALLKHVYGV 79
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIYP 131
+W IP LCP +P R++YIH + DLL S IP G ++ DIG GANCIYP
Sbjct: 80 EHWEIPAEFLCPPIPGRADYIHHLADLLGSCHGGAIP----KGGSIRVLDIGVGANCIYP 135
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
+LG GW FVGSD+ L A+ + NP ++ IE+R+ D E
Sbjct: 136 ILGHCEYGWRFVGSDIDARGLAAAKNILHYNPGLATAIELRRQDTPER------------ 183
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ GVV+ E F+ +CNPPF
Sbjct: 184 ---------------------------------------IFSGVVKADEVFELSMCNPPF 204
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S+ EA P + GG E+ CSGGE AF+ R+IE+S +
Sbjct: 205 HASLREAREGTLRKWRNLGREAGERKAPVLNFGGQGAELWCSGGEAAFVRRMIEESAGIP 264
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V + ++L L + L++ G T +T E QGQ LAW+F+ P +
Sbjct: 265 TRCLWFTSLVSKSASLPGLRAALKQAGATEFRTIEMAQGQKKSRILAWTFIGPEER 320
>gi|311280314|ref|YP_003942545.1| rRNA (adenine-N(6)-)-methyltransferase [Enterobacter cloacae SCF1]
gi|308749509|gb|ADO49261.1| rRNA (adenine-N(6)-)-methyltransferase [Enterobacter cloacae SCF1]
Length = 308
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 160/350 (45%), Gaps = 70/350 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L + P F+ + G +D++ A + L + LL
Sbjct: 2 KTQKPGLHPRNRHHQRY-DLPALCQICPELSAFLLLNPAGEQTVDFSRPEAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + W IPDG LCP VP R++YIH + DLL+ T + DIGTGANC
Sbjct: 61 AFFYDVKQWDIPDGFLCPPVPGRADYIHHLADLLAE----TCGEIPHQANILDIGTGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G+ GW F GS++ AL A+ V +NP +S I +R+
Sbjct: 117 IYPLIGSHEYGWRFTGSEVHSQALSSAQAIVNANPGLSRQIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +P + +L G+V E +D +CN
Sbjct: 162 ------------------QKDPKA------------------ILCGIVHKNEVYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GL + + GG +E+ C GGE AFI+++I +S Q
Sbjct: 186 PPFHDSAASAQQGSERKRRNLGLGDRDALNFGGQQQELWCEGGEVAFISQMIAESAQFAQ 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L +VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTSLVSRGDNLPELYRALTRVGAVKVVKKEMAQGQKQSRFIAWTFL 295
>gi|113968473|ref|YP_732266.1| putative SAM-dependent methyltransferase [Shewanella sp. MR-4]
gi|123130862|sp|Q0HP08.1|RLMF_SHESM RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|113883157|gb|ABI37209.1| protein of unknown function DUF890 [Shewanella sp. MR-4]
Length = 364
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 168/361 (46%), Gaps = 76/361 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N + N DF +L YP + FV + G ID+ D +A + L LL H
Sbjct: 49 EKKRLHPRNLHI-NGYDFPVLMVSYPKLKAFVRPTPYGDLSIDFADPSAVKTLNAALLQH 107
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+GL +W IP G LCP +P R +Y+H++ DLL + ++ DIGTGAN +Y
Sbjct: 108 HYGLAFWDIPKGALCPPIPGRVDYLHYLADLLFEG---GKVKRAAAIRALDIGTGANGVY 164
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
+LG + W FV SD+ +L NV+ R +DN+ PS+Q L+ +
Sbjct: 165 AILGHQVYDWQFVASDINPQSLT----NVQ-----------RIIDNN---PSLQGHLSLR 206
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
QD+ V G+++ ++F+ +CNPP
Sbjct: 207 RQQDDKA---------------------------------VFKGIIQASDRFELTLCNPP 233
Query: 251 FFESMEEA---------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDS 290
F S++EA G PK + GG E+ C GGE+ F+ +I +S
Sbjct: 234 FHGSLKEASQGSLRKVRNLQLNRGEQPKATSATLNFGGQAAELWCQGGEKQFLATMIRES 293
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
A + W+TS+V ++ NLK L K+GV VKT E QG LAWSF A++
Sbjct: 294 QAFAEQCLWFTSLVSKQENLKPCYQALEKLGVDTVKTIEMQQGNKITRLLAWSFHSQAKR 353
Query: 351 I 351
+
Sbjct: 354 L 354
>gi|304395811|ref|ZP_07377694.1| rRNA (adenine-N(6)-)-methyltransferase [Pantoea sp. aB]
gi|304357105|gb|EFM21469.1| rRNA (adenine-N(6)-)-methyltransferase [Pantoea sp. aB]
Length = 310
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 169/355 (47%), Gaps = 77/355 (21%)
Query: 17 HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLN 76
H +N++ + DFA L + +P + V + G +D+ D A L + L+ + ++
Sbjct: 11 HARNRH-QGEYDFAALTAAHPPLKAKVRPNGYGVKSVDFADPEAVMLLNQALIKLFYDID 69
Query: 77 WWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
W + G LCP VP R++Y+H++ DLL+ + +IP D+G GANCIYPL+
Sbjct: 70 WQLSPGSLCPPVPGRADYLHYLADLLALDNNGVIPMADI-------LDVGCGANCIYPLI 122
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
GA+ GW F G+++ D A++ A + V +NP ++ I +R+ NS++
Sbjct: 123 GAAEYGWRFTGTEIDDAAIKAANRIVAANPRLTRQIRLRRQKNSDA-------------- 168
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
VL GVV E F +CNPPF
Sbjct: 169 -------------------------------------VLAGVVSKTEFFSAVMCNPPFHA 191
Query: 254 SMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
S +EA GL+ + GG E+ GGE+AFI ++I +SVAL + W+
Sbjct: 192 SPDEAVAGSQRKVRNLGLDKSAPLNFGGQHNELWYPGGEKAFIGKMIAESVALGRQIGWF 251
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP--PARKIIS 353
TS+V RK NL L +L+ + V V+ QGQ LAWSF+P P K++S
Sbjct: 252 TSLVSRKENLPALEKQLQALDVAEVRVVNMAQGQKQSRFLAWSFMPAAPRSKLLS 306
>gi|386315779|ref|YP_006011944.1| rRNA (adenine-N(6)-)-methyltransferase [Shewanella putrefaciens
200]
gi|319428404|gb|ADV56478.1| rRNA (adenine-N(6)-)-methyltransferase [Shewanella putrefaciens
200]
Length = 357
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 164/366 (44%), Gaps = 75/366 (20%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
R E + +HP+N + N DF L +P FV + G ID+ D A + L
Sbjct: 39 RSIAEIKKALHPRNVHI-NGYDFNALIKAFPRLNAFVRPTSFGGLSIDFADPEAVKTLNT 97
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG 125
LL H +G+++W IP G LCP +P R +Y+H++ DLL+ D+V DIGTG
Sbjct: 98 ALLKHHYGIDFWDIPKGALCPPIPGRVDYLHYLADLLAEGDHHLVM---DRVSVLDIGTG 154
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
AN IYP+LG + GW FV SD+ ++L + + NP
Sbjct: 155 ANGIYPILGCQVYGWHFVASDINSISLANVQGIIAQNP---------------------- 192
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
++ N+ + G DE A + GV++ E+F+
Sbjct: 193 -----ALHGRLNLRLQG--DESA----------------------IFKGVIQPQERFELT 223
Query: 246 ICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFITRI 286
+CNPPF S+ EA LN K + GG E+ C GGE+ F+ +
Sbjct: 224 LCNPPFHASLAEAAEGSLRKVRNLQLNRGRTAKPVAKLNFGGQGAELWCQGGEQQFLATM 283
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
I++S A W+TS+V +K NLK L K+ V VKT E QG LAWSF
Sbjct: 284 IDESQAFADQCLWFTSLVSKKENLKPCYQALAKLAVDTVKTIEMQQGNKMTRILAWSFQS 343
Query: 347 PARKII 352
A++ I
Sbjct: 344 AAKRKI 349
>gi|117918585|ref|YP_867777.1| putative SAM-dependent methyltransferase [Shewanella sp. ANA-3]
gi|205829611|sp|A0KRF2.1|RLMF_SHESA RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|117610917|gb|ABK46371.1| protein of unknown function DUF890 [Shewanella sp. ANA-3]
Length = 364
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 171/371 (46%), Gaps = 78/371 (21%)
Query: 3 SKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATR 62
+ K + + E+ +HP+N + N DF L + +P + FV + G ID+ D A +
Sbjct: 40 ASKLKAKHGEQKRLHPRNLHI-NGYDFPALMASFPKLKAFVRPTPYGALSIDFADPFAVK 98
Query: 63 ELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFD 121
L LL H +GL +W IP G LCP +P R +Y+H++ DLL + + D
Sbjct: 99 NLNAALLKHHYGLAFWDIPKGALCPPIPGRVDYLHYLADLLFEG---AKVKRAAAIHALD 155
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK-VDNSEST 180
IGTGAN +Y +LG + W FV SD+ NP LI +++ +DN+
Sbjct: 156 IGTGANGVYAILGHQVYDWQFVASDI--------------NPQ--SLINVQRIIDNN--- 196
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
PS+Q L+ + QD+ V G+++ +
Sbjct: 197 PSLQGHLSLRRQQDDK---------------------------------AVFKGIIQASD 223
Query: 241 QFDFCICNPPFFESMEEA---------------GLNPKTSC-----GGTPEEMVCSGGER 280
+F+ +CNPPF S++EA G PK + GG E+ C GGE+
Sbjct: 224 RFELTLCNPPFHGSLKEASEGSLRKVRNLQLNRGEQPKATSATLNFGGQAAELWCQGGEK 283
Query: 281 AFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340
F+ +I +S A + W+TS+V ++ NLK L K+GV VKT E QG L
Sbjct: 284 QFLATMIRESQAFAEQCLWFTSLVSKQENLKPCYQALEKLGVDTVKTIEMQQGNKVTRVL 343
Query: 341 AWSFVPPARKI 351
AWSF A+++
Sbjct: 344 AWSFHSQAKRL 354
>gi|402843603|ref|ZP_10891997.1| 23S rRNA (adenine(2085)-N(6))-dimethyltransferase [Klebsiella sp.
OBRC7]
gi|423102066|ref|ZP_17089768.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5242]
gi|376389962|gb|EHT02649.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5242]
gi|402276713|gb|EJU25814.1| 23S rRNA (adenine(2085)-N(6))-dimethyltransferase [Klebsiella sp.
OBRC7]
Length = 304
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 164/357 (45%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + F+ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHQQRY-DLPALCQAHPELQGFITLNPVGEQTIDFANPLAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S IP + DIG GA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLALDSGTIPANASI------LDIGVGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+G GW F GS++ A A+ V NP ++ I +R+ ++++
Sbjct: 115 NCIYPLIGVHEYGWRFTGSEVNAEAFASAQAIVNGNPGLTRQIRLRRQKDAKA------- 167
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L G++ E +D +
Sbjct: 168 --------------------------------------------ILTGIIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S A GL ++ + GG +E+ C GGE AFIT++I++S
Sbjct: 184 CNPPFHDSAASAQAGGERKRRNLGLGEESVLNFGGQQQELWCEGGEVAFITQMIQESQQF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L VG V E QG +AW+F+ A++
Sbjct: 244 GRQVKWFTSLVSRGDNLPPLYRALTDVGALKVVKKEMAQGNKQSRFIAWTFMDEAKR 300
>gi|373951526|ref|ZP_09611487.1| Ribosomal RNA large subunit methyltransferase F [Shewanella baltica
OS183]
gi|386322653|ref|YP_006018770.1| Ribosomal RNA large subunit methyltransferase F [Shewanella baltica
BA175]
gi|333816798|gb|AEG09464.1| Ribosomal RNA large subunit methyltransferase F [Shewanella baltica
BA175]
gi|373888126|gb|EHQ17018.1| Ribosomal RNA large subunit methyltransferase F [Shewanella baltica
OS183]
Length = 365
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 164/366 (44%), Gaps = 75/366 (20%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K R R E + +HP+N + N DF L + +P + FV + G ID+ D A + L
Sbjct: 45 KDRPRVEIKKALHPRNAHL-NGYDFPALIAAFPRLKTFVRPTPYGALSIDFADPLAVKTL 103
Query: 65 TRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LL H + + W IP+G LCP +P R +Y+H++ DLL+ S DK + DIG
Sbjct: 104 NAALLKHHYRIGSWDIPEGALCPPIPGRVDYVHYVADLLAEG---DKSCAMDKARVLDIG 160
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP+LG + GW +V SD+ N+ S ++
Sbjct: 161 TGANGIYPILGCQVYGWQYVASDI----------------------------NAHSLTNV 192
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
Q + E N + G + +P + F G+++ E+F+
Sbjct: 193 QSII-------EQNPALKGRVSLRLQPDDKAVFK----------------GIIQAEERFE 229
Query: 244 FCICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFIT 284
+CNPPF SM EA LN PK + GG E+ C GGER F+
Sbjct: 230 LTLCNPPFHASMAEASEGTKRKVNNLQLNRGSSVKAAPKLNFGGQAAELWCQGGERQFLA 289
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I +S W+TS+V ++ NLK L ++ V VKT E QG LAWSF
Sbjct: 290 TMIRESRMFADQCLWFTSLVSKQENLKPCYQALAQLNVDTVKTIEMQQGNKITRVLAWSF 349
Query: 345 VPPARK 350
A++
Sbjct: 350 QSAAKR 355
>gi|372276139|ref|ZP_09512175.1| 23S rRNA mA1618 methyltransferase [Pantoea sp. SL1_M5]
gi|390433277|ref|ZP_10221815.1| 23S rRNA mA1618 methyltransferase [Pantoea agglomerans IG1]
Length = 310
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 75/351 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
H +N++ + DFA L + +P + V + G +D+ D A L + L+ + +
Sbjct: 10 FHARNRH-QGEYDFAALTAAHPPLKAKVRPNGYGVQSVDFADPEAVMLLNQALIKLFYDI 68
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
+W + G LCP VP R++Y+H++ DLL+ + +IPT D+G GANCIYPL
Sbjct: 69 DWQLAPGSLCPPVPGRADYLHYLADLLALDNNGVIPTADV-------LDVGCGANCIYPL 121
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+GA+ GW F G+++ + A++ A + V +NP ++ I +R+ NS++
Sbjct: 122 IGAAEYGWRFTGTEVDEAAIKAANRIVAANPRLTRQIRLRRQKNSDA------------- 168
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
VL GVV E F +CNPPF
Sbjct: 169 --------------------------------------VLAGVVSKTEFFSAVMCNPPFH 190
Query: 253 ESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
S EEA GL+ + GG E+ GGE+ FI ++I +SVA + W
Sbjct: 191 ASAEEAVSGSQRKVRNLGLDKSAPLNFGGQHNELWYPGGEKGFIGKMIAESVAFSRQIGW 250
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+TS+V RK NL L +L+ + V ++ QGQ LAWSF+P A++
Sbjct: 251 FTSLVSRKENLPALEKQLQALDVAEMRVVNMAQGQKQSRFLAWSFMPAAQR 301
>gi|397167627|ref|ZP_10491069.1| ribosomal RNA large subunit methyltransferase F [Enterobacter
radicincitans DSM 16656]
gi|396090985|gb|EJI88553.1| ribosomal RNA large subunit methyltransferase F [Enterobacter
radicincitans DSM 16656]
Length = 311
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 160/351 (45%), Gaps = 75/351 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D L PS F+ + G ID+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLDALCVANPSLRDFITANPKGESTIDFAEPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ W IP G L P VP R++Y+H + D+L+ + IP + D+GTGAN
Sbjct: 63 FYGVREWDIPKGFLTPPVPGRADYLHHLADVLAESNEGQIPA------QASVLDVGTGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW F GS++ D AL A+ + +NP +S + +R+
Sbjct: 117 CIYPLIGHHEYGWRFTGSEINDAALTSAQAIISANPGLSRAVRLRR-------------- 162
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ +PS+ +L GV+ EQ+D +C
Sbjct: 163 -------------------QKDPSA------------------ILAGVIHKNEQYDATLC 185
Query: 248 NPPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF +S + A + + GG +E+ C GGE AFI ++I +S
Sbjct: 186 NPPFHDSAQSAQAGSERKRRNLGQAASDAANFGGQQQELWCEGGEVAFICKMIAESQQFA 245
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W+TS+V R NL L L +VG V E QGQ +AW+F+
Sbjct: 246 RQVLWFTSLVSRGDNLPELYRALTQVGAVKVMKKEMAQGQKQSRFIAWTFL 296
>gi|422648632|ref|ZP_16711752.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330962166|gb|EGH62426.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 341
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 171/361 (47%), Gaps = 78/361 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 36 EKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLKA 94
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G VK DIGTGAN
Sbjct: 95 FYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGPSVKALDIGTGAN 150
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLG S GW FVGSD+ A+ A VK+N
Sbjct: 151 CIYPLLGHSDYGWQFVGSDIDTTAVAAATTIVKAN------------------------- 185
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+Q ++ + G+ + +L+G++ E+F +C
Sbjct: 186 ---GLQKAVSVRLQGNRKQ------------------------ILLGLLDSSERFHVSLC 218
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S++EA P + GG +E+ C GGE F+T++I++S
Sbjct: 219 NPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCEGGEIGFVTQLIQES 278
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W++++V + +NL + S L+K G VK E QGQ +AW+F+ A++
Sbjct: 279 AKLPDQVVWFSTLVSKATNLPPIQSALKKAGALEVKIVEMGQGQKQSRFVAWTFLDKAQR 338
Query: 351 I 351
I
Sbjct: 339 I 339
>gi|365959211|ref|YP_004940778.1| 23S rRNA mA1618 methyltransferase [Flavobacterium columnare ATCC
49512]
gi|365735892|gb|AEW84985.1| 23S rRNA mA1618 methyltransferase [Flavobacterium columnare ATCC
49512]
Length = 300
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 174/357 (48%), Gaps = 78/357 (21%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
+ ++ +HP+NK+++N +F+LL S YP + + ++ G ID+T+ +A R L L
Sbjct: 2 KTDKNKGLHPRNKHNQNY-NFSLLISEYPDLKKHINLNKFGSESIDFTNPDAVRSLNSAL 60
Query: 69 LLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFDIGT 124
L + + ++++ +P LCP +P R++YIH+I DLL+ I +PT G +K DIGT
Sbjct: 61 LKYYYQIHFYRLPKTNLCPPIPGRADYIHYIADLLAKGINGTLPT----GSGIKILDIGT 116
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP+LG + GW+FVG+++ A AEK ++ N +
Sbjct: 117 GANCIYPILGNKIYGWTFVGTEIDKPAKLTAEKIIEEN-------------------ELT 157
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+S+T + + + N +L +++ E+FD
Sbjct: 158 KSITLRLQESKRN---------------------------------ILKNIIQPSERFDC 184
Query: 245 CICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIE 288
ICNPPF S EEA P + GG E+ C GGE+AFIT I
Sbjct: 185 VICNPPFHNSREEATKSTLRKLHNLGKKVESSKPILNFGGQNNELWCEGGEKAFITNFIY 244
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+SV K +W+TS+V +K +LK + L+K+ T + QG LAW F+
Sbjct: 245 ESVHFKSQVKWFTSLVSKKEHLKNFETILKKLKATF-EIIPMEQGNKTTRILAWRFL 300
>gi|444379610|ref|ZP_21178787.1| Ribosomal RNA large subunit methyltransferase F [Enterovibrio sp.
AK16]
gi|443676339|gb|ELT83043.1| Ribosomal RNA large subunit methyltransferase F [Enterovibrio sp.
AK16]
Length = 336
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 168/376 (44%), Gaps = 90/376 (23%)
Query: 3 SKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATR 62
+K + + + +HP+N + DF L P + FV + G +D+++ A +
Sbjct: 2 TKPNKTTSQPKKGLHPRNPHRARY-DFPALMKGTPELKAFVKKNPFGDLSVDFSNPQAVK 60
Query: 63 ELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVK 118
L + LL H + +++W IP+G LCP +P R++Y+H++ +LL+ IP G VK
Sbjct: 61 TLNKALLQHFYQISFWDIPEGYLCPPIPGRADYLHYLANLLAESNGGEIP----KGKAVK 116
Query: 119 GFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
G DIG GANC+YP++G + GW FVG+D+ V+++ A+ V+ NP + I+ R N +
Sbjct: 117 GLDIGMGANCVYPMVGHRVYGWQFVGADIDPVSVKSAKLMVEMNPSLKGGIQCRLQKNPD 176
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
+ G++
Sbjct: 177 H---------------------------------------------------IFAGMINA 185
Query: 239 GEQFDFCICNPPFFESMEEAGL------------------------------NPKTSCGG 268
E+FDF +CNPPF SM EA P + GG
Sbjct: 186 KERFDFTMCNPPFHASMAEATKGSERKVKNLAANARKKGSEPFKAQPMKGKGKPVLNFGG 245
Query: 269 TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328
E+ C GGE AFI R+IE S K W+T+MV +K NL + +L+ + V V+T
Sbjct: 246 QNAELWCPGGEAAFIKRMIEQSADFKTQCLWFTTMVSKKENLPGIYKQLKALKVEDVRTI 305
Query: 329 EFVQGQTCRWGLAWSF 344
E QGQ +AW+F
Sbjct: 306 EMAQGQKVTRIVAWTF 321
>gi|424664101|ref|ZP_18101138.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis HMW 616]
gi|404576137|gb|EKA80877.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis HMW 616]
Length = 302
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 163/352 (46%), Gaps = 71/352 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +NK++ DF+ L YP + FV + G ID+ + A + L + LL+
Sbjct: 3 ERNELHKRNKHN-GQYDFSRLMEEYPPLKKFVAPNAYGTTSIDFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS-SNIIPT--TSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++YIH+I DL+ N I T ++ + DIG GAN
Sbjct: 62 CYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPENPIQTEAATKATHPCRCLDIGVGAN 121
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYP++G + GW+FVGSD+ ++++ A K V NP ++ IE+R +S
Sbjct: 122 CIYPIIGQTEYGWTFVGSDIDPISIDNARKIVTCNPALAHKIELRLQRDSRK-------- 173
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ G++ E FD IC
Sbjct: 174 -------------------------------------------IFEGIIAPDEYFDVTIC 190
Query: 248 NPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S EEA + + GG E+ C GGE F+ +IE+S
Sbjct: 191 NPPFHSSREEAEDGTLRKLSSLKGRKITKARLNFGGNANELWCEGGELRFLLTMIEESRN 250
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++ W+TS+V ++ NL L +KL+ VG++ K E QG LAW F
Sbjct: 251 YRKNCEWFTSLVSKEKNLSKLTAKLKSVGISEHKIIEMHQGSKTSRILAWRF 302
>gi|423128246|ref|ZP_17115925.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5250]
gi|376393602|gb|EHT06258.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
10-5250]
Length = 304
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 164/357 (45%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + F+ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHQQRY-DLPALCQAHPELQGFITLNPVGEQTIDFANPLAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S IP + DIG GA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLALDSGTIPANASI------LDIGVGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+G GW F GS++ A A+ V NP ++ I +R+ ++++
Sbjct: 115 NCIYPLIGVHEYGWRFTGSEVNAEAFASAQAIVNGNPGLTRQIRLRRQKDAKA------- 167
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L G++ E +D +
Sbjct: 168 --------------------------------------------ILSGIIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S A GL ++ + GG +E+ C GGE AFIT++I++S
Sbjct: 184 CNPPFHDSAASAQAGGERKRRNLGLGEESVPNFGGQQQELWCEGGEVAFITQMIKESQQF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L VG V E QG +AW+F+ A++
Sbjct: 244 GRQVKWFTSLVSRGDNLPPLYRALTDVGAVKVVKKEMAQGNKQSRFIAWTFMDEAKR 300
>gi|423278103|ref|ZP_17257017.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis HMW 610]
gi|404586113|gb|EKA90686.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis HMW 610]
Length = 345
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 165/355 (46%), Gaps = 71/355 (20%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
R ER +H +NK++ DF+ L YP + FV + G ID+ + A + L + L
Sbjct: 43 RMTERNELHKRNKHN-GQYDFSRLMEEYPPLKKFVAPNAYGTTSIDFFNPQAVKALNKAL 101
Query: 69 LLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS-SNIIPT--TSRNGDKVKGFDIGT 124
L+ +G+ +W IP LCP +P R++YIH+I DL+ N I T ++ + DIG
Sbjct: 102 LISCYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPENPIQTEAATKATHPCRCLDIGV 161
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVGSD+ ++++ A K V NP ++ IE+R +S+
Sbjct: 162 GANCIYPIIGQTEYGWTFVGSDIDPISIDNARKIVTCNPALAHKIELRLQRDSQK----- 216
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 217 ----------------------------------------------IFEGIIAPDEYFDV 230
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
ICNPPF S EEA + + GG E+ C GGE F+ +IE+
Sbjct: 231 TICNPPFHSSREEAENGTLRKLSSLKGRKITKARLNFGGNANELWCEGGELRFLLTMIEE 290
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL L +KL+ VG++ K E QG LAW F
Sbjct: 291 SRNYRKNCGWFTSLVSKEKNLGKLTAKLKSVGISEHKIIEMHQGSKTSRILAWRF 345
>gi|309786530|ref|ZP_07681153.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|308925593|gb|EFP71077.1| conserved hypothetical protein [Shigella dysenteriae 1617]
Length = 308
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 158/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R+++IH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADHIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN ++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------SIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QMMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|375259815|ref|YP_005018985.1| 23S rRNA mA1618 methyltransferase [Klebsiella oxytoca KCTC 1686]
gi|397656878|ref|YP_006497580.1| ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
E718]
gi|365909293|gb|AEX04746.1| 23S rRNA mA1618 methyltransferase [Klebsiella oxytoca KCTC 1686]
gi|394345409|gb|AFN31530.1| Ribosomal RNA large subunit methyltransferase F [Klebsiella oxytoca
E718]
Length = 304
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 163/357 (45%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + F+ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHQQRY-DLPALCQAHPELQGFITLNPVGEQTIDFANPLAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S IP + DIG GA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLALDSGTIPANASI------LDIGVGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+G GW F GS++ A A+ V NP ++ I +R+ ++++
Sbjct: 115 NCIYPLIGVHEYGWRFTGSEVNADAFASAQAIVNGNPGLTRQIRLRRQKDAKA------- 167
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L G++ E +D +
Sbjct: 168 --------------------------------------------ILTGIIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S A GL ++ + GG +E+ C GGE AFIT++I +S
Sbjct: 184 CNPPFHDSAASAQAGGERKRRNLGLGEESVLNFGGQQQELWCEGGEVAFITQMIAESQQF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L VG V E QG +AW+F+ A++
Sbjct: 244 GRQVKWFTSLVSRGDNLPPLYRALTDVGAVKVVKKEMAQGNKQSRFIAWTFMDEAKR 300
>gi|313674939|ref|YP_004052935.1| 23S rRNA m(6)a-1618 methyltransferase [Marivirga tractuosa DSM
4126]
gi|312941637|gb|ADR20827.1| 23S rRNA m(6)A-1618 methyltransferase [Marivirga tractuosa DSM
4126]
Length = 309
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 159/358 (44%), Gaps = 80/358 (22%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ ++HP + +++ D LA P E FVF ++ ID+ D A + L + LLL
Sbjct: 5 QKSSLHPNSPFNKRY-DLESLAKTLPELEAFVFTNQYDSQTIDFADPKAVKALNKALLLQ 63
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG-----FDIGTG 125
+ L +W IP+G LCP +P R++Y+ I++ L T R G +VKG DIGTG
Sbjct: 64 HYDLKYWDIPEGYLCPPIPGRADYLFQIDEFL------TKKRKGVEVKGDLIRCLDIGTG 117
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
A+CIYP+LG+ GW+FV S++ A AEK + NP + +EIRK
Sbjct: 118 ASCIYPILGSQQFGWNFVASEIDPKAAASAEKIITENPKLEGKVEIRK------------ 165
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
Y + G+V+ E +D
Sbjct: 166 ---------------------------------------QYKSSDIFKGIVKKHEYYDVS 186
Query: 246 ICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
ICNPPF S EEA P + GG E+ GGE FIT +
Sbjct: 187 ICNPPFHSSAEEAEKGTTRKLKNLKKFRKDKKPTLNFGGKSNELWTEGGELKFITNMAVQ 246
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347
S + RW+T++V + SNLK + +++ G ++T E G +AW+F+ P
Sbjct: 247 SKYHSHSVRWFTTLVSKSSNLKRIYDAIKQAGAKEIETIEMNHGNKTSRIVAWTFLHP 304
>gi|425172608|ref|ZP_18570997.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA504]
gi|425340523|ref|ZP_18727748.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1848]
gi|408101066|gb|EKH33535.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
FDA504]
gi|408268924|gb|EKI89246.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
EC1848]
Length = 301
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 157/346 (45%), Gaps = 74/346 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ D A L + P + F+ + G +D+ + A + L + LL H + +
Sbjct: 1 MHPRNRHHSRY-DLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAV 59
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANCIYPL
Sbjct: 60 ANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANCIYPL 113
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 114 IGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR------------------- 154
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ S + FN G++ EQ+D +CNPPF
Sbjct: 155 ----------------QKESGAIFN----------------GIIHKNEQYDATLCNPPFH 182
Query: 253 ESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
+S A GLN + GG +E+ C GGE FI ++IE+S + W
Sbjct: 183 DSAAAARAGSECKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAKQVMW 242
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+TS+V R NL L L VG V E QGQ +AW+F+
Sbjct: 243 FTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 288
>gi|90406856|ref|ZP_01215048.1| hypothetical protein PCNPT3_12473 [Psychromonas sp. CNPT3]
gi|90312093|gb|EAS40186.1| hypothetical protein PCNPT3_12473 [Psychromonas sp. CNPT3]
Length = 299
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 170/350 (48%), Gaps = 71/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP++ + DF L + P+ FV + G ID+++ +A L + LL
Sbjct: 4 KPLLHPRSLH-HGRYDFDALCACLPALSEFVICNEHGIVTIDFSNPDAILTLNQALLKFF 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ +++W IP G LCP +P R++YIH++ DLLSS+ T + + +VK DIG GANCIYP
Sbjct: 63 YHIDFWQIPKGYLCPPIPGRADYIHYLADLLSSST--TLNVHSAQVKVLDIGCGANCIYP 120
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG+ + WSFVG D+ +A++ A +KSN +++ I+ R
Sbjct: 121 LLGSQIYNWSFVGVDIDTLAIKIANLLIKSNKVLNKKIKTR------------------- 161
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ S FN G+++ ++F +CNPPF
Sbjct: 162 ----------------LQKQPKSIFN----------------GIIQPQDKFTLSMCNPPF 189
Query: 252 FESMEEA---------GLNP-------KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
SME+A LN K + G E+ C+GGE AF+ +++ +SV Q
Sbjct: 190 HASMEKALAGSTRKVNNLNKGKTNVPVKLNFAGQETELCCAGGEIAFLKQMVTESVQYAQ 249
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V + N+ L L+++ V V+ + QGQ +AWSFV
Sbjct: 250 QVLWFTSLVSKSENIAPLKKLLKQLNVPKVQVIKMQQGQKISRFIAWSFV 299
>gi|444352442|ref|YP_007388586.1| Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.187)
[Enterobacter aerogenes EA1509E]
gi|443903272|emb|CCG31046.1| Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.187)
[Enterobacter aerogenes EA1509E]
Length = 304
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 162/357 (45%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ E+P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAEKPGLHPRNRHHQRY-DLPALCQTHPELQSYITLNPVGEQTIDFANPLAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++YIH + DLL+ S IP + DIGTGA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAQDSGEIPKNATI------LDIGTGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+G GW F GS++ A A+ + NP ++ I +R+
Sbjct: 115 NCIYPLIGVHEYGWRFTGSEVNPQAFASAQAIINGNPGLTRQIRLRR------------- 161
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
Q E G + G++ E +D +
Sbjct: 162 ------QKE--------------------------------GQAIFTGIIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S A G + + GG +E+ C GGE AFI+++I +S
Sbjct: 184 CNPPFHDSAASARAGGERKRRNLGLGEDSVLNFGGQQQELWCEGGEVAFISQMIRESQQF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L +VG V E QGQ +AWSF+ A++
Sbjct: 244 GRQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR 300
>gi|397686245|ref|YP_006523564.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri DSM 10701]
gi|395807801|gb|AFN77206.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri DSM 10701]
Length = 338
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 165/354 (46%), Gaps = 78/354 (22%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N++S DF L + P FV + G+ ID+ + +A R R LL
Sbjct: 18 KPLLHPRNRHSGRY-DFPALVAACPELAAFVIRNPYGKQSIDFANPDAVRVFNRALLKQF 76
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANC 128
+G+ +W IP G LCP +P R++Y+H + DLL+S +IP G ++ D+GTGANC
Sbjct: 77 YGIAHWDIPPGYLCPPIPGRADYLHGLADLLASQNDGVIP----RGASIQALDVGTGANC 132
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F G+D+ VAL A V +N +++ I +R+ +S P
Sbjct: 133 IYPLIGQREYGWHFTGTDIDAVALASARTIVSAN-KLNKAIGLRQ----QSAPQR----- 182
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ GV+ E+FD +CN
Sbjct: 183 ------------------------------------------IFAGVIAPDERFDVTLCN 200
Query: 249 PPFFESMEEAG------------LNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSV 291
PPF S EA L+PK GG E+ C GGE AFI R+ +S
Sbjct: 201 PPFHASQAEASSGSQRKWRNLGKLDPKRKLPVLNFGGQARELWCEGGELAFIQRLATESA 260
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ Q W++++V + N+ L + L ++G + V+ E QGQ +AWSF+
Sbjct: 261 EVAQQVCWFSTLVSKGGNVAPLQALLNRLGASQVQMQEMAQGQKRSRFVAWSFL 314
>gi|339502450|ref|YP_004689870.1| methyltransferase [Roseobacter litoralis Och 149]
gi|338756443|gb|AEI92907.1| putative methyltransferase [Roseobacter litoralis Och 149]
Length = 313
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 160/351 (45%), Gaps = 70/351 (19%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
R + +HP+N++SE DFA L + P E F + G ID+ D +A R L R L
Sbjct: 5 RMATKTKLHPRNQHSEGY-DFARLVAQTPELEAFTTRNPRGETTIDFKDVSAVRMLNRAL 63
Query: 69 LLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
L + + +W IP G LCP +P R +YIH++ DLL+ + R G +K DIGTGA+
Sbjct: 64 LKTHYNIEFWDIPSGYLCPPIPGRVDYIHYLADLLADSNNQDIPR-GPHIKALDIGTGAS 122
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
+YPL G S GWSF G D+ AL+ A + + N + I +R+ DN E+T S
Sbjct: 123 LVYPLTGQSEYGWSFTGVDIDAGALKSARQICEFN---NLKIALRRQDNPENTFS----- 174
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
GV++ + F +C
Sbjct: 175 ----------------------------------------------GVIKAKDAFHLTMC 188
Query: 248 NPPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF S E+A G + + + GG E+ C GGE FI R++E S
Sbjct: 189 NPPFHASKEKASKGTQRKWSNLGKGHSEQRNFGGQNAELWCPGGEIRFIARMVEQSTEFA 248
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
Q W+TS+V +K NL+ L L K V K E QGQ +AW+++
Sbjct: 249 QQCLWFTSLVSKKDNLQPLHRILGKARVADYKVVEMAQGQKTSRFIAWTYI 299
>gi|120600728|ref|YP_965302.1| putative SAM-dependent methyltransferase [Shewanella sp. W3-18-1]
gi|146291239|ref|YP_001181663.1| putative SAM-dependent methyltransferase [Shewanella putrefaciens
CN-32]
gi|205829610|sp|A4Y1N1.1|RLMF_SHEPC RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829613|sp|A1RQ03.1|RLMF_SHESW RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|120560821|gb|ABM26748.1| protein of unknown function DUF890 [Shewanella sp. W3-18-1]
gi|145562929|gb|ABP73864.1| protein of unknown function DUF890 [Shewanella putrefaciens CN-32]
Length = 357
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 163/366 (44%), Gaps = 75/366 (20%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
R E + +HP+N + N DF L +P FV + G ID+ D A + L
Sbjct: 39 RSIAEIKKALHPRNVHI-NGYDFNALIKAFPRLNAFVRPTSFGGLSIDFADPEAVKTLNT 97
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG 125
LL H +G+++W IP G LCP +P R +Y+H++ DLL+ D+V DIGTG
Sbjct: 98 ALLKHHYGIDFWDIPKGALCPPIPGRVDYLHYLADLLAEG---DHHLVMDRVSVLDIGTG 154
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
AN IYP+LG + GW FV SD+ ++L + + NP
Sbjct: 155 ANGIYPILGCQVFGWHFVASDINSISLANVQGIIAQNP---------------------- 192
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
++ N+ + G DE A + GV++ E+F+
Sbjct: 193 -----ALHGRLNLRLQG--DESA----------------------IFKGVIQPQERFELT 223
Query: 246 ICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFITRI 286
+CNPPF S+ EA LN K + GG E+ C GGE F+ +
Sbjct: 224 LCNPPFHASLAEAAEGSLRKVRNLQLNRGRTAKPVAKLNFGGQGAELWCQGGEPQFLATM 283
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
I++S A W+TS+V +K NLK L K+ V VKT E QG LAWSF
Sbjct: 284 IDESQAFADQCLWFTSLVSKKENLKPCYQALAKLAVDTVKTIEMQQGNKMTRILAWSFQS 343
Query: 347 PARKII 352
A++ I
Sbjct: 344 AAKRKI 349
>gi|127514669|ref|YP_001095866.1| putative SAM-dependent methyltransferase [Shewanella loihica PV-4]
gi|205829621|sp|A3QJF9.1|RLMF_SHELP RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|126639964|gb|ABO25607.1| protein of unknown function DUF890 [Shewanella loihica PV-4]
Length = 398
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 167/367 (45%), Gaps = 87/367 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DF L P +PFV + G ID+ D A + L LL +GL
Sbjct: 73 LHPRNLHGQGY-DFDALMDTTPELKPFVRPNPYGNLSIDFADPRAVKLLNLALLRLHYGL 131
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---------IPTTSR--NGDKVKGFDIG 123
++W IP+G LCP +P R +Y+H++ DLL+ + +P +R G++V DIG
Sbjct: 132 SYWDIPEGFLCPPIPGRVDYLHYLADLLAESTPASKGGKRKLPNVTRAPKGERVVALDIG 191
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYPLLG + GW FV SD+ V+L+ E+ + +NP ++ + +R
Sbjct: 192 TGANGIYPLLGHQVYGWRFVASDIDPVSLKNVERIIANNPQLAGKLSLR----------- 240
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+Q +S + G++R ++FD
Sbjct: 241 --------LQSDSKQ--------------------------------IFTGIIRAEDRFD 260
Query: 244 FCICNPPFFESMEEAGL-----------------------NPKTSCGGTPEEMVCSGGER 280
+CNPPF S+ EA K + GG E+ C GGE+
Sbjct: 261 LTLCNPPFHASLAEASRGSERKLKNLAANKRAKGHEVAKSKEKLNFGGQKAELWCEGGEQ 320
Query: 281 AFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340
AF+ ++I +S W+TS+V +K NLK L +VG V+T E QG L
Sbjct: 321 AFLGQMIRESQKFGSQCLWFTSLVSKKENLKPCYRLLEQVGAKRVETLEMAQGNKLTRVL 380
Query: 341 AWSFVPP 347
AW+F+ P
Sbjct: 381 AWTFLTP 387
>gi|308186177|ref|YP_003930308.1| Bifunctional methyltransferase [Pantoea vagans C9-1]
gi|308056687|gb|ADO08859.1| Bifunctional methyltransferase [Pantoea vagans C9-1]
Length = 310
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 164/351 (46%), Gaps = 75/351 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
H +N++ + DFA L + +P V + G +D+ D A L + L+ + +
Sbjct: 10 FHARNRH-QGEYDFAALTAAHPPLAAKVRPNGYGVQSVDFADPEAVMLLNQALIKLFYDI 68
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
+W + G LCP VP R++Y+H++ DL++ + IP DIG GANCIYPL
Sbjct: 69 DWQLAPGSLCPPVPGRADYLHYLADLMALDNNGAIPAADV-------LDIGCGANCIYPL 121
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+GA+ GW F G+++ + A++ A + V +NP ++ I +R+ NS++
Sbjct: 122 IGAAEYGWRFTGTEIDEAAIKAANRIVAANPRLTRQIRLRRQKNSDA------------- 168
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
VL GVV E F +CNPPF
Sbjct: 169 --------------------------------------VLAGVVSKNEFFSAVMCNPPFH 190
Query: 253 ESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
S EEA GL+ + GG E+ GGE+AFI ++I +SVA + W
Sbjct: 191 ASAEEASSGSQRKVRNLGLDKSAPLNFGGQHNELWYPGGEKAFIGKMIAESVAFGRQIGW 250
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+TS+V RK NL L +L+ + V V+ QGQ LAWSF+P A++
Sbjct: 251 FTSLVSRKENLPALEKQLQALDVEEVRVVNMAQGQKQSRFLAWSFMPAAQR 301
>gi|423195798|ref|ZP_17182381.1| ribosomal RNA large subunit methyltransferase F [Aeromonas
hydrophila SSU]
gi|404632599|gb|EKB29201.1| ribosomal RNA large subunit methyltransferase F [Aeromonas
hydrophila SSU]
Length = 314
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 159/356 (44%), Gaps = 75/356 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
+ R + +HP+N++ + P DFA L P +PFVF + G ID+ D A + L +
Sbjct: 2 KTRSDHESGLHPRNRH-QAPYDFAALCLRTPELQPFVFVNPYGASTIDFADPAAVKALNK 60
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIG 123
LL +G+ W +P G LCP +P R +Y+H + DLL S+ +PT G V+ DIG
Sbjct: 61 ALLALHYGIQHWDLPAGYLCPPIPGRVDYLHRVADLLAESAGKVPT----GKGVRVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
GANCIYPLLGA GW FVGSD+ V+++ A SN + IE R
Sbjct: 117 VGANCIYPLLGAREYGWRFVGSDIDPVSVKAASLLANSN-GLGSQIECR----------- 164
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
L G++ + G+V E+F
Sbjct: 165 ---LQGRAGD-------------------------------------IFQGIVAPRERFA 184
Query: 244 FCICNPPFFESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIE 288
+CNPPF S+ EA P + GG E+ C GGE AF+ +I
Sbjct: 185 LTLCNPPFHASLAEASKGTERKLRNLGKEVKDKPVLNFGGQKAELWCEGGEAAFLAAMIN 244
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S A + W++S+V +K NL L +VG V+ E QG LAW+F
Sbjct: 245 QSRAFAEQCLWFSSLVSKKENLPAAKKALTRVGARQVRVLEMAQGNKVSRVLAWTF 300
>gi|346973465|gb|EGY16917.1| DUF890 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 443
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 67/296 (22%)
Query: 60 ATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG 119
A +LT+ LL D+GL +P +LCP VP R NYI W+++L+ + + + G KV G
Sbjct: 58 AVMQLTKTLLKIDYGLKIELPHDRLCPPVPVRHNYILWLKELIDGS---SYAERGRKVTG 114
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTD-VALEWAEKNVKSNPHISELIEIRKVDNSE 178
DIGTGA+CIYPLL WSF+ + D +L +A+KN++ N H+ I++ +
Sbjct: 115 LDIGTGASCIYPLLACQQRNWSFIATGNVDPKSLSFAKKNIELN-HVQHRIQV--ISRQS 171
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
S P I A P++
Sbjct: 172 SDPLI-----------------------PAHPAT-------------------------- 182
Query: 239 GEQFDFCICNPPFFES-------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
DF + NPPF+ES ++ P ++C G EMV GGE AF+TRI+E+S+
Sbjct: 183 ---VDFTMTNPPFYESDADLLASAKQKSRPPLSACTGAAVEMVTPGGEVAFVTRILEESL 239
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP 346
L+ +WYTSM+G++++L+ ++ KLR+ G+ TEFVQG +T RW +AWSF P
Sbjct: 240 TLRDAIQWYTSMLGKQTSLETIVEKLREYGINNYAVTEFVQGNKTRRWAVAWSFAP 295
>gi|395236006|ref|ZP_10414206.1| 23S rRNA mA1618 methyltransferase [Enterobacter sp. Ag1]
gi|394729312|gb|EJF29308.1| 23S rRNA mA1618 methyltransferase [Enterobacter sp. Ag1]
Length = 313
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 166/357 (46%), Gaps = 75/357 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ +P +HP+N++ DFA L + P+ F+ G +D+ + A + L + LL
Sbjct: 6 DTKPGLHPRNRHRSRY-DFAALTASSPALGEFLRPGPHGDTTVDFANPLAVKALNQALLA 64
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IP+G LCP VP R++YIH + DLL+ ++P +V DIG GA
Sbjct: 65 HFYQVKQWDIPEGYLCPPVPGRADYIHHLADLLAEGNGGVVPA------QVSVLDIGVGA 118
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+G GW F GS++ A A++ V NP +S +I +R+ N+
Sbjct: 119 NCIYPLIGQHEYGWRFTGSELDGDAFRSAQQIVDGNPGLSRMIRLRRQKNAGC------- 171
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L G++ E +D +
Sbjct: 172 --------------------------------------------ILDGIIHKNETYDATL 187
Query: 247 CNPPFFESMEEA---------GLNPKTSC----GGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S+E A L S GG +E+ C GGE AF++++I++S A
Sbjct: 188 CNPPFHDSVEAARSGSERKRRNLGQDASAALNFGGREQELWCEGGEVAFVSQMIKESKAF 247
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ W+TS+V + NL L +++ GV V E QGQ +AWSF+ A++
Sbjct: 248 GRQVLWFTSLVSKGENLPALYRVMQENGVVKVVKKEMAQGQKQSRFIAWSFMDDAQR 304
>gi|398847951|ref|ZP_10604818.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM84]
gi|398250737|gb|EJN36040.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM84]
Length = 316
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 160/351 (45%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 3 QKPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKA 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP +P R++YIH DLL+ + R G ++ DIG GANCIY
Sbjct: 62 QYGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGEVPR-GAQISALDIGVGANCIY 120
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG S W FVGSD+ VAL A+ V++N + + I +R+
Sbjct: 121 PLLGHSDYRWRFVGSDIDPVALASAKAIVQAN-GLVKGIALRQ----------------- 162
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
Q + +SG + + E+FD +CNPP
Sbjct: 163 --QGDRKHILSGLLQAD--------------------------------ERFDLTLCNPP 188
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F S EEA P + GG E+ C GGE F+T++I +SV
Sbjct: 189 FHASREEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVTQLIGESVQY 248
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
Q W+TS+V + SNL + + L K GV + E QGQ +AWSF
Sbjct: 249 AQQVLWFTSLVSKVSNLPGIEAALSKAGVKARRIVEMGQGQKQSRMIAWSF 299
>gi|390945072|ref|YP_006408833.1| putative SAM-dependent methyltransferase [Belliella baltica DSM
15883]
gi|390418500|gb|AFL86078.1| putative SAM-dependent methyltransferase [Belliella baltica DSM
15883]
Length = 306
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 160/348 (45%), Gaps = 70/348 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +HP+NK+ E DF L P+ FV ++ G ID+ D A L + LL H
Sbjct: 12 KSVLHPRNKHRERY-DFETLTESLPALRNFVLINKYGDETIDFFDPKAVLMLNKALLKHF 70
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + NW IP+ LCP +P R++YIH+I DLLS + ++ + K DIG GANCIYP
Sbjct: 71 YKIDNWDIPENYLCPPIPGRADYIHYIADLLSDS--DKNGKSQKQTKCLDIGVGANCIYP 128
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++GA GWSFVGSD+ A++ A+K + +N + + +R N ++
Sbjct: 129 IIGAMEYGWSFVGSDIDPEAIDAAQKTINNNSALKSNVFLRLQTNKKN------------ 176
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
G++++GE +D ICNPPF
Sbjct: 177 ---------------------------------------FFTGIIQEGEFYDVSICNPPF 197
Query: 252 FESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
S +EA + + GG E+ GGE F+ +I +S +
Sbjct: 198 HASAKEAQASSLRKLSNLKGQKVTKATLNFGGQSNELWYEGGELKFLNDMIYESRRFGKQ 257
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
RW+TS+V +++NL F+ L V I+KT E QG +AWSF
Sbjct: 258 CRWFTSLVSKEANLPFVYKTLDAVQPKIIKTIEMGQGNKISRIVAWSF 305
>gi|32564931|ref|NP_499247.2| Protein METT-10, isoform a [Caenorhabditis elegans]
gi|29840843|sp|Q09357.2|MET16_CAEEL RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|24817627|emb|CAA87421.2| Protein METT-10, isoform a [Caenorhabditis elegans]
Length = 479
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 162/352 (46%), Gaps = 78/352 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y PPDF LA YP F F Y +G+ D+ A R LT+ LL D L
Sbjct: 7 MHPRNPYRNKPPDFKALAVEYPEFRKFCQYVSNGKVTFDFKKDAAVRCLTQTLLKKDFNL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP G L P VP + NY I+DLL +N + ++N V G DIGTG +CI+ L+GA
Sbjct: 67 DVEIPPGHLVPRVPQKLNYCLLIDDLLKANKL---TKN---VIGIDIGTGTSCIHALIGA 120
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
W F+ +D + ++ A +NV N S + + P ++ L
Sbjct: 121 RQFNWKFIATDGDEKSVRVAHENVAKNGLSSSICVV------HVNPDVKTVL-------- 166
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES- 254
MD +V + D + + FC+CNPPFFE
Sbjct: 167 --MD--------------------------------VVNTIPDTD-YAFCMCNPPFFEKG 191
Query: 255 ---------------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
E P ++ + E+ GGE AF+ RII+DSV L
Sbjct: 192 NGDDKFCEDISSSTETYSNRVASEFRTAPHSATFASSAELFVDGGEVAFVNRIIDDSVLL 251
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTI-VKTTEFVQGQTCRWGLAWSF 344
+ + YT+M+GRKS+LK L ++L++ G + + + QG+T RW LAW+F
Sbjct: 252 RDRIKIYTTMIGRKSSLKPLQNRLQRFGDDVKIMISVLNQGKTKRWMLAWTF 303
>gi|89073726|ref|ZP_01160240.1| hypothetical SAM-dependent methyltransferase [Photobacterium sp.
SKA34]
gi|89050501|gb|EAR55993.1| hypothetical SAM-dependent methyltransferase [Photobacterium sp.
SKA34]
Length = 339
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 166/379 (43%), Gaps = 95/379 (25%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
+++ + + +HP+N + E DFA L P + V + G I+++D A + L
Sbjct: 3 QKKNAQPKQGLHPRNPHRERY-DFATLIKATPELDQHVSENAFGDLSINFSDPLAVKTLN 61
Query: 66 RVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFD 121
+ LL H + + W IP G LCP +P R++Y+H+I DLL+ + IP G V+G D
Sbjct: 62 KALLKHFYQVEHWDIPAGFLCPPIPGRADYLHFIADLLAQSNEGEIP----QGKGVRGLD 117
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
IG GANC+YP++G + GW FVGS++ +A++ A+ +NP + I+IR N+++
Sbjct: 118 IGIGANCVYPIIGHRVYGWQFVGSEIDTLAVKSAKFIAGNNPRLKGAIQIRLQKNADN-- 175
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
+ ++ D E
Sbjct: 176 -------------------------------------------------IFTDMINDEEV 186
Query: 242 FDFCICNPPFFESMEEA-----------------------------------GLNPKTSC 266
FDF ICNPPF S EEA P +
Sbjct: 187 FDFTICNPPFHSSEEEAMAGSERKIRNLAANANKKQKARSRGNVSPAFNNAKSTTPVLNF 246
Query: 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326
GG E+ C GGE FI ++I S W+T++V +K NL L +L KVG VK
Sbjct: 247 GGQKAELWCKGGEAGFIKKMINQSATKATQCFWFTTLVSKKENLGVLYKQLEKVGAVSVK 306
Query: 327 TTEFVQGQTCRWGLAWSFV 345
T E QGQ +AW+F+
Sbjct: 307 TIEMSQGQKISRLIAWTFL 325
>gi|114561238|ref|YP_748751.1| putative SAM-dependent methyltransferase [Shewanella frigidimarina
NCIMB 400]
gi|122301187|sp|Q08A02.1|RLMF_SHEFN RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|114332531|gb|ABI69913.1| protein of unknown function DUF890 [Shewanella frigidimarina NCIMB
400]
Length = 360
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 155/364 (42%), Gaps = 85/364 (23%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
+HP+N + + DFA L P+ FV + G P ID+ D A + L LLL ++
Sbjct: 42 ALHPRNAHLQGY-DFATLIIAMPALAAFVRPNPYGNPSIDFADPKAVKSLNAALLLSEYH 100
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+N W IP+G LCP VP R +Y+H+I DLL+ + G ++G DIGTGAN IYPLL
Sbjct: 101 INGWDIPEGYLCPPVPGRVDYLHYIADLLA---VKGKVVKGASIRGLDIGTGANGIYPLL 157
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G GW FV SD+ V+++ K + N I+ +++R
Sbjct: 158 GIQTYGWQFVASDIDPVSIDNVAKIAQQNEKITAHLQLR--------------------- 196
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+P F ++ E+FD +CNPPF
Sbjct: 197 --------------LQPQPEHIFK----------------NIIAADERFDVTLCNPPFHS 226
Query: 254 SMEEAG-----------------------------LNPKTSCGGTPEEMVCSGGERAFIT 284
S+ EA P + GG E+ C GGE+ F+
Sbjct: 227 SLAEASEGSLRKVKNLAKNQQQKHGQQSRKLAVSQAKPTLNFGGQKAELWCQGGEQQFLA 286
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I+ S W+TS+V + NLK L+++ VKT E QG LAWSF
Sbjct: 287 NMIKQSRDYANQVLWFTSLVSKSDNLKPCYQLLKQLNAVEVKTIEMTQGNKATRILAWSF 346
Query: 345 VPPA 348
+ PA
Sbjct: 347 LTPA 350
>gi|440759083|ref|ZP_20938236.1| Ribosomal RNA large subunit methyltransferase F [Pantoea
agglomerans 299R]
gi|436427099|gb|ELP24783.1| Ribosomal RNA large subunit methyltransferase F [Pantoea
agglomerans 299R]
Length = 310
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 77/355 (21%)
Query: 17 HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLN 76
H +N++ + DFA L + +P + V + G +D+ D A L + L+ + ++
Sbjct: 11 HARNRH-QGEYDFAALTAAHPPLKAKVRPNGYGVKSVDFADPEAVMLLNQALIKLFYDID 69
Query: 77 WWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
W + G LCP VP R++Y+H++ DLL+ + +IP D+G GANCIYPL+
Sbjct: 70 WQLSPGSLCPPVPGRADYLHYLADLLALDNNGVIPMADI-------LDVGCGANCIYPLI 122
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
GA+ GW F G+++ D A++ A + V +NP ++ I +R+ N+++
Sbjct: 123 GAAEYGWRFTGTEIDDAAIKAANRIVAANPRLTRQIRLRRQKNNDA-------------- 168
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
VL GVV E F +CNPPF
Sbjct: 169 -------------------------------------VLAGVVSKTEFFSAVMCNPPFHA 191
Query: 254 SMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
S +EA GL+ + GG E+ GGE+AFI ++I +SVAL + W+
Sbjct: 192 SPDEAVAGSQRKVRNLGLDKSAPLNFGGQHNELWYPGGEKAFIGKMIVESVALGRQIGWF 251
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP--PARKIIS 353
TS+V RK NL L +L+ + V V+ QGQ LAWSF+P P K++S
Sbjct: 252 TSLVSRKENLPALEKQLQALDVAEVRVVNMAQGQKQSRFLAWSFMPAAPRSKLLS 306
>gi|59714336|ref|YP_207111.1| SAM-dependent methyltransferase [Vibrio fischeri ES114]
gi|75352388|sp|Q5DYC3.1|RLMF_VIBF1 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|59482584|gb|AAW88223.1| predicted SAM-dependent methyltransferase [Vibrio fischeri ES114]
Length = 319
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 164/361 (45%), Gaps = 86/361 (23%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ ++HP+NK++ N DF L +PFV ++ G I+++D A + L + LL H
Sbjct: 10 KKSLHPRNKHTGNY-DFPALIKACAELKPFVETNQYGNESINFSDPQAVKALNKALLAHF 68
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + +W IP G LCP +P R++YIH I DLL+ IPT G KVKG D+G GANC
Sbjct: 69 YNVPFWDIPQGYLCPPIPGRADYIHNIADLLAITNEGTIPT----GKKVKGLDVGVGANC 124
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+Y ++G WSFVGSD+ +++ A +NP + IE R N E+
Sbjct: 125 VYLIIGNREYQWSFVGSDIDPQSIKMASFIANNNPSLKG-IECRLQKNEEN--------- 174
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G+++ E FDF +CN
Sbjct: 175 ------------------------------------------IFKGIIKPTEFFDFTMCN 192
Query: 249 PPFFESMEEAGL------------------------NPKT-SCGGTPEEMVCSGGERAFI 283
PPF S EA N K + GG E+ C GGE AFI
Sbjct: 193 PPFHASEAEATAGTERKQKNLAANKAKKGHAFQEMQNAKALNFGGQKAELWCEGGELAFI 252
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
++ + S +W+T+++ +K N+ L +L K+GV +KT E QGQ +AW+
Sbjct: 253 LKMAQQSREFSLQVQWFTTLISKKENVAELYKELEKIGVKTIKTIEMAQGQKISRFVAWT 312
Query: 344 F 344
+
Sbjct: 313 Y 313
>gi|300175984|emb|CBK22201.2| unnamed protein product [Blastocystis hominis]
Length = 449
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 180/402 (44%), Gaps = 85/402 (21%)
Query: 14 PTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDH 73
P++HP N Y N P+F L+ +P + +V ++DG W + NAT+ LT+ LL D
Sbjct: 14 PSMHPDNPYFNNAPNFLELSKDFPYLKDYVGQNKDGSVYYRWKEKNATKMLTKALLKRDF 73
Query: 74 GLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR-NGDKVKGFDIGTGANCIYPL 132
G+ W +PD L P + R NY+ WI ++L ++ P + K G DIGTGA+ IYPL
Sbjct: 74 GIEWDMPDSHLAPGITGRVNYLCWIHEIL--HLHPDFQDCDTSKTIGIDIGTGASAIYPL 131
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
LG SL WSF+ +D+ V++ ++ + N H++E I I + + +
Sbjct: 132 LGHSLYNWSFIATDIDPVSIASSQSIINQN-HLNEFITIHQRSSDQ-------------- 176
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
P+L +V++ +Q FC+CNPPFF
Sbjct: 177 -------------------------------------PLLKDLVKE-QQVTFCMCNPPFF 198
Query: 253 ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKF 312
S EE NP + T E + GGE FI RI+++S+ L+ Y+S+VG+K+ LK
Sbjct: 199 ASSEEMKQNPYVNTELTHNESITLGGEETFIRRILDESLDLQTKISLYSSLVGKKTTLKR 258
Query: 313 LISKLRKVGVTIVKTTEFVQ----------------GQTCRWGLAWSF---------VPP 347
++ LR+ V + + Q RW + WSF P
Sbjct: 259 ILRVLRERKVPSIGSVVLSQKSLDDSHDDSKSGEKLKNIVRWCVFWSFDERFSAIFNAPG 318
Query: 348 AR-KIISPHVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSA 388
A+ K+ KK E +++ V Q IE F A
Sbjct: 319 AKFKVFGKRKEAKKRFDICFEVKEKEPV---VWQRIEEFCKA 357
>gi|327349168|gb|EGE78025.1| DUF890 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 461
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 168/333 (50%), Gaps = 71/333 (21%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DFA LA +P+F + + ++D+TD +A +ELT+ LL D L+ +P +LCP
Sbjct: 13 DFAALALQFPNFSKHLKQNN----QLDFTDPDAVQELTKSLLKRDFDLHLDLPSDRLCPP 68
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGD------KVKGFDIGTGANCIYPLLGASLL-GW 140
VPNR NYI W++DLL S T+ + D V G DIGTGA+CIYP LG L W
Sbjct: 69 VPNRFNYILWLQDLLDS----TSEKYSDGYDQERDVFGLDIGTGASCIYPQLGCVLRPKW 124
Query: 141 SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDM 200
F +D+ + L++A NV+ N S I+ V++S ST I
Sbjct: 125 KFAATDIDEKNLKYARDNVQRNKLDS---RIQIVESSPSTALI----------------- 164
Query: 201 SGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE--- 257
P G +G+ + DF +CNPPF+ES +E
Sbjct: 165 ------------------PLGE----------IGLPESNARLDFTMCNPPFYESRDELIS 196
Query: 258 ----AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
P ++C G EM+ +GGE AF+ R+I +SV L++ +WYTSMVG+ S++ L
Sbjct: 197 AAKAKQRPPFSACTGAEVEMITAGGEVAFVARMIRESVKLRERVQWYTSMVGKFSSVATL 256
Query: 314 ISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFV 345
++ L + G EFVQG +T RW + WS++
Sbjct: 257 LNILHEEGNKNWAVAEFVQGSKTRRWAIGWSWM 289
>gi|422017901|ref|ZP_16364460.1| 23S rRNA mA1618 methyltransferase [Providencia alcalifaciens Dmel2]
gi|414105026|gb|EKT66589.1| 23S rRNA mA1618 methyltransferase [Providencia alcalifaciens Dmel2]
Length = 336
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 170/358 (47%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ EPFV + G +D+ D A +
Sbjct: 17 EKKKTFLQQKSGLHPRNRHRSRY-DFPALIASCPALEPFVKPNAWGDISVDFADPAAVKM 75
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ +W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 76 LNRALLQHFYGIEYWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKGVAILDV 134
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+ A+ V+ NP + + +R
Sbjct: 135 GVGANCIYPIIGLREYGWRFTGSEINPVSFNTAKMIVEMNPILRNGVRLR---------- 184
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + ++G ++GV E+F
Sbjct: 185 ---------LQKQPEFILNG-----------------------------IIGV---AEKF 203
Query: 243 DFCICNPPFFESMEEAGLN----------------PKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA + P + GG E+ C GGE AF+ ++
Sbjct: 204 DATLCNPPFHSSQQEAQASTRRKLHKLGKGEVADTPVQNFGGKNNELWCEGGEEAFVRKM 263
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+E+SV+L Q W+TS++ + + L + L VG V+T E QGQ +AW+F
Sbjct: 264 VEESVSLAQNCLWFTSLISKNTTLPSIYHALNLVGAVEVRTIEMAQGQKISRFVAWTF 321
>gi|160873258|ref|YP_001552574.1| putative SAM-dependent methyltransferase [Shewanella baltica OS195]
gi|378706494|ref|YP_005271388.1| rRNA (adenine-N(6)-)-methyltransferase [Shewanella baltica OS678]
gi|205829619|sp|A9KVB0.1|RLMF_SHEB9 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|160858780|gb|ABX47314.1| protein of unknown function DUF890 [Shewanella baltica OS195]
gi|315265483|gb|ADT92336.1| rRNA (adenine-N(6)-)-methyltransferase [Shewanella baltica OS678]
Length = 365
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 164/366 (44%), Gaps = 75/366 (20%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K + R E + +HP+N + N DF L S +P + FV + G +++ D A + L
Sbjct: 45 KDKPRAEIKKALHPRNAHL-NGYDFPALISAFPRLKTFVRPTPYGALSVNFADPLAVKTL 103
Query: 65 TRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LL H +G+ W IP+G LCP +P R +Y+H++ DLL+ S DK + DIG
Sbjct: 104 NAALLKHHYGIGSWNIPEGALCPPIPGRVDYVHYVADLLAEG---DKSCAMDKARVLDIG 160
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP+LG + GW +V SD+ N+ S ++
Sbjct: 161 TGANGIYPILGCQVYGWQYVASDI----------------------------NAHSLANV 192
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
Q + E N + G + +P + F G+++ E+F+
Sbjct: 193 QSII-------EQNPVLQGRISLRLQPDDKAVFK----------------GIIQAEERFE 229
Query: 244 FCICNPPFFESMEEAG-----------LN--------PKTSCGGTPEEMVCSGGERAFIT 284
+CNPPF SM EA LN PK + GG E+ C GGE F+
Sbjct: 230 LTLCNPPFHASMAEASEGTKRKVNNLQLNRGSSVKAAPKLNFGGQAAELWCQGGEGQFLA 289
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I +S W+TS+V ++ NLK L ++ V VKT E QG LAWSF
Sbjct: 290 TMIRESQMFADQCLWFTSLVSKQENLKPCYQALAQLNVDTVKTIEMQQGNKITRVLAWSF 349
Query: 345 VPPARK 350
A++
Sbjct: 350 QSAAKR 355
>gi|363582692|ref|ZP_09315502.1| 23S rRNA mA1618 methyltransferase [Flavobacteriaceae bacterium
HQM9]
Length = 307
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 164/358 (45%), Gaps = 75/358 (20%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
++ + ++ +HP+NK+ E DF +L + P+ + FV ++ G ID+++ + L
Sbjct: 4 KKPKTNKKANLHPRNKHIERY-DFDVLTTALPALKEFVRPNQYGDLSIDFSNPTGVKALN 62
Query: 66 RVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFD 121
LL H + +N+W IP+G LC +P R++YIH+I DLL+ +N IP G+K D
Sbjct: 63 SALLKHYYNINFWDIPEGHLCSPIPGRADYIHYIADLLAEHHNNEIPK----GEKTICLD 118
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
IG GANC+YP++G S GWSF+GSD+++VAL A+ V NP + + +++R N S
Sbjct: 119 IGVGANCVYPIIGNSEYGWSFIGSDISEVALASAKNIVSKNPQLKDKVDLRLQGNPNS-- 176
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
+ ++ D E
Sbjct: 177 -------------------------------------------------IFRDILADDEH 187
Query: 242 FDFCICNPPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRI 286
ICNPPF S E A NP+ + GG E+ C GGE FI I
Sbjct: 188 ITVSICNPPFHASAEAALSSNFRKLKNLTGKEIENPELNFGGQHNELWCDGGELKFIKNI 247
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
I S K W++S+V +K N++ L L++ K QG +AW+F
Sbjct: 248 IFQSRNYKNNCTWFSSLVSKKENIRPLKKALKEAEAASFKVIPMGQGNKVSRIIAWTF 305
>gi|423283724|ref|ZP_17262608.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis HMW 615]
gi|404580762|gb|EKA85470.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis HMW 615]
Length = 305
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 162/355 (45%), Gaps = 74/355 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +N+++ DF+ L YP + F+ + G ID+ + A + L + LL+
Sbjct: 3 ERNELHKRNRHN-GQYDFSRLTEEYPPLKKFIVLNAYGTTSIDFFNPRAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI------IPTTSRNGDKVKGFDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ +I + T N + + DIG
Sbjct: 62 YYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPDISDESTGLKTAVPNTRQYRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVGSD+ V+++ A K V NP ++ IE+R +S
Sbjct: 122 GANCIYPIIGQTEYGWTFVGSDIDPVSIDNARKIVTCNPALAHKIELRLQRDSRK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFEGIIAPNEYFDA 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+CNPPF S EEA + + GG E+ C GGE F+ +IE+
Sbjct: 191 TLCNPPFHSSKEEAEDGTLRKLSSLKGKKVTKARLNFGGNANELWCEGGELRFLLTMIEE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL LI+KL+ + + E QG LAW F
Sbjct: 251 SRNYRKNCGWFTSLVSKEKNLGKLIAKLKSTDIAEHRIIEMHQGTKTSRILAWRF 305
>gi|265766180|ref|ZP_06094221.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
2_1_16]
gi|336411791|ref|ZP_08592251.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
2_1_56FAA]
gi|423250685|ref|ZP_17231700.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL03T00C08]
gi|423254011|ref|ZP_17234941.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL03T12C07]
gi|263253848|gb|EEZ25313.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
2_1_16]
gi|335940135|gb|EGN02003.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
2_1_56FAA]
gi|392651642|gb|EIY45304.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL03T00C08]
gi|392654569|gb|EIY48216.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL03T12C07]
Length = 305
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 161/355 (45%), Gaps = 74/355 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +N+++ DF+ L YP + F+ + G ID+ + A + L + LL+
Sbjct: 3 ERNELHKRNRHN-GQYDFSRLTEEYPPLKKFIVLNAYGTTSIDFFNPRAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI------IPTTSRNGDKVKGFDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ +I + T N + + DIG
Sbjct: 62 YYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPDISNESTGLKTAVPNARQYRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVGSD+ V+++ A K V NP ++ IE+R +S
Sbjct: 122 GANCIYPIIGQTEYGWTFVGSDIDPVSIDNARKIVTCNPALAHKIELRLQQDSRK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFEGIIAPNEYFDV 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+CNPPF S EEA + + GG E+ C GGE F+ +IE+
Sbjct: 191 TLCNPPFHSSKEEAEDGTLRKLSSLKGQKVTKARLNFGGNANELWCEGGELRFLLTMIEE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL L +KL+ + + E QG LAW F
Sbjct: 251 SRNYRKNCGWFTSLVSKEKNLGKLTAKLKSTDIAEHRIIEMHQGTKTSRILAWRF 305
>gi|399027182|ref|ZP_10728773.1| putative SAM-dependent methyltransferase [Flavobacterium sp. CF136]
gi|398075418|gb|EJL66536.1| putative SAM-dependent methyltransferase [Flavobacterium sp. CF136]
Length = 316
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 169/360 (46%), Gaps = 77/360 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N + DF LL S P + V + G ID++D A + L + LL
Sbjct: 8 EKNNLHPRNLHRSRY-DFELLISNCPELKKHVAVNLHGVETIDFSDPKAVKSLNKALLQT 66
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGAN 127
+ + +W IP LCP +P R++YIH++ DLL+ + +IP G V G DIG GAN
Sbjct: 67 YYDIQDWDIPVNYLCPPIPGRADYIHYLADLLAETNNGVIP----EGSSVLGLDIGAGAN 122
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYP+LG ++ WSFVG+D+ + A+E K +++NP + + I +++
Sbjct: 123 CIYPILGNAIYDWSFVGTDIDEKAIENCSKIIEANPKLIDAISLQQ-------------- 168
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
Q ES + ++ ++F F IC
Sbjct: 169 -----QTESRF--------------------------------IFKNIITPEDRFTFTIC 191
Query: 248 NPPFFESMEEA---------GLNPK--------TSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S E+A LNPK + GG E+ C GGE F+T++I +S
Sbjct: 192 NPPFHASAEDANQSTVRKVSNLNPKEKKKTNPVLNFGGHNAELWCDGGEIGFVTQMIYES 251
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T++V ++ NL + L KV VKT + QGQ +AW+F+ A++
Sbjct: 252 AKYPMQCLWFTTLVSKRDNLSSIYKTLNKVNAASVKTIDMAQGQKNSRIVAWTFLTEAQQ 311
>gi|429332251|ref|ZP_19212981.1| 23S rRNA mA1618 methyltransferase [Pseudomonas putida CSV86]
gi|428763082|gb|EKX85267.1| 23S rRNA mA1618 methyltransferase [Pseudomonas putida CSV86]
Length = 313
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 161/350 (46%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P++HP+N++ + DF L P F + G+P ID+ D A R R LL
Sbjct: 3 KPSLHPRNRH-QGRYDFPQLIKSSPELARFTITNPHGKPSIDFADPEAVRVFNRALLKAQ 61
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ +W IP LCP +P R++Y+H + DLL+ R G +++ DIG GANCIYP
Sbjct: 62 YGIQFWDIPADYLCPPIPGRADYLHALADLLAEENAGEIPR-GAQIQVLDIGVGANCIYP 120
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG + W F GSD+ VAL A+ V++N + + I +R+ N +
Sbjct: 121 LLGNADYRWRFAGSDIDPVALASAKAIVQAN-GLGKFISLRQQGNRKH------------ 167
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L G++ E+FD +CNPPF
Sbjct: 168 ---------------------------------------ILSGLLAADERFDLTLCNPPF 188
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S EEA P + GG E+ C GGE F+T+++++S AL
Sbjct: 189 HASREEATRGSQRKWRALGKADPKRKLPVLNFGGQNNELWCEGGEIRFVTQLVQESKALG 248
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
Q W++S+V + SNL + + L+K G + E QGQ +AW+F
Sbjct: 249 QQVLWFSSLVSKASNLPGIEAALKKAGAVEQRVMEMGQGQKQSRLVAWTF 298
>gi|423271135|ref|ZP_17250106.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL05T00C42]
gi|423274959|ref|ZP_17253905.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL05T12C13]
gi|392699059|gb|EIY92241.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL05T00C42]
gi|392704238|gb|EIY97377.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL05T12C13]
Length = 305
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 161/355 (45%), Gaps = 74/355 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +N+++ DF+ L YP + F+ S G ID+ + A + L + LL+
Sbjct: 3 ERNELHKRNRHN-GQYDFSRLTEEYPPLKKFIVLSAYGTTSIDFFNPRAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI------IPTTSRNGDKVKGFDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ +I + T N + + DIG
Sbjct: 62 YYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPDISDESTGLKTAVPNTRQYRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVGSD+ V+++ A K V NP ++ IE+R +S
Sbjct: 122 GANCIYPIIGQTEYGWTFVGSDIDPVSIDNARKIVTCNPALAHKIELRLQRDSRK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFEGIIAPNEYFDV 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+CNPPF S EEA + + GG E+ C GGE F+ +IE+
Sbjct: 191 TLCNPPFHSSKEEAEDGTLRKLSSLKGKKVTKARLNFGGNANELWCEGGELRFLLTMIEE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL L +KL+ + + E QG LAW F
Sbjct: 251 SRNYRKNCGWFTSLVSKEKNLGKLTAKLKSTDIAEHRIIEMHQGTKTSRILAWRF 305
>gi|410862488|ref|YP_006977722.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii AltDE1]
gi|410819750|gb|AFV86367.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii AltDE1]
Length = 324
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 163/376 (43%), Gaps = 99/376 (26%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + P AL S YP+ +PF+ ++ G+ ID+T+ NA + L LL H + L
Sbjct: 1 MHPRNLHKNGYPMDALCQS-YPALKPFLVRAKSGKTSIDFTNPNAVKALNAALLFHYYKL 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W +P+G LCP+VP R++YIH I DLL + + G V+G D+G GAN IYP++G
Sbjct: 60 EYWDMPEGYLCPSVPGRADYIHGIADLLYQSDEKRDAVRGLAVRGLDVGVGANAIYPIIG 119
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ W FVGSD+ A++ A + N ++ +RK +S
Sbjct: 120 VASYDWEFVGSDVDGQAVKSATRIASKNKRLTNKFSVRKQADSAH--------------- 164
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G+++D E F F +CNPPF +S
Sbjct: 165 ------------------------------------IFEGIIKDNEHFTFTMCNPPFHKS 188
Query: 255 MEEA--GLNPKTS--------------------------------------------CGG 268
E+A G + KTS G
Sbjct: 189 AEDALLGTHRKTSNLARNKHKRGGKLPAKSPKGFAHSAKSKGHNKVTENVAKQANLNFAG 248
Query: 269 TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328
E+ C GGE AFI R+I++SV +K W+T +V + ++LK L + + G +
Sbjct: 249 QANELWCEGGELAFIQRMIKESVNVKDNVEWFTCLVSKSAHLKPLKTSINYYGARECEVI 308
Query: 329 EFVQGQTCRWGLAWSF 344
+ QG +AWSF
Sbjct: 309 DMGQGSKVSRFIAWSF 324
>gi|411010204|ref|ZP_11386533.1| 23S rRNA mA1618 methyltransferase [Aeromonas aquariorum AAK1]
Length = 304
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 157/347 (45%), Gaps = 75/347 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL-LHDHG 74
+HP+N++ + P DFA L P +PFVF + G ID+ D A + L + LL LH
Sbjct: 1 MHPRNRH-QAPYDFAALCLRTPELQPFVFVNLYGASTIDFADPAAVKALNKALLALHYGI 59
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
L+W +P G LCP +P R +Y+H + DLL S+ +PT G V+ D+G GANCIYPL
Sbjct: 60 LHWDLPAGYLCPPIPGRVDYLHRVADLLAESAGKVPT----GKGVRVLDVGVGANCIYPL 115
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
LGA GW FVGSD+ V+++ A SN + IE R L G++
Sbjct: 116 LGAREYGWRFVGSDIDPVSVKAASLLANSN-GLGSQIECR--------------LQGRAG 160
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ G+V E+F +CNPPF
Sbjct: 161 D-------------------------------------IFQGIVAPRERFALTLCNPPFH 183
Query: 253 ESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
S+ EA P + GG E+ C GGE AF+ +I S A +
Sbjct: 184 ASLAEASKGTERKLRNLGKEVKDKPVLNFGGQKAELWCEGGEAAFLAAMINQSRAFAEQC 243
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++S+V +K NL L +VG V+ E QG LAW+F
Sbjct: 244 LWFSSLVSKKENLPAAKKALTRVGARQVRVLEMAQGNKVSRVLAWTF 290
>gi|283784567|ref|YP_003364432.1| hypothetical protein ROD_08081 [Citrobacter rodentium ICC168]
gi|282948021|emb|CBG87585.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
Length = 336
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 158/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D L P ++ + G +D+ A R L + LL H
Sbjct: 6 QKPGLHPRNRHHSRY-DLPALCKGTPELSQYLIRTPAGEQSVDFASPQAVRALNKALLAH 64
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+G+ NW IPDG LCP VP R++YIH + DLL+ + +PT + DIG GANC
Sbjct: 65 FYGVANWDIPDGFLCPPVPGRADYIHHLADLLAETAGSVPTNA------SILDIGVGANC 118
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+ + TP
Sbjct: 119 IYPLIGVHEYGWRFTGSETNEQALASAQAIISANPGLTRAIRLRR----QKTP------- 167
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
++ FN G++ EQ+D +CN
Sbjct: 168 ------------------------AAIFN----------------GIIHKNEQYDATLCN 187
Query: 249 PPFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A + + GG +E+ C GGE AFI +I +S A +
Sbjct: 188 PPFHDSAASARAGSERKRRNLGQDKDEALNFGGQQQELWCEGGEVAFIKTMIAESRAFGR 247
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L +G V E QGQ +AW+F+
Sbjct: 248 QVMWFTTLVSRGENLPPLYRALTDIGAVKVVKKEMAQGQKQSRFIAWTFM 297
>gi|91791466|ref|YP_561117.1| SAM-dependent methyltransferase [Shewanella denitrificans OS217]
gi|122969099|sp|Q12T32.1|RLMF_SHEDO RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|91713468|gb|ABE53394.1| protein of unknown function DUF890 [Shewanella denitrificans OS217]
Length = 360
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 160/357 (44%), Gaps = 83/357 (23%)
Query: 15 TIHPKN--KYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+HP+N KY DFA L+ P+ PFV + G ID+ + +A ++L LLLH
Sbjct: 45 ALHPRNVHKYGY---DFAALSKTLPALTPFVGPNAYGNISIDFANPDAVKQLNAALLLHH 101
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + +W IP G LCP +P R +Y+H++ DLLS+ P + ++ DIGTGAN IYP
Sbjct: 102 YSIRDWDIPHGYLCPPIPGRVDYLHYLADLLSA---PHKGKANRNIRALDIGTGANGIYP 158
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG W FV SD+ V+L+ ++ + NP ++ + +R N ++
Sbjct: 159 LLGIESYSWQFVASDIDKVSLDNVDEILAKNPQLAAKLSLRLQLNPKAI----------- 207
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
FN GV+ E FD +CNPPF
Sbjct: 208 ------------------------FN----------------GVIEKDEYFDVSLCNPPF 227
Query: 252 FESMEE--AGLNPKTS---------------------CGGTPEEMVCSGGERAFITRIIE 288
S+ + AG K S GG E+ C GGE AF+ +I
Sbjct: 228 HRSLADANAGTQRKLSNLAKNRGQSQQQAVQAKVALNFGGQKAELWCEGGEAAFLANMIS 287
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S W+TS+V + NLK ++L K G + VKT E QG LAWS++
Sbjct: 288 ESKGFAAQCLWFTSLVSKSENLKPCYAQLAKQGTSEVKTIEMHQGNKITRILAWSYL 344
>gi|365969652|ref|YP_004951214.1| ribosomal RNA large subunit methyltransferase F [Enterobacter
cloacae EcWSU1]
gi|365748565|gb|AEW72792.1| Ribosomal RNA large subunit methyltransferase F [Enterobacter
cloacae EcWSU1]
Length = 303
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 164/355 (46%), Gaps = 83/355 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ N D L PS + ++ + G +++ D A + L + LL H
Sbjct: 4 QKPGLHPRNRH-RNRYDMNALCQSCPSLQDYIVQTPAGESSVNFADPQAVKMLNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNG---DKVKGFDIGTGAN 127
+G+ +W IP+G LCP VP R++Y+H + DLL+ + RNG ++ DIGTGAN
Sbjct: 63 YYGVAHWDIPEGFLCPPVPGRADYLHHLADLLADD------RNGVIPEQASVLDIGTGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPL+G W F GS++ + A A+ + +NP +S + +R+
Sbjct: 117 LIYPLIGVHEYHWRFTGSEIGNEAFSSAQAIINANPGLSRSVRLRR-------------- 162
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ ++S FN G++ E +D +C
Sbjct: 163 ---------------------QKDAASIFN----------------GIIHKNESYDATLC 185
Query: 248 NPPFFES-----------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF +S E+A LN GG +E+ C GGE AFI R+IE+S
Sbjct: 186 NPPFHDSAATARAGSERKRRNLGQAEDAALN----FGGQQQELWCEGGEVAFILRMIEES 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ +W+T++V R NL L L VG V E QGQ +AWSF+
Sbjct: 242 KVFGRQVKWFTTLVSRGDNLPPLYRALTDVGAVNVVKKEMAQGQKQSRFIAWSFM 296
>gi|410616356|ref|ZP_11327348.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola polaris LMG
21857]
gi|410164065|dbj|GAC31486.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola polaris LMG
21857]
Length = 296
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 84/342 (24%)
Query: 32 LASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPN 90
L YP+ + + + G+ I++ +A + L LL++ +G+ W IPDG LCP VP
Sbjct: 4 LCQAYPALKRHLVNANSGKLSINFAHPDAVKALNAALLIYYYGMTVWDIPDGYLCPPVPG 63
Query: 91 RSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147
R++YIH I DLL+S+ IPT G +V+G D+G GAN IYP++G+ GWSFVGSD+
Sbjct: 64 RADYIHGIADLLASDYAGNIPT----GKEVRGLDVGIGANVIYPIIGSHSYGWSFVGSDI 119
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
+++ A + NP ++ L+ +RK +NS
Sbjct: 120 DAASVKSANTLARLNPRLAPLLSVRKQNNSAY---------------------------- 151
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSC- 266
+ G++++ E F F +CNPPF +S E+A L +
Sbjct: 152 -----------------------IFKGIIKENEYFAFSMCNPPFHKSPEDAALGSQRKTI 188
Query: 267 ------------------------GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
GT E+ C GGE AFI R+I SV K+ +W+T
Sbjct: 189 GLKNNRLKRTSKNQSHSALAPLNFSGTGNELWCEGGELAFIQRMISQSVEYKRQVKWFTC 248
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+V + ++LK + + ++ G + QGQ +AW+F
Sbjct: 249 LVSKSAHLKAIKTSIKYYGAAKFVKVDMGQGQKQSRFVAWTF 290
>gi|298384418|ref|ZP_06993978.1| methyltransferase [Bacteroides sp. 1_1_14]
gi|298262697|gb|EFI05561.1| methyltransferase [Bacteroides sp. 1_1_14]
Length = 307
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 163/356 (45%), Gaps = 74/356 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +NK++ DF+LL YP FV + G ID+ + +A + L + LL+
Sbjct: 3 ERSELHTRNKHN-GQYDFSLLTENYPPLRKFVLLNPLGIQTIDFFNPHAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS--RNGDKVK----GFDIGT 124
+G+ +W IP LCP +P R++Y+H+I DL+ + T+ NGDK K DIG
Sbjct: 62 YYGIRYWDIPRNYLCPPIPGRADYVHYIADLIDPERVSNTANEENGDKPKRQCRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G GW FVGSD+ V++E A K V NP ++ I++R
Sbjct: 122 GANCIYPIIGHVEYGWMFVGSDIDPVSIENARKIVTCNPVLAHKIDLR------------ 169
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+Q ++ G ++ E FD
Sbjct: 170 -------LQKDNRRIFDG--------------------------------IIAPDEYFDV 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
ICNPPF S EEA K + GG E+ C GGE F+ +I +
Sbjct: 191 TICNPPFHSSKEEAEEGTLRKLSSLKGEKVKKTKLNFGGNANELWCEGGELHFLLNMISE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
S ++ W+TS+V ++ NL L +KL+ V V+ K QG LAW F+
Sbjct: 251 SRKYRKNCGWFTSLVSKEKNLDKLYAKLKAVHVSEYKIIRMCQGTKNSRILAWRFL 306
>gi|90577737|ref|ZP_01233548.1| hypothetical SAM-dependent methyltransferase [Photobacterium
angustum S14]
gi|90440823|gb|EAS66003.1| hypothetical SAM-dependent methyltransferase [Photobacterium
angustum S14]
Length = 340
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 166/380 (43%), Gaps = 96/380 (25%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
+++ + + +HP+N + DFA L P + V + G ++++D A + L
Sbjct: 3 QKKNAQPKQGLHPRNPHRARY-DFATLIKATPELDQHVSENAYGDLSVNFSDPLAVKTLN 61
Query: 66 RVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFD 121
+ LL H + ++ W IP G LCP +P R++Y+H+I DLL+ + IP G ++G D
Sbjct: 62 KALLKHFYQVDHWDIPAGFLCPPIPGRADYLHYIADLLAQSNEGAIP----QGKGIRGLD 117
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
IG GANC+YP++G + GW FVGS++ +A++ A+ +NP + I+IR N+++
Sbjct: 118 IGIGANCVYPIIGHRVYGWQFVGSEIDPLAVKSAKFIAGNNPRLKGAIQIRLQKNADN-- 175
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
+ ++ D E
Sbjct: 176 -------------------------------------------------IFTDMINDEEV 186
Query: 242 FDFCICNPPFFESMEEA------------------------------------GLNPKTS 265
FDF +CNPPF S EEA P +
Sbjct: 187 FDFTLCNPPFHSSEEEAMAGSERKVRNLAANANKKQQARSRGKVSPAFSNAKSSTTPVLN 246
Query: 266 CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIV 325
GG E+ C GGE FI ++I S WYT++V +K NL L +L KVG V
Sbjct: 247 FGGQKAELWCKGGEVGFIKKMINQSAIKATQCFWYTTLVSKKENLGVLYKQLEKVGAVSV 306
Query: 326 KTTEFVQGQTCRWGLAWSFV 345
KT E QGQ +AW+F+
Sbjct: 307 KTIEMSQGQKLSRLIAWTFL 326
>gi|45442121|ref|NP_993660.1| SAM-dependent methyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|51596872|ref|YP_071063.1| SAM-dependent methyltransferase [Yersinia pseudotuberculosis IP
32953]
gi|153946932|ref|YP_001400469.1| SAM-dependent methyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|229895252|ref|ZP_04510426.1| putative ribosomal RNA small subunit methyltransferase J [Yersinia
pestis Pestoides A]
gi|81639070|sp|Q669D4.1|RLMF_YERPS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829617|sp|A7FGU1.1|RLMF_YERP3 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829722|sp|B1JH95.2|RLMF_YERPY RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|205829724|sp|B2K7Y6.2|RLMF_YERPB RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|45436984|gb|AAS62537.1| Predicted SAM-dependent methyltransferases [Yersinia pestis biovar
Microtus str. 91001]
gi|51590154|emb|CAH21791.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|152958427|gb|ABS45888.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
31758]
gi|229701738|gb|EEO89763.1| putative ribosomal RNA small subunit methyltransferase J [Yersinia
pestis Pestoides A]
Length = 336
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 169/369 (45%), Gaps = 78/369 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G +D+ D A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 83 HFYGIEYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIP----KGKNIALLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLK-------------- 184
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
++ +P + + GV E++D +
Sbjct: 185 -------------------QQKDPHA------------------IFEGVWAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
VA Q W+TS++ +K+ L + LR V V+T E QGQ +AW+F+ P ++
Sbjct: 268 VAKAQNCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSRFVAWTFLTPEQQ 327
Query: 351 IISPHVAEK 359
+ VAE+
Sbjct: 328 --AAWVAER 334
>gi|283833899|ref|ZP_06353640.1| putative methyltransferase YbiN [Citrobacter youngae ATCC 29220]
gi|291070570|gb|EFE08679.1| putative methyltransferase YbiN [Citrobacter youngae ATCC 29220]
Length = 308
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N+++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHNGRY-DLATLCQVTPELTQFLTLTPGGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IP+G LCP VP R++YIH + DLL ++ IP + D+G GANC
Sbjct: 63 FYAVKNWDIPEGFLCPPVPGRADYIHHLADLLGETTGTIPANA------SVLDVGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+GA GW F GS+ + A A+ V +NP ++ I +R+
Sbjct: 117 IYPLIGAHEYGWRFTGSETSSEAFNSAQAIVNANPGLTRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ ++S FN G++ EQ++ +CN
Sbjct: 162 --------------------QKDAASIFN----------------GIIHKNEQYEATVCN 185
Query: 249 PPFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A + + GG +E+ C GGE AFI ++I +S A +
Sbjct: 186 PPFHDSAASARAGSERKRRNLGQDKDDALNFGGQQQELWCEGGEVAFIKKMIAESQAFGR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVMWFTTLVSRGENLPPLYHALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|22125563|ref|NP_668986.1| SAM-dependent methyltransferase [Yersinia pestis KIM10+]
gi|108808006|ref|YP_651922.1| putative SAM-dependent methyltransferase [Yersinia pestis Antiqua]
gi|108812276|ref|YP_648043.1| putative SAM-dependent methyltransferase [Yersinia pestis Nepal516]
gi|149365573|ref|ZP_01887608.1| hypothetical protein YPE_0741 [Yersinia pestis CA88-4125]
gi|165925488|ref|ZP_02221320.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937575|ref|ZP_02226137.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008220|ref|ZP_02229118.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213774|ref|ZP_02239809.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398574|ref|ZP_02304098.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422340|ref|ZP_02314093.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424712|ref|ZP_02316465.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470569|ref|ZP_02335273.1| putative SAM-dependent methyltransferase [Yersinia pestis FV-1]
gi|218929607|ref|YP_002347482.1| SAM-dependent methyltransferase [Yersinia pestis CO92]
gi|229838054|ref|ZP_04458213.1| putative ribosomal RNA small subunit methyltransferase J [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229898614|ref|ZP_04513759.1| putative ribosomal RNA small subunit methyltransferase J [Yersinia
pestis biovar Orientalis str. India 195]
gi|229902613|ref|ZP_04517730.1| putative ribosomal RNA small subunit methyltransferase J [Yersinia
pestis Nepal516]
gi|294504337|ref|YP_003568399.1| hypothetical protein YPZ3_2227 [Yersinia pestis Z176003]
gi|384123078|ref|YP_005505698.1| hypothetical protein YPD4_2488 [Yersinia pestis D106004]
gi|384126639|ref|YP_005509253.1| hypothetical protein YPD8_2183 [Yersinia pestis D182038]
gi|384139654|ref|YP_005522356.1| 23S rRNA mA1618 methyltransferase [Yersinia pestis A1122]
gi|384414146|ref|YP_005623508.1| putative ribosomal RNA small subunitmethyltransferase J [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420547474|ref|ZP_15045364.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-01]
gi|420552807|ref|ZP_15050127.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-02]
gi|420558362|ref|ZP_15054991.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-03]
gi|420563823|ref|ZP_15059851.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-04]
gi|420568861|ref|ZP_15064425.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-05]
gi|420574515|ref|ZP_15069545.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-06]
gi|420579831|ref|ZP_15074372.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-07]
gi|420585170|ref|ZP_15079213.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-08]
gi|420595700|ref|ZP_15088685.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-10]
gi|420601338|ref|ZP_15093709.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-11]
gi|420606767|ref|ZP_15098601.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-12]
gi|420612173|ref|ZP_15103462.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-13]
gi|420617540|ref|ZP_15108165.1| methyltransferase small domain protein [Yersinia pestis PY-14]
gi|420622845|ref|ZP_15112911.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-15]
gi|420627940|ref|ZP_15117534.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-16]
gi|420633049|ref|ZP_15122127.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-19]
gi|420643777|ref|ZP_15131823.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-29]
gi|420649005|ref|ZP_15136566.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-32]
gi|420654656|ref|ZP_15141644.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-34]
gi|420665454|ref|ZP_15151331.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-42]
gi|420675678|ref|ZP_15160633.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-46]
gi|420681284|ref|ZP_15165705.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-47]
gi|420686584|ref|ZP_15170431.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-48]
gi|420691786|ref|ZP_15175007.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-52]
gi|420697574|ref|ZP_15180088.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-53]
gi|420703269|ref|ZP_15184714.1| methyltransferase small domain protein [Yersinia pestis PY-54]
gi|420708811|ref|ZP_15189499.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-55]
gi|420714239|ref|ZP_15194343.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-56]
gi|420719724|ref|ZP_15199084.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-58]
gi|420725226|ref|ZP_15203885.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-59]
gi|420730819|ref|ZP_15208901.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-60]
gi|420735853|ref|ZP_15213449.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-61]
gi|420741326|ref|ZP_15218370.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-63]
gi|420746939|ref|ZP_15223167.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-64]
gi|420752483|ref|ZP_15228055.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-65]
gi|420758095|ref|ZP_15232667.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-66]
gi|420768726|ref|ZP_15242007.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-72]
gi|420773727|ref|ZP_15246520.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-76]
gi|420779304|ref|ZP_15251449.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-88]
gi|420784897|ref|ZP_15256343.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-89]
gi|420790100|ref|ZP_15260992.1| methyltransferase small domain protein [Yersinia pestis PY-90]
gi|420795604|ref|ZP_15265947.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-91]
gi|420800658|ref|ZP_15270485.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-92]
gi|420806047|ref|ZP_15275355.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-93]
gi|420811358|ref|ZP_15280143.1| methyltransferase small domain protein [Yersinia pestis PY-94]
gi|420816923|ref|ZP_15285154.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-95]
gi|420822216|ref|ZP_15289914.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-96]
gi|420827303|ref|ZP_15294476.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-98]
gi|420837864|ref|ZP_15304022.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-100]
gi|420843040|ref|ZP_15308717.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-101]
gi|420848698|ref|ZP_15313804.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-102]
gi|420859561|ref|ZP_15323186.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-113]
gi|421764011|ref|ZP_16200803.1| 23S rRNA mA1618 methyltransferase [Yersinia pestis INS]
gi|123246420|sp|Q1CHT7.1|RLMF_YERPN RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|123372352|sp|Q1C6E5.1|RLMF_YERPA RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|123777983|sp|Q7CJ72.1|RLMF_YERPE RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|21958466|gb|AAM85237.1|AE013770_3 hypothetical protein y1668 [Yersinia pestis KIM10+]
gi|108775924|gb|ABG18443.1| hypothetical protein YPN_2114 [Yersinia pestis Nepal516]
gi|108779919|gb|ABG13977.1| hypothetical protein YPA_2011 [Yersinia pestis Antiqua]
gi|115348218|emb|CAL21146.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|149291986|gb|EDM42060.1| hypothetical protein YPE_0741 [Yersinia pestis CA88-4125]
gi|165914325|gb|EDR32940.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922597|gb|EDR39748.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992602|gb|EDR44903.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204948|gb|EDR49428.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958846|gb|EDR55867.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051078|gb|EDR62486.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056594|gb|EDR66363.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229680060|gb|EEO76159.1| putative ribosomal RNA small subunit methyltransferase J [Yersinia
pestis Nepal516]
gi|229688162|gb|EEO80233.1| putative ribosomal RNA small subunit methyltransferase J [Yersinia
pestis biovar Orientalis str. India 195]
gi|229694420|gb|EEO84467.1| putative ribosomal RNA small subunit methyltransferase J [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|262362674|gb|ACY59395.1| hypothetical protein YPD4_2488 [Yersinia pestis D106004]
gi|262366303|gb|ACY62860.1| hypothetical protein YPD8_2183 [Yersinia pestis D182038]
gi|294354796|gb|ADE65137.1| hypothetical protein YPZ3_2227 [Yersinia pestis Z176003]
gi|320014650|gb|ADV98221.1| putative ribosomal RNA small subunitmethyltransferase J [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|342854783|gb|AEL73336.1| 23S rRNA mA1618 methyltransferase [Yersinia pestis A1122]
gi|391425174|gb|EIQ87476.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-01]
gi|391426345|gb|EIQ88534.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-02]
gi|391427008|gb|EIQ89135.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-03]
gi|391440326|gb|EIR00905.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-04]
gi|391441846|gb|EIR02298.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-05]
gi|391445325|gb|EIR05461.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-06]
gi|391457354|gb|EIR16299.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-07]
gi|391458267|gb|EIR17145.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-08]
gi|391473280|gb|EIR30672.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-10]
gi|391475002|gb|EIR32239.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-11]
gi|391475901|gb|EIR33063.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-12]
gi|391489456|gb|EIR45203.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-13]
gi|391490647|gb|EIR46281.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-15]
gi|391492371|gb|EIR47845.1| methyltransferase small domain protein [Yersinia pestis PY-14]
gi|391504842|gb|EIR58902.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-16]
gi|391505779|gb|EIR59763.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-19]
gi|391520814|gb|EIR73336.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-29]
gi|391523098|gb|EIR75438.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-34]
gi|391524221|gb|EIR76469.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-32]
gi|391538769|gb|EIR89548.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-42]
gi|391554039|gb|EIS03317.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-46]
gi|391554488|gb|EIS03732.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-47]
gi|391555624|gb|EIS04784.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-48]
gi|391569068|gb|EIS16707.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-52]
gi|391570024|gb|EIS17541.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-53]
gi|391576232|gb|EIS22820.1| methyltransferase small domain protein [Yersinia pestis PY-54]
gi|391582840|gb|EIS28560.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-55]
gi|391585549|gb|EIS30944.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-56]
gi|391596654|gb|EIS40566.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-58]
gi|391598941|gb|EIS42612.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-60]
gi|391600496|gb|EIS44023.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-59]
gi|391613307|gb|EIS55288.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-61]
gi|391613922|gb|EIS55840.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-63]
gi|391618219|gb|EIS59674.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-64]
gi|391626008|gb|EIS66429.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-65]
gi|391633141|gb|EIS72584.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-66]
gi|391639425|gb|EIS78107.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-72]
gi|391649053|gb|EIS86494.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-76]
gi|391653222|gb|EIS90209.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-88]
gi|391657752|gb|EIS94234.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-89]
gi|391661967|gb|EIS97955.1| methyltransferase small domain protein [Yersinia pestis PY-90]
gi|391670050|gb|EIT05127.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-91]
gi|391679228|gb|EIT13379.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-93]
gi|391680419|gb|EIT14463.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-92]
gi|391681247|gb|EIT15221.1| methyltransferase small domain protein [Yersinia pestis PY-94]
gi|391693206|gb|EIT25975.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-95]
gi|391696266|gb|EIT28766.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-96]
gi|391697995|gb|EIT30346.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-98]
gi|391713542|gb|EIT44306.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-100]
gi|391714346|gb|EIT45010.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-101]
gi|391725496|gb|EIT54955.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-102]
gi|391733938|gb|EIT62260.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-113]
gi|411175325|gb|EKS45351.1| 23S rRNA mA1618 methyltransferase [Yersinia pestis INS]
Length = 336
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 169/369 (45%), Gaps = 78/369 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G +D+ D A + L + LL
Sbjct: 24 KEKSGLHPRNRHCSRY-DFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 83 HFYGIEYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIP----KGKNIALLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLK-------------- 184
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
++ +P + + GV E++D +
Sbjct: 185 -------------------QQKDPHA------------------IFEGVWAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
VA Q W+TS++ +K+ L + LR V V+T E QGQ +AW+F+ P ++
Sbjct: 268 VAKAQNCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSRFVAWTFLTPEQQ 327
Query: 351 IISPHVAEK 359
+ VAE+
Sbjct: 328 --AAWVAER 334
>gi|429211977|ref|ZP_19203142.1| SAM-dependent methyltransferase [Pseudomonas sp. M1]
gi|428156459|gb|EKX03007.1| SAM-dependent methyltransferase [Pseudomonas sp. M1]
Length = 329
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 161/348 (46%), Gaps = 71/348 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L + P +V + G+P ID+ D A R R LL +G+
Sbjct: 25 LHPRNRH-QGRYDFPSLIAASPELGDYVITNPYGKPSIDFADPQAVRVFNRALLKAQYGI 83
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP LCP +P R++Y+H++ DLL+ + R G V+ DIG GANCIYPL+G
Sbjct: 84 GHWEIPADFLCPPIPGRADYVHYLADLLAEDNEGCVPR-GPGVRVLDIGVGANCIYPLIG 142
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW F+G+D+ AL A V NP ++E IE+R
Sbjct: 143 HRDYGWRFLGADIEPAALASARNIVLGNPGLAEAIELR---------------------- 180
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+++EP Q +H G++ E+F +CNPPF S
Sbjct: 181 -----------QQSEP------------QHIFH------GLLHADERFHASLCNPPFHAS 211
Query: 255 MEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
EEA P + GG E+ C GGE AF+ R+ +S + Q
Sbjct: 212 PEEARAGSRRKWKNLGKLDPSRKLPLLNFGGQSNELWCEGGEIAFLKRMASESREVAQQV 271
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+W++S+V + NL L+K G V+T + QGQ +AW+F+
Sbjct: 272 QWFSSLVSKAGNLDDFRRALKKAGALQVRTLDMAQGQKQSRFVAWTFL 319
>gi|162421282|ref|YP_001606266.1| putative SAM-dependent methyltransferase [Yersinia pestis Angola]
gi|205829622|sp|A9R6I2.1|RLMF_YERPG RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|162354097|gb|ABX88045.1| conserved hypothetical protein [Yersinia pestis Angola]
Length = 336
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 169/369 (45%), Gaps = 78/369 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G +D+ D A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLTPTAYGDISVDFADPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 83 HFYGIEYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIP----KGKNIALLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLK-------------- 184
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
++ +P + + GV E++D +
Sbjct: 185 -------------------QQKDPHA------------------IFEGVWAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
VA Q W+TS++ +K+ L + LR V V+T E QGQ +AW+F+ P ++
Sbjct: 268 VAKAQNCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSRFVAWTFLTPEQQ 327
Query: 351 IISPHVAEK 359
+ VAE+
Sbjct: 328 --AAWVAER 334
>gi|398992100|ref|ZP_10695151.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM24]
gi|399011455|ref|ZP_10713787.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM16]
gi|398118197|gb|EJM07937.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM16]
gi|398134347|gb|EJM23512.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM24]
Length = 339
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 166/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVITNPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP VP R++Y+H++ DLL+S R G V DIG GANC+Y
Sbjct: 86 FYGIQHWDIPADYLCPPVPGRADYVHFLADLLASMNDGKVPR-GAIVNVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +S++I++R+ +N +
Sbjct: 145 PLIGNSEYRWHFLGSEIDPTAVAAAKAIVQSN-DLSKVIQLRQQENRKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILIGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA +PK GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESANF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|410622658|ref|ZP_11333488.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola pallidula
DSM 14239 = ACAM 615]
gi|410157786|dbj|GAC28862.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola pallidula
DSM 14239 = ACAM 615]
Length = 333
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 168/366 (45%), Gaps = 85/366 (23%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
++ +P +H +N ++ DF LA ++ F+F + G+ ID++ A + L
Sbjct: 24 KKTNAKPEMHHRNAHNLGY-DFVKLAEVHVPLRKFLFANPAGKLSIDFSQPCAVKALNAG 82
Query: 68 LLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFDIG 123
LL + + NW IPDG LCP VP R++YIH+I DLL + IP G +++G DIG
Sbjct: 83 LLKQFYQVQNWDIPDGFLCPAVPGRADYIHYIADLLGQDKNGQIP----QGKQIRGLDIG 138
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP++ + GW +GSD+ + A V+SNP++ +L+++R
Sbjct: 139 TGANLIYPIVASQSYGWKMIGSDINQASYSGASLIVESNPNLVKLVKVR----------- 187
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+Q + N + GV++D E FD
Sbjct: 188 --------LQKQQN--------------------------------AIFAGVIKDDELFD 207
Query: 244 FCICNPPFFESMEEA------------------------GLNPKT-SCGGTPEEMVCSGG 278
F +CNPPF S + A +N + + GG E+ C GG
Sbjct: 208 FSLCNPPFHISADAALAGSRKKNKNLARHSQKRRGKDSTAINQSSLNFGGQHNELWCEGG 267
Query: 279 ERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRW 338
E F+ +I +SV+ K +W+TS++ +K N+ L++ K+G T KT QG
Sbjct: 268 EFEFVKNMITESVSFKGQVKWFTSLLSKKDNVVPLLTLAEKLGATECKTINMAQGAKASR 327
Query: 339 GLAWSF 344
+AW F
Sbjct: 328 FIAWRF 333
>gi|212559199|gb|ACJ31653.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 324
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 162/364 (44%), Gaps = 89/364 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N ++ DF L S + +PFV + G ID+ A + L LL H +G+
Sbjct: 1 MHPRNLHNAGY-DFEALISSFNELKPFVSRNDFGNLSIDFASPKAVKALNAALLKHHYGV 59
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN----GDKVKGFDIGTGANCIY 130
NW IP+G LCP +P R++YIH I DLL+ + +S+N GDK+ DIGTGAN IY
Sbjct: 60 DNWDIPEGFLCPPIPGRADYIHHIADLLA---VKKSSKNKIPKGDKITVLDIGTGANVIY 116
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG GW FVGSD+ +LE A++ NP IS R N++
Sbjct: 117 PLLGVQSYGWQFVGSDVDPASLENAQQIFAKNPGISGKFSCRLQGNTQH----------- 165
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
V G++ ++FD +CNPP
Sbjct: 166 ----------------------------------------VFNGIINKDDRFDVTLCNPP 185
Query: 251 FFESMEEAG--------------------------LNPKTSC---GGTPEEMVCSGGERA 281
F S+ EA N +T+ GG E+ C GGER
Sbjct: 186 FHASLAEASAGTARKLTNLAANRAAKSGSKATKKTANIETAVLNFGGQKAELWCEGGERQ 245
Query: 282 FITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341
F++ +I +S + W+TS++ +K NLK + L+KV VK E QG LA
Sbjct: 246 FLSNMISESRSYASQCFWFTSLISKKENLKPAQALLQKVNAHQVKVIEMHQGSKITRILA 305
Query: 342 WSFV 345
W+F+
Sbjct: 306 WTFL 309
>gi|83955232|ref|ZP_00963887.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Sulfitobacter sp. NAS-14.1]
gi|83840225|gb|EAP79399.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Sulfitobacter sp. NAS-14.1]
Length = 308
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 162/350 (46%), Gaps = 76/350 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +HP+N ++E DFA L + P PF + G+ ID+ D A R L R LL D
Sbjct: 4 KTNLHPRNLHNEGY-DFARLIAALPELGPFTTPNPAGQTTIDFRDVAAVRMLNRALLKAD 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANC 128
+G+++W IP LCP +P R +YIH + DLL+ +N IP G ++K DIGTGA+
Sbjct: 63 YGIDFWDIPPNYLCPPIPGRVDYIHHLADLLARSNNNEIP----RGPQIKALDIGTGASL 118
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YPL G S GW F G D+ VA++ A++ K+N + +++R +N E
Sbjct: 119 VYPLTGQSAYGWQFTGVDIDPVAIKSAQQIAKAN---ALDVDLRLQENRED--------- 166
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ GV+ ++F +CN
Sbjct: 167 ------------------------------------------IFDGVIHPDDRFHVTLCN 184
Query: 249 PPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF SME A G + K + GG E+ C GGE FI +++ S A+
Sbjct: 185 PPFHASMERATKGTQRKWANLGKGRSGKLNFGGQNAELWCPGGEIRFIANMVDQSRAIAG 244
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V +K N++ L L+K V E QGQ +AW+F+
Sbjct: 245 QCLWFTSLVSKKDNVQTLYKILKKAKVANCDVVEMAQGQKTSRFIAWTFI 294
>gi|422013881|ref|ZP_16360499.1| 23S rRNA mA1618 methyltransferase [Providencia burhodogranariea DSM
19968]
gi|414102393|gb|EKT63986.1| 23S rRNA mA1618 methyltransferase [Providencia burhodogranariea DSM
19968]
Length = 336
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 171/358 (47%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ EPFV + G +D+ D A +
Sbjct: 17 EKKKTFLQQKSGLHPRNRHRSRY-DFPALIASCPALEPFVKPNAWGDISVDFADPAAVKM 75
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 76 LNRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKGVAILDV 134
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+L A+ V+ NP + + +R
Sbjct: 135 GIGANCIYPIIGLREYGWRFTGSEIDPVSLNTAKMIVEMNPTLRNGVRLR---------- 184
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + ++G ++GV E+F
Sbjct: 185 ---------LQKQPEFILNG-----------------------------IIGV---AEKF 203
Query: 243 DFCICNPPFFESMEEAGLN----------------PKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA + P + GG +E+ C GGE AF+ ++
Sbjct: 204 DATLCNPPFHSSEQEAQASTRRKLHKLGKGEVADTPVHNFGGKNKELWCEGGEEAFVRKM 263
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+E+SV L Q W+TS++ + + L + L+ VG V+T E QGQ +AW+F
Sbjct: 264 VEESVNLAQNCLWFTSLISKNTTLPSIYHALKLVGAVEVRTIEMAQGQKISRFVAWTF 321
>gi|54302571|ref|YP_132564.1| SAM-dependent methyltransferase [Photobacterium profundum SS9]
gi|81398242|sp|Q6LIW6.1|RLMF_PHOPR RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|46915993|emb|CAG22764.1| hypothetical SAM-dependent methyltransferase [Photobacterium
profundum SS9]
Length = 338
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 166/365 (45%), Gaps = 91/365 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N +S+ DF L P PFV ++ G +D++D A + L + LL H + +
Sbjct: 15 LHPRNPHSQRY-DFNALILSCPDLTPFVAENQFGDLSVDFSDPAAVKMLNKALLHHFYNV 73
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYP 131
NW IP G LCP +P R++YIH I DLL+ + +IP G + G DIG GANC+YP
Sbjct: 74 ENWDIPPGYLCPPIPGRADYIHHIADLLAKSNEGVIP----QGKHINGLDIGMGANCVYP 129
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G GW FVGSD+ ++++ A+ V+SN ++ I+ R S++
Sbjct: 130 IIGHRAYGWRFVGSDVDALSIKSAKFIVESNRSLAGGIKCRLQKKSDN------------ 177
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ G++ + FDF +CNPPF
Sbjct: 178 ---------------------------------------IFTGIINANDIFDFTMCNPPF 198
Query: 252 FESMEEA------------------GLNPKTSC-------------GGTPEEMVCSGGER 280
S+EEA G N K GG E+ C GGE
Sbjct: 199 HASLEEATAGSERKVRNLSANAHKKGSNKKAELFAKSNTNKPVLNFGGQKAELWCPGGED 258
Query: 281 AFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340
AFI R+I +S + WY+++V +K NL L L++V V+T + QGQ +
Sbjct: 259 AFIQRMITESSDKPENCFWYSTLVSKKENLPALYKALKQVNAVDVRTIDMAQGQKVTRIV 318
Query: 341 AWSFV 345
AW+F+
Sbjct: 319 AWTFL 323
>gi|339998721|ref|YP_004729604.1| hypothetical protein SBG_0710 [Salmonella bongori NCTC 12419]
gi|339512082|emb|CCC29803.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 308
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 163/350 (46%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTAFLIRTPVGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + +W IP+G LCP VP R++YIH + DLL ++ IPT + D+G GANC
Sbjct: 63 FYAVAHWDIPEGFLCPPVPGRADYIHHLADLLGEATGSIPT------QATILDVGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +P++ + G++ E +D +CN
Sbjct: 162 ------------------QHDPAA------------------IFTGIIHKNEYYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A G N + GG +E+ C GGE AFI ++I +S ++
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQTFRR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L VG V E QGQ +AW+F+
Sbjct: 246 QVLWFTTLVSRGENLPPLYRALTAVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|345866413|ref|ZP_08818441.1| hypothetical protein BZARG_233 [Bizionia argentinensis JUB59]
gi|344049463|gb|EGV45059.1| hypothetical protein BZARG_233 [Bizionia argentinensis JUB59]
Length = 284
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 163/343 (47%), Gaps = 75/343 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N ++++ +F L P + FVF + G ID+ A +L + LLL D+GL
Sbjct: 1 MHPNNIHNKSY-NFDRLIISNPDLKTFVFRNEYGTKTIDFAQAEAVFQLNKALLLSDYGL 59
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
++ +P G LCP +P R++YIH I DL+ S+ P +KG DIG GAN IYP+LG
Sbjct: 60 AHYQLPVGYLCPPIPGRADYIHHIHDLIDSDPTP--------IKGLDIGVGANAIYPILG 111
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A + W VG+D+ ++E A+ ++ NP + + I+IR +N
Sbjct: 112 AQIYQWYMVGTDINAESVEIAKNTIELNPQLKDFIDIRFQEN------------------ 153
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
PA + G++++ E + F ICNPPF S
Sbjct: 154 ------------------------PAH---------IFEGIIKEDEHYHFTICNPPFHAS 180
Query: 255 MEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
++A L PK++ GG E+ C+GGE FI R+I++S + W+T
Sbjct: 181 EKDALKGTQRKLKNLNLEPKSTLNFGGQAHELWCNGGEALFIKRMIKESKKFENQVNWFT 240
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++V + NL L +L K+ T + + QGQ LAW F
Sbjct: 241 TLVSKAENLPKLTKQLNKLKAT-HRIIDMGQGQKISRILAWHF 282
>gi|420590304|ref|ZP_15083832.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-09]
gi|420638251|ref|ZP_15126798.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-25]
gi|420670331|ref|ZP_15155769.1| methyltransferase small domain protein [Yersinia pestis PY-45]
gi|420763525|ref|ZP_15237327.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-71]
gi|420854255|ref|ZP_15318567.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-103]
gi|391460521|gb|EIR19216.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-09]
gi|391510416|gb|EIR63951.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-25]
gi|391540943|gb|EIR91529.1| methyltransferase small domain protein [Yersinia pestis PY-45]
gi|391636943|gb|EIS75923.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-71]
gi|391727445|gb|EIT56664.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-103]
Length = 321
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 169/369 (45%), Gaps = 78/369 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G +D+ D A + L + LL
Sbjct: 9 KEKSGLHPRNRHCSRY-DFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLK 67
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 68 HFYGIEYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIP----KGKNIALLDIGVGA 123
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 124 NCIYPIIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLK-------------- 169
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
++ +P + + GV E++D +
Sbjct: 170 -------------------QQKDPHA------------------IFEGVWAVNERYDATL 192
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 193 CNPPFHGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 252
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
VA Q W+TS++ +K+ L + LR V V+T E QGQ +AW+F+ P ++
Sbjct: 253 VAKAQNCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSRFVAWTFLTPEQQ 312
Query: 351 IISPHVAEK 359
+ VAE+
Sbjct: 313 --AAWVAER 319
>gi|441504072|ref|ZP_20986069.1| Ribosomal RNA large subunit methyltransferase F [Photobacterium sp.
AK15]
gi|441428245|gb|ELR65710.1| Ribosomal RNA large subunit methyltransferase F [Photobacterium sp.
AK15]
Length = 334
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 168/362 (46%), Gaps = 88/362 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + E DF L P PF+ + G +D+++ +A + L + LL H + +
Sbjct: 14 LHPRNPHRERY-DFNALTKSCPQLAPFISENNFGDLSVDFSNPDAVKTLNKALLKHFYQV 72
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYP 131
W IP G LCP +P R++Y+H+I DLL+ + IPT G K+ G D+G GANC YP
Sbjct: 73 EHWDIPPGYLCPPIPGRADYLHYIADLLAESNEGEIPT----GRKIHGLDVGVGANCAYP 128
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G + GWSFVG+D+ ++++ A+ V++N ++ I+ R N E
Sbjct: 129 IVGHRVYGWSFVGADIDALSIKSAKFIVEANQTLAGGIKCRLQKNPEH------------ 176
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ G++ D + FDF +CNPPF
Sbjct: 177 ---------------------------------------IFQGMINDKDIFDFTMCNPPF 197
Query: 252 FESMEEA---------GLN-------------------PKTSCGGTPEEMVCSGGERAFI 283
S+E+A LN P + GG E+ C GGE AFI
Sbjct: 198 HASLEDAMAGSERKVRNLNANARKKGTKGFDLAEKSKKPVLNFGGQKAELWCPGGEIAFI 257
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
R+I+ S W+T++V +K NL + + L+KVG V+T QGQ +AW+
Sbjct: 258 KRMIKQSAEKAAQCFWFTTLVSKKENLSAIYNALKKVGAVDVRTLNMSQGQKQTRVVAWT 317
Query: 344 FV 345
F+
Sbjct: 318 FL 319
>gi|298483382|ref|ZP_07001560.1| methyltransferase [Bacteroides sp. D22]
gi|298270511|gb|EFI12094.1| methyltransferase [Bacteroides sp. D22]
Length = 311
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 168/357 (47%), Gaps = 76/357 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +H +NK++ DF LL YP + FV + G I++ + A + L + LL+
Sbjct: 3 QKGELHIRNKHN-GQYDFPLLIEKYPPLKRFVSLNPLGVQTINFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS----SNIIPTTSRNGD----KVKGFDI 122
+G+ +W IP LCP +P R++YIH+I DL+ +N + T + + K + D+
Sbjct: 62 YYGIRYWDIPKQYLCPPIPGRADYIHYIADLIQPDRVANDLQTEEEDANEQKTKCRCLDV 121
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G + GW+FVGSD+ V++E A K V NP ++ I++R +S+
Sbjct: 122 GVGANCIYPIIGHTEYGWTFVGSDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSQK--- 178
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ G++ GE F
Sbjct: 179 ------------------------------------------------IFDGIIMPGEYF 190
Query: 243 DFCICNPPFFESMEEA------------GLNPKT---SCGGTPEEMVCSGGERAFITRII 287
D ICNPPF S EEA G+ K + GG+ E+ C GGE FI +I
Sbjct: 191 DVTICNPPFHSSKEEAEDGTLRKLSSLKGMKVKKVQLNFGGSANELWCEGGEIRFILNMI 250
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S ++ W+TS+V ++ NL+ L +KL+ V V+ K QG LAW F
Sbjct: 251 SESQKYQKNCGWFTSLVSKEKNLEKLCAKLKSVNVSEYKIIRMQQGTKSSRILAWRF 307
>gi|393781094|ref|ZP_10369295.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
salyersiae CL02T12C01]
gi|392677429|gb|EIY70846.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
salyersiae CL02T12C01]
Length = 296
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 162/349 (46%), Gaps = 71/349 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +HPKNK++ DF L YP + FV + G ID+ + A + L + LL+
Sbjct: 3 ERNELHPKNKHN-GQYDFTKLTEDYPPLKKFVSLNPYGSQTIDFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP +P R++YIH+I +L+ + T+ K DIG GANCIY
Sbjct: 62 YYGIRYWDIPKNYLCPPIPGRADYIHYIAELIGTE---NTATGISGRKCLDIGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P++G + GW+FVGSD+ V++ A K V NP + IE+R +Q
Sbjct: 119 PIIGCTEYGWTFVGSDIDPVSIANARKIVTCNPVLVHRIELR----------LQ------ 162
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+D N + GV+ + FD ICNPP
Sbjct: 163 --KDRRN---------------------------------IFEGVILPDDFFDVTICNPP 187
Query: 251 FFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
F S EEA G K S GG E+ C GGE F+ +I +S ++
Sbjct: 188 FHSSKEEAEEGTLRKLSSLKGKKVSKAQLNFGGNANELWCEGGELRFLLNMITESRKFRK 247
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+W+TS+V ++ NL L +KL+ GV +T + QG LAW F
Sbjct: 248 NCKWFTSLVSKEKNLDKLYAKLKSTGVAEYRTIQMQQGTKNSRILAWRF 296
>gi|53714368|ref|YP_100360.1| SAM-dependent methyltransferase [Bacteroides fragilis YCH46]
gi|81381889|sp|Q64RQ5.1|RLMF_BACFR RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|52217233|dbj|BAD49826.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 305
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 161/355 (45%), Gaps = 74/355 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +N+++ DF+ L YP + F+ + G ID+ + A + L + LL+
Sbjct: 3 ERNELHKRNRHN-GQYDFSRLTEEYPPLKKFIVLNAYGTTSIDFFNPRAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI------IPTTSRNGDKVKGFDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ +I + T N + + DIG
Sbjct: 62 CYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPDISDESTGLKTAIPNARQYRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVGSD+ V+++ A K V NP ++ IE+R +S
Sbjct: 122 GANCIYPIIGQTEYGWTFVGSDIDPVSIDNARKIVTCNPALAHKIELRLQRDSRK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFEGIIAPNEYFDV 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+CNPPF S EEA + + GG E+ C GGE F+ +IE+
Sbjct: 191 TLCNPPFHSSKEEAEDGTLRKLSSLKGKKVTKARLNFGGNANELWCEGGELRFLLTMIEE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL L +KL+ + + E QG LAW F
Sbjct: 251 SRNYRKNCGWFTSLVSKEKNLGKLTAKLKSTDIAEHRIIEMHQGTKTSRILAWRF 305
>gi|404399476|ref|ZP_10991060.1| 23S rRNA mA1618 methyltransferase [Pseudomonas fuscovaginae
UPB0736]
Length = 346
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 170/360 (47%), Gaps = 78/360 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N++ + DF L P FV + G+ ID+ D A R R LL
Sbjct: 27 EKAALHPRNRH-QGRYDFPQLIKGCPELGQFVIINPYGKESIDFADPAAVRVFNRALLKA 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP VP R++Y+H++ DLL+++ +IP G V+ DIG GAN
Sbjct: 86 FYGIAHWDIPADFLCPPVPGRADYVHFLADLLANHNDGVIP----RGAAVRVLDIGVGAN 141
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G W F+GSD+ AL A+ V+SN ++++I +R+ DN +
Sbjct: 142 CIYPLIGHGDYRWQFLGSDINPTALAAAKAIVQSN-GLNKVISLRQQDNPKH-------- 192
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L G++ E+FD +C
Sbjct: 193 -------------------------------------------ILAGLLESTERFDLTMC 209
Query: 248 NPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDS 290
NPPF S++EA +PK GG E+ C GGE F+T++I +S
Sbjct: 210 NPPFHASLDEAQSGSRRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEARFVTQLINES 269
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+L W++++V + SNL + + L+K GV + E QGQ +AW+F AR+
Sbjct: 270 PSLANQVLWFSTLVSKASNLPAIEAALKKAGVLESRVVEMSQGQKQSRFVAWTFQDKARQ 329
>gi|170023837|ref|YP_001720342.1| putative SAM-dependent methyltransferase [Yersinia
pseudotuberculosis YPIII]
gi|186895952|ref|YP_001873064.1| putative SAM-dependent methyltransferase [Yersinia
pseudotuberculosis PB1/+]
gi|169750371|gb|ACA67889.1| protein of unknown function DUF890 [Yersinia pseudotuberculosis
YPIII]
gi|186698978|gb|ACC89607.1| protein of unknown function DUF890 [Yersinia pseudotuberculosis
PB1/+]
Length = 321
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 169/369 (45%), Gaps = 78/369 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G +D+ D A + L + LL
Sbjct: 9 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLK 67
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 68 HFYGIEYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIP----KGKNIALLDIGVGA 123
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 124 NCIYPIIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLK-------------- 169
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
++ +P + + GV E++D +
Sbjct: 170 -------------------QQKDPHA------------------IFEGVWAVNERYDATL 192
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 193 CNPPFHGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 252
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
VA Q W+TS++ +K+ L + LR V V+T E QGQ +AW+F+ P ++
Sbjct: 253 VAKAQNCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSRFVAWTFLTPEQQ 312
Query: 351 IISPHVAEK 359
+ VAE+
Sbjct: 313 --AAWVAER 319
>gi|402495825|ref|ZP_10842544.1| 23S rRNA mA1618 methyltransferase [Aquimarina agarilytica ZC1]
Length = 299
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 164/352 (46%), Gaps = 75/352 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+NK+ E DF +L + P+ + FV ++ G ID+++ + L LL H
Sbjct: 2 KKANLHPRNKHIERY-DFDVLTTTLPALKEFVRPNQYGDLSIDFSNPTGVKALNSALLKH 60
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGAN 127
+ +++W IP+G LC +P R++YIH+I DLL+ +N IPT G+K DIG GAN
Sbjct: 61 YYNIDFWDIPEGHLCSPIPGRADYIHYIADLLAEHNNNNIPT----GEKTICLDIGVGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
C+YP++G S GWSF+GSD+++VAL AE + NP ++ +++R N S
Sbjct: 117 CVYPIIGNSAYGWSFIGSDISEVALASAESIISKNPQLNGKVDLRLQGNPNS-------- 168
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ ++++ E IC
Sbjct: 169 -------------------------------------------IFRDILKEDEHIAISIC 185
Query: 248 NPPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S E A NP+ + GG E+ C GGE FI II S
Sbjct: 186 NPPFHASAEAALSSNFRKVKNLTGQEIENPELNFGGQHNELWCEGGELKFIKNIIFQSRN 245
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
K W++S+V +K +++ L L++ V K QG +AW+F
Sbjct: 246 YKNNCTWFSSLVSKKDHIRPLKKALKEAEVASFKVIPMGQGNKVSRIIAWTF 297
>gi|398978788|ref|ZP_10688067.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM25]
gi|398136783|gb|EJM25863.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM25]
Length = 340
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 163/348 (46%), Gaps = 72/348 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N++ + DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 SLHPRNRH-QGRYDFPALIKTTPELAKFVITNPYGKESIDFASPDAVRVFNRALLKSFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ W IP LCP VP R++YIH++ DLL+SN R G V DIG GANC+YPL+
Sbjct: 89 IQHWDIPADYLCPPVPGRADYIHFLADLLASNNDGVVPR-GAIVNVLDIGMGANCVYPLI 147
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G S W F+GS++ A+ A+ V+SN ++++I++R+ +N +
Sbjct: 148 GNSEYRWHFLGSEIDPTAVAAAKAIVQSN-DLNKVIQLRQQENRKH-------------- 192
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+L+G++ GE+FD +CNPPF
Sbjct: 193 -------------------------------------ILIGLLEPGERFDLTMCNPPFHA 215
Query: 254 SMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALKQT 296
SMEEA +PK GG E+ C GGE F+T++I +S
Sbjct: 216 SMEEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESANFAHK 275
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K G + E QGQ +AW+F
Sbjct: 276 VLWFSTLVSKASNLPAIETALKKAGALESQVVEMSQGQKQSRFVAWTF 323
>gi|406597622|ref|YP_006748752.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii ATCC
27126]
gi|406374943|gb|AFS38198.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii ATCC
27126]
Length = 326
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 161/378 (42%), Gaps = 101/378 (26%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HPKN + P L YP+ + F+ ++ G ID+T A + L LL H + L
Sbjct: 1 MHPKNLHKNGYP-MDTLCQTYPALKSFLVRAKSGNTSIDFTSPKAVKVLNAALLHHYYRL 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNG--DKVKGFDIGTGANCIYPL 132
+W IPDG LCP VP R++YIH I DLL S+ S+ G V+G DIG GAN IYP+
Sbjct: 60 EYWDIPDGYLCPPVPGRADYIHGIADLLKSSAQGEQSQQGKDQNVRGLDIGVGANAIYPI 119
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+G + WSFVGSD+ DVA++ A+ N ++ ++RK N S
Sbjct: 120 IGVTSYDWSFVGSDVDDVAVKSAKAIASKNSVLAHKFQVRKQLNRAS------------- 166
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ GV+ E+F F +CNPPF
Sbjct: 167 --------------------------------------IFNGVIEANERFTFTMCNPPFH 188
Query: 253 ESMEEA--GLNPKTS--------------------------------------------C 266
+S +EA G KTS
Sbjct: 189 KSAQEALSGTRRKTSNLTRNKQKRSGTKFTDNRKQGFGHRTSKLQGKNAAYQGKDANLNF 248
Query: 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326
G E+ C GGE AFI R++++SV++K W+T +V + ++LK + + + G K
Sbjct: 249 AGQANELWCEGGELAFIQRMVQESVSVKDNVEWFTCLVSKSAHLKPIKTSIDYYGAAQCK 308
Query: 327 TTEFVQGQTCRWGLAWSF 344
+ QG +AW+F
Sbjct: 309 VIDMGQGSKLSRFVAWTF 326
>gi|212710890|ref|ZP_03319018.1| hypothetical protein PROVALCAL_01958 [Providencia alcalifaciens DSM
30120]
gi|212686587|gb|EEB46115.1| hypothetical protein PROVALCAL_01958 [Providencia alcalifaciens DSM
30120]
Length = 336
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 170/358 (47%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ EPFV + G +++ D A +
Sbjct: 17 EKKKTFLQQKSGLHPRNRHRSRY-DFPALIASCPALEPFVKPNAWGDISVNFADPAAVKM 75
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ +W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 76 LNRALLQHFYGIEYWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKGVAILDV 134
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+ A+ V+ NP + + +R
Sbjct: 135 GVGANCIYPIIGLREYGWRFTGSEINPVSFNTAKMIVEMNPILRNGVRLR---------- 184
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + ++G ++GV E+F
Sbjct: 185 ---------LQKQPEFILNG-----------------------------IIGV---AEKF 203
Query: 243 DFCICNPPFFESMEEAGLN----------------PKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA + P + GG E+ C GGE AF+ ++
Sbjct: 204 DATLCNPPFHSSQQEAQASTRRKLHKLGKGEVADTPVQNFGGKNNELWCEGGEEAFVRKM 263
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+E+SV+L Q W+TS++ + + L + L VG V+T E QGQ +AW+F
Sbjct: 264 VEESVSLAQNCLWFTSLISKNTTLPSIYHALNLVGAVEVRTIEMAQGQKISRFVAWTF 321
>gi|383123931|ref|ZP_09944601.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
1_1_6]
gi|251838836|gb|EES66921.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
1_1_6]
Length = 307
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 163/356 (45%), Gaps = 74/356 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +NK++ DF+LL YP FV + G ID+ + +A + L + LL+
Sbjct: 3 ERSELHTRNKHN-GQYDFSLLTENYPPLRKFVLLNPLGIQTIDFFNPHAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS--RNGDKVK----GFDIGT 124
+G+ +W IP LCP +P R++Y+H+I DL+ + T+ NGDK K DIG
Sbjct: 62 YYGIRYWDIPKNYLCPPIPGRADYVHYIADLIDPERVSNTANEENGDKPKRQCRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G GW FVGSD+ V++E A K V NP ++ I++R
Sbjct: 122 GANCIYPIIGHVEYGWMFVGSDIDPVSIENARKIVTCNPVLAHKIDLR------------ 169
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+Q ++ G ++ E FD
Sbjct: 170 -------LQKDNRRIFDG--------------------------------IIAPDEYFDV 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
ICNPPF S +EA K + GG E+ C GGE F+ +I +
Sbjct: 191 TICNPPFHSSKKEAEEGTLRKLSSLKGEKVKKTKLNFGGNANELWCEGGELRFLLNMISE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
S ++ W+TS+V ++ NL L +KL+ V V+ K QG LAW F+
Sbjct: 251 SRKYRKNCGWFTSLVSKEKNLDKLYAKLKAVHVSEYKIIRMCQGTKNSRILAWRFL 306
>gi|195123315|ref|XP_002006153.1| GI18716 [Drosophila mojavensis]
gi|193911221|gb|EDW10088.1| GI18716 [Drosophila mojavensis]
Length = 306
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 162/350 (46%), Gaps = 70/350 (20%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
RR ++ +HP+N PD+ LA Y F +G+ I++ + RELT++
Sbjct: 3 RRNNKKFVMHPRNVL-RTAPDYTKLAIKYKDFRQVCQLELNGKVSINFRNERTLRELTKM 61
Query: 68 LLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
LLL GL+ G L PT+ R NYI W+EDLL+ + V G DIG G++
Sbjct: 62 LLLEYFGLHVDFAPGSLVPTLALRLNYILWLEDLLAPLKLAA-------VNGIDIGCGSS 114
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP--HISELIEIRKVDNSESTPSIQE 185
CIY LL A W + + +E+A +NVK N H+ E+ E
Sbjct: 115 CIYSLLAAKKNQWKMLALESKRENIEFARENVKRNELQHLVEVFE--------------- 159
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+P S F +S + L EQF FC
Sbjct: 160 -----------------------QPDKQSIF------KSFFESSSALAK-----EQFHFC 185
Query: 246 ICNPPFFESMEEAGLN-----------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
+CNPPFF+S + + P GT EE+ C+GGE +F+ RI+++S A K
Sbjct: 186 LCNPPFFDSNAKNPFDANTRNPERRPAPNNVRTGTDEELTCAGGEVSFVQRIVDESEAYK 245
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ +TSM+G K+N+ ++ LR+ ++ V TTEF QG T RW +AWSF
Sbjct: 246 ERVLIFTSMLGVKANVPKILGYLRERQISNVCTTEFHQGHTTRWAVAWSF 295
>gi|375359173|ref|YP_005111945.1| hypothetical protein BF638R_2925 [Bacteroides fragilis 638R]
gi|383119115|ref|ZP_09939854.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
3_2_5]
gi|423260867|ref|ZP_17241769.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL07T00C01]
gi|423267002|ref|ZP_17245984.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL07T12C05]
gi|251946330|gb|EES86707.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
3_2_5]
gi|301163854|emb|CBW23409.1| conserved hypothetical protein [Bacteroides fragilis 638R]
gi|387774628|gb|EIK36738.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL07T00C01]
gi|392697705|gb|EIY90888.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
fragilis CL07T12C05]
Length = 305
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 161/355 (45%), Gaps = 74/355 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +N+++ DF+ L YP + F+ + G ID+ + A + L + LL+
Sbjct: 3 ERNELHKRNRHN-GQYDFSRLTEEYPPLKKFIVLNAYGTTSIDFFNPRAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI------IPTTSRNGDKVKGFDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ +I + T N + + DIG
Sbjct: 62 YYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPDISDESTGLKTAVPNTRQYRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVGSD+ V+++ A K V NP ++ IE+R +S
Sbjct: 122 GANCIYPIIGQTEYGWTFVGSDIDPVSIDNARKIVTCNPALAHKIELRLQRDSRK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFEGIIAPNEYFDV 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+CNPPF S EEA + + GG E+ C GGE F+ +IE+
Sbjct: 191 TLCNPPFHSSKEEAEDGTLRKLSSLKGKKVTKARLNFGGNANELWCEGGELRFLLTMIEE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL L +KL+ + + E QG LAW F
Sbjct: 251 SRNYRKNCGWFTSLVSKEKNLGKLTAKLKSTDIAEHRIIEMHQGTKTSRILAWRF 305
>gi|146283395|ref|YP_001173548.1| putative SAM-dependent methyltransferase [Pseudomonas stutzeri
A1501]
gi|205829580|sp|A4VP05.1|RLMF_PSEU5 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|145571600|gb|ABP80706.1| predicted SAM-dependent methyltransferase [Pseudomonas stutzeri
A1501]
Length = 327
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 170/365 (46%), Gaps = 80/365 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
R E + +HP+N++S DF L + P +V + G+ ID+ + +A R R
Sbjct: 10 RPAEPKAVLHPRNRHSGRY-DFPKLIAACPELGEYVILNPYGKQSIDFANPDAVRVFNRA 68
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL +G+ W IP G LCP VP R++Y+H + DLL+++ +IP G V+ DIG
Sbjct: 69 LLRQFYGIQHWDIPAGYLCPPVPGRADYLHGLADLLAADNAGVIP----RGAAVRVLDIG 124
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGANCIYPL+G GW F GSD+ AL A V +N + ++IE+R+ D S
Sbjct: 125 TGANCIYPLIGHREYGWRFTGSDIDATALASARTIVAAN-RLDKVIELRRQDTSTQ---- 179
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+ G++ E+F+
Sbjct: 180 -----------------------------------------------LFKGILAADERFE 192
Query: 244 FCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRI 286
+CNPPF S EA PK + GG E+ C GGE AF+ R+
Sbjct: 193 LTLCNPPFHASQAEAASGSQRKWRNLGKLDPSRKLPKLNFGGQAAELWCEGGEAAFVARM 252
Query: 287 IEDSVAL-KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
++SVA KQ +R ++++V + N+ L+ +L+++G V+ + QGQ + W+F+
Sbjct: 253 ADESVAYAKQVYR-FSTLVSKGGNVAPLMVRLQRLGALQVQALDMAQGQKKSRFVTWTFL 311
Query: 346 PPARK 350
A +
Sbjct: 312 DAAEQ 316
>gi|77457212|ref|YP_346717.1| SAM-dependent methyltransferase [Pseudomonas fluorescens Pf0-1]
gi|123605865|sp|Q3KHM8.1|RLMF_PSEPF RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|77381215|gb|ABA72728.1| 23S rRNA m(6)A-1618 methyltransferase [Pseudomonas fluorescens
Pf0-1]
Length = 340
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 162/348 (46%), Gaps = 72/348 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N++ + DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 SLHPRNRH-QGRYDFPALIKTTPELAKFVITNPYGKESIDFASPDAVRVFNRALLKSFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ W IP LCP VP R++YIH++ DLL+SN R G V DIG GANC+YPL+
Sbjct: 89 IQHWDIPADYLCPPVPGRADYIHFLADLLASNNDGVVPR-GAIVNVLDIGMGANCVYPLI 147
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G S W F+GS++ A+ A V+SN ++++I++R+ +N +
Sbjct: 148 GNSEYRWHFLGSEIDPTAVAAARAIVQSN-DLNKVIQLRQQENRKH-------------- 192
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+L+G++ GE+FD +CNPPF
Sbjct: 193 -------------------------------------ILIGLLEPGERFDLTMCNPPFHA 215
Query: 254 SMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALKQT 296
SMEEA +PK GG E+ C GGE F+T++I +S
Sbjct: 216 SMEEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESANFAHK 275
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K G + E QGQ +AW+F
Sbjct: 276 VLWFSTLVSKASNLPAIETALKKAGALESQVVEMSQGQKQSRFVAWTF 323
>gi|29350099|ref|NP_813602.1| SAM-dependent methyltransferase [Bacteroides thetaiotaomicron
VPI-5482]
gi|81442604|sp|Q89YP0.1|RLMF_BACTN RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|29342011|gb|AAO79796.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 307
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 163/356 (45%), Gaps = 74/356 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +NK++ DF+LL YP FV + G ID+ + +A + L + LL+
Sbjct: 3 ERSELHTRNKHN-GQYDFSLLTENYPPLRKFVLLNPLGIQTIDFFNPHAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS--RNGDKVK----GFDIGT 124
+G+ +W IP LCP +P R++Y+H+I DL+ + T+ NGDK K DIG
Sbjct: 62 YYGIRYWDIPRNYLCPPIPGRADYVHYIADLIDPERVSNTANEENGDKPKRQCRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G GW FVGSD+ V++E A K V NP ++ I++R
Sbjct: 122 GANCIYPIIGHVEYGWMFVGSDIDPVSIENARKIVTCNPVLAHKIDLR------------ 169
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+Q ++ G ++ E FD
Sbjct: 170 -------LQKDNRRIFDG--------------------------------IIAPDEYFDV 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
ICNPPF S +EA K + GG E+ C GGE F+ +I +
Sbjct: 191 TICNPPFHSSKKEAEEGTLRKLSSLKGEKVKKTKLNFGGNANELWCEGGELRFLLNMISE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
S ++ W+TS+V ++ NL L +KL+ V V+ K QG LAW F+
Sbjct: 251 SRKYRKNCGWFTSLVSKEKNLDKLYAKLKAVHVSEYKIIRMCQGTKNSRILAWRFL 306
>gi|398966023|ref|ZP_10681315.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM30]
gi|398146553|gb|EJM35291.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM30]
Length = 339
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVITNSYGKESIDFASPDAVRVFNRALLKV 85
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP VP R++Y+H++ DLL+S R G V DIG GANC+Y
Sbjct: 86 FYGIEHWDIPADYLCPPVPGRADYVHFLADLLASMNDGKVPR-GAIVNVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A V+SN ++++I++R+ +N +
Sbjct: 145 PLIGNSEYRWHFLGSEIDPTAVAAARAIVQSN-GLNKVIQLRQQENRKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILIGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F SMEEA +PK GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMEEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESANF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|269139655|ref|YP_003296356.1| SAM-dependent methyltransferase [Edwardsiella tarda EIB202]
gi|387868212|ref|YP_005699681.1| Ribosomal RNA large subunit methyltransferase F [Edwardsiella tarda
FL6-60]
gi|267985316|gb|ACY85145.1| putative SAM-dependent methyltransferase [Edwardsiella tarda
EIB202]
gi|304559525|gb|ADM42189.1| Ribosomal RNA large subunit methyltransferase F [Edwardsiella tarda
FL6-60]
Length = 309
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 159/351 (45%), Gaps = 68/351 (19%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R ++ +HP+N++ D A L + P+ FV + +G ID+ D A R L R LL
Sbjct: 11 RRQKAGLHPRNRH-HGRYDMAALCRISPALGDFVRATPNGGESIDFADPQAVRALNRALL 69
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
D+G+ W IP LCP +P R++Y+H++ DLL+S G + DIGTGANC
Sbjct: 70 AQDYGIAHWDIPAQFLCPPIPGRADYLHYLADLLASTRADGAIPRGAQTCVLDIGTGANC 129
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPLLG + GW F GSD++ AL A +++NP + I +R+ ++
Sbjct: 130 IYPLLGQAEYGWRFTGSDISAQALAAAAAIIRANPALGTRIRLRRQRQPQA--------- 180
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G+++ GE + +CN
Sbjct: 181 ------------------------------------------IFQGIIKAGEYYAATMCN 198
Query: 249 PPFFESMEEA-----------GLNPKTSC----GGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF S EA GL P + GG +E+ C GGE+AFI R+I +S A
Sbjct: 199 PPFHRSAAEAAAGSQRKLTNLGLRPPQAAMLNFGGKADELWCDGGEQAFILRMIAESRAF 258
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V R+ L L LR + V ++ QGQ +AW F
Sbjct: 259 ATQVGWFTSLVSRRETLPALRRALRAIPVKEMREVTMAQGQKVSRFIAWRF 309
>gi|399025117|ref|ZP_10727133.1| putative SAM-dependent methyltransferase [Chryseobacterium sp.
CF314]
gi|398078932|gb|EJL69811.1| putative SAM-dependent methyltransferase [Chryseobacterium sp.
CF314]
Length = 306
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 163/353 (46%), Gaps = 76/353 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++H +N + NP DF L S P + +VF + I+++ A + L + LL H
Sbjct: 4 EKSSLHTRNLH-RNPYDFDQLISCVPELKQYVFVNAYQTLTINFSIPKAVKLLNKALLQH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNI--IPTTSRNGDKVKGFDIGTGANC 128
+ + NW IP+ LCP +P R++YIH+I DLL+ IPT G V G DIGTGAN
Sbjct: 63 FYNIQNWDIPEANLCPPIPGRADYIHYIADLLAGQQGEIPT----GTSVTGLDIGTGANL 118
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YPL+ GW+ +G+D+ +LE A + + NP + I +++
Sbjct: 119 VYPLIAHQSYGWTMLGTDINQDSLENARQILDHNPDLC--IRLKQ--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+P S F ++ ++F F +CN
Sbjct: 162 --------------------QPDSDHIFK----------------NIIDIEDRFMFSLCN 185
Query: 249 PPFFESMEEA---------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF +S E A P + GG E+ C GGE AFIT++IE+S
Sbjct: 186 PPFHDSEESAIKGNMRKTKNISKSKSRKPLLNFGGQHSELWCEGGELAFITKMIEESALY 245
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
W+T +V +K NL L + L+KV V KT + QGQ LAW+F+P
Sbjct: 246 SSQVLWFTCLVSKKDNLYKLTTLLKKVNVAEFKTIDMAQGQKISRILAWTFIP 298
>gi|83943756|ref|ZP_00956214.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Sulfitobacter sp. EE-36]
gi|83845436|gb|EAP83315.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Sulfitobacter sp. EE-36]
Length = 308
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 162/350 (46%), Gaps = 76/350 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +HP+N ++E DFA L + P PF + G+ ID+ D A R L R LL D
Sbjct: 4 KTNLHPRNLHNEGY-DFARLIAALPELGPFTGPNPAGQTTIDFRDVAAVRMLNRALLKAD 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANC 128
+G+++W IP LCP +P R +YIH + DLL+ +N IP G ++K DIGTGA+
Sbjct: 63 YGIDFWDIPPNYLCPPIPGRVDYIHHLADLLARSNNNEIP----RGPQIKALDIGTGASL 118
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YPL G S GW F G D+ VA++ A++ K+N + +++R +N E
Sbjct: 119 VYPLTGQSAYGWQFTGVDIDPVAIKSAQQIAKAN---ALDVDLRLQENRED--------- 166
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ GV+ ++F +CN
Sbjct: 167 ------------------------------------------IFDGVIYPDDRFHVTLCN 184
Query: 249 PPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF SME A G + K + GG E+ C GGE FI +++ S A+
Sbjct: 185 PPFHASMERATKGTQRKWANLGKGRSGKLNFGGQNAELWCPGGEIRFIASMVDQSRAIAG 244
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V +K N++ L L+K V E QGQ +AW+F+
Sbjct: 245 QCLWFTSLVSKKDNVQTLYKILKKAKVANCDVVEMAQGQKTSRFIAWTFI 294
>gi|60682390|ref|YP_212534.1| SAM-dependent methyltransferase [Bacteroides fragilis NCTC 9343]
gi|81314549|sp|Q5LBA7.1|RLMF_BACFN RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|60493824|emb|CAH08615.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
Length = 305
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 162/355 (45%), Gaps = 74/355 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +N+++ DF+ L YP + F+ + G ID+ + A + L + LL+
Sbjct: 3 ERNELHKRNRHN-GQYDFSRLTEEYPPLKKFIVLNAYGTTSIDFFNPRAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI------IPTTSRNGDKVKGFDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ +I + T N + + DIG
Sbjct: 62 YYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPDISDESTGLKTAVPNTRQYRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVGSD+ V+++ A K V NP ++ IE+R +S
Sbjct: 122 GANCIYPIIGQTEYGWTFVGSDIDPVSIDNARKIVTCNPALAHKIELRLQRDSRK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFEGIIAPNEYFDV 190
Query: 245 CICNPPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRIIED 289
+CNPPF S EEA G K S GG E+ C GGE F+ +IE+
Sbjct: 191 TLCNPPFHSSKEEAEDGTLRKLSSLKGKKVTKAQLNFGGNANELWCEGGEFRFLLTMIEE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL L +KL+ + + E QG LAW F
Sbjct: 251 SRNYRKNCGWFTSLVSKEKNLGKLTAKLKSTDIAEHRIIEMHQGTKTSRILAWRF 305
>gi|86146780|ref|ZP_01065100.1| hypothetical protein MED222_15579 [Vibrio sp. MED222]
gi|85835430|gb|EAQ53568.1| hypothetical protein MED222_15579 [Vibrio sp. MED222]
Length = 447
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 170/382 (44%), Gaps = 95/382 (24%)
Query: 6 RRRRREERPT--IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
++RR E+P +HP+N+++ DF LL + P + + + G I+++D A +
Sbjct: 107 QKRRSAEKPQGGLHPRNQHTGRY-DFELLVAALPELKEHLIKNPVGEDTINFSDPLAVKL 165
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L + LL H +G+ W IP G LCP +P R++YIH + D+L+S+ N VK DI
Sbjct: 166 LNKALLAHHYGVKHWDIPAGYLCPPIPGRADYIHRVADILNSDG-QGEPYNHASVKALDI 224
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++GA+ W G+D+ V+++ A +SNP++ I R +SES
Sbjct: 225 GVGANCIYPIIGATEYKWRCTGTDVDPVSVKAANFIAESNPNLKGKIRARLQADSES--- 281
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ GV++D E++
Sbjct: 282 ------------------------------------------------IFKGVIKDNERY 293
Query: 243 DFCICNPPFFESMEEA---------------------GLNPKTSC--------------- 266
D ICNPPF S+EEA P+T+
Sbjct: 294 DVTICNPPFHSSLEEAEKGSQRKLDNLAANRAKKAGQSFKPETNKKPAKQDKSIKQEKPT 353
Query: 267 ---GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323
GG E+ C GGE AFI ++ +S W+T+++ +K N+ + S+L K+
Sbjct: 354 LNFGGQKSELWCPGGEAAFIMKMARESQLFATQVLWFTTLISKKDNVDMVRSELGKLRAK 413
Query: 324 IVKTTEFVQGQTCRWGLAWSFV 345
VK E QGQ +AW+F+
Sbjct: 414 QVKVVEMSQGQKVSRFIAWTFM 435
>gi|388471366|ref|ZP_10145575.1| hypothetical protein PseBG33_1073 [Pseudomonas synxantha BG33R]
gi|388008063|gb|EIK69329.1| hypothetical protein PseBG33_1073 [Pseudomonas synxantha BG33R]
Length = 339
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 165/351 (47%), Gaps = 78/351 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N+++ DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRHTGRY-DFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKSFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIY 130
+ W IP LCP VP R++Y+H++ DLL+S IP G VK DIG GANC+Y
Sbjct: 89 IQHWDIPADYLCPPVPGRADYVHFLADLLASVNDGKIP----RGSIVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G W+F+GS++ +A+ A+ V+SN +S++I++R+ N +
Sbjct: 145 PLIGYMEYRWNFLGSEVDPIAVSAAKAIVQSN-DLSKVIQLRQQPNPKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA +PK GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 AHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|431926387|ref|YP_007239421.1| SAM-dependent methyltransferase [Pseudomonas stutzeri RCH2]
gi|431824674|gb|AGA85791.1| putative SAM-dependent methyltransferase [Pseudomonas stutzeri
RCH2]
Length = 330
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 160/355 (45%), Gaps = 72/355 (20%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
R E + +HP+N+++ DF L + P V + G+ ID+ + +A R R L
Sbjct: 14 RAEAKAVLHPRNRHTGRY-DFPALIAGCPELAEHVIINPYGKQSIDFANPDAVRVFNRAL 72
Query: 69 LLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
L +G+ W IP G LCP VP R++Y+H + DLL+ N R G + DIGTGAN
Sbjct: 73 LRQFYGIQHWDIPPGYLCPPVPGRADYLHGLADLLAQNDASAIPR-GTAIHALDIGTGAN 131
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW F GSD+ AL A V +N +++ IE+R
Sbjct: 132 CIYPLIGHREYGWRFTGSDIDATALASAHTIVSAN-GLAKAIELR--------------- 175
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
++A P + G+V ++FD +C
Sbjct: 176 ------------------QQAAPKH------------------IFKGMVLPEDRFDLTLC 199
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S EA P + GG E+ C GGE AF+ R+ E+S
Sbjct: 200 NPPFHASQAEASSGSQRKWRNLGKLDPSRKLPALNFGGQAAELWCEGGEAAFVARMAEES 259
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++++V + +N+ L ++L+++G V T + QGQ +AW+F+
Sbjct: 260 ALFAGQVYWFSTLVSKGANVAPLEARLKRLGARQVHTLDMAQGQKKSRFVAWTFL 314
>gi|269104440|ref|ZP_06157136.1| hypothetical SAM-dependent methyltransferase [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268161080|gb|EEZ39577.1| hypothetical SAM-dependent methyltransferase [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 332
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 175/378 (46%), Gaps = 91/378 (24%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M SKK+ ++ +HP+N + DF L P FV + G ++++D A
Sbjct: 1 MSSKKQTTPKK---GLHPRNPHRARY-DFPQLTKALPELSQFVAKNPYGDLSVNFSDPMA 56
Query: 61 TRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDK 116
+ L + LL H + +++W IPDG LCP +P R++Y+H+I DLL+++ IP G +
Sbjct: 57 VKALNKALLKHFYQVDFWDIPDGFLCPPIPGRADYLHYIADLLAASNNGKIP----QGKR 112
Query: 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176
+KG D+G GANC+YP++G + GW F +D+ ++++ A+ V+SN + I++R
Sbjct: 113 IKGLDVGVGANCVYPIVGHRVYGWQFAAADIDPISIKSAKFIVESNASLKGQIQLR---- 168
Query: 177 SESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236
+Q ++N + ++
Sbjct: 169 ---------------LQKDANC--------------------------------IYTNMI 181
Query: 237 RDGEQFDFCICNPPFFESMEEA-------------------GL---------NPKTSCGG 268
+ + FDF +CNPPF S+EEA G+ P + GG
Sbjct: 182 KPTDLFDFTMCNPPFHSSLEEATAGSERKVRNLAANTKKRTGIKVDANNNNSKPVLNFGG 241
Query: 269 TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328
E+ C GGE AFI R+I+ S W+T++V +K L + L+++ VKT
Sbjct: 242 QKAELWCPGGEAAFIQRMIKQSAEHSAQCLWFTTLVSKKETLPLVYQALKEIKAADVKTI 301
Query: 329 EFVQGQTCRWGLAWSFVP 346
E QGQ +AW+F+P
Sbjct: 302 EMSQGQKITRIVAWTFLP 319
>gi|381405173|ref|ZP_09929857.1| 23S rRNA mA1618 methyltransferase [Pantoea sp. Sc1]
gi|380738372|gb|EIB99435.1| 23S rRNA mA1618 methyltransferase [Pantoea sp. Sc1]
Length = 310
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 163/351 (46%), Gaps = 75/351 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
H +N++ + DFA L + +P V + G +D+ D A L + L+ + +
Sbjct: 10 FHARNRH-QGEYDFAALTAAHPPLAAKVRPNGYGLQSVDFADPEAVMLLNQALIKLFYDI 68
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
+W + G LCP VP R++Y+H++ DLL+ + +IP D+G GANCIYPL
Sbjct: 69 DWQLAPGSLCPPVPGRADYLHYLADLLALDNNGVIPAADV-------LDVGCGANCIYPL 121
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+GA+ GW F G+++ +VAL+ A + + +NP ++ I +R+ NS++
Sbjct: 122 IGAAEYGWRFTGTEINEVALKAANRILAANPRLTRQIRLRRQKNSDA------------- 168
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
VL GV+ E F +CNPPF
Sbjct: 169 --------------------------------------VLAGVISKNEFFSAVMCNPPFH 190
Query: 253 ESM-----------EEAGLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
S GL+ + GG E+ GGE+AFI R+I +SVA + W
Sbjct: 191 ASAEEAAAGSQRKSRNLGLDKAAPLNFGGQHNELWYPGGEKAFIGRMIAESVAFGRQIGW 250
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+TS+V RK NL L +L+ + V V+ QGQ LAWSF+P A++
Sbjct: 251 FTSLVSRKENLPALEKQLQALDVAEVRVVNMAQGQKQSRFLAWSFMPAAQR 301
>gi|238920487|ref|YP_002934002.1| Protein of unknown function (DUF890) [Edwardsiella ictaluri 93-146]
gi|238870056|gb|ACR69767.1| Protein of unknown function (DUF890) [Edwardsiella ictaluri 93-146]
Length = 309
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 159/351 (45%), Gaps = 68/351 (19%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R ++ +HP+N++ D A+L + P+ FV + G ID+ D A R L R LL
Sbjct: 11 RHQKAGLHPRNRH-HGRYDMAVLCRISPALGAFVRVTPGGGESIDFADPQAVRALNRALL 69
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
D+G+ W IP LCP +P R++Y+H++ DLL+S G + DIGTGANC
Sbjct: 70 AQDYGIAHWDIPAQFLCPPIPGRADYLHYLADLLASTRSDGAIPRGAQTCVLDIGTGANC 129
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPLLG + GW F GSD++ AL A +++NP + I +R+ ++
Sbjct: 130 IYPLLGQAEYGWRFTGSDISAQALAAAAAIIRANPALGTRIRLRRQRQPQA--------- 180
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G+++ GE + +CN
Sbjct: 181 ------------------------------------------IFQGIIKAGEYYAATMCN 198
Query: 249 PPFFESMEEA-----------GLNPKTSC----GGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF S EA GL P + GG +E+ C GGE+AFI R+I +S A
Sbjct: 199 PPFHRSAAEAAAGSQRKLTNLGLRPPQAARLNFGGRADELWCDGGEQAFILRMIAESRAF 258
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V R+ L L LR + V ++ QGQ +AW F
Sbjct: 259 ATQVGWFTSLVSRRETLPALRRALRAIPVQEMREVTMAQGQKVSRFIAWRF 309
>gi|86140167|ref|ZP_01058729.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Roseobacter sp. MED193]
gi|85823104|gb|EAQ43317.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Roseobacter sp. MED193]
Length = 308
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 158/351 (45%), Gaps = 78/351 (22%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +HP+N++SE DF+ L + P + GR ID+ D NA R L R LL
Sbjct: 4 KTKLHPRNQHSEGY-DFSRLLAQTPELAACTILNPAGRSTIDFQDVNAVRMLNRALLKAH 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ +++W IPDG LCP +P R +YIH++ DLL+ R G ++K DIGTGA+ +YP
Sbjct: 63 YDIDFWDIPDGYLCPAIPGRVDYIHYLADLLADGNNQEVPR-GREIKILDIGTGASLVYP 121
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL----IEIRKVDNSESTPSIQESL 187
L G S GW F G D+ A +KS I EL I +R+ N ES
Sbjct: 122 LTGQSEYGWHFTGVDIDAGA-------IKSAQRICELNRLEISLRRQSNPES-------- 166
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ GV+R + F +C
Sbjct: 167 -------------------------------------------IFRGVIRPKDVFHATLC 183
Query: 248 NPPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF S+E+A G + K + GG E+ C GGE F++R+IE S+
Sbjct: 184 NPPFHGSLEQAHKGSQRKWANLGKGHSTKFNFGGQNAELWCPGGEIGFVSRMIEQSLEFA 243
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T +V +K NL L L+K V+ K E QGQ +AW+F+
Sbjct: 244 DQCHWFTCLVSKKDNLPPLRRVLKKARVSDYKIVEMAQGQKISRFIAWTFL 294
>gi|365105472|ref|ZP_09334719.1| ribosomal RNA large subunit methyltransferase F [Citrobacter
freundii 4_7_47CFAA]
gi|363643487|gb|EHL82805.1| ribosomal RNA large subunit methyltransferase F [Citrobacter
freundii 4_7_47CFAA]
Length = 308
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 74/349 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N+++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 5 KPGLHPRNRHNGRY-DLATLCQVTPELTQFLTLTPGGEQSVDFANPQAVKALNKALLAHF 63
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANCI 129
+ + NW IPDG LCP VP R++YIH + DLLS S IP + D+G GANCI
Sbjct: 64 YAVKNWDIPDGFLCPPVPGRADYIHHLADLLSETSGTIPANA------SVLDVGVGANCI 117
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
YPL+G GW F GS+ + A A+ V +NP ++ I +R+
Sbjct: 118 YPLIGVHEYGWRFTGSETSSEAFNSAQAIVNANPGLTRAIRLRR---------------- 161
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
+ +++ FN G++ EQ++ +CNP
Sbjct: 162 -------------------QKDATAIFN----------------GIIHKNEQYETTLCNP 186
Query: 250 PFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
PF +S A + + GG +E+ C GGE AFI ++I +S A +
Sbjct: 187 PFHDSAASARAGSERKRRNLGQDKDDALNFGGQQQELWCEGGEVAFIKKMIAESQAFGRQ 246
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L G V E QGQ +AW+F+
Sbjct: 247 VMWFTTLVSRGENLPPLYHALTDAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|452746503|ref|ZP_21946322.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri NF13]
gi|452009604|gb|EME01818.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri NF13]
Length = 331
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 161/351 (45%), Gaps = 72/351 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +HP+N+++ DF L + P +V + + ID+ + +A R R LL
Sbjct: 19 KAVLHPRNRHTGRY-DFPALIAGCPELAEYVILNPYRKQSIDFANPDAVRVFNRALLRQF 77
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ W IP G LCP VP R++Y+H + DLL + R G ++ DIGTGANCIYP
Sbjct: 78 YGIQHWDIPPGYLCPPVPGRADYLHGLADLLGGHEARAIPR-GAAIRALDIGTGANCIYP 136
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G GW F GSD+ AL A V +N +++ IE+R
Sbjct: 137 LIGHREYGWRFTGSDIDATALASARTIVSAN-GLAKAIELR------------------- 176
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
++A P + GV+ ++FD +CNPPF
Sbjct: 177 --------------QQAAPKH------------------IFKGVMLPEDRFDLTLCNPPF 204
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S EA P + GG E+ C GGE AFI R+ E+SVA
Sbjct: 205 HASQAEASSGSQRKWRNLGKLDPSRKLPALNFGGQAAELWCEGGEAAFIARMAEESVAFA 264
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++++V + +N+ L+++L+++G V T + QGQ +AW+F+
Sbjct: 265 GQVYWFSTLVSKGANVAPLVTRLKRLGARQVHTLDMAQGQKKSRFIAWTFL 315
>gi|424921546|ref|ZP_18344907.1| SAM-dependent methyltransferase [Pseudomonas fluorescens R124]
gi|404302706|gb|EJZ56668.1| SAM-dependent methyltransferase [Pseudomonas fluorescens R124]
Length = 339
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVITNPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP VP R++Y+H++ DLL+S R G + DIG GANC+Y
Sbjct: 86 FYGIEHWDIPADYLCPPVPGRADYVHFLADLLASMNDGKVPR-GAIINVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A V+SN ++++I++R+ +N +
Sbjct: 145 PLIGNSEYRWHFLGSEIDPTAVAAARAIVQSN-DLNKVIKLRQQENRKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILIGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F SMEEA +PK GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMEEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESANF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|389738037|gb|EIM79242.1| hypothetical protein STEHIDRAFT_126591 [Stereum hirsutum FP-91666
SS1]
Length = 529
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 147/300 (49%), Gaps = 66/300 (22%)
Query: 62 RELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIP--TTSRNGD---- 115
R LT LL D L IP +LCPTVPNR NYI W+EDLL+S P T+S NG
Sbjct: 4 RRLTEALLYRDFNLVVTIPQDRLCPTVPNRLNYILWLEDLLTSTAPPQITSSGNGPISSR 63
Query: 116 --KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNV-KSNPHISELIEI 171
+G DIG GA+ IYPLL + W+ VG+D+ ++L+ AE+N+ KSN ++ I I
Sbjct: 64 QMSCRGIDIGLGASAIYPLLACRISSNWTMVGTDIDAMSLQSAERNIAKSN--LTSRISI 121
Query: 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231
K ++ G ++ PS S F
Sbjct: 122 IK----------SQTTAGATI----------------FPSQLSDFRESC----------- 144
Query: 232 LVGVVRDGEQFDFCICNPPFF-------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFIT 284
FDF +CNPPF+ S + P C G EM+ GGE AF+
Sbjct: 145 ----------FDFTMCNPPFYSSKVDVSRSAQGKSTGPNAVCTGADVEMITHGGEAAFVR 194
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
R++++S L+ RWYTSM+G+ S+L ++ LR+ + TEFVQGQT RW +AWSF
Sbjct: 195 RMVQESFLLRDRCRWYTSMLGKLSSLAEIVEALRENKIDNYAITEFVQGQTRRWAIAWSF 254
>gi|418843190|ref|ZP_13397989.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19443]
gi|418859583|ref|ZP_13414185.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
gi|418861911|ref|ZP_13416461.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19536]
gi|418869073|ref|ZP_13423514.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 4176]
gi|392817328|gb|EJA73243.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19443]
gi|392829777|gb|EJA85438.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
gi|392837150|gb|EJA92721.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19536]
gi|392837763|gb|EJA93333.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 4176]
Length = 308
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNESYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|378952622|ref|YP_005210110.1| ribosomal RNA large subunit methyltransferase F [Pseudomonas
fluorescens F113]
gi|359762636|gb|AEV64715.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
fluorescens F113]
Length = 319
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 169/357 (47%), Gaps = 72/357 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ A R R LL
Sbjct: 5 EKASLHPRNRH-QGRYDFPALIKSTPELAKFVIINPYGKESIDFASPEAVRVFNRALLKA 63
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S+ R G VK DIGTGANC+Y
Sbjct: 64 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASHNAGEIPR-GAAVKVLDIGTGANCVY 122
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 123 PLIGHSDYRWHFLGSEIDPTAIASAKAIVQSN-GLNKAIQLRQQANRKQ----------- 170
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ D E+FD +CNPP
Sbjct: 171 ----------------------------------------ILLGLLEDTERFDLTMCNPP 190
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F S++EA +PK GG E+ C GGE F+T++I +S L
Sbjct: 191 FHASLDEATKGSQRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEARFVTQLIGESAQL 250
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W++++V + SNL + + L+K G + E QGQ +AW+F A++
Sbjct: 251 AGQVLWFSTLVSKASNLPAIQTALKKAGALHSQVVEMSQGQKQSRFVAWTFQTEAQQ 307
>gi|423093737|ref|ZP_17081533.1| hypothetical protein PflQ2_0991 [Pseudomonas fluorescens Q2-87]
gi|397887344|gb|EJL03827.1| hypothetical protein PflQ2_0991 [Pseudomonas fluorescens Q2-87]
Length = 341
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKSTPELARFVIINPYGKESIDFASPEAVRVFNRALLKS 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+ + R G VK D+GTGANC+Y
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLAEHNEGEIPR-GAAVKVLDVGTGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGHSDYRWHFLGSEIDPTAIASAKAIVQSN-GLNKAIQLRQQANRKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ D E+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEDAERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F S+EEA +PK GG E+ C GGE F+T++I +S L
Sbjct: 213 FHASLEEATRGSQRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEARFVTQLIGESAQL 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K G + E QGQ +AW+F
Sbjct: 273 AGQVLWFSTLVSKASNLPAIQAALKKAGAVHSQVVEMSQGQKQSRFVAWTF 323
>gi|313148303|ref|ZP_07810496.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137070|gb|EFR54430.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 302
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 162/352 (46%), Gaps = 71/352 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +NK++ DF+ L YP + FV + G ID+ + A + L + LL+
Sbjct: 3 ERNELHKRNKHN-GQYDFSRLMEEYPPLKKFVAPNAYGTTSIDFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS-SNIIPT--TSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++YIH+I DL+ N I T ++ + DIG GAN
Sbjct: 62 CYGIRYWDIPKNYLCPPIPGRADYIHYIADLIQPGNPIQTEAATKATRPCRCLDIGVGAN 121
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYP++G + GW+FVGSD+ ++++ A K V NP ++ IE+R +S
Sbjct: 122 CIYPIIGQTEYGWTFVGSDIDPISIDNARKIVTCNPALTHKIELRLQRDSRK-------- 173
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ G++ E FD IC
Sbjct: 174 -------------------------------------------IFEGIIAPDEYFDVTIC 190
Query: 248 NPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S EEA + + GG E+ C GGE F+ +IE+S
Sbjct: 191 NPPFHSSREEAENGTLRKLSNLKGRKITKARLNFGGNANELWCEGGELRFLLTMIEESRN 250
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++ W+TS+V ++ NL L +KL+ VG++ + E QG L W F
Sbjct: 251 YRKNCGWFTSLVSKEKNLGKLTAKLKSVGISEHRIIEMHQGSKTSRILTWRF 302
>gi|389683595|ref|ZP_10174927.1| hypothetical protein PchlO6_1057 [Pseudomonas chlororaphis O6]
gi|388553108|gb|EIM16369.1| hypothetical protein PchlO6_1057 [Pseudomonas chlororaphis O6]
Length = 341
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 169/360 (46%), Gaps = 78/360 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DFA L P FV + G+ ID+ + A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFAQLIKSTPELGAFVIINPYGKESIDFANPAAVRVFNRALLKA 85
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ W IP LCP VP R++Y+H++ DLL+++ +IP G V+ DIG GAN
Sbjct: 86 FYGIAHWDIPADFLCPPVPGRADYVHFLADLLAAHNEGVIP----RGAAVRVLDIGVGAN 141
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G S W F+GSD+ AL A+ V++N +++ I +R+ N +
Sbjct: 142 CIYPLIGHSDYRWQFLGSDIDTTALAAAKAIVQAN-GLNKAIGLRQQANRKQ-------- 192
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L+G++ E+FD +C
Sbjct: 193 -------------------------------------------ILLGLLESDERFDLTLC 209
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S+EEA P + GG E+ C GGE F+T++I +S
Sbjct: 210 NPPFHASLEEATRGSQRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEARFVTQLIGES 269
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ Q W++++V + SNL + + L+K G + E QGQ +AW+F A++
Sbjct: 270 AQVAQQVLWFSTLVSKASNLPAIQAALKKAGALESQVVEMSQGQKQSRFVAWTFKDKAQQ 329
>gi|145599209|ref|YP_001163285.1| putative SAM-dependent methyltransferase [Yersinia pestis Pestoides
F]
gi|205829623|sp|A4TM00.1|RLMF_YERPP RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|145210905|gb|ABP40312.1| hypothetical protein YPDSF_1929 [Yersinia pestis Pestoides F]
Length = 336
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 161/355 (45%), Gaps = 76/355 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G +D+ D A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 83 HFYGIEYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIP----KGKNIALLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLK-------------- 184
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
++ +P + + GV E++D +
Sbjct: 185 -------------------QQKDPHA------------------IFEGVWAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
VA Q W+TS++ +K+ L + LR V V+T E QGQ +AW+F+
Sbjct: 268 VAKAQNCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSRFVAWTFL 322
>gi|401676615|ref|ZP_10808599.1| 23S rRNA methyltransferase [Enterobacter sp. SST3]
gi|400216299|gb|EJO47201.1| 23S rRNA methyltransferase [Enterobacter sp. SST3]
Length = 303
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 162/355 (45%), Gaps = 83/355 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ AL S P + ++ + G P +++ D A + L + LL H
Sbjct: 4 QKPGLHPRNRHRSRYDMNALCLSC-PPLKDYIVQTPAGEPSVNFADPQAVKMLNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ NW IP+G LCP VP R++Y+H + DLL+ + IIP + DIGTGAN
Sbjct: 63 YYGVANWDIPEGFLCPPVPGRADYLHHLADLLAEDRDGIIP------QQATVLDIGTGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPL+GA W F GS++ A A+ + +NP +S I +R+
Sbjct: 117 LIYPLIGAHEYHWRFTGSEIGAEAFASAQAIINANPGLSRAIRLRR-------------- 162
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ ++S FN G++ E +D +C
Sbjct: 163 ---------------------QKEAASIFN----------------GIIHKNETYDATMC 185
Query: 248 NPPFFES-----------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF +S E+A LN GG +E+ C GGE AFI R+I +S
Sbjct: 186 NPPFHDSAAAARAGSERKRRNLGQAEDAALN----FGGQQQELWCEGGEVAFILRMIAES 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ +W+T++V R NL L L + G V E QGQ +AWSF+
Sbjct: 242 KQFGRQVKWFTTLVSRGDNLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWSFM 296
>gi|218709668|ref|YP_002417289.1| SAM-dependent methyltransferase [Vibrio splendidus LGP32]
gi|218322687|emb|CAV18863.1| hypothetical protein VS_1679 [Vibrio splendidus LGP32]
Length = 450
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 167/379 (44%), Gaps = 92/379 (24%)
Query: 6 RRRRREERPT--IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
++RR E+P +HP+N+++ DF LL + P + + + G ++++D A +
Sbjct: 113 QKRRSAEKPQGGLHPRNQHTGRY-DFELLVAALPELKEHLIKNPVGEDTVNFSDPLAVKL 171
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L + LL H +G+ W IP G LCP +P R++YIH + D+L+S+ N VK DI
Sbjct: 172 LNKALLAHHYGVKHWDIPAGYLCPPIPGRADYIHRVADILNSDG-QGEPYNHASVKALDI 230
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++GA+ W G+D+ V+++ A +SNP++ I R +SES
Sbjct: 231 GVGANCIYPIIGATEYKWRCTGTDVDSVSIKTANFIAESNPNLKGKIRARLQADSES--- 287
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ GV++D E++
Sbjct: 288 ------------------------------------------------IFKGVIKDNERY 299
Query: 243 DFCICNPPFFESMEEAGL------------------------------------NPKTSC 266
D ICNPPF S+EEA P +
Sbjct: 300 DVTICNPPFHSSLEEAEKGSQRKLDNLAANRAKKAGKSFKPEMNKKPAKSIKQEKPTLNF 359
Query: 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326
GG E+ C GGE FI ++ +S W+T+++ +K N+ + S+L K+ VK
Sbjct: 360 GGQKSELWCPGGEATFIMKMARESQLFATQVLWFTTLISKKDNVDMVRSELGKLRAKQVK 419
Query: 327 TTEFVQGQTCRWGLAWSFV 345
E QGQ +AW+F+
Sbjct: 420 VVEMSQGQKVSRFIAWTFM 438
>gi|194753253|ref|XP_001958931.1| GF12312 [Drosophila ananassae]
gi|190620229|gb|EDV35753.1| GF12312 [Drosophila ananassae]
Length = 308
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 166/350 (47%), Gaps = 68/350 (19%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
+ ++ ++ +H +N + PD+ LA Y F +G+ +++ + RELT
Sbjct: 3 KNKQNSKKFGMHLRNVLRQ-APDYTKLAIKYKDFRNVCSLELNGKVSVNFRNERTLRELT 61
Query: 66 RVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG 125
++LL LN G L PT+ R NYI WIEDLL S + D++KG DIG G
Sbjct: 62 KMLLTEYFDLNVDFAPGSLVPTLALRLNYILWIEDLLESFKL-------DQIKGIDIGCG 114
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
++CIY LLGA W + + +E+A +NVK N H+ +L+E+
Sbjct: 115 SSCIYSLLGAKKNNWKMLALESKPENIEYARENVKRN-HLEDLVEVF------------- 160
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
A+P ++ F SY + + FC
Sbjct: 161 ----------------------AQPDNTCIF-------KSYFEQDT------KEQMYHFC 185
Query: 246 ICNPPFFESME-----------EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
+CNPPFF+S E P + G+ EE+ C+GGE F+ RI+++S+ K
Sbjct: 186 LCNPPFFDSNSPNPFGANTRNPERRPAPNNARTGSQEELTCAGGEVQFVQRIVDESLENK 245
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
R +TSM+G K+N+ ++ L++ G+T V TTEF QG T RW +AWSF
Sbjct: 246 LCVRIFTSMLGVKANVPRILEYLKEKGLTNVSTTEFHQGHTTRWAVAWSF 295
>gi|398842391|ref|ZP_10599575.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM102]
gi|398898282|ref|ZP_10648225.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM50]
gi|398105868|gb|EJL95940.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM102]
gi|398184472|gb|EJM71922.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM50]
Length = 340
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+Y
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPR-GAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAVAAAKAIVQSN-GLNKAIQLRQQSNPKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIQTALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|423690136|ref|ZP_17664656.1| hypothetical protein PflSS101_1073 [Pseudomonas fluorescens SS101]
gi|387998565|gb|EIK59894.1| hypothetical protein PflSS101_1073 [Pseudomonas fluorescens SS101]
Length = 338
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 164/351 (46%), Gaps = 78/351 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N+++ DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRHTGRY-DFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKSFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIY 130
+ W IP LCP VP R++Y+H++ DLL+S IP G VK D+G GANC+Y
Sbjct: 89 IQHWDIPADYLCPPVPGRADYVHFLADLLASVNEGKIP----RGSIVKVLDVGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G W+F+GS++ +A+ A+ V+SN +S++I++R+ N +
Sbjct: 145 PLIGYMEYRWNFLGSEVDPIAVSAAKAIVQSN-DLSKVIQLRQQPNPKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 AHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|398859330|ref|ZP_10615007.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM79]
gi|398237025|gb|EJN22788.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM79]
Length = 340
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+Y
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPR-GAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAVAAAKAIVQSN-GLNKAIQLRQQSNPKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIQTALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|392420129|ref|YP_006456733.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri CCUG 29243]
gi|390982317|gb|AFM32310.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri CCUG 29243]
Length = 331
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 161/356 (45%), Gaps = 72/356 (20%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
R + +HP+N+++ DF L + P +V + G+ ID+ + +A R R
Sbjct: 14 RAEPGKAVLHPRNRHTGRY-DFPALIAGCPELVEYVILNPYGKQSIDFANPDAVRVFNRA 72
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGA 126
LL +G+ W IP G LCP VP R++Y+H + DLL N R G + DIGTGA
Sbjct: 73 LLRQFYGIQHWDIPPGYLCPPVPGRADYLHGLADLLGQNDACAIPR-GTAIHALDIGTGA 131
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+G GW F GSD+ AL A V +N +++ IE+R
Sbjct: 132 NCIYPLIGHREYGWHFTGSDIDTTALASARTIVSAN-GLAKAIELR-------------- 176
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
++A P + G+V ++FD +
Sbjct: 177 -------------------QQAAPKH------------------IFKGMVLPEDRFDLTL 199
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S EA P + GG E+ C GGE AF+ R+ E+
Sbjct: 200 CNPPFHASQAEASSGSQRKWRNLGKLDPSRKLPALNFGGQAAELWCEGGEAAFVARMAEE 259
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
SVA W++++V + +N+ L ++L+++G + T + QGQ +AW+F+
Sbjct: 260 SVAFAGQVYWFSTLVSKGANVAPLEARLKRLGARQMHTLDMAQGQKKSRFVAWTFL 315
>gi|354722666|ref|ZP_09036881.1| 23S rRNA mA1618 methyltransferase [Enterobacter mori LMG 25706]
Length = 303
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 161/355 (45%), Gaps = 83/355 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N+++ AL S P + F+ + G P +++ D A + L + LL H
Sbjct: 4 QKPGLHPRNRHNSRYDMKALCLSC-PQLQDFIVQTPAGEPSVNFADPLAVKTLNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGAN 127
+G+ W IP+G LCP VP R++Y+H++ DLL+ ++P + DIGTGAN
Sbjct: 63 FYGVTHWDIPEGFLCPPVPGRADYVHYLADLLAEGNDGVVP------QQATILDIGTGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPL+GA W F GS++ A A+ + +NP ++ I +R+ + +S
Sbjct: 117 LIYPLIGAHEYQWRFTGSEIGTEAFASAQAIINANPGLTRAIRLRRQKDDKS-------- 168
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ G++ EQ+D +C
Sbjct: 169 -------------------------------------------IFNGIIHKNEQYDATMC 185
Query: 248 NPPFFES-----------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF +S E+A LN GG +E+ C GGE AFI R+I +S
Sbjct: 186 NPPFHDSAATARAGSERKRRNLGQAEDAALN----FGGQQQELWCEGGEVAFILRMIAES 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ +W+TS+V R NL L L + G V E QGQ +AW+F+
Sbjct: 242 KQFGRQVKWFTSLVSRGDNLPPLYRALTEAGAVKVVKKEMSQGQKQSRFIAWTFM 296
>gi|145298311|ref|YP_001141152.1| SAM-dependent methyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|205829544|sp|A4SKI2.1|RLMF_AERS4 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|142851083|gb|ABO89404.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 325
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 157/360 (43%), Gaps = 72/360 (20%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
+G + + + +HP+N++ + P DF L P P VF + G +D+ D A
Sbjct: 6 LGRPSMKTHSDRKSGLHPRNRH-QAPYDFDALCLRTPELRPLVFVNEHGTQTLDFADPAA 64
Query: 61 TRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKV 117
+ L + LL +G+ W +P G LCP +P R +Y+H + DLL S+ +PT G V
Sbjct: 65 VKALNKALLALHYGIAHWDLPAGYLCPPIPGRVDYLHRVADLLAESAGCVPT----GKGV 120
Query: 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177
+ DIG GANCIYPLLGA GW FVGSD+ V+++ A KSN + IE R N+
Sbjct: 121 RVLDIGVGANCIYPLLGAREYGWRFVGSDIDPVSVKAAALLAKSN-GLGGQIECRHQGNA 179
Query: 178 ESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR 237
+ V G++
Sbjct: 180 KH---------------------------------------------------VFRGIIS 188
Query: 238 DGEQFDFCICNPPFFESMEEAGLN------------PKTSCGGTPEEMVCSGGERAFITR 285
E+F +CNPPF S++EA P + GG E+ C GGE F+
Sbjct: 189 PQERFALTLCNPPFHGSLDEASKGSERKLGKTVQGQPVLNFGGQKAELWCEGGEAGFLAT 248
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+I S W++S+V +K NL L +VG V+ + QG LAWSF+
Sbjct: 249 MIVQSKEFAAQCLWFSSLVSKKENLPAAKKALAQVGARQVRVIDMAQGNKVSRILAWSFL 308
>gi|167031997|ref|YP_001667228.1| putative SAM-dependent methyltransferase [Pseudomonas putida GB-1]
gi|205829569|sp|B0KQK4.1|RLMF_PSEPG RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|166858485|gb|ABY96892.1| protein of unknown function DUF890 [Pseudomonas putida GB-1]
Length = 316
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 167/358 (46%), Gaps = 72/358 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 3 EKPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKA 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP +P R++YIH DLL+ + + G +V+ DIG GANCIY
Sbjct: 62 QYGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGEVPK-GAQVRALDIGVGANCIY 120
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 121 PLLGHSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAIILRQQANRAH----------- 168
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++++GE+FD +CNPP
Sbjct: 169 ----------------------------------------ILSGLLQEGERFDLTLCNPP 188
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F S +EA P + GG E+ C GGE F+++++ +SV
Sbjct: 189 FHASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFVSQLVGESVQY 248
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKI 351
+ W+TS+V + SNL + + L+K G V+ E QGQ +AWSF A ++
Sbjct: 249 AERVLWFTSLVSKASNLPGIEAALKKAGAKAVRIIEMGQGQKQSRMVAWSFHDAAARL 306
>gi|419794533|ref|ZP_14320145.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392614835|gb|EIW97279.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
Length = 308
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKTLLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLSPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|383114886|ref|ZP_09935647.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
D2]
gi|313693407|gb|EFS30242.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
D2]
Length = 309
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 166/355 (46%), Gaps = 74/355 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +H +NK++ DF+LL YP + FV + G I++ + A + L + LL+
Sbjct: 3 KKGELHIRNKHN-GQYDFSLLMENYPPLKRFVSLNPLGIQTINFFNPQAVKALNKALLVT 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN----IIPTTSRNGDKVKG--FDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ N +P NG K K DIG
Sbjct: 62 YYGIRYWDIPKQYLCPPIPGRADYIHYIADLIQPNGTTPDLPAGDANGQKSKCRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVG+D+ V++E A K V NP ++ I++R +S+
Sbjct: 122 GANCIYPIIGHTEYGWTFVGTDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSKK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFDGIIMPDEYFDV 190
Query: 245 CICNPPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRIIED 289
ICNPPF S EEA G K S GG+ E+ C GGE F+ +I +
Sbjct: 191 TICNPPFHSSREEAEDGTLRKLSSLKGTKINKVQLNFGGSANELWCEGGEVRFLLNMISE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL+ L +KL+ V V+ K QG LAW F
Sbjct: 251 SQKYQKNCGWFTSLVSKEKNLEKLYAKLKSVNVSEYKVIRMQQGTKSSRILAWRF 305
>gi|455643926|gb|EMF23047.1| 23S rRNA mA1618 methyltransferase [Citrobacter freundii GTC 09479]
Length = 308
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 157/350 (44%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N+++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHNGRY-DLATLCQITPELTQFLTLTPGGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL +S IP + DIG GANC
Sbjct: 63 FYAVKNWDIPDGFLCPPVPGRADYIHHLADLLGETSGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + A A+ + NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSESSSEAFNSAQAIINGNPGLTRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +S+ FN G++ EQ++ +CN
Sbjct: 162 --------------------QKDASAIFN----------------GIIHKNEQYEATLCN 185
Query: 249 PPFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A + + GG +E+ C GGE AFI ++I +S A +
Sbjct: 186 PPFHDSAASARAGSERKRRNLGQDKDDALNFGGQQQELWCEGGEVAFIKKMIVESQAFGR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L G V E QGQ +AW+F+
Sbjct: 246 QVMWFTTLVSRGENLPPLYHALTDAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|291616832|ref|YP_003519574.1| hypothetical protein PANA_1279 [Pantoea ananatis LMG 20103]
gi|386015195|ref|YP_005933475.1| SAM-dependent methyltransferase YbiN [Pantoea ananatis AJ13355]
gi|291151862|gb|ADD76446.1| YbiN [Pantoea ananatis LMG 20103]
gi|327393257|dbj|BAK10679.1| SAM-dependent methyltransferase YbiN [Pantoea ananatis AJ13355]
Length = 328
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 163/359 (45%), Gaps = 76/359 (21%)
Query: 9 RREERPTI-HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
++ P++ H +N++ + DFA L + +P V + G +D+ D A L +
Sbjct: 23 KKSASPSLFHARNRH-QGEYDFAALTAAHPPLAAKVRPNGYGVMSVDFADPEAVMLLNQA 81
Query: 68 LLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGT 124
LL +GL+W + G LCP VP R++Y+H++ DLL+ +P+ DIG
Sbjct: 82 LLKLFYGLDWQLAPGSLCPPVPGRADYLHYLADLLALDNQGRVPSADV-------LDIGC 134
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYPL+GA+ GW F G+++ D AL+ A K V +N +S LI +R+ N ++
Sbjct: 135 GANCIYPLIGAAEYGWRFTGTEIDDAALKAAGKIVAANAGMSRLIRLRRQKNPQA----- 189
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
VL GVV G F
Sbjct: 190 ----------------------------------------------VLNGVVNKGAFFHA 203
Query: 245 CICNPPFFESM-----------EEAGLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSV 291
ICNPPF S GL + GG E+ C GGE+AF+ ++I +S
Sbjct: 204 VICNPPFHASAAEAAAGSQRKSRNLGLQQSAPLNFGGQHNELWCEGGEKAFVGKMIAESA 263
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W+TS+V RK +L L +L+ + +V+ QGQ LAWSF+ A++
Sbjct: 264 GLASQVVWFTSLVSRKEHLPALEKQLQALDTAVVRVVNMAQGQKQSRFLAWSFMSAAQR 322
>gi|402083142|gb|EJT78160.1| hypothetical protein GGTG_03262 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 497
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 167/325 (51%), Gaps = 70/325 (21%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
++D+TD + +LT+ L D GL+ +P +LCP V NR NYI W+++LL S+ +
Sbjct: 83 QLDFTDPVSVVQLTKSTLKRDFGLHIELPADRLCPPVHNRHNYILWLKELLDSS---SYD 139
Query: 112 RNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171
+ G ++ G DIGTGA+CIYPLLG + W F+ +D+ + +L WA +NVK N + +
Sbjct: 140 KPGGRLSGLDIGTGASCIYPLLGCTQRPWEFIATDLDEKSLAWAAENVKRNGLEHRIRLV 199
Query: 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231
R+ + + P I +DE
Sbjct: 200 RR--HRPTDPLIP-------------------LDE------------------------- 213
Query: 232 LVGVVRDGEQFDFCICNPPFFESMEE----AGLN---PKTSCGGTPEEMVCSGGERAFIT 284
+GV + DF + NPPF+ES +E AG P ++C G P EMVC GGE F+
Sbjct: 214 -LGV----DAVDFVMTNPPFYESPDELRHLAGNKARPPPSACTGAPVEMVCDGGEVGFVG 268
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI------VKTTEFVQG-QTCR 337
R++++S+AL+ RWYT+M+G+ S+L+ L+ +LR EFVQG +T R
Sbjct: 269 RMLDESLALRGRARWYTAMLGKLSSLEVLVGRLRGGAGVAAARGGNYAVAEFVQGARTRR 328
Query: 338 WGLAWSFVP--PARKIISPHVAEKK 360
W +AW+F P P++ VAE K
Sbjct: 329 WAVAWTFGPMRPSQAAARGSVAELK 353
>gi|407366283|ref|ZP_11112815.1| 23S rRNA mA1618 methyltransferase [Pseudomonas mandelii JR-1]
Length = 340
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+Y
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPR-GAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAVAAAKAIVQSN-GLNKAIQLRQQSNPKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPSIQTALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|158300807|ref|XP_320636.4| AGAP011889-PA [Anopheles gambiae str. PEST]
gi|157013339|gb|EAA00148.4| AGAP011889-PA [Anopheles gambiae str. PEST]
Length = 476
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 154/343 (44%), Gaps = 69/343 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N+Y + P +F L Y G+ R+D+ + A L++ LLL D GL
Sbjct: 7 MHPRNRYRQRP-NFQQLVKQYSELNEVASVDLAGKVRLDYRNKRAVHLLSKCLLLRDFGL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P +L PT+P R NYIHW+ED+ + V+G DIG GA+CIYPLL
Sbjct: 66 KLELPPDKLVPTLPLRLNYIHWLEDI--GTVARWEQERKQPVRGIDIGCGASCIYPLLAV 123
Query: 136 --SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
S W V + ++E A+ NV N + IE++
Sbjct: 124 VQSNKHWHMVAIEKAQDSVESAKANVARN-ELQSCIEVKP-------------------- 162
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD--GEQFDFCICNPPF 251
G +L+ V+ D E+FDFC+CNPPF
Sbjct: 163 ------------------------------QKLEGSTILLDVLEDFPNERFDFCMCNPPF 192
Query: 252 FESMEEAGLNPKTSCG----------GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
++S + L P+ G G+ EE+ GGE FI +IIE+S+ LK YT
Sbjct: 193 YDSGAKE-LKPQDRTGKRREPSNASTGSLEELCTEGGEVKFIGQIIEESLLLKDRIAVYT 251
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+M+G K + + ++ L+ V V + F QG T RW +AWSF
Sbjct: 252 TMIGHKRSYEEVLRILKHASVHNVTASRFCQGNTTRWAVAWSF 294
>gi|339495189|ref|YP_004715482.1| putative SAM-dependent methyltransferase [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|386021815|ref|YP_005939840.1| putative SAM-dependent methyltransferase [Pseudomonas stutzeri DSM
4166]
gi|327481788|gb|AEA85098.1| putative SAM-dependent methyltransferase [Pseudomonas stutzeri DSM
4166]
gi|338802561|gb|AEJ06393.1| putative SAM-dependent methyltransferase [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 311
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 167/357 (46%), Gaps = 80/357 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++S DF L + P +V + G+ ID+ + +A R R LL +G+
Sbjct: 2 LHPRNRHSGRY-DFPKLIAACPELGEYVILNPYGKQSIDFANPDAVRVFNRALLRQFYGI 60
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYP 131
W IP G LCP VP R++Y+H + DLL+++ +IP G V+ DIGTGANCIYP
Sbjct: 61 QHWDIPAGYLCPPVPGRADYLHGLADLLAADNAGVIP----RGAAVRVLDIGTGANCIYP 116
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G GW F GSD+ AL A V +N + + IE+R+ D S
Sbjct: 117 LIGHREYGWRFTGSDIDATALASARTIVAAN-RLDKAIELRRQDTSTQ------------ 163
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ G++ E+F+ +CNPPF
Sbjct: 164 ---------------------------------------LFKGILAADERFELTLCNPPF 184
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL- 293
S EA PK + GG E+ C GGE AF+ R+ ++SVA
Sbjct: 185 HASQAEAASGSQRKWRNLGKLDPSRKLPKLNFGGQAAELWCEGGEAAFVARMADESVAFA 244
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
KQ +R ++++V + N+ L+++L+++G V+ + QGQ + W+F+ A +
Sbjct: 245 KQVYR-FSTLVSKGGNVAPLMARLQRLGALQVQALDMAQGQKKSRFVTWTFLDAAEQ 300
>gi|395227506|ref|ZP_10405832.1| SAM-dependent methyltransferase [Citrobacter sp. A1]
gi|424728790|ref|ZP_18157395.1| sam-dependent methyltransferase [Citrobacter sp. L17]
gi|394718834|gb|EJF24455.1| SAM-dependent methyltransferase [Citrobacter sp. A1]
gi|422896661|gb|EKU36443.1| sam-dependent methyltransferase [Citrobacter sp. L17]
Length = 308
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 157/350 (44%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N+++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHNGRY-DLATLCQVTPELTQFLTLTPGGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL +S IP + DIG GANC
Sbjct: 63 FYAVKNWDIPDGFLCPPVPGRADYIHHLADLLGETSGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + A A+ + NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSESSSEAFNSAQAIINGNPGLTRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +S+ FN G++ EQ++ +CN
Sbjct: 162 --------------------QKDASAIFN----------------GIIHKNEQYEATLCN 185
Query: 249 PPFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A + + GG +E+ C GGE AFI ++I +S A +
Sbjct: 186 PPFHDSAASARAGSERKRRNLGQDKDDALNFGGQQQELWCEGGEVAFIKKMIVESQAFGR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L G V E QGQ +AW+F+
Sbjct: 246 QVMWFTTLVSRGENLPPLYHALTDAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|451977546|ref|ZP_21927625.1| methyltransferase [Vibrio alginolyticus E0666]
gi|451929577|gb|EMD77315.1| methyltransferase [Vibrio alginolyticus E0666]
Length = 375
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 157/347 (45%), Gaps = 82/347 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L P +PFV + G I+++D NA + L + LL +G+ +W IPD LCP
Sbjct: 70 DFKKLVESEPQLKPFVIKNPKGEDSINFSDPNAVKMLNKALLAAYYGIEFWDIPDTYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LL + + KVK DIG GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYIHRVAELLDGEVKGQYTHQ--KVKALDIGVGANCIYPIVGVTKYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +++ A+ V+ N LTGK + + D +
Sbjct: 188 VDPKSIQSAQTIVEHN----------------------RVLTGKIALIQQHNDAN----- 220
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA-------- 258
+ G+++ +++D CNPPF S E+A
Sbjct: 221 ------------------------IYRGIIQPNDRYDVTTCNPPFHRSAEDAAMGSQRKI 256
Query: 259 ----------GLNPKTS----------CGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
GL P+T+ GG E+ C GGE AFI ++ +S A
Sbjct: 257 DNLKANQRKKGLKPQTAQVKTSKPALNFGGQNAELWCEGGEAAFIRKMANESQAFAAQVL 316
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++
Sbjct: 317 WFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKVSRFVAWSYM 363
>gi|91223930|ref|ZP_01259194.1| hypothetical protein V12G01_19337 [Vibrio alginolyticus 12G01]
gi|91191422|gb|EAS77687.1| hypothetical protein V12G01_19337 [Vibrio alginolyticus 12G01]
Length = 375
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 159/347 (45%), Gaps = 82/347 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L P +PFV + G I+++D +A + L + LL +G+ +W IPD LCP
Sbjct: 70 DFKKLVESEPQLKPFVIKNPKGEDSINFSDPDAVKILNKALLAAYYGIEFWDIPDTYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LL + + KVK DIG GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYIHRVAELLDGEVKGQYAHQ--KVKALDIGVGANCIYPIVGVTKYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +++ A+ V+ N +LTGK + + D +
Sbjct: 188 VDPKSIQSAQTIVEHN----------------------RALTGKIALVQQHNDAN----- 220
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA-------- 258
+ +G+++ +++D CNPPF S E+A
Sbjct: 221 ------------------------IYLGIIQPNDRYDVTTCNPPFHRSAEDAAMGSQRKI 256
Query: 259 ----------GLNPKTS----------CGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
GL P+T+ GG E+ C GGE AFI ++ +S A
Sbjct: 257 DNLKANQRKKGLKPQTTQVKTSKPALNFGGQNAELWCEGGEAAFIRKMANESQAFAAQVL 316
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++
Sbjct: 317 WFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKVSRFVAWSYM 363
>gi|161504008|ref|YP_001571120.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:- str. RSK2980]
gi|205829575|sp|A9MIS5.1|RLMF_SALAR RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|160865355|gb|ABX21978.1| hypothetical protein SARI_02101 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 308
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 157/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLTRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPQGFLCPPVPGRADYIHHLADLLGE----TTGSIPVQANILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+GA GW F GS++++ A+ A+ +++N +S I +R+ +S +
Sbjct: 119 PLIGAYEYGWRFTGSEISEAAMSSAQAIIQANTGLSRAIRLRRQKDSTA----------- 167
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ G++ E +D +CNPP
Sbjct: 168 ----------------------------------------IFTGIIHKNEYYDATLCNPP 187
Query: 251 FFESMEEA---------GLNPKT----SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A L K + GG +E+ C GGE FI ++I +S ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQKRDDVLNFGGQQQELCCEGGEVTFIKKMIAESQTFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L +VG V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|16764188|ref|NP_459803.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167550482|ref|ZP_02344239.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167992061|ref|ZP_02573159.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168263672|ref|ZP_02685645.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|194442902|ref|YP_002040062.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|197264976|ref|ZP_03165050.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198242849|ref|YP_002214789.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389530|ref|ZP_03216141.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205352082|ref|YP_002225883.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207856262|ref|YP_002242913.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|374978847|ref|ZP_09720189.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|375118275|ref|ZP_09763442.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|375122874|ref|ZP_09768038.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|378444304|ref|YP_005231936.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378449193|ref|YP_005236552.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378955814|ref|YP_005213301.1| hypothetical protein SPUL_2149 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378983421|ref|YP_005246576.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378988209|ref|YP_005251373.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|383495609|ref|YP_005396298.1| hypothetical protein UMN798_0894 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|416505194|ref|ZP_11733628.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|416523114|ref|ZP_11740861.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|416530482|ref|ZP_11745008.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|416537771|ref|ZP_11749067.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|416553663|ref|ZP_11757831.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|416560255|ref|ZP_11761084.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|418790457|ref|ZP_13346232.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19447]
gi|418791867|ref|ZP_13347618.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19449]
gi|418798921|ref|ZP_13354594.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19567]
gi|418808344|ref|ZP_13363899.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21550]
gi|418812501|ref|ZP_13368024.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22513]
gi|418815861|ref|ZP_13371356.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418820073|ref|ZP_13375508.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418833252|ref|ZP_13388182.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM N18486]
gi|418835173|ref|ZP_13390069.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM N1543]
gi|418842088|ref|ZP_13396901.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21554]
gi|418850121|ref|ZP_13404840.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 37978]
gi|418853480|ref|ZP_13408169.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19593]
gi|421357998|ref|ZP_15808305.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421364774|ref|ZP_15815005.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421367459|ref|ZP_15817652.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370356|ref|ZP_15820522.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421377801|ref|ZP_15827891.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421382369|ref|ZP_15832416.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421386105|ref|ZP_15836120.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421392130|ref|ZP_15842091.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421393030|ref|ZP_15842977.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421398938|ref|ZP_15848842.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421404847|ref|ZP_15854683.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421407982|ref|ZP_15857788.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421411207|ref|ZP_15860975.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421419083|ref|ZP_15868779.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421363|ref|ZP_15871031.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421424340|ref|ZP_15873983.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421432255|ref|ZP_15881831.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421434586|ref|ZP_15884135.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421438824|ref|ZP_15888318.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421446379|ref|ZP_15895791.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421450856|ref|ZP_15900226.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421887357|ref|ZP_16318517.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|422024966|ref|ZP_16371433.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422029991|ref|ZP_16376229.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427547198|ref|ZP_18926745.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427563245|ref|ZP_18931510.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427598118|ref|ZP_18940036.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427604261|ref|ZP_18941108.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427628943|ref|ZP_18946009.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427652241|ref|ZP_18950775.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427660206|ref|ZP_18955725.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427665334|ref|ZP_18960483.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427742698|ref|ZP_18965489.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|436736682|ref|ZP_20519471.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436801827|ref|ZP_20525143.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436811754|ref|ZP_20530634.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436816126|ref|ZP_20533677.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436839274|ref|ZP_20537594.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436851721|ref|ZP_20542320.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436858483|ref|ZP_20547003.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436865659|ref|ZP_20551626.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436875167|ref|ZP_20557074.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436879144|ref|ZP_20559535.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436884964|ref|ZP_20562362.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436896779|ref|ZP_20569535.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436904116|ref|ZP_20574217.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436911291|ref|ZP_20577120.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436918632|ref|ZP_20581778.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436930848|ref|ZP_20589073.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436933086|ref|ZP_20589525.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436942433|ref|ZP_20595379.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436947978|ref|ZP_20598384.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436963599|ref|ZP_20605876.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436969791|ref|ZP_20608706.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436977494|ref|ZP_20612272.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436995579|ref|ZP_20619304.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437005330|ref|ZP_20622422.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437022919|ref|ZP_20628784.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437032223|ref|ZP_20631867.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437041857|ref|ZP_20635762.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437050081|ref|ZP_20640362.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437055372|ref|ZP_20643515.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437068572|ref|ZP_20650703.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437077636|ref|ZP_20655535.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437086979|ref|ZP_20660988.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437088617|ref|ZP_20661654.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437108575|ref|ZP_20667542.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437124193|ref|ZP_20673264.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437134174|ref|ZP_20678598.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437138046|ref|ZP_20680776.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437147663|ref|ZP_20686945.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437156204|ref|ZP_20692129.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437161663|ref|ZP_20695599.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437166394|ref|ZP_20698047.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437179718|ref|ZP_20705569.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437184721|ref|ZP_20708572.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437189402|ref|ZP_20710630.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437260821|ref|ZP_20717891.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437267040|ref|ZP_20721006.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437276399|ref|ZP_20726408.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437300721|ref|ZP_20733145.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437311284|ref|ZP_20735879.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437320061|ref|ZP_20738228.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437336526|ref|ZP_20743133.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437420189|ref|ZP_20754566.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437447983|ref|ZP_20759151.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437467989|ref|ZP_20764631.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437473856|ref|ZP_20765963.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437489674|ref|ZP_20770459.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437512851|ref|ZP_20777406.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437537569|ref|ZP_20781827.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437556146|ref|ZP_20784983.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437579686|ref|ZP_20791736.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437596108|ref|ZP_20796158.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437607074|ref|ZP_20800092.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437621953|ref|ZP_20804463.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437640746|ref|ZP_20807821.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437659143|ref|ZP_20812070.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437678530|ref|ZP_20817732.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437690304|ref|ZP_20820222.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437712848|ref|ZP_20827224.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437735593|ref|ZP_20832489.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437782947|ref|ZP_20836602.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437804100|ref|ZP_20838769.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437919660|ref|ZP_20850688.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|438089512|ref|ZP_20860187.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438104752|ref|ZP_20866016.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438114079|ref|ZP_20869855.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438146848|ref|ZP_20876014.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445130782|ref|ZP_21381490.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445139829|ref|ZP_21384587.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445177689|ref|ZP_21397811.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445197121|ref|ZP_21400656.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445227804|ref|ZP_21404416.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445327819|ref|ZP_21412819.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445348202|ref|ZP_21419571.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445367472|ref|ZP_21425599.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|81523459|sp|Q8ZQN4.1|RLMF_SALTY RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807090|sp|B5FP91.1|RLMF_SALDC RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807091|sp|B5QXT1.1|RLMF_SALEP RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807092|sp|B5R792.1|RLMF_SALG2 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807094|sp|B4T083.1|RLMF_SALNS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|16419332|gb|AAL19762.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|194401565|gb|ACF61787.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|197243231|gb|EDY25851.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197937365|gb|ACH74698.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199601975|gb|EDZ00521.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205271863|emb|CAR36699.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205324577|gb|EDZ12416.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205329571|gb|EDZ16335.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205347741|gb|EDZ34372.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206708065|emb|CAR32356.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246083|emb|CBG23885.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992571|gb|ACY87456.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|312911849|dbj|BAJ35823.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|321226399|gb|EFX51450.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|326622542|gb|EGE28887.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326627124|gb|EGE33467.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|332987756|gb|AEF06739.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|357206425|gb|AET54471.1| hypothetical protein SPUL_2149 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|363550761|gb|EHL35087.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|363550934|gb|EHL35259.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|363556128|gb|EHL40343.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|363562582|gb|EHL46678.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|363562890|gb|EHL46978.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|363574930|gb|EHL58789.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|379983073|emb|CCF90790.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|380462430|gb|AFD57833.1| hypothetical protein UMN798_0894 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|392758020|gb|EJA14897.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19447]
gi|392765563|gb|EJA22349.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19567]
gi|392769400|gb|EJA26133.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19449]
gi|392775921|gb|EJA32611.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22513]
gi|392776532|gb|EJA33219.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21550]
gi|392791228|gb|EJA47718.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392793089|gb|EJA49534.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392795824|gb|EJA52175.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM N18486]
gi|392803991|gb|EJA60168.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM N1543]
gi|392807413|gb|EJA63484.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21554]
gi|392819327|gb|EJA75199.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 37978]
gi|392826741|gb|EJA82462.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19593]
gi|395983002|gb|EJH92196.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395985979|gb|EJH95143.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395989093|gb|EJH98228.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395998078|gb|EJI07116.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395998276|gb|EJI07308.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396006908|gb|EJI15869.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396009810|gb|EJI18733.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396014724|gb|EJI23609.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396019281|gb|EJI28138.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396024694|gb|EJI33479.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396029112|gb|EJI37851.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396029382|gb|EJI38119.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396036591|gb|EJI45250.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396040678|gb|EJI49301.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396046741|gb|EJI55324.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396050646|gb|EJI59168.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396060337|gb|EJI68783.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396060394|gb|EJI68839.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396061961|gb|EJI70374.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396065352|gb|EJI73729.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396072052|gb|EJI80367.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|414022555|gb|EKT06032.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414022679|gb|EKT06151.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414024134|gb|EKT07529.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414026430|gb|EKT09700.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414036376|gb|EKT19210.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414041032|gb|EKT23621.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414050953|gb|EKT33101.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414052215|gb|EKT34278.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414056460|gb|EKT38285.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414061194|gb|EKT42630.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414066752|gb|EKT47251.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|434938581|gb|ELL45531.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434957783|gb|ELL51390.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434964385|gb|ELL57407.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434974242|gb|ELL66630.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434977832|gb|ELL69915.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|434980582|gb|ELL72503.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434987023|gb|ELL78674.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434990635|gb|ELL82185.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434994758|gb|ELL86075.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|434996694|gb|ELL88010.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435007127|gb|ELL97984.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435013146|gb|ELM03806.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435016668|gb|ELM07194.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435017488|gb|ELM07990.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435025536|gb|ELM15667.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435030630|gb|ELM20639.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435032503|gb|ELM22447.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435042632|gb|ELM32349.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435044141|gb|ELM33839.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435048848|gb|ELM38404.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435056716|gb|ELM46087.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435058561|gb|ELM47882.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435063021|gb|ELM52193.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435070707|gb|ELM59689.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435071670|gb|ELM60610.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435076177|gb|ELM64973.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435080159|gb|ELM68852.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435085121|gb|ELM73675.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435095063|gb|ELM83400.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435095222|gb|ELM83540.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435098714|gb|ELM86945.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435103125|gb|ELM91228.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435103340|gb|ELM91435.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435116652|gb|ELN04387.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435119364|gb|ELN06980.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435119653|gb|ELN07255.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435120547|gb|ELN08125.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435133766|gb|ELN20922.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435133983|gb|ELN21127.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435136983|gb|ELN24055.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435144720|gb|ELN31552.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435150325|gb|ELN37003.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435153052|gb|ELN39673.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435160638|gb|ELN46901.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435163277|gb|ELN49413.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435173757|gb|ELN59226.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435176192|gb|ELN61582.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435178584|gb|ELN63791.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435184046|gb|ELN68992.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435197399|gb|ELN81684.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435197595|gb|ELN81878.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435201391|gb|ELN85303.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435209250|gb|ELN92578.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435215438|gb|ELN98125.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435224779|gb|ELO06728.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435230543|gb|ELO11849.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435231676|gb|ELO12905.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435233354|gb|ELO14393.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435239945|gb|ELO20378.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435241266|gb|ELO21631.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435241687|gb|ELO22029.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435250438|gb|ELO30168.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435254280|gb|ELO33683.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435256173|gb|ELO35518.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435270195|gb|ELO48699.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435273225|gb|ELO51567.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435276695|gb|ELO54693.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435281675|gb|ELO59335.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435285989|gb|ELO63331.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435287131|gb|ELO64346.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435299315|gb|ELO75467.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435303029|gb|ELO78950.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435313814|gb|ELO87356.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|435316937|gb|ELO90013.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435322048|gb|ELO94389.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435329103|gb|ELP00556.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|444851540|gb|ELX76629.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444853127|gb|ELX78199.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444855944|gb|ELX80983.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444864045|gb|ELX88855.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444866714|gb|ELX91434.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444876337|gb|ELY00513.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444880597|gb|ELY04671.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444882419|gb|ELY06385.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 308
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|153807841|ref|ZP_01960509.1| hypothetical protein BACCAC_02125 [Bacteroides caccae ATCC 43185]
gi|423217674|ref|ZP_17204170.1| ribosomal RNA large subunit methyltransferase F [Bacteroides caccae
CL03T12C61]
gi|149129450|gb|EDM20664.1| hypothetical protein BACCAC_02125 [Bacteroides caccae ATCC 43185]
gi|392628833|gb|EIY22859.1| ribosomal RNA large subunit methyltransferase F [Bacteroides caccae
CL03T12C61]
Length = 305
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 159/355 (44%), Gaps = 74/355 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +NK++ DF+LL YP + FV + G I++ + A + L + LL+
Sbjct: 3 ERSELHTRNKHN-GQYDFSLLTENYPPLKKFVQLNPYGTQTINFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR--NGDKVKG----FDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ S + + NG+ K DIG
Sbjct: 62 YYGIRYWDIPKNYLCPPIPGRADYIHYIADLIGSEAVSKDVKVENGEIRKSAYRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G GW FVGSD+ +++E A K V NP ++ IE+R +S
Sbjct: 122 GANCIYPIIGHVEYGWMFVGSDIDPISIENARKIVTCNPVLAHKIELRLQKDSRK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFEGIIAPDEYFDV 190
Query: 245 CICNPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIED 289
ICNPPF S EEA K + GG E+ C GGE F+ +I +
Sbjct: 191 TICNPPFHRSKEEAEEGTLRKLSSLKGEIVKKAKLNFGGNANELWCEGGELRFLLNMIVE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S ++ W+TS+V ++ NL L +KL+ V V+ K QG L W F
Sbjct: 251 SRKYRKNCGWFTSLVSKEKNLDKLYAKLKAVEVSEYKVIRMHQGTKSSRILVWKF 305
>gi|120436996|ref|YP_862682.1| SAM-dependent methyltransferase [Gramella forsetii KT0803]
gi|205829561|sp|A0M4S0.1|RLMF_GRAFK RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|117579146|emb|CAL67615.1| protein containing DUF890 [Gramella forsetii KT0803]
Length = 285
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 159/343 (46%), Gaps = 73/343 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL-LHDHG 74
+HP N + ++ DF L P FVF ++ G I++ + A +L + LL H
Sbjct: 1 MHPDNIHKDSY-DFEALTESNPQLSEFVFQNKYGTQTINFANPEAVLQLNKALLKFHYQV 59
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
NW IP LCP +P R++YIH++ DLLS I +++G DIG GAN IYP+L
Sbjct: 60 ENWSIPKQYLCPPIPGRADYIHYLNDLLSEENIQ------GEIRGIDIGVGANAIYPILA 113
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ + W +G+D+ + ++ A+ N+++NP I++ IEIR ++ S
Sbjct: 114 SRIYDWKMLGTDIEEKSVAIAQANIETNPTIAKNIEIRHQEDRGS--------------- 158
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G+++ GE + F ICNPPF S
Sbjct: 159 ------------------------------------IFKGMIKKGEYYHFSICNPPFHAS 182
Query: 255 MEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
EEA GL ++ GG E+ C+GGE FI R+I++SV K ++T
Sbjct: 183 QEEANKATSRKFKNLGLEKGSALNFGGQANELWCNGGEALFIKRMIKESVLFKSQVGYFT 242
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S+V +K NL + L K+ KT E QG +AW F
Sbjct: 243 SLVSKKENLPKIYKHLNKLKADF-KTIEMGQGNKKSRIIAWKF 284
>gi|197248015|ref|YP_002145782.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|440764341|ref|ZP_20943369.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440769511|ref|ZP_20948469.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440770985|ref|ZP_20949913.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|254807089|sp|B5F0A4.1|RLMF_SALA4 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|197211718|gb|ACH49115.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|436414599|gb|ELP12527.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436416491|gb|ELP14396.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436423557|gb|ELP21368.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
Length = 308
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALAEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|393787121|ref|ZP_10375253.1| ribosomal RNA large subunit methyltransferase F [Bacteroides nordii
CL02T12C05]
gi|392658356|gb|EIY51986.1| ribosomal RNA large subunit methyltransferase F [Bacteroides nordii
CL02T12C05]
Length = 330
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 161/349 (46%), Gaps = 71/349 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
ER +H +N+++ DF+ L YP + FV + G I++ + A + L + LL+
Sbjct: 37 ERNELHKRNRHN-GQYDFSKLTENYPPLKKFVSPNPYGTLSINFFNPQAVKALNKALLIS 95
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP G LCP +P R++YIH+I DLL+S + K + DIG GANCIY
Sbjct: 96 YYGIRYWDIPKGYLCPPIPGRADYIHYIADLLNSG---NSLEETPKYRCLDIGVGANCIY 152
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P++G + GW+FVGSD+ V++E A K V NP + IE+R ++ S
Sbjct: 153 PIIGCTEYGWTFVGSDIDPVSIENARKIVTCNPVLVHKIELRLQKDNRS----------- 201
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ G+++ E FD ICNPP
Sbjct: 202 ----------------------------------------IFKGIIQPDEYFDVTICNPP 221
Query: 251 FFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
F S EEA G K S GG E+ C GGE F+ +I +S ++
Sbjct: 222 FHSSKEEAEEGTLRKLSSLKGKKVSKAQLNFGGNANELWCEGGELRFLLDMITESRKYQK 281
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V ++ NL L ++L+ V KT QG LAW F
Sbjct: 282 NCGWFTSLVSKEKNLNKLYTRLKLEDVAEYKTIRMQQGTKSSRILAWRF 330
>gi|315051272|ref|XP_003175010.1| DUF890 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311340325|gb|EFQ99527.1| DUF890 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 432
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 181/352 (51%), Gaps = 81/352 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DFA LA P+F+ F+ + ++D+++ +A R+LT LL D GL+ +PD +LCP
Sbjct: 13 DFAALALQDPAFKEFL----SAKGQLDFSNPDAVRQLTVSLLRRDFGLDVELPDDRLCPP 68
Query: 88 VPNRS-NYIHWIEDLLSSNIIPTTSRNGDK------VKGFDIGTGANCIYPLLG-ASLLG 139
V + S NYI W++DL++ T G+K V G DIGTG++CIYPLLG
Sbjct: 69 VNDCSLNYILWLQDLIAC----TGDDYGEKLDAERDVVGLDIGTGSSCIYPLLGTVHRKR 124
Query: 140 WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMD 199
W+FV +D+ + L+ A +NV+ N H+ I++ +STP
Sbjct: 125 WTFVATDIDEKNLQHARENVRRN-HLQSRIQV-----VDSTPD----------------- 161
Query: 200 MSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES----- 254
GP + + ++ + DF +CNPPF+ES
Sbjct: 162 ----------------------------GPLIPLDRIQR-KMLDFTMCNPPFYESHEEML 192
Query: 255 --MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKF 312
EE P + C G EM+ GGE AF+ ++I++S+ L++ RWYTSM+G++S+L
Sbjct: 193 QLAEEKEHEPLSVCTGAEMEMITPGGEVAFVKKMIQESLRLQEAVRWYTSMLGKRSSLLS 252
Query: 313 LISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVAEKKNLS 363
LI +L+++ TEF+QG +T RW +AWS+ K I P + +++S
Sbjct: 253 LIDELQRLDNKNWAVTEFIQGDKTKRWAIAWSW-----KDIRPTMGVARSIS 299
>gi|270490208|ref|ZP_06207282.1| putative ribosomal RNA large subunit methyltransferase F [Yersinia
pestis KIM D27]
gi|270338712|gb|EFA49489.1| putative ribosomal RNA large subunit methyltransferase F [Yersinia
pestis KIM D27]
Length = 308
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 166/364 (45%), Gaps = 78/364 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L+ P PF+ + G +D+ D A + L + LL H +G+
Sbjct: 1 MHPRNRHCSRY-DFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKMLNKALLKHFYGI 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIYP 131
+W IP LCP +P R++Y+H + DLL+S +IP G + DIG GANCIYP
Sbjct: 60 EYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIP----KGKNIALLDIGVGANCIYP 115
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 116 IIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLK------------------- 156
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
++ +P + + GV E++D +CNPPF
Sbjct: 157 --------------QQKDPHA------------------IFEGVWAVNERYDATLCNPPF 184
Query: 252 FESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
S EEA P + GG E+ C GGE F++R++ +SVA Q
Sbjct: 185 HGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAESVAKAQ 244
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPH 355
W+TS++ +K+ L + LR V V+T E QGQ +AW+F+ P ++ +
Sbjct: 245 NCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSRFVAWTFLTPEQQ--AAW 302
Query: 356 VAEK 359
VAE+
Sbjct: 303 VAER 306
>gi|387892258|ref|YP_006322555.1| hypothetical protein PflA506_1034 [Pseudomonas fluorescens A506]
gi|387161820|gb|AFJ57019.1| hypothetical protein PflA506_1034 [Pseudomonas fluorescens A506]
Length = 338
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 163/351 (46%), Gaps = 78/351 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N+++ DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRHTGRY-DFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKSFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIY 130
+ W IP LCP VP R++Y+H++ DLL+S IP G VK DIG GANC+Y
Sbjct: 89 IQHWDIPADYLCPPVPGRADYVHFLADLLASVNDGKIP----RGSIVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G W+F+GS++ A+ A+ V+SN +S++I++R+ N +
Sbjct: 145 PLIGYMEYRWNFLGSEVDPTAVAAAKAIVQSN-DLSKVIQLRQQPNPKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 AHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|206575991|ref|YP_002239552.1| SAM-dependent methyltransferase [Klebsiella pneumoniae 342]
gi|254807087|sp|B5XYT7.1|RLMF_KLEP3 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|206565049|gb|ACI06825.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
Length = 304
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 166/355 (46%), Gaps = 70/355 (19%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
H + + W IPDG LCP VP R++YIH + DLL+ + + + DIGTGAN
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAQD----SGEVPKQATILDIGTGANL 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
I+PL+G GW F GS+++ A A+ V NP ++ I +R+
Sbjct: 117 IFPLIGVHEYGWRFTGSEISPEAFASAQAIVNGNPGLTRQIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
Q ES Q+ +H GV+ E +D +CN
Sbjct: 162 ----QKES--------------------------QAIFH------GVIHKNETYDATLCN 185
Query: 249 PPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S E A G + + GG +E+ C GGE AFI+++I +S A +
Sbjct: 186 PPFHDSAESARAGGERKRRNLGLGADSALNFGGQQQELWCEGGEVAFISQMIRESQAFAR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+W+TS+V R NL L L KVG V E QGQ +AWSF+ A++
Sbjct: 246 QVKWFTSLVSRGDNLPPLYRLLTKVGAVKVVKKEMAQGQKQSRFIAWSFMDDAKR 300
>gi|398882827|ref|ZP_10637792.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM60]
gi|398198124|gb|EJM85088.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM60]
Length = 341
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+Y
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPR-GAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAVAAAKAIVQSN-GLNKAIQLRQQANPKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|160887525|ref|ZP_02068528.1| hypothetical protein BACOVA_05545 [Bacteroides ovatus ATCC 8483]
gi|156107936|gb|EDO09681.1| hypothetical protein BACOVA_05545 [Bacteroides ovatus ATCC 8483]
Length = 309
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 165/356 (46%), Gaps = 74/356 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +H +NK++ DF LL YP + FV + G I++ + A + L + LL+
Sbjct: 3 KKGELHIRNKHN-GQYDFPLLMENYPPLKRFVSLNPLGIQTINFFNPQAVKALNKALLVT 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN----IIPTTSRNGDKVKG--FDIGT 124
+G+ +W IP LCP +P R++YIH+I DL+ N +P NG K K DIG
Sbjct: 62 YYGIRYWDIPKQYLCPPIPGRADYIHYIADLIQPNGTTPDLPAGDANGQKSKCRCLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G + GW+FVG+D+ V++E A K V NP ++ I++R +S+
Sbjct: 122 GANCIYPIIGHTEYGWTFVGTDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSKK----- 176
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ G++ E FD
Sbjct: 177 ----------------------------------------------IFDGIIMSDEYFDV 190
Query: 245 CICNPPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRIIED 289
ICNPPF S EEA G K S GG+ E+ C GGE F+ +I +
Sbjct: 191 TICNPPFHSSREEAEDGTLRKLSSLKGTKINKVQLNFGGSANELWCEGGEVRFLLNMISE 250
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
S ++ W+TS+V ++ NL+ L +KL+ V V+ K QG LAW F
Sbjct: 251 SQKYQKNCGWFTSLVSKEKNLEKLYTKLKSVNVSEYKVIRMQQGTKSSRILAWRFA 306
>gi|262407366|ref|ZP_06083914.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
2_1_22]
gi|294645977|ref|ZP_06723643.1| putative ribosomal RNA large subunit methyltransferase F
[Bacteroides ovatus SD CC 2a]
gi|294809362|ref|ZP_06768072.1| putative ribosomal RNA large subunit methyltransferase F
[Bacteroides xylanisolvens SD CC 1b]
gi|345509805|ref|ZP_08789393.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
D1]
gi|229446879|gb|EEO52670.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
D1]
gi|262354174|gb|EEZ03266.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
2_1_22]
gi|292638660|gb|EFF57012.1| putative ribosomal RNA large subunit methyltransferase F
[Bacteroides ovatus SD CC 2a]
gi|294443454|gb|EFG12211.1| putative ribosomal RNA large subunit methyltransferase F
[Bacteroides xylanisolvens SD CC 1b]
Length = 311
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 166/357 (46%), Gaps = 76/357 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +H +NK++ DF LL YP + FV + G I++ + A + L + LL+
Sbjct: 3 QKGELHIRNKHN-GQYDFLLLIENYPPLKRFVSLNPLGVQTINFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS----SNIIPTTSRNGD----KVKGFDI 122
+G+ +W IP LCP +P R++YIH+I DL+ +N + T + + K + D+
Sbjct: 62 YYGIRYWDIPKQYLCPPIPGRADYIHYIADLIQPDRVANDLQTEEEDANEQKTKCRCLDV 121
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G + GW+FVGSD+ V++E A K V NP ++ I++R +S
Sbjct: 122 GVGANCIYPIIGHTEYGWTFVGSDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSRK--- 178
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ G++ GE F
Sbjct: 179 ------------------------------------------------IFDGIIMPGEYF 190
Query: 243 DFCICNPPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRII 287
D ICNPPF S EEA G K S GG+ E+ C GGE FI +I
Sbjct: 191 DVTICNPPFHSSKEEAEDGTLRKLSSLKGTKVKKVQLNFGGSANELWCEGGEIRFILNMI 250
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S ++ W+TS+V ++ NL+ L +KL+ V V+ K QG LAW F
Sbjct: 251 SESQKYQKNCGWFTSLVSKEKNLEKLCAKLKSVNVSEYKIIRMQQGTKSSRILAWRF 307
>gi|321469933|gb|EFX80911.1| hypothetical protein DAPPUDRAFT_50570 [Daphnia pulex]
Length = 449
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 156/339 (46%), Gaps = 68/339 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y PPDF LA +P F G+ ID+ D A R L+ VLL D L
Sbjct: 1 MHPRNPY-RTPPDFKELALKFPEFRKHAKQKLTGKIEIDFKDAAAVRALSTVLLKRDFNL 59
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ +P +L PT+P R NY+ W+EDLL + P + + V G DIGTGA CIYP+L A
Sbjct: 60 DVELPPDRLVPTLPLRLNYLLWVEDLLQL-VNPASEQ---IVHGIDIGTGACCIYPILAA 115
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ GW F ++ + + + + ++ N S+Q +T V E
Sbjct: 116 RMKGWHFTATEADETNYKCSLETLEHN-------------------SLQSHITIVKVTAE 156
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES- 254
S +L G + ++DF +CNPPFF+S
Sbjct: 157 S----------------------------------MLHGNIDTNRKYDFTMCNPPFFDSD 182
Query: 255 ---------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
+ PK+ + E+ GGE FI +I++ K R +T+M+G
Sbjct: 183 SFGPKSRSDKRPLPMCPKSGGSASTTEIAVKGGEVKFIENLIKECQEFKSCVRMFTTMLG 242
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
KS+L +I L++ G + TEF QG+T RWGLAW+F
Sbjct: 243 HKSSLAPIILLLKEAGASSWSETEFCQGRTTRWGLAWTF 281
>gi|375000585|ref|ZP_09724925.1| hypothetical protein SEENIN0B_00881 [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353075273|gb|EHB41033.1| hypothetical protein SEENIN0B_00881 [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 308
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|170729142|ref|YP_001763168.1| putative SAM-dependent methyltransferase [Shewanella woodyi ATCC
51908]
gi|205829614|sp|B1KP42.1|RLMF_SHEWM RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|169814489|gb|ACA89073.1| protein of unknown function DUF890 [Shewanella woodyi ATCC 51908]
Length = 382
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 170/391 (43%), Gaps = 99/391 (25%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
R ++P +HP+N + + DF L + P P+V + G ID+ D A + L
Sbjct: 36 RAINNQKPGLHPRNLHRDGY-DFDKLTKVSPVLTPYVQPNPYGNLSIDFADPQAVKALNA 94
Query: 67 VLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---------------SNIIPTT 110
+L D+ + NW IP+G LCP +P R +Y+H+I DLL+ N+ P
Sbjct: 95 AILKLDYQIDNWDIPEGFLCPPIPGRVDYLHYIYDLLAGVEEFENKSETEMEGQNVPPVN 154
Query: 111 SRNGD----KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS 166
S K+K DIGTGAN IYPLLG GW FV SD+ ++L + V+ N +
Sbjct: 155 SHTIKPKKMKIKALDIGTGANAIYPLLGIQTYGWRFVASDVDPISLANVKAIVEGNNCLL 214
Query: 167 ELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSY 226
+E+R ++ +
Sbjct: 215 GKLEVRLQNDHQK----------------------------------------------- 227
Query: 227 HGPPVLVGVVRDGEQFDFCICNPPFFESMEEAG--------------------LNPKT-- 264
V G+++ ++FD +CNPPF S++EA L PK
Sbjct: 228 ----VFSGIIKPDDRFDITLCNPPFHASLKEASEGSQRKLKNLAENRASKGHKLEPKAPK 283
Query: 265 -----SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319
+ GG E+ C GGE+ F+ +I +S W+TS+V +K NL+ ++L++
Sbjct: 284 DKSQLNFGGQKAELWCEGGEKQFLHNMICESKVFATQCLWFTSLVSKKENLEACYTELKR 343
Query: 320 VGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
VG VKT + QG LAWSF+ P+++
Sbjct: 344 VGAITVKTIDMAQGNKLTRVLAWSFLTPSQR 374
>gi|383189318|ref|YP_005199446.1| putative SAM-dependent methyltransferase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371587576|gb|AEX51306.1| putative SAM-dependent methyltransferase [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 322
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 164/362 (45%), Gaps = 80/362 (22%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L + P PFV ++ G +D+ + A + L R LL
Sbjct: 9 QEKSGLHPRNRHRSRY-DFPALIASSPELAPFVVENKWGDLSVDFANAQAVKALNRALLR 67
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG-----FDIGT 124
+ + NW IP LCP +P R++YIH + DLL+ S NG+ +G DIG
Sbjct: 68 DCYQIENWDIPADYLCPPIPGRADYIHHLADLLAG------SNNGNIPQGKDISVLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G GW F S++ V++ A+K V +NP ++ + R
Sbjct: 122 GANCIYPIIGLREYGWRFTASEIDPVSMAAAKKIVATNPQLTNQVRFRL----------- 170
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+A+P +L ++R E++D
Sbjct: 171 ----------------------QAKPQR------------------ILDTIIRHDERYDA 190
Query: 245 CICNPPFF-----------ESMEEAGLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF + GL+ + GG E+ C GGE AF+ R+ E
Sbjct: 191 VLCNPPFHASAADAASGSQRKRQNLGLDRRAGTAELNFGGQHNELWCEGGEEAFVVRMAE 250
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
+S Q WYT +V +K+ L L LR+ G T V+T E V G +AW+F+ P+
Sbjct: 251 ESAGKAQNCFWYTVLVSKKTTLPLLYDALREEGATDVRTVEMVHGNKISRFVAWTFLTPS 310
Query: 349 RK 350
++
Sbjct: 311 QQ 312
>gi|386080072|ref|YP_005993597.1| SAM-dependent methyltransferase YbiN [Pantoea ananatis PA13]
gi|354989253|gb|AER33377.1| SAM-dependent methyltransferase YbiN [Pantoea ananatis PA13]
Length = 307
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 163/359 (45%), Gaps = 76/359 (21%)
Query: 9 RREERPTI-HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
++ P++ H +N++ + DFA L + +P V + G +D+ D A L +
Sbjct: 2 KKSASPSLFHARNRH-QGEYDFAALTAAHPPLAAKVRPNGYGVMSVDFADPEAVMLLNQA 60
Query: 68 LLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGT 124
LL +GL+W + G LCP VP R++Y+H++ DLL+ +P+ DIG
Sbjct: 61 LLKLFYGLDWQLAPGSLCPPVPGRADYLHYLADLLALDNQGRVPSADV-------LDIGC 113
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYPL+GA+ GW F G+++ D AL+ A K V +N ++ LI +R+ N ++
Sbjct: 114 GANCIYPLIGAAEYGWRFTGTEIDDAALKAAGKIVAANAGMARLIRLRRQKNPQA----- 168
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
VL GVV G F
Sbjct: 169 ----------------------------------------------VLNGVVNKGAFFHA 182
Query: 245 CICNPPFFESM-----------EEAGLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSV 291
ICNPPF S GL + GG E+ C GGE+AF+ ++I +S
Sbjct: 183 VICNPPFHASAAEAAAGSQRKSRNLGLQQSAPLNFGGQHNELWCEGGEKAFVGKMIAESA 242
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W+TS+V RK +L L +L+ + +V+ QGQ LAWSF+ A++
Sbjct: 243 GLASQVVWFTSLVSRKEHLPALEKQLQALDTAVVRVVNMAQGQKQSRFLAWSFMSAAQR 301
>gi|423139274|ref|ZP_17126912.1| hypothetical protein SEHO0A_00769 [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379051828|gb|EHY69719.1| hypothetical protein SEHO0A_00769 [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 308
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 157/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLTRTPTGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPQGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIILKNESYDAALCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQTFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTDAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|168820024|ref|ZP_02832024.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|409249271|ref|YP_006885103.1| Ribosomal RNA large subunit methyltransferase F 23S rRNA mA1618
methyltransferase; rRNA adenine N-6-methyltransferase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|205343220|gb|EDZ29984.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320085099|emb|CBY94886.1| Ribosomal RNA large subunit methyltransferase F 23S rRNA mA1618
methyltransferase; rRNA adenine N-6-methyltransferase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
Length = 308
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQTFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|168466426|ref|ZP_02700288.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418763601|ref|ZP_13319716.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|418765212|ref|ZP_13321302.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|418769487|ref|ZP_13325517.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|418773427|ref|ZP_13329411.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|418780100|ref|ZP_13335991.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|418783038|ref|ZP_13338889.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|418803655|ref|ZP_13359273.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|419790887|ref|ZP_14316553.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|195631068|gb|EDX49654.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392612630|gb|EIW95099.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392733069|gb|EIZ90275.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|392739783|gb|EIZ96915.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|392741365|gb|EIZ98470.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|392750333|gb|EJA07302.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|392753801|gb|EJA10722.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|392758108|gb|EJA14984.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|392772750|gb|EJA29450.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
Length = 308
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKTLLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|398994607|ref|ZP_10697506.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM21]
gi|398131928|gb|EJM21224.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM21]
Length = 340
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 164/348 (47%), Gaps = 72/348 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N++ + DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 SLHPRNRH-QGRYDFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKSFYG 88
Query: 75 L-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ +W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+YPL+
Sbjct: 89 IAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPR-GAPVKVLDIGMGANCVYPLI 147
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 148 GYSDYRWHFLGSEIDPTAVAAAKAIVQSN-GLNKAIQLRQQSNPKH-------------- 192
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+L+G++ GE+FD +CNPPF
Sbjct: 193 -------------------------------------ILLGLLEPGERFDLTMCNPPFHA 215
Query: 254 SMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
SM+EA P + GG E+ C GGE F+T++I +S + +
Sbjct: 216 SMDEATKGSERKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESASFQHK 275
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 276 VLWFSTLVSKASNLPAIQTALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|398879618|ref|ZP_10634709.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM67]
gi|398195991|gb|EJM83009.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM67]
Length = 341
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+Y
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPR-GAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAVAAAKAIVQSN-GLNKAIQLRQQTNPKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|56414074|ref|YP_151149.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197362997|ref|YP_002142634.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|238913893|ref|ZP_04657730.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|81360219|sp|Q5PG24.1|RLMF_SALPA RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807095|sp|B5BC01.1|RLMF_SALPK RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|56128331|gb|AAV77837.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094474|emb|CAR59991.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 308
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQTFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|421496692|ref|ZP_15943909.1| 23S rRNA methyltransferase [Aeromonas media WS]
gi|407184312|gb|EKE58152.1| 23S rRNA methyltransferase [Aeromonas media WS]
Length = 313
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 156/360 (43%), Gaps = 75/360 (20%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
+ + + +HP+N++ + DF L P PFVF + G +D+ D A + L R L
Sbjct: 2 KTQHKSGLHPRNRH-QTTYDFDALCQRTPELLPFVFVNEHGTRTLDFADPAAVKALNRAL 60
Query: 69 LLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTG 125
L +G+ W +P G LCP +P R +Y+H + DLL S+ +P G V+ DIG G
Sbjct: 61 LALHYGIQHWDLPPGYLCPPIPGRVDYLHRVADLLAESAGEVP----RGKGVRVLDIGVG 116
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLGA GW FVGSD+ V+++ A SN + I R DN +
Sbjct: 117 ANCIYPLLGAREYGWRFVGSDIDPVSVKAATLLAASN-GLGSQIACRHQDNPKQ------ 169
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+ GV+ E+F
Sbjct: 170 ---------------------------------------------IFCGVLGPKERFALT 184
Query: 246 ICNPPFFESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
+CNPPF S+ EA P + GG E+ C GGE AF+ +IE S
Sbjct: 185 LCNPPFHASLAEASKGTERKLRNLGKALTGTPVLNFGGQKAELWCEGGEAAFLAGMIEQS 244
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
A W++S+V +K NL L +VG V+ + QG LAWSF+ A +
Sbjct: 245 KAFAGQCLWFSSLVSKKENLPAARKALARVGAQDVRVIDMAQGNKVSRILAWSFLDEASR 304
>gi|345298454|ref|YP_004827812.1| ribosomal RNA large subunit methyltransferase F [Enterobacter
asburiae LF7a]
gi|345092391|gb|AEN64027.1| Ribosomal RNA large subunit methyltransferase F [Enterobacter
asburiae LF7a]
Length = 303
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 160/355 (45%), Gaps = 83/355 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D L P + F+ + G P +++ D A + L + LL H
Sbjct: 4 QKPGLHPRNRHRSRY-DMQALCLSCPPLQDFIVQTPAGEPSVNFADPQAVKMLNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP+G LCP VP R++YIH + DLL+ + +IP + DIGTGAN
Sbjct: 63 YYGVAHWDIPEGFLCPPVPGRADYIHHLADLLAEDNAGVIPK------QATILDIGTGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPL+GA GW F G+++ A A+ + +N +S I +R+
Sbjct: 117 LIYPLIGAHEYGWRFTGTEIDASAFASAQAIINANAGLSRAIRLRR-------------- 162
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ ++ FN G++ EQ+D +C
Sbjct: 163 ---------------------QKDAADIFN----------------GIIHKNEQYDATLC 185
Query: 248 NPPFFES-----------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF +S E+ LN GG +E+ C GGE AFI ++I S
Sbjct: 186 NPPFHDSAASARAGSERKRRNLGQAEDGALN----FGGQQQELWCEGGEVAFIPKMIAQS 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
A + +W+T++V R NL L L + G V E QGQ +AWSF+
Sbjct: 242 KAFGRQVKWFTTLVSRGDNLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWSFM 296
>gi|51245141|ref|YP_065025.1| SAM-dependent methyltransferase [Desulfotalea psychrophila LSv54]
gi|81642445|sp|Q6ANQ6.1|RLMF_DESPS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|50876178|emb|CAG36018.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 309
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 73/347 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + D L P + + G ID++D A L R LL H + +
Sbjct: 15 LHPRNPH-RGRYDLDALCRTCPELKMHIQIKPTGDKTIDFSDAKAVLCLNRALLAHYYQV 73
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
NW IP+G LCP +P R++YIH++ DLL+ ++ PT+++ G K++ DIGTGANCIYP++G
Sbjct: 74 SNWQIPEGYLCPPIPGRADYIHYLADLLAEDL-PTSAK-GKKIRVLDIGTGANCIYPIIG 131
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW FVG+D+ +A++ A V++N ++ I +++ + + L K + +
Sbjct: 132 SQSYGWHFVGTDIDPLAIKIAGMIVQANSCLNGKITLKQ--------QLDKKLIFKGIIN 183
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
E ++FD +CNPPF S
Sbjct: 184 E--------------------------------------------DKFDLTMCNPPFHAS 199
Query: 255 MEEA-----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
+ EA K + GG E+ C GGE F+ ++ E+SVA +
Sbjct: 200 LAEAEAGNQRKRKNLGHGKENRAQEKLNFGGQNAELWCPGGEIVFLRQMAEESVAFAKQV 259
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
RW++S++ + N+ L L+++G +K E QGQ +AWSF
Sbjct: 260 RWFSSLLSKGKNVAPLKKLLKQLGCKRIKVVEMAQGQKISRFIAWSF 306
>gi|168230727|ref|ZP_02655785.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194469831|ref|ZP_03075815.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456195|gb|EDX45034.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205334735|gb|EDZ21499.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 308
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 159/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLICTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|161614923|ref|YP_001588888.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|168240693|ref|ZP_02665625.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194447609|ref|YP_002044854.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|386590733|ref|YP_006087133.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|419727973|ref|ZP_14254941.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419736764|ref|ZP_14263590.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419738612|ref|ZP_14265372.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419742533|ref|ZP_14269206.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419747645|ref|ZP_14274149.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421569205|ref|ZP_16014909.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421573442|ref|ZP_16019078.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421580101|ref|ZP_16025662.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421584759|ref|ZP_16030266.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|205829606|sp|A9MSU1.1|RLMF_SALPB RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807093|sp|B4TC80.1|RLMF_SALHS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|161364287|gb|ABX68055.1| hypothetical protein SPAB_02677 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405913|gb|ACF66132.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205340176|gb|EDZ26940.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|381290438|gb|EIC31703.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381301555|gb|EIC42611.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381302012|gb|EIC43061.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381313828|gb|EIC54607.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381316612|gb|EIC57358.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383797777|gb|AFH44859.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|402520580|gb|EJW27922.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402527559|gb|EJW34820.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402527701|gb|EJW34961.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402530731|gb|EJW37945.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
Length = 308
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQTFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|237722482|ref|ZP_04552963.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293371022|ref|ZP_06617564.1| putative ribosomal RNA large subunit methyltransferase F
[Bacteroides ovatus SD CMC 3f]
gi|336415896|ref|ZP_08596234.1| ribosomal RNA large subunit methyltransferase F [Bacteroides ovatus
3_8_47FAA]
gi|423287930|ref|ZP_17266781.1| ribosomal RNA large subunit methyltransferase F [Bacteroides ovatus
CL02T12C04]
gi|423295546|ref|ZP_17273673.1| ribosomal RNA large subunit methyltransferase F [Bacteroides ovatus
CL03T12C18]
gi|229448292|gb|EEO54083.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292633952|gb|EFF52499.1| putative ribosomal RNA large subunit methyltransferase F
[Bacteroides ovatus SD CMC 3f]
gi|335939799|gb|EGN01671.1| ribosomal RNA large subunit methyltransferase F [Bacteroides ovatus
3_8_47FAA]
gi|392671945|gb|EIY65416.1| ribosomal RNA large subunit methyltransferase F [Bacteroides ovatus
CL02T12C04]
gi|392672255|gb|EIY65724.1| ribosomal RNA large subunit methyltransferase F [Bacteroides ovatus
CL03T12C18]
Length = 309
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 163/352 (46%), Gaps = 74/352 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +NK++ DF LL YP + FV + G I++ + A + L + LL+ +G+
Sbjct: 7 LHIRNKHN-GQYDFPLLMENYPPLKRFVSLNPLGIQTINFFNPQAVKALNKALLVTYYGI 65
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN----IIPTTSRNGDKVKG--FDIGTGANC 128
+W IP LCP +P R++YIH+I DL+ N +P NG K K DIG GANC
Sbjct: 66 RYWDIPKQYLCPPIPGRADYIHYIADLIQPNGTTPDLPAGDANGQKSKCRCLDIGVGANC 125
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYP++G + GW+FVG+D+ V++E A K V NP ++ I++R +S+
Sbjct: 126 IYPIIGHTEYGWTFVGTDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSKK--------- 176
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G++ E FD ICN
Sbjct: 177 ------------------------------------------IFDGIIMPDEYFDVTICN 194
Query: 249 PPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF S EEA G K S GG+ E+ C GGE F+ +I +S
Sbjct: 195 PPFHSSREEAEDGTLRKLSSLKGTKINKVQLNFGGSANELWCEGGEVRFLLNMISESQKY 254
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
++ W+TS+V ++ NL+ L +KL+ V V+ K QG LAW F
Sbjct: 255 QKNCGWFTSLVSKEKNLEKLYTKLKSVNVSEYKVIRMQQGTKSSRILAWRFA 306
>gi|195583572|ref|XP_002081591.1| GD11099 [Drosophila simulans]
gi|194193600|gb|EDX07176.1| GD11099 [Drosophila simulans]
Length = 307
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 162/342 (47%), Gaps = 72/342 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N P D+ +A Y F +G+ +++ + RELT++LL + L
Sbjct: 13 MHPRNVLRTQP-DYTKMAIKYKDFREQCQLELNGKVSVNFRNEKTLRELTKMLLKEYYDL 71
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ G L PT+ R NYI W+EDL+ N ++G DIG G++CIY LLGA
Sbjct: 72 DVDFAPGSLVPTLALRLNYILWLEDLMEP-------LNLQDIRGIDIGCGSSCIYSLLGA 124
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW + + +E+A KNVK N H+ LIE+
Sbjct: 125 KKNGWHMLALESKPQNIEYAMKNVKKN-HLESLIEVY----------------------- 160
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ--FDFCICNPPFFE 253
A+P +++ F SY +D +Q + FC+CNPPFF+
Sbjct: 161 ------------AQPDNTNIF-------KSYFE--------QDQQQLRYQFCLCNPPFFD 193
Query: 254 SMEEAGLN-----------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
S L P + G+ EE+ C GGE F+ RII++S+ K+ R YT+
Sbjct: 194 SNLPNPLGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDESLENKERVRIYTT 253
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
M+G K+N+ ++ L+++ V V TTEF QG T RW +AWSF
Sbjct: 254 MLGVKANVPRILDYLKELQVANVSTTEFHQGHTTRWAVAWSF 295
>gi|451985641|ref|ZP_21933854.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
aeruginosa 18A]
gi|451756690|emb|CCQ86377.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
aeruginosa 18A]
Length = 336
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 166/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + GR ID+ D A + R LL
Sbjct: 13 RKSASPLHPRNRHLGRY-DFPRLIAGSPELERFVILNPYGRQSIDFADPAAVKAFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IPDG LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 72 QQFYDVREWDIPDGYLCPPIPGRADYLHYLADLLGASHDGLIP----RGPGLRALDVGTG 127
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+
Sbjct: 128 ANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANPRFAAAIELRR------------ 175
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+P F L+GV E+FD
Sbjct: 176 -----------------------QPDRRQIFQ-------------SLIGV---DERFDMT 196
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ + E
Sbjct: 197 LCNPPFHASLDEATRGSRRKWKNLGKLDPTRTLPLLNFGGQGAELYCEGGEAAFLAGMAE 256
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 257 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 313
>gi|410649173|ref|ZP_11359565.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola agarilytica
NO2]
gi|410131356|dbj|GAC07964.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola agarilytica
NO2]
Length = 300
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 154/343 (44%), Gaps = 79/343 (23%)
Query: 29 FALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPT 87
A L YP+ + ++ G+ ID+ + ++ + L LL+H +G++ W IP G LCP
Sbjct: 1 MAKLCQSYPALRAHLISAKSGQQSIDFANPDSVKALNAALLIHYYGMSMWDIPAGYLCPP 60
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147
VP R++YIH I DLLS+ T G K+ G D+G GAN IYP++G+ GW FVGSD+
Sbjct: 61 VPGRADYIHGIADLLSAENNGKTP-TGSKITGLDVGVGANAIYPIIGSQTYGWRFVGSDI 119
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
DVAL A + +N + L+ +RK + ++
Sbjct: 120 DDVALSCANTLIDNNSRLKPLLAVRKQHSKDN---------------------------- 151
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA--------- 258
+ G+++ E F F +CNPPF +S +A
Sbjct: 152 -----------------------IFAGIIQPDEHFTFSLCNPPFHKSARDAATGSQRKMS 188
Query: 259 GL-----------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
GL K + G E+ C GGE AFI +I SV ++Q W+T
Sbjct: 189 GLERSKQRHSRKGKTSAAQGSKLNFAGQNNELWCEGGELAFIQSMISQSVDVQQQVDWFT 248
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+V + ++LK + + ++ VG + QGQ +AW+F
Sbjct: 249 CLVSKSAHLKAIETSVKYVGAKKFIKVDMGQGQKISRFVAWTF 291
>gi|237730785|ref|ZP_04561266.1| SAM-dependent methyltransferase [Citrobacter sp. 30_2]
gi|226906324|gb|EEH92242.1| SAM-dependent methyltransferase [Citrobacter sp. 30_2]
Length = 308
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 157/349 (44%), Gaps = 74/349 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N+++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 5 KPGLHPRNRHNGRY-DLATLCQVTPELTQFLTLTPGGEQSVDFANPQAVKALNKALLAHF 63
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANCI 129
+ + NW IPDG LCP VP R++YIH + DLL ++ IP + D+G GANCI
Sbjct: 64 YAVKNWDIPDGFLCPPVPGRADYIHHLADLLGETNGTIPANA------SVLDVGVGANCI 117
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
YPL+G GW F GS+ + A A+ V +NP ++ I +R+
Sbjct: 118 YPLIGVHEYGWRFTGSETSSEAFNSAQAIVNANPGLTRAIRLRR---------------- 161
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
+ +++ FN G++ EQ++ +CNP
Sbjct: 162 -------------------QKDATAIFN----------------GIIHKNEQYEATLCNP 186
Query: 250 PFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
PF +S A + + GG +E+ C GGE AFI ++I +S A +
Sbjct: 187 PFHDSAASARAGSERKRRNLGQDKDDALNFGGQQQELWCEGGEVAFIKKMIAESQAFGRQ 246
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L G V E QGQ +AW+F+
Sbjct: 247 VMWFTTLVSRGENLPPLYHALTDAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|295087410|emb|CBK68933.1| 23S rRNA m(6)A-1618 methyltransferase [Bacteroides xylanisolvens
XB1A]
Length = 311
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 166/357 (46%), Gaps = 76/357 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +H +NK++ DF LL YP + FV + G I++ + A + L + LL+
Sbjct: 3 QKGELHIRNKHN-GQYDFLLLIENYPPLKRFVSLNPLGVQTINFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS----SNIIPTTSRNGD----KVKGFDI 122
+G+ +W IP LCP +P R++YIH+I DL+ +N + T + + K + D+
Sbjct: 62 YYGIRYWDIPKQYLCPPIPGRADYIHYIADLIQPDRVANDLQTEEEDANEQKTKCRCLDV 121
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G + GW+FVGSD+ V++E A K V NP ++ I++R +S+
Sbjct: 122 GVGANCIYPIIGHTEYGWTFVGSDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSQK--- 178
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ G++ GE F
Sbjct: 179 ------------------------------------------------IFDGIIMPGEYF 190
Query: 243 DFCICNPPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRII 287
D ICNPPF S EEA G K S GG+ E+ C GGE FI +I
Sbjct: 191 DVTICNPPFHSSKEEAEDGTLRKLSSLKGTKVKKVQLNFGGSANELWCEGGEIRFILNMI 250
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S ++ W+TS+V ++ NL+ L +KL+ V + K QG LAW F
Sbjct: 251 SESQKYQKNCGWFTSLVSKEKNLEKLCAKLKSVNASEYKIIRMQQGTKSSRILAWRF 307
>gi|440738776|ref|ZP_20918300.1| 23S rRNA mA1618 methyltransferase [Pseudomonas fluorescens
BRIP34879]
gi|440380590|gb|ELQ17152.1| 23S rRNA mA1618 methyltransferase [Pseudomonas fluorescens
BRIP34879]
Length = 349
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 161/348 (46%), Gaps = 72/348 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N+++ DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 41 TLHPRNRHTGRY-DFPALIKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKSFYG 99
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+YPL+
Sbjct: 100 IQHWDIPADYLCPPVPGRADYVHFLADLLASGNDGKIPR-GSIVKVLDIGMGANCVYPLI 158
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G W+F+GS++ A+ A+ V+SN +S++I++R N +
Sbjct: 159 GYMEYRWNFLGSEVDPTAVAAAKAIVQSN-DLSKVIQLRLQPNPKQ-------------- 203
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+L+G++ GE+FD +CNPPF
Sbjct: 204 -------------------------------------ILLGLLEPGERFDLTLCNPPFHA 226
Query: 254 SMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 227 SMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHFAHK 286
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 287 VLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 334
>gi|292487752|ref|YP_003530625.1| hypothetical protein EAMY_1267 [Erwinia amylovora CFBP1430]
gi|428784688|ref|ZP_19002179.1| UPF0049 protein ybiN [Erwinia amylovora ACW56400]
gi|291553172|emb|CBA20217.1| UPF0049 protein ybiN [Erwinia amylovora CFBP1430]
gi|426276250|gb|EKV53977.1| UPF0049 protein ybiN [Erwinia amylovora ACW56400]
Length = 332
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 166/348 (47%), Gaps = 69/348 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N++ DFA L + +P PFV + G ID+ + NA + L + LL H
Sbjct: 29 EKTVLHPRNRH-RGRYDFAALIASHPPLAPFVAVNNWGSESIDFANPNAVKALNQALLHH 87
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + +W IP+G LCP VP R++YIH + DLL+ + R ++ D+G GAN IY
Sbjct: 88 FYQIAHWDIPEGSLCPPVPGRADYIHHLADLLAEDNRRVVPR---EINVLDVGCGANLIY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F GS++ A+ A + +NP ++ I +R+ +S++
Sbjct: 145 PLIGHSEYQWRFTGSEVNQRAMAAANAIIAANPGLNRAIRLRRQKDSQA----------- 193
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ GV+ E + +CNPP
Sbjct: 194 ----------------------------------------IFSGVIHKNELYQATLCNPP 213
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S +A GL+ + + GG +E+ C GGE AFI R+I++SV+ +
Sbjct: 214 FHASAADAHQGSQRKLRNLGLDRHSPLNFGGQQDELWCEGGELAFIRRMIDESVSFGRQC 273
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V RK NL L L + GV V+T + QGQ +AWSF+
Sbjct: 274 VWFTSLVSRKENLPELWRALEEAGVAAVRTIDMAQGQKQSRFIAWSFM 321
>gi|399000377|ref|ZP_10703104.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM18]
gi|398129883|gb|EJM19236.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM18]
Length = 340
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 164/351 (46%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKSTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKA 85
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+Y
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPR-GAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAVASAKAIVQSN-GLNKAIQLRQQTNPKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSVRKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIQTALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|383816288|ref|ZP_09971688.1| 23S rRNA mA1618 methyltransferase [Serratia sp. M24T3]
gi|383294836|gb|EIC83170.1| 23S rRNA mA1618 methyltransferase [Serratia sp. M24T3]
Length = 329
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 165/360 (45%), Gaps = 76/360 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +H +N++ DF L P E FV ++ G ID+ D A + L R LL
Sbjct: 17 QEKSGLHARNRHRSRY-DFPALIVSSPELEAFVAENKWGDLSIDFADPQAVKALNRALLR 75
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
H + + NW IP LCP +P R++YIH + DLL+++ IP G V DIG GA
Sbjct: 76 HFYQIENWDIPADYLCPPIPGRADYIHHLADLLATSNGGEIP----QGKNVAILDIGVGA 131
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F S++ +V++ A+K V +NP ++ + R
Sbjct: 132 NCIYPIIGLREYGWRFTASEIDEVSMAAAKKIVATNPLLTNQVRFRL------------- 178
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+A+P P + ++R E++D I
Sbjct: 179 --------------------QAKP------------------PRIFDTIIRHDERYDAVI 200
Query: 247 CNPPFF-----------ESMEEAGLNPK-----TSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF + GLN + + GG E+ C GGE AF+ R++E+S
Sbjct: 201 CNPPFHASAEEAAAGSQRKRDNLGLNRRGDKSELNFGGQHNELWCEGGEEAFVERMVEES 260
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T ++ +K+ L + L + G T V+T E QGQ +AW+F+ P+++
Sbjct: 261 AVKANNCLWFTVLISKKTTLPLIYDALEEAGATNVRTVEMAQGQKVSRFVAWTFLTPSQQ 320
>gi|355639680|ref|ZP_09051290.1| ribosomal RNA large subunit methyltransferase F [Pseudomonas sp.
2_1_26]
gi|354831728|gb|EHF15735.1| ribosomal RNA large subunit methyltransferase F [Pseudomonas sp.
2_1_26]
Length = 336
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 167/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + GR ID+ D A + R LL
Sbjct: 13 RKSASPLHPRNRHLGRY-DFPRLIAGSPELERFVILNPYGRQSIDFADPAAVKAFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IPDG LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 72 QQFYDVREWDIPDGYLCPPIPGRADYLHYLADLLGASHDGLIP----RGPGLRALDVGTG 127
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+ P ++
Sbjct: 128 ANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANPRFAAAIELRR------QPDRRQ 181
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
G L+GV E+FD
Sbjct: 182 IFQG------------------------------------------LIGV---DERFDMT 196
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ + E
Sbjct: 197 LCNPPFHASLDEATRGSRRKWKNLGKLDPTRTLPLLNFGGQGAELYCEGGEAAFLAGMAE 256
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 257 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 313
>gi|15599035|ref|NP_252529.1| SAM-dependent methyltransferase [Pseudomonas aeruginosa PAO1]
gi|116051870|ref|YP_789287.1| SAM-dependent methyltransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889876|ref|YP_002438740.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
LESB58]
gi|254242532|ref|ZP_04935854.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296387643|ref|ZP_06877118.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
PAb1]
gi|313109259|ref|ZP_07795227.1| hypothetical protein PA39016_001710068 [Pseudomonas aeruginosa
39016]
gi|386057165|ref|YP_005973687.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
M18]
gi|386067931|ref|YP_005983235.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
NCGM2.S1]
gi|392982432|ref|YP_006481019.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa DK2]
gi|416880132|ref|ZP_11921178.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa 152504]
gi|418585921|ref|ZP_13149967.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589798|ref|ZP_13153717.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|419757062|ref|ZP_14283407.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137957|ref|ZP_14645902.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
CIG1]
gi|421152347|ref|ZP_15611927.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
ATCC 14886]
gi|421158346|ref|ZP_15617607.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
ATCC 25324]
gi|421165832|ref|ZP_15624125.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
ATCC 700888]
gi|421172903|ref|ZP_15630659.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
CI27]
gi|421178987|ref|ZP_15636587.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
E2]
gi|421518386|ref|ZP_15965060.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa PAO579]
gi|81540183|sp|Q9HXG4.1|RLMF_PSEAE RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|122261017|sp|Q02RZ9.1|RLMF_PSEAB RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|254807088|sp|B7UVS7.1|RLMF_PSEA8 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|9950016|gb|AAG07227.1|AE004801_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115587091|gb|ABJ13106.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126195910|gb|EAZ59973.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218770099|emb|CAW25861.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310881729|gb|EFQ40323.1| hypothetical protein PA39016_001710068 [Pseudomonas aeruginosa
39016]
gi|334836692|gb|EGM15490.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa 152504]
gi|347303471|gb|AEO73585.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
M18]
gi|348036490|dbj|BAK91850.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
NCGM2.S1]
gi|375043595|gb|EHS36211.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051334|gb|EHS43803.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|384396817|gb|EIE43235.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317937|gb|AFM63317.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa DK2]
gi|403249293|gb|EJY62804.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
CIG1]
gi|404347868|gb|EJZ74217.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa PAO579]
gi|404525107|gb|EKA35383.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
ATCC 14886]
gi|404536809|gb|EKA46442.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
CI27]
gi|404539918|gb|EKA49357.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
ATCC 700888]
gi|404547685|gb|EKA56674.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
E2]
gi|404549689|gb|EKA58534.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
ATCC 25324]
Length = 336
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 167/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + GR ID+ D A + R LL
Sbjct: 13 RKSASPLHPRNRHLGRY-DFPRLIAGSPELERFVILNPYGRQSIDFADPAAVKAFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IPDG LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 72 QQFYDVREWDIPDGYLCPPIPGRADYLHYLADLLGASHDGLIP----RGPGLRALDVGTG 127
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+ P ++
Sbjct: 128 ANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANPRFAAAIELRR------QPDRRQ 181
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
G L+GV E+FD
Sbjct: 182 IFQG------------------------------------------LIGV---DERFDMT 196
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ + E
Sbjct: 197 LCNPPFHASLDEATRGSRRKWKNLGKLDPTRTLPLLNFGGQGAELYCEGGEAAFLAGMAE 256
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 257 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 313
>gi|340380803|ref|XP_003388911.1| PREDICTED: methyltransferase-like protein 16-like [Amphimedon
queenslandica]
Length = 464
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 174/362 (48%), Gaps = 83/362 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR-----IDWTDFNATRELTRVLLL 70
+HP+N +++ PDFA A +P+ EP + + ID++ + EL L
Sbjct: 1 MHPRNIFNKRKPDFAEYAKTHPALEPHLIKKATSKGEGFQYTIDFSSTQSLHELAAATLQ 60
Query: 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
H+ GL+ +P G L P++P R NYIHW+EDL+ V G DIG G CI+
Sbjct: 61 HEFGLSVDLPSGHLVPSIPQRLNYIHWVEDLVGKE---------SDVIGIDIGCGPLCIF 111
Query: 131 PLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
PLL ++ W F+ +++ +A +N+K N +++ +T
Sbjct: 112 PLLSCTINNNWKFIATEVQPDCTTYALENIKRN-------------------NLKPKIT- 151
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
+Q ++ + G +D +SY D QF FC+CNP
Sbjct: 152 -VIQVAPDVFLKGVVD-----------------TASY-----------DHTQFTFCMCNP 182
Query: 250 PFFESMEE--AGLN-------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
PF++ +E G + PKT G E + SGGE F+ I+++S+++ +WY
Sbjct: 183 PFYKDGDELKGGASRTGHRPVPKTLNTGNEIETMTSGGEVEFVRNIVKESMSIGTRIKWY 242
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF----------VPPARK 350
TSM+G+K +L + + L+++ V ++ T FVQG+T RWG+AWS+ +P RK
Sbjct: 243 TSMLGKKDSLAKIKNFLKELKVPVILDTTFVQGRTHRWGVAWSYDHSLMPSQEQLPQKRK 302
Query: 351 II 352
+I
Sbjct: 303 LI 304
>gi|312171865|emb|CBX80122.1| UPF0049 protein ybiN [Erwinia amylovora ATCC BAA-2158]
Length = 309
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 166/348 (47%), Gaps = 69/348 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N++ DFA L + +P PFV + G ID+ + NA + L + LL H
Sbjct: 6 EKTVLHPRNRH-RGRYDFAALIASHPPLAPFVAVNNWGSKSIDFANPNAVKALNQALLHH 64
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + +W IP+G LCP VP R++YIH + DLL+ + R ++ D+G GAN IY
Sbjct: 65 FYQIAHWDIPEGSLCPPVPGRADYIHHLADLLAEDNRRVVPR---EINVLDVGCGANLIY 121
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F GS++ A+ A + +NP ++ I +R+ +S++
Sbjct: 122 PLIGHSEYQWRFTGSEVNQRAMAAANAIIAANPGLNRAIRLRRQKDSQA----------- 170
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ GV+ E + +CNPP
Sbjct: 171 ----------------------------------------IFSGVIHKNELYQATLCNPP 190
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S +A GL+ + + GG +E+ C GGE AFI R+I++SV+ +
Sbjct: 191 FHASAADAHQGSQRKLRNLGLDRHSPLNFGGQQDELWCEGGELAFIRRMIDESVSFGRQC 250
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V RK NL L L + GV V+T + QGQ +AWSF+
Sbjct: 251 VWFTSLVSRKENLPELWRALEEAGVAAVRTIDMAQGQKQSRFIAWSFM 298
>gi|292898982|ref|YP_003538351.1| hypothetical protein EAM_1265 [Erwinia amylovora ATCC 49946]
gi|291198830|emb|CBJ45940.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
Length = 309
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 166/348 (47%), Gaps = 69/348 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N++ DFA L + +P PFV + G ID+ + NA + L + LL H
Sbjct: 6 EKTVLHPRNRH-RGRYDFAALIASHPPLAPFVAVNNWGSESIDFANPNAVKALNQALLHH 64
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + +W IP+G LCP VP R++YIH + DLL+ + R ++ D+G GAN IY
Sbjct: 65 FYQIAHWDIPEGSLCPPVPGRADYIHHLADLLAEDNRRVVPR---EINVLDVGCGANLIY 121
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F GS++ A+ A + +NP ++ I +R+ +S++
Sbjct: 122 PLIGHSEYQWRFTGSEVNQRAMAAANAIIAANPGLNRAIRLRRQKDSQA----------- 170
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ GV+ E + +CNPP
Sbjct: 171 ----------------------------------------IFSGVIHKNELYQATLCNPP 190
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S +A GL+ + + GG +E+ C GGE AFI R+I++SV+ +
Sbjct: 191 FHASAADAHQGSQRKLRNLGLDRHSPLNFGGQQDELWCEGGELAFIRRMIDESVSFGRQC 250
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V RK NL L L + GV V+T + QGQ +AWSF+
Sbjct: 251 VWFTSLVSRKENLPELWRALEEAGVAAVRTIDMAQGQKQSRFIAWSFM 298
>gi|84387363|ref|ZP_00990383.1| hypothetical protein V12B01_04948 [Vibrio splendidus 12B01]
gi|84377812|gb|EAP94675.1| hypothetical protein V12B01_04948 [Vibrio splendidus 12B01]
Length = 452
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 171/388 (44%), Gaps = 101/388 (26%)
Query: 6 RRRRREERPT--IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
++RR E+P +HP+N+++ DF LL + P + + + G I+++D A +
Sbjct: 106 QKRRSAEKPQGGLHPRNQHTGRY-DFELLVAALPELKEHLIKNPVGEDTINFSDPLAVKL 164
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L + LL H +G+ W IP G LCP +P R++YIH + D+L+S+ N VK DI
Sbjct: 165 LNKALLAHHYGVKHWDIPAGYLCPPIPGRADYIHRVADILNSDG-QGEPYNHASVKALDI 223
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++GA+ W + G+D+ V+++ A +SNP++ I R +SES
Sbjct: 224 GVGANCIYPIIGATEYKWRWTGTDVDSVSIKTANFIAESNPNLKGKIRARLQADSES--- 280
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ GV++D E++
Sbjct: 281 ------------------------------------------------IFKGVIKDNERY 292
Query: 243 DFCICNPPFFESMEEA---------------------GLNPKTSC--------------- 266
D ICNPPF S+EEA P+T+
Sbjct: 293 DVTICNPPFHSSLEEAEKGSQRKLDNLAANRAKKAGQSFKPETNKKPAKLDKSTTQNKPT 352
Query: 267 ---------GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKL 317
GG E+ C GGE AFI ++ +S W+T+++ +K N+ + S+L
Sbjct: 353 KQDKPTLNFGGQKSELWCPGGEAAFIMKMARESQLFATQVLWFTTLISKKDNVDMVRSEL 412
Query: 318 RKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
K+ V+ E QGQ +AW+F+
Sbjct: 413 GKLRAKQVEVVEMSQGQKVSRFIAWTFM 440
>gi|49087744|gb|AAT51492.1| PA3840, partial [synthetic construct]
Length = 337
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 167/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + GR ID+ D A + R LL
Sbjct: 13 RKSASPLHPRNRHLGRY-DFPRLIAGSPELERFVILNPYGRQSIDFADPAAVKAFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IPDG LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 72 QQFYDVREWDIPDGYLCPPIPGRADYLHYLADLLGASHDGLIP----RGPGLRALDVGTG 127
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+ P ++
Sbjct: 128 ANCIYPLLGHHEYGWRFVGADIGPQSLASAAAILAANPRFAAAIELRR------QPDRRQ 181
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
G L+GV E+FD
Sbjct: 182 IFQG------------------------------------------LIGV---DERFDMT 196
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ + E
Sbjct: 197 LCNPPFHASLDEATRGSRRKWKNLGKLDPTRTLPLLNFGGQGAELYCEGGEAAFLAGMAE 256
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 257 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 313
>gi|254228366|ref|ZP_04921793.1| methyltransferase [Vibrio sp. Ex25]
gi|262394450|ref|YP_003286304.1| RNA large subunit methyltransferase F [Vibrio sp. Ex25]
gi|151939172|gb|EDN58003.1| methyltransferase [Vibrio sp. Ex25]
gi|262338044|gb|ACY51839.1| RNA large subunit methyltransferase F [Vibrio sp. Ex25]
Length = 375
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 156/347 (44%), Gaps = 82/347 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L P +PFV + G I+++D NA + L + LL +G+ +W IPD LCP
Sbjct: 70 DFKKLVESEPQLKPFVIKNPKGEDSINFSDPNAVKMLNKALLAAYYGIEFWDIPDTYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LL + KVK DIG GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYIHRVAELLDGEAKGQYTHQ--KVKALDIGVGANCIYPIVGVTKYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +++ A+ V+ N LTGK + + D +
Sbjct: 188 VDPKSIQSAQTIVEHN----------------------RVLTGKIALVQQHSDAN----- 220
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA-------- 258
+ G+++ +++D CNPPF S E+A
Sbjct: 221 ------------------------IYRGIIQPNDRYDVTTCNPPFHRSAEDAAMVSQRKI 256
Query: 259 ----------GLNPKTS----------CGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
GL P+T+ GG E+ C GGE AFI ++ +S A
Sbjct: 257 DNLKANQRKKGLKPQTAQVKTSKPALNFGGQNAELWCEGGEAAFIRKMANESQAFAAQVL 316
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++
Sbjct: 317 WFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKVSRFVAWSYM 363
>gi|420105670|ref|ZP_14616128.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|394395440|gb|EJE71886.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O111:H11 str.
CVM9455]
Length = 294
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 155/340 (45%), Gaps = 74/340 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASI------LDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE AFI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT 335
W+TS+V R NL L L VG V + +G++
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKRWPRGKS 285
>gi|254236744|ref|ZP_04930067.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|424939291|ref|ZP_18355054.1| conserved hypothetical protein [Pseudomonas aeruginosa NCMG1179]
gi|126168675|gb|EAZ54186.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|346055737|dbj|GAA15620.1| conserved hypothetical protein [Pseudomonas aeruginosa NCMG1179]
Length = 336
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 167/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + GR ID+ D A + R LL
Sbjct: 13 RKSASPLHPRNRHLGRY-DFPRLIAGSPELERFVILNPYGRQSIDFADPAAVKAFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IPDG LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 72 QQFYDVREWNIPDGYLCPPIPGRADYLHYLADLLGASHDGLIP----RGPGLRALDVGTG 127
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+ P ++
Sbjct: 128 ANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANPRFAAAIELRR------QPDRRQ 181
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
G L+GV E+FD
Sbjct: 182 IFQG------------------------------------------LIGV---DERFDMT 196
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ + E
Sbjct: 197 LCNPPFHASLDEATRGSRRKWKNLGKLDPTRTLPLLNFGGQGAELYCEGGEAAFLAGMAE 256
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 257 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 313
>gi|398891582|ref|ZP_10644928.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM55]
gi|398186789|gb|EJM74150.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM55]
Length = 340
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 172/363 (47%), Gaps = 78/363 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ ++HP+N++ + DF L P + FV + G+ ID+ A R R LL
Sbjct: 26 KEKASLHPRNRH-QGRYDFPALIKSSPELKKFVIINPYGKESIDFASPEAVRVFNRALLK 84
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP VP R++Y+H++ DLL+S +IP G VK DIG GA
Sbjct: 85 SFYGIAHWDIPADYLCPPVPGRADYVHFLADLLASGNDGVIP----RGAAVKVLDIGMGA 140
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NC+YPL+G S W F+GSD+ A+ A+ ++SN +++ I++R+ N +
Sbjct: 141 NCVYPLIGYSDYRWQFLGSDIDATAIAAAKAIIQSN-GLNKAIQVRQQSNPKQ------- 192
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L G++ E+FD +
Sbjct: 193 --------------------------------------------ILTGLLESAERFDLTL 208
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG E+ C GGE F+T+++ +
Sbjct: 209 CNPPFHASLDEATRGSTRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEVRFVTQLVSE 268
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
SV + Q W++++V + SNL + + L K GV + E QGQ +AW+F PA+
Sbjct: 269 SVQVAQQVLWFSTLVSKASNLPAIQAALSKAGVLESQVVEMGQGQKQSRFVAWTFQTPAQ 328
Query: 350 KII 352
+ +
Sbjct: 329 QQV 331
>gi|416856932|ref|ZP_11912411.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa 138244]
gi|334841183|gb|EGM19818.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa 138244]
gi|453043480|gb|EME91210.1| 23S rRNA mA1618 methyltransferase [Pseudomonas aeruginosa
PA21_ST175]
Length = 336
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 167/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + GR ID+ D A + R LL
Sbjct: 13 RKSASPLHPRNRHLGRY-DFPRLIAGSPELERFVILNPYGRQSIDFADPAAVKAFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IPDG LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 72 QQFYDVREWDIPDGYLCPPIPGRADYLHYLADLLGASHDGLIP----RGPGLRALDVGTG 127
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+ P ++
Sbjct: 128 ANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANPRFAAAIELRR------QPDRRQ 181
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
G L+GV E+FD
Sbjct: 182 IFQG------------------------------------------LIGV---DERFDMT 196
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ + E
Sbjct: 197 LCNPPFHASLDEATRGSRRKWKNLGKLDPTRTLPLLNFGGQGAELYCEGGEAAFLAGMAE 256
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 257 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 313
>gi|107103360|ref|ZP_01367278.1| hypothetical protein PaerPA_01004429 [Pseudomonas aeruginosa PACS2]
Length = 336
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 167/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + GR ID+ D A + R LL
Sbjct: 13 RKSASPLHPRNRHLGRY-DFPRLIAGSPELERFVILNPYGRQSIDFADPAAVKAFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IPDG LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 72 QQFYDVREWDIPDGYLCPPIPGRADYLHYLADLLGTSHDGLIP----RGPGLRALDVGTG 127
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+ P ++
Sbjct: 128 ANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANPRFAAAIELRR------QPDRRQ 181
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
G L+GV E+FD
Sbjct: 182 IFQG------------------------------------------LIGV---DERFDMT 196
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ + E
Sbjct: 197 LCNPPFHASLDEATRGSRRKWKNLGKLDPTRTLPLLNFGGQGAELYCEGGEAAFLAGMAE 256
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 257 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 313
>gi|325278214|ref|ZP_08143707.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. TJI-51]
gi|324096654|gb|EGB95007.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. TJI-51]
Length = 316
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 167/351 (47%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++PT+HP+N++ + DF L +P F + G+P ID+ + A R R LL
Sbjct: 3 DKPTLHPRNRH-QGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALLKA 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP +P R++YIH DLL+++ + G +V+ DIG GANCIY
Sbjct: 62 QYGIQHWDIPADYLCPPIPGRADYIHVAADLLATDNAGEIPK-GAQVRALDIGVGANCIY 120
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG S W F+GSD+ VAL A+ V++N + + I +R+ N
Sbjct: 121 PLLGHSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAIALRQQAN-------------- 165
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
GH +L G+++ E+FD +CNPP
Sbjct: 166 ----------RGH---------------------------ILSGLLQPEERFDLTLCNPP 188
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F S +EA +PK + GG E+ C GGE F+T+++ +SV
Sbjct: 189 FHASRDEATRGSQRKWKNLGKQDPKRTLPLLNFGGQNNELWCEGGEIRFVTQLVSESVQY 248
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V + SNL + + L+K G V+ E QGQ +AWSF
Sbjct: 249 AGSVLWFTSLVSKASNLPGIEAALKKAGAKAVRVVEMGQGQKQSRMVAWSF 299
>gi|359784095|ref|ZP_09287297.1| 23S rRNA mA1618 methyltransferase [Pseudomonas psychrotolerans L19]
gi|359367984|gb|EHK68573.1| 23S rRNA mA1618 methyltransferase [Pseudomonas psychrotolerans L19]
Length = 308
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 159/357 (44%), Gaps = 71/357 (19%)
Query: 7 RRRREERPT-IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
RR RP +HP+N++ + DF L L P+ + FV + G ID+TD A R L
Sbjct: 5 RRPLPGRPAPLHPRNRH-QGSYDFPALMRLSPALKAFVAPTPRGNLSIDFTDPQAVRALN 63
Query: 66 RVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGT 124
R LL HG+ +W IP LCP +P R++Y+H + DLL+ R G + D+GT
Sbjct: 64 RALLALHHGVRDWDIPADFLCPPIPGRADYLHHLADLLAEGNGGRIPR-GATTRLLDVGT 122
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GAN +YPL+G GW FVGSD+ AL+ ++ + +NP + IE+R
Sbjct: 123 GANGVYPLIGFKEYGWHFVGSDIAPAALDAFKRTLAANPDCAAAIELRL----------- 171
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+ EP + + G+++ GE++
Sbjct: 172 ----------------------QPEPQA------------------IFAGILQPGERYAA 191
Query: 245 CICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIE 288
+CNPPF S +EA P + GG E+ C GGE AFI R+I
Sbjct: 192 TLCNPPFHASPDEAVRGSRRKWKNLGKTTGKQAPLLNFGGQAAELWCPGGEAAFIERMIR 251
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S W+T +V + SNL L + LR+ ++ QGQ LAW F
Sbjct: 252 ESRTFAAQVGWFTCLVSKASNLPPLQAALRREQAGEIRVVTMAQGQKQSRFLAWRFA 308
>gi|398937686|ref|ZP_10667395.1| putative SAM-dependent methyltransferase [Pseudomonas sp.
GM41(2012)]
gi|398166803|gb|EJM54894.1| putative SAM-dependent methyltransferase [Pseudomonas sp.
GM41(2012)]
Length = 340
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 164/351 (46%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+Y
Sbjct: 86 FYGVAHWDIPADYLCPPVPGRADYVHFLADLLASVNDGEIPR-GAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAVAAAKAIVQSN-GLNKAIQLRLQSNPKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIKTALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|418361470|ref|ZP_12962123.1| 23S rRNA mA1618 methyltransferase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|356687196|gb|EHI51780.1| 23S rRNA mA1618 methyltransferase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 315
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 154/350 (44%), Gaps = 72/350 (20%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ + +HP+N++ + P DF L P P VF + G +D+ D A + L + LL
Sbjct: 6 DRKSGLHPRNRH-QAPYDFDALCLRTPELRPLVFVNEHGTQTLDFADPAAVKALNKALLA 64
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGAN 127
+G+ W +P G LCP +P R +Y+H + DLL S+ +PT G V+ DIG GAN
Sbjct: 65 LHYGIAHWDLPAGYLCPPIPGRVDYLHRVADLLAESAGCVPT----GKGVRVLDIGVGAN 120
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLGA GW FVGSD+ V+++ A KSN + IE R N++
Sbjct: 121 CIYPLLGAREYGWRFVGSDIDPVSVKAAALLAKSN-GLGGQIECRHQGNAKH-------- 171
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
V G++ E+F +C
Sbjct: 172 -------------------------------------------VFRGIISPQERFALTLC 188
Query: 248 NPPFFESMEEAGLN------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
NPPF S++EA P + GG E+ C GGE F+ +I S
Sbjct: 189 NPPFHGSLDEASKGSERKLGKTVQGQPVLNFGGQKAELWCEGGEAGFLATMIVQSKEFAA 248
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++S+V +K NL L +VG V+ + QG LAWSF+
Sbjct: 249 QCLWFSSLVSKKENLPAAKKALAQVGARQVRVIDMAQGNKVSRILAWSFL 298
>gi|335042981|ref|ZP_08536008.1| hypothetical protein MAMP_02471 [Methylophaga aminisulfidivorans
MP]
gi|333789595|gb|EGL55477.1| hypothetical protein MAMP_02471 [Methylophaga aminisulfidivorans
MP]
Length = 305
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 157/357 (43%), Gaps = 73/357 (20%)
Query: 3 SKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATR 62
S ++ R + +HP+N +++ DF L + +P+ PFVF + G ID++ A +
Sbjct: 6 SHQKTAERSPQKRLHPRNHHNQGY-DFPSLIASHPTLAPFVFNNAFGNLSIDYSHAEAVK 64
Query: 63 ELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFD 121
L LL + + + W IP+G LCP +P R +YIH I DLL S + ++ D
Sbjct: 65 HLNAALLTYHYQIQGWDIPEGALCPPIPGRVDYIHHIADLLG------VSDQNNNIRMLD 118
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
IG GA+ IY LL + GW VGSD+ +L + N + L+ +R N
Sbjct: 119 IGIGASGIYSLLASHCYGWQCVGSDINQTSLNNVATILNKNKTLERLVTLRHQPNPHQ-- 176
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
+ G++ GE
Sbjct: 177 -------------------------------------------------IFEGIINQGEM 187
Query: 242 FDFCICNPPFFESMEEA---------GLNPKTSC-----GGTPEEMVCSGGERAFITRII 287
FD +CNPPF S EEA L KT+ GG+ E+ C+GGE+ F+ ++I
Sbjct: 188 FDVSVCNPPFHASAEEASKAYQQKQHNLKLKTNTNSLNFGGSAAELWCNGGEKLFLKKMI 247
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S + RW+TS+V + NL I ++K+G + +K + QG LAW+F
Sbjct: 248 RESQVFAEQCRWFTSLVSKIENLTPSIKLIKKLGASDIKQIDMHQGNKITRILAWTF 304
>gi|407072285|ref|ZP_11103123.1| 23S rRNA mA1618 methyltransferase [Vibrio cyclitrophicus ZF14]
Length = 433
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 169/382 (44%), Gaps = 95/382 (24%)
Query: 6 RRRRREERPT--IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
++RR E+P +HP+N+++ DF LL + P + + + G ++++D A +
Sbjct: 93 QKRRSAEKPQGGLHPRNQHT-GRYDFDLLVAALPELKEHLIKNPVGEDTVNFSDPLAVKL 151
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L + LL H +G+ W IP G LCP +P R++YIH + DLL+S+ N VK DI
Sbjct: 152 LNKALLAHHYGVKHWDIPAGYLCPPIPGRADYIHRVADLLNSDG-QGEPYNHASVKALDI 210
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++GA+ W G+D+ V+++ A +SN ++ I R +SES
Sbjct: 211 GVGANCIYPIIGATEYKWRCTGTDVDPVSVKTANFIAESNANLKGKIRTRLQADSES--- 267
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ GV++D E++
Sbjct: 268 ------------------------------------------------IFKGVIKDNERY 279
Query: 243 DFCICNPPFFESMEEA---------------------GLNPKTSC--------------- 266
D ICNPPF S+EEA P+T+
Sbjct: 280 DVTICNPPFHSSLEEAEKGSQRKLDNLAANRAKKAGQSFKPETNKKSVKLDKSTKQEKPT 339
Query: 267 ---GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323
GG E+ C GGE AFI ++ +S W+T+++ +K N+ + S+L K+
Sbjct: 340 LNFGGQKSELWCPGGEAAFIMKMARESQLFATQVLWFTTLISKKDNIDMVRSELGKLRAK 399
Query: 324 IVKTTEFVQGQTCRWGLAWSFV 345
VK E QGQ +AW+F+
Sbjct: 400 QVKVVEMSQGQKVSRFIAWTFM 421
>gi|424776042|ref|ZP_18203028.1| 23S rRNA mA1618 methyltransferase [Alcaligenes sp. HPC1271]
gi|422888703|gb|EKU31088.1| 23S rRNA mA1618 methyltransferase [Alcaligenes sp. HPC1271]
Length = 331
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 175/375 (46%), Gaps = 78/375 (20%)
Query: 1 MGSKKRRRRREERPT-------IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRI 53
M S K+ E PT +HP+N++ + DF L P FVF + G I
Sbjct: 1 MPSPKKGNSNAELPTSNKTAAQLHPRNRH-QGRYDFDALIKDTPELAEFVFVNPYGDQSI 59
Query: 54 DWTDFNATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
++ D NA + L R LL +G+ +W IP LCP +P R++Y+H++ DLL+++ T R
Sbjct: 60 NFADPNAVKTLNRALLKSFYGIAHWDIPADYLCPPIPGRADYVHYLADLLANSNKGTIPR 119
Query: 113 NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172
G+ V+ DIG GAN IYPL+G + GW F+GSD+ AL A + +NP +S I++R
Sbjct: 120 -GEAVRVLDIGVGANAIYPLIGHTEYGWQFLGSDIDADALTSARSIIHANPGLSAAIKLR 178
Query: 173 KVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL 232
+ +S H +
Sbjct: 179 Q------------------------------------------------QKSPRH---IF 187
Query: 233 VGVVRDGEQFDFCICNPPFFESMEEA---------GLN--------PKTSCGGTPEEMVC 275
G++ + FD +CNPPF S EEA GL P + GG E+ C
Sbjct: 188 KGLLGANDYFDLTLCNPPFHSSQEEAVSGSQRKWRGLGKAAPKQNAPVLNFGGQNTELWC 247
Query: 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT 335
GGE FI R+IE+SV + W++++V + SN+ +++ L+K VKT E QGQ
Sbjct: 248 EGGEALFIRRMIEESVTVGGQVLWFSTLVSKASNVPGVLNALKKAKAVKVKTVEMTQGQK 307
Query: 336 CRWGLAWSFVPPARK 350
+AW+F+ A +
Sbjct: 308 QSRFVAWTFLDAAAQ 322
>gi|420369229|ref|ZP_14869954.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
1235-66]
gi|391321555|gb|EIQ78278.1| ribosomal RNA large subunit methyltransferase F [Shigella flexneri
1235-66]
Length = 308
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 157/350 (44%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N+++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHNGRY-DLATLCQVTPELTQFLTLTPGGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IP+G LCP VP R++YIH + DLL ++ IP + DIG GANC
Sbjct: 63 YYAVANWDIPEGFLCPPVPGRADYIHHLADLLGETTGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + A A+ + NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSEAFSSAQAIINGNPGLTRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +S+ FN G++ EQ++ +CN
Sbjct: 162 --------------------QKDASAIFN----------------GIIHKNEQYEATLCN 185
Query: 249 PPFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A + + GG +E+ C GGE AFI ++I +S A +
Sbjct: 186 PPFHDSAASARAGSERKRRNLGQDKDDALNFGGQQQELWCEGGEVAFIKKMIAESQAFGR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L G V E QGQ +AW+F+
Sbjct: 246 QVMWFTTLVSRGENLPPLYHALTDAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|407688564|ref|YP_006803737.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291944|gb|AFT96256.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 331
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 163/384 (42%), Gaps = 110/384 (28%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HPKN + P L YP+ + F+ ++ G ID+T A + L LL H + L
Sbjct: 1 MHPKNLHKNGYP-MDTLCQTYPALKSFLVRAKSGNTSIDFTSPKAVKVLNSALLHHYYRL 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDK--------VKGFDIGTGA 126
+W IPDG LCP VP R++YIH I DLL S ++S G++ V+G DIG GA
Sbjct: 60 EYWDIPDGYLCPPVPGRADYIHGIADLLKST---SSSAQGEQRQQGKDQNVRGLDIGVGA 116
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
N IYP++G + WSFVGSD+ DVA++ A+ N ++ ++RK N S
Sbjct: 117 NAIYPIIGVTSYDWSFVGSDVDDVAVKSAKAIASKNSVLAHKFQVRKQANRAS------- 169
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ GV+ E+F F +
Sbjct: 170 --------------------------------------------IFNGVIEANERFTFTM 185
Query: 247 CNPPFFESMEEA--GLNPKTS--------------------------------------- 265
CNPPF +S +EA G KTS
Sbjct: 186 CNPPFHKSAQEALSGTRRKTSNLTRNKQKRSGTKFTDNHEQGFGHRTSKLQGKNAAYQGK 245
Query: 266 -----CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKV 320
G E+ C GGE AFI R++++SV++K W+T +V + ++LK + + +
Sbjct: 246 DANLNFAGQANELWCEGGELAFIQRMVKESVSVKDNVEWFTCLVSKSAHLKPIKTSIDYY 305
Query: 321 GVTIVKTTEFVQGQTCRWGLAWSF 344
G K + QG +AW+F
Sbjct: 306 GAAQCKVIDMGQGSKLSRFVAWTF 329
>gi|161501978|ref|YP_258193.2| 23S rRNA mA1618 methyltransferase [Pseudomonas protegens Pf-5]
gi|205829583|sp|Q4KHU0.2|RLMF_PSEF5 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|341579895|gb|AAY90349.2| conserved hypothetical protein [Pseudomonas protegens Pf-5]
Length = 341
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 167/357 (46%), Gaps = 72/357 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ D A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPQLIKSTPELGQFVILNPYGKESIDFADPAAVRVFNRALLKA 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S+ R G V+ D+G GANCIY
Sbjct: 86 FYGIAHWDIPADFLCPPVPGRADYVHFLADLLASHNQGEIPR-GAAVRVLDVGVGANCIY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GSD+ AL A+ V++N +++ I +R+ N +
Sbjct: 145 PLIGYSDYRWQFLGSDIDSTALAAAKAIVQAN-DLNKAISLRQQGNPKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ E+FD +CNPP
Sbjct: 193 ----------------------------------------ILTGLLDSTERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F S++EA P + GG E+ C GGE F++++I +S ++
Sbjct: 213 FHASLDEATRGSQRKWRALGKADPKRKLPVLNFGGQARELWCEGGEIRFVSQLISESASV 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W++++V + SNL + S L+K G + E QGQ +AW+F A++
Sbjct: 273 GQQVLWFSTLVSKASNLPAIESALKKAGALESQVVEMSQGQKQSRFVAWTFKDKAQQ 329
>gi|398853020|ref|ZP_10609656.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM80]
gi|398242215|gb|EJN27836.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM80]
Length = 339
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 163/351 (46%), Gaps = 72/351 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKTTPELAKFVITNPYGKESIDFASPDAVRVFNRALLKS 85
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP LCP VP R++Y+H++ DLL+S R G V DIG GANC+Y
Sbjct: 86 FYGIQHWDIPADYLCPPVPGRADYVHFLADLLASMNDGKVPR-GAIVNVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN ++++I++R +N +
Sbjct: 145 PLIGNSEYRWHFLGSEIDPTAVAAAKAIVQSN-DLNKVIQLRLQENRKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILIGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGRADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESANF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++++V + SNL + L+K GV + E QGQ +AW+F
Sbjct: 273 QHKVLWFSTLVSKASNLPAIEIALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|90412625|ref|ZP_01220627.1| hypothetical SAM-dependent methyltransferase [Photobacterium
profundum 3TCK]
gi|90326433|gb|EAS42845.1| hypothetical SAM-dependent methyltransferase [Photobacterium
profundum 3TCK]
Length = 350
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 165/365 (45%), Gaps = 91/365 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N +S+ DF L P FV ++ G +D++D A + L + LL H + +
Sbjct: 27 LHPRNPHSQRY-DFDALILSCPDLALFVAENQFGDLSVDFSDPAAVKMLNKALLHHFYNV 85
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYP 131
NW IP G LCP +P R++YIH I DLL+ + +IP G + G DIG GANC+YP
Sbjct: 86 ENWDIPPGYLCPPIPGRADYIHHIADLLAKSNEGVIP----QGKHINGLDIGMGANCVYP 141
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G GW FVGSD+ ++++ A+ V+SN ++ I+ R S++
Sbjct: 142 IIGHRAYGWRFVGSDVDALSIKSAKFIVESNRSLAGGIKCRLQKKSDN------------ 189
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ G++ + FDF +CNPPF
Sbjct: 190 ---------------------------------------IYTGIINANDIFDFTMCNPPF 210
Query: 252 FESMEEA------------------GLNPKTSC-------------GGTPEEMVCSGGER 280
S+EEA G N K GG E+ C GGE
Sbjct: 211 HASLEEAMAGSERKVRNLSANTHKKGSNKKAELFAKSNTNKPILNFGGQKAELWCPGGEA 270
Query: 281 AFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340
AFI R+I +S + WY+++V +K NL L L++V V+T + QGQ +
Sbjct: 271 AFIQRMITESSDKPENCFWYSTLVSKKENLPALYKALKQVNAVDVRTIDMAQGQKVTRVV 330
Query: 341 AWSFV 345
AW+F+
Sbjct: 331 AWTFL 335
>gi|421844460|ref|ZP_16277618.1| 23S rRNA mA1618 methyltransferase [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|411774615|gb|EKS58105.1| 23S rRNA mA1618 methyltransferase [Citrobacter freundii ATCC 8090 =
MTCC 1658]
Length = 308
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 157/350 (44%), Gaps = 74/350 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N+++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHNGRY-DLATLCQVTPELTQFLTLTPGGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL +S IP + DIG GANC
Sbjct: 63 FYAVKNWDIPDGFLCPPVPGRADYIHHLADLLGETSGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
I+PL+G GW F GS+ + A A+ + NP ++ I +R+
Sbjct: 117 IHPLIGVHEYGWRFTGSESSSEAFNSAQAIINGNPGLTRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +S+ FN G++ EQ++ +CN
Sbjct: 162 --------------------QKDASAIFN----------------GIIHKNEQYEATLCN 185
Query: 249 PPFFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A + + GG +E+ C GGE AFI ++I +S A +
Sbjct: 186 PPFHDSAASARAGSERKRRNLGQDKDDALNFGGQQQELWCEGGEVAFIKKMIVESQAFGR 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L G V E QGQ +AW+F+
Sbjct: 246 QVMWFTTLVSRGENLPPLYHALTDAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|336404749|ref|ZP_08585440.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
1_1_30]
gi|335941147|gb|EGN03006.1| ribosomal RNA large subunit methyltransferase F [Bacteroides sp.
1_1_30]
Length = 311
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 165/357 (46%), Gaps = 76/357 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +H +NK++ DF LL YP + FV + G I++ + A + L + LL+
Sbjct: 3 QKGELHIRNKHN-GQYDFLLLIENYPPLKRFVSLNPLGVQTINFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS----SNIIPTTSRNGD----KVKGFDI 122
+G+ +W IP LCP +P R++YIH+I DL+ +N + T + + K + D+
Sbjct: 62 YYGIRYWDIPKQYLCPPIPGRADYIHYIADLIQPDRVANDLQTEEEDANEQKTKCRCLDV 121
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G + GW+FVGSD+ V++E A K V NP ++ I++R +S
Sbjct: 122 GVGANCIYPIIGHTEYGWTFVGSDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSRK--- 178
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ G++ GE F
Sbjct: 179 ------------------------------------------------IFDGIIMPGEYF 190
Query: 243 DFCICNPPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRII 287
D ICNPPF S EEA G K S GG+ E+ C GGE FI +I
Sbjct: 191 DVTICNPPFHSSKEEAEDGTLRKLSSLKGTKVKKVQLNFGGSANELWCEGGEIRFILNMI 250
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S ++ W+TS+V ++ NL+ L +KL+ V + K QG LAW F
Sbjct: 251 SESQKYQKNCGWFTSLVSKEKNLEKLCAKLKSVNASEYKIIRMQQGTKSSRILAWRF 307
>gi|238749886|ref|ZP_04611390.1| Ribosomal RNA large subunit methyltransferase F [Yersinia rohdei
ATCC 43380]
gi|238711815|gb|EEQ04029.1| Ribosomal RNA large subunit methyltransferase F [Yersinia rohdei
ATCC 43380]
Length = 335
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 166/369 (44%), Gaps = 78/369 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ D A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISIDFADPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 83 HFYGIEYWDIPADFLCPPIPGRADYVHHLADLLASCNGGVIP----QGKNIAVLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + +++ + ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDSQALSAAKMVVSMNPTLKNTLRLKQQKDPQA------- 191
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ E++D +
Sbjct: 192 --------------------------------------------IFEGILAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKGEVAAKPVQNFGGKNSELWCDGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W+T+++ +K+ L + LR V+T + QGQ +AW+F+ P ++
Sbjct: 268 ATKAQNCFWFTALISKKTTLPAIYHALRYANAVEVRTIDMAQGQKVSRFVAWTFLTPEQQ 327
Query: 351 IISPHVAEK 359
+ VAE+
Sbjct: 328 --AAWVAER 334
>gi|447915444|ref|YP_007396012.1| 23S rRNA mA1618 methyltransferase [Pseudomonas poae RE*1-1-14]
gi|445199307|gb|AGE24516.1| 23S rRNA mA1618 methyltransferase [Pseudomonas poae RE*1-1-14]
Length = 349
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 161/348 (46%), Gaps = 72/348 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N+++ DF L P F+ + G+ ID+ +A R R LL +G
Sbjct: 41 TLHPRNRHTGRY-DFPALIKTTPELAQFLIINPYGKESIDFASPDAVRVFNRALLKSFYG 99
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+YPL+
Sbjct: 100 IQHWDIPADYLCPPVPGRADYVHFLADLLASGNDGKIPR-GSIVKVLDIGMGANCVYPLI 158
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G W+F+GS++ A+ A+ V+SN +S++I++R N +
Sbjct: 159 GYMEYRWNFLGSEVDPTAVAAAKAIVQSN-DLSKVIQLRLQPNPKQ-------------- 203
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+L+G++ GE+FD +CNPPF
Sbjct: 204 -------------------------------------ILLGLLEPGERFDLTLCNPPFHA 226
Query: 254 SMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 227 SMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHFAHK 286
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 287 VLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 334
>gi|420257812|ref|ZP_14760563.1| 23S rRNA mA1618 methyltransferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404514758|gb|EKA28542.1| 23S rRNA mA1618 methyltransferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 335
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 160/360 (44%), Gaps = 76/360 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISIDFASPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G V DIG GA
Sbjct: 83 HFYGIEYWDIPADFLCPPIPGRADYVHHLADLLASCNDGVIP----QGKNVAVLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + +++ N ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDPQALSAAKMVVSMNPTLKNTLRLKQQKNPQA------- 191
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ E++D +
Sbjct: 192 --------------------------------------------IFDGILAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKSEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P ++
Sbjct: 268 ATKAQNCFWFTSLISKKTTLPAIYHALRYANAVEVRTIDMAQGQKVSRFVAWTFLTPEQQ 327
>gi|299146533|ref|ZP_07039601.1| methyltransferase [Bacteroides sp. 3_1_23]
gi|298517024|gb|EFI40905.1| methyltransferase [Bacteroides sp. 3_1_23]
Length = 309
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 162/352 (46%), Gaps = 74/352 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +NK++ DF LL YP + FV + G I++ + A + L + LL+ +G+
Sbjct: 7 LHIRNKHN-GQYDFPLLMENYPPLKRFVSLNPLGIQTINFFNPQAVKALNKALLVTYYGI 65
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN----IIPTTSRNGDKVKG--FDIGTGANC 128
+W IP LCP +P R++YIH+I DL+ N +P NG K K DIG GANC
Sbjct: 66 RYWDIPKQYLCPPIPGRADYIHYIADLIQPNGTTPDLPAGDANGQKSKCRCLDIGVGANC 125
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYP++G + GW+FVG+D+ V++E A K V NP ++ I++R +S+
Sbjct: 126 IYPIIGHTEYGWTFVGTDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSKK--------- 176
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ G++ E FD ICN
Sbjct: 177 ------------------------------------------IFDGIIMPDEYFDVTICN 194
Query: 249 PPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF S EA G K S GG+ E+ C GGE F+ +I +S
Sbjct: 195 PPFHSSRAEAEDGTLRKLSSLKGTKINKVQLNFGGSANELWCEGGEVRFLLNMISESQKY 254
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
++ W+TS+V ++ NL+ L +KL+ V V+ K QG LAW F
Sbjct: 255 QKNCEWFTSLVSKEKNLEKLYTKLKSVNVSEYKVIRMQQGTKSSRILAWRFA 306
>gi|123443064|ref|YP_001007038.1| putative SAM-dependent methyltransferase [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|205829616|sp|A1JU40.1|RLMF_YERE8 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|122090025|emb|CAL12883.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 335
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 160/360 (44%), Gaps = 76/360 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISIDFASPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G V DIG GA
Sbjct: 83 HFYGIEYWDIPADFLCPPIPGRADYVHHLADLLASCNDGVIP----QGKNVAVLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + +++ N ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDPQALSAAKMVVSMNPTLKNTLRLKQQKNPQA------- 191
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ E++D +
Sbjct: 192 --------------------------------------------IFDGILAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKSEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P ++
Sbjct: 268 ATKAQNCFWFTSLISKKTTLPAIYHALRYANAVEVRTIDMAQGQKVSRFVAWTFLTPEQQ 327
>gi|406677798|ref|ZP_11084978.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
AMC35]
gi|404623605|gb|EKB20455.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
AMC35]
Length = 323
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 154/353 (43%), Gaps = 75/353 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ + +H +N++ DF L P VF + G ID+ D +A + L R LL
Sbjct: 15 DRKSGLHSRNRHQAGY-DFEALCLRTPELAAHVFINDYGTRTIDFADPDAVKTLNRALLA 73
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGAN 127
H +G+ +W +P G LCP +P R +Y+HW DLL S+ +PT G V+ DIG GAN
Sbjct: 74 HHYGIAHWDLPAGYLCPPIPGRVDYLHWAADLLAESAGQLPT----GKGVRVLDIGVGAN 129
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLGA GW FVGSD+ V+++ A KSN + IE R
Sbjct: 130 CIYPLLGAREYGWRFVGSDIDPVSVKAATLLAKSN-GLGNQIECR--------------- 173
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+Q N V G++ E+F +C
Sbjct: 174 ----LQGNPNH--------------------------------VFRGIIGPKERFALTLC 197
Query: 248 NPPFFESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S+EEA P + GG E+ C GGE AF+ +I S
Sbjct: 198 NPPFHASLEEASKGTERKLRNLGKEVTGTPVLNFGGQKAELWCEGGEAAFLANMIAQSKE 257
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++S+V +K NL L +VG V+ + QG LAWSF+
Sbjct: 258 FATQCLWFSSLVSKKENLPGAKKALSRVGARQVRVIDMAQGNKVSRILAWSFL 310
>gi|443468268|ref|ZP_21058498.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
pseudoalcaligenes KF707]
gi|442897385|gb|ELS24327.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
pseudoalcaligenes KF707]
Length = 331
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 162/351 (46%), Gaps = 78/351 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L P FV + G+ ID+ D A + R LL +G+
Sbjct: 23 LHPRNRH-QGRYDFPQLIQGSPELARFVITNPYGKESIDFADPEAVKVFNRALLRQFYGI 81
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYP 131
W IP G LCP +P R++Y+H + DLL+++ +IP G ++ DIG GANCIYP
Sbjct: 82 RHWDIPPGYLCPPIPGRADYLHGLADLLAADNGGVIP----RGKGLQALDIGVGANCIYP 137
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G GW F G+D+ AL+ A V SN ++ I++R+
Sbjct: 138 LIGHQEYGWHFTGADIDPTALDSALAIVGSN-QLTSAIDLRR------------------ 178
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+A P + G++ GE+FD +CNPPF
Sbjct: 179 ---------------QAAPKQ------------------IFKGLIAPGERFDLTLCNPPF 205
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S++EA P + GG E+ C GGE AF+ R++++S +
Sbjct: 206 HSSLDEATRGSRRKWKNLGKQAPERKLPVLNFGGQGAELWCEGGESAFLQRMVDESRQFR 265
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++S+V + N+ + ++LR+ ++T E QGQ +AW+F+
Sbjct: 266 DQVLWFSSLVSKGGNVPGMEARLRRSDAVEIRTVEMAQGQKQSRFVAWTFL 316
>gi|365539016|ref|ZP_09364191.1| 23S rRNA mA1618 methyltransferase [Vibrio ordalii ATCC 33509]
Length = 344
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 160/359 (44%), Gaps = 85/359 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD-HG 74
+HP+N++ + DF L + P+ + FV + G P I+++D A + + LL H H
Sbjct: 27 LHPRNQH-QGQYDFPALINTLPALKAFVIRNPSGEPSINFSDAMAVKMFNKALLAHHYHV 85
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++YIH + DL+ + S +KV+ DIG GANCIYP++G
Sbjct: 86 THWDIPAGYLCPPIPGRADYIHRVADLM---LDECPSIKHEKVQALDIGVGANCIYPIVG 142
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW +VGSD+ ++++ A V N ++ IE R +++
Sbjct: 143 VAEYGWRYVGSDIDPISIQSANLVVNGNASLNGRIECRLQSDAKH--------------- 187
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ ++++ E++D CNPPF S
Sbjct: 188 ------------------------------------IFKQIIQENERYDLTTCNPPFHAS 211
Query: 255 MEE-----------------------AGLNPKTS------CGGTPEEMVCSGGERAFITR 285
E AG + S GG E+ C GGE AFI
Sbjct: 212 QVEAQQGSERKLKNLQRNRVKKGQEIAGQDANRSKAVTLNFGGQKAELWCPGGEAAFIKN 271
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ +S Q W+T+++ +K N++++ +L KVG +V+ E QGQ +AWSF
Sbjct: 272 MAFESQHYAQQVLWFTTLISKKENVRWMQKQLDKVGAAVVRVVEMQQGQKVSRFIAWSF 330
>gi|296412617|ref|XP_002836019.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629819|emb|CAZ80176.1| unnamed protein product [Tuber melanosporum]
Length = 377
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 64/299 (21%)
Query: 62 RELTRVLLLHDHGLNWWIPDGQLCPTVPN--RSNYIHWIEDLLSS--NIIPTTSRNGDKV 117
RELT+ LL D GLN +P +LCPTVPN R NY+ WI+DLL S N+ + +V
Sbjct: 13 RELTKCLLHRDFGLNLALPSDRLCPTVPNRFRLNYVLWIQDLLDSTGNLENDEFDSTREV 72
Query: 118 KGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176
G D+GTGA+CIYPLLG +L GW F+ +D+ +LE+A +NV+ N KV +
Sbjct: 73 VGLDVGTGASCIYPLLGCALRDGWKFIATDIDGKSLEYARENVRRNKE--------KVGD 124
Query: 177 SESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236
DE M + D++ P +G+
Sbjct: 125 ----------------LDERIMVLDNSPDDDIFPVGK-------------------LGI- 148
Query: 237 RDGEQFDFCICNPPFFESME-------EAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
E DF +CNPPF+ S++ + L P ++C GT EMVC GGE +F+ ++
Sbjct: 149 ---EMLDFTMCNPPFYASIDDMLDSARQKDLPPSSACTGTTTEMVCPGGETSFVALMLNQ 205
Query: 290 SVALKQTF----RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S+ WYTSM+G++S+++ L+ ++ K+ TEF QG T RWG+AWSF
Sbjct: 206 SLQFCSILGFKNTWYTSMLGKRSSVESLVPEI-KLHTQNYAITEFKQGSTRRWGVAWSF 263
>gi|334122756|ref|ZP_08496792.1| rRNA (adenine-N(6)-)-methyltransferase [Enterobacter hormaechei
ATCC 49162]
gi|333391871|gb|EGK62980.1| rRNA (adenine-N(6)-)-methyltransferase [Enterobacter hormaechei
ATCC 49162]
Length = 303
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 159/355 (44%), Gaps = 83/355 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D L P+ + F+ + G P +++ D A + L + LL H
Sbjct: 4 QKPGLHPRNRHRSRY-DMKALCQSCPALQDFIVQTPAGEPSVNFADPLAVKTLNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ W IP+G LCP VP R++Y+H + DLL+ + ++P + DIGTGAN
Sbjct: 63 FYGVTHWDIPEGFLCPPVPGRADYVHHLADLLADDNGGVVPK------QATVLDIGTGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPL+GA W F GS+ A A+ + +NP +S + +R+
Sbjct: 117 LIYPLIGAHEYQWRFTGSETGAEAFASAQAIINANPGLSRAVRLRR-------------- 162
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ +++ FN G++ E +D +C
Sbjct: 163 ---------------------QKDAAAIFN----------------GIIHKNEHYDATLC 185
Query: 248 NPPFFES-----------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF +S E+ LN GG +E+ C GGE AFI R+I +S
Sbjct: 186 NPPFHDSAASARAGSERKRRNLGQAEDGALN----FGGQQQELWCEGGEVAFILRMIAES 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ +W+T++V R NL L L VG V E QGQ +AW+F+
Sbjct: 242 KGFGRQVKWFTTLVSRGDNLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 296
>gi|238799040|ref|ZP_04642499.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
mollaretii ATCC 43969]
gi|238717093|gb|EEQ08950.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
mollaretii ATCC 43969]
Length = 353
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 160/357 (44%), Gaps = 76/357 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ D A + L R LL
Sbjct: 36 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISIDFADPLAVKMLNRALLK 94
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++YIH + DLL+S +IP G + DIG GA
Sbjct: 95 HFYGIEYWDIPADFLCPPIPGRADYIHHLADLLASCNDGVIP----EGKNIALLDIGVGA 150
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + +++ + ++
Sbjct: 151 NCIYPIIGQREYGWRFTGTDIDPQALSAAKMVVSMNPTLRNTLRLKQQKDPQA------- 203
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ E++D +
Sbjct: 204 --------------------------------------------IFEGILAVNERYDATL 219
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 220 CNPPFHGSAEEAAATTRRKLHKLGKGEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVVES 279
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347
++ W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P
Sbjct: 280 ATKAKSCFWFTSLISKKTTLPAIYHALRYANAVEVRTIDMAQGQKVSRFVAWTFLTP 336
>gi|157123130|ref|XP_001660022.1| hypothetical protein AaeL_AAEL009401 [Aedes aegypti]
gi|108874515|gb|EAT38740.1| AAEL009401-PA [Aedes aegypti]
Length = 462
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 184/388 (47%), Gaps = 77/388 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + P DF L P +G+ ++D+ D A + LT LL D GL
Sbjct: 7 MHPRNIYRQKP-DFKALVKQCPELTAVTTVDLNGKLKLDYKDKKALQLLTTCLLKRDFGL 65
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P +L PT+P R NYI W+EDL + + SR +V+G DIG GA+CIYPLLG
Sbjct: 66 QIDLPPDKLVPTLPLRLNYILWLEDL--EDALGWKSR--PEVRGLDIGCGASCIYPLLGV 121
Query: 136 --SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
S W VG ++ + ++ A KNV+ N S+QE
Sbjct: 122 VHSKHRWRMVGLELLEDSVMAARKNVEGN-------------------SLQE-------- 154
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
++D + S S +L + + E+FDFC+CNPPFF+
Sbjct: 155 ---------YIDVVQQKSGDGS---------------ILKDFMGEKERFDFCMCNPPFFD 190
Query: 254 SMEEAGLNPKTS--------CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
+ A +TS G+ +E+ GGE F+ RII++S+ LK+ YTSM+G
Sbjct: 191 DHDGAVHENRTSQRKEPPNASTGSDKELRIEGGELRFLERIIDESLELKERITVYTSMIG 250
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAE-----KK 360
K N + ++ +++ ++ V TT F QG T RWG+AWSF A P E +K
Sbjct: 251 HKKNFEEILRIMKRRSISNVTTTRFCQGNTTRWGIAWSFSSAALLANVPDRFEQESSNRK 310
Query: 361 NLSFMLEGVQRQFSALDVLQSIETFFSA 388
++ LEG + L+ +E F SA
Sbjct: 311 SVGKPLEG------KILSLEDVENFDSA 332
>gi|294637084|ref|ZP_06715398.1| putative methyltransferase YbiN [Edwardsiella tarda ATCC 23685]
gi|451965571|ref|ZP_21918829.1| 23S rRNA methyltransferase RlmF [Edwardsiella tarda NBRC 105688]
gi|291089712|gb|EFE22273.1| putative methyltransferase YbiN [Edwardsiella tarda ATCC 23685]
gi|451315691|dbj|GAC64191.1| 23S rRNA methyltransferase RlmF [Edwardsiella tarda NBRC 105688]
Length = 308
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 159/350 (45%), Gaps = 67/350 (19%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R ++ +HP+N++ + D A L P+ PF+ + G ID+ D A R L + LL
Sbjct: 11 RRQKARLHPRNRH-QGRYDMAALCQASPALRPFLRTTPRGETSIDFADPLAVRALNQALL 69
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
+G+ W IP LCP +P R++Y+H++ DLL+S G + DIGTGANC
Sbjct: 70 AQVYGIAQWDIPAQFLCPPIPGRADYLHYLADLLASQCADGQIPRGAQTCVLDIGTGANC 129
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPLLG + GW F SD++ AL A +++NP ++ I +R+
Sbjct: 130 IYPLLGQAEYGWRFTASDISPQALAAAAAIIQANPGMATRIRLRR--------------- 174
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +P Q+ +H G+++ GE++ +CN
Sbjct: 175 ------------------QRQP------------QALFH------GIIKPGERYAATMCN 198
Query: 249 PPFFESMEEAG---------LNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALK 294
PPF EA L T+ GG +E+ C GGE+ FI R+I +S
Sbjct: 199 PPFHRDAAEAAAGSQRKRTNLGLATTAADLNFGGQADELWCPGGEQGFILRMIAESREFA 258
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V R+ L L LR V V+ QGQ +AW F
Sbjct: 259 EQVGWFTSLVSRRETLPALRKALRAVQAREVREVTMAQGQKVSRFIAWRF 308
>gi|393758693|ref|ZP_10347513.1| 23S rRNA mA1618 methyltransferase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393163129|gb|EJC63183.1| 23S rRNA mA1618 methyltransferase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 331
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 165/351 (47%), Gaps = 77/351 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L P FVF + G I++ D NA + L R LL +G+
Sbjct: 23 LHPRNRH-QGRYDFDTLIKETPELAAFVFVNPYGDQSINFADPNAVKALNRALLKSFYGI 81
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYP 131
W IP L P +P R++Y+H++ D+L+++ IP G+ V+ DIG GAN IYP
Sbjct: 82 AHWDIPANYLSPPIPGRADYVHYLADVLANSNKGSIPC----GEAVRVLDIGVGANAIYP 137
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G + GW F+G+D+ AL A + +NP +S I++R+ + +P+
Sbjct: 138 LIGHAEYGWQFLGTDIDASALTSARTIIHANPGLSAAIKLRQ----QKSPA--------- 184
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ GV+ + D +CNPPF
Sbjct: 185 --------------------------------------HIFKGVLGANDYIDLTLCNPPF 206
Query: 252 FESMEEA---------GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S++EA GL P + GG E+ C GGE FI R+IE+S +
Sbjct: 207 HSSLDEALSGSQRKWRGLGKAVPKQQAPVLNFGGQHAELWCEGGEARFIRRMIEESTIVG 266
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ W++S+V + SNL ++S LRK ++T E QGQ +AW+F+
Sbjct: 267 RQVLWFSSLVSKASNLPGILSALRKAKAFKIQTVEMTQGQKQSRFVAWTFL 317
>gi|421618694|ref|ZP_16059669.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri KOS6]
gi|409779447|gb|EKN59105.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri KOS6]
Length = 324
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 161/354 (45%), Gaps = 72/354 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R + +HP+N+++ DF L + P +V + G+ ID+ + +A + R LL
Sbjct: 9 RPSKAALHPRNRHTGRY-DFPQLIAACPELAEYVIVNPYGKQSIDFANPDAVKVFNRALL 67
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
+G+ W IP G LCP VP R++Y+H + DLL + T R G ++ D+GTGANC
Sbjct: 68 GQFYGIEHWDIPPGYLCPPVPGRADYLHGLADLLGQDQGGTIPRGG-AIQALDVGTGANC 126
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F G+D+ AL A + +N +++ IE+R+ ++
Sbjct: 127 IYPLIGHREYGWHFAGTDIDATALASARTIISAN-GLAKAIELRQQAAAKQ--------- 176
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ GV+ ++FD +CN
Sbjct: 177 ------------------------------------------IFKGVLLPEDRFDLTLCN 194
Query: 249 PPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
PPF S EA P + GG E+ C GGE AFI R+ E S
Sbjct: 195 PPFHASQAEASSGSQRKWRNLGRLDPSRKLPALNFGGQAAELWCEGGEAAFIARMAEQSA 254
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++++V + +N+ LI++L+++G ++T + QGQ +AW+++
Sbjct: 255 LFTGQVYWFSTLVSKGANVTPLITRLKRLGARRIQTVDMAQGQKKSRFVAWTYL 308
>gi|414561734|ref|NP_715776.3| 23S rRNA (adenine1618-N6)-methyltransferase RlmF [Shewanella
oneidensis MR-1]
gi|205829723|sp|Q8EKF9.2|RLMF_SHEON RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|410519480|gb|AAN53221.2| 23S rRNA (adenine1618-N6)-methyltransferase RlmF [Shewanella
oneidensis MR-1]
Length = 365
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 163/361 (45%), Gaps = 76/361 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N + DF L + +P + FV + G ID+ D A + L LL
Sbjct: 49 EKKTLHPRNVHLHGY-DFVALMASFPKLKAFVRPTAYGALSIDFADPLAVKNLNAALLKQ 107
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ +++W IP G LCP +P R +Y+H++ DLL T+ ++V DIGTGAN IY
Sbjct: 108 HYQIDFWDIPKGALCPPIPGRVDYVHYLADLLFEG---ATAPRVEQVCALDIGTGANGIY 164
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
+LG + GW FV SD+ +L NV+ R +DN
Sbjct: 165 AILGQQVYGWQFVASDINPQSLA----NVQ-----------RIIDN-------------- 195
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
N + GH+ + ++ F G++ ++F+ +CNPP
Sbjct: 196 ------NSCLQGHVTLRRQRDENAIFK----------------GIIEAADRFELTLCNPP 233
Query: 251 FFESMEEA---------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDS 290
F S+ EA G PK + GG E+ C GGE+ F+ +I +S
Sbjct: 234 FHASLREASEGSQRKVRNLQLSRGEKPKATGASLNFGGQAAELWCQGGEKQFLATMIRES 293
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ W+TS+V ++ NLK L K+GV VKT E QG LAWSF A++
Sbjct: 294 HMFAEQCLWFTSLVSKQENLKPCYQALAKLGVDTVKTIEMQQGNKVTRVLAWSFHSQAKR 353
Query: 351 I 351
+
Sbjct: 354 L 354
>gi|374600851|ref|ZP_09673853.1| 23S rRNA m(6)A-1618 methyltransferase [Myroides odoratus DSM 2801]
gi|423325539|ref|ZP_17303379.1| hypothetical protein HMPREF9716_02736 [Myroides odoratimimus CIP
103059]
gi|373912321|gb|EHQ44170.1| 23S rRNA m(6)A-1618 methyltransferase [Myroides odoratus DSM 2801]
gi|404606225|gb|EKB05785.1| hypothetical protein HMPREF9716_02736 [Myroides odoratimimus CIP
103059]
Length = 302
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 162/354 (45%), Gaps = 75/354 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
++ + +H +NK+ ++ DF L + P E F+ + GR ID+ A L + +L
Sbjct: 5 KKVQKKLHERNKH-QHGYDFNQLKLVVPELEAFIIKNPSGRDTIDFALPEAVVLLNKAIL 63
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+HD+ + +W +P LCP +P R++YIH+I DL++ + +PT G VK D+G G
Sbjct: 64 MHDYKITFWEMPKTNLCPPIPGRADYIHYIADLMAEDNGGKVPT----GGGVKVLDLGIG 119
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
AN IYP++G + GW FVGS++ V+++ A V +NPH+ + IR
Sbjct: 120 ANVIYPIIGVAEYGWEFVGSEVDVVSIQTASHIVDNNPHLKNKVTIR------------- 166
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
Q +S ++ L ++ + E FD
Sbjct: 167 -------QQKSKRNI-------------------------------LKNIIGEKEYFDVV 188
Query: 246 ICNPPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
ICNPPFF S E P + G E+ C GGE+AFIT I +S
Sbjct: 189 ICNPPFFSSRAEVLAKTTQKLRNLGKEVIGKPVQNFSGQNNELWCEGGEKAFITNYIYES 248
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
K+ W+T++V K NLK L + L++ V V+ QG LAW +
Sbjct: 249 KHFKRQAVWFTTLVSNKDNLKPLQALLKRSEVAEVRVIHMEQGNKISRILAWKY 302
>gi|395648693|ref|ZP_10436543.1| 23S rRNA mA1618 methyltransferase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 340
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 162/351 (46%), Gaps = 78/351 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N++ + DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRH-QGRYDFPALIKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKAFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIY 130
+ W IP LCP VP R++Y+H++ DLL+S IP G VK DIG GANC+Y
Sbjct: 89 IQHWDIPADYLCPPVPGRADYVHFLADLLASVNGGEIP----RGAPVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAVAAAKAIVQSN-GLNKAIQLRQQTNPKH----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+G++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLGLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA +PK GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + L+K GV + E QGQ +AW+F
Sbjct: 273 AHKVLWFSTLVSKASNLPAIEIALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|333926325|ref|YP_004499904.1| ribosomal RNA large subunit methyltransferase F [Serratia sp. AS12]
gi|333931278|ref|YP_004504856.1| ribosomal RNA large subunit methyltransferase F [Serratia
plymuthica AS9]
gi|386328148|ref|YP_006024318.1| Ribosomal RNA large subunit methyltransferase F [Serratia sp. AS13]
gi|333472885|gb|AEF44595.1| Ribosomal RNA large subunit methyltransferase F [Serratia
plymuthica AS9]
gi|333490385|gb|AEF49547.1| Ribosomal RNA large subunit methyltransferase F [Serratia sp. AS12]
gi|333960481|gb|AEG27254.1| Ribosomal RNA large subunit methyltransferase F [Serratia sp. AS13]
Length = 321
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 167/358 (46%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ EPFV + G +D+ D A +
Sbjct: 2 EKKKTFPQQKSGLHPRNRHRSRY-DFPALIASCPALEPFVKPNAWGDISVDFADPAAVKM 60
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 61 LNRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKGVAILDV 119
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+L A+ V+ NP + + +R
Sbjct: 120 GIGANCIYPIVGLREYGWRFTGSEIDPVSLNSAKMIVEMNPTLRNSVRLR---------- 169
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + ++G ++GV E+F
Sbjct: 170 ---------LQKQPEFILNG-----------------------------IIGV---AEKF 188
Query: 243 DFCICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA P + GG E+ C GGE AF+ ++
Sbjct: 189 DATLCNPPFHGSEQEARASTRLKLHKLGKGEVADKPIQNFGGKNNELWCEGGEEAFVRKM 248
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+E+SV Q W+TS++ + + L + L+ G V+T E QGQ +AW+F
Sbjct: 249 VEESVGKAQNCLWFTSLISKNTTLPSIYHALKLAGAVEVRTIEMAQGQKISRFVAWTF 306
>gi|157369713|ref|YP_001477702.1| putative SAM-dependent methyltransferase [Serratia proteamaculans
568]
gi|205829607|sp|A8GBT4.1|RLMF_SERP5 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|157321477|gb|ABV40574.1| protein of unknown function DUF890 [Serratia proteamaculans 568]
Length = 336
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 165/358 (46%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ EPFV + G +D+ D A +
Sbjct: 17 EKKKSFPQQKSGLHPRNRHRSRY-DFPALIASCPALEPFVKPNAWGDISVDFADPAAVKM 75
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 76 LNRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATSNDGEIPR-GKGVAILDV 134
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+L A+ V+ NP + + +R E
Sbjct: 135 GIGANCIYPIVGLREYGWRFTGSEIDPVSLNSAKMIVEMNPTLRNSVRLRLQKQPEFI-- 192
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
FN G++ E+F
Sbjct: 193 ---------------------------------FN----------------GIIGVAEKF 203
Query: 243 DFCICNPPFFESMEEAGLN----------------PKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA + P + GG E+ C GGE AF+ ++
Sbjct: 204 DATLCNPPFHGSEQEAQASTRRKLHKLGKGEVADKPVQNFGGKNNELWCEGGEEAFVRKM 263
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+E+SV+ Q W+TS++ + + L + + GV V+T E QGQ +AW+F
Sbjct: 264 VEESVSKAQNCLWFTSLISKHTTLPSIYHAAKLAGVAEVRTIEMAQGQKISRFVAWTF 321
>gi|421505237|ref|ZP_15952176.1| 23S rRNA mA1618 methyltransferase [Pseudomonas mendocina DLHK]
gi|400344063|gb|EJO92434.1| 23S rRNA mA1618 methyltransferase [Pseudomonas mendocina DLHK]
Length = 333
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 71/347 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L P FV + G+P ID+ + A + R LL +G+
Sbjct: 25 LHPRNRH-QGRYDFPALIKASPELGDFVITNPYGKPSIDFANPAAVKVFNRALLAQYYGI 83
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IPDG LCP +P R++Y+H + DLL+++ R G ++ DIG GANCIYPL+G
Sbjct: 84 RHWDIPDGYLCPPIPGRADYLHNLADLLATDNDGQMPR-GAGIRALDIGVGANCIYPLIG 142
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW F+G+D+ AL A V +NP ++ IE+R+ N+E
Sbjct: 143 HCEYGWHFIGADIAPAALASARAIVAANPQLAGGIELRQQANAEQ--------------- 187
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ +G+++ E+ D +CNPPF S
Sbjct: 188 ------------------------------------IFLGLLQADERVDLTLCNPPFHAS 211
Query: 255 MEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
+EA L+P+ GG E+ C GGE AF+ R+ +S +
Sbjct: 212 ADEATRGSTRKWRNLGKLDPRRKLPVLNFGGQAAELWCPGGEAAFLKRMASESAQVAGQV 271
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++S+V + SN++ L L K G V+ QGQ +AW+F
Sbjct: 272 LWFSSLVSKGSNVELLQGWLAKAGAAEVRILGMSQGQKQSRLVAWTF 318
>gi|378698762|ref|YP_005180719.1| hypothetical protein SL1344_0801 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|379700033|ref|YP_005241761.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|301157410|emb|CBW16899.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|323129132|gb|ADX16562.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
Length = 310
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 161/350 (46%), Gaps = 72/350 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANC 128
+ + W IP G LCP VP R++YIH + DLL ++ IP + + +G GANC
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGETTGSIPAQA----TILDVGVGVGANC 118
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 IYPLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR--------------- 163
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +P++ + G++ E +D +CN
Sbjct: 164 ------------------QKDPAA------------------IFTGIIHKNEFYDATLCN 187
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 PPFHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRR 247
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 QVLWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 297
>gi|238784076|ref|ZP_04628091.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
bercovieri ATCC 43970]
gi|238715053|gb|EEQ07050.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
bercovieri ATCC 43970]
Length = 324
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 161/362 (44%), Gaps = 76/362 (20%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G +D+ D A + L R LL
Sbjct: 9 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPNAYGDISVDFADPLAVKMLNRALLK 67
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++YIH + DLL+S +IP G + DIG GA
Sbjct: 68 HFYGIEYWDIPADFLCPPIPGRADYIHHLADLLASCNDGVIPA----GKNIALLDIGVGA 123
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + ++ + ++
Sbjct: 124 NCIYPIIGQREYGWRFTGTDIDPQALSAAKMVVSMNPTLRNTLRLKHQKDPQA------- 176
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ GV+ E++D +
Sbjct: 177 --------------------------------------------IFEGVLAANERYDATL 192
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 193 CNPPFHGSAEEAAATTRRKLHKLGKGEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVVES 252
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
++ W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P +
Sbjct: 253 ATKAKSCFWFTSLISKKTTLPAIYHALRYANAVEVRTIDMAQGQKVSRFVAWTFLTPEEQ 312
Query: 351 II 352
+
Sbjct: 313 AV 314
>gi|148651824|ref|YP_001278917.1| putative SAM-dependent methyltransferase [Psychrobacter sp. PRwf-1]
gi|205829574|sp|A5WBC6.1|RLMF_PSYWF RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|148570908|gb|ABQ92967.1| 23S rRNA m(6)A-1618 methyltransferase [Psychrobacter sp. PRwf-1]
Length = 327
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 158/359 (44%), Gaps = 84/359 (23%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N + + DF L P E + G I+++D +A L + LL H +
Sbjct: 23 TLHPRNPH-QGRYDFDKLIKALPELEKHAITNPSGEATINFSDADAVLTLNKALLAHHYN 81
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ +W +P G LCP +P R++YIH + DLL++N + K DIGTGA+ IYP++
Sbjct: 82 IKYWDLPKGYLCPPIPGRADYIHQVADLLNNN---NSGSENKKPHVLDIGTGASLIYPII 138
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G+ GW F +D+ V++ A+ + NP++ +L+ +++ N ++
Sbjct: 139 GSQSYGWYFTATDIDPVSINTAKAICEINPNLKKLVTVKQQKNPKN-------------- 184
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+ G++ + + FD +CNPPF
Sbjct: 185 -------------------------------------IFKGIIGEHDYFDITVCNPPFHG 207
Query: 254 SMEE----------------AGLNPKTSC------------GGTPEEMVCSGGERAFITR 285
SM++ A NP GG E+ GGE +FI+R
Sbjct: 208 SMQDVLDANNRKQSKLQKNRARRNPNGQANKFADAKNNLNFGGQNAELWTEGGEFSFISR 267
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I +SV Q W+T++V R NLK L + LRKVG +KT GQ LAW F
Sbjct: 268 MINESVGYAQQVNWFTTLVSRAENLKPLDALLRKVGARQIKTINMQHGQKASRILAWRF 326
>gi|315123308|ref|YP_004065314.1| putative SAM-dependent methyltransferase [Pseudoalteromonas sp.
SM9913]
gi|315017068|gb|ADT70405.1| putative SAM-dependent methyltransferase [Pseudoalteromonas sp.
SM9913]
Length = 310
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 162/354 (45%), Gaps = 76/354 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N++ +N DF LL S PS F+ + G ID+++ A + L +
Sbjct: 2 KAKSTRSKLHPRNQH-KNGYDFNLLTSQTPSLTAFLITTPAGNQSIDFSNNLAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +N+W IP LCP +P R +YIH++ DLLS + +IPT G ++K DIG
Sbjct: 61 LLKSHYNINFWDIPKHNLCPPIPGRVDYIHYLADLLSEDNQQVIPT----GRQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN +YPL G S W F GSD+ A++ A++ + N
Sbjct: 117 TGANLVYPLTGNSEYQWHFTGSDIDLAAIKIAKQLAQFN--------------------- 155
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
D+ + ++ P + GVV + +
Sbjct: 156 ---------------DLKITLKQQKNPEH------------------IFKGVVNAKDLYH 182
Query: 244 FCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDS 290
+CNPPF S EEA G P + GG E+ C GGE FI+ +I++S
Sbjct: 183 LTMCNPPFHASAEEANKGSERKWKNLGKAPSNALNFGGQSNELWCEGGELTFISNMIKES 242
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V +K L L ++L+++ + K E QGQ +AWS+
Sbjct: 243 AQFSEQVIWFTSLVSKKETLAALQTQLKQLPICDYKIVEMAQGQKVSRFIAWSY 296
>gi|146308550|ref|YP_001189015.1| putative SAM-dependent methyltransferase [Pseudomonas mendocina
ymp]
gi|205829566|sp|A4XY67.1|RLMF_PSEMY RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|145576751|gb|ABP86283.1| 23S rRNA m(6)A-1618 methyltransferase [Pseudomonas mendocina ymp]
Length = 333
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 71/347 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L + P FV + G+P ID+ + A + R LL +G+
Sbjct: 25 LHPRNRH-QGRYDFPALIKVSPELGDFVITNPYGKPSIDFANPAAVKVFNRALLAQYYGI 83
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IPDG LCP +P R++Y+H + DLL+++ R G + DIG GANCIYPL+G
Sbjct: 84 RHWDIPDGYLCPPIPGRADYLHNLADLLATDNDGQIPR-GAGIHALDIGVGANCIYPLIG 142
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW F+G+D+ AL A V +NP ++ IE+R+ N+E
Sbjct: 143 HCEYGWHFIGADIAPAALASARAIVAANPQLAGGIELRQQANAEQ--------------- 187
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ +G+++ E+ D +CNPPF S
Sbjct: 188 ------------------------------------IFLGLLQADERVDLTLCNPPFHAS 211
Query: 255 MEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
+EA L+P+ GG E+ C GGE AF+ R+ +S +
Sbjct: 212 ADEATRGSTRKWRNLGKLDPRRKLPVLNFGGQAAELWCPGGEAAFLKRMASESAQVAGQV 271
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++S+V + SN++ L L K G V+ QGQ +AW+F
Sbjct: 272 LWFSSLVSKGSNVELLQGWLAKAGAAEVRILGMSQGQKQSRLVAWTF 318
>gi|325093401|gb|EGC46711.1| DUF890 domain-containing protein [Ajellomyces capsulatus H88]
Length = 445
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 165/350 (47%), Gaps = 90/350 (25%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DFA+LA YP+F A +ELT+ LL D GL+ +P +LCP
Sbjct: 13 DFAVLALQYPNF--------------------AKQELTKSLLKRDFGLHLDLPSDRLCPP 52
Query: 88 VPNRSNYIHWIEDLL---SSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG-ASLLGWSFV 143
VPNR NYI W++DLL S+N + D + G DIGTGA+CIYPLLG A W F
Sbjct: 53 VPNRFNYILWLQDLLDSTSANYSDGYDQERD-IFGLDIGTGASCIYPLLGCAQRPKWRFA 111
Query: 144 GSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGH 203
+D+ L++A NV+ N S + I
Sbjct: 112 ATDIDAKNLKYARDNVQRNKLDSRIQIIE------------------------------- 140
Query: 204 MDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE------ 257
SS+S+ +P A + + + DF +CNPPF++S +E
Sbjct: 141 -------SSTSNALIPLEA----------INIPESNSRLDFTMCNPPFYQSRDELISSAK 183
Query: 258 -AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISK 316
P ++C G EM+ GGE F+TR+I +S+ L+ +WYTSMVG+ S++ L++
Sbjct: 184 AKQRPPFSACTGAEVEMITPGGEVEFVTRMIRESIELRNRVQWYTSMVGKFSSVATLLNI 243
Query: 317 LRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP---------PARKIISPHV 356
LRK G EFVQG +T RW + WS++ P R+ I+ H+
Sbjct: 244 LRKEGNENWAVAEFVQGSKTRRWAIGWSWMDYRPGTGPSRPHRQSIAKHL 293
>gi|195486194|ref|XP_002091401.1| GE13632 [Drosophila yakuba]
gi|194177502|gb|EDW91113.1| GE13632 [Drosophila yakuba]
Length = 305
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 163/350 (46%), Gaps = 69/350 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N PD+ LA Y F +G+ +++ + RELT++LL + L
Sbjct: 13 MHPRN-VLRTQPDYTKLAIKYKDFREQCQLELNGKVSVNFRNEKTLRELTKMLLKEYYDL 71
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ G L PT+ R NYI W+EDL+ N ++G DIG G++CIY LLGA
Sbjct: 72 DVDFAPGSLVPTLALRLNYILWLEDLMEP-------LNLQDIRGIDIGCGSSCIYSLLGA 124
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW + + +E+A +NVK N H+ L+E+
Sbjct: 125 KKNGWHMLALESKLQNIEYAIENVKKN-HLESLVEVY----------------------- 160
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
A+P ++ F SY + Q+ FC+CNPPFF+S
Sbjct: 161 ------------AQPDKTNIF-------KSYFEQD------QQKLQYQFCLCNPPFFDSN 195
Query: 256 -----------EEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
E P + G+ EE+ C GGE F+ RII++S+ K+ R +T+M+
Sbjct: 196 LPNPFGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDESLENKERVRIFTTML 255
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF-VPPARKIIS 353
G K+N+ ++ L+K+ V V TTEF QG T RW +AWSF P R+ S
Sbjct: 256 GVKANVPRILDYLQKLQVANVTTTEFHQGHTTRWAVAWSFHAEPLRQATS 305
>gi|417951471|ref|ZP_12594571.1| 23S rRNA mA1618 methyltransferase [Vibrio splendidus ATCC 33789]
gi|342804681|gb|EGU39985.1| 23S rRNA mA1618 methyltransferase [Vibrio splendidus ATCC 33789]
Length = 414
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 165/376 (43%), Gaps = 85/376 (22%)
Query: 2 GSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNAT 61
GS++ + + +HP+N+++ DF LL + P + + + G I+++D A
Sbjct: 80 GSQRNKNTVKPAAGLHPRNQHTGRY-DFKLLVAALPELKVHLIKNPVGEDTINFSDPLAV 138
Query: 62 RELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
+ L + LL H +G+ W IP G LCP +P R++YIH + D+L+S+ N VK
Sbjct: 139 KLLNKALLAHHYGVKHWDIPAGYLCPPIPGRADYIHRVADILNSDG-QGEPYNHQSVKAL 197
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIG GANCIYP++GA+ W GSD+ V+++ A SN ++ I+ R +SES
Sbjct: 198 DIGVGANCIYPIIGATEYKWRCTGSDVDPVSVKAANFIAASNVNLKGKIKARLQADSES- 256
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
+ GV++D E
Sbjct: 257 --------------------------------------------------IFKGVIKDNE 266
Query: 241 QFDFCICNPPFFESMEEAGL-------------------------------NPKTSCGGT 269
+D ICNPPF S+EEA P + GG
Sbjct: 267 CYDVTICNPPFHSSLEEAEKGTQRKLDNLAANRAKKAGQTFKPEAKKAKQNKPTLNFGGQ 326
Query: 270 PEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTE 329
E+ C GGE AFI ++ +S W+T+++ +K N+ L S+L K+ VK E
Sbjct: 327 KAELWCPGGEAAFIMKMARESQLFATQVLWFTTLISKKDNVDMLRSELGKLKAKQVKVVE 386
Query: 330 FVQGQTCRWGLAWSFV 345
QGQ +AW+F+
Sbjct: 387 MSQGQKVSRFVAWTFM 402
>gi|157146555|ref|YP_001453874.1| putative SAM-dependent methyltransferase [Citrobacter koseri ATCC
BAA-895]
gi|205829576|sp|A8AIX5.1|RLMF_CITK8 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|157083760|gb|ABV13438.1| hypothetical protein CKO_02316 [Citrobacter koseri ATCC BAA-895]
Length = 308
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 155/348 (44%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL +
Sbjct: 4 QKPGLHPRNRHHHRY-DLATLCQVTPELAQFLTRTPAGEQSVDFANPLAVKALNKALLAY 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + NW IP+G LCP VP R++YIH + DLL TT D+GTGANCIY
Sbjct: 63 FYQVANWDIPEGFLCPPVPGRADYIHHLADLLGE----TTGAIPADASVLDVGTGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS++ AL A+ + NP ++ I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVHAQALASAQVIISGNPGLTRSIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ EQ+D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFNGIIHKNEQYDATLCNPP 187
Query: 251 FFESMEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A N + GG +E+ C GGE AFI +I +S A +
Sbjct: 188 FHDSAASARAGSERKRRNLGQDKNDALNFGGQQQELWCEGGEVAFIKTMIAESQAFGRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L VG V E QGQ +AW+F+
Sbjct: 248 MWFTTLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|146310952|ref|YP_001176026.1| SAM-dependent methyltransferase [Enterobacter sp. 638]
gi|205829556|sp|A4W8E5.1|RLMF_ENT38 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|145317828|gb|ABP59975.1| 23S rRNA m(6)A-1618 methyltransferase [Enterobacter sp. 638]
Length = 305
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 156/353 (44%), Gaps = 69/353 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+P +HP+N++ D L P + F+ + G P +++ D A + L + LL H
Sbjct: 4 EKPGLHPRNRHRSRY-DMNALCQSCPQLQAFIVQTPAGEPSVNFADPLAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ W IP+G LCP VP R++Y+H + DLL+ + T + DIGTGAN IY
Sbjct: 63 FYGVTQWDIPEGFLCPPVPGRADYVHHLADLLAEDNAGTIP---PQATVLDIGTGANLIY 119
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G + GW F GS+ A A+ V N ++ I +R+
Sbjct: 120 PLIGVAEYGWRFTGSETGKDAYASAQAIVNGNEGLTRAIRLRR----------------- 162
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +S FN G++ E +D +CNPP
Sbjct: 163 ------------------QKEASDIFN----------------GIIHKNESYDATMCNPP 188
Query: 251 FFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S E A + + GG E+ C GGE AFI ++I +S +
Sbjct: 189 FHDSAETARAGSERKRRNLGQAEDGALNFGGQQHELWCEGGEVAFIEKMIAESKLFARQV 248
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+W+T++V R NL L L VG V E QGQ +AW+F+ A++
Sbjct: 249 KWFTTLVSRGDNLPPLYRALTAVGAVKVVKKEMAQGQKQSRFIAWTFMDDAKR 301
>gi|336313589|ref|ZP_08568529.1| ribosomal RNA large subunit methyltransferase F [Shewanella sp.
HN-41]
gi|335862927|gb|EGM68108.1| ribosomal RNA large subunit methyltransferase F [Shewanella sp.
HN-41]
Length = 348
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 161/365 (44%), Gaps = 79/365 (21%)
Query: 10 REERP---TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
R ++P +HP+N + N DF L S +P + FV + G ID+ D A + L
Sbjct: 27 RGDKPLQKALHPRNIHL-NGYDFLALTSAFPQLKTFVRPTPYGALSIDFADPLAVKTLNA 85
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG 125
LL H +G+ W IP G LCP +P R +Y+H++ DLL S D + DIGTG
Sbjct: 86 ALLKHHYGIGSWDIPKGALCPPIPGRVDYLHYLADLLVEG---DKSWALDNARVLDIGTG 142
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
AN IYP+LG+ + GW FV SD+ N+ S ++Q
Sbjct: 143 ANGIYPILGSQVYGWQFVASDI----------------------------NAHSLANVQG 174
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+ E N + G + +P+ + F G++ ++F+
Sbjct: 175 II-------ERNPVLQGRLSLRLQPNEKAVFK----------------GIIEADDRFELT 211
Query: 246 ICNPPFFESMEEAG--------------------LNPKTSCGGTPEEMVCSGGERAFITR 285
+CNPPF S+ EA + K + GG E+ C GGE+ F+
Sbjct: 212 LCNPPFHASLAEASEGSLRKVRNLAANRGGKAQLASAKLNFGGQAAELWCQGGEQQFLAT 271
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+I +S + W+TS+V +K NLK L K+ V VKT E QG LAWSF
Sbjct: 272 MIRESQGFAEQCMWFTSLVSKKENLKPCYQALTKLRVDTVKTIEMQQGNKITRVLAWSFH 331
Query: 346 PPARK 350
A++
Sbjct: 332 SQAKR 336
>gi|332161052|ref|YP_004297629.1| putative SAM-dependent methyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|386309198|ref|YP_006005254.1| ribosomal RNA large subunit methyltransferase F [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418240773|ref|ZP_12867309.1| 23S rRNA mA1618 methyltransferase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550276|ref|ZP_20506320.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
enterocolitica IP 10393]
gi|318604928|emb|CBY26426.1| ribosomal RNA large subunit methyltransferase F [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665282|gb|ADZ41926.1| putative SAM-dependent methyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|351779776|gb|EHB21873.1| 23S rRNA mA1618 methyltransferase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431789411|emb|CCO69360.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
enterocolitica IP 10393]
Length = 335
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 159/360 (44%), Gaps = 76/360 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISIDFASPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G V DIG GA
Sbjct: 83 HFYGIEYWDIPADFLCPPIPGRADYVHHLADLLASCNDGVIP----QGKNVAVLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + +++ N +
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDPQALSAAKMVVSMNPTLKNTLRLKQQKNPQV------- 191
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ E++D +
Sbjct: 192 --------------------------------------------IFDGILAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKSEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P ++
Sbjct: 268 ATKAQNCFWFTSLISKKTTLPAIYHALRYANAVEVRTVDMAQGQKVSRFVAWTFLTPEQQ 327
>gi|168236757|ref|ZP_02661815.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194736599|ref|YP_002113917.1| SAM-dependent methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|204929795|ref|ZP_03220816.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|416570315|ref|ZP_11765976.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|418510922|ref|ZP_13077192.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|452120968|ref|YP_007471216.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|254807096|sp|B4TQW9.1|RLMF_SALSV RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|194712101|gb|ACF91322.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197290161|gb|EDY29518.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|204320789|gb|EDZ05990.1| putative methyltransferase YbiN [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|363575599|gb|EHL59449.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|366085171|gb|EHN49061.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|451909972|gb|AGF81778.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 308
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 158/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKSGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|195334547|ref|XP_002033939.1| GM21591 [Drosophila sechellia]
gi|194125909|gb|EDW47952.1| GM21591 [Drosophila sechellia]
Length = 307
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 70/341 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N P D+ +A Y F +G+ +++ + RELT++LL + L
Sbjct: 13 MHPRNVLRTQP-DYTKMAIKYKDFREQCQLELNGKVSVNFRNEKTLRELTKMLLKEYYDL 71
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ G L PT+ R NYI W+EDL+ + ++G DIG G++CIY LLGA
Sbjct: 72 DVDFAPGSLVPTLALRLNYILWLEDLMEPLSLQV-------IRGIDIGCGSSCIYSLLGA 124
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR-KVDNSESTPSIQESLTGKSVQD 194
GW + + +E+A KNVK N H+ LIE+ + DN+ S E QD
Sbjct: 125 KKNGWHMLALESKPQNIEYAMKNVKKN-HLESLIEVYAQPDNTNIFKSYFE-------QD 176
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ + Q+ FC+CNPPFF+S
Sbjct: 177 QRQL------------------------------------------QYQFCLCNPPFFDS 194
Query: 255 MEEAGLN-----------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303
L P + G+ EE+ C GGE F+ RII++S+ K+ R YT+M
Sbjct: 195 NLPNPLGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDESLENKERVRIYTTM 254
Query: 304 VGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+G K+N+ ++ L++ V V TTEF QG T RW +AWSF
Sbjct: 255 LGVKANVPRILDYLKEQQVANVSTTEFHQGHTTRWAVAWSF 295
>gi|91774521|ref|YP_544277.1| SAM-dependent methyltransferase [Methylobacillus flagellatus KT]
gi|123380658|sp|Q1H501.1|RLMF_METFK RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|91708508|gb|ABE48436.1| 23S rRNA m(6)A-1618 methyltransferase [Methylobacillus flagellatus
KT]
Length = 336
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 164/365 (44%), Gaps = 84/365 (23%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ + DFALL +P FV ++ ID+ D A + L + LL
Sbjct: 8 DEKSGLHPRNRHRQRY-DFALLVEAHPPLAAFVRLNQYEDASIDFADAQAVKTLNQALLK 66
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCI 129
+G+ W IP LCP +P R++Y+H + DLL++ G+ V+ DIGTGAN +
Sbjct: 67 CYYGIAAWDIPPQFLCPPIPGRADYVHCLADLLAAGNDGNMPYGGN-VRVLDIGTGANLV 125
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
YP++G GW FVG+D+ ALE A+ V +NP ++ IE+R N +
Sbjct: 126 YPIIGQKEYGWHFVGTDINVEALENAQGIVAANPGLAGAIELRLQRNVGA---------- 175
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
V GVV++ E+FD +CNP
Sbjct: 176 -----------------------------------------VFSGVVQESERFDLTMCNP 194
Query: 250 PFFES--------------MEEAGLNP----------------KTSCGGTPEEMVCSGGE 279
PF S +E + P + + GG E+ C GGE
Sbjct: 195 PFHASQAAAMAGTERKWHHLERSRGKPTGKGVRRVRSGRMSGNRLNFGGQAAELYCEGGE 254
Query: 280 RAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWG 339
FI+R+I++S A+ W+T++V + + L + LR V VKT + QGQ
Sbjct: 255 EGFISRMIKESAAVGAQCLWFTTLVSKAATLPAVYRSLRAVDAYKVKTIDMAQGQKKSRF 314
Query: 340 LAWSF 344
+AW+F
Sbjct: 315 VAWTF 319
>gi|423212833|ref|ZP_17199362.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
xylanisolvens CL03T12C04]
gi|392694691|gb|EIY87918.1| ribosomal RNA large subunit methyltransferase F [Bacteroides
xylanisolvens CL03T12C04]
Length = 311
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 165/357 (46%), Gaps = 76/357 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +H +NK++ DF LL YP + FV + G I++ + A + L + LL+
Sbjct: 3 QKGELHIRNKHN-GQYDFPLLIENYPPLKRFVSLNPLGVQTINFFNPQAVKALNKALLIS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS----SNIIPTTSRNGD----KVKGFDI 122
+G+ +W IP LCP +P R++YIH+I DL+ +N + T + + K + D+
Sbjct: 62 YYGIRYWDIPKQYLCPPIPGRADYIHYIADLIQPDRVANDLQTEEEDANEQKTKCRCLDV 121
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G + GW+FVGSD+ V++E A K V NP ++ I++R +S
Sbjct: 122 GVGANCIYPIIGHTEYGWTFVGSDIDPVSIENARKIVTCNPVLAHKIDLRLQKDSRK--- 178
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ G++ E F
Sbjct: 179 ------------------------------------------------IFDGIIMPDEYF 190
Query: 243 DFCICNPPFFESMEEA--GLNPKTSC-------------GGTPEEMVCSGGERAFITRII 287
D ICNPPF S EEA G K S GG+ E+ C GGE FI +I
Sbjct: 191 DVTICNPPFHSSKEEAEDGTLRKLSSLKGTKVKKVQLNFGGSANELWCEGGEIRFILNMI 250
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S ++ W+TS+V ++ NL+ L +KL+ V V+ K QG LAW F
Sbjct: 251 SESQKYQKNCGWFTSLVSKEKNLEKLCAKLKSVNVSEYKIIRMQQGTKSSRILAWRF 307
>gi|296103263|ref|YP_003613409.1| putative SAM-dependent methyltransferase [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295057722|gb|ADF62460.1| putative SAM-dependent methyltransferase [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 302
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 158/354 (44%), Gaps = 83/354 (23%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P +HP+N++ D L P + ++ + G P +++ D A + L + LL H
Sbjct: 4 KPGLHPRNRHRSRY-DMKALCQSCPPLQDYIVQTPAGEPSVNFADPQAVKMLNKALLAHF 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANC 128
+G+ W IP+G LCP VP R++Y+H++ DLL+ + +IP + DIGTGAN
Sbjct: 63 YGVTHWDIPEGFLCPPVPGRADYLHYLADLLADDRGGVIP------QQATVLDIGTGANL 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G W F GS++ A A+ + +NP +S I +R+
Sbjct: 117 IYPLIGVHEYHWRFTGSEIGAEAFASAQAIINANPGLSRSIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ ++S FN G++ E +D +CN
Sbjct: 162 --------------------QKDAASIFN----------------GIIHKNEHYDATLCN 185
Query: 249 PPFFES-----------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
PPF +S E+ LN GG +E+ C GGE AFI R+I +S
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGQAEDGALN----FGGQQQELWCEGGEVAFILRMIAESK 241
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ +W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 242 QFARQVKWFTTLVSRGDNLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|303315303|ref|XP_003067659.1| hypothetical protein CPC735_066140 [Coccidioides posadasii C735
delta SOWgp]
gi|240107329|gb|EER25514.1| hypothetical protein CPC735_066140 [Coccidioides posadasii C735
delta SOWgp]
Length = 442
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 177/369 (47%), Gaps = 86/369 (23%)
Query: 18 PKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNW 77
P+N Y ++ DF LA P F F+ + ++D+ D A R+LT+ LL D LN
Sbjct: 4 PRNIYRQDV-DFRSLALEDPDFAKFLKVN----GQLDFNDPGAVRQLTKSLLRRDFKLNV 58
Query: 78 WIPDGQLCPTV----------PNRSNYIHWIEDLLSSNIIPTTSRNG----DKVKGFDIG 123
+ D +LCP V R NY+ W++DL+ + R G +V G DIG
Sbjct: 59 ELSDDRLCPPVRIYASYLSKMSPRFNYVLWLQDLIDTT--NDDYRGGYDPEREVVGLDIG 116
Query: 124 TGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
TGA+CIYPLL A W FV +D+ D ++A++NVK N S IR V
Sbjct: 117 TGASCIYPLLACAQRPKWMFVATDINDKNFQYAQENVKRNNLQSR---IRVV-------- 165
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+++ P + +G E+
Sbjct: 166 ----------------------------------------KTTAEDPLIALGDKVPFERL 185
Query: 243 DFCICNPPFFESMEE----AGLN---PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
F +CNPPF+ES EE A L P ++C G P EMV +GGE +F+ RII++S+ L+
Sbjct: 186 QFTMCNPPFYESEEEMLASANLKHRPPNSACTGAPVEMVTAGGEESFVQRIIDESLKLRN 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIISP 354
+WYTSM+G+ S++ LI KL + G TEFVQG +T RW +AWS+ + + P
Sbjct: 246 KVQWYTSMLGKLSSVTKLIEKLLESGNQNWAVTEFVQGSKTRRWAIAWSW-----RDLRP 300
Query: 355 HVAEKKNLS 363
+ +N+S
Sbjct: 301 TMGVARNIS 309
>gi|398864191|ref|ZP_10619729.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM78]
gi|398245560|gb|EJN31076.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM78]
Length = 343
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 168/361 (46%), Gaps = 78/361 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ ++HP+N++ + DF L P FV + G+ ID+ +A R R LL
Sbjct: 26 REKASLHPRNRH-QGRYDFPALIKTTPELAKFVIINPYGKESIDFASPDAVRVFNRALLK 84
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
+G+ W IP LCP VP R++Y+H++ DLL+S +IP G VK DIG GA
Sbjct: 85 SFYGIAHWDIPADYLCPPVPGRADYVHFLADLLASANEGVIP----RGAAVKVLDIGMGA 140
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NC+YPL+G S W F+GS++ A+ A+ +++N +++ I+IR+ N
Sbjct: 141 NCVYPLIGHSDYRWQFLGSEIDSTAIAAAKAIIQAN-GLNKAIQIRQQSNPRQ------- 192
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L+G++ E+FD +
Sbjct: 193 --------------------------------------------ILLGLLESAERFDLTM 208
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG E+ C GGE F+T++I +
Sbjct: 209 CNPPFHASLDEATRGSTRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEARFVTQLISE 268
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
S + Q W++++V + SNL + + L+K G + E QGQ +AW+F PA+
Sbjct: 269 SAQVGQQVLWFSTLVSKASNLPAIQTALKKAGALQSQVVEMSQGQKQSRFVAWTFQTPAQ 328
Query: 350 K 350
+
Sbjct: 329 Q 329
>gi|422791583|ref|ZP_16844286.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TA007]
gi|323971972|gb|EGB67193.1| ribosomal RNA large subunit methyltransferase F [Escherichia coli
TA007]
Length = 316
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 153/335 (45%), Gaps = 75/335 (22%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + SNP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAK 245
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVG-VTIVKTTE 329
W+TS+V R NL L L VG V +VK +
Sbjct: 246 QVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKRD 280
>gi|392978235|ref|YP_006476823.1| 23S rRNA mA1618 methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392324168|gb|AFM59121.1| 23S rRNA mA1618 methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 303
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 161/355 (45%), Gaps = 83/355 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
+P +HP+N++ D L P + ++ + G P +++ D A + L + LL H
Sbjct: 4 HKPGLHPRNRHRSRY-DMNALCQSCPPLQDYIVQTPAGEPSVNFADPQAVKMLNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP+G LCP VP R++Y+H++ DLL+ + +IP + DIGTGAN
Sbjct: 63 FYGVAHWDIPEGFLCPPVPGRADYLHYLADLLADDRDGLIP------QQATVLDIGTGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPL+G W F GS++ A A+ + +NP +S I +R+ Q+ +
Sbjct: 117 LIYPLIGVHEYHWRFTGSEIGAEAFASAQAIINANPGLSRSIRLRR----------QKEV 166
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
T S FN G++ E +D +C
Sbjct: 167 T-------------------------SIFN----------------GIIHKNESYDATMC 185
Query: 248 NPPFFES-----------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF +S E+A LN GG +E+ C GGE AFI R+I +S
Sbjct: 186 NPPFHDSAAAARAGSERKRRNLGQAEDAALN----FGGQQQELWCEGGEVAFILRMIAES 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ +W+T++V R NL L L + G V E QGQ +AWSF+
Sbjct: 242 KQFARQVKWFTTLVSRGDNLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWSFM 296
>gi|152986549|ref|YP_001346658.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
PA7]
gi|150961707|gb|ABR83732.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 339
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 165/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + G+P ID+ D A + R LL
Sbjct: 18 RKSASPLHPRNRHLGRY-DFPGLIAGNPELERFVIVNPYGKPSIDFADPLAVKAFNRALL 76
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IP+G LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 77 QQFYDVREWNIPEGYLCPPIPGRADYLHYLADLLGASHDGVIP----RGTGLRALDVGTG 132
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+
Sbjct: 133 ANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANPRFAAAIELRR------------ 180
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+P F G+V E+FD
Sbjct: 181 -----------------------QPDRRHIFE----------------GLVDSAERFDMT 201
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ +
Sbjct: 202 LCNPPFHASLDEATRGSRRKWKNLGKLDPGRTLPLLNFGGQGAELHCEGGEAAFLASMAG 261
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 262 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 318
>gi|409427298|ref|ZP_11261816.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. HYS]
Length = 320
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 159/350 (45%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+PT+HP+N++ + DF L P F+ + G+P ID+ + A R R LL
Sbjct: 6 KPTLHPRNRH-QGRYDFPQLIKSSPELGRFMITNPHGKPSIDFANPEAVRVFNRALLKAQ 64
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ W IP LCP +P R++Y+H + DLL+ R G V+ DIG GANCIYP
Sbjct: 65 YGIQHWDIPADYLCPPIPGRADYVHVLADLLAQENNGEIPR-GAHVQALDIGVGANCIYP 123
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W F+GSD+ AL A V++N + + I +R+ N +
Sbjct: 124 LLGHSDYRWRFLGSDIDATALAAAGAIVQAN-GLGKAINLRQQGNRKH------------ 170
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L+G++ E+FD +CNPPF
Sbjct: 171 ---------------------------------------ILLGLLNSDERFDLTLCNPPF 191
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S EEA P + GG E+ C GGE F+++++ +S +L
Sbjct: 192 HASREEATRGSQRKWRALGKADPKRKLPVLNFGGQNNELWCEGGEIRFVSQLVTESASLG 251
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
Q W+TS+V + SNL + + L+K G + E QGQ +AW+F
Sbjct: 252 QQVLWFTSLVSKASNLPGIQAALKKAGALDQRVVEMGQGQKQSRMIAWTF 301
>gi|347536136|ref|YP_004843561.1| ribosomal RNA large subunit methyltransferase F [Flavobacterium
branchiophilum FL-15]
gi|345529294|emb|CCB69324.1| Ribosomal RNA large subunit methyltransferase F [Flavobacterium
branchiophilum FL-15]
Length = 311
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 166/359 (46%), Gaps = 71/359 (19%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
+ + ++ +HP+NK+ + DF LL S P + FVF + ID+ + A + L
Sbjct: 2 KSKNTTDKVPMHPRNKHRDGY-DFELLMSQCPMLKKFVFVNEFNTKTIDFANPEAVKCLN 60
Query: 66 RVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFD 121
+ LL+ + L +W IP LCP +P R++YIH + D L + IPT GD V G D
Sbjct: 61 QSLLITYYDLQYWDIPPFNLCPPIPGRADYIHHLADFLGQHCGGTIPT----GDGVLGLD 116
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
IG GANCIYP+LG L WSFVG+D+ + AL+ ++ + NP++ + I
Sbjct: 117 IGIGANCIYPILGHHLYQWSFVGTDINEEALQNCKRIISKNPNLVDYI------------ 164
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
S+Q ++N+ + ++ ++
Sbjct: 165 ---------SLQLQTNIKY------------------------------IFKNIILPEDK 185
Query: 242 FDFCICNPPFFESMEEA--GLNPKTS---------CGGTPEEMVCSGGERAFITRIIEDS 290
F F ICNPPF S +E N KT+ G E+ C GGE FI ++I +S
Sbjct: 186 FTFSICNPPFHSSEDEVLQHNNRKTTHLNTAKGQNFSGNQNELWCEGGELTFINQMIYES 245
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
W+T++V +K +LK + + L +V V T QGQ +AW+F P +
Sbjct: 246 AKYPMQCLWFTTLVSKKVHLKTIYNTLNRVNVAQHHTISMAQGQKNSRFIAWTFQTPQQ 304
>gi|330860704|emb|CBX70997.1| ribosomal RNA large subunit methyltransferase F [Yersinia
enterocolitica W22703]
Length = 320
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 159/360 (44%), Gaps = 76/360 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ A + L + LL
Sbjct: 9 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISIDFASPLAVKMLNKALLK 67
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G V DIG GA
Sbjct: 68 HFYGIEYWDIPADFLCPPIPGRADYVHHLADLLASCNDGVIP----QGKNVAVLDIGVGA 123
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + +++ N +
Sbjct: 124 NCIYPIIGQREYGWRFTGTDIDPQALSAAKMVVSMNPTLKNTLRLKQQKNPQV------- 176
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ E++D +
Sbjct: 177 --------------------------------------------IFDGILAVNERYDATL 192
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 193 CNPPFHGSAEEAAATTRRKLHKLGKSEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 252
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P ++
Sbjct: 253 ATKAQNCFWFTSLISKKTTLPAIYHALRYANAVEVRTVDMAQGQKVSRFVAWTFLTPEQQ 312
>gi|407684639|ref|YP_006799813.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii str.
'English Channel 673']
gi|407246250|gb|AFT75436.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii str.
'English Channel 673']
Length = 329
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 163/384 (42%), Gaps = 110/384 (28%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HPKN + P L YP+ + F+ ++ G ID+T A + L LL H + L
Sbjct: 1 MHPKNLHKNGYP-MDTLCQTYPALKSFLVRAKSGNISIDFTSPKAVKVLNAALLHHYYRL 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDK--------VKGFDIGTGA 126
+W IPDG LCP VP R++YIH I DLL S ++S +G++ V+G DIG GA
Sbjct: 60 EYWDIPDGYLCPPVPGRADYIHGIADLLKST---SSSAHGEQSQQGKDQNVRGLDIGVGA 116
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
N IYP++G + WSFVGSD+ DVA++ A+ N + ++RK N S
Sbjct: 117 NAIYPIIGVTSYDWSFVGSDVDDVAVKSAKAIASKNSVLVHKFQVRKQLNRAS------- 169
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ GV+ E+F F +
Sbjct: 170 --------------------------------------------IFNGVIEANERFTFTM 185
Query: 247 CNPPFFESMEEA--GLNPKTS--------------------------------------- 265
CNPPF +S +EA G KTS
Sbjct: 186 CNPPFHKSAQEALSGTRRKTSNLTRNKQKRSGAKFTDNREQGFEHRTSKLQGKNAAYQGK 245
Query: 266 -----CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKV 320
G E+ C GGE AFI R++++SV++K W+T +V + ++LK + + +
Sbjct: 246 DANLNFAGQANELWCEGGELAFIQRMVKESVSVKDNVEWFTCLVSKSAHLKPIKTSIDYY 305
Query: 321 GVTIVKTTEFVQGQTCRWGLAWSF 344
G K + QG +AW+F
Sbjct: 306 GAAQCKVIDMGQGSKLSRFVAWTF 329
>gi|71908488|ref|YP_286075.1| SAM-dependent methyltransferase [Dechloromonas aromatica RCB]
gi|123626897|sp|Q47C26.1|RLMF_DECAR RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|71848109|gb|AAZ47605.1| 23S rRNA m(6)A-1618 methyltransferase [Dechloromonas aromatica RCB]
Length = 340
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 164/352 (46%), Gaps = 79/352 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+NK +E DFA LA+ + + ++ G ID+ + A + L R +L+H +G+
Sbjct: 1 MHPRNKNAEGY-DFAALAATSAALAKHIKTTQAGTASIDFANPAAVKMLNRAILMHHYGV 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIYP 131
W IP G LCP +P R++YIH + DLL++ IP+ G V+ DIG GAN +YP
Sbjct: 60 KGWDIPAGYLCPPIPGRADYIHSVADLLATCNKKNIPS----GPGVRVLDIGVGANMVYP 115
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G + GWSF+G D+ + AL A+ + NP ++ IE+R +
Sbjct: 116 LIGHAEYGWSFLGVDIDEAALANAQSIIGKNPELASDIELRH----------------QP 159
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
V D + G++R GE FD ICNPPF
Sbjct: 160 VWDN-----------------------------------IFTGLLRSGEVFDLSICNPPF 184
Query: 252 FESMEE-------------------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
S ++ P+ + GG E+ C+GGERAF+ R+IE S
Sbjct: 185 HNSPDDVHAVSQRKWNNLNKPGAKRGAAEPRLNFGGGGSELWCNGGERAFVKRMIEQSCN 244
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ + W+TS++ + NL + + L+K V + QGQ +AW+F
Sbjct: 245 IPKRVMWFTSLLSQGDNLPHIEAALKKAKVVESRIIPMAQGQKQSRLVAWTF 296
>gi|270260982|ref|ZP_06189255.1| putative SAM-dependent methyltransferase [Serratia odorifera 4Rx13]
gi|270044466|gb|EFA17557.1| putative SAM-dependent methyltransferase [Serratia odorifera 4Rx13]
Length = 336
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 165/357 (46%), Gaps = 70/357 (19%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
K++ +++ +HP+N++ DF L P+ EPFV + G +D+ D A + L
Sbjct: 18 KKKTFPQQKSGLHPRNRHRSRY-DFPALIVSCPALEPFVKPNAWGDISVDFADPAAVKML 76
Query: 65 TRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
R LL H +G+ W IP LCP +P R++Y+H + DLL+++ R G V D+G
Sbjct: 77 NRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKGVAILDVG 135
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
GANCIYP++G GW F GS++ V+L A+ V+ NP + + +R
Sbjct: 136 IGANCIYPIVGLREYGWRFTGSEIDPVSLNSAKMIVEMNPTLRNSVRLR----------- 184
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+Q + ++G ++GV E+FD
Sbjct: 185 --------LQKQPEFILNG-----------------------------IIGVA---EKFD 204
Query: 244 FCICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRII 287
+CNPPF S +EA P + GG E+ C GGE AF+ +++
Sbjct: 205 ATLCNPPFHGSEQEARASTRLKLHKLGKGEVADKPIQNFGGKNNELWCEGGEEAFVRKMV 264
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
E+SV Q W+TS++ + + L + L+ G V+T E QGQ +AW+F
Sbjct: 265 EESVGKAQNCLWFTSLISKNTTLPSIYHALKLAGAVEVRTIEMAQGQKISRFVAWTF 321
>gi|148975945|ref|ZP_01812734.1| putative SAM-dependent methyltransferase [Vibrionales bacterium
SWAT-3]
gi|145964690|gb|EDK29943.1| putative SAM-dependent methyltransferase [Vibrionales bacterium
SWAT-3]
Length = 414
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 165/376 (43%), Gaps = 85/376 (22%)
Query: 2 GSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNAT 61
GS++ + + +HP+N+++ DF L + P + + + G I+++D A
Sbjct: 80 GSQRNKNTVKPVAGLHPRNQHTGRY-DFEQLVAALPELKAHLIKNPVGEDTINFSDPLAV 138
Query: 62 RELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF 120
+ L + LL H +G+ W IP G LCP +P R++YIH + D+L+S+ N VK
Sbjct: 139 KLLNKALLAHHYGVKHWDIPAGYLCPPIPGRADYIHRVADILNSDG-QGEPYNHQSVKAL 197
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIG GANCIYP++GA+ W GSD+ V+++ A SN ++ I+ R +SES
Sbjct: 198 DIGVGANCIYPIIGATEYKWRCTGSDVDPVSVKAANFIAASNVNLKGKIKARLQADSES- 256
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
+ GV++D E
Sbjct: 257 --------------------------------------------------IFKGVIKDNE 266
Query: 241 QFDFCICNPPFFESMEEAGL-------------------------------NPKTSCGGT 269
++D ICNPPF S+EEA P + GG
Sbjct: 267 RYDVTICNPPFHSSLEEAEKGTQRKLDNLAANRAKKAGQTFKPESKKAKQNKPTLNFGGQ 326
Query: 270 PEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTE 329
E+ C GGE AFI ++ +S W+T+++ +K N+ L S+L K+ VK E
Sbjct: 327 KAELWCPGGEAAFIMKMARESQLFATQVLWFTTLISKKDNVDMLRSELGKLKAKHVKVVE 386
Query: 330 FVQGQTCRWGLAWSFV 345
QGQ +AW+F+
Sbjct: 387 MSQGQKVSRFVAWTFM 402
>gi|322832074|ref|YP_004212101.1| rRNA (adenine-N(6)-)-methyltransferase [Rahnella sp. Y9602]
gi|321167275|gb|ADW72974.1| rRNA (adenine-N(6)-)-methyltransferase [Rahnella sp. Y9602]
Length = 322
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 163/362 (45%), Gaps = 80/362 (22%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L + P PFV ++ G +D+ + A + L R LL
Sbjct: 9 QEKSGLHPRNRHRSRY-DFPALIASSPELAPFVVENKWGDLSVDFANAQAVKALNRALLR 67
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG-----FDIGT 124
+ + NW IP LCP +P R++YIH + DLL+ S NG+ +G DIG
Sbjct: 68 DCYQIENWDIPADYLCPPIPGRADYIHHLADLLAG------SNNGNIPQGKDISVLDIGV 121
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYP++G GW F S++ V++ A+K V +NP ++ + R
Sbjct: 122 GANCIYPIIGLREYGWRFTASEIDPVSMAAAKKIVATNPQLTNQVRFRL----------- 170
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
+A+P +L ++R E++D
Sbjct: 171 ----------------------QAKPQR------------------ILDTIIRHDERYDA 190
Query: 245 CICNPPFF-----------ESMEEAGLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF + GL+ + GG E+ C GGE AF+ R+ E
Sbjct: 191 VLCNPPFHASAADAASGSQRKRQNLGLDRRAGTAELNFGGQHNELWCEGGEEAFVVRMAE 250
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPA 348
+S Q WYT ++ +K+ L L LR+ T V+T E V G +AW+F+ P+
Sbjct: 251 ESAGKAQNCFWYTVLISKKTTLPLLYDALREEEATDVRTVEMVHGNKISRFVAWTFLTPS 310
Query: 349 RK 350
++
Sbjct: 311 QQ 312
>gi|410632613|ref|ZP_11343268.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola arctica
BSs20135]
gi|410147850|dbj|GAC20135.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola arctica
BSs20135]
Length = 303
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 162/357 (45%), Gaps = 85/357 (23%)
Query: 17 HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLN 76
H +N + ++ P A L YP+ + V DG I++ D + L LL H + +
Sbjct: 3 HSRNLHQDSYP-LAELVQSYPALQSHVVTKPDGGKTINFADPEGVKTLNAALLAHYYQVE 61
Query: 77 WW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYPL 132
+W IP G LCP VP R++Y+H++ DLL+ + ++P G+ + G DIG GAN IYP+
Sbjct: 62 FWDIPAGYLCPPVPGRADYVHYLADLLAKDNDGVVP----KGNTINGLDIGCGANVIYPI 117
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+ GW +G+D+ V+++ A + +N ++ I+IR D+ +
Sbjct: 118 IATRSYGWKMLGTDIDPVSIKSANTIINANTVLTGCIDIRLQDSQKH------------- 164
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ GVV+ + F FC+CNPPF
Sbjct: 165 --------------------------------------IFSGVVKTDDHFAFCMCNPPFH 186
Query: 253 ESMEEA------------------GLNPKT-------SCGGTPEEMVCSGGERAFITRII 287
+S E+A G + KT + G E+ C GGE FI ++I
Sbjct: 187 QSAEQAKAVSQRKVNNLAKNKSKRGSHLKTQKQGAELNFSGQSNELWCEGGELKFIQQMI 246
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++S +W++S+V +K NL + LR++GV+ VKT E QG+ +AW F
Sbjct: 247 KESRDYADQIQWFSSLVSKKDNLTQIYKSLRELGVSDVKTIEMAQGKKVSRFVAWRF 303
>gi|225563441|gb|EEH11720.1| DUF890 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 445
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 166/349 (47%), Gaps = 88/349 (25%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DFA+LA YP+F A +ELT+ LL D GL+ +P +LCP
Sbjct: 13 DFAVLALQYPNF--------------------AKQELTKSLLKRDFGLHLDLPSDRLCPP 52
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDK--VKGFDIGTGANCIYPLLG-ASLLGWSFVG 144
VPNR NYI W++DLL S + + V G DIGTGA+CIYPLLG A W F
Sbjct: 53 VPNRFNYILWLQDLLDSTSADYSDGYDQERDVFGLDIGTGASCIYPLLGCAQRPKWRFAA 112
Query: 145 SDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHM 204
+D+ L++A NV+ N K+D S I ES T ++ +++
Sbjct: 113 TDIDAKNLKYARDNVQRN----------KLD---SRIQIIESSTSNALIPLETINI---- 155
Query: 205 DEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE------- 257
P S+S + DF +CNPPF++S +E
Sbjct: 156 -----PESNS--------------------------RLDFTMCNPPFYQSRDELISSAKA 184
Query: 258 AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKL 317
P ++C G EM+ GGE F+TR+I +S+ L+ +WYTSMVG+ S++ L+ L
Sbjct: 185 KQRPPFSACTGAEVEMITPGGEVEFVTRMIRESIELRNRVQWYTSMVGKFSSVATLLDIL 244
Query: 318 RKVGVTIVKTTEFVQG-QTCRWGLAWSFVP---------PARKIISPHV 356
RK G EFVQG +T RW + WS++ P R+ I+ H+
Sbjct: 245 RKEGNENWAVAEFVQGSKTRRWAIGWSWMDYRPGTGPSRPHRQSIAKHL 293
>gi|205829590|sp|A6V0S3.2|RLMF_PSEA7 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
Length = 334
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 165/357 (46%), Gaps = 77/357 (21%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R+ +HP+N++ DF L + P E FV + G+P ID+ D A + R LL
Sbjct: 13 RKSASPLHPRNRHLGRY-DFPGLIAGNPELERFVIVNPYGKPSIDFADPLAVKAFNRALL 71
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTG 125
+ + W IP+G LCP +P R++Y+H++ DLL ++ +IP G ++ D+GTG
Sbjct: 72 QQFYDVREWNIPEGYLCPPIPGRADYLHYLADLLGASHDGVIP----RGTGLRALDVGTG 127
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPLLG GW FVG+D+ +L A + +NP + IE+R+
Sbjct: 128 ANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANPRFAAAIELRR------------ 175
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+P F G+V E+FD
Sbjct: 176 -----------------------QPDRRHIFE----------------GLVDSAERFDMT 196
Query: 246 ICNPPFFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIE 288
+CNPPF S++EA L+P + GG E+ C GGE AF+ +
Sbjct: 197 LCNPPFHASLDEATRGSRRKWKNLGKLDPGRTLPLLNFGGQGAELHCEGGEAAFLASMAG 256
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T++V + SNL L +L+ +G + ++ + QGQ +AW+++
Sbjct: 257 ESRAFATQVFWFTTLVSKASNLPNLQERLKTLGASDIRVVDMAQGQKQSRFVAWTYL 313
>gi|333368830|ref|ZP_08460985.1| methyltransferase [Psychrobacter sp. 1501(2011)]
gi|332975998|gb|EGK12869.1| methyltransferase [Psychrobacter sp. 1501(2011)]
Length = 328
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 158/360 (43%), Gaps = 85/360 (23%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N + + DF L P E + G I+++D +A L + LL +G
Sbjct: 23 TLHPRNPH-QGRYDFDKLIKALPELEKHAITNPSGEATINFSDADAVLTLNKALLALHYG 81
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ +W +P G LCP +P R++YIH + DLL+ N + K DIGTGA+ IYP++
Sbjct: 82 IKYWDLPKGYLCPPIPGRADYIHQVADLLADN---NSGSENKKPHVLDIGTGASLIYPIV 138
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G+ GW F +D+ V++ A+ + NP++ +L+ +++ N ++
Sbjct: 139 GSQSYGWYFTATDIDPVSINTAKTICEINPNLKKLVTVKQQKNPKN-------------- 184
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+ G++ + + FD +CNPPF
Sbjct: 185 -------------------------------------IFKGIIGEHDYFDITVCNPPFHG 207
Query: 254 SMEE----------------AGLNPKTSC-------------GGTPEEMVCSGGERAFIT 284
SM+E A NP + GG E+ GGE AFI+
Sbjct: 208 SMQEVLDANNRKQTKLQKNRARRNPNSQTAKKFADAKNNLNFGGQNAELWTEGGEFAFIS 267
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
R+I +SV Q W+T++V R NLK L + LR+VG +KT GQ LAW F
Sbjct: 268 RMINESVDYAQQVNWFTTLVSRAENLKPLDALLRRVGARQIKTINMQHGQKASRILAWRF 327
>gi|119944372|ref|YP_942052.1| putative SAM-dependent methyltransferase [Psychromonas ingrahamii
37]
gi|205829573|sp|A1SSI8.1|RLMF_PSYIN RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|119862976|gb|ABM02453.1| 23S rRNA m(6)A-1618 methyltransferase [Psychromonas ingrahamii 37]
Length = 310
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 163/356 (45%), Gaps = 76/356 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ + +HP+N + + D L P F+ + G +D+ + A L +VLL
Sbjct: 6 QVKKLLHPRNLHRGHY-DLKQLCEQSPLLSTFLRTNPKGEQTLDFAEPQAVLLLNQVLLK 64
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFDIGTGA 126
+ +++W IP G LCP +P R +YIH++ DLL IP G +VK DIGTGA
Sbjct: 65 QFYHVDFWQIPKGYLCPPIPGRVDYIHYLADLLGDTFHGKIP----EGKQVKVLDIGTGA 120
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP+LG+ GWSFVG+D+ ++++ A +KSN + I+++ N ++
Sbjct: 121 NCIYPILGSQSYGWSFVGTDIDPLSVKMAGLIIKSNVSLKPFIKVQLQANKQA------- 173
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G+++ ++F +
Sbjct: 174 --------------------------------------------IFAGIIKPKDKFTLTM 189
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF SME+A L+ + G E+ C+GGE F+ ++I++S
Sbjct: 190 CNPPFHASMEKALAGSARKIKNLSNDQNNLSRVLNFAGQEGELCCAGGEIRFLKQMIQES 249
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
+ W+TS+V + N+ L +L KVG VK + QGQ +AWSF+P
Sbjct: 250 KDYARQVCWFTSLVSKSDNIAPLKQQLEKVGAEHVKVIKMAQGQKVSRFIAWSFLP 305
>gi|330829004|ref|YP_004391956.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
B565]
gi|423210304|ref|ZP_17196858.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
AER397]
gi|328804140|gb|AEB49339.1| Ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
B565]
gi|404616192|gb|EKB13150.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
AER397]
Length = 323
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 153/353 (43%), Gaps = 75/353 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ + +H +N++ DF L P VF + G ID+ D +A + L R LL
Sbjct: 15 DRKSGLHSRNRHQAGY-DFEALCLRTPELAAHVFINDYGTRTIDFADPDAVKTLNRALLA 73
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGAN 127
H +G+ +W +P G LCP +P R +Y+HW DLL S+ +PT G V+ DIG GAN
Sbjct: 74 HHYGIAHWDLPAGYLCPPIPGRVDYLHWAADLLAESAGQLPT----GKGVRVLDIGVGAN 129
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLG GW FVGSD+ V+++ A KSN + IE R
Sbjct: 130 CIYPLLGCREYGWRFVGSDIDPVSVKAATLLAKSN-GLGNQIECR--------------- 173
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+Q N V G++ E+F +C
Sbjct: 174 ----LQGNPNH--------------------------------VFRGIIGPKERFALTLC 197
Query: 248 NPPFFESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S+EEA P + GG E+ C GGE AF+ +I S
Sbjct: 198 NPPFHASLEEASKGTERKLRNLGKEVTGAPVLNFGGQKAELWCEGGEAAFLANMIAQSKE 257
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++S+V +K NL L +VG V+ + QG LAWSF+
Sbjct: 258 FATQCLWFSSLVSKKENLPGAKKALSRVGARQVRVIDMAQGNKVSRILAWSFL 310
>gi|399010514|ref|ZP_10712885.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM17]
gi|398106862|gb|EJL96877.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM17]
Length = 341
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 166/360 (46%), Gaps = 78/360 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPQLIKSTPELGAFVIINPYGKESIDFANPAAVRVFNRALLKA 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP VP R++Y+H++ DLL+ +IP G V+ DIG GAN
Sbjct: 86 FYGIAHWDIPADFLCPPVPGRADYVHFLADLLAERNEGVIP----RGAAVRVLDIGVGAN 141
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G W F+GSD+ AL A+ V++N +++ I +R+ N +
Sbjct: 142 CIYPLIGHCDYRWQFLGSDIDTTALAAAKAIVQAN-GLNKAIGLRQQSNRKQ-------- 192
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L+G++ E+FD +C
Sbjct: 193 -------------------------------------------ILLGLLESDERFDLTLC 209
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S+EEA P + GG E+ C GGE F+T++I +S
Sbjct: 210 NPPFHASLEEATRGSQRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEARFVTQLIGES 269
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ Q W++++V + SNL + + L+K G + E QGQ +AW+F A++
Sbjct: 270 AQVAQQVLWFSTLVSKASNLPAIQAALKKAGALESQVVEMSQGQKQSRFVAWTFKDKAQQ 329
>gi|407700917|ref|YP_006825704.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250064|gb|AFT79249.1| 23S rRNA mA1618 methyltransferase [Alteromonas macleodii str.
'Black Sea 11']
Length = 307
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 157/360 (43%), Gaps = 103/360 (28%)
Query: 32 LASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPN 90
L YP+ +PF+ ++ G ID+T+ A + L LL H + L +W IPDG LCP VP
Sbjct: 4 LCQSYPALKPFLVRAKSGNTSIDFTNPQAVKVLNAALLHHYYRLEYWDIPDGYLCPPVPG 63
Query: 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150
R++YIH I DLL + T +G V+G DIG GAN IYP++G + W FVGSD+ D
Sbjct: 64 RADYIHGIADLLKA-----TDCHGQNVRGLDIGVGANAIYPIIGITSYNWIFVGSDVDDA 118
Query: 151 ALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEP 210
A++ A N ++ +RK +
Sbjct: 119 AVKSARAIASKNKVLTNKFSVRK-----------------------------------QA 143
Query: 211 SSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA--GLNPKTS--- 265
S ++ F+ GV+ + E F F +CNPPF +S ++A G KTS
Sbjct: 144 SRANIFS----------------GVIEENEHFTFTMCNPPFHKSAQDALSGTRRKTSNLT 187
Query: 266 -----------------------------------------CGGTPEEMVCSGGERAFIT 284
G E+ C GGE AFI
Sbjct: 188 RNKQKRSGEKFTGNQAQSFGDRASKLGGKQAPYQGQDVNFNFAGQANELWCEGGELAFIQ 247
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
R+I++SVA+K +W+T +V + ++LK + + + G ++ K + QG +AW+F
Sbjct: 248 RMIQESVAVKDNVKWFTCLVSKSAHLKPIKTSIDYYGASLCKVVDMGQGSKVSRFVAWTF 307
>gi|330811520|ref|YP_004355982.1| ribosomal RNA large subunit methyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423699076|ref|ZP_17673566.1| hypothetical protein PflQ8_4657 [Pseudomonas fluorescens Q8r1-96]
gi|327379628|gb|AEA70978.1| Ribosomal RNA large subunit methyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|387997181|gb|EIK58511.1| hypothetical protein PflQ8_4657 [Pseudomonas fluorescens Q8r1-96]
Length = 341
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 72/341 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPALIKSTPELAKFVIINPYGKESIDFASPEAVRVFNRALLKA 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP VP R++Y+H++ DLL+S+ R G VK DIGTGANC+Y
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASHNEGEIPR-GAAVKVLDIGTGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GS++ A+ A+ V+SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWHFLGSEIDPTAIASAKAIVQSN-GLNKAIQLRQQANRKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ D E+FD +CNPP
Sbjct: 193 ----------------------------------------ILQGLLDDTERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F S+EEA +PK GG E+ C GGE F+T++I +S L
Sbjct: 213 FHASLEEATKGSQRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEARFVTQLIGESAQL 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ 334
W++++V + SNL + + L+K G + E QGQ
Sbjct: 273 AGQVLWFSTLVSKASNLPAIQTALKKAGALHSQVVEMSQGQ 313
>gi|240276043|gb|EER39556.1| DUF890 domain-containing protein [Ajellomyces capsulatus H143]
Length = 287
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 160/342 (46%), Gaps = 87/342 (25%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DFA+LA YP+F A +ELT+ LL D GL+ +P +LCP
Sbjct: 13 DFAVLALQYPNF--------------------AKQELTKSLLKRDFGLHLDLPSDRLCPP 52
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGD------KVKGFDIGTGANCIYPLLG-ASLLGW 140
VPNR NYI W++DLL S T++ D + G DIGTGA+CIYPLLG A W
Sbjct: 53 VPNRFNYILWLQDLLDS----TSANYSDGYDQERDIFGLDIGTGASCIYPLLGCAQRPKW 108
Query: 141 SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDM 200
F +D+ L++A NV+ N S + I
Sbjct: 109 RFAATDIDAKNLKYARDNVQRNKLDSRIQIIE---------------------------- 140
Query: 201 SGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE--- 257
SS+S+ +P A + + + DF +CNPPF++S +E
Sbjct: 141 ----------SSTSNALIPLEA----------INIPESNSRLDFTMCNPPFYQSRDELIS 180
Query: 258 ----AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
P ++C G EM+ GGE F+TR+I +S+ L+ +WYTSMVG+ S++ L
Sbjct: 181 SAKAKQRPPFSACTGAEVEMITPGGEVEFVTRMIRESIELRNRVQWYTSMVGKFSSVATL 240
Query: 314 ISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIISP 354
++ LRK G EFVQG +T RW + PP++ +P
Sbjct: 241 LNILRKEGNENWAVAEFVQGSKTRRWAIGTLQTPPSKHRQTP 282
>gi|90019953|ref|YP_525780.1| putative SAM-dependent methyltransferase [Saccharophagus degradans
2-40]
gi|123396751|sp|Q21P11.1|RLMF_SACD2 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|89949553|gb|ABD79568.1| protein of unknown function DUF890 [Saccharophagus degradans 2-40]
Length = 320
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 169/372 (45%), Gaps = 78/372 (20%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M + R++ +HP+N + N DF L + +P ++ + G ID+ + A
Sbjct: 1 MHKSANSKTRKQSKGLHPRNIH-RNGYDFDALKACHPPLVQYIKCNPVGAATIDFANSAA 59
Query: 61 TRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLL-----SSNIIPTTSRNG 114
+ L LL H + + +W IPDG LCP +P R +YIH+I +LL S I +
Sbjct: 60 VKALNTALLQHHYKIESWSIPDGALCPPIPGRIDYIHYIAELLGCPLPSGKINTANTCTN 119
Query: 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174
+ VK D+GTGAN IY LL ++ GW VGSD+
Sbjct: 120 NAVKMLDVGTGANGIYTLLACAVYGWRCVGSDI--------------------------- 152
Query: 175 DNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234
NSES +++ L +N ++ ++ +P+ + F+
Sbjct: 153 -NSESLANVKAVLA-------NNPTLNANISLRLQPNKDAFFS----------------Q 188
Query: 235 VVRDGEQFDFCICNPPFFESMEEA--GLN------------------PKTSCGGTPEEMV 274
+++ + FD +CNPPF S EEA G N P + GG E+
Sbjct: 189 IIQTDDYFDVSVCNPPFHASQEEASKGTNRKLHNLARSRNKAHTAKQPSLNFGGQHAELW 248
Query: 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ 334
C+GGER F+ ++I++S A Q W+TS+V + N++ + +RK+G T V+ E +QG
Sbjct: 249 CNGGERLFLKKMIKESQAFAQQVGWFTSLVSKSENVQPALKLIRKLGATEVREIEMMQGN 308
Query: 335 TCRWGLAWSFVP 346
+AW F P
Sbjct: 309 KKTRVIAWRFKP 320
>gi|426411337|ref|YP_007031436.1| ribosomal RNA large subunit methyltransferase [Pseudomonas sp. UW4]
gi|426269554|gb|AFY21631.1| ribosomal RNA large subunit methyltransferase [Pseudomonas sp. UW4]
Length = 342
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 166/355 (46%), Gaps = 78/355 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ ++HP+N++ + DF L P + FV + G+ ID+ A R R LL
Sbjct: 26 KEKASLHPRNRH-QGRYDFPALIKSTPELKKFVIINPYGKESIDFASPEAVRVFNRALLK 84
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ W IP LCP VP R++Y+H++ DLL+S +IP G VK DIG GA
Sbjct: 85 SFYGIAHWDIPADYLCPPVPGRADYVHFLADLLASGNDGVIP----RGAAVKVLDIGMGA 140
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NC+YPL+G S W F+GSD+ A+ A+ V+SN +++ I++R+ N +
Sbjct: 141 NCVYPLIGYSDYRWQFLGSDIDATAIAAAKAIVQSN-GLNKAIQVRQQSNPKQ------- 192
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L G++ E+FD +
Sbjct: 193 --------------------------------------------ILTGLLESAERFDLTM 208
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG E+ C GGE F+T+++ +
Sbjct: 209 CNPPFHASLDEATRGSTRKWRALGKADPKRKLPVLNFGGQSAELWCEGGEVRFVTQLVSE 268
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
SV + Q W++++V + SNL + + L+K G + E QGQ +AW+F
Sbjct: 269 SVQVAQQVLWFSTLVSKASNLPAIQTALKKAGALESQVVEMSQGQKQSRFVAWTF 323
>gi|150025816|ref|YP_001296642.1| SAM-dependent methyltransferase [Flavobacterium psychrophilum
JIP02/86]
gi|205829578|sp|A6H0G2.1|RLMF_FLAPJ RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|149772357|emb|CAL43835.1| Probable SAM-dependent methyltransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 314
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 75/353 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N + DF L + + VF + I++++ A + L LL+
Sbjct: 8 EKTNLHPRNLHKFGY-DFEALTTCSSELKNHVFTNEYDTQTINFSNPEAVKALNNALLIA 66
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGAN 127
+ + NW IP LCP +P R++Y+H+I DLL++ IIP G+ V G DIG GAN
Sbjct: 67 YYNIKNWGIPQDYLCPPIPGRADYLHYIADLLATTNNQIIP----EGENVIGLDIGIGAN 122
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYP++G ++ WSFVG+D+ + A++ +K +++NP + + I +++
Sbjct: 123 CIYPIIGNAIYDWSFVGTDIDEKAIQNCKKIIENNPKLIDAISLQQ-------------- 168
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
Q ES + ++ ++F F IC
Sbjct: 169 -----QVESRF--------------------------------IFKNIILTDDKFAFTIC 191
Query: 248 NPPFFESMEEA---------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S EA NP + GG E+ C GGE FIT++I +S
Sbjct: 192 NPPFHNSAAEATKSSARKVNNLQEIRTKNPVLNFGGQNTELWCDGGEIGFITQMIYESAK 251
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V ++ NL + L KV +KT + QGQ +AW+F+
Sbjct: 252 YPMQVLWFTTLVSKRENLSSIYKTLNKVSAVEIKTIDMAQGQKNSRIVAWTFL 304
>gi|282890575|ref|ZP_06299098.1| hypothetical protein pah_c022o170 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499572|gb|EFB41868.1| hypothetical protein pah_c022o170 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 293
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 165/350 (47%), Gaps = 74/350 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E + +H +N++ E P DF LL FV + G ID+T+ A + L + +L
Sbjct: 3 ELKTELHLRNRHRE-PYDFKLLIKNCSDLAKFVATNSYGNESIDFTNPIAVKILNKAILR 61
Query: 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLL---SSNIIPTTSRNGDKVKGFDIGTGAN 127
+ + W IP+ LCP +P R++Y+H+I DLL + IIP G K+ DIG GAN
Sbjct: 62 VFYNITWDIPEHFLCPPIPGRADYVHYIADLLGVSNRGIIP----QGKKISILDIGVGAN 117
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW+FVG+D+ A+ A +K N +++E IEIR
Sbjct: 118 CIYPLIGYREYGWNFVGTDIDPRAISIANGIIKQN-NLTEAIEIR--------------- 161
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ SSS+ F G++ D FD +C
Sbjct: 162 --------------------LQKSSSNVFK----------------GILSDNSAFDVSMC 185
Query: 248 NPPFFESMEEA---------GLNPKTSC---GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
NPPF + EA L KT GG E+ C GGE AFI R+IE+S+ +K
Sbjct: 186 NPPFHATPSEARAGTKRKWKNLRIKTDALNFGGQSNELWCPGGEVAFIKRMIEESIHVK- 244
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+W+T++V + S+L + L KV V+T QGQ +AW+F+
Sbjct: 245 -CKWFTTLVSKASSLSNIYQALEKVKPLEVRTINMGQGQKKSRIVAWTFI 293
>gi|238788811|ref|ZP_04632602.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
frederiksenii ATCC 33641]
gi|238723116|gb|EEQ14765.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
frederiksenii ATCC 33641]
Length = 339
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 159/357 (44%), Gaps = 76/357 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ D A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPTAYGDISIDFADPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 83 HFYGIEYWDIPADFLCPPIPGRADYVHHLADLLASCNNGVIP----QGKNIALLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDSQALSAAKMVVSMNPTLKNTLRLK-------------- 184
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ +P + + G++ E++D +
Sbjct: 185 -------------------HQKDPKA------------------IFEGILALNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKGEVAFKPVQNFGGKNSELWCEGGEEGFVSRMVVES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347
+ W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P
Sbjct: 268 ATKAKNCFWFTSLISKKTTLPAIYHALRYANAVEVRTIDMAQGQKVSRFVAWTFLTP 324
>gi|300716006|ref|YP_003740809.1| hypothetical protein EbC_14270 [Erwinia billingiae Eb661]
gi|299061842|emb|CAX58958.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 310
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 169/354 (47%), Gaps = 70/354 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N++ DF L + +P FV ++ G +++ D A R L + LL H
Sbjct: 6 EKTQLHPRNRHRARY-DFPALIASFPPLADFVAVNQHGDESVNFADPAAVRTLNQALLQH 64
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + NW IP+G LCP VP R++Y+H + DLL+ + + R+ + DIG GANCIY
Sbjct: 65 FYQIANWTIPEGFLCPPVPGRADYVHHLADLLAEDNKRSVPRD---ITVLDIGCGANCIY 121
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS++ + A++ A + +NP ++ + +R+
Sbjct: 122 PLIGFREYGWRFTGSEVNEEAMKAANAIIAANPDLNRGVRLRR----------------- 164
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
Q +S++ S G++ E F +CNPP
Sbjct: 165 --QKDSSLMFS--------------------------------GIIHKNEFFHAVMCNPP 190
Query: 251 FFESMEEA-----------GL--NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S +A GL N + GG +E+ C GGE+ FI+R+I +SV +
Sbjct: 191 FHASAGDAQQGTQRKVRNLGLAKNSPLNFGGQQDELWCEGGEKGFISRMIAESVNFSRQC 250
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-PPARK 350
W+TS+V RK NL + L + V +T E QGQ +AW+F+ PAR+
Sbjct: 251 VWFTSLVSRKENLPDIWRALEEHEVVAYRTIEMAQGQKQSRIIAWTFMEKPARE 304
>gi|156974430|ref|YP_001445337.1| putative SAM-dependent methyltransferase [Vibrio harveyi ATCC
BAA-1116]
gi|205829615|sp|A7N060.1|RLMF_VIBHB RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|156526024|gb|ABU71110.1| hypothetical protein VIBHAR_02145 [Vibrio harveyi ATCC BAA-1116]
Length = 388
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 157/357 (43%), Gaps = 87/357 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P + FV + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 78 DFKKLIAAEPQLKSFVIKNPKGEDSINFSDPKAVKMLNKALLAAHYDIEYWDIPDTYLCP 137
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL + + + KV+ D+G GANCIYP++G + GW + GSD
Sbjct: 138 PIPGRADYVHRVAELLDGEVKGKYAHH--KVRALDVGVGANCIYPIVGVTQYGWHYTGSD 195
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A V+ N ++ IE+R+ SES
Sbjct: 196 VDPKSIESARTIVERNVSLNGKIELRQ-QTSESN-------------------------- 228
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G+++ +++D CNPPF S EEA +
Sbjct: 229 ------------------------IYRGIIQPNDRYDITTCNPPFHRSAEEAAMGSQRKL 264
Query: 261 ---------------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
P + GG E+ C GGE AFI ++ +S A
Sbjct: 265 DNLKANQRKKGVKVQAHQAKTPQVKANKPALNFGGQNAELWCEGGEAAFIRKMANESQAF 324
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++ A++
Sbjct: 325 SAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRIVEMSQGQKVSRFMAWSYMDKAQR 381
>gi|195429739|ref|XP_002062915.1| GK19702 [Drosophila willistoni]
gi|194159000|gb|EDW73901.1| GK19702 [Drosophila willistoni]
Length = 296
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 159/346 (45%), Gaps = 67/346 (19%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
R ++ +HP+N +PPD+ LA Y F G+ +++ RELT+VLL
Sbjct: 3 RSKKNQMHPRNVL-RSPPDYTKLAIKYKDFRNVCSLELTGKVTVNFRQERTLRELTKVLL 61
Query: 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCI 129
L+ G L PT+ R NYI W+EDLL + + KV+G DIG G++CI
Sbjct: 62 KEYFQLDVDFAPGSLVPTLALRLNYILWLEDLLGARKV------NSKVRGIDIGCGSSCI 115
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
Y LL A W + + +E+A +NVK N
Sbjct: 116 YSLLAAKKNKWEMLALESKPQNIEYARENVKRN--------------------------- 148
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
+ G + A+P + F +Y + D + + FC+CNP
Sbjct: 149 ---------QLDGLIQVYAQPDKTDIF-------KTYFDTAI------DEQDYCFCLCNP 186
Query: 250 PFFES-----MEEAGLNPK------TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
PFF+S M A NP+ + G+ EE+ C+GGE F+ IIE+S K+
Sbjct: 187 PFFDSNSANPMGGASRNPERRPAPNNARTGSAEELSCAGGEVQFVQCIIEESEIYKERIS 246
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+TSM+G K+N+ ++ L++ G+ V TTEF QG T RW +AWS+
Sbjct: 247 IFTSMLGVKANVPKILVILKERGIEHVATTEFHQGHTTRWAIAWSY 292
>gi|384257180|ref|YP_005401114.1| 23S rRNA mA1618 methyltransferase [Rahnella aquatilis HX2]
gi|380753156|gb|AFE57547.1| 23S rRNA mA1618 methyltransferase [Rahnella aquatilis HX2]
Length = 322
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 167/369 (45%), Gaps = 80/369 (21%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +E+ +HP+N++ DF L + P PFV ++ G +D+ + A +
Sbjct: 2 EKKKVFPQEKSGLHPRNRHRSRY-DFPALIASSPELAPFVVENKWGDLSVDFANAQAVKA 60
Query: 64 LTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG--- 119
L R LL + + NW IP LCP +P R++YIH + DLL+ S NG+ +G
Sbjct: 61 LNRALLRDCYQIENWDIPADYLCPPIPGRADYIHHLADLLAG------SNNGNIPQGKDI 114
Query: 120 --FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177
DIG GANCIYP++G GW F S++ V++ A+K V +NP ++ + R
Sbjct: 115 SVLDIGVGANCIYPIIGLREYGWRFPASEIDPVSMAAAKKIVATNPQLTNQVRFRL---- 170
Query: 178 ESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR 237
+A+P +L ++R
Sbjct: 171 -----------------------------QAKPQR------------------ILDTIIR 183
Query: 238 DGEQFDFCICNPPFF-----------ESMEEAGLNPKTSC-----GGTPEEMVCSGGERA 281
E++D +CNPPF + GL+ + GG E+ C GGE A
Sbjct: 184 HDERYDAVLCNPPFHASAADAASGSQRKRQNLGLDRRAGTAELNFGGQHNELWCEGGEEA 243
Query: 282 FITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341
F+ R+ E+S Q WYT ++ +K+ L L LR+ T V+T E V G +A
Sbjct: 244 FVVRMAEESAGKAQNCFWYTVLISKKTTLPLLYDALREEDATDVRTVEMVHGNKISRFVA 303
Query: 342 WSFVPPARK 350
W+F+ P+++
Sbjct: 304 WTFLTPSQQ 312
>gi|195381937|ref|XP_002049689.1| GJ21733 [Drosophila virilis]
gi|194144486|gb|EDW60882.1| GJ21733 [Drosophila virilis]
Length = 314
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 163/351 (46%), Gaps = 66/351 (18%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N PD+ LA + F +GR +++ + RELT++LLL
Sbjct: 7 KKSAMHPRNVL-RTAPDYTKLAIKHRDFRQVCELELNGRVSLNFRNERTLRELTKMLLLE 65
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
GL+ G L PT+ R NYI W+EDLL+ + D V G DIG G++CIY
Sbjct: 66 YFGLHVEFAPGSLVPTLALRLNYILWLEDLLAPLKL-------DAVHGIDIGCGSSCIYS 118
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LL A W + + +E+A +NVK N ++ L+E+
Sbjct: 119 LLAAKKNQWHMLALESKQTNIEYARENVKRN-NLEHLVEVY------------------- 158
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
A+P ++ F +S + L E F FC+CNPPF
Sbjct: 159 ----------------AQPDKNNIF------KSYFETASRL-----PKEGFHFCLCNPPF 191
Query: 252 FESMEEAGLN-----------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
F+S E P G+ EE+ C+GGE F+ RI+E+S ++ +
Sbjct: 192 FDSNAENPFGGNTRNPQRRPAPNNVRTGSAEELTCAGGEVQFVQRIVEESELHQERVLIF 251
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKI 351
TSM+G K+N+ ++ L+K ++ V TTEF QG T RW +AWSF + K+
Sbjct: 252 TSMLGVKANVPKILDYLQKRQISNVSTTEFHQGHTTRWAVAWSFQQLSLKV 302
>gi|171688132|ref|XP_001909006.1| hypothetical protein [Podospora anserina S mat+]
gi|170944028|emb|CAP70138.1| unnamed protein product [Podospora anserina S mat+]
Length = 460
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 177/355 (49%), Gaps = 79/355 (22%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
+D+T+ A +LT+ LL D L +PD +LCP VPNR NYI W+++L+ ++ +
Sbjct: 69 LDFTEPKAVMQLTKTLLSLDFNLKLELPDDRLCPPVPNRHNYILWLKELVDTS---SYEP 125
Query: 113 NGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171
G G DIGTGA+CIYPLLG + W F +L++A +NV N H+ + I
Sbjct: 126 PGRPACGLDIGTGASCIYPLLGTTQRPSWRF--------SLQYARENVALN-HLEDRI-- 174
Query: 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231
++ G+ +D + + + G E+
Sbjct: 175 --------------TVLGRQPED-TLIPLRGRESEKVI---------------------- 197
Query: 232 LVGVVRDGEQFDFCICNPPFFESMEEAGLN-------PKTSCGGTPEEMVCSGGERAFIT 284
DF + NPPF+ES ++ + P ++C G P EMVC GGE A I+
Sbjct: 198 ---------HIDFTMMNPPFYESKDDMLSSAQSKVRPPHSACTGAPVEMVCEGGEIAHIS 248
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWS 343
R++E+S+ LK+ +WYTSM+G+ S+++ L+ KL+ G+ TEF+QG +T RW L WS
Sbjct: 249 RMLEESLVLKEEVQWYTSMLGKASSVETLVDKLKANGIDNYAITEFIQGNKTRRWALGWS 308
Query: 344 FVP--PARKIISPHVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLN 396
F P PA HVA K + + V A++VL S+ + S A ++N
Sbjct: 309 FGPMRPAE-----HVARVKTSGW--KKVSPPVLAIEVL-SLHPWRSIDHAITRIN 355
>gi|453062525|gb|EMF03515.1| 23S rRNA mA1618 methyltransferase [Serratia marcescens VGH107]
Length = 336
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 162/358 (45%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ PFV + G +D+ D A +
Sbjct: 17 EKKKTFPQQKSGLHPRNRHRSRY-DFPALIASCPALAPFVKPNAWGDVSVDFADPAAVKM 75
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 76 LNRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKGVAILDV 134
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+L A+ V+ NP + + +R
Sbjct: 135 GVGANCIYPIVGLREYGWRFTGSEIDPVSLNSAKMIVEMNPTLRNSVRLR---------- 184
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + + + G++ E+F
Sbjct: 185 ---------LQKQPEL--------------------------------IFSGIIGAAEKF 203
Query: 243 DFCICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA P + GG E+ C GGE AF+ ++
Sbjct: 204 DATLCNPPFHASEQEARASTRRKLHKLGKGEVADKPVQNFGGKNNELWCEGGEEAFVRKM 263
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+E+SV W+TS++ + + L + L G V+T E QGQ +AW+F
Sbjct: 264 VEESVGKANNCLWFTSLISKNTTLPAIYHALNVAGAAEVRTIEMAQGQKISRFVAWTF 321
>gi|336470418|gb|EGO58579.1| hypothetical protein NEUTE1DRAFT_144835 [Neurospora tetrasperma
FGSC 2508]
gi|350291453|gb|EGZ72648.1| hypothetical protein NEUTE2DRAFT_156372 [Neurospora tetrasperma
FGSC 2509]
Length = 541
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 176/343 (51%), Gaps = 69/343 (20%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
+N Y+++P F L P F PF+ D + ++D+ D A +LT+ LL D+GL
Sbjct: 95 RNLYTKDP-SFKYLGQKDPDFAPFL----DSQNQLDFNDPAAVMQLTKTLLRIDYGLKID 149
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSSNII-PTTSRNGDK-------VKGFDIGTGANCIY 130
+P +LCP VPNR NYI W+ LLSS+ P S + D+ + G DIGTGA+ IY
Sbjct: 150 LPPDRLCPPVPNRHNYILWLTSLLSSSSYHPHFSSSPDQKNIDSRPIIGLDIGTGASAIY 209
Query: 131 PLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
PLLG WSF+ +D+ +L +A++N+ H+++L + ++ TP
Sbjct: 210 PLLGCVQHPHWSFIATDIDAHSLSFAQRNI----HLNKLQD--RITLLHRTP-------- 255
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
D+ P S P+L R ++ DF +CNP
Sbjct: 256 ---------------DQPLIPFDS----------------PILT--TRGIDKIDFTMCNP 282
Query: 250 PFFES-------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
PF+ S + P T+C G P EMVC+GGE A I R+I++S+ L++ WYTS
Sbjct: 283 PFYSSPSDLLSSAAKKSRPPLTACTGAPVEMVCAGGEVAHIFRMIDESLVLREKVTWYTS 342
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
M+G+ ++L+ ++ +LRK + TE VQG QT RW + WSF
Sbjct: 343 MIGKVTSLETVVERLRKEKIQNYAVTELVQGKQTKRWVVGWSF 385
>gi|163789337|ref|ZP_02183778.1| SAM-dependent methyltransferase [Flavobacteriales bacterium ALC-1]
gi|159875405|gb|EDP69468.1| SAM-dependent methyltransferase [Flavobacteriales bacterium ALC-1]
Length = 326
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 167/360 (46%), Gaps = 74/360 (20%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ + + +HP++++ E +F L P FV ++ G +D+ + A
Sbjct: 9 QKKKEHPKVKSQLHPRSQHRERY-NFDTLIKSSPELADFVAPNKYGDDSVDFFNPMAVLA 67
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN--IIPTTSRNGDKVKGF 120
L + LL H + + +W IP+ LCP +P R++YIH I DLL N IP G+ +KG
Sbjct: 68 LNKALLKHHYAVEFWEIPEHYLCPPIPGRADYIHNIADLLKGNGSEIP----KGNHIKGL 123
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIG GA+CIYP++G GWSF+GSD + A+ A+ + N + +EIR+
Sbjct: 124 DIGVGASCIYPIIGNHEYGWSFIGSDTNETAITSAKAIEQGNSKLKSSVEIRR------- 176
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
Q++SN G+++ E
Sbjct: 177 ------------QEQSNA--------------------------------FFRGILKPEE 192
Query: 241 QFDFCICNPPFFESMEEA------------GLNPKTSC---GGTPEEMVCSGGERAFITR 285
+ DF +CNPPF S+E+A G P + GG E+ GGE F+
Sbjct: 193 KVDFTMCNPPFHASLEDAQKASLKKLKNLKGRRPSKAVLNFGGQQNELWTKGGEARFVKD 252
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+I +S + W+TS++ +++ LK L+KV T VKT E QGQ +AW+F+
Sbjct: 253 MIYESRNFGKQCFWFTSLISKETTLKPTYKILQKVKATDVKTIEMGQGQKVSRFIAWTFL 312
>gi|417537897|ref|ZP_12190645.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
gi|353667608|gb|EHD05081.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Wandsworth str. A4-580]
Length = 321
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 161/361 (44%), Gaps = 83/361 (22%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S ++
Sbjct: 188 FHDSAAAAHAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQTFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISK-------------LRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+T++V R NL L+S+ L + G V E QGQ +AW+F
Sbjct: 248 LWFTTLVSRGENLPPLVSRGENLPNLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTF 307
Query: 345 V 345
+
Sbjct: 308 M 308
>gi|238794111|ref|ZP_04637728.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
intermedia ATCC 29909]
gi|238726616|gb|EEQ18153.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
intermedia ATCC 29909]
Length = 346
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 160/361 (44%), Gaps = 76/361 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ D A + L R LL
Sbjct: 35 KEKSGLHPRNRHRSRY-DFDSLSVSCPELVPFLAPTAYGDISIDFADPLAVKMLNRALLK 93
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 94 HFYGIEYWDIPADFLCPPIPGRADYVHHLADLLASCNEGVIP----QGRNIALLDIGVGA 149
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + +++ + ++
Sbjct: 150 NCIYPIIGQREYGWRFTGTDIDPQALSAAKMVVSMNPTLKNTLRLKQQKDPQA------- 202
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ E++D +
Sbjct: 203 --------------------------------------------IFDGILAVNERYDATL 218
Query: 247 CNPPFFESM----------------EEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S E P + GG E+ C GGE F++R++ +S
Sbjct: 219 CNPPFHASAEEAAATTRRKLHKLGKSEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 278
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P ++
Sbjct: 279 ATKAQNCFWFTSLISKKTTLPAIYHALRYANAVEVRTIDMAQGQKVSRFVAWTFLTPEQQ 338
Query: 351 I 351
+
Sbjct: 339 V 339
>gi|425897691|ref|ZP_18874282.1| hypothetical protein Pchl3084_1045 [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397891529|gb|EJL08007.1| hypothetical protein Pchl3084_1045 [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 341
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 164/360 (45%), Gaps = 78/360 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPQLIKSTPELGAFVIINPYGKESIDFANPAAVRVFNRALLKA 85
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGAN 127
+G+ W IP LCP VP R++Y+H + DLL+ +IP G V+ DIG GAN
Sbjct: 86 FYGIAHWDIPADFLCPPVPGRADYVHCLADLLAERNEGVIP----RGAAVRVLDIGVGAN 141
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G W F+GSD+ AL A+ V++N +++ I +R+ N +
Sbjct: 142 CIYPLIGHCDYRWQFLGSDIDTTALAAAKAIVQAN-GLNKAIGLRQQTNRKQ-------- 192
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L+G++ E+FD +C
Sbjct: 193 -------------------------------------------ILLGLLESDERFDLTLC 209
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S+EEA P + GG E+ C GGE F+T++I +S
Sbjct: 210 NPPFHASLEEATRGSQRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEARFVTQLIGES 269
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ Q W++++V + SNL + + L+K G + E QGQ +AW+F A++
Sbjct: 270 AQVAQQVLWFSTLVSKASNLPAIQAALKKAGALESQVVEMSQGQKQSRFVAWTFKDKAQQ 329
>gi|149910506|ref|ZP_01899146.1| hypothetical protein PE36_05148 [Moritella sp. PE36]
gi|149806466|gb|EDM66438.1| hypothetical protein PE36_05148 [Moritella sp. PE36]
Length = 316
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 162/353 (45%), Gaps = 78/353 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N + + D L YP+ + F+ + G +D++D A L LL H +
Sbjct: 7 TLHPRNPH-QGRYDLTALVKTYPALKAFITQNPSGEETVDFSDDKAVICLNSALLAHFYQ 65
Query: 75 L-NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ NW IP G LCP +P R++YIH+I DLL+ + +PT G +VK DIGTGANCIY
Sbjct: 66 VPNWQIPTGYLCPPIPGRADYIHYIADLLAEMNNGEVPT----GKRVKALDIGTGANCIY 121
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P+LG GW FV +D+ VA + A V++NP +++ I+I + TP
Sbjct: 122 PILGHRSYGWGFVATDVDTVAAKTANVIVQANPGLNKAIKIV----LKKTP--------- 168
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
S+F GV++ +++ ICNPP
Sbjct: 169 ----------------------GSTFK----------------GVIKYNDKYAVTICNPP 190
Query: 251 FFESMEEAGLN------------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
F SM +A K + GG E+ C GGE F+ + ++S
Sbjct: 191 FHASMADAAAGTERKIKNLHKGKAAPTDTTKLNFGGQHSELWCEGGELRFVKDMAKESKD 250
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS++ + +++ L L+ +GV ++ QGQ LAWSF+
Sbjct: 251 FTAQVCWFTSLISKGEHIEELEQYLQGLGVKQIRVIPMSQGQKVSRILAWSFM 303
>gi|423134016|ref|ZP_17121663.1| hypothetical protein HMPREF9715_01438 [Myroides odoratimimus CIP
101113]
gi|371647529|gb|EHO13031.1| hypothetical protein HMPREF9715_01438 [Myroides odoratimimus CIP
101113]
Length = 302
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 162/357 (45%), Gaps = 75/357 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
+ ++ + +HP+NK+ ++ DF L + P F+ + G ID+ A L +
Sbjct: 2 KEAKKTQKKLHPRNKH-QDLYDFDKLKQVVPELATFIIKNPSGVDTIDFAKPEAVVLLNK 60
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDI 122
+L+ D+ + +W +P LCP +P R++YIH+I DLL+ + +PT G VK D+
Sbjct: 61 AILMKDYKMTYWEMPKTNLCPPIPGRADYIHYIADLLAEGNNGKVPT----GKGVKILDL 116
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GAN IYP++G + GW FVGS++ V+++ A V++NPH+ I IR+
Sbjct: 117 GIGANVIYPIIGVAEYGWEFVGSEVDVVSVKTASHIVENNPHLKSHISIRQ--------- 167
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+P+ + +L ++ + E F
Sbjct: 168 --------------------------QPTKRN----------------ILKNIIGEKEYF 185
Query: 243 DFCICNPPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRII 287
D ICNPPFF+S E P + G E+ C GGE AFIT I
Sbjct: 186 DVVICNPPFFKSRAEVLAKTTQKLRNLGKEVVGKPVQNFSGQNNELWCDGGELAFITNYI 245
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S K+ W+T++V K NLK L S L++ V+ QG LAW +
Sbjct: 246 YESKHFKRQAVWFTTLVSNKDNLKPLQSLLKRSETKEVRIINMEQGNKISRILAWRY 302
>gi|288550085|ref|ZP_06390909.1| putative methyltransferase YbiN [Enterobacter cancerogenus ATCC
35316]
gi|288316706|gb|EFC55644.1| putative methyltransferase YbiN [Enterobacter cancerogenus ATCC
35316]
Length = 284
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 147/326 (45%), Gaps = 74/326 (22%)
Query: 37 PSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYI 95
P + F+ + G P +++ D A + L + LL H +G+ W IP+G LCP VP R++Y+
Sbjct: 9 PELKTFIVQTPAGEPSVNFADPQAVKALNKALLAHFYGVTHWDIPEGFLCPPVPGRADYV 68
Query: 96 HWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152
H + DLL+ + ++P + DIGTGAN IYPL+GA GW F GS+ A
Sbjct: 69 HHLADLLADDCGGVVPA------QASVLDIGTGANLIYPLIGAHEYGWRFTGSETGAEAF 122
Query: 153 EWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSS 212
A+ + +NP +S + +R+ + +
Sbjct: 123 SSAQAIINANPGLSRAVRLRR-----------------------------------QKDA 147
Query: 213 SSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA-------------G 259
SS FN ++ EQ+D +CNPPF +S A
Sbjct: 148 SSIFN----------------SIIHKNEQYDATMCNPPFHDSAATARAGSERKRRNLGQA 191
Query: 260 LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319
+ + GG +E+ C GGE AFI R+I++S A + +W+T++V R NL L L
Sbjct: 192 QDAALNFGGQQQELWCEGGEVAFILRMIDESKAYGRQVKWFTTLVSRGDNLPPLYRALTD 251
Query: 320 VGVTIVKTTEFVQGQTCRWGLAWSFV 345
G V E QGQ +AWSF+
Sbjct: 252 AGAVKVVKKEMAQGQKQSRFIAWSFM 277
>gi|392544577|ref|ZP_10291714.1| 23S rRNA mA1618 methyltransferase [Pseudoalteromonas piscicida JCM
20779]
Length = 285
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 162/346 (46%), Gaps = 75/346 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+NK++ D L ++ P+ + F + DG ID+T+ +A + L + LL D+ +
Sbjct: 1 MHPRNKHNSGY-DLDKLMAIEPALKNFTYNRADGIKSIDFTNPDAVKLLNKALLKSDYDI 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IP LCP VP R++YIH ++DLL + +P DKV+G DIGTGAN IYP+LG
Sbjct: 60 QVWDIPAQFLCPPVPGRADYIHALKDLLDESNLP------DKVQGVDIGTGANLIYPILG 113
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ W FV SD+ +A++ A+ I+EL L K +Q
Sbjct: 114 SREYNWRFVASDINPLAVKCAKT-------IAEL----------------NRLPVKVMQ- 149
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ + F A YH F +CNPPF S
Sbjct: 150 --------------QKQPNHFFKTIIKANQFYH----------------FSMCNPPFHAS 179
Query: 255 MEEA---------GLN--PKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
+A LN P+ S GG +E+ C GGE+ FI +I +SV K+ W+T
Sbjct: 180 EADANKGTQRKWKNLNKAPQASLNFGGQAQELWCDGGEKRFILDMISESVTFKEQVYWFT 239
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347
S++ K N+K L +L++V VK E QG +AWSF P
Sbjct: 240 SLISNKDNVKPLKQQLKQVAAEQVKVIEMEQGNKTSRFIAWSFFKP 285
>gi|164424087|ref|XP_001728128.1| hypothetical protein NCU11362 [Neurospora crassa OR74A]
gi|157070367|gb|EDO65037.1| predicted protein [Neurospora crassa OR74A]
Length = 541
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 68/342 (19%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
+N Y+++P F L P F F+ D + ++D+ D A +LT+ LL D+GL
Sbjct: 97 RNLYTKDP-SFKYLGQKDPDFALFL----DSKNQLDFNDPAAVMQLTKTLLKIDYGLKID 151
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSS-----NIIPTTSRNG--DKVKGFDIGTGANCIYP 131
+P +LCP VPNR NYI W+ LLSS + P++++N + G DIGTGA+ IYP
Sbjct: 152 LPPDRLCPPVPNRHNYILWLSSLLSSSSYHPHFSPSSNQNNYSRPIIGLDIGTGASAIYP 211
Query: 132 LLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
LLG WSF+ +D+ +L +A++N+ N + + + + P LT +
Sbjct: 212 LLGCVQHPSWSFIATDIDAHSLSFAQRNIHLNNLQDRITLLHRTPDQPLIPFDSRILTTR 271
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ ++ DF +CNPP
Sbjct: 272 GI-----------------------------------------------DKIDFTMCNPP 284
Query: 251 FF-------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303
F+ S + P T+C G P EMVC+GGE A I ++I++S+ L+ WYTSM
Sbjct: 285 FYSSPADLLSSAAKKSRPPLTACTGAPVEMVCAGGEVAHIFKMIDESLVLRGKVTWYTSM 344
Query: 304 VGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
VG+ ++L+ ++ +LRK + TE VQG QT RW + WSF
Sbjct: 345 VGKVTSLETVVDRLRKENINNYAVTELVQGKQTKRWVVGWSF 386
>gi|423326792|ref|ZP_17304600.1| hypothetical protein HMPREF9711_00174 [Myroides odoratimimus CCUG
3837]
gi|404607362|gb|EKB06864.1| hypothetical protein HMPREF9711_00174 [Myroides odoratimimus CCUG
3837]
Length = 302
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 162/357 (45%), Gaps = 75/357 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
+ ++ + +HP+NK+ ++ DF L + P F+ + G ID+ A L +
Sbjct: 2 KEAKKTQKKLHPRNKH-QDLYDFDKLKQVVPELATFIIKNPSGVDTIDFAKPEAVVLLNK 60
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDI 122
+L+ D+ + +W +P LCP +P R++YIH+I DLL+ + +PT G VK D+
Sbjct: 61 AILMKDYKMTYWEMPKTNLCPPIPGRADYIHYIADLLAEGNNGKVPT----GKGVKILDL 116
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GAN IYP++G + GW FVGS++ V+++ A V++NPH+ I IR+
Sbjct: 117 GIGANVIYPIIGVAEYGWEFVGSEVDVVSVKTASHIVENNPHLKSHISIRQ--------- 167
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+P+ + +L ++ + E F
Sbjct: 168 --------------------------QPTKRN----------------ILKNIIGEKEYF 185
Query: 243 DFCICNPPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRII 287
D ICNPPFF+S E P + G E+ C GGE AFIT I
Sbjct: 186 DVVICNPPFFKSRAEVLAKTTQKLKNLGKEVVGKPVQNFSGQNNELWCDGGELAFITNYI 245
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S K+ W+T++V K NLK L S L++ V+ QG LAW +
Sbjct: 246 YESKHFKRQAVWFTTLVSNKDNLKPLQSLLKRSETKEVRIINMEQGNKISRILAWRY 302
>gi|424039715|ref|ZP_17778024.1| methyltransferase small domain protein [Vibrio cholerae HENC-02]
gi|408892674|gb|EKM30104.1| methyltransferase small domain protein [Vibrio cholerae HENC-02]
Length = 388
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 87/357 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P + FV + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 78 DFKKLIAAEPQLKSFVIKNPKGEDSINFSDPKAVKMLNKALLAAHYDIEYWDIPDTYLCP 137
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL S + + + KV+ D+G GANCIYP++G + GW + GSD
Sbjct: 138 PIPGRADYVHRVAELLDSEVKGKYAHH--KVRALDVGVGANCIYPIVGVTQYGWHYTGSD 195
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A + N ++ IE+ +Q++ ESN
Sbjct: 196 VDATSIESARAITERNASLNGKIEL-----------VQQT-------SESN--------- 228
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G+++ +++D CNPPF S EEA +
Sbjct: 229 ------------------------IYRGIIQPNDRYDITTCNPPFHRSAEEAAMGSQRKL 264
Query: 261 ---------------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
P + GG E+ C GGE AFI ++ +S A
Sbjct: 265 DNLKANQRKKGVKVQANQAKTPQVKANKPALNFGGQNAELWCEGGEAAFIRKMANESQAF 324
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++ +++
Sbjct: 325 SAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRIVEMSQGQKVSRFIAWSYMDKSQR 381
>gi|444424311|ref|ZP_21219769.1| 23S rRNA mA1618 methyltransferase [Vibrio campbellii CAIM 519 =
NBRC 15631]
gi|444242306|gb|ELU53820.1| 23S rRNA mA1618 methyltransferase [Vibrio campbellii CAIM 519 =
NBRC 15631]
Length = 388
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 87/357 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P + FV + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 78 DFKKLIAAEPQLKSFVIKNPKGEDSINFSDPKAVKMLNKALLAAHYDIEYWDIPDTYLCP 137
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL + + + KV+ D+G GANCIYP++G + GW + GSD
Sbjct: 138 PIPGRADYVHRVAELLDGEVKGKYAHH--KVRALDVGVGANCIYPIVGVTQYGWHYTGSD 195
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A + N ++ IE+R+ SES
Sbjct: 196 VDPKSIESARAITERNASLNGKIELRQ-QTSESN-------------------------- 228
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G++ +++D CNPPF S EEA +
Sbjct: 229 ------------------------IYRGIIEPNDRYDITTCNPPFHRSAEEAAMGSQRKL 264
Query: 261 ---------------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
P + GG E+ C GGE AFI ++ +S A
Sbjct: 265 DNLKANQRKKGVKVQAHQAKTPQVKANKPALNFGGQNAELWCEGGEAAFIRKMANESQAF 324
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++ A++
Sbjct: 325 SAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRIVEMSQGQKVSRFMAWSYMDKAQR 381
>gi|421782448|ref|ZP_16218904.1| ribosomal RNA large subunit methyltransferase F [Serratia
plymuthica A30]
gi|407755470|gb|EKF65597.1| ribosomal RNA large subunit methyltransferase F [Serratia
plymuthica A30]
Length = 321
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 166/358 (46%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ EPFV + G +D+ D A +
Sbjct: 2 EKKKTFPQQKSGLHPRNRHRSRY-DFPALIASCPALEPFVKPNAWGDISVDFADPAAVKM 60
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 61 LNRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKGVAILDV 119
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+L A+ V+ N + + +R
Sbjct: 120 GIGANCIYPIVGLREYGWRFTGSEIDPVSLNSAKMIVEMNSTLRNSVRLR---------- 169
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + ++G ++GV E+F
Sbjct: 170 ---------LQKQPEFILNG-----------------------------IIGV---AEKF 188
Query: 243 DFCICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA P + GG E+ C GGE AF+ ++
Sbjct: 189 DATLCNPPFHGSEQEARASTRLKLHKLGKGEVADKPIQNFGGKNNELWCEGGEEAFVRKM 248
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+E+SV Q W+TS++ + + L + L+ G V+T E QGQ +AW+F
Sbjct: 249 VEESVGKAQNCLWFTSLISKNTTLPSIYHALKLAGAVEVRTIEMAQGQKISRFVAWTF 306
>gi|378767967|ref|YP_005196437.1| rRNA (adenine-N(6)-)-methyltransferase [Pantoea ananatis LMG 5342]
gi|365187450|emb|CCF10400.1| rRNA (adenine-N(6)-)-methyltransferase [Pantoea ananatis LMG 5342]
Length = 328
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 161/359 (44%), Gaps = 76/359 (21%)
Query: 9 RREERPTI-HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
++ P++ H +N++ + DFA L + +P V + G +D+ D A L +
Sbjct: 23 KKSASPSLFHARNRH-QGEYDFAALTAAHPPLAAKVRPNGYGVMSVDFADPEAVMLLNQA 81
Query: 68 LLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGT 124
LL +GL+W + G LCP VP R++Y+H++ DLL+ +P+ DIG
Sbjct: 82 LLKLFYGLDWQLAPGSLCPPVPGRADYLHYLADLLALDNQGRVPSADV-------LDIGC 134
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GANCIYPL+GA+ GW F G+++ D AL+ A K V +N +S LI +R+ N +
Sbjct: 135 GANCIYPLIGAAEYGWRFTGTEIDDAALKAAGKIVAANAGMSRLIRLRRQKNPQV----- 189
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
VL GVV F
Sbjct: 190 ----------------------------------------------VLNGVVNKDAFFHA 203
Query: 245 CICNPPFFESM-----------EEAGLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSV 291
ICNPPF S GL + GG E+ C GGE+AF+ ++I +S
Sbjct: 204 VICNPPFHASAAEAAAGSQRKSRNLGLQQSAPLNFGGQHNELWCEGGEKAFVGKMIAESA 263
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
L W+TS+V RK +L L +L+ + +V+ QG+ LAWSF+ A++
Sbjct: 264 GLASQVVWFTSLVSRKEHLPALEKQLQALDTAVVRVVNMAQGKKQSRFLAWSFMSAAQR 322
>gi|373110555|ref|ZP_09524824.1| hypothetical protein HMPREF9712_02417 [Myroides odoratimimus CCUG
10230]
gi|371643197|gb|EHO08755.1| hypothetical protein HMPREF9712_02417 [Myroides odoratimimus CCUG
10230]
Length = 302
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 161/357 (45%), Gaps = 75/357 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
+ ++ + +HP+NK+ ++ DF L + P F+ + G ID+ A L +
Sbjct: 2 KEAKKTQKKLHPRNKH-QDLYDFDKLKQVVPELATFIIKNPSGVDTIDFAKPEAVVLLNK 60
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDI 122
+L+ D+ + +W +P LCP +P R++YIH+I DLL+ + +PT G VK D+
Sbjct: 61 AILMKDYKMTYWEMPKTNLCPPIPGRADYIHYIADLLAEGNNGKVPT----GKGVKILDL 116
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GAN IYP++G + GW FVGS++ V+++ A V+ NPH+ I IR+
Sbjct: 117 GIGANVIYPIIGVAEYGWEFVGSEVDVVSVKTASHIVEHNPHLKSHISIRQ--------- 167
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+P+ + +L ++ + E F
Sbjct: 168 --------------------------QPTKRN----------------ILKNIIGEKEYF 185
Query: 243 DFCICNPPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRII 287
D ICNPPFF+S E P + G E+ C GGE AFIT I
Sbjct: 186 DVVICNPPFFKSRAEVLAKTTQKLRNLGKEVVGKPVQNFSGQNNELWCDGGELAFITNYI 245
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S K+ W+T++V K NLK L S L++ V+ QG LAW +
Sbjct: 246 YESKHFKRQAVWFTTLVSNKDNLKPLQSLLKRSETKEVRIINMEQGNKISRILAWRY 302
>gi|331005963|ref|ZP_08329308.1| A/G-specific adenine glycosylase MutY [gamma proteobacterium
IMCC1989]
gi|330420208|gb|EGG94529.1| A/G-specific adenine glycosylase MutY [gamma proteobacterium
IMCC1989]
Length = 317
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 161/369 (43%), Gaps = 76/369 (20%)
Query: 1 MGSKKRRRRREERPT---IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTD 57
M + +R ++ + P +HP+N + + DF L YP P+V + +D+ D
Sbjct: 1 MSTHQRNKKSKTDPNSKNLHPRNLHVQ-AYDFPSLIKSYPPLAPYVTTNAHNTLSVDFAD 59
Query: 58 FNATRELTRVLLLHD-HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN-GD 115
A + L LL H H NW IP+G LCP +P R++YIH+I +LL + PT ++
Sbjct: 60 SLAVKALNTALLKHHYHIANWDIPEGALCPPIPGRADYIHYIAELLGVSEPPTNVKSIKP 119
Query: 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175
+ DIG GAN IY LL + GW VGSD+ +LE + SNP + +++R
Sbjct: 120 TINLLDIGIGANGIYSLLACQIYGWQCVGSDINTHSLENVAAIIASNPTLKGDVKLR--- 176
Query: 176 NSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGV 235
Q+ H + G+
Sbjct: 177 ----------------------------------------------TQTDKHH--IFDGI 188
Query: 236 VRDGEQFDFCICNPPFFESMEEA-------------------GLNPKTSCGGTPEEMVCS 276
++ GE FD +CNPPF S +EA K + GG E+ C
Sbjct: 189 IQTGEYFDVSVCNPPFHASSDEALKSNQRKISNLSHHSNEQKSTAAKLNFGGLDAELWCK 248
Query: 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTC 336
GGER F+ ++I++S RW+TS+V + N+K + K+G + ++ E QG
Sbjct: 249 GGERLFLKKLIKESQMFSTQCRWFTSLVSKIDNVKPAKKLITKLGASDIREIEMKQGNKI 308
Query: 337 RWGLAWSFV 345
LAW+F+
Sbjct: 309 TRILAWTFM 317
>gi|188534338|ref|YP_001908135.1| SAM-dependent methyltransferase [Erwinia tasmaniensis Et1/99]
gi|188029380|emb|CAO97257.1| Conserved hypothetical protein (DUF890) [Erwinia tasmaniensis
Et1/99]
Length = 309
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 163/348 (46%), Gaps = 69/348 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N++ DFA L + +P PFV + G ID+ + +A + L + LL H
Sbjct: 6 EKTVLHPRNRH-RGRYDFAALIASHPPLAPFVAVNNWGSESIDFANPDAVKALNQALLHH 64
Query: 72 -DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
H +W IP+G LCP VP R++YIH + DLL+ + R ++ D+G GAN IY
Sbjct: 65 FYHIAHWDIPEGFLCPPVPGRADYIHHLADLLAEDNRRVVPR---EINVLDVGCGANLIY 121
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F GS++ + A+ A + NP ++ I +R+ +S++
Sbjct: 122 PLIGHSEYQWRFTGSEVNERAMAAANAIIAGNPGLNRAIRLRRQKDSQA----------- 170
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ GV+ E + +CNPP
Sbjct: 171 ----------------------------------------IFSGVIHKNELYQATLCNPP 190
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S +A GL+ + + GG +E+ C GGE AF+ R+I +SV+ +
Sbjct: 191 FHASAADAHQGSQRKLRNLGLDRHSPLNFGGQQDELWCEGGEIAFMRRMIAESVSFGRQC 250
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V RK NL L L + V ++T + QGQ +AWSF+
Sbjct: 251 IWFTSLVSRKENLPELWRALEEADVAAMRTIDMAQGQKQSRFIAWSFM 298
>gi|423200448|ref|ZP_17187028.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
AER39]
gi|404619856|gb|EKB16760.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
AER39]
Length = 323
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 150/353 (42%), Gaps = 75/353 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ + +H +N++ DF L P VF + G ID+ + +A + L R LL
Sbjct: 15 DRKSGLHSRNRHQAGY-DFEALCLRTPELAAHVFINDYGTRTIDFANPDAVKTLNRALLA 73
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGAN 127
H +G+ W +P G LCP +P R +Y+HW DLL S+ +PT G V+ DIG GAN
Sbjct: 74 HHYGIAHWDLPAGYLCPPIPGRVDYLHWAADLLAESAGQLPT----GKGVRVLDIGVGAN 129
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLG GW FVGSD+ V+++ A KSN + IE R N
Sbjct: 130 CIYPLLGCREYGWRFVGSDIDPVSVKAATLLAKSN-GLGNQIECRLQGNPNH-------- 180
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
V G++ E+F +C
Sbjct: 181 -------------------------------------------VFRGIIGPKERFALTLC 197
Query: 248 NPPFFESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S+EEA P + GG E+ C GGE AF+ +I S
Sbjct: 198 NPPFHASLEEASKGTERKLRNLGKEVTGAPVLNFGGQKAELWCEGGEAAFLANMIAQSKE 257
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++S+V +K NL L +VG V+ + QG LAWSF+
Sbjct: 258 FATQCLWFSSLVSKKENLPGAKKALSRVGARQVRVIDMAQGNKVSRILAWSFL 310
>gi|386820166|ref|ZP_10107382.1| putative SAM-dependent methyltransferase [Joostella marina DSM
19592]
gi|386425272|gb|EIJ39102.1| putative SAM-dependent methyltransferase [Joostella marina DSM
19592]
Length = 315
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 161/351 (45%), Gaps = 70/351 (19%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+++ +HP+NK + N + L PS ++ ++ G P ID+++ A + L + LL
Sbjct: 6 DKKSKLHPRNK-NRNLYNLESLIQCKPSLANYIKPNKAGNPSIDFSNPEAVKILNKALLH 64
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCI 129
H +G+ +W PD LCP +P R +Y+H+I DLL N S+N + DIG GA+CI
Sbjct: 65 HYYGVEYWEFPDANLCPPIPGRVDYLHYIADLLRVNNSGEISKNN--ITCLDIGMGASCI 122
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
YP+LG + W+F+GSD+ + ++ A+ + SNP + IE R +N
Sbjct: 123 YPILGVTEYDWNFIGSDIAEKSIANAKNIIASNPQLKGKIECRLQNN------------- 169
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
P+ + G++ E+ D I NP
Sbjct: 170 --------------------PTQ------------------IFKGIITTNEKIDVTISNP 191
Query: 250 PFFESMEEA---------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
PF S E+A NP + G E++ GGE AFI +I++S+ +
Sbjct: 192 PFHASKEDALKGTRRKIKNLSGKKEKNPDLNFAGISNELIYKGGEFAFIGNMIKESMMFQ 251
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V ++SNLK + L K V KT + G +AW+F+
Sbjct: 252 NNCLWFTTLVSKESNLKGIYKLLDKAKVAEFKTIKMGTGNKTSRIVAWTFL 302
>gi|388601203|ref|ZP_10159599.1| 23S rRNA mA1618 methyltransferase [Vibrio campbellii DS40M4]
Length = 388
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 156/357 (43%), Gaps = 87/357 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P + FV + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 78 DFKKLIAAEPQLKSFVIKNPKGEDSINFSDPKAVKMLNKALLAAHYDIEYWDIPDTYLCP 137
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL + + + K + D+G GANCIYP++G + GW + GSD
Sbjct: 138 PIPGRADYVHRVAELLDGEVKGKYAHH--KARALDVGVGANCIYPIVGVTQYGWYYTGSD 195
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A ++ N ++ IE+R+ SES
Sbjct: 196 VDPKSIESARAIIERNASLNGKIELRQ-QTSESN-------------------------- 228
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G+++ +++D CNPPF S EEA +
Sbjct: 229 ------------------------IYRGIIQPNDRYDITTCNPPFHRSAEEAAMGSQRKL 264
Query: 261 ---------------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
P + GG E+ C GGE AFI ++ +S A
Sbjct: 265 DNLKANQRKKGVKVQAHQAKTPQVKANKPALNFGGQNAELWCEGGEAAFIRKMANESQAF 324
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++ A++
Sbjct: 325 SAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRIVEMSQGQKVSRFMAWSYMDKAQR 381
>gi|424031619|ref|ZP_17771053.1| methyltransferase small domain protein [Vibrio cholerae HENC-01]
gi|408877340|gb|EKM16406.1| methyltransferase small domain protein [Vibrio cholerae HENC-01]
Length = 391
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 87/357 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P + FV + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 81 DFKKLITAEPQLKSFVIKNPKGEDSINFSDPKAVKMLNKALLAAHYDIEYWDIPDTYLCP 140
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL S + + + KV+ D+G GANCIYP++G + GW + GSD
Sbjct: 141 PIPGRADYVHRVAELLDSEVKGKYAHH--KVRALDVGVGANCIYPIVGVTQYGWHYTGSD 198
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A + N ++ IE+ +Q++ ESN
Sbjct: 199 VDATSIESARAITERNASLNGKIEL-----------VQQT-------SESN--------- 231
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G+++ +++D CNPPF S EEA +
Sbjct: 232 ------------------------IYRGIIQPNDRYDITTCNPPFHRSAEEAAMGSQRKL 267
Query: 261 ---------------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
P + GG E+ C GGE AFI ++ +S A
Sbjct: 268 DNLKANQRKKGVKVQANQAKTPQVKANKPALNFGGQNAELWCEGGEAAFIRKMANESQAF 327
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++ +++
Sbjct: 328 SAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRIVEMSQGQKVSRFIAWSYMDKSQR 384
>gi|194882895|ref|XP_001975545.1| GG20499 [Drosophila erecta]
gi|190658732|gb|EDV55945.1| GG20499 [Drosophila erecta]
Length = 305
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 160/340 (47%), Gaps = 68/340 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N PD+ +A Y F +G+ +++ + RELT++LL + L
Sbjct: 13 MHPRN-VLRTQPDYTKMAIKYKDFRAQCQLELNGKVSVNFRNEKTLRELTKMLLKEYYDL 71
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ G L PT+ R NYI W+EDL+ N ++G DIG G++CIY LLGA
Sbjct: 72 DVDFAPGSLVPTLALRLNYILWLEDLMEP-------LNLQDIRGIDIGCGSSCIYSLLGA 124
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW + + +E+A +NVK N + LIE+ + D+
Sbjct: 125 KKNGWHMLALESKPQNIEYAIENVKKN-RLESLIEVY------------------AQADK 165
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
+N+ G+ +++ S + FC+CNPPFF+S
Sbjct: 166 TNI-FKGYFEQDQRMSV-----------------------------YQFCLCNPPFFDSN 195
Query: 256 -----------EEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
E P + G+ EE+ C GGE F+ RII++S+ K+ R +T+M+
Sbjct: 196 LPNPFGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDESLEHKERVRIFTTML 255
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
G K+N+ ++ L+K+ V V TTEF QG T RW +AWSF
Sbjct: 256 GVKANVPRILDYLKKLQVANVTTTEFHQGHTTRWAVAWSF 295
>gi|375131139|ref|YP_004993239.1| SAM-dependent methyltransferase [Vibrio furnissii NCTC 11218]
gi|315180313|gb|ADT87227.1| hypothetical SAM-dependent methyltransferase [Vibrio furnissii NCTC
11218]
Length = 365
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 155/359 (43%), Gaps = 85/359 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ N DF L P E + + G I ++D A + L + LL H +G+
Sbjct: 48 LHPRNQHKGNY-DFPALCKAVPELERHLIKNPKGEWSIPFSDPVAVKLLNKALLAHHYGV 106
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W +P G LCP +P R++YIH + DLL+ P + +VK DIG GANCIYP++G
Sbjct: 107 TFWDLPAGYLCPPIPGRADYIHRVADLLAEEC-PALVHH--RVKALDIGVGANCIYPIVG 163
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW + GSD+ ++++ A + N + IE R NS++
Sbjct: 164 VTEYGWHYTGSDVDPISVKQANLIAQGNAVLKGRIECRLQKNSKA--------------- 208
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GV+ E++D CNPPF S
Sbjct: 209 ------------------------------------IFSGVIGKDERYDVTTCNPPFHAS 232
Query: 255 MEEA-----------------------------GLNPKTSCGGTPEEMVCSGGERAFITR 285
+ EA P + GG E+ C GGE AF+
Sbjct: 233 LAEAQQGTERKIRNLRDNQRKKGVAQEVSAKASAHAPTLNFGGQKAELWCPGGEAAFVKT 292
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ +S Q W+T+++ + N+++L +L KVGV +K E QGQ +AW+F
Sbjct: 293 MAVESKLFAQQVLWFTTLISKSDNVRWLKKQLEKVGVQSIKVVEMQQGQKVSRFVAWTF 351
>gi|416421874|ref|ZP_11689778.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|416431391|ref|ZP_11695545.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|416441629|ref|ZP_11701841.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|416445405|ref|ZP_11704294.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|416454123|ref|ZP_11710126.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|416459335|ref|ZP_11713844.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|416467283|ref|ZP_11717300.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|416481038|ref|ZP_11723094.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416493768|ref|ZP_11727967.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|416500441|ref|ZP_11731512.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416546388|ref|ZP_11753874.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|416578489|ref|ZP_11770609.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|416582427|ref|ZP_11772701.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|416593738|ref|ZP_11780144.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|416599465|ref|ZP_11783699.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|416604967|ref|ZP_11786588.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|416612615|ref|ZP_11791640.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|416620702|ref|ZP_11795891.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|416629577|ref|ZP_11800201.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|416643581|ref|ZP_11806079.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|416650098|ref|ZP_11810206.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416654178|ref|ZP_11812142.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|416669870|ref|ZP_11819713.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|416679937|ref|ZP_11823194.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|416690482|ref|ZP_11825901.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|416707548|ref|ZP_11832646.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|416714846|ref|ZP_11838164.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|416716624|ref|ZP_11838971.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|416724874|ref|ZP_11845258.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|416730346|ref|ZP_11848597.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416740509|ref|ZP_11854465.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416746035|ref|ZP_11857648.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416756562|ref|ZP_11862648.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|416760830|ref|ZP_11865038.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416767463|ref|ZP_11869936.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418483714|ref|ZP_13052720.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|418491693|ref|ZP_13058201.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418494013|ref|ZP_13060473.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418500030|ref|ZP_13066429.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418501852|ref|ZP_13068228.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418509669|ref|ZP_13075961.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418526690|ref|ZP_13092659.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|322616301|gb|EFY13210.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322619551|gb|EFY16426.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322622753|gb|EFY19598.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322628665|gb|EFY25452.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322631602|gb|EFY28358.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322637129|gb|EFY33832.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322641671|gb|EFY38307.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322644534|gb|EFY41074.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322648468|gb|EFY44920.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322654203|gb|EFY50526.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658118|gb|EFY54385.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322663592|gb|EFY59794.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322670328|gb|EFY66468.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322671564|gb|EFY67686.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322676920|gb|EFY72987.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322682845|gb|EFY78864.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322686524|gb|EFY82506.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323194579|gb|EFZ79772.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323199090|gb|EFZ84186.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323202045|gb|EFZ87104.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323213914|gb|EFZ98684.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323215234|gb|EFZ99979.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323220847|gb|EGA05285.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323227294|gb|EGA11462.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323229912|gb|EGA14035.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323233137|gb|EGA17233.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323240872|gb|EGA24914.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323243189|gb|EGA27209.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323248728|gb|EGA32656.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251732|gb|EGA35599.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257544|gb|EGA41232.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323261453|gb|EGA45034.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323267884|gb|EGA51363.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272049|gb|EGA55464.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|366060258|gb|EHN24522.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366060689|gb|EHN24949.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|366063260|gb|EHN27480.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366069497|gb|EHN33620.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366076299|gb|EHN40337.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366077764|gb|EHN41773.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366828281|gb|EHN55168.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372205298|gb|EHP18813.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
Length = 308
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 157/348 (45%), Gaps = 70/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ ++ D A L F+ + G +D+ + A + L + LL H
Sbjct: 4 QKSGLHPRNRH-QHRYDLAALCQTTSELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S + ++
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQV 247
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 248 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 295
>gi|359437881|ref|ZP_09227930.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20311]
gi|358027368|dbj|GAA64179.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20311]
Length = 310
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 165/360 (45%), Gaps = 76/360 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N++ +N DF LL S PS F+ + G ID+++ A + L +
Sbjct: 2 KAKSTRSKLHPRNQH-KNGYDFNLLTSQTPSLTAFLITTPAGNQSIDFSNNLAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +N+W IP+ LCP +P R +YIH++ DLLS + IIPT G ++K DIG
Sbjct: 61 LLKSHYNINFWDIPEHNLCPPIPGRVDYIHYLADLLSEDNQQIIPT----GRQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN +YPL G S W F GSD+ A++ A++ + N + I +++ N E
Sbjct: 117 TGANLVYPLTGNSEYQWHFTGSDIDSAAIKIAKQLAQFN---NLKITLKQQKNPEHI--- 170
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
F A+ YH
Sbjct: 171 --------------------------------FKGVVNAKDLYH---------------- 182
Query: 244 FCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDS 290
+CNPPF S EEA G P + GG E+ C GGE AFI+ +I++S
Sbjct: 183 LTMCNPPFHASAEEANKGSERKWKNLGKTPSQALNFGGQSNELWCEGGELAFISNMIKES 242
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V +K L L ++L++ ++ K E QGQ +AWS+ A +
Sbjct: 243 RDHSDQVIWFTSLVSKKETLAALEAQLKQQPISEFKIVEMAQGQKVSRFIAWSYFDKATR 302
>gi|422619151|ref|ZP_16687843.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
pv. japonica str. M301072]
gi|330899523|gb|EGH30942.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
pv. japonica str. M301072]
Length = 259
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 148/312 (47%), Gaps = 77/312 (24%)
Query: 60 ATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGD 115
A R R LL +G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G
Sbjct: 1 AVRVFNRALLKAFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGA 56
Query: 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175
+K DIGTGANCIYPLLG S GW FVGSD+ A+ A VK+N +S+ I +R+
Sbjct: 57 SIKALDIGTGANCIYPLLGHSDYGWQFVGSDIDSTAIAAATTIVKAN-GLSKAISVRQQG 115
Query: 176 NSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGV 235
N + +L+G+
Sbjct: 116 NRKQ---------------------------------------------------ILLGL 124
Query: 236 VRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGG 278
+ E+F +CNPPF S+EEA P + GG +E+ C GG
Sbjct: 125 LDSSERFHVSLCNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQELWCDGG 184
Query: 279 ERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRW 338
E F+T++I++S L W++++V + SNL + S L+K GV VK E QGQ
Sbjct: 185 EIGFVTQLIQESALLPSQVAWFSTLVSKASNLPPIQSALKKAGVLEVKVVEMGQGQKQSR 244
Query: 339 GLAWSFVPPARK 350
+AW+F+ A++
Sbjct: 245 FVAWTFLDKAQR 256
>gi|260768603|ref|ZP_05877537.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
furnissii CIP 102972]
gi|260616633|gb|EEX41818.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
furnissii CIP 102972]
Length = 365
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 155/359 (43%), Gaps = 85/359 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ N DF L P E + + G I ++D A + L + LL H +G+
Sbjct: 48 LHPRNQHKGNY-DFPALCKALPELERHLIKNPKGEWSIPFSDPVAVKLLNKALLAHHYGV 106
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W +P G LCP +P R++YIH + DLL+ P + +VK DIG GANCIYP++G
Sbjct: 107 TFWDLPAGYLCPPIPGRADYIHRVADLLAEEC-PALVHH--RVKALDIGVGANCIYPIVG 163
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW + GSD+ ++++ A + N + IE R NS++
Sbjct: 164 VTEYGWHYTGSDVDPISVKQANLIAQGNAVLKGRIECRLQKNSKA--------------- 208
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GV+ E++D CNPPF S
Sbjct: 209 ------------------------------------IFSGVIGKDERYDVTTCNPPFHAS 232
Query: 255 MEEA-----------------------------GLNPKTSCGGTPEEMVCSGGERAFITR 285
+ EA P + GG E+ C GGE AF+
Sbjct: 233 LAEAQQGTERKIRNLRDNQRKKGVAQEVSAKASAHAPTLNFGGQKAELWCPGGEAAFVKT 292
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ +S Q W+T+++ + N+++L +L KVGV +K E QGQ +AW+F
Sbjct: 293 MAVESKLFAQQVLWFTTLISKSDNVRWLKKQLEKVGVQSIKVIEMQQGQKVSRFVAWTF 351
>gi|421354326|ref|ZP_15804658.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE-45]
gi|395953451|gb|EJH64064.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE-45]
Length = 362
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 162/358 (45%), Gaps = 87/358 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ P DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGPYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLTLHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLL---SSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+W IP+G LCP +P R++YIH + DLL + + P+ +V DIG GANCIYP
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKDNPKLAPS------QVTALDIGVGANCIYP 161
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G + GWS+VGSD+ V+++ A V+SN
Sbjct: 162 IVGVTEYGWSWVGSDIDPVSIQQASLIVQSN----------------------------- 192
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ GH++ + +S FN G++ E++ CNPPF
Sbjct: 193 ------SKLQGHIECRLQKNSQHIFN----------------GIIGANERYTVTTCNPPF 230
Query: 252 FESMEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRI 286
S+ +A +P+ + GG E+ C GGE AFI ++
Sbjct: 231 HASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGGQKAELWCPGGEAAFIGKM 290
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 291 AVESQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|421726003|ref|ZP_16165182.1| 23S rRNA mA1618 methyltransferase [Klebsiella oxytoca M5al]
gi|410373213|gb|EKP27915.1| 23S rRNA mA1618 methyltransferase [Klebsiella oxytoca M5al]
Length = 304
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 165/357 (46%), Gaps = 74/357 (20%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + F+ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHQQRY-DLPALCQAHPELQGFITLNPVGEQTIDFANPLAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGA 126
H + + W IPDG LCP VP R++Y+H + DLL+ S IIP + DIG GA
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYLHHLADLLALDSGIIPANASI------LDIGVGA 114
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+G GW F GS++ A A+ V NP ++ I +R+ ++++
Sbjct: 115 NCIYPLIGVHEYGWRFTGSEVNADAFASAQAIVNGNPGLTRQIRLRRQKDAKA------- 167
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L G++ E +D +
Sbjct: 168 --------------------------------------------ILTGIIHKNETYDATL 183
Query: 247 CNPPFFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVAL 293
CNPPF +S A GL ++ + GG +E+ C GGE AFIT++I++S
Sbjct: 184 CNPPFHDSAASAQAGGERKRRNLGLGEESVLNFGGQQQELWCEGGEVAFITQMIQESQQF 243
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ +W+TS+V R NL L L VG V E QG +AW+F+ A++
Sbjct: 244 GRQVKWFTSLVSRGDNLPPLYRALTDVGAVKVVKKEMAQGNKQSRFIAWTFMDEAKR 300
>gi|423130331|ref|ZP_17118006.1| hypothetical protein HMPREF9714_01406 [Myroides odoratimimus CCUG
12901]
gi|371645453|gb|EHO10977.1| hypothetical protein HMPREF9714_01406 [Myroides odoratimimus CCUG
12901]
Length = 302
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 161/357 (45%), Gaps = 75/357 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
+ ++ + +HP+NK+ ++ DF L P F+ + G ID+ A L +
Sbjct: 2 KEAKKTQKKLHPRNKH-QDLYDFDKLKQAVPELATFIIKNPSGVDTIDFAKPEAVVLLNK 60
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDI 122
+L+ D+ + +W +P LCP +P R++YIH+I DLL+ + +PT G VK D+
Sbjct: 61 AILMKDYKMTYWEMPKTNLCPPIPGRADYIHYIADLLAEGNNGKVPT----GKGVKILDL 116
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GAN IYP++G + GW FVGS++ V+++ A V++NPH+ I IR+
Sbjct: 117 GIGANVIYPIIGVAEYGWEFVGSEVDVVSVKTASHIVENNPHLKSHISIRQ--------- 167
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+P+ + +L ++ + E F
Sbjct: 168 --------------------------QPTKRN----------------ILKNIIGEKEYF 185
Query: 243 DFCICNPPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRII 287
D ICNPPFF+S E P + G E+ C GGE AFIT I
Sbjct: 186 DVVICNPPFFKSRAEVLAKTTQKLKNLGKEVVGKPVQNFSGQNNELWCDGGELAFITNYI 245
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S K+ W+T++V K NLK L S L++ V+ QG LAW +
Sbjct: 246 YESKHFKRQAVWFTTLVSNKDNLKPLQSLLKRSETKEVRIINMEQGNKISRILAWRY 302
>gi|259908987|ref|YP_002649343.1| SAM-dependent methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|387871910|ref|YP_005803285.1| hypothetical protein EPYR_02534 [Erwinia pyrifoliae DSM 12163]
gi|224964609|emb|CAX56123.1| Ribosomal RNA large subunit methyltransferase F [Erwinia pyrifoliae
Ep1/96]
gi|283478998|emb|CAY74914.1| UPF0049 protein ybiN [Erwinia pyrifoliae DSM 12163]
Length = 309
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 161/348 (46%), Gaps = 69/348 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N++ DFA L + +P PFV + G ID+ + +A + L + LL H
Sbjct: 6 EKNVLHPRNRH-RGRYDFAALIASHPPLAPFVAVNHWGSESIDFANPDAVKALNQALLHH 64
Query: 72 -DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
H +W IP G LCP VP R++YIH + DLL+ + R ++ D+G GAN IY
Sbjct: 65 FYHIAHWDIPAGFLCPPVPGRADYIHHLADLLAEDNRRVVPR---EINVLDVGCGANLIY 121
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F GS++ + A+ A + NP ++ I +R+ + ++
Sbjct: 122 PLIGHSEYQWRFTGSEVNERAMAAANAIIAGNPRLNRAIRLRRQKDGQA----------- 170
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ GV+ E + +CNPP
Sbjct: 171 ----------------------------------------MFSGVIHKNELYHATLCNPP 190
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F + +A GL+ + + GG EE+ C GGE AFI R+IE+S++ +
Sbjct: 191 FHATAVDAHQGSQRKLRNLGLDRHSPLTFGGQQEELWCEGGEIAFIRRMIEESISFGRQC 250
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V RK NL L L + V +T + QGQ +AWSF+
Sbjct: 251 VWFTSLVSRKENLPELWRALEEADVAATRTIDMAQGQKQSRFIAWSFM 298
>gi|408483613|ref|ZP_11189832.1| 23S rRNA mA1618 methyltransferase [Pseudomonas sp. R81]
Length = 338
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 162/348 (46%), Gaps = 72/348 (20%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N+++ DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRHTGRY-DFPALIKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKAFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+YPL+
Sbjct: 89 IQHWDIPADYLCPPVPGRADYVHFLADLLASTNDGKIPR-GSIVKVLDIGMGANCVYPLI 147
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G W+F+GS++ +A+ A V+SN +S++I++R+ N +
Sbjct: 148 GYMEYRWNFLGSEVDPIAVAAARAIVQSN-DLSKVIQLRQQTNPKQ-------------- 192
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+L+G++ GE+FD +CNPPF
Sbjct: 193 -------------------------------------ILLGLLEPGERFDLTMCNPPFHA 215
Query: 254 SMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
SM+EA P + GG E+ C GGE F+T++I +S
Sbjct: 216 SMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHFAHK 275
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 276 VLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|424045559|ref|ZP_17783124.1| methyltransferase small domain protein [Vibrio cholerae HENC-03]
gi|408886261|gb|EKM24939.1| methyltransferase small domain protein [Vibrio cholerae HENC-03]
Length = 388
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 87/357 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P + FV + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 78 DFKKLITAEPQLKSFVIKNPKGEDSINFSDPKAVKMLNKALLAAHYDIEYWDIPDTYLCP 137
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL + + + KV+ D+G GANCIYP++G S GW + GSD
Sbjct: 138 PIPGRADYVHRVAELLDGEVKGKYAHH--KVRALDVGVGANCIYPIVGVSQYGWHYTGSD 195
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A + N ++ IE+ +Q++ ESN
Sbjct: 196 VDPTSIESARAITERNASLNGKIEL-----------VQQT-------SESN--------- 228
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G+++ +++D CNPPF S EEA +
Sbjct: 229 ------------------------IYRGIIQPNDRYDITTCNPPFHRSAEEAAMGSQRKL 264
Query: 261 ---------------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
P + GG E+ C GGE AFI ++ +S A
Sbjct: 265 DNLKANQRKKGVKVQANQAKTPQVKANKPALNFGGQNAELWCEGGEAAFIRKMANESQAF 324
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++ +++
Sbjct: 325 SAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRIVEMSQGQKISRFIAWSYMDKSQR 381
>gi|359444374|ref|ZP_09234164.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20439]
gi|358041733|dbj|GAA70413.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20439]
Length = 310
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 165/360 (45%), Gaps = 76/360 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N++ +N DF LL S PS F+ + G ID+++ A + L +
Sbjct: 2 KAKSTRSKLHPRNQH-KNGYDFNLLTSQTPSLTAFLITTPAGNQSIDFSNNLAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +N+W IP+ LCP +P R +YIH++ DLLS + +IPT G ++K DIG
Sbjct: 61 LLKSHYNINFWDIPEHNLCPPIPGRVDYIHYLADLLSEDNQQVIPT----GRQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN +YPL G S W F GSD+ A++ A++ + N + I +++ N E
Sbjct: 117 TGANLVYPLTGNSEYQWHFTGSDIDSAAIKIAKQLAQFN---NLKITLKQQKNPEHI--- 170
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
F A+ YH
Sbjct: 171 --------------------------------FKGVVNAKDLYH---------------- 182
Query: 244 FCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDS 290
+CNPPF S EEA G P + GG E+ C GGE AFI+ +I++S
Sbjct: 183 LTMCNPPFHASAEEANKGSERKWKNLGKTPSQALNFGGQSNELWCEGGELAFISNMIKES 242
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V +K L L ++L++ ++ K E QGQ +AWS+ A +
Sbjct: 243 RDHSDQVIWFTSLVSKKETLAALEAQLKQQPISEFKIVEMAQGQKVSRFIAWSYFDKATR 302
>gi|423205912|ref|ZP_17192468.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
AMC34]
gi|404623303|gb|EKB20155.1| ribosomal RNA large subunit methyltransferase F [Aeromonas veronii
AMC34]
Length = 323
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 151/353 (42%), Gaps = 75/353 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ + +H +N++ DF L P VF + G I++ + +A + L R LL
Sbjct: 15 DRKSGLHSRNRHQAGY-DFEALCLRTPELAAHVFINDYGTRTINFANPDAVKTLNRALLA 73
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGAN 127
H +G+ W +P G LCP +P R +Y+HW DLL S+ +PT G V+ DIG GAN
Sbjct: 74 HHYGITHWDLPAGYLCPPIPGRVDYLHWAADLLAESAGQLPT----GKGVRVLDIGVGAN 129
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPLLGA GW FVGSD+ V+++ A +SN + IE R N
Sbjct: 130 CIYPLLGAREYGWRFVGSDIDPVSVKAATLLARSN-GLGSQIECRLQGNPNH-------- 180
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
V G++ E+F +C
Sbjct: 181 -------------------------------------------VFRGIIGPKERFALTLC 197
Query: 248 NPPFFESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S+EEA P + GG E+ C GGE AF+ ++ S
Sbjct: 198 NPPFHASLEEASRGTERKLRNLGKEVTGAPVLNFGGQKAELWCEGGEAAFLANMVAQSKE 257
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++S+V +K NL L +VG V+ + QG LAWSF+
Sbjct: 258 FATQCLWFSSLVSKKENLPGAKKALNRVGARQVRVIDMAQGNKVSRILAWSFL 310
>gi|401762900|ref|YP_006577907.1| 23S rRNA mA1618 methyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400174434|gb|AFP69283.1| 23S rRNA mA1618 methyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 303
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 160/355 (45%), Gaps = 83/355 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D L P+ + ++ + G P +++ D A + L + LL H
Sbjct: 4 QKPGLHPRNRHRSRY-DMNALCQSCPALQDYIVETPAGEPSVNFADPLAVKTLNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNG---DKVKGFDIGTGAN 127
+G+ +W IP+G LCP VP R++Y+H + DLL+ + R+G + DIGTGAN
Sbjct: 63 FYGVAHWDIPEGFLCPPVPGRADYVHHLADLLADD------RDGAIPQQASVLDIGTGAN 116
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPL+G W F GS++ A A+ + +N +S I +R+
Sbjct: 117 LIYPLIGVHEYHWRFTGSEIGAEAFASAQAIISANAGLSRSIRLRR-------------- 162
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ ++S FN G++ E +D +C
Sbjct: 163 ---------------------QKEATSIFN----------------GIIHKNESYDATMC 185
Query: 248 NPPFFES-----------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF +S E+A LN GG +E+ C GGE AFI R+I +S
Sbjct: 186 NPPFHDSAAAARAGSERKRRNLGQAEDAALN----FGGQQQELWCEGGEVAFILRMIAES 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ +W+T++V R NL L L + G V E QGQ +AWSF+
Sbjct: 242 KQFGRQVKWFTTLVSRGDNLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWSFM 296
>gi|153833405|ref|ZP_01986072.1| conserved hypothetical protein [Vibrio harveyi HY01]
gi|148870293|gb|EDL69223.1| conserved hypothetical protein [Vibrio harveyi HY01]
Length = 388
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 87/357 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P + FV + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 78 DFKKLIAAEPQLKSFVIKNPKGEDSINFSDPKAVKMLNKALLAAHYDIEYWDIPDTYLCP 137
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL + + + KV+ D+G GANCIYP++G + GW + GSD
Sbjct: 138 PIPGRADYVHRVAELLDGEVKGKYAHH--KVRALDVGVGANCIYPIVGVTQYGWHYTGSD 195
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A + N ++ IE+ +Q++ ESN
Sbjct: 196 VDPKSIESARAITERNASLNGKIEL-----------LQQT-------SESN--------- 228
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G+++ +++D CNPPF S EEA +
Sbjct: 229 ------------------------IYRGIIQPNDRYDITTCNPPFHRSAEEAAMGSQRKL 264
Query: 261 ---------------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
P + GG E+ C GGE AFI ++ +S A
Sbjct: 265 DNLKANQRKKGVKAQANQAKTPQVKANKPALNFGGQNAELWCEGGEAAFIRKMANESQAF 324
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++ A++
Sbjct: 325 SAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRIVEMSQGQKVSRFMAWSYMDKAQR 381
>gi|392554892|ref|ZP_10302029.1| 23S rRNA mA1618 methyltransferase [Pseudoalteromonas undina NCIMB
2128]
Length = 310
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 165/360 (45%), Gaps = 76/360 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N++ +N DF LL S PS F+ + G ID+++ A + L +
Sbjct: 2 KAKSTRSKLHPRNQH-KNGYDFNLLTSQTPSLTAFLITTPAGNQSIDFSNNLAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +N+W IP+ LCP +P R +YIH++ DLLS + +IPT G ++K DIG
Sbjct: 61 LLKSHYNINFWDIPEHNLCPPIPGRVDYIHYLADLLSEDNQQVIPT----GRQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN +YPL G S W F GSD+ A++ A++ + N + I +++ N E
Sbjct: 117 TGANLVYPLTGNSEYQWHFTGSDIDSAAIKIAKQLAQFN---NLKITLKQQKNPEHI--- 170
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
F A+ YH
Sbjct: 171 --------------------------------FKGVINAKDLYH---------------- 182
Query: 244 FCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDS 290
+CNPPF S EEA G P + GG E+ C GGE AFI+ +I++S
Sbjct: 183 LTMCNPPFHASAEEASKGSERKWKNLGKAPSQALNFGGQSNELWCEGGELAFISNMIKES 242
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V +K L L ++L++ ++ K E QGQ +AWS+ A +
Sbjct: 243 RVHSDQVIWFTSLVSKKETLAALEAQLKQQPISEFKIVEMAQGQKVSRFIAWSYFDKATR 302
>gi|238763786|ref|ZP_04624744.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
kristensenii ATCC 33638]
gi|238697916|gb|EEP90675.1| Ribosomal RNA large subunit methyltransferase F [Yersinia
kristensenii ATCC 33638]
Length = 335
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 159/360 (44%), Gaps = 76/360 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF L+ P PF+ + G ID+ A + L + LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDALSVSCPELIPFLAPNAYGDISIDFASPLAVKMLNKALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGA 126
H + + +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GA
Sbjct: 83 HFYCIEYWDIPADFLCPPIPGRADYVHHLADLLASCNDGVIP----QGKNIAVLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+D+ AL A+ V NP + + +++ + ++
Sbjct: 139 NCIYPIIGQREYGWRFTGTDIDSQALSAAKMVVSMNPTLKNTLRLKQQKDPQA------- 191
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ E++D +
Sbjct: 192 --------------------------------------------IFEGILAVNERYDATL 207
Query: 247 CNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S EEA P + GG E+ C GGE F++R++ +S
Sbjct: 208 CNPPFHGSAEEAAATTRRKLHKLGKGEVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAES 267
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W+TS++ +K+ L + LR V+T + QGQ +AW+F+ P ++
Sbjct: 268 ATKAQNCFWFTSLISKKTTLPAIYHALRYANAVEVRTIDMAQGQKVSRFVAWTFLTPEQQ 327
>gi|119776753|ref|YP_929493.1| putative SAM-dependent methyltransferase [Shewanella amazonensis
SB2B]
gi|205829608|sp|A1SBR7.1|RLMF_SHEAM RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|119769253|gb|ABM01824.1| protein of unknown function DUF890 [Shewanella amazonensis SB2B]
Length = 319
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 161/368 (43%), Gaps = 84/368 (22%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M SKK+ + + P HP N + + DF+ L + +P +PFV + G ID+ A
Sbjct: 8 MTSKKQSQGLPKGP--HPDNAHRDGY-DFSALVASHPPLKPFVRANAYGNLSIDFALPEA 64
Query: 61 TRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG 119
+ L LL H +G++ W IP G LCP +P R +Y+H +EDLL P T D +
Sbjct: 65 VKALNCALLKHHYGISRWDIPKGFLCPPIPGRVDYLHHLEDLLRQT--PGT----DGLPL 118
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIGTGAN IY LL AS G + V +D+ +L +K+NP + + I +R N
Sbjct: 119 LDIGTGANGIYALLAASRFGRAVVATDIAKASLTNVATILKANPGLEKRISLRFQSNPRH 178
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
+L GV +
Sbjct: 179 ---------------------------------------------------ILTGVTQTN 187
Query: 240 EQFDFCICNPPFFESMEEAGL----------------------NPKT-SCGGTPEEMVCS 276
EQF C+CNPPF S EA L P+T + GG E+ C
Sbjct: 188 EQFAACVCNPPFHASAAEAALGTNRKLEGLAKSRGQRHISGPGKPQTLNFGGQDAELWCD 247
Query: 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTC 336
GGER+F+ R+I++S L W+T++V + NL+ +L + G + +K E QGQ
Sbjct: 248 GGERSFLLRLIDESARLPDLCVWFTTLVSKSDNLRPCKRRLEQRGASEIKVIEMQQGQKI 307
Query: 337 RWGLAWSF 344
LAW F
Sbjct: 308 TRILAWRF 315
>gi|195150571|ref|XP_002016224.1| GL10611 [Drosophila persimilis]
gi|194110071|gb|EDW32114.1| GL10611 [Drosophila persimilis]
Length = 300
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 161/342 (47%), Gaps = 68/342 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N PPD+ LA Y F G+ +++ + REL+++LL L
Sbjct: 6 MHPRNILRV-PPDYTKLAIKYRDFRQVCELELTGKVSVNFRNEKTLRELSKMLLKEYFKL 64
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ G L PT+ R NYI W+ED+L +P N + V+G D+G G++CIY LLGA
Sbjct: 65 DVDFAPGSLVPTLALRLNYILWLEDML----LPL---NLETVRGIDVGCGSSCIYSLLGA 117
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW+ + + + +++A KNV+ N ++ ELIE+
Sbjct: 118 KKNGWNMLALESKEENIDYARKNVRRN-NLEELIEVY----------------------- 153
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
A+P S+ F SY L ++F FC+CNPPFF+S
Sbjct: 154 ------------AQPDKSNIF-------KSYFETEKL------RKEFHFCLCNPPFFDSN 188
Query: 256 EEAGLN-----------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
P G+ EE+ C GGE F+ RIIE+S KQ +TSM+
Sbjct: 189 SPNPFGGNTRNPQRRPAPNNVRTGSAEELTCEGGEVHFVQRIIEESQLNKQRVLIFTSML 248
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
G K+++ ++ L++ +T V TTEF QG T RW +AWS P
Sbjct: 249 GVKASVPKILDYLKERQITNVTTTEFHQGHTTRWAVAWSHQP 290
>gi|323491355|ref|ZP_08096540.1| 23S rRNA mA1618 methyltransferase [Vibrio brasiliensis LMG 20546]
gi|323314481|gb|EGA67560.1| 23S rRNA mA1618 methyltransferase [Vibrio brasiliensis LMG 20546]
Length = 350
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 168/386 (43%), Gaps = 93/386 (24%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
+R+ + +H +N ++ DF L P + +V + G I+++D A + + + L
Sbjct: 28 KRKTKAGLHKRNLHN-GRYDFKALIEALPELKQYVVKNPKGEASINFSDPVAVKLINKAL 86
Query: 69 LLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
L H + + W IP G LCP +P R++Y+H + +LLS + + + +V DIG GAN
Sbjct: 87 LAHHYSVTQWDIPQGYLCPPIPGRADYVHRLAELLSDDCGGSAPK---RVNALDIGVGAN 143
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYP++GA+ GW +VGSD+ V+++ + K V +NP + IE R
Sbjct: 144 CIYPIVGATQYGWHYVGSDIDPVSVDNSNKIVANNPVLEGQIECR--------------- 188
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+Q ES + G++ GE + C
Sbjct: 189 ----LQKESRY--------------------------------LFKGIIEQGEFYHITTC 212
Query: 248 NPPFFESMEEA---------------------------GLNPKTSCGGTPEEMVCSGGER 280
NPPF +S++EA + P + GG E+ CSGGE
Sbjct: 213 NPPFHKSLQEAQQGSARKINNLSTNKVKRGQASSASKNKVAPVLNFGGQQAELWCSGGEA 272
Query: 281 AFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340
AFI + +S W+++++ +K N++++ L K G V+ E QGQ +
Sbjct: 273 AFIKNMAFESRDFAHQVLWFSTLISKKENVRWMRKNLEKAGAKEVQIVEMSQGQKTSRFI 332
Query: 341 AWSFVPPARKIISPHVAEKKNLSFML 366
AW+F H E++ ML
Sbjct: 333 AWTF----------HTQEQRKQWLML 348
>gi|19922302|ref|NP_611015.1| CG7544, isoform A [Drosophila melanogaster]
gi|281363415|ref|NP_001163156.1| CG7544, isoform B [Drosophila melanogaster]
gi|122102825|sp|Q7K3B9.1|MET16_DROME RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|16185375|gb|AAL13909.1| LD39460p [Drosophila melanogaster]
gi|21627173|gb|AAF58169.2| CG7544, isoform A [Drosophila melanogaster]
gi|220946252|gb|ACL85669.1| CG7544-PA [synthetic construct]
gi|220955938|gb|ACL90512.1| CG7544-PA [synthetic construct]
gi|272432489|gb|ACZ94428.1| CG7544, isoform B [Drosophila melanogaster]
Length = 305
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 163/340 (47%), Gaps = 68/340 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N P D+ +A Y F +G+ +++ + RELT++LL + L
Sbjct: 13 MHPRNVLRTQP-DYTKMAIKYKDFRQQCQLELNGKVSVNFRNEKTLRELTKMLLKEYYDL 71
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ G L PT+ R NYI W+EDL+ P +N ++G DIG G++CIY LLGA
Sbjct: 72 DVDFAPGSLVPTLALRLNYILWLEDLME----PLNLQN---IRGIDIGCGSSCIYSLLGA 124
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
GW + + +E+A++NVK N H+ LIE+
Sbjct: 125 KKNGWHMLALESKPQNIEYAKENVKRN-HMESLIEVY----------------------- 160
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM 255
A+P +++ F SY + Q+ FC+CNPPFF+S
Sbjct: 161 ------------AQPDNTNIF-------KSY------FEQDQQQLQYQFCLCNPPFFDSN 195
Query: 256 EEAGLN-----------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
L P + G+ EE+ C GGE F+ RII++S+ K+ R +T+M+
Sbjct: 196 LPNPLGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDESLENKERVRIFTTML 255
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
G K+N+ ++ L+++ V V TTEF QG T RW +AWSF
Sbjct: 256 GVKANVPRILDYLKELQVANVSTTEFHQGHTTRWAVAWSF 295
>gi|343502946|ref|ZP_08740782.1| 23S rRNA mA1618 methyltransferase [Vibrio tubiashii ATCC 19109]
gi|418479867|ref|ZP_13048937.1| 23S rRNA mA1618 methyltransferase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342812845|gb|EGU47833.1| 23S rRNA mA1618 methyltransferase [Vibrio tubiashii ATCC 19109]
gi|384572515|gb|EIF03031.1| 23S rRNA mA1618 methyltransferase [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 350
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 154/345 (44%), Gaps = 82/345 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DFA L + P + V + G P I+++D A + L + LL + +G+ W IP G LCP
Sbjct: 46 DFAKLTAALPELKKHVVKNPKGEPSINFSDPLAVKLLNKALLAYHYGVTEWDIPQGYLCP 105
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + ++L+ + S ++V+ DIG GANCIYP++GA+ GW +VGSD
Sbjct: 106 PIPGRADYIHRLAEILTKE---SKSFKHNQVRALDIGLGANCIYPIVGATQYGWHYVGSD 162
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ V+ VDNS +SN +SG ++
Sbjct: 163 VDSVS----------------------VDNSNHIA-------------QSNKVLSGRVEA 187
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ S F +++ E +D CNPPF +S+EEA
Sbjct: 188 RLQKDSRHFFK----------------DIIKPNEFYDVTTCNPPFHKSLEEAQQGTERKI 231
Query: 261 ---------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
+P + GG E+ C GGE AF+ + +S Q W
Sbjct: 232 KNLSASKSKRGQPTGQMKAKSSPILNFGGQKAELWCPGGEAAFVKNMAFESRDFAQQVLW 291
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+++++ +K N++++ L K G VK E QGQ +AW+F
Sbjct: 292 FSTLISKKENVRWMRKNLEKAGAKEVKVVEMSQGQKVSRFIAWTF 336
>gi|389707893|ref|ZP_10186533.1| 23S rRNA mA1618 methyltransferase [Acinetobacter sp. HA]
gi|388610512|gb|EIM39632.1| 23S rRNA mA1618 methyltransferase [Acinetobacter sp. HA]
Length = 324
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 168/350 (48%), Gaps = 66/350 (18%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+++ +H +N + DF L P PFV + ID++D A + L + LL
Sbjct: 10 QQKSELHVRNLHRSRY-DFPQLIKTCPELAPFVRLNPYNDLSIDFSDPQAVKMLNKALLK 68
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++YIH++ DLLS+N IPT G V+ DIG GA
Sbjct: 69 HFYGIQYWDIPQDFLCPPIPGRADYIHYLADLLSANHQGQIPT----GPAVQVLDIGVGA 124
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST------ 180
NCIYP++G GW FVGSD+ +++ A+ V++NP++ + I+IR NS +
Sbjct: 125 NCIYPIIGHRSYGWKFVGSDIHSASVKSAQFIVEANPNLRKGIQIRLQKNSSNIFNGVIK 184
Query: 181 PSIQESLTG-----KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGV 235
P+ + LT + QDE+N + + + +P + L G Q +
Sbjct: 185 PTDRFDLTMCNPPFHASQDEANATTTQKLRKLGKPVDRTKVVLNFGGQKN---------- 234
Query: 236 VRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
E+ C GGE F+ +++++S+ +
Sbjct: 235 ------------------------------------ELWCDGGEERFVCQMVQESIQFAE 258
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++++V +K+ L L++ LRK G VKT + QGQ +AW+F+
Sbjct: 259 QCLWFSTLVSKKTTLPVLLNALRKSGAVDVKTIKMTQGQKESRFVAWTFL 308
>gi|393763520|ref|ZP_10352140.1| 23S rRNA mA1618 methyltransferase [Alishewanella agri BL06]
gi|392605588|gb|EIW88479.1| 23S rRNA mA1618 methyltransferase [Alishewanella agri BL06]
Length = 292
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 66/343 (19%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP N + + DF L YP+ + F+ + G ID++ A + L +L +
Sbjct: 2 SLHPNNPH-QGRYDFTRLCRHYPALQAFIITTPAGDSSIDFSQAAAVQALNAAILACHYQ 60
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ +W +P G LCP +P R++Y+H+ DL++ + G + + D+G GANCIYP+L
Sbjct: 61 VTYWQLPPGYLCPPIPGRADYLHYAADLVA-ELTGVAKAQGKQFRLLDLGCGANCIYPIL 119
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
+ GW VGSD+ + AL+ A VK+N ++ LIE+R
Sbjct: 120 ASRSFGWRAVGSDIDNTALKVAGAIVKANANLKGLIELR--------------------- 158
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+P ++ +L G+++ GE +D +CNPPF+
Sbjct: 159 --------------LQPKATE----------------LLFGIIQPGEYYDISVCNPPFYT 188
Query: 254 S------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
S + N + GT E+ C GGE AFI ++I DS W+T
Sbjct: 189 SAAEAAAANQQKWQKLGKANNGRNFAGTANELWCEGGEVAFIKKLIADSSLFAGQVGWFT 248
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S+V ++ +L L+++LR++ V V+ + GQ LAW F
Sbjct: 249 SLVSQQKHLPALVAQLRRLAVAEVRQIKMQHGQKISTILAWRF 291
>gi|448746692|ref|ZP_21728357.1| Ribosomal RNA large subunit methyltransferase F [Halomonas
titanicae BH1]
gi|445565620|gb|ELY21729.1| Ribosomal RNA large subunit methyltransferase F [Halomonas
titanicae BH1]
Length = 314
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 156/355 (43%), Gaps = 78/355 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HPKN +++ DF +L +P P+V + G ID+ D A + L LL
Sbjct: 16 RKGLHPKNLHNQGY-DFPVLVKSHPPLAPYVKPNAYGELSIDFADPLAVKTLNAALLNRY 74
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + +W IP+G LCP +P R++YIH + DLL + +K DIGTGAN IYP
Sbjct: 75 YNIVDWDIPEGALCPPIPGRADYIHHMADLLEFGL----GHEQPSIKLLDIGTGANGIYP 130
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LL + GW VGSD+ +LE + +NP + + +R
Sbjct: 131 LLACQIYGWQCVGSDINPQSLENVATIITNNPKLKDRFTLR------------------- 171
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
Q + N + G+++DGE FD +CNPPF
Sbjct: 172 TQHDKNH--------------------------------IFEGIIQDGEFFDVSVCNPPF 199
Query: 252 FESMEEA---------------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
S++EA +P + GG E+ C GGE+ F+ ++I +S
Sbjct: 200 HASLDEALKGSQRKFNNLARSRGELKATTQSPTLNFGGMGAELWCKGGEQLFLKKLIRES 259
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
RW++S+V + N+K +RK+G V+ E QG LAW+F+
Sbjct: 260 QEYATQCRWFSSLVSKADNVKPAKKLIRKLGAVDVREIEMKQGNKITRILAWTFM 314
>gi|399519541|ref|ZP_10760336.1| putative SAM-dependent methyltransferase [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112637|emb|CCH36894.1| putative SAM-dependent methyltransferase [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 333
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 155/347 (44%), Gaps = 71/347 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L P FV + G+P ID+ + A + R LL +G+
Sbjct: 25 LHPRNRH-QGRYDFPALIKASPELGQFVITNPYGKPSIDFANPAAVKVFNRALLAQYYGI 83
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IPDG LCP +P R++Y+H + DLL+++ R G +V DIG GANCIYPL+G
Sbjct: 84 RHWDIPDGYLCPPIPGRADYLHNLADLLATDNDGQIPR-GARVYALDIGVGANCIYPLIG 142
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
W F+G+D+ AL A V +NP ++ IE+R N E
Sbjct: 143 HCEYAWHFIGADIAPAALASARAIVTANPQLASGIELRLQANPEH--------------- 187
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ +G++ E+ D +CNPPF S
Sbjct: 188 ------------------------------------IFLGLLGSEERIDLTLCNPPFHAS 211
Query: 255 MEEAG------------LNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
+EA L+PK GG E+ C GGE AF+ R+ +S + +
Sbjct: 212 ADEASSGSMRKWRNLGKLDPKRQLPVLNFGGQAAELWCPGGEAAFLKRMASESAQVAEQV 271
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++S+V + N++ L L + G V+ QGQ +AW+F
Sbjct: 272 LWFSSLVSKGGNVELLQGWLARAGAVEVRILGMSQGQKQSRLVAWTF 318
>gi|157963957|ref|YP_001503991.1| putative SAM-dependent methyltransferase [Shewanella pealeana ATCC
700345]
gi|205829609|sp|A8HA69.1|RLMF_SHEPA RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|157848957|gb|ABV89456.1| protein of unknown function DUF890 [Shewanella pealeana ATCC
700345]
Length = 380
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 163/385 (42%), Gaps = 99/385 (25%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
+ ++ +HP+N ++ N DFA L + +P + FV + G ID+ D A + L L
Sbjct: 42 KLQKSKALHPRNAHN-NGYDFAALVTAFPKLKAFVKPNPYGNLSIDFADPVAVKMLNAAL 100
Query: 69 LLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL-----SSNIIPTTSRNGDKVKGFDI 122
L +G+ W IPDG LCP +P R++YIH + DLL S IP G KV+ DI
Sbjct: 101 LKFHYGVGHWDIPDGFLCPPIPGRADYIHHVADLLAVKKSSKKRIP----KGPKVRVLDI 156
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
GTGAN IYPLLG GW FVGSD+ +++ A++ N I+ R
Sbjct: 157 GTGANVIYPLLGIQSYGWDFVGSDVDPLSIANAQQIFAGNSDIANKFSSR---------- 206
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
L A ++ +H GV+ E+F
Sbjct: 207 -----------------------------------LQADSKHVFH------GVIEANERF 225
Query: 243 DFCICNPPFFESMEEAG------------------------------LNPKT-------S 265
D +CNPPF S+ EA + P T +
Sbjct: 226 DLTLCNPPFHASLAEASEGTARKLKNLAANRAKSSQVMSPQVQPSGKVKPATDKNHGVLN 285
Query: 266 CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIV 325
GG E+ C GGE F+ +IE+S W+T++V +K NL + L K+ V
Sbjct: 286 FGGQKAELWCEGGELQFLRTMIEESHDFASQCLWFTTLVSKKENLNPAKALLAKIKAEEV 345
Query: 326 KTTEFVQGQTCRWGLAWSFVPPARK 350
K E QG LAW+F+ P ++
Sbjct: 346 KEIEMHQGNKITRVLAWTFLKPEQR 370
>gi|302879362|ref|YP_003847926.1| rRNA (adenine-N(6)-)-methyltransferase [Gallionella
capsiferriformans ES-2]
gi|302582151|gb|ADL56162.1| rRNA (adenine-N(6)-)-methyltransferase [Gallionella
capsiferriformans ES-2]
Length = 319
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 160/344 (46%), Gaps = 75/344 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + DF L + P FV + G ID+ D A R L R LL+ + +
Sbjct: 19 LHPRNPH-RGRYDFRQLIAASPELAVFVSINPYGDESIDFADPAAVRALNRALLIQYYDI 77
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLS-SNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
W IP LCP +P R++Y+H++ DLL+ ++P+ V+ DIGTGANCIYPL+
Sbjct: 78 QGWDIPAHYLCPPIPGRADYLHYLADLLAEGGVVPSG------VRVLDIGTGANCIYPLV 131
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G GW FVGSD+ AL A++ + +NP +S IE+R
Sbjct: 132 GQRTFGWQFVGSDIEPAALANAQRILDANPDLSGAIELR--------------------- 170
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+ S S FN GVV+ GE FD +CNPPF
Sbjct: 171 --------------LQRSPQSIFN----------------GVVKPGEIFDLTLCNPPFHA 200
Query: 254 SMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
S+ EA G + + GG E+ C GGE AF+ R+I +S + W+
Sbjct: 201 SLAEANLGTGRKWKNLGKGASRALNFGGQGAELWCRGGEEAFVCRMIAESAQVNCL--WH 258
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S++ + S+L + L GV V+T E QGQ +AW+F
Sbjct: 259 SSLISKSSSLPGVYRALNNAGVQEVRTIEMAQGQKKSRFVAWTF 302
>gi|420660128|ref|ZP_15146559.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-36]
gi|420833004|ref|ZP_15299632.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-99]
gi|391536172|gb|EIR87185.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-36]
gi|391708824|gb|EIT40051.1| ribosomal RNA large subunit methyltransferase F [Yersinia pestis
PY-99]
Length = 291
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 155/343 (45%), Gaps = 77/343 (22%)
Query: 37 PSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYI 95
P PF+ + G +D+ D A + L + LL H +G+ +W IP LCP +P R++Y+
Sbjct: 4 PELIPFLAPTAYGDISVDFADPLAVKMLNKALLKHFYGIEYWDIPADSLCPPIPGRADYV 63
Query: 96 HWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152
H + DLL+S +IP G + DIG GANCIYP++G GW F G+D+ AL
Sbjct: 64 HHLADLLASCNGEVIP----KGKNIALLDIGVGANCIYPIIGQREYGWRFTGTDIDSHAL 119
Query: 153 EWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSS 212
A+ V NP + + ++ ++ +P +
Sbjct: 120 SAAKMVVSMNPTLKNTLRLK---------------------------------QQKDPHA 146
Query: 213 SSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA-------------- 258
+ GV E++D +CNPPF S EEA
Sbjct: 147 ------------------IFEGVWAVNERYDATLCNPPFHGSAEEAAATTRRKLHKLGKN 188
Query: 259 --GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISK 316
P + GG E+ C GGE F++R++ +SVA Q W+TS++ +K+ L +
Sbjct: 189 EVAAKPVQNFGGKNSELWCEGGEEGFVSRMVAESVAKAQNCFWFTSLISKKTTLPAIYHA 248
Query: 317 LRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAEK 359
LR V V+T E QGQ +AW+F+ P ++ + VAE+
Sbjct: 249 LRYVKAVEVRTIEMAQGQKVSRFVAWTFLTPEQQ--AAWVAER 289
>gi|213163840|ref|ZP_03349550.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213424781|ref|ZP_03357531.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213854566|ref|ZP_03382806.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
Length = 306
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 157/348 (45%), Gaps = 72/348 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G ANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVG--ANCIY 116
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 117 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 159
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 160 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 185
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S ++
Sbjct: 186 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQTFRRQV 245
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 246 LWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 293
>gi|350531587|ref|ZP_08910528.1| 23S rRNA mA1618 methyltransferase [Vibrio rotiferianus DAT722]
gi|76803891|gb|ABA55834.1| hypothetical protein [Vibrio sp. DAT722]
Length = 375
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 152/347 (43%), Gaps = 82/347 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L P +PFV + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 70 DFKKLVIAEPQLKPFVIKNPKGEDSINFSDPKAVKMLNKALLAAYYDIEFWDIPDTYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL V+ D+G GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYVHRVAELLDGEAKGKYLHQN--VRALDVGVGANCIYPIVGVTQYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A+ V N ++ IE+ +Q+ DESN
Sbjct: 188 VDPKSIESAQAIVTRNASLNGKIEL-----------VQQG-------DESN--------- 220
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G+++ +++D CNPPF S EEA +
Sbjct: 221 ------------------------IYRGIIQPNDRYDVTTCNPPFHRSAEEAAMGSQRKL 256
Query: 261 ----------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
P + GG E+ C GGE AFI ++ +S A
Sbjct: 257 DNLKANQRKKGVKVQANQGKANKPALNFGGQNAELWCEGGEAAFIRKMANESQAFSAQVL 316
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++
Sbjct: 317 WFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKISRFMAWSYM 363
>gi|359447745|ref|ZP_09237312.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20480]
gi|358046389|dbj|GAA73561.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20480]
Length = 310
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 70/346 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+N+++ N DF LL + P+ P++ + G ID+ + A + L + LL
Sbjct: 7 RAKLHPRNQHN-NGYDFNLLTAALPALSPYIVNTPTGTKSIDFANNKAVKTLNQALLKAH 65
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + +W IP+ LCP +P R +YIH + DLLS + T + G +VK DIGTGAN +YP
Sbjct: 66 YNIEFWDIPEHNLCPPIPGRVDYIHHLADLLSEDNKQTIPQ-GKQVKVLDIGTGANLVYP 124
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L G S W F GSD+ V+++ A+ +I + + + T +Q+
Sbjct: 125 LTGTSEYNWHFTGSDIDPVSVKIAK-------------QIAQFNALKITVKLQKK----- 166
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
PA + GV+ + + +CNPPF
Sbjct: 167 ---------------------------PAN---------IFKGVINQKDLYHLTLCNPPF 190
Query: 252 FESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
S +EA G P + GG E+ C GGE FIT +I +S Q
Sbjct: 191 HASEQEAKKGSERKWKNLGKAPSKTLNFGGNNNELWCEGGEVQFITTMIAESEEFAQQVL 250
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V +K +L L +KL+ + K + QGQ LAWS+
Sbjct: 251 WFTSLVSKKDSLSALEAKLKTYPIAEYKIIDMAQGQKVSRFLAWSY 296
>gi|198457386|ref|XP_001360645.2| GA20428 [Drosophila pseudoobscura pseudoobscura]
gi|221222462|sp|Q290Z2.2|MET16_DROPS RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
Full=Methyltransferase 10 domain-containing protein
gi|198135956|gb|EAL25220.2| GA20428 [Drosophila pseudoobscura pseudoobscura]
Length = 305
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 165/350 (47%), Gaps = 68/350 (19%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
R ++ + +HP+N PPD+ LA Y F G+ +++ + REL+++
Sbjct: 3 RNKKNKYAMHPRNILRV-PPDYTKLAIKYRDFRQVCELELTGKVSVNFRNEKTLRELSKM 61
Query: 68 LLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
LL L+ G L PT+ R NYI W+ED+L +P N + V+G D+G G++
Sbjct: 62 LLKEYFELDVDFAPGSLVPTLALRLNYILWLEDML----LPL---NLETVRGIDVGCGSS 114
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIY LLGA GW+ + + + +++A +NV+ N ++ +LIE+
Sbjct: 115 CIYSLLGAKKNGWNMLALESKEENIDYARENVRRN-NLEDLIEVY--------------- 158
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
A+P S+ F SY L ++F FC+C
Sbjct: 159 --------------------AQPDKSNIF-------KSYFETEKL------RKEFHFCLC 185
Query: 248 NPPFFESMEEAGLN-----------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
NPPFF+S P G+ EE+ C GGE F+ RIIE+S KQ
Sbjct: 186 NPPFFDSNSPNPFGGNTRNPQRRPAPNNVRTGSAEELTCEGGEVHFVQRIIEESQLNKQR 245
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
+TSM+G K+++ ++ L++ +T V TTEF QG T RW +AWS P
Sbjct: 246 VLIFTSMLGVKASVPKILDYLKERQITNVTTTEFHQGHTTRWAVAWSHQP 295
>gi|392538208|ref|ZP_10285345.1| 23S rRNA mA1618 methyltransferase [Pseudoalteromonas marina mano4]
Length = 310
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 70/346 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+N+++ N DF LL + P+ P++ + G ID+ + A + L + LL
Sbjct: 7 RAKLHPRNQHN-NGYDFNLLTAALPALSPYIVNTPAGTKSIDFANNKAVKTLNQALLKAH 65
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + +W IP+ LCP +P R +YIH + DLLS + T + G +VK DIGTGAN +YP
Sbjct: 66 YNIEFWDIPEHNLCPPIPGRVDYIHHLADLLSEDNKQTIPQ-GKQVKVLDIGTGANLVYP 124
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L G S W F GSD+ V+++ A+ +I + + + T +Q+
Sbjct: 125 LTGTSEYNWHFTGSDIDPVSVKIAK-------------QIAQFNALKITVKLQKK----- 166
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
PA + GV+ + + +CNPPF
Sbjct: 167 ---------------------------PAN---------IFKGVINQKDLYHLTLCNPPF 190
Query: 252 FESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
S +EA G P + GG E+ C GGE FIT +I +S Q
Sbjct: 191 HASEQEAKKGSERKWKNLGKAPSKTLNFGGNNNELWCEGGEVQFITTMIAESEEFAQQVL 250
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V +K +L L +KL+ + K + QGQ LAWS+
Sbjct: 251 WFTSLVSKKDSLSALEAKLKTYPIAEYKIIDMAQGQKVSRFLAWSY 296
>gi|430814372|emb|CCJ28371.1| unnamed protein product [Pneumocystis jirovecii]
Length = 424
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 160/329 (48%), Gaps = 54/329 (16%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
+N Y + PP+FA LA YPS +PFV D + RI++ D A RE+T+ LL D ++ +
Sbjct: 4 RNFYIDEPPNFAELAENYPSLKPFV----DNQSRINFKDPAALREVTKCLLKKDFKIDIF 59
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL 138
+ + +LCP +PNR YI WI++L+ + ++ KV FDIGTG+ CIYPLLG S
Sbjct: 60 LHEERLCPPIPNRFAYILWIQELID---FVSYNQEEQKVLAFDIGTGSTCIYPLLGCSQR 116
Query: 139 -GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESN 197
W F +D+ +LE A+KNV N +DN + LT + DE N
Sbjct: 117 PNWFFYATDIDKFSLELAQKNVTRN----------GLDNRIKIIDSTKYLTLIPL-DELN 165
Query: 198 MDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE 257
+ + + PP F S ++
Sbjct: 166 I---------------------SNIKFCMCNPP-------------FYTSKEEMIASSQQ 191
Query: 258 AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKL 317
P +SC G+ EMV GGE F+ +II++S LK+ WYTSM+G+ S++ +I
Sbjct: 192 KSKKPFSSCTGSLTEMVTPGGEVGFVKKIIKESYFLKERVNWYTSMLGKLSSVIKIIELF 251
Query: 318 RKVGVTIVKTTEF-VQGQTCRWGLAWSFV 345
R++ + +E V G T RW + WSF+
Sbjct: 252 REMQIDNYVLSELPVGGNTRRWVVGWSFM 280
>gi|329961806|ref|ZP_08299820.1| rRNA adenine N-6-methyltransferase [Bacteroides fluxus YIT 12057]
gi|328531246|gb|EGF58090.1| rRNA adenine N-6-methyltransferase [Bacteroides fluxus YIT 12057]
Length = 296
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 157/349 (44%), Gaps = 71/349 (20%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +H NK+ + DF L Y + FV + G P I++ + A + L + LL+
Sbjct: 3 DKMELHKNNKH-QGKYDFPRLIENYQPLKKFVSPNPYGTPTINFFNPQAVKALNKALLIT 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+++W IP G LCP +P R++YIH++ DLL + DIG GANCIY
Sbjct: 62 YYGISYWDIPKGYLCPPIPGRADYIHYLADLLQEG---NNMGETKPCRCLDIGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P++G + GW+FVGSD+ V++E A K V NP ++ IE+R +S
Sbjct: 119 PIIGHTEYGWTFVGSDIDPVSIENARKIVTCNPVLAHKIELRLQKDSRK----------- 167
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ + FD +CNPP
Sbjct: 168 ----------------------------------------ILDGIIATEDFFDVTLCNPP 187
Query: 251 FF---ESMEEAGLNP------------KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
F E+ EE L K + GGT E+ C GGE F+ +I +S ++
Sbjct: 188 FHSSKEAAEEGNLRKLSSLKGKKITKTKLNFGGTSNELWCEGGEVRFLQNMITESRKYQR 247
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
RW+T +V +K L+ L ++L+ V V + QG LAW F
Sbjct: 248 NCRWFTCLVSKKETLEKLYARLKAVNVAEYRVIPMSQGTKVSRILAWRF 296
>gi|358399798|gb|EHK49135.1| hypothetical protein TRIATDRAFT_213918 [Trichoderma atroviride IMI
206040]
Length = 468
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 162/344 (47%), Gaps = 68/344 (19%)
Query: 18 PKNKYSEN----PPDFALLASLYPSFEPFVFYSRDGRPR-IDWTDFNATRELTRVLLLHD 72
PK+ Y + PDF +A P F F+ GR R ++++D NA +LT+ LL D
Sbjct: 29 PKDAYFRSLYTKAPDFRAMALNDPEFAAFI----KGRGRDLNFSDPNAVMQLTKTLLKVD 84
Query: 73 HGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN--GDKVKGFDIGTGANCIY 130
L+ +P+ +LCP V NR NYI W++DLL TTS + G K G DIGTGA+CIY
Sbjct: 85 FDLSIELPEDRLCPPVTNRHNYILWLKDLLD-----TTSYDEPGRKAVGLDIGTGASCIY 139
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG + WSF+ + LE AE NVK N S + I + + P
Sbjct: 140 PLLGCAQRDWSFIATG----DLECAENNVKLNDLESRVRVIGRKPDDALIP--------- 186
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
D+ MD + PP F
Sbjct: 187 --LDDLKMDC---------------------IDFTMTNPP-------------FYESTEA 210
Query: 251 FFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNL 310
ES P T+C G EMV GGE FI+RI E+S+ L++ +WYT+MVG S+L
Sbjct: 211 MLESAAGKSRPPFTACTGAEVEMVTEGGEVGFISRIFEESLVLRERIQWYTAMVGFLSSL 270
Query: 311 KFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PARKI 351
++ KL + + TEF QG +T RW +AWSF P PA+ +
Sbjct: 271 TKIVDKLWEHKIDNYAVTEFTQGNKTRRWAIAWSFQPLRPAQNV 314
>gi|409200450|ref|ZP_11228653.1| 23S rRNA mA1618 methyltransferase [Pseudoalteromonas flavipulchra
JG1]
Length = 285
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 161/346 (46%), Gaps = 75/346 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+NK++ D L ++ P+ + F + DG ID+T+ +A + L + LL D+ +
Sbjct: 1 MHPRNKHNSGY-DLDKLIAIEPALKNFTYSRADGIKSIDFTNPDAVKLLNKALLKSDYDI 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IP LCP VP R++YIH ++DLL + +P DKV+G DIGTGAN IYP+LG
Sbjct: 60 QVWDIPAQFLCPPVPGRADYIHALKDLLDESNLP------DKVQGVDIGTGANLIYPILG 113
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ W FV SD+ +A++ A+ I+EL L K +Q
Sbjct: 114 SREYNWRFVASDINPLAVKCAKT-------IAEL----------------NKLPVKVMQ- 149
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ + F A YH F +CNPPF S
Sbjct: 150 --------------QKQPNHFFKTIIKANQFYH----------------FSMCNPPFHSS 179
Query: 255 MEEA---------GLN--PKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
+A LN P+ S GG +E+ C GGE+ FI +I +SV K+ W+T
Sbjct: 180 EADANKGTQRKWKNLNRAPQASLNFGGQAQELWCEGGEKRFILDMISESVTFKEQVYWFT 239
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347
S++ K N+K L +L++ +K E QG +AWSF P
Sbjct: 240 SLISNKDNVKPLKQQLKQFAAEQIKVIEMEQGNKTSRFIAWSFFTP 285
>gi|119468636|ref|ZP_01611688.1| predicted SAM-dependent methyltransferase [Alteromonadales
bacterium TW-7]
gi|119447692|gb|EAW28958.1| predicted SAM-dependent methyltransferase [Alteromonadales
bacterium TW-7]
Length = 310
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 158/346 (45%), Gaps = 70/346 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+N+++ N DF LL + P+ P++ + G ID+ + A + L + LL
Sbjct: 7 RTKLHPRNQHN-NGYDFNLLTAALPALSPYIVNTPAGTKSIDFANNKAVKTLNQALLKAH 65
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + +W IP+ LCP +P R +YIH + DLLS + T + G +VK DIGTGAN +YP
Sbjct: 66 YNIEFWDIPEHNLCPPIPGRVDYIHHLADLLSEDNKQTIPQ-GKQVKVLDIGTGANLVYP 124
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L G S W F GSD+ V+++ A+ +I + + + T +Q+
Sbjct: 125 LTGTSEYNWHFTGSDIDPVSVKIAK-------------QIAQFNALKITVKLQKK----- 166
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
PA + GV+ + + +CNPPF
Sbjct: 167 ---------------------------PAN---------IFKGVINQKDLYHLTLCNPPF 190
Query: 252 FESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
S +EA G P + GG E+ C GGE FIT +I +S Q
Sbjct: 191 HASEQEAKKGSERKWKNLGKAPSKTLNFGGNNNELWCEGGEVQFITTMIAESEEFAQQVL 250
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V +K +L L +KL+ + K + QGQ LAWS+
Sbjct: 251 WFTSLVSKKDSLSALEAKLKTYPIAEYKIIDMAQGQKVSRFLAWSY 296
>gi|310799024|gb|EFQ33917.1| hypothetical protein GLRG_09061 [Glomerella graminicola M1.001]
Length = 408
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 148/298 (49%), Gaps = 49/298 (16%)
Query: 50 RPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPT 109
R +D+ D A +LT+ LL D GL +P+ +L P VPNR NYI W++ LL S
Sbjct: 14 RGNLDFNDPAAMMQLTKTLLKRDFGLEVELPEDRLRPPVPNRHNYILWLKGLLDSTTYDD 73
Query: 110 TSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELI 169
+ R KV G DIGTGA+CIYPLLG + WSF +D+ ++ A+KNV+ N + +
Sbjct: 74 SDR---KVVGLDIGTGASCIYPLLGCTQRLWSFFATDIDPKSINCAKKNVELNNLQNRIS 130
Query: 170 EIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229
+ + P DE +D S F + P
Sbjct: 131 VVARTPQDRLVP-----------LDELGVD-------------SLVFVM--------TNP 158
Query: 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
P F +S ++ P T+C G P EMV +GGE +F+ R++E+
Sbjct: 159 P-------------FYTSEKDMVDSAKQKSRPPSTACTGAPVEMVTAGGEVSFVGRMLEE 205
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP 346
S+ L++ +WYTSM G++S+L+ + LR+ + TEFVQG +T RW +AWSF P
Sbjct: 206 SLVLRERVQWYTSMFGKQSSLEEFVGVLREKAIDNYAITEFVQGNKTRRWAIAWSFGP 263
>gi|94499206|ref|ZP_01305744.1| hypothetical protein RED65_10469 [Bermanella marisrubri]
gi|94428838|gb|EAT13810.1| hypothetical protein RED65_10469 [Oceanobacter sp. RED65]
Length = 315
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 157/354 (44%), Gaps = 77/354 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P HP+N + +N DF L YP +P VF ++ + ID++D A L LL H
Sbjct: 4 KPQHHPRNAH-KNGYDFDALCQSYPQLKPHVFINQYSKQTIDFSDSQAVIALNTALLRHH 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANCI 129
+ +N W IP G LCP +P R++YIH++ DLL ++N P V DIGTGA+CI
Sbjct: 63 YNINEWSIPKGFLCPAIPGRADYIHYLADLLKETNNNKPAFKN----VTALDIGTGASCI 118
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
Y LLG + W V SD I+ + +DN+ +
Sbjct: 119 YSLLGNRIYDWKMVASD----------------------IDPKSIDNANAII-------- 148
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
++N +S +D + S F ++ + E FD +CNP
Sbjct: 149 -----KANQALSNQIDCRLQTSEKYIFR----------------NIIHNDEYFDITLCNP 187
Query: 250 PFFESMEEA---------------GLNPKTSC---GGTPEEMVCSGGERAFITRIIEDSV 291
PF ES+E+ N K+ GG E+ C GGE +F+ +I++S
Sbjct: 188 PFHESIEQGMSGTQRKWNNLNKSKDRNKKSEVLNFGGQNAELWCKGGELSFVKNMIKESR 247
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+ + W+TS++ +K N+ L L+K K + QG +AWSF+
Sbjct: 248 SYSKQVLWFTSLISKKDNVSKLKLALKKANAIETKVIKMEQGNKISRFIAWSFL 301
>gi|398930703|ref|ZP_10664768.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM48]
gi|398165013|gb|EJM53137.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM48]
Length = 340
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 165/357 (46%), Gaps = 78/357 (21%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N++ + DF L P + FV + G+ ID+ A R R LL +G
Sbjct: 30 SLHPRNRH-QGHYDFPALIKSAPELKKFVIINPYGKESIDFASPEAVRVFNRALLKSFYG 88
Query: 75 L-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIY 130
+ +W IP LCP VP R++Y+H++ DLL+S +IP G VK DIG GANC+Y
Sbjct: 89 IAHWDIPADYLCPPVPGRADYVHFLADLLASGNDGVIP----RGAAVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F+GSD+ A+ A+ + SN +++ I++R+ N +
Sbjct: 145 PLIGYSDYRWQFLGSDIDATAIAAAKAIIASN-GLNKAIQVRQQSNPKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++ E+FD +CNPP
Sbjct: 193 ----------------------------------------ILTGLLESAERFDLTMCNPP 212
Query: 251 FFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
F S++EA P + GG E+ C GGE F+T+++ +SV +
Sbjct: 213 FHASLDEATRGSTRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEVRFVTQLVSESVQV 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
Q W++++V + SNL + + L K G + E QGQ +AW+F A++
Sbjct: 273 AQQVLWFSTLVSKASNLPAIQAALNKAGALDSQVVEMGQGQKQSRFVAWTFQTKAQQ 329
>gi|403413801|emb|CCM00501.1| predicted protein [Fibroporia radiculosa]
Length = 503
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 169/372 (45%), Gaps = 75/372 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA--------------- 60
+HP+N Y +NPPDF LA YP +P++ YS G ID+ D +A
Sbjct: 1 MHPRNPY-QNPPDFQQLADAYPPLKPYLVYSYHG-VTIDFMDESAQRSDSSQMGCRVLIY 58
Query: 61 ---------TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
R LT LL D + IP+ ++CP VPNR NYI W++D++ + I +
Sbjct: 59 PPYSIIETQNRRLTEALLYRDFQVTINIPEDRICPPVPNRLNYILWLQDVVDATAIAEPT 118
Query: 112 RNGDKVKGFDIGTGANCIYPLLGASL---------LGWSFV---GSDMTDVALEWAEKNV 159
+ K+ G D+ Y L + L WS V G N
Sbjct: 119 DSERKISGIDMS-----FYNLSSSGLPFSPSLDFCCNWSVVTHRGLASLSFTSSLLSGNR 173
Query: 160 KSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLP 219
NP + E +S S + ++ ++ D + +++PS S +L
Sbjct: 174 LFNPDVDE----------KSLESARFNVRRNNLDDRITV-------VKSKPSGSMLLHL- 215
Query: 220 AGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEE 272
+S+ G +G FDF +CNPPF+ + EE P C G E
Sbjct: 216 --FESNSDG-----ASTSNGVHFDFTMCNPPFYRNREEILRSAEAKEFGPAAVCTGADVE 268
Query: 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ 332
M+ GGE +F+ R++++SV ++ RWYTSM+G+ S+L +++ LR V TEFVQ
Sbjct: 269 MIAPGGEVSFVGRMVQESVEIRTKCRWYTSMLGKLSSLTEIVTLLRVHHVDNYACTEFVQ 328
Query: 333 GQTCRWGLAWSF 344
G+T RW +AWSF
Sbjct: 329 GRTRRWAIAWSF 340
>gi|398915846|ref|ZP_10657506.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM49]
gi|398175897|gb|EJM63636.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM49]
Length = 343
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 164/354 (46%), Gaps = 78/354 (22%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ ++HP+N++ + DF L P + FV + G+ ID+ A R R LL
Sbjct: 27 EKASLHPRNRH-QGRYDFPTLIKSAPELKKFVIINPYGKESIDFASPEAVRVFNRALLKS 85
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP VP R++Y+H++ DLL+S +IP G VK DIG GAN
Sbjct: 86 FYGIAHWDIPADYLCPPVPGRADYVHFLADLLASGNDGVIP----RGAAVKVLDIGMGAN 141
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
C+YPL+G S W F+GSD+ A+ A+ + SN +++ I++R+ N +
Sbjct: 142 CVYPLIGYSDYRWHFLGSDIDATAIAAAKAIIASN-GLNKAIQVRQQSNPKQ-------- 192
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+L ++ E FD +C
Sbjct: 193 -------------------------------------------ILTDLLESAECFDLTMC 209
Query: 248 NPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDS 290
NPPF S++EA P + GG E+ C GGE F+T+++ +S
Sbjct: 210 NPPFHASLDEATRGSTRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEVRFVTQLVSES 269
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
V + Q W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 270 VQVAQQVLWFSTLVSKASNLPAIQTALKKAGVLDSQVVEMGQGQKQSRFVAWTF 323
>gi|310778972|ref|YP_003967305.1| 23S rRNA m(6)A-1618 methyltransferase [Ilyobacter polytropus DSM
2926]
gi|309748295|gb|ADO82957.1| 23S rRNA m(6)A-1618 methyltransferase [Ilyobacter polytropus DSM
2926]
Length = 299
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 159/354 (44%), Gaps = 77/354 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
++ +++ +HPKN + + +F LL P + ++ + G ID++D L +
Sbjct: 2 KKIKKKGELHPKNPH-KGKYNFKLLVKNLPELKKYLKKNPRGEETIDFSDNKGVILLNKA 60
Query: 68 LLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGA 126
LL + + NW IP G LCP +P R++YIH+I LL R G VK DIGTGA
Sbjct: 61 LLKTYYDIDNWDIPKGFLCPPIPGRADYIHYIAGLLKG------KRKG--VKVLDIGTGA 112
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G+ W FV S++ ++E A+K V SN + I ++ N E+
Sbjct: 113 NCIYPIIGSQSYNWDFVASEIDPKSIENAKKIVNSNKVLKNKITLKLQKNREN------- 165
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ G++ ++FD +
Sbjct: 166 --------------------------------------------IFEGIIEKNDKFDLTM 181
Query: 247 CNPPFFESMEEA---------GLNPKT-------SCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S+E+A LN + + GG E+ C GGER F+ ++ E+S
Sbjct: 182 CNPPFHASLEDALKANKRKVNNLNKENKKVKKGLNFGGQKAELWCPGGERLFLKKMAEES 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS++ K N+K L K+G +K E QGQ LAW+F
Sbjct: 242 LRFSSQVTWFTSLISNKDNIKPTQKLLYKLGAKDIKILEMSQGQKISRILAWTF 295
>gi|402699501|ref|ZP_10847480.1| 23S rRNA mA1618 methyltransferase [Pseudomonas fragi A22]
Length = 338
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 164/350 (46%), Gaps = 72/350 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+P++HP+N++ + DF L S+ P FV + G+ ID+ + A R R LL
Sbjct: 28 KPSLHPRNRH-QGRYDFPQLISVCPELAEFVIINPYGKESIDFANPTAVRVFNRALLKAF 86
Query: 73 HGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+G+ +W IP LCP VP R++Y+H++ DLL+S R G V+ DIG GANC+YP
Sbjct: 87 YGIAHWDIPADYLCPPVPGRADYVHFLADLLASMNDGEIPR-GQNVRVLDIGMGANCVYP 145
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G S W F+G+++ A++ A+ V+SN +++ I +R N +
Sbjct: 146 LIGHSEYRWQFLGTEVDPTAVKAAKAIVQSN-GLNKAISLRLQPNPQK------------ 192
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+L+ ++ E+FD +CNPPF
Sbjct: 193 ---------------------------------------ILLDLLESTERFDLTMCNPPF 213
Query: 252 FESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
S++EA P + GG E+ C GGE+ F+T++I +SV +
Sbjct: 214 HASLDEATRGSERKWRALGKADPKRKLPVLNFGGQAAELWCEGGEQRFVTQLIRESVHVA 273
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W++ +V + SNL + + L+K G + + QG +AW+F
Sbjct: 274 RQILWFSVLVSKASNLPAIQTALKKAGARESQVVDMSQGNKQSRFVAWTF 323
>gi|448241226|ref|YP_007405279.1| ribosomal RNA large subunit methyltransferase F [Serratia
marcescens WW4]
gi|445211590|gb|AGE17260.1| ribosomal RNA large subunit methyltransferase F [Serratia
marcescens WW4]
Length = 321
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 70/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ PFV + G +D+ D A +
Sbjct: 2 EKKKTFPQQKSGLHPRNRHRSRY-DFPALIASCPALAPFVKPNAWGDVSVDFADPAAVKM 60
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 61 LNRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKGVAILDV 119
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+L A+ V+ NP + + +R
Sbjct: 120 GVGANCIYPIVGLREYGWRFTGSEIDPVSLNSAKMIVEMNPTLRNSVRLR---------- 169
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + + + G++ E+F
Sbjct: 170 ---------LQKQPEL--------------------------------IFSGIIGAAEKF 188
Query: 243 DFCICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA P + GG E+ C GGE AF+ ++
Sbjct: 189 DATLCNPPFHASEQEARASTRRKLHKLGKGEVADKPVQNFGGKNNELWCEGGEEAFVRKM 248
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ +SV W+TS++ + + L + L+ G +T E QGQ +AW+F
Sbjct: 249 VAESVGKANNCLWFTSLISKNTTLPAIYHALKVAGAAEGRTIEMAQGQKISRFVAWTF 306
>gi|399925920|ref|ZP_10783278.1| 23S rRNA mA1618 methyltransferase [Myroides injenensis M09-0166]
Length = 302
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 165/357 (46%), Gaps = 75/357 (21%)
Query: 7 RRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
++ + + +H +NK+++ +F L ++ P E ++ + G ID+ A L +
Sbjct: 2 KQGKSTQKKLHERNKHNQ-LYNFDKLKNVVPELEAYIIKNPSGVDTIDFAKPEAVVLLNK 60
Query: 67 VLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDI 122
+L+ D+ L +W +P LCP +P R++YIH+I DLL+ + IPT G ++K D+
Sbjct: 61 AILMKDYKLTFWEMPKTNLCPPIPGRADYIHYIADLLAEGNNGKIPT----GKQIKILDL 116
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GAN IYP++G + GW+FVGS++ V+++ A + +NPH+ + IR+
Sbjct: 117 GIGANVIYPIIGVAEYGWTFVGSEVDVVSIKTASHIIDNNPHLKNNVIIRQ--------- 167
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+S N+ L ++ + E F
Sbjct: 168 -----------------------------QTSKRNI-------------LKNIIGEREYF 185
Query: 243 DFCICNPPFFESMEEAGL---------------NPKTSCGGTPEEMVCSGGERAFITRII 287
D ICNPPFF+S EE P + G E+ C GGE+AFIT I
Sbjct: 186 DVVICNPPFFKSREEVLAKTTQKLKNLGKEIIGKPIQNFSGQNNELWCEGGEKAFITNYI 245
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S K+ W+T++V K +LK L + L++ V+ QG LAW F
Sbjct: 246 YESKHFKRQAVWFTTLVSNKEHLKPLQALLKRSETAEVRVITMEQGNKVSRILAWRF 302
>gi|229588592|ref|YP_002870711.1| putative SAM-dependent methyltransferase [Pseudomonas fluorescens
SBW25]
gi|259491700|sp|C3K6G1.1|RLMF_PSEFS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|229360458|emb|CAY47315.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 339
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 164/351 (46%), Gaps = 78/351 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N+++ DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRHTGRY-DFQALIKTTPELAQFVIINPYGKESIDFASPDAVRVFNRALLKSFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIY 130
+ W IP LCP VP R++Y+H++ DLL+S IP G VK DIG GANC+Y
Sbjct: 89 IQHWDIPADYLCPPVPGRADYVHFLADLLASVNDGKIP----RGSIVKVLDIGMGANCVY 144
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G W+F+GS++ +A+ A+ V+SN +S++I++R+ N +
Sbjct: 145 PLIGYMEYRWNFLGSEVDPIAVAAAKAIVQSN-DLSKVIQLRQQTNPKQ----------- 192
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L+ ++ GE+FD +CNPP
Sbjct: 193 ----------------------------------------ILLSLLEPGERFDLTMCNPP 212
Query: 251 FFESMEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVAL 293
F SM+EA +PK GG E+ C GGE F+T++I +S
Sbjct: 213 FHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAELWCEGGEARFVTQLIAESAHF 272
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++++V + SNL + + L+K GV + E QGQ +AW+F
Sbjct: 273 AHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQGQKQSRFVAWTF 323
>gi|167622038|ref|YP_001672332.1| putative SAM-dependent methyltransferase [Shewanella halifaxensis
HAW-EB4]
gi|205829620|sp|B0TM80.1|RLMF_SHEHH RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|167352060|gb|ABZ74673.1| protein of unknown function DUF890 [Shewanella halifaxensis
HAW-EB4]
Length = 380
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 165/386 (42%), Gaps = 92/386 (23%)
Query: 2 GSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNAT 61
G K + + +HP+N +++ DF L + + + + FV + G ID+ D A
Sbjct: 39 GQKNTAVKAQTSKPLHPRNVHNKGY-DFPALIAAFAALKSFVKPNPYGNLSIDFADPQAV 97
Query: 62 RELTRVLL-LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN----GDK 116
+ L LL LH +W IP G LCP +P R++YIH++ DLL+ + +S+ G +
Sbjct: 98 KMLNAALLKLHYDVEHWDIPAGFLCPPIPGRADYIHYVADLLA---VKKSSKKRVPKGPR 154
Query: 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176
VK DIGTGAN IYPLLG GWSFVGSD+ +++ A++ SNP I+ R
Sbjct: 155 VKVLDIGTGANVIYPLLGIQSYGWSFVGSDVDPLSIANAQQVFASNPAIAARFNSR---- 210
Query: 177 SESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236
L A+ +H GV+
Sbjct: 211 -----------------------------------------LQTNAKHVFH------GVI 223
Query: 237 RDGEQFDFCICNPPFFESMEEAG-------------------LNPKTSC----------- 266
E+FD +CNPPF S+ EA P S
Sbjct: 224 EPNERFDITLCNPPFHASLAEASEGTARKLKNLAANRAKSSEAKPLRSTKPVVTKTETPL 283
Query: 267 --GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324
GG E+ C GGE F+ +I +S W+T++V +K NLK + L KV
Sbjct: 284 NFGGQKAELWCEGGELQFLQTMISESHEFASQCLWFTTLVSKKENLKPAKALLAKVKAEE 343
Query: 325 VKTTEFVQGQTCRWGLAWSFVPPARK 350
VK E QG LAW+F+ P ++
Sbjct: 344 VKEMEMHQGNKITRVLAWTFLKPEQR 369
>gi|418294948|ref|ZP_12906825.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
gi|379066308|gb|EHY79051.1| 23S rRNA mA1618 methyltransferase [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
Length = 331
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 162/356 (45%), Gaps = 72/356 (20%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
R + +HP+N+++ DF L + P + V + G+ ID+ + A R R
Sbjct: 14 RAEPGKAVLHPRNRHTGRY-DFPALIAGSPELDEHVIVNPYGKQSIDFANPEAVRVFNRA 72
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGA 126
LL +G+ W IP G LCP VP R++Y+H + DLL + + R G ++ DIGTGA
Sbjct: 73 LLRQFYGIKHWDIPPGYLCPPVPGRADYMHGLADLLGQDEDRSIPR-GSAIRALDIGTGA 131
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYPL+G GW F GSD+ AL A + +N +++ I++R+ ++ +
Sbjct: 132 NCIYPLIGNREYGWHFTGSDIDATALASARTIISAN-GLAKAIDLRQQ-------TVPKQ 183
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ V E + D++ +
Sbjct: 184 IFKGLVLPEDHFDLT--------------------------------------------L 199
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S EA P + GG E+ C GGE AFI R+ E+
Sbjct: 200 CNPPFHASQAEASSGSQRKWRNLGKLDPSRKLPALNFGGQAAELWCEGGEAAFIARMAEE 259
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
SV W++++V + +N+ L+++L+++G ++T + QGQ +AWS++
Sbjct: 260 SVLFAGQVYWFSTLVSKGANVAPLVTRLKRLGARQIRTLDMAQGQKKSRFVAWSYL 315
>gi|338175295|ref|YP_004652105.1| ribosomal RNA large subunit methyltransferase F [Parachlamydia
acanthamoebae UV-7]
gi|336479653|emb|CCB86251.1| ribosomal RNA large subunit methyltransferase F [Parachlamydia
acanthamoebae UV-7]
Length = 291
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 165/350 (47%), Gaps = 76/350 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E + +H +N++ E P DF LL FV + G ID+T+ A + L + +L
Sbjct: 3 ELKTELHLRNRHRE-PYDFKLLIKNCSDLAKFVATNSYGNESIDFTNPIAVKILNKAILR 61
Query: 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLL---SSNIIPTTSRNGDKVKGFDIGTGAN 127
+ + W IP+ LCP +P R++Y+H+I DLL + IIP G K+ DIG GAN
Sbjct: 62 VFYNITWDIPEHFLCPPIPGRADYVHYIADLLGVSNRGIIP----QGKKISILDIGVGAN 117
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW+FVG+D+ A+ + +K N +++E IEIR
Sbjct: 118 CIYPLIGYREYGWNFVGTDIDPRAI--SNGIIKQN-NLTEAIEIR--------------- 159
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ SSS+ F G++ D FD +C
Sbjct: 160 --------------------LQKSSSNIFK----------------GILSDNSAFDVSMC 183
Query: 248 NPPFFESMEEA---------GLNPKTSC---GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
NPPF + EA L KT GG E+ C GGE AFI R+IE+S+ +K
Sbjct: 184 NPPFHATPSEARAGTKRKWKNLRIKTDALNFGGQSNELWCPGGEVAFIKRMIEESIHVK- 242
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+W+T++V + S+L + L KV V+T QGQ +AW+F+
Sbjct: 243 -CKWFTTLVSKASSLSNIYQALEKVKPLEVRTINMGQGQKKSRIVAWTFI 291
>gi|77362209|ref|YP_341783.1| SAM-dependent methyltransferase [Pseudoalteromonas haloplanktis
TAC125]
gi|76877120|emb|CAI89337.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Pseudoalteromonas haloplanktis TAC125]
Length = 348
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 164/355 (46%), Gaps = 76/355 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+N++ N D LL +P+ F+ + G ID++D A + L + LL
Sbjct: 45 RAKLHPRNQHL-NGYDLDLLTEQHPALSAFIITTPAGTKSIDFSDNKAVKTLNQALLKAH 103
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANC 128
+ +++W IP LCP +P R +YIH++ DLL+ + IPT G +VK DIGTGAN
Sbjct: 104 YNVDFWDIPQHNLCPPIPGRVDYIHYLADLLADDNQTQIPT----GRQVKVLDIGTGANL 159
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YPL G W F G+D+ A++ A+ +I + +N + +T
Sbjct: 160 VYPLTGGHEYNWHFTGTDIDPAAIKVAK-------------QIAQFNNLK--------IT 198
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
K ++ +N + GV+ + + +CN
Sbjct: 199 LKQQKNAAN---------------------------------IFKGVINSKDLYHLTLCN 225
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF S E+A G P ++ GG E+ C GGE FI+ +I++S A+ +
Sbjct: 226 PPFHASSEDAVKGSERKWKNLGKAPSSTLNFGGQNNELWCEGGEVQFISNMIKESAAVAE 285
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V +K N+ L +L++ + K + QGQ +AWS+ A +
Sbjct: 286 QVMWFTSLVSKKDNIAALEQELKQHPIAQYKIVDMAQGQKVSRFIAWSYFDKATR 340
>gi|205829584|sp|Q3IBW7.2|RLMF_PSEHT RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
Length = 310
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 164/355 (46%), Gaps = 76/355 (21%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +HP+N++ N D LL +P+ F+ + G ID++D A + L + LL
Sbjct: 7 RAKLHPRNQHL-NGYDLDLLTEQHPALSAFIITTPAGTKSIDFSDNKAVKTLNQALLKAH 65
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANC 128
+ +++W IP LCP +P R +YIH++ DLL+ + IPT G +VK DIGTGAN
Sbjct: 66 YNVDFWDIPQHNLCPPIPGRVDYIHYLADLLADDNQTQIPT----GRQVKVLDIGTGANL 121
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YPL G W F G+D+ A++ A+ +I + +N + +T
Sbjct: 122 VYPLTGGHEYNWHFTGTDIDPAAIKVAK-------------QIAQFNNLK--------IT 160
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
K ++ +N + GV+ + + +CN
Sbjct: 161 LKQQKNAAN---------------------------------IFKGVINSKDLYHLTLCN 187
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF S E+A G P ++ GG E+ C GGE FI+ +I++S A+ +
Sbjct: 188 PPFHASSEDAVKGSERKWKNLGKAPSSTLNFGGQNNELWCEGGEVQFISNMIKESAAVAE 247
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V +K N+ L +L++ + K + QGQ +AWS+ A +
Sbjct: 248 QVMWFTSLVSKKDNIAALEQELKQHPIAQYKIVDMAQGQKVSRFIAWSYFDKATR 302
>gi|295096506|emb|CBK85596.1| 23S rRNA m(6)A-1618 methyltransferase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 284
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 147/326 (45%), Gaps = 74/326 (22%)
Query: 37 PSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYI 95
P + F+ + G P +++ D A + L + LL H +G+ W IPDG LCP VP R++Y+
Sbjct: 9 PELQDFIVQTPAGEPSVNFADPLAVKTLNKALLAHFYGVTHWDIPDGFLCPPVPGRADYV 68
Query: 96 HWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152
H + DLL+ + ++P + DIGTGAN IYPL+GA W F GS++ A
Sbjct: 69 HHLADLLADDNGGVVPK------QATVLDIGTGANLIYPLIGAHEYQWRFTGSEIGAEAF 122
Query: 153 EWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSS 212
A+ + +NP +S + +R+ + +P++
Sbjct: 123 ASAQAIINANPGLSRAVRLRR---------------------------------QKDPAA 149
Query: 213 SSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA-------------G 259
+ G++ EQ+D +CNPPF +S A
Sbjct: 150 ------------------IFNGIIHKNEQYDATLCNPPFHDSAASARAGSERKRRNLGQA 191
Query: 260 LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319
+ + GG +E+ C GGE AFI R+I +S + +W+T++V R NL L L
Sbjct: 192 EDGALNFGGQQQELWCEGGEVAFILRMIAESKGFGRQVKWFTTLVSRGDNLPPLYRALTD 251
Query: 320 VGVTIVKTTEFVQGQTCRWGLAWSFV 345
VG V E QGQ +AW+F+
Sbjct: 252 VGAVRVVKKEMAQGQKQSRFIAWTFM 277
>gi|399546791|ref|YP_006560099.1| ribosomal RNA large subunit methyltransferase F [Marinobacter sp.
BSs20148]
gi|399162123|gb|AFP32686.1| Ribosomal RNA large subunit methyltransferase F [Marinobacter sp.
BSs20148]
Length = 317
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 163/370 (44%), Gaps = 78/370 (21%)
Query: 1 MGSKKRRRRREERPT---IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTD 57
M + RR + P +HP+N + + DF L P P+V + G I++ D
Sbjct: 1 MSTLYRRENNQTEPNRKGLHPRNLHKQGY-DFPSLIKSCPPLAPYVDKNAYGNLSIEFAD 59
Query: 58 FNATRELTRVLLLHDHG-LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDK 116
A + L LL + ++W IP+G LCP +P R++YIH+I +LL PTT++ +
Sbjct: 60 PLAVKALNTALLKRYYSVIDWDIPEGALCPPIPGRADYIHYIAELLGVGE-PTTNQANTQ 118
Query: 117 --VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174
+ DIGTGAN IYPLL + GW VGSD+ +LE + +NP + + +R
Sbjct: 119 PSISLLDIGTGANGIYPLLACQIYGWQCVGSDINRQSLENVASIIANNPTLKDRFALR-- 176
Query: 175 DNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234
Q + N + G
Sbjct: 177 -----------------AQRDKNH--------------------------------IFDG 187
Query: 235 VVRDGEQFDFCICNPPFFESMEEA---------------GLNPKTSC----GGTPEEMVC 275
+++ GE FD +CNPPF S EEA G TS GG+ E+ C
Sbjct: 188 IIKTGEFFDVSVCNPPFHASHEEALTASQRKISNLARHRGEQKTTSSTLNFGGSGAELWC 247
Query: 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT 335
GGER F+ ++I++S A RW+TS+V + N+K + K+G V+ E QG
Sbjct: 248 KGGERLFLKKLIKESQAFSTQCRWFTSLVSKIDNVKPAKKLILKLGAVDVQEIEMKQGNK 307
Query: 336 CRWGLAWSFV 345
LAW+F+
Sbjct: 308 TTRILAWTFI 317
>gi|260778493|ref|ZP_05887385.1| predicted SAM-dependent methyltransferase [Vibrio coralliilyticus
ATCC BAA-450]
gi|260604657|gb|EEX30952.1| predicted SAM-dependent methyltransferase [Vibrio coralliilyticus
ATCC BAA-450]
Length = 347
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 154/345 (44%), Gaps = 82/345 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG-LNWWIPDGQLCP 86
+F L + P + +V + G I+++D A + L + LL H +G ++W IP G LCP
Sbjct: 43 NFNQLVNATPELKQYVVKNPKGEASINFSDPQAVKLLNKALLAHHYGVISWDIPKGYLCP 102
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LLS + + V FD+G GANCIYP++GA+ GW +VGSD
Sbjct: 103 PIPGRADYIHRLAELLSKD---GKQVKHESVNAFDVGVGANCIYPIVGATQYGWDYVGSD 159
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ V+ VK++ I+ E N + GH++
Sbjct: 160 IDPVS-------VKNSNQIA----------------------------EENPVLKGHVEC 184
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA-------- 258
+ S F GV+++ E FD CNPPF S++EA
Sbjct: 185 RLQTQSRYFFK----------------GVIKENEYFDVTTCNPPFHRSVQEAQQGTERKL 228
Query: 259 -GLN------------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
LN P + GG E+ C GGE AFI + +S W
Sbjct: 229 KKLNRSKQQRGQASERGKVKASPILNFGGQNAELWCPGGEAAFIKNLAFESRDFAHQVLW 288
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+++++ +K N++++ L K G V+ E QGQ +AW+F
Sbjct: 289 FSTLISKKENVRWMRKNLEKAGAKEVQVVEMSQGQKVSRFIAWTF 333
>gi|398951387|ref|ZP_10674035.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM33]
gi|398156774|gb|EJM45188.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM33]
Length = 341
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 72/342 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ ++HP+N++ + DF L P + FV + G+ ID+ A R R LL
Sbjct: 24 REKASLHPRNRH-QGRYDFPALIKSTPELKKFVIINPYGKESIDFASPEAVRVFNRALLK 82
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCI 129
+G+ +W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+
Sbjct: 83 SFYGIAHWDIPADYLCPPVPGRADYVHFLADLLASGNDGAIPR-GAAVKVLDIGMGANCV 141
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
YPL+G S W F+GSD+ A+ A+ ++SN +++ I++R+ N +
Sbjct: 142 YPLIGYSDYRWQFLGSDIDATAIAAAKAIIQSN-GLNKAIQVRQQSNPKQ---------- 190
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
+L G++ E+FD +CNP
Sbjct: 191 -----------------------------------------ILTGLLESAERFDLTMCNP 209
Query: 250 PFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
PF S++EA P + GG E+ C GGE F+T+++ +SV
Sbjct: 210 PFHASLDEATRGSTRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEVRFVTQLVSESVQ 269
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ 334
+ Q W++++V + SNL + + L K G + E QGQ
Sbjct: 270 VSQQVLWFSTLVSKASNLPAIQTALSKAGALDSRVVEMGQGQ 311
>gi|398874515|ref|ZP_10629721.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM74]
gi|398194768|gb|EJM81832.1| putative SAM-dependent methyltransferase [Pseudomonas sp. GM74]
Length = 342
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 160/345 (46%), Gaps = 78/345 (22%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ ++HP+N++ + DF L P + FV + G+ ID+ A R R LL
Sbjct: 26 KEKASLHPRNRH-QGRYDFPALIKSAPELKKFVIINPYGKESIDFASPEAVRVFNRALLK 84
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP VP R++Y+H++ DLL+S +IP G VK DIG GA
Sbjct: 85 SFYGIAHWDIPADYLCPPVPGRADYVHFLADLLASGNDGVIP----RGAAVKVLDIGMGA 140
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NC+YPL+G S W F+GSD+ A+ A+ ++SN +++ I++R+ N +
Sbjct: 141 NCVYPLIGYSDYRWHFLGSDIDGTAIAAAKAIIQSN-GLNKAIQVRQQSNPKQ------- 192
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+L G++ E+FD +
Sbjct: 193 --------------------------------------------ILTGLLESTERFDLTM 208
Query: 247 CNPPFFESMEEAGLN-----------------PKTSCGGTPEEMVCSGGERAFITRIIED 289
CNPPF S++EA P + GG E+ C GGE F+T++I +
Sbjct: 209 CNPPFHASLDEATRGSTRKWRALGKADPKRKLPVLNFGGQAAELWCEGGEVRFVTQLISE 268
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ 334
S + Q W++++V + SNL + + L K G + E QGQ
Sbjct: 269 SAHVAQQVLWFSTLVSKASNLPAIQNALTKAGALDSRVVEMGQGQ 313
>gi|385787839|ref|YP_005818948.1| putative SAM-dependent methyltransferase [Erwinia sp. Ejp617]
gi|310767111|gb|ADP12061.1| putative SAM-dependent methyltransferase [Erwinia sp. Ejp617]
Length = 309
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 160/348 (45%), Gaps = 69/348 (19%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +H +N++ DFA L + +P PFV + G ID+ + +A + L + LL H
Sbjct: 6 EKNVLHLRNRH-RGRYDFAALIASHPPLAPFVAVNHWGSESIDFANPDAVKALNQALLHH 64
Query: 72 -DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
H +W IP G LCP VP R++YIH + DLL+ + R ++ D+G GAN IY
Sbjct: 65 FYHIAHWDIPAGFLCPPVPGRADYIHHLADLLAEDNRRVVPR---EINVLDVGCGANLIY 121
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G S W F GS++ + A+ A + NP ++ I +R+ + ++
Sbjct: 122 PLIGHSEYQWRFTGSEVNERAMAAANAIIAGNPRLNRAIRLRRQKDGQA----------- 170
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ GV+ E + +CNPP
Sbjct: 171 ----------------------------------------MFSGVIHKNELYHATLCNPP 190
Query: 251 FFESMEEA-----------GLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F S +A GL+ + + GG +E+ C GGE AFI R+IE+S++ +
Sbjct: 191 FHASAVDAHQGSQRKLRNLGLDRHSPLNFGGQQDELWCEGGEIAFIRRMIEESISFGRQC 250
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V RK NL L L + V +T + QGQ +AWSF+
Sbjct: 251 VWFTSLVSRKENLPELWRALEEADVAAARTIDMAQGQKQSRFIAWSFM 298
>gi|425773602|gb|EKV11945.1| hypothetical protein PDIP_54270 [Penicillium digitatum Pd1]
gi|425775819|gb|EKV14069.1| hypothetical protein PDIG_34700 [Penicillium digitatum PHI26]
Length = 433
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 163/333 (48%), Gaps = 69/333 (20%)
Query: 24 ENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQ 83
+N DFA LA F + + ++D+TD A R+LT LL D L IP+ +
Sbjct: 9 KNDIDFAALALQSRDFAKHLKLN----GQLDFTDPAAVRQLTTTLLQQDFHLKVEIPEDR 64
Query: 84 LCPTVPNRSNYIHWIEDLLSSNI--IPTTSRNGDKVKGFDIGTGANCIYPLLG-ASLLGW 140
LCP VPNR NYI W++DLL S + +V G DIGTG IYPLLG A+ GW
Sbjct: 65 LCPPVPNRLNYILWLQDLLDSTAGGLKEGYDRDREVVGLDIGTGCVGIYPLLGCATRPGW 124
Query: 141 SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDM 200
F+ +D+ N++++ H L +N ES I S
Sbjct: 125 KFLATDIDS-------NNIRTSQHNVAL------NNLESRIQIVSS-------------- 157
Query: 201 SGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ-FDFCICNPPFF------- 252
+P+ GP L + + G Q DF +CNPPF+
Sbjct: 158 --------DPT----------------GP--LFPLEKLGRQRLDFTMCNPPFYTSSNELK 191
Query: 253 ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKF 312
+S E+ P ++C G EMV GGE AF+ ++I++S+ L++ +WYTSM+G+ S++
Sbjct: 192 QSAEQKEREPFSACTGAEVEMVTRGGELAFVKQMIDESLRLRERIQWYTSMLGKLSSINV 251
Query: 313 LISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
L+ L K G+T TEF QG +T RW +AWS+
Sbjct: 252 LVETLIKHGITNFAVTEFEQGSKTKRWAVAWSW 284
>gi|37679672|ref|NP_934281.1| SAM-dependent methyltransferase [Vibrio vulnificus YJ016]
gi|81757697|sp|Q7MLD9.1|RLMF_VIBVY RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|37198417|dbj|BAC94252.1| predicted SAM-dependent methyltransferase [Vibrio vulnificus YJ016]
Length = 364
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 154/364 (42%), Gaps = 85/364 (23%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL-LH 71
R +H +NK+ + DFA L PS PFV + G I ++D A + L + LL H
Sbjct: 42 RAGLHSRNKH-QGRYDFAKLTQALPSLAPFVIKNPKGEASISFSDSTAVKMLNKALLSAH 100
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
NW IP G LCP +P R++YIH + +LL + T +KV+ DIG GAN IYP
Sbjct: 101 YQVANWDIPAGYLCPPIPGRADYIHRLAELLEGEVKGTFPH--EKVQALDIGVGANAIYP 158
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++ W + GSD+ ++E A++ SNP + +E++
Sbjct: 159 IIAICDYRWRYTGSDVDPKSIESAQRIADSNPVLQGQLELK------------------- 199
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+QD+S + G++ + F CNPPF
Sbjct: 200 LQDQSQH--------------------------------IFQGIIGPTDYFHVTTCNPPF 227
Query: 252 FESMEEAGL------------------------------NPKTSCGGTPEEMVCSGGERA 281
S +EA P + GG E+ C GGE +
Sbjct: 228 HASAQEAAFGTQRKLDNLAANRLKKGVTAKAGSQKISKNKPILNFGGQNSELWCQGGESS 287
Query: 282 FITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341
F+ R+ +S W++++V +K N++ L +L K+GV ++ E QGQ +A
Sbjct: 288 FLKRMANESERFAHQVLWFSTLVSKKDNVRPLRKQLEKLGVRSIRVVEMSQGQKVSRFVA 347
Query: 342 WSFV 345
WSF+
Sbjct: 348 WSFM 351
>gi|429094739|ref|ZP_19157264.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
dublinensis 1210]
gi|426740223|emb|CCJ83377.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
dublinensis 1210]
Length = 309
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 158/356 (44%), Gaps = 75/356 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
+P +HP+N++ DF L P+ +V S G P ID+ D A + L + LL H
Sbjct: 3 RKPGLHPRNRHHSRY-DFDALTQRCPALGAYVRLSPAGEPTIDFADPLAVKTLNQALLAH 61
Query: 72 DHGLNWW-IPDGQLCPTVPN-RSNYIHW--IEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
+G+ W IPDG LCP VP R+ I W ++ +P + DIG GAN
Sbjct: 62 FYGVQQWDIPDGFLCPPVPGARTTCIIWRICWPRATAGAVPA------QASVLDIGVGAN 115
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYPL+G GW F G+D ++ A+ A + +NP ++ + +R+ + TP
Sbjct: 116 CIYPLIGQHEYGWRFTGTDTSEEAIRSASAIIDANPGLNRAVRLRR----QKTP------ 165
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ FN GV+ E++D +C
Sbjct: 166 -------------------------DAIFN----------------GVIHKNERYDATLC 184
Query: 248 NPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF +S + A GL + GG +E+ C GGE FITR+I++S
Sbjct: 185 NPPFHDSADAASAGNARKRRNLGLAADSGLNFGGQQQELWCEGGEVGFITRMIDESKLFA 244
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
+ W+T++V + NL L L + G V E QGQ +AWSF+ A++
Sbjct: 245 RQVLWFTTLVSKGDNLPQLYRALEQAGAVKVVKKEMAQGQKQSRFIAWSFMDTAQR 300
>gi|358369483|dbj|GAA86097.1| DUF890 domain protein [Aspergillus kawachii IFO 4308]
Length = 429
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 161/338 (47%), Gaps = 69/338 (20%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
+N Y + DF LA P F ++ ++D++D +A R+LT+ LL D L
Sbjct: 5 RNIYKDEV-DFTALALQSPEFAKYL----KANGQLDFSDPDAVRQLTKSLLQRDFELKVE 59
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD---KVKGFDIGTGANCIYPLLGA 135
IP+ +LCP VPNR NYI W++DLL + N D +V G DIGTG IYPLLG
Sbjct: 60 IPENRLCPPVPNRLNYILWLQDLLDTTG-DEYRDNYDPDREVIGLDIGTGCCSIYPLLGC 118
Query: 136 SLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
S+ W FV +D+ + + + V +N + IEI + D + + L
Sbjct: 119 SMRPHWRFVATDIDNDNIRTSRDTVSAN-KLDSRIEIIQTDPKDELIPLDTKL------- 170
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
N+D + DF +CNPPF+ S
Sbjct: 171 --NVD-----------------------------------------RLDFTMCNPPFYAS 187
Query: 255 MEEAGLN-------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
+E + P T+C G EMV +GGE AFITR+IE+S+ L++ WYT+M+G+
Sbjct: 188 RDELIASAEAKERPPFTACTGAEVEMVTTGGEIAFITRMIEESLHLRERVIWYTTMLGKL 247
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
++ LI L + TEFVQG +T RW +AWS+
Sbjct: 248 GSVSVLIETLLEHKNNNYAVTEFVQGNKTRRWAIAWSW 285
>gi|149190842|ref|ZP_01869106.1| putative SAM-dependent methyltransferase [Vibrio shilonii AK1]
gi|148835302|gb|EDL52275.1| putative SAM-dependent methyltransferase [Vibrio shilonii AK1]
Length = 352
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 77/344 (22%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L P + +V + G I ++D + + L R LL +G+N+W IP+ LCP
Sbjct: 47 DFVKLTQALPELKDYVISNPKGEATIMFSDPASVKLLNRALLKAYYGINFWDIPESYLCP 106
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGD-KVKGFDIGTGANCIYPLLGASLLGWSFVGS 145
+P R++Y+H + + L +++ S KVK DIGTGANCIYP++GA+ W+++GS
Sbjct: 107 PIPGRADYVHRLNEWLQYDLMREQSEKARLKVKALDIGTGANCIYPIVGATRHHWNWIGS 166
Query: 146 DMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMD 205
D+ V++ A++ V +N ++ IEIR N+
Sbjct: 167 DIDPVSVSCAKEIVNNNDKLARKIEIRHQQNNNH-------------------------- 200
Query: 206 EEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA------- 258
+ V+ + F CNPPF +SME+A
Sbjct: 201 -------------------------IFASVIAPDDFFVATTCNPPFHKSMEDAQKGTERK 235
Query: 259 -----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
LN K + GG E+ C GGE AF+ + ++S W++
Sbjct: 236 NNNLSKNQKSRGQSGATKLNGKLNFGGQNAELWCPGGEEAFVLNMAQESKDFASQVIWFS 295
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+++ +K N++ L +L K+GV+ + E QGQ LAW+F+
Sbjct: 296 TLLSKKDNIRPLRKRLEKLGVSEIVIQEMAQGQKKSRFLAWTFM 339
>gi|121590790|ref|ZP_01678118.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153818128|ref|ZP_01970795.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227081767|ref|YP_002810318.1| putative SAM-dependent methyltransferase [Vibrio cholerae M66-2]
gi|229508441|ref|ZP_04397944.1| hypothetical protein VCF_000007 [Vibrio cholerae BX 330286]
gi|262161759|ref|ZP_06030777.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
cholerae INDRE 91/1]
gi|298498303|ref|ZP_07008110.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|379741462|ref|YP_005333431.1| 23S rRNA mA1618 methyltransferase [Vibrio cholerae IEC224]
gi|421332746|ref|ZP_15783224.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1046(19)]
gi|424586543|ref|ZP_18026124.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1030(3)]
gi|424599109|ref|ZP_18038292.1| ribosomal RNA large subunit methyltransferase F [Vibrio Cholerae
CP1044(17)]
gi|424601831|ref|ZP_18040977.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1047(20)]
gi|254807098|sp|C3LMU1.1|RLMF_VIBCM RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|121547353|gb|EAX57469.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|126511314|gb|EAZ73908.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227009655|gb|ACP05867.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229354395|gb|EEO19318.1| hypothetical protein VCF_000007 [Vibrio cholerae BX 330286]
gi|262028491|gb|EEY47146.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
cholerae INDRE 91/1]
gi|297542636|gb|EFH78686.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|378794972|gb|AFC58443.1| 23S rRNA mA1618 methyltransferase [Vibrio cholerae IEC224]
gi|395929353|gb|EJH40103.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1046(19)]
gi|395974374|gb|EJH83904.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1030(3)]
gi|395976615|gb|EJH86059.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1047(20)]
gi|408042331|gb|EKG78387.1| ribosomal RNA large subunit methyltransferase F [Vibrio Cholerae
CP1044(17)]
Length = 362
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D + + L + LL+ +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALLVLHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL N +V+ DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKG---NPQLNHSQVRALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGANERYTVTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+++++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFSTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSF 348
>gi|195024980|ref|XP_001985976.1| GH21111 [Drosophila grimshawi]
gi|193901976|gb|EDW00843.1| GH21111 [Drosophila grimshawi]
Length = 302
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 66/343 (19%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
+HP+N P++ LA + F +G+ +++ + RELT++LLL G
Sbjct: 10 AMHPRNPL-RTAPNYTKLAIKHKDFRHVCELELNGKVSLNFRNERTLRELTKMLLLEYFG 68
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L G L PT+ R NYI W+EDLL+ + D V+G DIG G++CIY LLG
Sbjct: 69 LQVDFAPGSLVPTLALRLNYILWLEDLLAPQKL-------DAVRGIDIGCGSSCIYSLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A W + + +E+A +NV N + LIE+ + +S
Sbjct: 122 AKKNMWQMLALESKQTNIEYARQNVARN-ELQSLIEVYAQPDKQSI-------------- 166
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
S + + E+ A ++++H FC+CNPPFF+S
Sbjct: 167 -----FSSYFESES-----------AATKANFH----------------FCLCNPPFFDS 194
Query: 255 MEEAGLN-----------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303
P G+ EE+ C+GGE F+ RI+++S K+ ++SM
Sbjct: 195 NAANPFGGNTRNPQRRPAPNNVRTGSAEELTCAGGEVQFVQRIVDESEMYKERVLIFSSM 254
Query: 304 VGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
+G K+N+ ++ LR+ ++ V +TEF QG T RW +AWS P
Sbjct: 255 LGVKANVPKIMDYLRERKISNVCSTEFHQGHTTRWAVAWSHQP 297
>gi|406868547|gb|EKD21584.1| DUF890 domain protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 428
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 149/297 (50%), Gaps = 49/297 (16%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
++D+++ + ++LT+ LL D GL +P +LCP VPNR NYI WI+ LL S T
Sbjct: 32 QLDFSNPESVQQLTKSLLRRDFGLEITLPPDRLCPPVPNRLNYILWIQSLLDSTSDSYTD 91
Query: 112 RNG--DKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISEL 168
R +V G D+GTGA+CIYPLLG S W F G+D D + ++A+KNV+ N + +
Sbjct: 92 RYDPEREVLGLDVGTGASCIYPLLGCSQRPNWRFAGTDTDDRSFQFAKKNVQDNGLQTRI 151
Query: 169 IEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228
++ + P Q D + M P +S+ L A A S
Sbjct: 152 KLLQTQPDGLLLPLDQMGF------DSIDFTMCN------PPFYTSTTELLASAASKQR- 198
Query: 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIE 288
PPF T+C G+ EMV GGE F +R+I+
Sbjct: 199 --------------------PPF------------TACTGSESEMVTPGGEVTFASRMID 226
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+S+ LK +WYTSM+G+ S+++ L+ KL+ GV TEFVQG +T RW + WSF
Sbjct: 227 ESLVLKDRVQWYTSMLGKFSSIEVLVKKLQGSGVDNYAVTEFVQGSKTRRWAIGWSF 283
>gi|332293350|ref|YP_004431959.1| rRNA (adenine-N(6)-)-methyltransferase [Krokinobacter sp. 4H-3-7-5]
gi|332171436|gb|AEE20691.1| rRNA (adenine-N(6)-)-methyltransferase [Krokinobacter sp. 4H-3-7-5]
Length = 281
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 149/342 (43%), Gaps = 76/342 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP NK + P F L P+V + G ID+T+ A EL R +LL D+ L
Sbjct: 1 MHPNNK-NIGPYLFKQLRKANKELAPYVLETDRGIQTIDFTNPKAVLELNRAILLSDYSL 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
NW+ IP+G LCP +P R +Y+H++ D + + V G DIGTGAN +YPLL
Sbjct: 60 NWYEIPEGYLCPAIPGRVDYLHYLNDFIGK----------EDVHGLDIGTGANFVYPLLA 109
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
S+ W G D+ A+ A ++ N H+ LT QD
Sbjct: 110 GSVFNWKMKGVDIDAKAIRNANTILEKNTHLKGF------------------LTATYQQD 151
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+N + G + GE +DF +CNPPF+ S
Sbjct: 152 RAN---------------------------------IFTGAILPGEHYDFTMCNPPFYSS 178
Query: 255 MEEA---------GLNPKT---SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
++A GL K + G E+ C+GGE FI R++++SV K W+T+
Sbjct: 179 EKDAFKATKEKSKGLKLKEVERNFAGQSNELWCNGGEALFIKRMVKESVNFKSQVGWFTT 238
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+V + +L + +L K+ +T + QG LAW F
Sbjct: 239 LVSKSEHLAKIKKQLEKLNAE-HRTVDMSQGNKKSRFLAWRF 279
>gi|237837693|ref|XP_002368144.1| hypothetical protein TGME49_032750 [Toxoplasma gondii ME49]
gi|211965808|gb|EEB01004.1| hypothetical protein TGME49_032750 [Toxoplasma gondii ME49]
gi|221488591|gb|EEE26805.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221509090|gb|EEE34659.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 383
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 165/401 (41%), Gaps = 124/401 (30%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP++++S N D+ +L YP + F+ + +D T A EL++ +++ +GL
Sbjct: 1 MHPRSRHSTNSVDYGVLGEKYPELKKFLAPKKYAGFSLDMTTTMAIYELSKAIMMEFYGL 60
Query: 76 NWWIP--DGQ-LCPTVPNRSNYIHWIEDLL--------------SSNIIPTTSRN----- 113
+ +P DG L P +P+R+NYIH I DLL + + + R+
Sbjct: 61 KFELPLHDGHFLVPCIPSRANYIHHIADLLVDVEKEGALYLALHGRDGVSSAVRHAVQEA 120
Query: 114 ----GDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELI 169
G +K DIG GANC+YPLLG + GW+FVGSD+++ +LE A +NV N
Sbjct: 121 QPLRGKHIKVLDIGVGANCVYPLLGCTEYGWTFVGSDISERSLELARENVNLN------- 173
Query: 170 EIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229
++ H+ + +P+ S
Sbjct: 174 ---------------------------GLEPCVHLRHQQDPAKFFS-------------- 192
Query: 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
GVV +GE F +CNPPF ES ++ + P E+VC GGE FI +I +
Sbjct: 193 ----GVVENGELFALSMCNPPFHESTDQVNVCPFRVLEAQNHEVVCEGGELNFIMSMIRE 248
Query: 290 SVALKQTFRWYTSMVGRKSNL----KFLISKLRKVG------------------------ 321
S A F W+TS+V R S L KFL +LR
Sbjct: 249 SRAFCSQFMWFTSLVARASTLKTVKKFLWEELRAFADSPGQVEHMRTRWKSTIAGQRGQT 308
Query: 322 ------------------VTIVKTTEFVQGQTCRWGLAWSF 344
VT + E QG+ RW + W+F
Sbjct: 309 SSGDEAQISLSTIGVPLRVTEFRCKELYQGKQTRWVICWTF 349
>gi|313205182|ref|YP_004043839.1| 23S rRNA m(6)a-1618 methyltransferase [Paludibacter propionicigenes
WB4]
gi|312444498|gb|ADQ80854.1| 23S rRNA m(6)A-1618 methyltransferase [Paludibacter propionicigenes
WB4]
Length = 345
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 161/361 (44%), Gaps = 75/361 (20%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
++++ E+ +HP+NK+ E DF L P +V ++ ID+ + A +
Sbjct: 25 EQKKEHPAEKVVLHPRNKHRERY-DFDKLIVACPELAKYVKLNQYNDQSIDFANPKAIKW 83
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKG 119
L + LL H +G+++W IP G LCP +P R++YIH DLL+++ IPT G K+K
Sbjct: 84 LNKALLKHFYGIDYWDIPTGYLCPPIPGRADYIHHAADLLAASNDGHIPT----GSKIKC 139
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIG GA+C++P++G GW+F+GSD AL+ A K + N + + +++R +N +
Sbjct: 140 MDIGVGASCVFPIIGVKEYGWTFIGSDTDVKALDSANKIINYNHFLLKSVDLRLQENPKD 199
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
+ G++
Sbjct: 200 ---------------------------------------------------IFHGIMERN 208
Query: 240 EQFDFCICNPPFFESMEEA---------GLN------PKTSCGGTPEEMVCSGGERAFIT 284
E D ICNPPF S EEA LN P + GG E+ C GGE F+
Sbjct: 209 EPVDITICNPPFHASAEEAQEGTLRKLSSLNHKKITTPVLNFGGQSNELWCEGGEGRFVR 268
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+I S W+T+ + ++S+L + L+ G VKT QG +AW+F
Sbjct: 269 DMIRQSKQFGSNCFWFTTQISKQSHLPGIYEALKHAGALEVKTISMTQGTKVSRIVAWTF 328
Query: 345 V 345
+
Sbjct: 329 L 329
>gi|260901822|ref|ZP_05910217.1| putative methyltransferase YbiN [Vibrio parahaemolyticus AQ4037]
gi|308108063|gb|EFO45603.1| putative methyltransferase YbiN [Vibrio parahaemolyticus AQ4037]
Length = 375
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 152/347 (43%), Gaps = 82/347 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + PS FV + G I+++D NA + L + LL + +++W IP+ LCP
Sbjct: 70 DFKKLIASEPSLASFVIKNPKGEDSINFSDPNAVKMLNKALLAAYYNIDFWDIPEHYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LL + V+ D+G GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYIHRVAELLDGEV--KGKYRHQNVRALDVGVGANCIYPIVGVTQYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +++ A V+ N ++ IE+ VQ S +
Sbjct: 188 VDPKSIDSAANIVERNVALNGKIEL--------------------VQQMSESHI------ 221
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
Y G V++ ++FD CNPPF S E+A +
Sbjct: 222 -------------------YRG------VIKPNDRFDVTTCNPPFHRSAEDAAMGSQRKL 256
Query: 261 ----------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
P + GG E+ C GGE AFI R+ +S A
Sbjct: 257 DNLKANQRKKGVKQQNSPVKQGKPTLNFGGQNAELWCEGGEAAFIRRMANESQAFSSQVL 316
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWSF+
Sbjct: 317 WFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKISRFMAWSFM 363
>gi|126664451|ref|ZP_01735435.1| predicted SAM-dependent methyltransferase [Marinobacter sp. ELB17]
gi|126630777|gb|EBA01391.1| predicted SAM-dependent methyltransferase [Marinobacter sp. ELB17]
Length = 317
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 165/370 (44%), Gaps = 78/370 (21%)
Query: 1 MGSKKRRRRREERPT---IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTD 57
M + RR + + +P +HP+N++ + DF L P+V + G I++ D
Sbjct: 1 MSTLYRREKNQTKPDRKGLHPRNRHKQGY-DFPSLVKSCAPLAPYVHKNAYGNLSIEFAD 59
Query: 58 FNATRELTRVLLLHDHG-LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDK 116
A + L LL + ++W IP+G LCP +P R++YIH+I +LL PTT++ +
Sbjct: 60 PLAVKALNTALLKRYYSVIDWDIPEGALCPPIPGRADYIHYIAELLGVGE-PTTNQANTQ 118
Query: 117 --VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174
+ DIGTGAN IYPLL + GW VGSD+ +LE + +NP + + +R
Sbjct: 119 PSISLLDIGTGANGIYPLLACQIYGWQCVGSDINRQSLENVASIIANNPTLKDRFALR-- 176
Query: 175 DNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234
Q + N H+ E G
Sbjct: 177 -----------------TQHDKN-----HIFE---------------------------G 187
Query: 235 VVRDGEQFDFCICNPPFFESMEEA---------------GLNPKTSC----GGTPEEMVC 275
+++ GE FD +CNPPF S EEA G TS GG E+ C
Sbjct: 188 IIQTGEFFDVSVCNPPFHASQEEALTSSQRKINNLTRHRGEQKITSSTLNFGGLGAELWC 247
Query: 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT 335
GGER F+ ++I++S RW+TS+V + N+K + K+G V+ E QG
Sbjct: 248 KGGERLFLKKLIKESQVFSTQCRWFTSLVSKIDNVKPAKKLILKLGAIDVQEIEMKQGNK 307
Query: 336 CRWGLAWSFV 345
LAW+F+
Sbjct: 308 TTRILAWTFI 317
>gi|452985920|gb|EME85676.1| hypothetical protein MYCFIDRAFT_41101 [Pseudocercospora fijiensis
CIRAD86]
Length = 448
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 163/349 (46%), Gaps = 74/349 (21%)
Query: 14 PTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFN---ATRELTRVLLL 70
P + Y DF LA + P F S G+ R W DF+ + LT+ LL
Sbjct: 5 PPKKRRTHYYSQDVDFEALAKVDPDFAAL---SATGK-REGWIDFHDPEVVQTLTKTLLK 60
Query: 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD--KVKGFDIGTGANC 128
HD GL +PD +LCP VP R NY+ WI+DLL + T + +V G DIG GA+C
Sbjct: 61 HDFGLTLSLPDDRLCPPVPVRWNYVRWIQDLLDTTYDSYTDYYDEEREVVGLDIGVGASC 120
Query: 129 IYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IY LL +S W G+D+ +LE A++NVKSN ++E I +++ ++ + E
Sbjct: 121 IYALLACSSRPEWRMAGTDIDAHSLEHAKRNVKSN-DLAERIRLKQTKSTAPLIPLDE-- 177
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+GV E+ DF +
Sbjct: 178 ---------------------------------------------MGV----EELDFIMT 188
Query: 248 NPPFFESMEE-----------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
NPPF+ S ++ G P C G+ EM+CS G+ F+TRI+ +S+ L+
Sbjct: 189 NPPFYSSEQDFLNSYKDPGKPTGEAPSAVCVGSKNEMICSDGDVGFVTRILGESLKLRAR 248
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+WYT+ + + S+L+ +++KL++ G+ T G +T R+ +AWSF
Sbjct: 249 VQWYTAFLSKMSSLQQIVAKLKENGIENFAVTSLHPGHRTKRYAVAWSF 297
>gi|242810215|ref|XP_002485535.1| DUF890 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716160|gb|EED15582.1| DUF890 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 442
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 157/345 (45%), Gaps = 77/345 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H + DF LA P F + ++D++D ++ R+LT+ LL D L
Sbjct: 1 MHSSRNIYKREIDFRELALTSPEFAKRL----KSNDQLDFSDPDSVRQLTKSLLERDFKL 56
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD-------KVKGFDIGTGANC 128
+PD +LCP +PNR NYI W++DL I T+SR G +V G DIGTG
Sbjct: 57 AVDLPDDRLCPPIPNRFNYILWLQDL-----IDTSSRTGTDQYDPNREVLGLDIGTGCCA 111
Query: 129 IYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYPLLG +S WSF+ +D+ + ++K V N + + I I + + +
Sbjct: 112 IYPLLGCSSRPRWSFIATDIDSKNVSLSQKAVSDN-KLDDRIRIMQTNKDD--------- 161
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
P++ D E DF +C
Sbjct: 162 ------------------------------------------PLIPTDKLDVESLDFVMC 179
Query: 248 NPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
NPPF+ES +E P ++C G EM+ GGE AFI ++ S+ LK WY
Sbjct: 180 NPPFYESEDELLSSAEAKSRPPFSACTGAAVEMITPGGEVAFIESLLTQSLTLKTQVLWY 239
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ-TCRWGLAWSF 344
TSM G+ S++ ++ KL G++ TEFVQG+ T RW + WSF
Sbjct: 240 TSMFGKLSSVSIIVQKLLDNGISNWAVTEFVQGKGTRRWAVGWSF 284
>gi|372269859|ref|ZP_09505907.1| 23S rRNA mA1618 methyltransferase [Marinobacterium stanieri S30]
Length = 285
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 150/338 (44%), Gaps = 76/338 (22%)
Query: 31 LLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL-LHDHGLNWWIPDGQLCPTVP 89
+L + YP +V + G ID+ D A + L LL LH +W IP+G LCP +P
Sbjct: 1 MLLNSYPPLAQYVSKNAYGNLSIDFADPLAVKALNAALLKLHYSIDDWDIPEGALCPPIP 60
Query: 90 NRSNYIHWIEDLLSSNIIPTTSRNGDKVKG---FDIGTGANCIYPLLGASLLGWSFVGSD 146
R +YIH+I DLL + D G DIGTGAN IYPLL L GW VGSD
Sbjct: 61 GRVDYIHYIADLLGFG--APDANQADTSPGITLLDIGTGANGIYPLLACQLYGWQCVGSD 118
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ N +S +++ +I P +QE T ++ D+ +
Sbjct: 119 I----------NPQSLDNVAAII--------AKNPGLQERFTLRTQHDKHH--------- 151
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA-------- 258
+ G+++ GE FD +CNPPF S E+A
Sbjct: 152 ------------------------IFDGIIQAGEFFDVSVCNPPFHASQEDALKGTRRKL 187
Query: 259 -----------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
+ K + GG E+ C GGE+AF+ ++I++S A RW+TS+V +
Sbjct: 188 NNLARNRGDKTATSAKLNFGGQAAELWCKGGEQAFLKKMIKESQAFSTQCRWFTSLVSKA 247
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
NLK +RK+G V+ E QG LAW+F+
Sbjct: 248 ENLKPATKLIRKLGAVEVREIEMKQGNKITRILAWTFI 285
>gi|443696698|gb|ELT97345.1| hypothetical protein CAPTEDRAFT_204861 [Capitella teleta]
Length = 453
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 160/340 (47%), Gaps = 71/340 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y PDF LAS Y F+ G+ +D+ + LT LL D L
Sbjct: 7 MHPRNPYRIKKPDFKALASKYEEFKTHCTTDSKGQVHLDFKKPECLKALTVALLKDDFDL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ +P +L PTVP R NYI W+ED+ P + DIGTGA+CIYPLL A
Sbjct: 67 DLDLPIDRLIPTVPLRLNYILWLEDVFGEGT-PV-------LNAIDIGTGASCIYPLLAA 118
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
W F+ S+ +A NVK N +++ L+ +
Sbjct: 119 KKNQWHFLASESDATNFTYATDNVKKN-NLAHLVRV------------------------ 153
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ-FDFCICNPPFFES 254
+P+ P+G +L ++ + E+ FDFC+CNPPFF S
Sbjct: 154 ------------VQPTE------PSG---------MLCDILMNNEESFDFCMCNPPFFGS 186
Query: 255 MEEA-GL---------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
EA G+ P ++ +P+E V GGE F+ ++I DS+ LK R YTSM+
Sbjct: 187 NLEAWGMLTSRSESRPEPLSANTASPQESVVPGGEVQFVKQMISDSLVLKNRIRVYTSML 246
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
G+KS+L L +L + ++ TTE QG+T RW +AWSF
Sbjct: 247 GKKSSLSVLKEELSRCEISNTGTTELCQGRTMRWVIAWSF 286
>gi|417824895|ref|ZP_12471483.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE48]
gi|340046380|gb|EGR07310.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE48]
Length = 362
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 161/355 (45%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ P DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGPYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPKLNPSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ Q SL +
Sbjct: 165 VTEYGWSWVGSDVDPVSIQ------------------------------QASLIAQ---- 190
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 191 -SNSKLQGHIECRLQKNSQHIFN----------------GIIGANERYTVTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A +P+ + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|375265311|ref|YP_005022754.1| Ribosomal RNA large subunit methyltransferase F [Vibrio sp. EJY3]
gi|369840632|gb|AEX21776.1| Ribosomal RNA large subunit methyltransferase F [Vibrio sp. EJY3]
Length = 374
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 81/357 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N++ DF L + P + FV + +G I+++D A + L + LL + +
Sbjct: 60 LHERNQH-RGRYDFKKLTASEPGLKAFVIKNPNGEDSINFSDPKAVKMLNKALLAAHYDI 118
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+ LCP +P R++YIH + +LL + + V+ DIG GANCIYP++G
Sbjct: 119 EFWDIPEHYLCPPIPGRADYIHRVAELLDGEVKGKYPHHD--VRALDIGVGANCIYPIVG 176
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW + GSD+ ++E A+ V N ++ IE+ V+
Sbjct: 177 VTEYGWHYTGSDVDPKSIESAQAIVDGNVSLNGRIEL--------------------VRQ 216
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
S ++ Y G V++ E++D CNPPF S
Sbjct: 217 MSQANI-------------------------YRG------VIQPNERYDVTTCNPPFHRS 245
Query: 255 MEEAGL--------------------------NPKTSCGGTPEEMVCSGGERAFITRIIE 288
EEA + P + GG E+ C GGE AFI ++
Sbjct: 246 AEEAAMGSQRKVDNLRANQRKKGVKPARENTAKPTLNFGGQNAELWCEGGEAAFIRKMAN 305
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S A W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++
Sbjct: 306 ESQAFSAQVLWFTTLISKKENVRPMRKQLEKLGVKAIRVVEMSQGQKISRFIAWSYM 362
>gi|417319983|ref|ZP_12106529.1| 23S rRNA mA1618 methyltransferase [Vibrio parahaemolyticus 10329]
gi|328472946|gb|EGF43794.1| 23S rRNA mA1618 methyltransferase [Vibrio parahaemolyticus 10329]
Length = 375
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 152/347 (43%), Gaps = 82/347 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + PS FV + G I+++D NA + L + LL + +++W IP+ LCP
Sbjct: 70 DFKKLIASEPSLASFVIKNPKGEDSINFSDPNAVKMLNKALLTAYYDIDFWDIPEHYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LL + V+ D+G GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYIHRLAELLDGEV--KGKYRHQNVRALDVGVGANCIYPIVGVTQYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +++ A V E N+ ++G ++
Sbjct: 188 VDPKSIDSAANIV-----------------------------------ERNVALNGKIEF 212
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ S S + GV++ ++FD CNPPF S E+A +
Sbjct: 213 VQQMSESHIYR----------------GVIQPNDRFDVTTCNPPFHRSAEDAAMGSQRKL 256
Query: 261 ----------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
P + GG E+ C GGE AFI R+ +S A
Sbjct: 257 DNLKANQRKKGVKSQNSPVKQGKPTLNFGGQNAELWCEGGEAAFIRRMANESQAFSSQVL 316
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWSF+
Sbjct: 317 WFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKISRFMAWSFM 363
>gi|326429170|gb|EGD74740.1| hypothetical protein PTSG_06103 [Salpingoeca sp. ATCC 50818]
Length = 732
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 161/353 (45%), Gaps = 63/353 (17%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H KN+Y DF L+ +P + + G+ D+++ + RELT LL D L
Sbjct: 1 MHIKNRYRTRK-DFLALSDRFPQLKQYFVTRNRGKKCFDFSNPDGVRELTIALLKDDFDL 59
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKV--KGFDIGTGANCIYPLL 133
+P +L PTVP + NYI WIEDLL T +N V G DIG GA+CIYPLL
Sbjct: 60 TVDLPHDRLVPTVPQKLNYILWIEDLLF------TLKNDSPVDTAGIDIGCGASCIYPLL 113
Query: 134 GASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
G W F+ +++ + E+A N+K + ++ + D GK+
Sbjct: 114 GVRRNPSWRFIATEIDQRSFEFATTNIKQSGLQRQITAVLNTD------------AGKT- 160
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ G +D+ + +P GA+ F +CNPPF+
Sbjct: 161 -------LCGVVDDALDA-------VPQGARV-------------------FTMCNPPFY 187
Query: 253 E-------SMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
+ + + + P+T+ E GGE F+ +II DS L WYT+M+G
Sbjct: 188 DIGVTAAPARKASRPPPRTTSTAASHESQTEGGEVGFVRKIISDSQLLGTRVSWYTAMLG 247
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPHVAE 358
KS+L+ L+ + T V F QG+T RWGLAW+F+P A P V +
Sbjct: 248 CKSSLRPLLDIIAATDATFVTHAVFKQGRTFRWGLAWTFLPLAAFKDDPTVTQ 300
>gi|449143937|ref|ZP_21774755.1| 23S rRNA mA1618 methyltransferase [Vibrio mimicus CAIM 602]
gi|449080261|gb|EMB51177.1| 23S rRNA mA1618 methyltransferase [Vibrio mimicus CAIM 602]
Length = 364
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 160/356 (44%), Gaps = 82/356 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 51 LHPRNRH-RGQYDFPALIKVVPELQSHVIKNPKGQSTINFADPIAVKLLNKALLALHYGV 109
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++YIH DLL + P + + +V DIG GANCIYP++G
Sbjct: 110 TYWDIPQGFLCPPIPGRADYIHRAADLLIKDC-PDLAHS--QVTALDIGVGANCIYPIVG 166
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GWS+VGSD+ V+++ A V SNP + IE R ++S S
Sbjct: 167 ATEYGWSWVGSDIDPVSIKQASLIVNSNPKLQGKIECRLQNDSHS--------------- 211
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GV+ +GE++ CNPPF S
Sbjct: 212 ------------------------------------IFKGVIGEGERYTLTTCNPPFHAS 235
Query: 255 MEEAGLNP-------------------KTSC-------GGTPEEMVCSGGERAFITRIIE 288
+ EA +TS GG E+ C GGE AFI ++
Sbjct: 236 LTEAQQGTLRKQNNLQANQRKKGRTTVRTSAQTAALNFGGQKAELWCPGGEAAFIGKMAV 295
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 296 ESQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVIEMAQGQKISRFIAWSF 351
>gi|433657531|ref|YP_007274910.1| Ribosomal RNA large subunit methyltransferase F [Vibrio
parahaemolyticus BB22OP]
gi|432508219|gb|AGB09736.1| Ribosomal RNA large subunit methyltransferase F [Vibrio
parahaemolyticus BB22OP]
Length = 375
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 153/347 (44%), Gaps = 82/347 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P+ E FV + G I+++D NA + L + LL + +++W IP+ LCP
Sbjct: 70 DFKKLIASEPALESFVIKNPKGEDSINFSDPNAVKILNKALLTAYYDIDFWDIPEHYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LL + V+ D+G GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYIHRVAELLDGEV--KGKYRHQNVRALDVGVGANCIYPIVGVTQYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +++ A V+ N ++ IE+ VQ S +
Sbjct: 188 VDPKSIDSAANIVERNVALNGKIEL--------------------VQQMSESHI------ 221
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
Y G V++ ++FD CNPPF S E+A +
Sbjct: 222 -------------------YRG------VIQPNDRFDVTTCNPPFHRSAEDAAMGSQRKL 256
Query: 261 ----------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
P + GG E+ C GGE AFI R+ +S A
Sbjct: 257 DNLKANQRKKGVKSQNSPVKQGKPTLNFGGQNAELWCEGGEAAFIRRMANESQAFSSQVL 316
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWSF+
Sbjct: 317 WFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKISRFMAWSFM 363
>gi|153830644|ref|ZP_01983311.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148873885|gb|EDL72020.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 362
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A V+SN + IE R +NS+
Sbjct: 165 VTEYGWSWVGSDVDSVSIQQASLIVQSNSKLQGHIECRLQNNSQH--------------- 209
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G++ GE++ CNPPF S
Sbjct: 210 ------------------------------------IFQGIIGAGERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A +P+ + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+++++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFSTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|261252863|ref|ZP_05945436.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417952773|ref|ZP_12595824.1| 23S rRNA mA1618 methyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260936254|gb|EEX92243.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342818380|gb|EGU53246.1| 23S rRNA mA1618 methyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 348
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 83/366 (22%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +H +N + + DFA L P + V + G I+++D A + L + LL H
Sbjct: 30 KAGLHKRNVH-QGRYDFAKLVQALPELQKHVIKNPKGDASINFSDPLAVKLLNKALLAHH 88
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + W IP G LCP +P R++YIH + +LL+S S ++V+ DIG GANCIYP
Sbjct: 89 YNVTSWDIPQGYLCPPIPGRADYIHRLAELLTSE---AKSLKHNQVRALDIGVGANCIYP 145
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++GA+ GW ++ SD ++ VDNS +
Sbjct: 146 IVGATQYGWHYIASD----------------------VDAESVDNSNRIAN--------- 174
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
N + G ++ + S F G+++ E +D CNPPF
Sbjct: 175 ----QNSVLEGRIECRLQSDSRHFFK----------------GIIKPNEFYDVTTCNPPF 214
Query: 252 FESMEEA---------------------------GLNPKTSCGGTPEEMVCSGGERAFIT 284
+S++EA +P + GG E+ C GGE AFI
Sbjct: 215 HKSLQEAQQGTERKIKNLAANKSKRGQAGNQAQSARSPILNFGGQKAELWCPGGEAAFIK 274
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ +S Q W++S++ +K N++++ L K G + V+ E QGQ +AW+F
Sbjct: 275 NMAFESREFSQQVLWFSSLISKKENVRWMCKNLEKAGASEVRIVEMSQGQKISRFIAWTF 334
Query: 345 VPPARK 350
A +
Sbjct: 335 KSEAER 340
>gi|15641622|ref|NP_231254.1| SAM-dependent methyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|153822219|ref|ZP_01974886.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|229511487|ref|ZP_04400966.1| hypothetical protein VCE_002896 [Vibrio cholerae B33]
gi|229518627|ref|ZP_04408070.1| hypothetical protein VCC_002652 [Vibrio cholerae RC9]
gi|229607848|ref|YP_002878496.1| SAM-dependent methyltransferase [Vibrio cholerae MJ-1236]
gi|254848733|ref|ZP_05238083.1| SAM-dependent methyltransferase [Vibrio cholerae MO10]
gi|255744954|ref|ZP_05418904.1| RNA large subunit methyltransferase F [Vibrio cholera CIRS 101]
gi|360035507|ref|YP_004937270.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae O1
str. 2010EL-1786]
gi|417813673|ref|ZP_12460326.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-49A2]
gi|417817410|ref|ZP_12464039.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HCUF01]
gi|418334639|ref|ZP_12943559.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-06A1]
gi|418338266|ref|ZP_12947160.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-23A1]
gi|418346179|ref|ZP_12950945.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-28A1]
gi|418349943|ref|ZP_12954674.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-43A1]
gi|418355974|ref|ZP_12958693.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-61A1]
gi|419826607|ref|ZP_14350107.1| hypothetical protein VCCP10336_2223 [Vibrio cholerae CP1033(6)]
gi|421317596|ref|ZP_15768165.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1032(5)]
gi|421321403|ref|ZP_15771956.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1038(11)]
gi|421325194|ref|ZP_15775719.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1041(14)]
gi|421328861|ref|ZP_15779371.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1042(15)]
gi|421336355|ref|ZP_15786817.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1048(21)]
gi|421339348|ref|ZP_15789783.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-20A2]
gi|421347615|ref|ZP_15797993.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-46A1]
gi|422891820|ref|ZP_16934186.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-40A1]
gi|422902926|ref|ZP_16937911.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-48A1]
gi|422906809|ref|ZP_16941623.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-70A1]
gi|422913662|ref|ZP_16948173.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HFU-02]
gi|422925866|ref|ZP_16958885.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-38A1]
gi|423145190|ref|ZP_17132788.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-19A1]
gi|423149864|ref|ZP_17137182.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-21A1]
gi|423153679|ref|ZP_17140869.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-22A1]
gi|423156767|ref|ZP_17143864.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-32A1]
gi|423160336|ref|ZP_17147280.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-33A2]
gi|423165143|ref|ZP_17151885.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-48B2]
gi|423731175|ref|ZP_17704482.1| hypothetical protein VCHC17A1_1838 [Vibrio cholerae HC-17A1]
gi|423758550|ref|ZP_17712545.1| hypothetical protein VCHC50A2_1697 [Vibrio cholerae HC-50A2]
gi|423894002|ref|ZP_17726816.1| hypothetical protein VCHC62A1_1968 [Vibrio cholerae HC-62A1]
gi|423929557|ref|ZP_17731212.1| hypothetical protein VCHC77A1_1752 [Vibrio cholerae HC-77A1]
gi|424002621|ref|ZP_17745699.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-17A2]
gi|424006408|ref|ZP_17749381.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-37A1]
gi|424024388|ref|ZP_17764042.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-62B1]
gi|424027268|ref|ZP_17766874.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-69A1]
gi|424595191|ref|ZP_18034516.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1040(13)]
gi|424606792|ref|ZP_18045740.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1050(23)]
gi|424610617|ref|ZP_18049460.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-39A1]
gi|424613425|ref|ZP_18052217.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-41A1]
gi|424617410|ref|ZP_18056086.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-42A1]
gi|424622187|ref|ZP_18060699.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-47A1]
gi|424645156|ref|ZP_18082896.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-56A2]
gi|424652920|ref|ZP_18090305.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-57A2]
gi|424656744|ref|ZP_18094033.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-81A2]
gi|440709855|ref|ZP_20890507.1| RNA large subunit methyltransferase F [Vibrio cholerae 4260B]
gi|443503986|ref|ZP_21070948.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-64A1]
gi|443507884|ref|ZP_21074652.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-65A1]
gi|443511726|ref|ZP_21078368.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-67A1]
gi|443515281|ref|ZP_21081797.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-68A1]
gi|443519075|ref|ZP_21085476.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-71A1]
gi|443523969|ref|ZP_21090185.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-72A2]
gi|443531572|ref|ZP_21097586.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-7A1]
gi|443535362|ref|ZP_21101243.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-80A1]
gi|443538916|ref|ZP_21104770.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-81A1]
gi|449055939|ref|ZP_21734607.1| Ribosomal RNA large subunit methyltransferase F [Vibrio cholerae O1
str. Inaba G4222]
gi|81544878|sp|Q9KRM2.1|RLMF_VIBCH RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|9656126|gb|AAF94768.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|126520287|gb|EAZ77510.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|229343316|gb|EEO08291.1| hypothetical protein VCC_002652 [Vibrio cholerae RC9]
gi|229351452|gb|EEO16393.1| hypothetical protein VCE_002896 [Vibrio cholerae B33]
gi|229370503|gb|ACQ60926.1| hypothetical protein VCD_002762 [Vibrio cholerae MJ-1236]
gi|254844438|gb|EET22852.1| SAM-dependent methyltransferase [Vibrio cholerae MO10]
gi|255737425|gb|EET92820.1| RNA large subunit methyltransferase F [Vibrio cholera CIRS 101]
gi|340036159|gb|EGQ97135.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-49A2]
gi|340037133|gb|EGQ98108.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HCUF01]
gi|341622427|gb|EGS48085.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-70A1]
gi|341622475|gb|EGS48131.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-48A1]
gi|341623109|gb|EGS48676.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-40A1]
gi|341638110|gb|EGS62766.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HFU-02]
gi|341646921|gb|EGS71021.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-38A1]
gi|356418388|gb|EHH71986.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-06A1]
gi|356418978|gb|EHH72550.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-21A1]
gi|356423591|gb|EHH77034.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-19A1]
gi|356429694|gb|EHH82909.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-22A1]
gi|356429908|gb|EHH83117.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-23A1]
gi|356434552|gb|EHH87730.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-28A1]
gi|356440682|gb|EHH93622.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-32A1]
gi|356444439|gb|EHH97248.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-43A1]
gi|356447895|gb|EHI00682.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-33A2]
gi|356452472|gb|EHI05151.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-61A1]
gi|356452854|gb|EHI05527.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-48B2]
gi|356646661|gb|AET26716.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae O1
str. 2010EL-1786]
gi|395918014|gb|EJH28840.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1032(5)]
gi|395918255|gb|EJH29080.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1041(14)]
gi|395918397|gb|EJH29221.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1038(11)]
gi|395927395|gb|EJH38158.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1042(15)]
gi|395933366|gb|EJH44106.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1048(21)]
gi|395944296|gb|EJH54970.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-20A2]
gi|395944612|gb|EJH55285.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-46A1]
gi|395959584|gb|EJH70011.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-56A2]
gi|395960258|gb|EJH70635.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-57A2]
gi|395963253|gb|EJH73526.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-42A1]
gi|395971459|gb|EJH81126.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-47A1]
gi|408007719|gb|EKG45768.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-39A1]
gi|408013835|gb|EKG51528.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-41A1]
gi|408033049|gb|EKG69612.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1040(13)]
gi|408043781|gb|EKG79756.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1050(23)]
gi|408054420|gb|EKG89398.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-81A2]
gi|408608439|gb|EKK81837.1| hypothetical protein VCCP10336_2223 [Vibrio cholerae CP1033(6)]
gi|408624865|gb|EKK97800.1| hypothetical protein VCHC17A1_1838 [Vibrio cholerae HC-17A1]
gi|408636694|gb|EKL08823.1| hypothetical protein VCHC50A2_1697 [Vibrio cholerae HC-50A2]
gi|408655029|gb|EKL26155.1| hypothetical protein VCHC77A1_1752 [Vibrio cholerae HC-77A1]
gi|408655973|gb|EKL27080.1| hypothetical protein VCHC62A1_1968 [Vibrio cholerae HC-62A1]
gi|408846502|gb|EKL86608.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-37A1]
gi|408846570|gb|EKL86669.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-17A2]
gi|408870832|gb|EKM10099.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-62B1]
gi|408879543|gb|EKM18519.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-69A1]
gi|439974731|gb|ELP50894.1| RNA large subunit methyltransferase F [Vibrio cholerae 4260B]
gi|443431774|gb|ELS74322.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-64A1]
gi|443435561|gb|ELS81700.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-65A1]
gi|443439441|gb|ELS89152.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-67A1]
gi|443443489|gb|ELS96786.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-68A1]
gi|443447345|gb|ELT03996.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-71A1]
gi|443450092|gb|ELT10380.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-72A2]
gi|443456962|gb|ELT24359.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-7A1]
gi|443461533|gb|ELT32603.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-80A1]
gi|443465016|gb|ELT39676.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-81A1]
gi|448264978|gb|EMB02215.1| Ribosomal RNA large subunit methyltransferase F [Vibrio cholerae O1
str. Inaba G4222]
Length = 362
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 158/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D + + L + LL+ +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPISVKLLNKALLVLHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL N +V+ DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKG---NPQLNHSQVRALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGANERYTVTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+ +++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFRTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSF 348
>gi|153214686|ref|ZP_01949546.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115208|gb|EAY34028.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 362
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 161/355 (45%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPKLNLSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A V
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQANLIV----------------------------------- 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++R GE++ CNPPF S
Sbjct: 190 QSNSTLQGHIECRLQNNSQHIFN----------------GIIRAGERYTLTTCNPPFHAS 233
Query: 255 MEEA-------------------------GLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A +P+ + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTSSHPRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAEQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|255931919|ref|XP_002557516.1| Pc12g06780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582135|emb|CAP80305.1| Pc12g06780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 432
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 164/335 (48%), Gaps = 72/335 (21%)
Query: 24 ENPPDFALLASLYPSFEPFVFYSRDGRP--RIDWTDFNATRELTRVLLLHDHGLNWWIPD 81
+N DFA LA F ++ +P ++D+TD A R+LT LL D L IP+
Sbjct: 9 KNDIDFAALALQSRDF------AKHLKPNGQLDFTDPAAVRQLTTTLLQQDFHLKVDIPE 62
Query: 82 GQLCPTVPNRSNYIHWIEDLLSSNI--IPTTSRNGDKVKGFDIGTGANCIYPLLG-ASLL 138
+LCP VPNR NYI W++DLL S + +V G DIGTG IYPLLG A+
Sbjct: 63 DRLCPPVPNRLNYILWLQDLLDSTAEGLHEGYDRDREVVGLDIGTGCIGIYPLLGCATRP 122
Query: 139 GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNM 198
W+F+ + D N++++ H L +N ES I
Sbjct: 123 RWNFIATGDID------SNNIRTSQHNVAL------NNLESRIRI--------------- 155
Query: 199 DMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG-EQFDFCICNPPFF----- 252
S +GP L+ + + G ++ DF +CNPPF+
Sbjct: 156 -----------------------VHSDPNGP--LIPLEKLGCQKLDFTMCNPPFYTSPNE 190
Query: 253 --ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNL 310
+S E+ P ++C G EMV SGGE AF+ R+I++S+ L+ +WYTSM+G+ S++
Sbjct: 191 LKQSAEQKEREPYSTCTGAEVEMVTSGGEVAFVKRMIDESLQLRDRVQWYTSMLGKLSSI 250
Query: 311 KFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
L+ L K GVT TEF QG +T RW +AWS+
Sbjct: 251 NALVEMLIKHGVTNFAVTEFEQGSKTKRWAVAWSW 285
>gi|19115526|ref|NP_594614.1| DUF890 family protein [Schizosaccharomyces pombe 972h-]
gi|74626664|sp|O42662.2|MTT16_SCHPO RecName: Full=Putative methyltransferase-like protein C27D7.08c
gi|4539588|emb|CAA15827.2| DUF890 family protein [Schizosaccharomyces pombe]
Length = 385
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 149/310 (48%), Gaps = 65/310 (20%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
RID+ + +A R L + +L D+ L P+ +LCP VPNR+ YI +I DLLSS +
Sbjct: 15 RIDFWNEDAIRTLGKAILDRDYSLRVEFPENRLCPMVPNRATYIRYIHDLLSST---SGQ 71
Query: 112 RNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171
++ ++ G DIGTGA+CIYPLLG + + FVG+++ + E A+ N+ N
Sbjct: 72 KDKKRIIGLDIGTGASCIYPLLGCRMYSYDFVGTEIDKFSFETAKSNILQN--------- 122
Query: 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231
N ES Q + +S QD D G
Sbjct: 123 ----NMES----QIKIVLRSKQDCLLPDTEGM---------------------------- 146
Query: 232 LVGVVRDGEQFDFCICNPPFFESMEEAGLN-----PKTSCGGTPEEMVCSGGERAFITRI 286
E+F F +CNPPF+E EE +N P C G EMV GGE F +I
Sbjct: 147 --------EEFTFVMCNPPFYEH-EEDFINFKQNPPSGVCTGVYHEMVTEGGEVGFANKI 197
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF-- 344
+ +S ++ +WYT M G+KS++ ++ KLR+ ++ E G+T RW + WSF
Sbjct: 198 LTESKK-RKGIQWYTCMFGKKSSVPAVVDKLREQNISNYGIYELALGKTKRWIICWSFQA 256
Query: 345 VPPARKIISP 354
+ P ++I P
Sbjct: 257 MRPHNELIRP 266
>gi|343086622|ref|YP_004775917.1| ribosomal RNA large subunit methyltransferase F [Cyclobacterium
marinum DSM 745]
gi|342355156|gb|AEL27686.1| Ribosomal RNA large subunit methyltransferase F [Cyclobacterium
marinum DSM 745]
Length = 316
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 75/353 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+NK + D L P+ + + S+ G I++++ A + L + +L H
Sbjct: 7 DKLRLHPRNK-NRKRYDIHALTKEVPALKNHLNTSKTGAITINFSNPTAVKLLNKAILFH 65
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL---SSNIIPTTSRNGDKVKGFDIGTGAN 127
+ LN+W PDG LCP +P R++Y+H++ DLL ++ IP G K+ DIG GA+
Sbjct: 66 HYNLNYWEFPDGNLCPPIPGRADYLHYMADLLGNSNNGEIPK----GKKINCLDIGVGAS 121
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
CIYP++G + W F G+D+ ++ ++K + +N ++ I ++
Sbjct: 122 CIYPIIGNTSYKWQFTGTDIDPKSIASSQKIIDNNSILTNKITLQ--------------- 166
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
Q +SN + G++R ++FD IC
Sbjct: 167 ----FQKKSNA--------------------------------IFRGIIRPEDKFDLTIC 190
Query: 248 NPPFFESMEEAG---------------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
NPPF S EA NP+ + GT E+V GGE FI +II++S
Sbjct: 191 NPPFHSSAAEAHNGTIRKVKNLNGKRVKNPQLNFSGTSRELVFEGGELKFIQQIIKESQN 250
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++S+V ++SNL + L KVG + KT G +AW+F+
Sbjct: 251 FPDKVFWFSSLVSKQSNLSSIYKSLAKVGAKMHKTIPMGTGNKSTRIVAWTFL 303
>gi|327304100|ref|XP_003236742.1| hypothetical protein TERG_03786 [Trichophyton rubrum CBS 118892]
gi|326462084|gb|EGD87537.1| hypothetical protein TERG_03786 [Trichophyton rubrum CBS 118892]
Length = 431
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 172/342 (50%), Gaps = 62/342 (18%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF LA P+F+ F+ + R+D+++ +A R+LT LL D GL+ +PD +LCP
Sbjct: 13 DFTALALQDPAFKEFL----SAKGRLDFSNPDAVRQLTVSLLRRDFGLDVELPDDRLCPP 68
Query: 88 VPNRSNYIHWIEDLLS-SNIIPTTSRNGDK-VKGFDIGTGANCIYPLLGA-SLLGWSFVG 144
VPNR NYI W++DL+ + N D+ V G DIGTG++CIYPLLGA W+FV
Sbjct: 69 VPNRLNYILWLQDLIDCTGDDFYKGFNADRDVVGLDIGTGSSCIYPLLGAVHRKRWTFVA 128
Query: 145 SDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP--SIQESLTGKSVQDESNMDMSG 202
+D+ + L++A +NV+ N S + + V + P IQ + ++ + +
Sbjct: 129 TDIDEKNLQYARQNVQRNNLQSRIQVVDSVPDGPLIPLDRIQLKMLDFTMCNPPFYESHE 188
Query: 203 HMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNP 262
M + AE + ++ GA++
Sbjct: 189 EMKQLAEEKQNEPLSVCTGAET-------------------------------------- 210
Query: 263 KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGV 322
EM+ GGE AF+ +II++S+ L++ RWYTSM+G++S+L LI +L+ +
Sbjct: 211 ---------EMITPGGEVAFVKKIIQESLDLREAVRWYTSMLGKRSSLLSLIDELQSLDN 261
Query: 323 TIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVAEKKNLS 363
TEF+QG +T RW +AWS+ K I P + +++S
Sbjct: 262 KNWAVTEFIQGDKTKRWAIAWSW-----KDIRPTMGVSRSVS 298
>gi|12654743|gb|AAH01213.1| METT10D protein [Homo sapiens]
Length = 224
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 134/250 (53%), Gaps = 56/250 (22%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++H +N+Y + PPDFA LAS YP F+ V + +GR +++ D A R LT LL D G
Sbjct: 6 SMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
L+ IP +L PTVP R NYIHW+EDL+ S +G DIGTGA+CIYPLLG
Sbjct: 66 LSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ----DSDKSTLRRGIDIGTGASCIYPLLG 121
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV Q++L ++++
Sbjct: 122 ATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP--------QKTLLMDALKE 172
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
ES + +DFC+CNPPFF +
Sbjct: 173 ESEI------------------------------------------IYDFCMCNPPFFAN 190
Query: 255 MEEA-GLNPK 263
EA G+N +
Sbjct: 191 QLEAKGVNSR 200
>gi|28898098|ref|NP_797703.1| SAM-dependent methyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|153836524|ref|ZP_01989191.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260366398|ref|ZP_05778837.1| putative methyltransferase YbiN [Vibrio parahaemolyticus K5030]
gi|260878446|ref|ZP_05890801.1| putative methyltransferase YbiN [Vibrio parahaemolyticus AN-5034]
gi|260897025|ref|ZP_05905521.1| putative methyltransferase YbiN [Vibrio parahaemolyticus Peru-466]
gi|81727904|sp|Q87Q26.1|RLMF_VIBPA RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|28806312|dbj|BAC59587.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149750122|gb|EDM60867.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308087772|gb|EFO37467.1| putative methyltransferase YbiN [Vibrio parahaemolyticus Peru-466]
gi|308090990|gb|EFO40685.1| putative methyltransferase YbiN [Vibrio parahaemolyticus AN-5034]
gi|308113054|gb|EFO50594.1| putative methyltransferase YbiN [Vibrio parahaemolyticus K5030]
Length = 375
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 152/347 (43%), Gaps = 82/347 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P+ FV + G I+++D NA + L + LL + +++W IP+ LCP
Sbjct: 70 DFKKLIASEPALASFVIKNPKGEDSINFSDPNAVKMLNKALLAAYYNIDFWDIPEHYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LL + V+ D+G GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYIHRVAELLDGEV--KGKYRHQNVRALDVGVGANCIYPIVGVTQYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +++ A V+ N ++ IE+ VQ S +
Sbjct: 188 VDPKSIDSAANIVERNVALNGKIEL--------------------VQQMSESHI------ 221
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
Y G V++ ++FD CNPPF S E+A +
Sbjct: 222 -------------------YRG------VIKPNDRFDVTTCNPPFHRSAEDAAMGSQRKL 256
Query: 261 ----------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
P + GG E+ C GGE AFI R+ +S A
Sbjct: 257 DNLKANQRKKGVKQQNSPVKQGKPTLNFGGQNAELWCEGGEAAFIRRMANESQAFSSQVL 316
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWSF+
Sbjct: 317 WFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKISRFMAWSFM 363
>gi|334703728|ref|ZP_08519594.1| 23S rRNA mA1618 methyltransferase [Aeromonas caviae Ae398]
Length = 307
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 153/339 (45%), Gaps = 55/339 (16%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + P DF L P+ PFVF + G +D+ D A + L R LL +G+
Sbjct: 1 MHPRNRH-QAPYDFDALCLRTPALSPFVFVNEHGTRTLDFADPAAVKALNRALLALHYGI 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
W +P G LCP +P R +Y+H + DLL S+ +PT G +V+ D+G GANCIYPL
Sbjct: 60 EHWDLPPGYLCPPIPGRVDYLHRVADLLAESAGCVPT----GKQVRVLDVGVGANCIYPL 115
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST------PSIQES 186
LGA GW FVGSD+ V+++ A SN + I R N + P +
Sbjct: 116 LGAREYGWRFVGSDIDPVSVKAATLLATSN-GLGNQITCRHQGNPKHVFRGILGPKEHFA 174
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
LT N + E ++ + NL G + G PVL
Sbjct: 175 LT------LCNPPFHASLAEASKGTERKLRNL--GKGQAVAGAPVL-------------- 212
Query: 247 CNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR 306
+ GG E+ C GGE AF+ +IE S W++S+V +
Sbjct: 213 ------------------NFGGQKAELWCEGGEAAFLAAMIEQSKEFASQCLWFSSLVSK 254
Query: 307 KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
K NL L +VG V+ + QG LAWSF+
Sbjct: 255 KENLPAARKALARVGAREVRVLDMAQGNKVSRILAWSFL 293
>gi|348028052|ref|YP_004870738.1| methyltransferase [Glaciecola nitratireducens FR1064]
gi|347945395|gb|AEP28745.1| methyltransferase [Glaciecola nitratireducens FR1064]
Length = 322
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 166/366 (45%), Gaps = 85/366 (23%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
++ +P +HP+N ++ DFA LA Y + + + G+ ID++ A + L
Sbjct: 13 KQSNAKPEMHPRNPHNLGY-DFAALADNYAPLKDHLAPNPLGKLTIDFSQPTAVKALNAG 71
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIG 123
LL H + + W IP+G LCP VP R++YIH+I DLL+ + IP G +++G DIG
Sbjct: 72 LLKHYYQVQHWDIPEGFLCPAVPGRADYIHYIADLLALDNNGNIPE----GKQIRGLDIG 127
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYP++ + GWS +GS++ + A +NP++ +L+++R +++
Sbjct: 128 TGANLIYPIVASQSYGWSMLGSEINRASYSSANLIADANPNLRQLVKVRHQKKAKA---- 183
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+ G++++ E FD
Sbjct: 184 -----------------------------------------------IFSGIIKEDEAFD 196
Query: 244 FCICNPPFFESMEE--AGLNPKT-----------------------SCGGTPEEMVCSGG 278
F +CNPPF S + AG K + GG E+ C GG
Sbjct: 197 FSLCNPPFHVSADAALAGSQKKNKNLARHSHKRRGKDSTAKNQSSLNFGGQHNELWCEGG 256
Query: 279 ERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRW 338
E F+ +I++SV K+ W+T+++ +K N+ L+ +K+G + KT QG
Sbjct: 257 EFEFVRSMIKESVEFKKQVTWFTTLLSKKENVAPLLLLAKKLGASECKTINMAQGAKASR 316
Query: 339 GLAWSF 344
+AW F
Sbjct: 317 FIAWRF 322
>gi|258624557|ref|ZP_05719497.1| Ribosomal RNA large subunit methyltransferase F [Vibrio mimicus
VM603]
gi|258583172|gb|EEW07981.1| Ribosomal RNA large subunit methyltransferase F [Vibrio mimicus
VM603]
Length = 326
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 160/356 (44%), Gaps = 82/356 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 13 LHPRNRH-RGQYDFPALIKVVPELQSHVIKNPKGQSTINFADPIAVKLLNKALLALHYGV 71
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++YIH DLL + P + + +V DIG GANCIYP++G
Sbjct: 72 TYWDIPQGFLCPPIPGRADYIHRAADLLIKDC-PDLAHS--QVTALDIGVGANCIYPIVG 128
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GWS+VGSD+ V+++ A V SNP + IE R ++S S
Sbjct: 129 ATEYGWSWVGSDIDPVSIKQASLIVNSNPKLQGKIECRLQNDSHS--------------- 173
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GV+ +GE++ CNPPF S
Sbjct: 174 ------------------------------------IFKGVIGEGERYTLTTCNPPFHAS 197
Query: 255 MEEAGLNP-------------------KTSC-------GGTPEEMVCSGGERAFITRIIE 288
+ EA +TS GG E+ C GGE AFI ++
Sbjct: 198 LAEAQQGTLRKQNNLQANQRKKGRTTVRTSAQTAALNFGGQKAELWCPGGEAAFIGKMAV 257
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 258 ESQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVIEMAQGQKISRFIAWSF 313
>gi|254429363|ref|ZP_05043070.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196195532|gb|EDX90491.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 312
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 162/369 (43%), Gaps = 85/369 (23%)
Query: 1 MGSKKRRRRREERPT---IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTD 57
M +++R ++ + +P +HP+N +++ DF L + YP+ V + G ID+++
Sbjct: 1 MSTRQRSKKSQSKPVRKGLHPRNLHNQGY-DFPALVTSYPALASHVKPNPYGDLSIDFSN 59
Query: 58 FNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDK 116
A + L LL + + W IPDG LCP +P R++YIH+I DL+ N D
Sbjct: 60 PLAVKTLNAALLNRHYNIAGWDIPDGALCPPIPGRADYIHYIADLVGP-------ENPD- 111
Query: 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176
+K DIGTGAN IYPLL + GW VGSD+ +L + SNP + + +R
Sbjct: 112 IKLLDIGTGANGIYPLLACRIYGWQCVGSDINAQSLANVAAIIASNPELKDRFTLR---- 167
Query: 177 SESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236
Q++ N H+ E G++
Sbjct: 168 ---------------TQNDKN-----HIFE---------------------------GII 180
Query: 237 RDGEQFDFCICNPPFFESMEEA---------------------GLNPKTSCGGTPEEMVC 275
+ E FD +CNPPF S +EA P + GG E+ C
Sbjct: 181 QSDECFDVSVCNPPFHASQDEALKSSQMKASNLARNRGEEKATTKAPNLNFGGQGAELWC 240
Query: 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT 335
GGE F+ +++ +S RW+TS+V + N++ L + KVG ++ E QG
Sbjct: 241 KGGELLFLKKMVRESQVYSSQCRWFTSLVSKADNVRPLKKLMLKVGAVDIREIEMKQGNK 300
Query: 336 CRWGLAWSF 344
LAW+F
Sbjct: 301 VARVLAWTF 309
>gi|449677249|ref|XP_002163041.2| PREDICTED: methyltransferase-like protein 16-like [Hydra
magnipapillata]
Length = 296
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 163/341 (47%), Gaps = 57/341 (16%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N + ++PPDF L YP F P+V G+ +++ D + R L+ VLL +
Sbjct: 1 MHNRNVFKDSPPDFKRLMLEYPEFAPYVHIGSSGKAYVNFKDPASLRSLSLVLLKKYFNI 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
IP +L PT+P R NYIHWIEDL T G DIG GA+CIYPLLG
Sbjct: 61 IIDIPLDRLIPTIPLRLNYIHWIEDL--------TGCLNKSASGIDIGCGASCIYPLLGN 112
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ W F+ +++ + +AE NV N E I++ S ++S+ + E
Sbjct: 113 KINNWKFIATEVNVESHAYAENNVIKN-LAQEYIKV-------ILTSPEKSIFDCVMASE 164
Query: 196 SNMDMSGHMDEEAEPSSSSSF--NLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+ D + P S N+ + ++ + PP+ D E F
Sbjct: 165 FDYDFTI-----CNPPFFSEINDNIISKNRTGHRPPPISQSTASDSESF----------- 208
Query: 254 SMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
GGE F+ R+I++S+ LK+ RW+T+M+G+KS+LK L
Sbjct: 209 ---------------------TEGGEVEFVKRMIDESLLLKKRIRWFTTMLGKKSSLKEL 247
Query: 314 ISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP--PARKII 352
+ ++ ++ TTEFVQG+T RWGLAWSF P R II
Sbjct: 248 VKYIKHNQISKFTTTEFVQGRTMRWGLAWSFTDYFPDRIII 288
>gi|258619928|ref|ZP_05714969.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|424809879|ref|ZP_18235252.1| hypothetical protein SX4_3844 [Vibrio mimicus SX-4]
gi|258587798|gb|EEW12506.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|342322976|gb|EGU18763.1| hypothetical protein SX4_3844 [Vibrio mimicus SX-4]
Length = 364
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 161/356 (45%), Gaps = 82/356 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 51 LHPRNRH-RGQYDFPALIKVVPELQSHVIKNPKGQSTINFADPIAVKLLNKALLALHYGV 109
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W +P G LCP +P R++YIH DLL + P + + +V DIG GANCIYP++G
Sbjct: 110 TYWDVPHGFLCPPIPGRADYIHRAADLLIKDC-PDLAHS--QVTALDIGVGANCIYPIVG 166
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GWS+VGSD+ V+++ A V SNP + IE R ++S++
Sbjct: 167 ATEYGWSWVGSDIDPVSIKQASLIVNSNPKLQGKIECRLQNDSQN--------------- 211
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GV+ +GE++ CNPPF S
Sbjct: 212 ------------------------------------IFKGVIGEGERYTLTTCNPPFHAS 235
Query: 255 MEEAGLNP-------------------KTSC-------GGTPEEMVCSGGERAFITRIIE 288
+ EA +TS GG E+ C GGE AFI ++
Sbjct: 236 LAEAQQGTLRKQNNLQANQRKKGRTTVRTSAQTAALNFGGQKAELWCPGGEAAFIGKMAV 295
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 296 ESQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVIEMAQGQKISRFIAWSF 351
>gi|262402307|ref|ZP_06078868.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
sp. RC586]
gi|262351089|gb|EEZ00222.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
sp. RC586]
Length = 361
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 161/355 (45%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPKLNPSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++R GE++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIRAGERYMLTTCNPPFHAS 233
Query: 255 MEEA-------------------------GLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A +P+ + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTSSHPRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+++++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 SQQFAEQVLWFSTLISKGDNVRDMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSF 348
>gi|336123983|ref|YP_004566031.1| methyltransferase [Vibrio anguillarum 775]
gi|335341706|gb|AEH32989.1| Methyltransferase [Vibrio anguillarum 775]
Length = 344
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 162/359 (45%), Gaps = 85/359 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD-HG 74
+HP+N++ + DF L + P+ +PFV ++ G I+++D + L + LL H H
Sbjct: 27 LHPRNQH-QGQYDFPALINTLPALKPFVIRNQSGEASINFSDAMVVKMLNKALLAHHYHV 85
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++YIH + DLL + ++ +KV+ DIG GANCIYP++G
Sbjct: 86 THWDIPAGYLCPPIPGRADYIHRVADLL---LDECSAIKHEKVQALDIGVGANCIYPIVG 142
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW +VGSD+ +++ A V SN ++ IE R +++
Sbjct: 143 VAEYGWHYVGSDIDPISIRSANLVVNSNASLNGRIECRLQSDAKH--------------- 187
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ ++++ E++D CNPPF S
Sbjct: 188 ------------------------------------IFKQIIQENERYDLTTCNPPFHAS 211
Query: 255 MEEA-----------------------GLNPKTS------CGGTPEEMVCSGGERAFITR 285
+A G + S GG E+ C GGE AFI
Sbjct: 212 QLQAQQGSERKLKNLQRNRVKKGQEIVGQDANRSKAVTLNFGGQKAELWCPGGEAAFIKN 271
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ +S Q W+T+++ +K N++++ +L KVG +VK E QGQ +AWSF
Sbjct: 272 MAFESQHYAQQVLWFTTLISKKENVRWMQKQLDKVGAAVVKVVEMQQGQKVSRFIAWSF 330
>gi|329295879|ref|ZP_08253215.1| 23S rRNA mA1618 methyltransferase [Plautia stali symbiont]
Length = 346
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 158/347 (45%), Gaps = 68/347 (19%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
HP+N++ + DFA L + +P V + G +D+ D +A L + LL + L
Sbjct: 10 FHPRNRH-QGRYDFAALTAAHPPLADKVRPNGYGELSVDFADPHAVLLLNQALLKLFYNL 68
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
NW +P+G L P VP R++YIH + DLL+S+ R+ D + DIG GANCIYPL+G
Sbjct: 69 NWQLPEGYLTPPVPGRADYIHALADLLASDNGGVLPRDLDVM---DIGCGANCIYPLIGH 125
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
+ GW F G+D++ A+ A + V SNP + I +R+ QES
Sbjct: 126 AEYGWRFTGTDISADAVNAASQIVASNPGLQRAIRLRR--------QKQES--------- 168
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES- 254
+ GVV E++ +CNP F S
Sbjct: 169 ----------------------------------AIFAGVVHKNERYHAVLCNPLFHGSA 194
Query: 255 ----------MEEAGLNPKT--SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
+ GL+ + + GG E+ C G ERAF R+I++SVAL W+TS
Sbjct: 195 ADAAAGSQRKVRNLGLSKQAPLNFGGQHNELWCDGSERAFTGRMIDESVALGDRIVWFTS 254
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPAR 349
+V RK +L L +L+ V+ QGQ +AW+F P R
Sbjct: 255 LVSRKEHLPELRDRLKAQDAYQVRIVGMAQGQKQSRFIAWTFYRPPR 301
>gi|262171374|ref|ZP_06039052.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
mimicus MB-451]
gi|261892450|gb|EEY38436.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
mimicus MB-451]
Length = 364
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 160/356 (44%), Gaps = 82/356 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 51 LHPRNRH-RGQYDFPALIKVVPELQSHVIKNPKGQSTINFADPIAVKLLNKALLALHYGV 109
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++YIH DLL + P + + +V DIG GANCIYP++G
Sbjct: 110 TYWDIPQGFLCPPIPGRADYIHRAADLLIKDC-PDLAHS--QVTALDIGVGANCIYPIVG 166
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
++ GWS+VGSD+ V+++ A V SNP + IE R ++S S
Sbjct: 167 STEYGWSWVGSDIDPVSIKQASLIVNSNPKLQGKIECRLQNDSHS--------------- 211
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GV+ +GE++ CNPPF S
Sbjct: 212 ------------------------------------IFKGVIGEGERYTLTTCNPPFHAS 235
Query: 255 MEEAGLNP-------------------KTSC-------GGTPEEMVCSGGERAFITRIIE 288
+ EA +TS GG E+ C GGE AFI ++
Sbjct: 236 LAEAQQGTLRKQNNLQANQRKKGRTTVRTSAQTAALNFGGQKAELWCPGGEAAFIGKMAV 295
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 296 ESQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQPIQVIEMAQGQKISRFIAWSF 351
>gi|409122113|ref|ZP_11221508.1| 23S rRNA mA1618 methyltransferase [Gillisia sp. CBA3202]
Length = 284
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 155/343 (45%), Gaps = 73/343 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N ++E +F L ++P + + + ID+ + + L + LL + +
Sbjct: 1 MHPNNIHNE-AYNFEELVKVHPELGDHIIDNVNSEETIDFGNNQSVLHLNKALLKRHYKV 59
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP L P +P R++YIH + DLL+ + +VKG DIG GANCIYP+LG
Sbjct: 60 TDWNIPPQYLIPPIPGRADYIHHLADLLAEEKLTP------EVKGLDIGVGANCIYPILG 113
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
S+ W VG+D+ + A+ A+ N+ + +S+ IEIR D D
Sbjct: 114 HSIYHWKMVGADIDENAVVAAQNNINTTKKLSQNIEIRYQD------------------D 155
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
SNM G++++GE F+F +CNPPF S
Sbjct: 156 HSNM---------------------------------FKGIIKEGEYFNFSMCNPPFHSS 182
Query: 255 MEEAG-------------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
EEA + + GG E+ C+GGE F+ R+I++SV K W+T
Sbjct: 183 KEEAAKTSRRKTKNLGREIGSPLNFGGESNELWCNGGEALFLKRMIKESVNFKSQVGWFT 242
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S++ + +L + +L K+ T K QG +AW F
Sbjct: 243 SLISKNESLSKIYKQLDKLKAT-YKVIPMSQGNKKSRFIAWKF 284
>gi|381395230|ref|ZP_09920935.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola punicea DSM
14233 = ACAM 611]
gi|379329131|dbj|GAB56068.1| 23S rRNA (adenine1618-N6)-methyltransferase [Glaciecola punicea DSM
14233 = ACAM 611]
Length = 311
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 159/363 (43%), Gaps = 86/363 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL-LHDHG 74
+H +N + +N DF L +P P V + R ID+ + +A + L LL + H
Sbjct: 1 MHSRNLH-KNGYDFEALTRTHPLLAPHVIRNPSARKTIDFGNAHAVKALNAALLKRYYHI 59
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSN-IIPTTSRN-GDKVKGFDIGTGANCIYPL 132
+W IP+G LCP +P R++YIH I DLLS++ P ++R ++ G DIGTGAN IYP+
Sbjct: 60 EHWDIPEGYLCPPIPGRADYIHAIADLLSASPATPASTRQFPARLVGLDIGTGANLIYPI 119
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
+G+ GW FV SD+ A+ A SN S+ KSV
Sbjct: 120 IGSQSYGWHFVASDVDKGAIASANLIRSSN-----------------------SVLRKSV 156
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ ++ D GV++ EQF F +CNPPF
Sbjct: 157 RILQQHKLNSIFD----------------------------GVIKPHEQFAFSMCNPPFH 188
Query: 253 ESMEEA------------------------GLNPKT-------SCGGTPEEMVCSGGERA 281
S +EA +PK + G E+ C+GGE
Sbjct: 189 NSQKEALAGSMQKNQNIKRNQDKRHSSIQGHSSPKNDRSGSHLNFAGQKNELWCAGGEVG 248
Query: 282 FITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341
FI+R+I +SV K+ W+TS+V ++ +L L KL +VG KT QG +A
Sbjct: 249 FISRMIAESVHYKEQVTWFTSLVAKQKSLAPLYKKLTQVGALEYKTVGMAQGSKISRFIA 308
Query: 342 WSF 344
W F
Sbjct: 309 WRF 311
>gi|359396850|ref|ZP_09189901.1| Ribosomal RNA large subunit methyltransferase F [Halomonas
boliviensis LC1]
gi|357969528|gb|EHJ91976.1| Ribosomal RNA large subunit methyltransferase F [Halomonas
boliviensis LC1]
Length = 312
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 80/363 (22%)
Query: 5 KRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATREL 64
++ R + R +HP N ++ DF L +P+ P V + G ID+ D A + L
Sbjct: 8 EKSRAKPVRKGLHPNNLHNRGY-DFPALVKSHPALAPHVKPNAHGERSIDFADPLAVKTL 66
Query: 65 TRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIG 123
LL + + W IP G LCP +P R++YIH++ DL+ +K DIG
Sbjct: 67 NAALLNRYYNIVGWDIPVGALCPPIPGRADYIHYMADLIG------LGGEQASIKLLDIG 120
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN IYPLL + GW VGSD+ +LE + + +N P++
Sbjct: 121 TGANGIYPLLACQIYGWQCVGSDINAQSLENVARIIANN------------------PTL 162
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
++ T ++ D+++ + G+++ GE FD
Sbjct: 163 EDRFTLRTQHDKNH---------------------------------IFEGIIQPGEFFD 189
Query: 244 FCICNPPFFESMEEA------GLN---------------PKTSCGGTPEEMVCSGGERAF 282
+CNPPF S++EA LN P + GG E+ C GGE+ F
Sbjct: 190 VSVCNPPFHASLDEALKGSQRKLNNLARNRGEQKATTQSPALNFGGLGAELWCKGGEQLF 249
Query: 283 ITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAW 342
+ ++I +S A RW++S+V + N+K + K+G ++ E QG LAW
Sbjct: 250 LKKLIRESQAYSTQCRWFSSLVSKADNVKPAKKLISKLGAVDIRELEMKQGNKVTRVLAW 309
Query: 343 SFV 345
+F+
Sbjct: 310 TFI 312
>gi|325287730|ref|YP_004263520.1| rRNA (adenine-N(6)-)-methyltransferase [Cellulophaga lytica DSM
7489]
gi|324323184|gb|ADY30649.1| rRNA (adenine-N(6)-)-methyltransferase [Cellulophaga lytica DSM
7489]
Length = 287
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 160/350 (45%), Gaps = 86/350 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL-LHDHG 74
+HPKN ++ P F L +P ++ ++ ID+ + A L + LL LH +
Sbjct: 1 MHPKNLHNT-PYQFNKLIEKHPELSLYITDNKFNNKTIDFFNSEAVLHLNKALLKLHYNI 59
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP LC +P R++YIH I D+L+ I D +KG DIG GANCIYP+LG
Sbjct: 60 NHWGIPKNYLCAPIPGRADYIHHIADILAKENIK------DTIKGLDIGVGANCIYPILG 113
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
++ W VG+D+ + A+ A++ V +N ++ + IEIRK +++ +
Sbjct: 114 KTIYNWQMVGADINETAVTNAKQIVAANTNLIDSIEIRKQNSNAN--------------- 158
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G+++ E+FDF +CNPPF S
Sbjct: 159 ------------------------------------IFTGIIKPNEKFDFTMCNPPFHSS 182
Query: 255 MEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+EA GL + + GG E+ C+GGE F+ R+I++SV K
Sbjct: 183 EKEATKGTQRKLKNLGKQANGL--ELNFGGMANELWCNGGEALFLKRLIKESVLFKDQVT 240
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFV----QGQTCRWGLAWSF 344
+TS+V + NL L +L K +K + F+ QG LAW F
Sbjct: 241 VFTSLVSKSDNLPKLQKQLTK-----LKASYFIVPMEQGNKKSRILAWKF 285
>gi|261211736|ref|ZP_05926023.1| predicted SAM-dependent methyltransferase [Vibrio sp. RC341]
gi|260839086|gb|EEX65718.1| predicted SAM-dependent methyltransferase [Vibrio sp. RC341]
Length = 362
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 158/356 (44%), Gaps = 82/356 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L ++ P + V + G+P ID+ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALINVVPELQSHVIKNPKGQPTIDFADPCAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPQGFLCPPIPGRADYIHRVADLLVKD---NPKLNSSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW++VGSD+ V+++ A V++N + IE R +NS+
Sbjct: 165 VTEYGWTWVGSDVDPVSVKQASLIVENNSTLQGHIECRLQNNSQH--------------- 209
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G+++ GE++ CNPPF S
Sbjct: 210 ------------------------------------IFQGIIQAGERYTLTTCNPPFHAS 233
Query: 255 MEEAG--------------------------LNPKTSCGGTPEEMVCSGGERAFITRIIE 288
+ EA + + GG E+ C GGE AFI ++
Sbjct: 234 LAEAQQGTLRKQHNLQANQRKKGRTITRNSVQSTALNFGGQKAELWCPGGEAAFIGKMAV 293
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S + W+++++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 ESQQFAEQVLWFSTLISKGDNVRGMKKQLEKLGAQSIHVVEMAQGQKISRFIAWSF 349
>gi|254225311|ref|ZP_04918923.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125622152|gb|EAZ50474.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 363
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 158/356 (44%), Gaps = 82/356 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L ++ P + V + G+P ID+ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALINVVPELQSHVIKNPKGQPTIDFADPCAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPQGFLCPPIPGRADYIHRVADLLVKD---NPKLNSSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GW++VGSD+ V+++ A V++N + IE R +NS+
Sbjct: 165 VTEYGWTWVGSDVDPVSVKQASLIVENNSTLQGHIECRLQNNSQH--------------- 209
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G+++ GE++ CNPPF S
Sbjct: 210 ------------------------------------IFQGIIQAGERYTLTTCNPPFHAS 233
Query: 255 MEEAG--------------------------LNPKTSCGGTPEEMVCSGGERAFITRIIE 288
+ EA + + GG E+ C GGE AFI ++
Sbjct: 234 LAEAQQGTLRKQHNLQANQRKKGRTITRNSVQSTALNFGGQKAELWCPGGEAAFIGKMAV 293
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S + W+++++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 ESQQFAEQVLWFSTLISKGDNVRGMKKQLEKLGAQSIHVVEMAQGQKISRFIAWSF 349
>gi|317029830|ref|XP_001391311.2| hypothetical protein ANI_1_1582064 [Aspergillus niger CBS 513.88]
Length = 430
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 156/329 (47%), Gaps = 68/329 (20%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF LA P F ++ ++D++D +A R+LT+ LL D L IP+ +LCP
Sbjct: 13 DFTALALQSPEFAKYL----KSNGQLDFSDPDAVRQLTKSLLQRDFELKVEIPENRLCPP 68
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGD---KVKGFDIGTGANCIYPLLGASLL-GWSFV 143
VPNR NYI W++DLL + N D +V G DIGTG IYPLLG S+ W FV
Sbjct: 69 VPNRLNYILWLQDLLDTTG-DEYRDNYDPDREVIGLDIGTGCCSIYPLLGCSMRPHWRFV 127
Query: 144 GSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGH 203
+D+ + + + N + IEI + D + + L N+D
Sbjct: 128 ATDIDKDNIRTSRDTISKN-KLDSRIEIIQTDPKDELIPLDTKL---------NVD---- 173
Query: 204 MDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLN-- 261
+ DF +CNPPF+ S +E +
Sbjct: 174 -------------------------------------RLDFTMCNPPFYASRDELIASAE 196
Query: 262 -----PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISK 316
P ++C G EMV +GGE AFITR+IE+S+ L++ WYT+M+G+ S++ LI
Sbjct: 197 AKERPPFSACTGAEVEMVTTGGEIAFITRMIEESLRLRERVIWYTTMLGKLSSVSVLIET 256
Query: 317 LRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
L + TEFVQG +T RW ++WS+
Sbjct: 257 LLEHKNNNYAVTEFVQGNKTRRWAISWSW 285
>gi|330504715|ref|YP_004381584.1| putative SAM-dependent methyltransferase [Pseudomonas mendocina
NK-01]
gi|328919001|gb|AEB59832.1| putative SAM-dependent methyltransferase [Pseudomonas mendocina
NK-01]
Length = 336
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 158/347 (45%), Gaps = 71/347 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ + DF L P FV + G+P ID+ + +A + R LL +G+
Sbjct: 28 LHPRNRH-QGHYDFPALIKASPELGQFVITNPYGKPSIDFANPSAVKVFNRALLAQYYGI 86
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IPDG LCP +P R++Y+H + DLL+++ R G ++ DIG GANCIYPL+G
Sbjct: 87 RHWDIPDGYLCPPIPGRADYLHNLADLLATDNDGQIPR-GAGIRALDIGVGANCIYPLIG 145
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW F+G+D+ AL A + +N ++ I++R+ N+E
Sbjct: 146 HCEYGWRFIGADIAAAALASARVIITANAQLAGGIDLRQQANAEH--------------- 190
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ +G+++ + D +CNPPF S
Sbjct: 191 ------------------------------------IFLGLLQPDDCIDLTLCNPPFHAS 214
Query: 255 MEEA------------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
+EA L+PK GG E+ C GGE AF+ R+ +S +
Sbjct: 215 ADEATRGSTRKWRNLGKLDPKRKLPVLNFGGQAAELWCPGGEAAFLKRMASESAQVAGQV 274
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W++S+V + SN++ L L + G V+ QGQ +AW+F
Sbjct: 275 LWFSSLVSKGSNVELLQGWLTRAGAAEVRILGMSQGQKQSRLVAWTF 321
>gi|294143028|ref|YP_003559006.1| hypothetical protein SVI_4257 [Shewanella violacea DSS12]
gi|293329497|dbj|BAJ04228.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 406
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 163/407 (40%), Gaps = 114/407 (28%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
K R + ++ +H +N + + DF L + P +PFV + G ID+ D A +
Sbjct: 50 KPRSVKAADKKGLHERNLHRDGY-DFDKLIAASPELKPFVRPNPYGNLSIDFADPLAVKA 108
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---------------- 106
L LL+ + + W IP G LCP +P R +Y+H++ DLL+ N+
Sbjct: 109 LNLALLMAHYRIESWDIPQGFLCPPIPGRVDYLHYVADLLAGNLPIQGDEVQSGQNDPAL 168
Query: 107 -------------IPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153
IPT G K+K DIGTGAN IYP+LG GW F SD+ +++
Sbjct: 169 TETRAKTATKTNRIPT----GLKIKALDIGTGANGIYPILGIQSYGWQFTASDVDSLSIA 224
Query: 154 WAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSS 213
E +K+N + + R
Sbjct: 225 NVELIIKANLSLQGKFKTR----------------------------------------- 243
Query: 214 SSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAG-------------- 259
L Q +H G++ ++FD +CNPPF S+ EA
Sbjct: 244 ----LQIDPQKIFH------GIINADDRFDVTLCNPPFHSSLAEASEGSQRKLKNLAANR 293
Query: 260 --------------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
N + GG E+ C GGE+ F+ +I +S K W+TS+V
Sbjct: 294 AAKGHKSEPAKAKDANAGLNFGGQKAELWCEGGEKQFLLNMIRESSDFKTQCLWFTSLVS 353
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII 352
++ NLK + L K G VKT + QG LAWSF+ P ++ +
Sbjct: 354 KQENLKPSYAALEKAGAVTVKTIDMAQGNKLTRVLAWSFLTPKQQAL 400
>gi|262165792|ref|ZP_06033529.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
mimicus VM223]
gi|262025508|gb|EEY44176.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
mimicus VM223]
Length = 364
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 157/356 (44%), Gaps = 82/356 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 51 LHPRNRH-RGQYDFPALIKVVPELQSHVIKNPKGQSTINFADPIAVKLLNKALLALHYGV 109
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP G LCP +P R++YIH DL + +V DIG GANCIYP++G
Sbjct: 110 TYWDIPQGFLCPPIPGRADYIHRAADLFIKDCPELVH---SQVNALDIGVGANCIYPIVG 166
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GWS+VGSD+ V+++ A V SNP + IE R ++S++
Sbjct: 167 ATEYGWSWVGSDIDPVSIKQASLIVNSNPKLQGKIECRLQNDSQN--------------- 211
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GV+ +GE++ CNPPF S
Sbjct: 212 ------------------------------------IFKGVIGEGERYTLTTCNPPFHAS 235
Query: 255 MEEAGLNP-------------------KTSC-------GGTPEEMVCSGGERAFITRIIE 288
+ EA +TS GG E+ C GGE AFI ++
Sbjct: 236 LAEAQQGTLRKQNNLQANQRKKGRTTVRTSAQTAALNFGGQKAELWCPGGETAFIGKMAV 295
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 296 ESQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVIEMAQGQKISRFIAWSF 351
>gi|332662865|ref|YP_004445653.1| rRNA (adenine-N(6)-)-methyltransferase [Haliscomenobacter hydrossis
DSM 1100]
gi|332331679|gb|AEE48780.1| rRNA (adenine-N(6)-)-methyltransferase [Haliscomenobacter hydrossis
DSM 1100]
Length = 566
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 154/349 (44%), Gaps = 75/349 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
HP+N++ E DF L P PFV + I +T+ A + L + LL +G+
Sbjct: 257 FHPRNQHQERY-DFKALVESCPELAPFVKMNMHNDESISFTNLEAVKMLNKALLKQYYGV 315
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIYP 131
NW IP P P R++YIH I +LL + IPT G ++K DIG GA+C+YP
Sbjct: 316 ENWDIPATYQVPATPVRADYIHHIAELLGAANDKNIPT----GQQIKCLDIGVGASCVYP 371
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G WSFVGSD+ +A+E A K + +NP + E +E R
Sbjct: 372 IIGRKEYEWSFVGSDIDPIAIESANKIIAANPFLQEGVECR------------------- 412
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
L A + + G ++++GE FD ICNPPF
Sbjct: 413 --------------------------LQANPKDIFQG------IIQEGELFDLTICNPPF 440
Query: 252 --FESMEEAGLNPKTSC-------------GGTPEEMVCSGGERAFITRIIEDSVALKQT 296
FE + E K S G E+ C GGE AFI +I +S ++
Sbjct: 441 HVFEKVGEGKSKRKLSTLKVKKAVQASIKLGIENGELSCEGGEEAFIKEMIRESKQFAKS 500
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W++++V ++S+LK L + T +K QG +AWSF+
Sbjct: 501 CYWFSTLVVKQSHLKSAYKTLEGMAATEIKIIPMGQGNKSSRVIAWSFL 549
>gi|238753374|ref|ZP_04614737.1| Ribosomal RNA large subunit methyltransferase F [Yersinia ruckeri
ATCC 29473]
gi|238708327|gb|EEQ00682.1| Ribosomal RNA large subunit methyltransferase F [Yersinia ruckeri
ATCC 29473]
Length = 354
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 163/369 (44%), Gaps = 78/369 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N + DF L+ P F+ + G +D+ D A + L R LL
Sbjct: 43 KEKSGLHPRNHHRSRY-DFDALSISCPELSAFLAPNAYGDISVDFADPAAVKMLNRALLK 101
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
H +G+ +W IP LCP +P R++Y+H + DLL+S+ +IP G V D+G GA
Sbjct: 102 HFYGIEFWDIPADYLCPPIPGRADYLHHLADLLASDNGGVIP----QGKSVAVLDVGVGA 157
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+++ AL A+ V NP + + ++
Sbjct: 158 NCIYPIIGQREYGWRFTGTEIDPQALSAAKMVVSMNPTLRNTLRLKL------------- 204
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
+ +P++ + GV E++D +
Sbjct: 205 --------------------QKQPAA------------------IFDGVWAINERYDVTL 226
Query: 247 CNPPFFESM----------------EEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S E P + GG E+ C GGE F+TR++ +S
Sbjct: 227 CNPPFHASAEEAAATTRRKLHKLGKNEVAAQPVQNFGGKNAELWCDGGEEGFVTRMVRES 286
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
V W+TS+V +K++L + LR ++T + QGQ +AW+F A++
Sbjct: 287 VERGNNCLWFTSLVSKKTSLPAIYHALRYANAAEIRTIDMAQGQKVSRFVAWTFQTEAQR 346
Query: 351 IISPHVAEK 359
+ VAE+
Sbjct: 347 AV--WVAER 353
>gi|163801017|ref|ZP_02194917.1| hypothetical protein 1103602000593_AND4_02103 [Vibrio sp. AND4]
gi|159175366|gb|EDP60163.1| hypothetical protein AND4_02103 [Vibrio sp. AND4]
Length = 385
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 92/357 (25%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P PFV + G I+++D A + L + LL + +++W IPD LCP
Sbjct: 70 DFKKLIAADPQLGPFVILNPKGEESINFSDPKAVKMLNKALLAAYYDIDFWNIPDSYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL + + + KV+ D+G GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYVHRVAELLDGEVKGKYAHH--KVRALDVGVGANCIYPIVGVTQYGWQYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++E A EI E N+ +SG +
Sbjct: 188 IDPKSIESAR-------------EIA----------------------ERNVSLSGKIKL 212
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ S ++ + +G+++ G+++D CNPPF S EEA
Sbjct: 213 VQQISEAN----------------IYLGIIQPGDRYDITTCNPPFHSSAEEAATGSQRKL 256
Query: 261 --------------------------------NPKTSCGGTPEEMVCSGGERAFITRIIE 288
P+ + GG E+ GGE AFI ++
Sbjct: 257 DNLKANQSKKWPKVPYHQVDAYQSKKHRVKSSKPELNFGGQNAELWYEGGEAAFIRKMAS 316
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++
Sbjct: 317 ESKEFSAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRVVEMSQGQKVSRFIAWSYM 373
>gi|71064589|ref|YP_263316.1| SAM-dependent methyltransferase [Psychrobacter arcticus 273-4]
gi|123649939|sp|Q4FVS6.1|RLMF_PSYA2 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|71037574|gb|AAZ17882.1| 23S rRNA m(6)A-1618 methyltransferase [Psychrobacter arcticus
273-4]
Length = 345
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 158/368 (42%), Gaps = 95/368 (25%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DF L P + G P I+++D A R L + LL H +G+
Sbjct: 29 LHPRNPH-QGRYDFVALTHALPELAKHTITNPKGEPTINFSDSAAVRVLNQALLAHYYGV 87
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSS-------NIIPTTSRNGDKVKGFDIGTGAN 127
+W IP+G LCP +P R++YIH+I DLL+ N PT G ++ DIGTGA+
Sbjct: 88 KFWDIPEGYLCPPIPGRADYIHYIADLLAQTTHVNKDNTPPT----GKEIHALDIGTGAS 143
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYP++G+ GW F SD+ +++ A ++NP + ++++
Sbjct: 144 AIYPIVGSQSYGWRFTASDIDPISVNTAALICETNPKLKSAVKVKL-------------- 189
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+ EP + ++ + FD +C
Sbjct: 190 -------------------QPEPKR------------------IFANIIGRQDYFDVVVC 212
Query: 248 NPPFFESMEEA---------------GLNPKTSC----------------GGTPEEMVCS 276
NPPF S+EEA G N GG +E+
Sbjct: 213 NPPFHASLEEAMEANSRKQHNLQRHRGKNENEQISRSSTKSGNAAQNLNFGGQHKELWSE 272
Query: 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTC 336
GGE AF+T++ ++S + W+T++V + N+K + L+++GV ++ E QGQ
Sbjct: 273 GGEIAFLTKMAKESQDFAEHVGWFTTLVSKSENVKPMQLLLKQLGVAQMRIIEMSQGQKS 332
Query: 337 RWGLAWSF 344
LAW F
Sbjct: 333 TRILAWRF 340
>gi|221133425|ref|ZP_03559730.1| putative SAM-dependent methyltransferase [Glaciecola sp. HTCC2999]
Length = 302
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 149/349 (42%), Gaps = 84/349 (24%)
Query: 25 NPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQ 83
N DF LA++YP + F+ + G+ ID+ A + L LL H +G+ W IP+G
Sbjct: 9 NGYDFVQLAAVYPPLKAFMAPNPVGKLTIDFAQPKAVKALNASLLAHHYGVRQWDIPEGY 68
Query: 84 LCPTVPNRSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGW 140
LCP VP R++Y+H+I DLL+ + IPT G +KG DIGTGAN IYP++ W
Sbjct: 69 LCPAVPGRADYVHFIADLLAEDNAGEIPT----GQSIKGLDIGTGANLIYPIVANRSYDW 124
Query: 141 SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDM 200
VGSD+ + + A +SNP++ + +R + E
Sbjct: 125 QMVGSDIHAPSFKNATLIAQSNPNLKNNVTVRHQTSPEQ--------------------- 163
Query: 201 SGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESME---- 256
+ G++ E F F +CNPPF ES E
Sbjct: 164 ------------------------------IFSGIIHPQETFAFTMCNPPFHESAEAAMS 193
Query: 257 -------------------EAGLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
E+ N + S GG E+ C GGE F+ +++ +SV Q
Sbjct: 194 GSVKKNKNLARHKHKRRGKESTANNRQSLNFGGQHNELWCDGGEWRFVKKMLNESVEFAQ 253
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS++ +K ++ L+ + + + E QG +AW F
Sbjct: 254 QVGWFTSLISKKQHVDSLVKHANTLNIKDCRVVEMTQGAKLSRFIAWRF 302
>gi|317139416|ref|XP_003189162.1| hypothetical protein AOR_1_754174 [Aspergillus oryzae RIB40]
Length = 429
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 164/337 (48%), Gaps = 67/337 (19%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRP--RIDWTDFNATRELTRVLLLHDHGLN 76
+N ++ DFA LA P F ++ +P ++D++D +A R+L++ LL D GLN
Sbjct: 5 RNNIYKDDVDFATLALQSPEFAKYL------KPNNQLDFSDPDAVRQLSKSLLQRDFGLN 58
Query: 77 WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN-------GDKVKGFDIGTGANCI 129
IP+ +LCP VPNR NYI W++ LL TT + KV G DIGTG I
Sbjct: 59 VHIPENRLCPPVPNRLNYILWLQSLLD-----TTGKEYRDDYDPDRKVVGLDIGTGCCSI 113
Query: 130 YPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
YPLLG S+ W+FV +D+ D + +++ V N ++ I + K D S + +
Sbjct: 114 YPLLGCSVRPQWNFVATDIDDENIRTSQEAVSGN-NLDSRIRVVKTDTSGDLIPLDKL-- 170
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
E E + N P Y LV + E+
Sbjct: 171 ------------------EVEGLDFTMCNPPF-----YTSREELVSSAQAKER------- 200
Query: 249 PPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS 308
PPF ++C G EMV GGE AF++R+IE+S+ L+Q WYTSM+G+ S
Sbjct: 201 PPF------------SACTGAEVEMVTQGGEVAFVSRMIEESLRLRQKVLWYTSMLGKLS 248
Query: 309 NLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
++ L+ KL G TEFVQG +T RW +AWS+
Sbjct: 249 SVSILVEKLIGHGNHNYAVTEFVQGSKTRRWAIAWSW 285
>gi|119476126|ref|ZP_01616478.1| hypothetical SAM-dependent methyltransferase [marine gamma
proteobacterium HTCC2143]
gi|119450753|gb|EAW31987.1| hypothetical SAM-dependent methyltransferase [marine gamma
proteobacterium HTCC2143]
Length = 343
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 30/339 (8%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DF L + P V + GR ID+++ ++ + L + LL + +
Sbjct: 14 LHPRNLHKQ-LYDFDSLKKVLPELSAAVSENSQGRLSIDFSNPHSVKLLNKALLRAFYQV 72
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI-------IPTTSRNGDKVKGFDIGTGAN 127
W IP G LCP +P R++Y+H++ D+L+ + + +T G KV DIG GAN
Sbjct: 73 EHWDIPAGYLCPPIPGRADYLHYLADILAESYPLRDRVKVSSTIPVGKKVTVMDIGMGAN 132
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
C+YP++G GWSF+G+D+ A+ A V SN + I+ R N+++ + L
Sbjct: 133 CVYPIIGTRHYGWSFIGTDIDPAAVSSAAMLVVSNSTLRGRIDCRLQANTQNI--FRGVL 190
Query: 188 TGKSVQDESNMDMSGHMDEEA--EPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+ D + + H EA E SS NL A A + P GE+ F
Sbjct: 191 SENERVDATLCNPPFHHSPEAAAEGSSRKINNLRANA--TRKSRPA-------GEKRQFA 241
Query: 246 ICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
++ + + GG E+ C+GGE AFIT+II++S + W+TS+V
Sbjct: 242 --------KSQQQTTTSRLNFGGQGAELWCAGGEVAFITQIIKESAGVADQCLWFTSLVS 293
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+K NL + L+ V +++KT + QGQ +AW+F
Sbjct: 294 KKDNLAAIYRALKSVKPSLIKTIQMQQGQKLTRIVAWTF 332
>gi|417821006|ref|ZP_12467620.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE39]
gi|422910682|ref|ZP_16945316.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE-09]
gi|423954292|ref|ZP_17734717.1| hypothetical protein VCHE40_1805 [Vibrio cholerae HE-40]
gi|423983794|ref|ZP_17738266.1| hypothetical protein VCHE46_1812 [Vibrio cholerae HE-46]
gi|340038637|gb|EGQ99611.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE39]
gi|341633171|gb|EGS58004.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE-09]
gi|408658821|gb|EKL29880.1| hypothetical protein VCHE40_1805 [Vibrio cholerae HE-40]
gi|408664871|gb|EKL35695.1| hypothetical protein VCHE46_1812 [Vibrio cholerae HE-46]
Length = 362
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 161/358 (44%), Gaps = 87/358 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ P DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGPYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLL---SSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+W IP+G LCP +P R++YIH + DLL + + P+ +V DIG GANCIYP
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKDNPKLAPS------QVTALDIGVGANCIYP 161
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G + GWS+VGSD+ V+++ A V+SN + IE R NS+
Sbjct: 162 IVGVTEYGWSWVGSDIDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHI----------- 210
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
FN G++ E++ CNPPF
Sbjct: 211 ------------------------FN----------------GIIGANERYTVTTCNPPF 230
Query: 252 FESMEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRI 286
S+ +A +P+ + GG E+ C GGE AFI ++
Sbjct: 231 HASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGGQKAELWCPGGEAAFIGKM 290
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 291 AVESQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|253997292|ref|YP_003049356.1| putative SAM-dependent methyltransferase [Methylotenera mobilis
JLW8]
gi|253983971|gb|ACT48829.1| rRNA (adenine-N(6)-)-methyltransferase [Methylotenera mobilis JLW8]
Length = 315
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 158/356 (44%), Gaps = 80/356 (22%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +HP+N++ E DF L + P+V + G +D+ D + + L + LL
Sbjct: 7 KSALHPRNRHRERY-DFEALIQTSAALAPYVKLNAYGDASVDFADAQSVKALNQALLKQF 65
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS--NIIPTTSRNGDKVKGFDIGTGANCI 129
+ ++ W IP LCP +P R++Y+H++ DLLS +P G V+ DIG GAN I
Sbjct: 66 YAVDAWDIPKHYLCPPIPGRADYLHYLADLLSEAHGKVP----RGSSVRVLDIGVGANMI 121
Query: 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
YPL+G GW FVG+D+ AL A++ + +N + ++IE+R
Sbjct: 122 YPLIGTREYGWRFVGADIDAKALGNAQQIIDANA-LGDVIELRL---------------- 164
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
+A P+S + G+++ E F +CNP
Sbjct: 165 -----------------QARPAS------------------IFKGMIQPDELFALTMCNP 189
Query: 250 PFFESMEEA---------GLNPKTS-----------CGGTPEEMVCSGGERAFITRIIED 289
PF S+ EA GL + GG E+ C+GGE F+T ++++
Sbjct: 190 PFHGSLAEAQAGTQRKWRGLGKHVAKPSGNKHAALNFGGQGAELYCAGGEEGFLTAMVKE 249
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
S W+TS+V + +NL L L V VKT QGQ +AW+F+
Sbjct: 250 SQQYAAQCVWFTSLVSKATNLPSLYRALNSVQAREVKTIAMTQGQKQSRIVAWTFL 305
>gi|238893861|ref|YP_002918595.1| putative SAM-dependent methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|238546177|dbj|BAH62528.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 250
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 141/303 (46%), Gaps = 73/303 (24%)
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGF 120
+ + LL H + + W IPDG LCP VP R++YIH + DLL+ S +P +
Sbjct: 1 MNKALLAHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAGDSGEVPKDATI------L 54
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
DIGTGAN IYPL+GA GW F GS++ A A+ + NP ++ I +R+
Sbjct: 55 DIGTGANLIYPLIGAHEYGWRFTGSEINPQAFASAQAIINGNPGLTRQIRLRR------- 107
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
Q ES Q+ +H GV+ E
Sbjct: 108 ------------QKES--------------------------QAIFH------GVIHKNE 123
Query: 241 QFDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRII 287
+D +CNPPF +S E A GL ++ GG +E+ C GGE AFI+++I
Sbjct: 124 TYDATLCNPPFHDSAESARAGGERKRRNLGLGAESGLNFGGQQQELWCEGGEVAFISQMI 183
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347
+S A + +W+TS+V R NL L L +VG V E QGQ +AWSF+
Sbjct: 184 RESQAFARQVKWFTSLVSRGDNLPPLYRLLTEVGAVKVVKKEMAQGQKQSRFIAWSFMDD 243
Query: 348 ARK 350
A++
Sbjct: 244 AKR 246
>gi|149371846|ref|ZP_01891165.1| putative SAM-dependent methyltransferase [unidentified eubacterium
SCB49]
gi|149354986|gb|EDM43547.1| putative SAM-dependent methyltransferase [unidentified eubacterium
SCB49]
Length = 321
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 164/354 (46%), Gaps = 75/354 (21%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+++ +HP+NK E D L ++ P+ FV ++ G + +++ A + L + LL
Sbjct: 3 KQKTRLHPRNKNRERY-DLEALVAVKPALAEFVKPNKHGEDSVVFSNPKAVKLLNQALLH 61
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS-SNI--IPTTSRNGDKVKGFDIGTGA 126
H +G+ +W PD L P +P R++Y+H + DLL+ SN IP GD + +DIG GA
Sbjct: 62 HYYGVAHWEFPDEYLTPPIPGRADYLHHVADLLAGSNFGRIP----EGDLITCYDIGVGA 117
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP+LG GW+F+GSD+ +++ A K++
Sbjct: 118 NCIYPILGVVEYGWNFIGSDINQASIDIANKHI--------------------------- 150
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
E+N + G ++ E + +S +F GV+ E D I
Sbjct: 151 --------EANEILQGKIELEFQENSKDAF----------------FGVIARDEIIDISI 186
Query: 247 CNPPFFESMEEA---------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
CNPPF S +A P + GG +E+VC GGE +FIT +I +S
Sbjct: 187 CNPPFHASKADAVAGTKRKIKNLTGEDNETPIQNFGGVHQELVCLGGELSFITNMIRESA 246
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+T++V ++SN++ + ++K T +K G +AWSF+
Sbjct: 247 RYGGNCFWFTTLVSKQSNVRAIQKIIKKHEATELKVIPMGTGNKSTRLVAWSFL 300
>gi|328768130|gb|EGF78177.1| hypothetical protein BATDEDRAFT_91032 [Batrachochytrium
dendrobatidis JAM81]
Length = 275
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 143/300 (47%), Gaps = 65/300 (21%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
I++ D A RELT LL GL IP LCP VPNR +YI IEDLLS +
Sbjct: 24 IEFGDPKAVRELTCALLFKYFGLRLEIPLDSLCPPVPNRLDYILHIEDLLSE----SNPS 79
Query: 113 NGDKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171
V+G DIGTGA+CIYPLLG S WSF+ ++ + ++++A +NV N
Sbjct: 80 LDATVRGIDIGTGASCIYPLLGCSRNPKWSFLALEIDERSIDFATQNVNRN--------- 130
Query: 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231
S+Q +T + S P
Sbjct: 131 ----------SLQNCITV--------------------------------VKGSTQKP-- 146
Query: 232 LVGVVRDGEQFDFCICNPPFFESMEEAGLN-------PKTSCGGTPEEMVCSGGERAFIT 284
++ + D + +DFC+CNPPF+ EE ++ P + C G+ EM+ GGE AF+T
Sbjct: 147 IISLPNDNQMYDFCMCNPPFYSDEEEMRVSRSIKQQAPLSLCMGSQNEMLQPGGEVAFVT 206
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+IE+S L WYTS+VG + N + L + L + + +V+ + QG+T R L WSF
Sbjct: 207 SLIEESQILGCRITWYTSLVGFRENAQRLEALLHQKQIPVVRRAVYKQGRTSRSILTWSF 266
>gi|269962218|ref|ZP_06176571.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833049|gb|EEZ87155.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 391
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 156/357 (43%), Gaps = 87/357 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + P + +V + G I+++D A + L + LL + + +W IPD LCP
Sbjct: 81 DFKKLITAEPQLKSYVIKNPKGEDSINFSDPKAVKMLNKALLAAHYDIEYWDIPDTYLCP 140
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++Y+H + +LL + + + KV+ D+G GANCIYP++G + GW + GSD
Sbjct: 141 PIPGRADYVHRVAELLDGEVKGKYAHH--KVRALDVGVGANCIYPIVGVTQYGWHYTGSD 198
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ ++ A + N ++ IE+ +Q++ ESN
Sbjct: 199 VDPKSIGSARAITERNASLNGKIEL-----------VQQT-------SESN--------- 231
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL------ 260
+ G+++ +++D CNPPF S EEA +
Sbjct: 232 ------------------------IYRGIIQPNDRYDITTCNPPFHRSAEEAAMGSQRKL 267
Query: 261 ---------------------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
P + GG E+ C GGE AFI ++ +S
Sbjct: 268 DNLKANQRKKGVKVQANQAKTPQVKANKPALNFGGQNAELWCEGGEAAFIRKMANESHEF 327
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+T+++ +K N++ + +L K+GV ++ E QGQ +AWS++ +++
Sbjct: 328 SAQVLWFTTLISKKDNVRPMRKQLEKLGVKAIRIVEMSQGQKVSRFIAWSYMDKSQR 384
>gi|27366061|ref|NP_761589.1| 23S rRNA mA1618 methyltransferase [Vibrio vulnificus CMCP6]
gi|81447940|sp|Q8D935.1|RLMF_VIBVU RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|27362261|gb|AAO11116.1| RNA large subunit methyltransferase F [Vibrio vulnificus CMCP6]
Length = 364
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 153/364 (42%), Gaps = 85/364 (23%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL-LH 71
R +H +NK+ + DFA L PS PFV + G I ++D A + L + LL +
Sbjct: 42 RAGLHSRNKH-QGRYDFAKLTQALPSLAPFVIKNPKGEASISFSDSTAVKMLNKALLSAY 100
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
NW IP G LCP +P R++YIH + +LL + +KV+ DIG GAN IYP
Sbjct: 101 YQVANWDIPAGYLCPPIPGRADYIHRLAELLEGEVKGKFPH--EKVQALDIGVGANAIYP 158
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++ W + GSD+ ++E A++ SNP + +E++
Sbjct: 159 IIAICDYRWRYTGSDVDPKSIESAQRIADSNPVLQGQLELK------------------- 199
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+QD+S + G++ + F CNPPF
Sbjct: 200 LQDQSQH--------------------------------IFQGIIGPTDYFHVTTCNPPF 227
Query: 252 FESMEEAGL------------------------------NPKTSCGGTPEEMVCSGGERA 281
S +EA P + GG E+ C GGE +
Sbjct: 228 HASAQEAAFGTQRKLDNLAANRLKKGVTAKAGSQKISKNKPILNFGGQNSELWCQGGESS 287
Query: 282 FITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341
F+ R+ +S W++++V +K N++ L +L K+GV ++ E QGQ +A
Sbjct: 288 FLKRMANESERFAHQVLWFSTLVSKKDNVRPLRKQLEKLGVRSIRVVEMSQGQKVSRFVA 347
Query: 342 WSFV 345
WSF+
Sbjct: 348 WSFM 351
>gi|118356129|ref|XP_001011323.1| hypothetical protein TTHERM_00429990 [Tetrahymena thermophila]
gi|89293090|gb|EAR91078.1| hypothetical protein TTHERM_00429990 [Tetrahymena thermophila
SB210]
Length = 451
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 141/296 (47%), Gaps = 57/296 (19%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF LA YP +VF + GR IDWT+ A + L + +L + +W +P QL P
Sbjct: 75 DFDELAIHYPPLNDYVFINERGRTTIDWTNTAAHKTLNQAILAVQFKIVYWDMPQDQLIP 134
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
T+P+R NY+ WI + L S + + +++K DIGTGA+ IYP+LGAS WSF+ ++
Sbjct: 135 TIPSRLNYLEWIHNKLQS--LKINNEQSNQIKAIDIGTGASVIYPILGASKYNWSFIATE 192
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
++D + + A+K + +NP + +E+RK S +I + + KS
Sbjct: 193 LSDASYQNAKKIINNNPQLKNKVELRK-----SQGNIFKDIIQKS--------------- 232
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSC 266
DG+ F +CNPPFF EE + +
Sbjct: 233 -------------------------------DGD-ISFTMCNPPFFSEHEEKQI--WVNA 258
Query: 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGV 322
E +C GGE F+ ++ E+S + +TS+VG+++N + + L++ +
Sbjct: 259 QMKENEYICEGGELQFLKQMFEESKIFANQIKIFTSLVGKQTNFEQFLQYLKQQNI 314
>gi|429887567|ref|ZP_19369083.1| Ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
PS15]
gi|429225420|gb|EKY31672.1| Ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
PS15]
Length = 362
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 161/358 (44%), Gaps = 87/358 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ ID++D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTIDFSDPVAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLL---SSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+W IP+G LCP +P R++YIH + DLL + + P+ +V DIG GANCIYP
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKDNPKLAPS------QVTALDIGVGANCIYP 161
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G + GWS+VGSD+ V+++ A V+SN + IE R NS+
Sbjct: 162 IVGVTEYGWSWVGSDIDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHI----------- 210
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
FN G++ E++ CNPPF
Sbjct: 211 ------------------------FN----------------GIIGANERYTLTTCNPPF 230
Query: 252 FESMEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRI 286
S+ EA +P+ + GG E+ C GGE AFI ++
Sbjct: 231 HASLAEAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGGQKAELWCPGGEAAFIGKM 290
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S + W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 291 AVESQLFAEQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|400287018|ref|ZP_10789050.1| 23S rRNA mA1618 methyltransferase [Psychrobacter sp. PAMC 21119]
Length = 345
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 162/368 (44%), Gaps = 95/368 (25%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DFA+L P + +G P I+++D A R L + LL H +G+
Sbjct: 29 LHPRNPH-QGRYDFAVLTRALPELAKHTITNPNGEPTINFSDHQAVRVLNQALLAHYYGV 87
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSS-------NIIPTTSRNGDKVKGFDIGTGAN 127
+W IP+G LCP +P R++YIH++ DLL+ N+ PT G ++ DIGTGA+
Sbjct: 88 KFWDIPEGYLCPPIPGRADYIHYVADLLAQTSHINDDNLPPT----GKEIHALDIGTGAS 143
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYP++G+ GW F SD+ +++ A +NP + ++++
Sbjct: 144 AIYPIIGSQSYGWRFTASDIDPISVNTAALICDANPKLKGAVKVK--------------- 188
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+P+ F G++ + FD +C
Sbjct: 189 --------------------LQPNPKKFF----------------AGIIGRQDYFDVVVC 212
Query: 248 NPPFFESMEEA---------------GLNPKTSC----------------GGTPEEMVCS 276
NPPF S+EEA G N GG +E+
Sbjct: 213 NPPFHASLEEAMESNTRKQHNLQRHRGKNESEQVSRSSTKSGNAAQNLNFGGQHKELWSE 272
Query: 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTC 336
GGE F+T++I++S + W+TS+V + N+K L L+++ VT ++ E QGQ
Sbjct: 273 GGEITFLTKMIKESQDFAEHVGWFTSLVSKSENVKPLQLLLKQLDVTQMRIIEMSQGQKN 332
Query: 337 RWGLAWSF 344
LAW F
Sbjct: 333 TRILAWRF 340
>gi|374594513|ref|ZP_09667517.1| 23S rRNA m(6)A-1618 methyltransferase [Gillisia limnaea DSM 15749]
gi|373869152|gb|EHQ01150.1| 23S rRNA m(6)A-1618 methyltransferase [Gillisia limnaea DSM 15749]
Length = 285
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 158/342 (46%), Gaps = 71/342 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HPKN +++ D L YP ++F + G+ ID+++ A L + LL H + +
Sbjct: 1 MHPKNVHNQEY-DMEALTGSYPELSRYIFQNDFGKTTIDFSNPKAILHLNKALLKHHYEI 59
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+ LC +P R++YIH++ D L+ I S +K DIG GANCIYP+LG
Sbjct: 60 ASWNIPEDYLCAPIPGRADYIHYLADFLAEEGIDPKS-----IKELDIGVGANCIYPILG 114
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A + W G D++ ++ A+ NV +N + + IEI K QD
Sbjct: 115 ARIYNWKMTGCDISLTSVNAAKANVNANSGLKDFIEI------------------KHQQD 156
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
++ + G++ G FDF +CNPPF S
Sbjct: 157 PAH---------------------------------IFTGIIAPGTYFDFSMCNPPFHAS 183
Query: 255 MEEA-----------GLNPKT-SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
EEA G++ T + GG E+ C+GGE FI R+I +S+A K W+T
Sbjct: 184 AEEAKKTSLKKLKNLGISGTTLNFGGQANELWCNGGETLFIKRMIRESLAFKTQVGWFTC 243
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+V +K NL + +L K+ K+ E QG +AW F
Sbjct: 244 LVSKKENLPKIYKQLIKLKAP-HKSIEMTQGNKKSRIIAWKF 284
>gi|359434923|ref|ZP_09225165.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20652]
gi|357918498|dbj|GAA61414.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20652]
Length = 310
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 163/354 (46%), Gaps = 76/354 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N++ +N DF LL + +P+ PFV + G ID++D A + L +
Sbjct: 2 KENKARSKLHPRNQH-KNGYDFDLLTTEHPALLPFVITTPAGTKSIDFSDNKAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +++W IP LCP +P R +YIH++ DLLS + IP G ++K DIG
Sbjct: 61 LLKAHYSIDFWDIPAHNLCPPIPGRVDYIHYLADLLSDDNQKKIPF----GKQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN +YPL G S W F GSD+ +++ A++ I++ ++
Sbjct: 117 TGANLVYPLTGTSEYKWHFTGSDIDAASIKIAKQ-------IAQFNGLK----------- 158
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+T K +D S++ F + YH
Sbjct: 159 ---VTLKHQKDASHI-----------------FKGVINQKELYH---------------- 182
Query: 244 FCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDS 290
+CNPPF S EEA G P + GG E+ C GGE FI+ +I++S
Sbjct: 183 LTLCNPPFHASAEEATKGSERKWKNLGKTPSNALNFGGQNNELWCDGGEVKFISNMIKES 242
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ + W+TS+V +K N+ L L+ + K + QGQ +AWS+
Sbjct: 243 EDVAEQVMWFTSLVSKKDNIAPLEEVLKTHPIAEYKIVDMAQGQKISRFIAWSY 296
>gi|419837389|ref|ZP_14360827.1| hypothetical protein VCHC46B1_2569 [Vibrio cholerae HC-46B1]
gi|421344338|ref|ZP_15794741.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-43B1]
gi|423735335|ref|ZP_17708534.1| hypothetical protein VCHC41B1_2114 [Vibrio cholerae HC-41B1]
gi|424009679|ref|ZP_17752617.1| hypothetical protein VCHC44C1_2167 [Vibrio cholerae HC-44C1]
gi|395940418|gb|EJH51099.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-43B1]
gi|408630178|gb|EKL02818.1| hypothetical protein VCHC41B1_2114 [Vibrio cholerae HC-41B1]
gi|408855937|gb|EKL95632.1| hypothetical protein VCHC46B1_2569 [Vibrio cholerae HC-46B1]
gi|408864039|gb|EKM03504.1| hypothetical protein VCHC44C1_2167 [Vibrio cholerae HC-44C1]
Length = 362
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 161/358 (44%), Gaps = 87/358 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ P DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGPYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLL---SSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+W IP+G LCP +P R++YIH + DLL + + P+ +V DIG GANCIYP
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKDNPKLAPS------QVTALDIGVGANCIYP 161
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G + GWS+VGSD+ V+++ A V+SN
Sbjct: 162 IVGITEYGWSWVGSDIDPVSIQQASLIVQSN----------------------------- 192
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ GH++ + +S FN G++ E++ CNPPF
Sbjct: 193 ------SKLQGHIECRLQKNSQHIFN----------------GIIGANERYTLTTCNPPF 230
Query: 252 FESMEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRI 286
S+ EA +P+ + GG E+ C GGE AFI ++
Sbjct: 231 HASLAEAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGGQKAELWCPGGEAAFIGKM 290
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+S + W+T+++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 291 AVESQLFAEQVLWFTTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSF 348
>gi|422922895|ref|ZP_16956066.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
BJG-01]
gi|341644703|gb|EGS68882.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
BJG-01]
Length = 362
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGGNERYTLTTCNPPFHAS 233
Query: 255 MEEA-------------------------GLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A +P+ + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTSSHPRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+T+++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 SQQFAEQVLWFTTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSF 348
>gi|229523707|ref|ZP_04413112.1| hypothetical protein VCA_001277 [Vibrio cholerae bv. albensis
VL426]
gi|229337288|gb|EEO02305.1| hypothetical protein VCA_001277 [Vibrio cholerae bv. albensis
VL426]
Length = 362
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKAVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GWS+VGSD+ V+++ A S+
Sbjct: 165 ATEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNAKLQGHIECRLQKNSQHIFN----------------GIIGGNERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|392534301|ref|ZP_10281438.1| 23S rRNA mA1618 methyltransferase [Pseudoalteromonas arctica A
37-1-2]
Length = 310
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 160/354 (45%), Gaps = 76/354 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ R +HP+N + +N DF LL + +P+ PFV + G ID++D A + L +
Sbjct: 2 KENNTRSKLHPRNLH-KNGYDFDLLTTEHPALLPFVITTPAGTKSIDFSDNKAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +++W IP+ LCP +P R +YIH++ DLLS + IP G ++K DIG
Sbjct: 61 LLKAHYNIDFWDIPEHNLCPPIPGRVDYIHYLADLLSDDNQQQIPL----GKQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN +YPL G S W F G+D+ +++ A+ +I + +N + T
Sbjct: 117 TGANLVYPLTGTSEYKWHFTGTDIDAASVKIAK-------------QIAQFNNLKITLKQ 163
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
Q+ ++S F + YH
Sbjct: 164 QK-------------------------NASHIFKGVVNQKDLYH---------------- 182
Query: 244 FCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDS 290
+CNPPF S EEA G P ++ GG E+ C GGE FI+ +I++S
Sbjct: 183 LTLCNPPFHASEEEASKGSERKWKNLGKTPSSALNFGGHNNELWCEGGEVQFISNMIKES 242
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V +K N+ L L+ + K + QGQ +AW++
Sbjct: 243 EDFAEQVLWFTSLVSKKDNIAALEEVLKAHPIAQYKIVDMAQGQKISRFIAWTY 296
>gi|424659394|ref|ZP_18096644.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE-16]
gi|408052438|gb|EKG87478.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE-16]
Length = 362
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 160/355 (45%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V+ DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPKLNPSQVRALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGGNERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|255535851|ref|YP_003096222.1| SAM-dependent methyltransferase [Flavobacteriaceae bacterium
3519-10]
gi|255342047|gb|ACU08160.1| SAM-dependent methyltransferase [Flavobacteriaceae bacterium
3519-10]
Length = 327
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 75/356 (21%)
Query: 9 RREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVL 68
+ E+ +H +NK E D L P E + ++ G +D+ + A + L + L
Sbjct: 5 KNTEKTRLHLRNKNRERY-DLDALKIAVPELEKHIKANKYGEESVDFANPEAVKLLNKAL 63
Query: 69 LLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGT 124
L H +G+ NW P LCP +P R++Y+H++ DLL + IPT G K+ DIG
Sbjct: 64 LSHYYGIKNWDFPAENLCPPIPGRADYLHYMADLLGQSNFGTIPT----GAKITALDIGV 119
Query: 125 GANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQ 184
GA+CIYP++GA+ GW+F+GSD+ + +++ A+K V++N +S IEIR N E+
Sbjct: 120 GASCIYPIIGATEYGWNFIGSDIDEQSVDSAQKIVEANEALSGKIEIRLQKNPEA----- 174
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
++ ++ D
Sbjct: 175 ----------------------------------------------FFKNIISPDDKIDL 188
Query: 245 CICNPPFFESMEEA------------GLNPKTS---CGGTPEEMVCSGGERAFITRIIED 289
+CNPPF S E+A G +T+ G E++ GGE FI +I +
Sbjct: 189 TVCNPPFHSSAEDAHKGSLRKIKNLSGKKTETAELNFAGISNELIYDGGEIGFIRNMILE 248
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
S Q W++++V ++SN+K + L +V +KT G +AW+F+
Sbjct: 249 SKDFAQNCYWFSTLVSKESNMKKIYKMLEEVKTMHLKTIPMGTGNKSSRIIAWTFL 304
>gi|58264968|ref|XP_569640.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225872|gb|AAW42333.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 482
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 157/338 (46%), Gaps = 64/338 (18%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H N Y + PDFA LAS YP F PFV S DG I++ D A RELT+ LL D L
Sbjct: 1 MHQNNPYLKQKPDFARLASRYPKFAPFVSVSEDGYTSINFQDPTALRELTKCLLKEDWNL 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ + + +LCPT+PNR +YI+ + DL +P++S ++ DIGTGA IYP+L A
Sbjct: 61 DVDLREDRLCPTIPNRLDYIYHVLDLEPH--LPSSSLRPLRI--LDIGTGATAIYPILLA 116
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
L D VA E E + K+ ++
Sbjct: 117 RL------RPDSRIVATEIDESSYNH---------------------------AKATLEK 143
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR---DGEQFDFCICNPPFF 252
+N+ PSS + P P+L ++ E +D ICNPPFF
Sbjct: 144 NNI----------PPSSITVLKSPTPD-------PILFPLLECKGKSEDWDLTICNPPFF 186
Query: 253 ESMEEA--GLNPK-----TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
S +E G+ K + + E++ GGE AFIT +I +S+ + WYT++VG
Sbjct: 187 ASSQEMLQGMELKDRQAHAAPTASDNELITRGGELAFITSMIRESIDIGHKCTWYTTLVG 246
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
+ S+L+ LI LR+ + Q +T RW L WS
Sbjct: 247 KYSSLQPLIETLREFKIDNYFVINMKQSRTSRWILGWS 284
>gi|392545286|ref|ZP_10292423.1| 23S rRNA mA1618 methyltransferase [Pseudoalteromonas rubra ATCC
29570]
Length = 288
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 156/347 (44%), Gaps = 77/347 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+NK+ + DFA L + P+ + + G ID++D A L + LL D+G+
Sbjct: 1 MHPRNKHQQGY-DFARLCQVNPALTQHLRNNPHGDNTIDFSDRIAVVALNQALLASDYGV 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---IPTTSRNGDKVKGFDIGTGANCIYP 131
W +P+ LCP VP R++YIH + DLL+ + IPT G +++ DIGTGAN IYP
Sbjct: 60 KLWQLPEPFLCPPVPGRADYIHALADLLADDNQGEIPT----GKQIRCLDIGTGANLIYP 115
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G + GW F GSD+ +A+ A+ K+N G
Sbjct: 116 LIGQAEYGWQFTGSDINPMAVSVAQTIAKAN--------------------------GLG 149
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
++ + D Q+ +H G++ E + +CNPPF
Sbjct: 150 IKIKQQKDQ----------------------QAIFH------GIINAKETYHLTMCNPPF 181
Query: 252 FESME--EAGLNPK------------TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
ES + +AG K + GG E+ C GGE FI +I +S
Sbjct: 182 HESEQAAQAGTARKWRNLGKSQKPGQLNFGGHAPELWCPGGELTFIKSMIHESQDFADQV 241
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+V +K NL L L+ V + VK + QGQ +AW F
Sbjct: 242 GWFTSLVSKKDNLPALKKALQAVKASEVKVIDMQQGQKVSRFIAWCF 288
>gi|359441199|ref|ZP_09231100.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20429]
gi|358036906|dbj|GAA67349.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20429]
Length = 310
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 161/354 (45%), Gaps = 76/354 (21%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N + +N DF LL + +P+ PFV + G ID++D A + L +
Sbjct: 2 KENKARSKLHPRNLH-KNGYDFDLLTTEHPALLPFVITTPAGTKSIDFSDNKAVKTLNQG 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +++W IP+ LCP +P R +YIH++ DLLS + IP G ++K DIG
Sbjct: 61 LLKAHYNIDFWDIPEHNLCPPIPGRVDYIHYLADLLSDDNQQQIPL----GKQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN +YPL G S W F G+D+ +++ A++ + N +
Sbjct: 117 TGANLVYPLTGTSEYKWHFTGTDIDAASVKIAKQIAQFN-------------------GL 157
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
+ SL + + ++S F + YH
Sbjct: 158 KISL-------------------KHQKNASHIFKGVINQKDLYH---------------- 182
Query: 244 FCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDS 290
+CNPPF S EEA G P ++ GG E+ C GGE FI+ II++S
Sbjct: 183 LTLCNPPFHASEEEASKGSERKWKNLGKTPSSTLNFGGHNNELWCEGGEVQFISNIIKES 242
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+TS+V +K N+ L L+ + K + QGQ +AWS+
Sbjct: 243 EDFAEQVLWFTSLVSKKDNIAALEEVLKAHPIAQYKIVDMAQGQKISRFIAWSY 296
>gi|254506279|ref|ZP_05118422.1| methyltransferase [Vibrio parahaemolyticus 16]
gi|219550759|gb|EED27741.1| methyltransferase [Vibrio parahaemolyticus 16]
Length = 341
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 157/364 (43%), Gaps = 90/364 (24%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
KN DF L + P + +V + G I ++D A L + LL + + + W
Sbjct: 31 KNNLHHGRYDFTKLIAALPELKNYVIKTPKGEQSIAFSDPVAVTLLNKALLAYHYNVTSW 90
Query: 79 -IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD----KVKGFDIGTGANCIYPLL 133
IP G LCP +P R++Y+H + +LLS++ +GD ++ DIG GANCIYP++
Sbjct: 91 DIPQGYLCPPIPGRADYVHRLAELLSTD-------SGDAPQQQINALDIGVGANCIYPIV 143
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G + GW +VGSD+ V++E A K N +++ IE R +Q
Sbjct: 144 GVTQYGWHYVGSDVDPVSVENANNIAKRNRVLNDRIECR-------------------LQ 184
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
ES G+++ GE++ CNPPF +
Sbjct: 185 KESRH--------------------------------FFKGIIKSGERYHVTTCNPPFHK 212
Query: 254 SMEEA--------------------GLN-------PKTSCGGTPEEMVCSGGERAFITRI 286
S++EA +N P + GG E+ C GGE AFI +
Sbjct: 213 SLQEAQQGTERKINNLSANKSKRGQAVNRAQSKPSPILNFGGQKAELWCPGGEAAFIKNM 272
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
+S W+++++ +K N++++ L K G + V+ E QGQ +AW+F
Sbjct: 273 AFESKEFADQVLWFSTLISKKENVRWMRKNLEKAGASEVRIVEMSQGQKISRFMAWTFKT 332
Query: 347 PARK 350
A +
Sbjct: 333 DAER 336
>gi|422297225|ref|ZP_16384864.1| hypothetical protein Pav631_1201 [Pseudomonas avellanae BPIC 631]
gi|407991414|gb|EKG33282.1| hypothetical protein Pav631_1201 [Pseudomonas avellanae BPIC 631]
Length = 341
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 161/342 (47%), Gaps = 42/342 (12%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 36 EKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLKA 94
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+G+ +W IP LCP +P R++Y+H++ D+L+ + R G VK DIGTGANCIY
Sbjct: 95 FYGIAHWDIPADYLCPPIPGRADYLHFLADVLAEDRAGMIPR-GPSVKALDIGTGANCIY 153
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG S GW FVGSD+ A+ A VK+N + + I +R N + + E
Sbjct: 154 PLLGHSDYGWQFVGSDIDSTAVAAATAIVKAN-GLHKAISVRLQGNRKQI--LLELCDSN 210
Query: 191 SVQDES--NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
D S N G +DE S L G PVL
Sbjct: 211 ERFDVSLCNPPFHGSLDEAQRGSQRKWRAL--GKADPKRKLPVL---------------- 252
Query: 249 PPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS 308
+ GG +E+ C GGE F+T++I++S L W++++V + S
Sbjct: 253 ----------------NFGGQSQELWCEGGEIGFVTQLIQESARLPGLVVWFSTLVSKAS 296
Query: 309 NLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
NL + S L+K G VK E QGQ +AW+F+ A++
Sbjct: 297 NLPPIQSALKKAGALEVKVVEMGQGQKQSRFVAWTFLDKAQR 338
>gi|419830142|ref|ZP_14353627.1| hypothetical protein VCHC1A2_2527 [Vibrio cholerae HC-1A2]
gi|419833778|ref|ZP_14357236.1| hypothetical protein VCHC61A2_2425 [Vibrio cholerae HC-61A2]
gi|422917530|ref|ZP_16951850.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-02A1]
gi|423821812|ref|ZP_17716450.1| hypothetical protein VCHC55C2_1839 [Vibrio cholerae HC-55C2]
gi|423854939|ref|ZP_17720245.1| hypothetical protein VCHC59A1_1884 [Vibrio cholerae HC-59A1]
gi|423997960|ref|ZP_17741214.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-02C1]
gi|424016852|ref|ZP_17756684.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-55B2]
gi|424019779|ref|ZP_17759567.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-59B1]
gi|424625140|ref|ZP_18063603.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-50A1]
gi|424629622|ref|ZP_18067913.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-51A1]
gi|424633670|ref|ZP_18071772.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-52A1]
gi|424636751|ref|ZP_18074761.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-55A1]
gi|424640664|ref|ZP_18078549.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-56A1]
gi|424648730|ref|ZP_18086395.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-57A1]
gi|341637488|gb|EGS62168.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-02A1]
gi|408013191|gb|EKG50927.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-50A1]
gi|408018792|gb|EKG56220.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-52A1]
gi|408024005|gb|EKG61146.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-56A1]
gi|408024452|gb|EKG61554.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-55A1]
gi|408033607|gb|EKG70143.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-57A1]
gi|408055890|gb|EKG90794.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-51A1]
gi|408619915|gb|EKK92927.1| hypothetical protein VCHC1A2_2527 [Vibrio cholerae HC-1A2]
gi|408635293|gb|EKL07511.1| hypothetical protein VCHC55C2_1839 [Vibrio cholerae HC-55C2]
gi|408641951|gb|EKL13715.1| hypothetical protein VCHC59A1_1884 [Vibrio cholerae HC-59A1]
gi|408650039|gb|EKL21342.1| hypothetical protein VCHC61A2_2425 [Vibrio cholerae HC-61A2]
gi|408853017|gb|EKL92833.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-02C1]
gi|408860307|gb|EKL99946.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-55B2]
gi|408867847|gb|EKM07201.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HC-59B1]
Length = 362
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ + A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFANPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPKLNPSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A V+SN
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQASLIVQSN-------------------------------- 192
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GH++ + +S FN G++ E++ CNPPF S
Sbjct: 193 ---SKLQGHIECRLQKNSQHIFN----------------GIIGANERYTVTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A +P+ + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|86133826|ref|ZP_01052408.1| SAM-dependent methyltransferase [Polaribacter sp. MED152]
gi|85820689|gb|EAQ41836.1| SAM-dependent methyltransferase [Polaribacter sp. MED152]
Length = 284
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 76/342 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N++++ DF +L P E F+ ++ ID+++ A +EL + LL +
Sbjct: 6 LHPDNRFNKGY-DFDVLVKQNPILEEFIITNKYNSITIDFSNPQAVKELNKALLFTYKNI 64
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+ W PD LCP +P R +YIH + DLL N +K DIGTGA CIYPLLG
Sbjct: 65 SVWDFPDENLCPPIPGRLDYIHHLSDLLG---------NEKNIKILDIGTGATCIYPLLG 115
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ WSFV +D+ AL+ A+ N+ N + ++ IE+R+
Sbjct: 116 VAEYNWSFVATDIDLDALDTAQDNIDDN-NFTDNIELRQ--------------------- 153
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ +L ++ D + F +CNPPF++S
Sbjct: 154 ------------------------------QFKEEHILKDILEDDDSFSATMCNPPFYKS 183
Query: 255 MEEA-----------GLNPKTSCGGTPEEMVCSGGERAFI-TRIIEDSVALKQTFRWYTS 302
EEA G N + G E+ GGE+AF+ T + E S+ K++ +W+TS
Sbjct: 184 AEEAQGANKRKSRNLGNNAVRNFSGNNNELWYVGGEKAFLHTYLYESSLQPKKS-KWFTS 242
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+V +K N++ L + +K+GVT KT QG + W F
Sbjct: 243 LVSKKENVESLKASSQKLGVTEFKTIPMQQGNKVTRIVCWRF 284
>gi|423882111|ref|ZP_17723843.1| hypothetical protein VCHC60A1_1835 [Vibrio cholerae HC-60A1]
gi|408641765|gb|EKL13536.1| hypothetical protein VCHC60A1_1835 [Vibrio cholerae HC-60A1]
Length = 339
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 158/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ + A + L + LL +G+
Sbjct: 26 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFANPIAVKLLNKALLALHYGV 84
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 85 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPKLNPSQVTALDIGVGANCIYPIVG 141
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A V+SN + IE R NS+
Sbjct: 142 VTEYGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQHI-------------- 187
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
FN G++ E++ CNPPF S
Sbjct: 188 ---------------------FN----------------GIIGANERYTVTTCNPPFHAS 210
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A +P+ + GG E+ C GGE AFI ++ +
Sbjct: 211 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGGQKAELWCPGGEAAFIGKMAVE 270
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 271 SQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 325
>gi|153802250|ref|ZP_01956836.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124122232|gb|EAY40975.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 362
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 160/355 (45%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPKLNPSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GWS+VGSD+ V+++ A S+
Sbjct: 165 ATEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGGNERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+T+++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQLFAEQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|342881256|gb|EGU82174.1| hypothetical protein FOXB_07305 [Fusarium oxysporum Fo5176]
Length = 739
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 141/283 (49%), Gaps = 49/283 (17%)
Query: 63 ELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
+LT+ LL D GL +PD +LCP V NR NY+ W++ LL S R K+ G DI
Sbjct: 352 QLTKSLLKLDFGLKLELPDDRLCPPVLNRHNYLMWLKGLLDSTSYEKQDR---KIVGLDI 408
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
GTGA+CIYPL+G + W F+ +D+ +LE+A KNV N + I++ + ++ S
Sbjct: 409 GTGASCIYPLMGCTERDWDFIATDIDPKSLEYARKNVALN-GLDSRIKVVERKPTDVLIS 467
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+ D+ N++ S SF + PP
Sbjct: 468 L----------DDLNVN-------------SISFTM--------SNPP------------ 484
Query: 243 DFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F ES ++ P T+C G EMV GGE F+ R++++S+AL++ +WYTS
Sbjct: 485 -FYKSEEELLESAKQKSRPPFTACTGAKVEMVTDGGEVEFVDRMLKESLALQERVQWYTS 543
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
M G ++L + KLR + TEF+QG +T RW +AWSF
Sbjct: 544 MFGFLTSLIEFVDKLRDHKIDNYAVTEFIQGSKTRRWAVAWSF 586
>gi|384424675|ref|YP_005634033.1| Ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
LMA3984-4]
gi|327484228|gb|AEA78635.1| Ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
LMA3984-4]
Length = 362
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 158/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ ID++D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTIDFSDPVAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E + CNPPF S
Sbjct: 190 QSNSKLQGHIEFRLQKNSQHIFN----------------GIIGANELYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+++++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFSTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSF 348
>gi|326484674|gb|EGE08684.1| DUF890 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 432
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 169/342 (49%), Gaps = 62/342 (18%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF LA P+F+ + + R+D+++ +A R+LT LL D GL +PD +LCP
Sbjct: 13 DFTALALQDPAFKE----TLSAKGRLDFSNPDAVRQLTVSLLRRDFGLEVELPDDRLCPP 68
Query: 88 VPNRSNYIHWIEDLLS-SNIIPTTSRNGDK-VKGFDIGTGANCIYPLLGA-SLLGWSFVG 144
VPNR NYI W++DL+ + N D+ V G DIGTG++CIYPLLGA W+FV
Sbjct: 69 VPNRLNYILWLQDLIDCTGDDYHEGFNADRDVVGLDIGTGSSCIYPLLGAVHRKRWTFVA 128
Query: 145 SDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP--SIQESLTGKSVQDESNMDMSG 202
+D+ L++A +NV+ N S + + V + P IQ + ++ + +
Sbjct: 129 TDIDKKNLQYARQNVQRNNLQSRIQVVDSVPDGPLIPLDRIQLKMLDFTMCNPPFYESHE 188
Query: 203 HMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNP 262
M + AE + ++ GA++
Sbjct: 189 EMKQLAEEKQNEPLSVCTGAET-------------------------------------- 210
Query: 263 KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGV 322
EM+ GGE AF+ ++I++S+ L++ RWYTSM+G++S+L LI +L+ +
Sbjct: 211 ---------EMITPGGEVAFVKKMIQESLHLREAVRWYTSMLGKRSSLLSLIDELQSLDN 261
Query: 323 TIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVAEKKNLS 363
TEF+QG +T RW +AWS+ K I P + +++S
Sbjct: 262 KNWAVTEFIQGDKTKRWAIAWSW-----KDIRPTMGVSRSVS 298
>gi|320156575|ref|YP_004188954.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
gi|319931887|gb|ADV86751.1| predicted metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
Length = 364
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 152/364 (41%), Gaps = 85/364 (23%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL-LH 71
R +H +NK+ + DFA L PS P V + G I ++D A + L + LL +
Sbjct: 42 RAGLHSRNKH-QGRYDFAKLTQALPSLAPCVIKNPKGEASISFSDSTAVKMLNKALLSAY 100
Query: 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
NW IP G LCP +P R++YIH + +LL + +KV+ DIG GAN IYP
Sbjct: 101 YQVANWDIPAGYLCPPIPGRADYIHRLAELLEGEVKGKFPH--EKVQALDIGVGANAIYP 158
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++ W + GSD+ ++E A++ SNP + +E++
Sbjct: 159 IIAICDYRWRYTGSDVDPKSIESAQRIADSNPVLQGQLELK------------------- 199
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+QD+S + G++ + F CNPPF
Sbjct: 200 LQDQSQH--------------------------------IFQGIIGPTDYFHVTTCNPPF 227
Query: 252 FESMEEAGL------------------------------NPKTSCGGTPEEMVCSGGERA 281
S +EA P + GG E+ C GGE +
Sbjct: 228 HASAQEAAFGTQRKLDNLAANRLKKGVTAKAGSQKISKNKPILNFGGQNSELWCQGGESS 287
Query: 282 FITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341
F+ R+ +S W++++V +K N++ L +L K+GV ++ E QGQ +A
Sbjct: 288 FLKRMANESERFAHQVLWFSTLVSKKDNVRPLRKQLEKLGVRSIRVVEMSQGQKVSRFVA 347
Query: 342 WSFV 345
WSF+
Sbjct: 348 WSFM 351
>gi|163749855|ref|ZP_02157100.1| hypothetical protein KT99_01886 [Shewanella benthica KT99]
gi|161330369|gb|EDQ01348.1| hypothetical protein KT99_01886 [Shewanella benthica KT99]
Length = 415
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 164/412 (39%), Gaps = 115/412 (27%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
K + + ++ H +N + + DF L P +PFV + G ID++D A +
Sbjct: 50 KSKSVKSADKKGFHQRNLHKDGY-DFDTLTEASPELKPFVRPNPYGNLSIDFSDPQAVKA 108
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNI---------------- 106
L LL + + W IP G LCP +P R +Y+H++ DLL+ NI
Sbjct: 109 LNLALLKAHYRIESWDIPQGFLCPPIPGRVDYLHYVADLLAGNIPQQVSQEPSAGSVDGQ 168
Query: 107 -IPT---------------TSR--NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT 148
+P T+R G K+K DIGTGAN IY +LG GW F SD+
Sbjct: 169 NVPALINSVTNGLAKAATKTNRIPTGSKIKALDIGTGANGIYAILGIQSYGWQFTASDVD 228
Query: 149 DVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEA 208
+++ E +++N + + R
Sbjct: 229 PLSIVNVESIIQANLCLQGKFKTR------------------------------------ 252
Query: 209 EPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA---------- 258
L Q +HG ++ ++FD +CNPPF S+ EA
Sbjct: 253 ---------LQTDHQKVFHG------IINVDDRFDVTLCNPPFHSSLAEASEGSQRKLKN 297
Query: 259 ------------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
G N + GG E+ C GGE+ F+ +I +S K W+
Sbjct: 298 LAANRVAKGHKSEPAKVKGANVDLNFGGQKAELWCEGGEKQFLLNMIRESADFKTQCLWF 357
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII 352
TS+V ++ NLK + L+K G +KT + QG LAWSF+ P ++ +
Sbjct: 358 TSLVSKQENLKPSYAALKKAGAVSIKTIDMAQGNKLTRVLAWSFLTPKQQAL 409
>gi|326471799|gb|EGD95808.1| hypothetical protein TESG_03273 [Trichophyton tonsurans CBS 112818]
Length = 430
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 169/342 (49%), Gaps = 62/342 (18%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF LA P+F+ + + R+D+++ +A R+LT LL D GL +PD +LCP
Sbjct: 13 DFTALALQDPAFKETL----SAKGRLDFSNPDAVRQLTVSLLRRDFGLEVELPDDRLCPP 68
Query: 88 VPNRSNYIHWIEDLLS-SNIIPTTSRNGDK-VKGFDIGTGANCIYPLLGA-SLLGWSFVG 144
VPNR NYI W++DL+ + N D+ V G DIGTG++CIYPLLGA W+FV
Sbjct: 69 VPNRLNYILWLQDLIDCTGDDYHEGFNADRDVVGLDIGTGSSCIYPLLGAVHRKRWTFVA 128
Query: 145 SDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP--SIQESLTGKSVQDESNMDMSG 202
+D+ L++A +NV+ N S + + V + P IQ + ++ + +
Sbjct: 129 TDIDKKNLQYARQNVQRNNLQSCIQVVDSVPDGPLIPLDRIQLKMLDFTMCNPPFYESHE 188
Query: 203 HMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNP 262
M + AE + ++ GA++
Sbjct: 189 EMKQLAEEKQNEPLSVCTGAET-------------------------------------- 210
Query: 263 KTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGV 322
EM+ GGE AF+ ++I++S+ L++ RWYTSM+G++S+L LI +L+ +
Sbjct: 211 ---------EMITPGGEVAFVKKMIQESLHLREAVRWYTSMLGKRSSLLSLIDELQSLDN 261
Query: 323 TIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVAEKKNLS 363
TEF+QG +T RW +AWS+ K I P + +++S
Sbjct: 262 KNWAVTEFIQGDKTKRWAIAWSW-----KDIRPTMGVSRSVS 298
>gi|343511776|ref|ZP_08748929.1| putative SAM-dependent methyltransferase [Vibrio scophthalmi LMG
19158]
gi|342797084|gb|EGU32740.1| putative SAM-dependent methyltransferase [Vibrio scophthalmi LMG
19158]
Length = 385
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 153/371 (41%), Gaps = 91/371 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N + + DF L P V + G I + D A + L + LL + +
Sbjct: 61 LHKRNVH-QGRYDFVRLVKALPELAKHVVKNPVGEATIRFDDPIAVKLLNKALLAEHYSV 119
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IP+G LCP +P R++YIH + DLLSS N ++ DIG GANCIYP++G
Sbjct: 120 TQWNIPEGYLCPPIPGRADYIHRLADLLSSE---APKLNHKLIRALDIGVGANCIYPIVG 176
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GW +VGSD+ V+ VDNS + + L G
Sbjct: 177 ATQYGWHYVGSDVDSVS----------------------VDNSNRIATENDVLVG----- 209
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
N++ D S H G+++ GE +D CNPPF S
Sbjct: 210 --NVECRLQSD-------------------SRH---FFQGIIQPGEYYDVTTCNPPFHSS 245
Query: 255 MEEA---------GLNP------------------KTSC--------GGTPEEMVCSGGE 279
+EEA LN KTS GG E+ C GGE
Sbjct: 246 LEEAQKGTERKIANLNAHKEKRGNVKAEKATSTPVKTSSKQSTTLNFGGQKAELWCPGGE 305
Query: 280 RAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWG 339
F+ + +S W+T+++ +K N+++L L KV V E QGQ
Sbjct: 306 ATFVKNLAYESEKFATQVLWFTTLISKKDNVRWLCKNLEKVAAKQVTIVEMSQGQKISRF 365
Query: 340 LAWSFVPPARK 350
+AWSF A++
Sbjct: 366 VAWSFKDQAQR 376
>gi|227540477|ref|ZP_03970526.1| SAM-dependent methyltransferase [Sphingobacterium spiritivorum ATCC
33300]
gi|227239801|gb|EEI89816.1| SAM-dependent methyltransferase [Sphingobacterium spiritivorum ATCC
33300]
Length = 304
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 158/351 (45%), Gaps = 69/351 (19%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+E + T+H +NK+ DF L P+ F+ + G+ ID+ D A EL + LL
Sbjct: 6 KEIKKTLHSRNKHISGY-DFQRLTKKNPALSGFLINNPAGQVTIDFADPKAVFELNKTLL 64
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
L + L W I LCP +P R++YIH++ DLL+ + R G +VK DIGTG++
Sbjct: 65 LLHYDLQHWEIGKNSLCPPIPGRADYIHYVADLLAKDHNGNIPR-GPQVKVLDIGTGSSL 123
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYP++G WSFVG+D+ +L A NS ++++S+
Sbjct: 124 IYPIIGHQEYKWSFVGTDIDSQSLHHAYM------------------NSSKNEALKKSIV 165
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +D+++ V GV+ GE++D +CN
Sbjct: 166 LREQKDKAH---------------------------------VFAGVILPGEKYDLVLCN 192
Query: 249 PPFFESMEE---------AGLN------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF+ S EE +N P + GG E+ GGE+AFI +I +S+
Sbjct: 193 PPFYGSREENWKSTTRKFQNVNKNKEALPVQNFGGNANELWYEGGEKAFIRTMIYESMDY 252
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
K W T++V K NLK L++ L ++ + QG LAW +
Sbjct: 253 KAQLGWCTTLVANKDNLKPLVAVLEFKKAKDIEIIKMEQGNKISRILAWRW 303
>gi|163746788|ref|ZP_02154145.1| putative SAM-dependent methyltransferase [Oceanibulbus indolifex
HEL-45]
gi|161379902|gb|EDQ04314.1| putative SAM-dependent methyltransferase [Oceanibulbus indolifex
HEL-45]
Length = 308
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 154/354 (43%), Gaps = 69/354 (19%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +HP+N + + DF L P E F+ + G+ +D+ D A R L R LL
Sbjct: 4 KTKLHPRNLHLDGY-DFERLVVQTPELEAFMIKNPVGQSTVDFQDPMAVRMLNRALLRTH 62
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + +W P G LCP +P R +YIH + DLL+ + + G +K DIGTGA+ +YP
Sbjct: 63 YDIEFWDFPAGYLCPPIPGRVDYIHHLADLLAKDNNLQEAPRGRHIKALDIGTGASLVYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L+G S GW F G D+ A++ + +
Sbjct: 123 LIGQSAYGWRFTGVDVDANAIK----------------------------------SARQ 148
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
++D + +D+ + +E + GV++ + F +CNPPF
Sbjct: 149 IRDVNKLDIDLRLQNNSE--------------------NIFRGVIQPDDVFHVTMCNPPF 188
Query: 252 FESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
S E+A G + K + GG E+ GGE FI R++ +S+ +
Sbjct: 189 HGSKEQANKGTQRKWASLGKGRSTKLNFGGRDAELWYPGGEIKFIARMVAESMDFAKQCL 248
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII 352
W+TS+V +K NL+ L L K V K E QGQ +AW++ ++ +
Sbjct: 249 WFTSLVSKKDNLQPLHRILGKARVAEYKVVEMAQGQKTSRFIAWTYFKKKQRTL 302
>gi|229529353|ref|ZP_04418743.1| hypothetical protein VCG_002448 [Vibrio cholerae 12129(1)]
gi|229333127|gb|EEN98613.1| hypothetical protein VCG_002448 [Vibrio cholerae 12129(1)]
Length = 389
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 155/355 (43%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L P + V + G+ I++ D A + L + LL +G+
Sbjct: 77 LHPRNRH-RGQYDFPALIKAVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 135
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W +P+G LCP +P R++YIH + DLL + + +V DIG GANCIYP++G
Sbjct: 136 TYWDVPEGFLCPPIPGRADYIHRVADLLLKD---NPKLSPSQVTALDIGVGANCIYPIVG 192
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A V+SN + IE R +NS+
Sbjct: 193 VTEYGWSWVGSDVDPVSIQQANLIVQSNSTLQGHIECRLQNNSQH--------------- 237
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G++ GE++ CNPPF
Sbjct: 238 ------------------------------------IFQGIIGAGERYTLTTCNPPFHAP 261
Query: 255 MEEA-------------------------GLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A P+ + GG E+ C GGE AFI ++ +
Sbjct: 262 LADAQQGTQRKLTNLQANQRKKGRLATPTSSQPRLNFGGQKAELWCPGGEAAFIGKMAVE 321
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W++S++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 322 SQQFAEQVLWFSSLISKGDNVRGMKKQLEKLGAQSIHVVEMAQGQKISRFIAWSF 376
>gi|332667369|ref|YP_004450157.1| ribosomal RNA large subunit methyltransferase F [Haliscomenobacter
hydrossis DSM 1100]
gi|332336183|gb|AEE53284.1| Ribosomal RNA large subunit methyltransferase F [Haliscomenobacter
hydrossis DSM 1100]
Length = 350
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 164/361 (45%), Gaps = 75/361 (20%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ E+ +HP+N++ +F LL + P FV + G ID+ D A +
Sbjct: 19 EKKKEHPTEKAQLHPRNRHRARY-NFKLLITSCPELADFVKPNVHGDESIDFADPVAVKL 77
Query: 64 LTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKG 119
L + LL + + NW IP+G LCP +P R++YIH I +LL S IP G ++
Sbjct: 78 LNKALLKQYYSIENWDIPEGYLCPPIPGRADYIHHIAELLGSYNFGKIP----QGQHIRC 133
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIG GANC+YP++G + GWSFVG+++ A+E A + +NP + + + R ++
Sbjct: 134 LDIGVGANCVYPIIGTNEYGWSFVGTEIDAQAIESANLIIAANPFLQDKVTCR----LQT 189
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
P+ + +Q E D+S
Sbjct: 190 KPA---DIFKGIIQAEEYFDLS-------------------------------------- 208
Query: 240 EQFDFCICNPPF--------------FESMEEAGLNPKT-SCGGTPEEMVCSGGERAFIT 284
ICNPPF ++++ + T + GG E+ C GGE AF+
Sbjct: 209 ------ICNPPFHASAEAADAATLRKLSNLQQQKVTEVTKNFGGQNMELWCEGGEEAFVR 262
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++ S + W++S++ ++++LK + L K G T VKT QG +AWSF
Sbjct: 263 EMVRQSRQFATSCFWFSSLISKQTHLKKVYEALTKAGATEVKTIPMGQGNKTSRIVAWSF 322
Query: 345 V 345
+
Sbjct: 323 L 323
>gi|121728440|ref|ZP_01681467.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|424591308|ref|ZP_18030740.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1037(10)]
gi|205829731|sp|A5F7R5.2|RLMF_VIBC3 RecName: Full=Putative ribosomal RNA large subunit
methyltransferase F; AltName: Full=23S rRNA mA1618
methyltransferase; AltName: Full=rRNA adenine
N-6-methyltransferase
gi|121629313|gb|EAX61747.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|408032293|gb|EKG68880.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
CP1037(10)]
Length = 362
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 158/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLL---LKENPKLNPSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIEFRLQKNSQHIFN----------------GIIGANERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+++++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFSTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFIAWSF 348
>gi|289823692|ref|ZP_06543304.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
Length = 294
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 150/330 (45%), Gaps = 73/330 (22%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G ANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVG--ANCIY 116
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 117 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 159
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 160 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 185
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
F +S A G N + GG +E+ C GGE AFI ++I +S ++
Sbjct: 186 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQTFRRQV 245
Query: 298 RWYTSMVGRKSNLKFLISKLRKVG-VTIVK 326
W+T++V R NL L L + G V +VK
Sbjct: 246 LWFTTLVSRGENLPPLYRALTEAGAVKVVK 275
>gi|300771264|ref|ZP_07081140.1| rRNA (adenine-N(6)-)-methyltransferase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761934|gb|EFK58754.1| rRNA (adenine-N(6)-)-methyltransferase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 304
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 159/351 (45%), Gaps = 69/351 (19%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+E + T+H +NK+ DF L P+ F+ + G+ ID+ D A EL + LL
Sbjct: 6 KEIKKTLHSRNKHISGY-DFQRLTKKNPALSGFLITNPAGQVTIDFADPKAVFELNKTLL 64
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANC 128
L + L W I LCP +P R++YIH++ DLL+ + R G +VK DIGTG++
Sbjct: 65 LLHYDLQHWEIGKNSLCPPIPGRADYIHYVADLLAKDHNGNIPR-GPQVKVLDIGTGSSL 123
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYP++G WSFVG+D+ +L A NS ++++S+
Sbjct: 124 IYPIIGHQEYKWSFVGTDIDAQSLHHAYM------------------NSSKNEALKKSIV 165
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ +D+++ V GV+ GE++D +CN
Sbjct: 166 LREQKDKAH---------------------------------VFTGVILPGEKYDLVLCN 192
Query: 249 PPFFESMEE---------AGLN------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
PPF+ S EE +N P + GG E+ GGE+AFI ++I +S+
Sbjct: 193 PPFYGSREENWKSTTKKFQNVNKNKEALPVQNFGGNANELWYEGGEKAFIRKMIYESMDY 252
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W T++V K NLK L++ L ++ + QG LAW +
Sbjct: 253 QAQLGWCTTLVANKDNLKPLVAVLEFKKAKDIEIIKMEQGNKISRILAWRW 303
>gi|85819030|gb|EAQ40189.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 282
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 151/342 (44%), Gaps = 75/342 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP NK + P F L P + + G ID+++ A EL R +LL+D+ L
Sbjct: 1 MHPDNK-NIGPYLFKQLRKANKDLAPHILETNRGIQTIDFSNPKAVLELNRAILLNDYSL 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
NW+ IP+G L P +P R++YI +++D L+++ + +G D+GTGAN IYPLLG
Sbjct: 60 NWYDIPEGYLAPAIPGRADYILYLKDFLNTD---------KQAQGLDVGTGANFIYPLLG 110
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
SL W G D I+ + V N+ ++
Sbjct: 111 GSLFNWKMKGVD----------------------IDPKAVQNA-------------NLLL 135
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
E N + G + + + F G + GEQ+DF +CNPPF+ S
Sbjct: 136 EKNTHLKGFLSAIYQQQRAQIFE----------------GAILPGEQYDFTMCNPPFYSS 179
Query: 255 MEEAGLNPKTSC------------GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
+EA K G E+ C+GGE FI R++++SV K W+T+
Sbjct: 180 EKEAFKATKEKSKNLKLKEVERNFAGQSNELWCNGGEALFIKRMVKESVHFKDQVGWFTT 239
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+V + +L + +L K+ KT + QG LAW F
Sbjct: 240 LVSKSEHLPKIRKQLEKLKAE-HKTVDMSQGNKKSRFLAWRF 280
>gi|401408133|ref|XP_003883515.1| hypothetical protein NCLIV_032700 [Neospora caninum Liverpool]
gi|325117932|emb|CBZ53483.1| hypothetical protein NCLIV_032700 [Neospora caninum Liverpool]
Length = 560
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 142/333 (42%), Gaps = 82/333 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++S D+ L Y + ++ + G +D T A EL + L++ +GL
Sbjct: 178 MHPRNRHSNGTVDYGALGEKYHDLKKYLAPKKHGGFSLDMTSTMALYELAKALMMEFYGL 237
Query: 76 NWWIPDGQ---LCPTVPNRSNYIHWIEDLL------SSNIIPTTSRNGD----------- 115
+ +P L P +P+R+NYIH + DLL + + R+GD
Sbjct: 238 KFELPLSHEHFLVPCIPSRANYIHHMADLLVDVEQEGALHLALHGRDGDSPAVRRAAQEA 297
Query: 116 ------KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELI 169
+K DIG GANC+YPLLG + GW+FVGSD++ +LE A +NV N
Sbjct: 298 QPLRGKHIKVLDIGVGANCVYPLLGCAEYGWTFVGSDISKRSLELARENVNLN------- 350
Query: 170 EIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229
+ H+ + +P
Sbjct: 351 ---------------------------GLGSCVHLRHQQDPVK----------------- 366
Query: 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289
GVV +GE F +CNPPF ES ++ + P E+VC GGE FI +I +
Sbjct: 367 -FFSGVVENGEMFALSMCNPPFHESTDQVNVCPFRVLEAQNHEIVCEGGELNFIMSMIRE 425
Query: 290 SVALKQTFRWYTSMVGRKSNLK----FLISKLR 318
S F W+TS+V R S +K FL +LR
Sbjct: 426 SREFCSQFMWFTSLVARASTVKTVKRFLWEELR 458
>gi|422307500|ref|ZP_16394659.1| hypothetical protein VCCP1035_2068 [Vibrio cholerae CP1035(8)]
gi|408619717|gb|EKK92732.1| hypothetical protein VCCP1035_2068 [Vibrio cholerae CP1035(8)]
Length = 362
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGANERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+++++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAEQVLWFSTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|297579193|ref|ZP_06941121.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536787|gb|EFH75620.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 362
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKAVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGGNERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+++++ + N++ + +L+K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAEQVLWFSTLISKGDNVRGMKKQLKKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|420370824|ref|ZP_14871327.1| ribosomal RNA large subunit methyltransferase F, partial [Shigella
flexneri 1235-66]
gi|391319875|gb|EIQ76820.1| ribosomal RNA large subunit methyltransferase F, partial [Shigella
flexneri 1235-66]
Length = 250
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 137/305 (44%), Gaps = 74/305 (24%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR--------------- 161
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
+ S + FN G++ EQ+D +CN
Sbjct: 162 --------------------QKESGAIFN----------------GIIHKNEQYDATLCN 185
Query: 249 PPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQ 295
PPF +S A GLN + GG +E+ C GGE FI ++IE+S +
Sbjct: 186 PPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVNFIKKMIEESKGFAK 245
Query: 296 TFRWY 300
W+
Sbjct: 246 QVMWF 250
>gi|396487705|ref|XP_003842701.1| similar to DUF890 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312219278|emb|CBX99222.1| similar to DUF890 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 448
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 170/392 (43%), Gaps = 92/392 (23%)
Query: 23 SENPP----DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
++ PP DF LA + P F+ ++ S+ G+ +D+ D + TR+L++ +L + GL
Sbjct: 4 AQRPPYHTVDFKALAKVNPEFKQ-LWQSKSGK--LDFQDPDTTRKLSKAILTTEFGLELD 60
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD---KVKGFDIGTGANCIYPLLG- 134
+P+ +LCP +PNR NY+ WI+ L+ S P+ S + KV G DIGTGA+ IY +L
Sbjct: 61 VPNDRLCPPIPNRWNYVSWIQGLIDSTS-PSYSNKYEPERKVVGLDIGTGASAIYTMLCL 119
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
S W +D+ + A +N+ N S + + + S P I GKS
Sbjct: 120 KSRPNWDMCATDVDKASFTSAARNLALN---SLMTRTTLLQTTSSQPLIPLQALGKST-- 174
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
DF ICNPPFF S
Sbjct: 175 -----------------------------------------------LDFTICNPPFFTS 187
Query: 255 MEEA---------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
E P C G P EMVC GG+ F+TR++E+S+ L++ WY+SM+G
Sbjct: 188 ESEMHNSLTGEGKSWKPNAVCTGAPIEMVCPGGDLGFVTRLVEESLVLREKVSWYSSMLG 247
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF--VPPARKIISPHVAEKKNL 362
+ + K +I+ L++ G+ G T RW +AWSF P I P +L
Sbjct: 248 KLESAKAVITLLKQRGIANWAVGVIDTGASTKRWVVAWSFGDWRPKNSISRPPSLPNSHL 307
Query: 363 SF----------------MLEGVQRQFSALDV 378
F L +Q FSALD+
Sbjct: 308 PFPTTYTIPLPPTSTSETALSTLQTHFSALDL 339
>gi|343516682|ref|ZP_08753714.1| putative SAM-dependent methyltransferase [Vibrio sp. N418]
gi|342795740|gb|EGU31449.1| putative SAM-dependent methyltransferase [Vibrio sp. N418]
Length = 385
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 154/371 (41%), Gaps = 91/371 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N + + DFA L P V + G I + D A + L + LL + +
Sbjct: 61 LHKRNVH-QGRYDFARLVKALPELAKHVVKNPVGEATIRFDDPIAVKLLNKALLAEHYSV 119
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IP+G LCP +P R++YIH + DLLSS N ++ DIG GANCIYP++G
Sbjct: 120 TQWNIPEGYLCPPIPGRADYIHRLADLLSSE---APKLNHKLIRALDIGVGANCIYPIVG 176
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GW VGSD+ V+ VDNS + + L G
Sbjct: 177 ATQYGWHCVGSDVDSVS----------------------VDNSNRIATENDVLVG----- 209
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
N++ D S H G+++ GE +D CNPPF S
Sbjct: 210 --NVECRLQSD-------------------SRH---FFQGIIQPGEYYDVTTCNPPFHSS 245
Query: 255 MEE---------AGLNP------------------KTSC--------GGTPEEMVCSGGE 279
+EE A LN KT+ GG E+ C GGE
Sbjct: 246 LEEAQKGTERKIANLNAHKAKRGNVKAEKATSTPVKTASKQSTTLNFGGQKAELWCPGGE 305
Query: 280 RAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWG 339
+F+ + +S W+T+++ +K N+++L L KV V E QGQ
Sbjct: 306 ASFVKNLAYESEKFATQVLWFTTLISKKDNVRWLCKNLEKVAAKQVTIVEMSQGQKISRF 365
Query: 340 LAWSFVPPARK 350
+AWSF A++
Sbjct: 366 VAWSFKDQAQR 376
>gi|229520637|ref|ZP_04410061.1| hypothetical protein VIF_001163 [Vibrio cholerae TM 11079-80]
gi|229342461|gb|EEO07455.1| hypothetical protein VIF_001163 [Vibrio cholerae TM 11079-80]
Length = 362
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS++GSD+ V+++ A S+
Sbjct: 165 VTEYGWSWIGSDVDSVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGANERYTVTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+++++ + N++ + +L K+G ++ E QGQ +AWSF
Sbjct: 294 SQQFAEQVLWFSTLISKGDNVRGMKKQLEKLGAQSIQVVEMAQGQKISRFVAWSF 348
>gi|262192340|ref|ZP_06050494.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
cholerae CT 5369-93]
gi|262031766|gb|EEY50350.1| putative ribosomal RNA small subunit methyltransferase J [Vibrio
cholerae CT 5369-93]
Length = 362
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 157/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKAMPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGANERYTVTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S Q W+++++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 SQQFAQQVLWFSTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFVAWSF 348
>gi|336264291|ref|XP_003346923.1| hypothetical protein SMAC_09439 [Sordaria macrospora k-hell]
gi|380086997|emb|CCC05509.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 515
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 160/333 (48%), Gaps = 68/333 (20%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
+N Y ++P F L P F PF+ D + ++D+ D +A +LT+ LL D+GL
Sbjct: 86 RNLYIKDP-SFKYLGLKDPDFAPFL----DSKNQLDFNDPSAVMQLTKTLLKIDYGLQIE 140
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSS-----NIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+P +LCP VPNR NYI W+ LLSS + +S + ++ G DIGTGA+ IYPLL
Sbjct: 141 LPPDRLCPPVPNRHNYILWLSSLLSSSTYHPDQTHPSSGSQRRLIGLDIGTGASAIYPLL 200
Query: 134 GASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
G + WSF+ +D+ +L +A++NV+ N + + + P +LT + +
Sbjct: 201 GCTQHANWSFIATDIDAHSLSYAQRNVQLNNLPDRITLLLHTPDQPLIPFDSPTLTARGI 260
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
E+ DF
Sbjct: 261 -----------------------------------------------ERVDF-------- 265
Query: 253 ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKF 312
+M + P T+C G EMVC GGE I R+I++S+ L++ WYTSMVG+ ++L+
Sbjct: 266 -TMSKKSRPPLTACTGAEVEMVCDGGEVKHIFRMIDESLVLREKVGWYTSMVGKVTSLET 324
Query: 313 LISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
++ +LR+ + TE VQG +T RW + WSF
Sbjct: 325 VVERLRREKIDNYAVTELVQGNKTKRWAVGWSF 357
>gi|392307440|ref|ZP_10269974.1| 23S rRNA mA1618 methyltransferase [Pseudoalteromonas citrea NCIMB
1889]
Length = 305
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 155/352 (44%), Gaps = 73/352 (20%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
R +H +NK+ + F L S P+ + + G ID+T+ A + L + LL H
Sbjct: 8 RTFMHSRNKHKQGY-HFESLVSALPALSKYTTVTPRGDTSIDFTNKAAVKALNKALLKHH 66
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + W I D LCP VP R++YIH I DLL+ N + +N +KG DIGTGAN IYP
Sbjct: 67 YNIEHWDIADEFLCPPVPGRADYIHGIADLLA-NDMDIKHKN---IKGLDIGTGANVIYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LLG S W F+GSD I ++ V ++++
Sbjct: 123 LLGCSEYNWHFIGSD----------------------INLKAVKSAQTI----------- 149
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
S++ N+ Q++ H + ++ + F +CNPPF
Sbjct: 150 -------------------CSANKLNVEVRHQTNPHF--IFENILSSADVLSFSMCNPPF 188
Query: 252 FESMEEAGLN------------PKT-SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
S + A PK+ + GG E+ C GGE FI +I +S Q
Sbjct: 189 HSSEQAAQTGTARKWKNLKKAPPKSLNFGGHAPELWCEGGELRFIKTMIRESKLYSQQCG 248
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
W+TS+V K NL+ L L+ V +K + QGQ LAWSF+ A++
Sbjct: 249 WFTSLVSNKDNLQPLKKALKTVQPIEIKVIKMAQGQKQSRFLAWSFMTQAQR 300
>gi|358386755|gb|EHK24350.1| hypothetical protein TRIVIDRAFT_29905 [Trichoderma virens Gv29-8]
Length = 432
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 132/270 (48%), Gaps = 55/270 (20%)
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRN--GDKVKGFDIGTGANCIYPLLGASLLGWSFVG 144
V NR NYI W++DLL TTS + G KV G DIGTGA+CIYPLLG + WSFV
Sbjct: 64 AVANRHNYILWLKDLLD-----TTSYDEPGRKVVGLDIGTGASCIYPLLGCAQRPWSFVA 118
Query: 145 SDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHM 204
+D+ D +LEWA+KNVK N + I + + P ++ MD
Sbjct: 119 TDIDDKSLEWAKKNVKLNDLDGRIQLIGRKPDDALIP-----------LEDLKMD----- 162
Query: 205 DEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKT 264
S F + PP F +S +E P T
Sbjct: 163 --------SIDFTMT--------NPP-------------FYESEEAMVKSAQEKSRPPFT 193
Query: 265 SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324
+C G EMV GGE FI RI E+S+ L++ +WYT+MVG S+L ++ KLR+ +
Sbjct: 194 ACTGAKVEMVTQGGEVGFINRIFEESLVLRERVQWYTAMVGFLSSLTRIVDKLREHKIDN 253
Query: 325 VKTTEFVQG-QTCRWGLAWSFVP--PARKI 351
TEF QG +T RW +AWSF P PA+ +
Sbjct: 254 YAITEFHQGNKTRRWAIAWSFRPLRPAQSV 283
>gi|340522130|gb|EGR52363.1| predicted protein [Trichoderma reesei QM6a]
Length = 398
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 149/338 (44%), Gaps = 85/338 (25%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
+N Y++ PDF +A L P F VF S GR +FN +
Sbjct: 7 RNLYTK-APDFKAMAHLDPEFAA-VFNSVKGRD----LNFNDPK---------------- 44
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN--GDKVKGFDIGTGANCIYPLLGAS 136
+V NR NYI W++DLL TTS + G K G DIGTGA+CIYPLLG
Sbjct: 45 --------SVANRHNYILWLKDLLD-----TTSYDEPGGKAVGLDIGTGASCIYPLLGCV 91
Query: 137 LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196
WSF+ +D+ D +LEWA KN+K N S + I + + P
Sbjct: 92 QRPWSFIATDIDDKSLEWARKNIKLNDLESRIQVISRKPDDALIP--------------- 136
Query: 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESME 256
E S + + PP F +S +
Sbjct: 137 -----------LEDIKVDSLDF------TMTNPP-------------FYESEEAMVKSAQ 166
Query: 257 EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISK 316
E P T+C G EMV GGE FI RI ++S+ L++ RWYT+MVG S+L LI K
Sbjct: 167 EKSRPPFTACTGAKVEMVTQGGEVGFIERIFQESLVLRERVRWYTAMVGFLSSLTRLIDK 226
Query: 317 LRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PARKI 351
LR+ + TEF QG +T RW + WSF P PA+ +
Sbjct: 227 LREHKIDNYAVTEFQQGNKTRRWAIGWSFGPLRPAQHV 264
>gi|149277013|ref|ZP_01883155.1| hypothetical SAM-dependent methyltransferase [Pedobacter sp. BAL39]
gi|149231890|gb|EDM37267.1| hypothetical SAM-dependent methyltransferase [Pedobacter sp. BAL39]
Length = 316
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 165/338 (48%), Gaps = 41/338 (12%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +HP+N++ DF L P+ + FV ++ G +D+ D A + L + LL +
Sbjct: 4 EKQILHPRNQHRSRY-DFPELIRSLPALKDFVRENQYGDLSVDFADPAAVKSLNKALLKY 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ ++ W IP G LCP +P R++YIH+I DLL+ R G +KG D+G GANCIY
Sbjct: 63 FYQIDHWDIPAGYLCPPIPGRADYIHYIADLLADANGGDLPR-GKNIKGLDVGIGANCIY 121
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
P++G GW F GS++ VA++ A NP + + IR+ +S I + +
Sbjct: 122 PIIGHQEYGWEFTGSEIDPVAVKAAANIAAVNPALKAAVVIRQ---QQSKGQIFKGI--- 175
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD-GEQFDFCICNP 249
+ E D + P +S+ AG Q VR+ G+Q
Sbjct: 176 -IHKEEYFDFT----MCNPPFHASAQEALAGTQRK----------VRNLGKQ-------- 212
Query: 250 PFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN 309
G +P + GG E+ GGE FI R+IE+S + ++++V + +N
Sbjct: 213 --------KGPSPVLNFGGKNAELWVEGGEVGFIRRMIEESALFGKQCFCFSTLVSKSAN 264
Query: 310 LKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347
L F+ + L +VGV V+T E QGQ +AW+F+ P
Sbjct: 265 LSFIYAALERVGVQTVRTVEMAQGQKVSRFVAWTFLTP 302
>gi|88802722|ref|ZP_01118249.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Polaribacter irgensii 23-P]
gi|88781580|gb|EAR12758.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Polaribacter irgensii 23-P]
Length = 284
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 152/345 (44%), Gaps = 74/345 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL- 70
+ +HPKNK++ +F L + + FV ++ ID+++ A +EL + LL
Sbjct: 2 KEKNLHPKNKFNTGY-NFDALIKINSKLKTFVSKNQFDVITIDFSNPEAVKELNKALLFS 60
Query: 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+D W P LCP +P R +Y+H++ DL+S T +N VK DIGTGA CIY
Sbjct: 61 YDKVTTWDFPKENLCPPIPGRLDYVHYLSDLIS------TEKN---VKILDIGTGATCIY 111
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PLLG + WSFV SD+ +L+ A+ + N ++S IE+RK N
Sbjct: 112 PLLGVAEYDWSFVASDIDFASLDTAQDIIDDN-NLSAKIELRKQANESQ----------- 159
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+L G++++ + F +CNPP
Sbjct: 160 ----------------------------------------ILKGIIKEEDSFSAVMCNPP 179
Query: 251 FFESMEEA-----------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
FF+S EEA G N + G E+ GGE+AF+ + +S K+ +W
Sbjct: 180 FFKSAEEAQGANKRKNKNLGNNTVRNFSGNNNELWYIGGEKAFLHNYLYESSLYKEKSKW 239
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+TS+V +K N++ L K+G K QG W F
Sbjct: 240 FTSLVSKKENIESLQKSSAKLGALEFKVIPMTQGNKVTRIACWRF 284
>gi|32564933|ref|NP_871660.1| Protein METT-10, isoform b [Caenorhabditis elegans]
gi|24817626|emb|CAD54175.1| Protein METT-10, isoform b [Caenorhabditis elegans]
Length = 464
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 151/352 (42%), Gaps = 93/352 (26%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y PPDF LA YP F F Y +G+ D+ A R LT+ LL D L
Sbjct: 7 MHPRNPYRNKPPDFKALAVEYPEFRKFCQYVSNGKVTFDFKKDAAVRCLTQTLLKKDFNL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP G L P VP + NY I+DLL +N + ++N ++GA
Sbjct: 67 DVEIPPGHLVPRVPQKLNYCLLIDDLLKANKL---TKN------------------VIGA 105
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
W F+ +D + ++ A +NV N S + + P ++ L
Sbjct: 106 RQFNWKFIATDGDEKSVRVAHENVAKNGLSSSICVV------HVNPDVKTVL-------- 151
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES- 254
MD +V + D + + FC+CNPPFFE
Sbjct: 152 --MD--------------------------------VVNTIPDTD-YAFCMCNPPFFEKG 176
Query: 255 ---------------------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
E P ++ + E+ GGE AF+ RII+DSV L
Sbjct: 177 NGDDKFCEDISSSTETYSNRVASEFRTAPHSATFASSAELFVDGGEVAFVNRIIDDSVLL 236
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTI-VKTTEFVQGQTCRWGLAWSF 344
+ + YT+M+GRKS+LK L ++L++ G + + + QG+T RW LAW+F
Sbjct: 237 RDRIKIYTTMIGRKSSLKPLQNRLQRFGDDVKIMISVLNQGKTKRWMLAWTF 288
>gi|254286333|ref|ZP_04961291.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|421351351|ref|ZP_15801716.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE-25]
gi|150423500|gb|EDN15443.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|395951796|gb|EJH62410.1| ribosomal RNA large subunit methyltransferase F [Vibrio cholerae
HE-25]
Length = 362
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 159/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGANERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+++++ + N++ + +L K+G ++ + QGQ +AWSF
Sbjct: 294 SQQFAEQVLWFSTLISKGDNVRGMKKQLEKLGTQSIQVVDMAQGQKISRFVAWSF 348
>gi|153824823|ref|ZP_01977490.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149741541|gb|EDM55571.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 362
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 158/355 (44%), Gaps = 81/355 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A S+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQA-----------------------------------SLIV 189
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+SN + GH++ + +S FN G++ E++ CNPPF S
Sbjct: 190 QSNSKLQGHIECRLQKNSQHIFN----------------GIIGANERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S + W+++++ + N++ + +L K+G + E QGQ +AWSF
Sbjct: 294 SQLFAEQVLWFSTLISKGDNVRGMKKQLEKLGAQSIHVIEMAQGQKISRFVAWSF 348
>gi|336316052|ref|ZP_08570955.1| Putative SAM-dependent methyltransferase [Rheinheimera sp. A13L]
gi|335879651|gb|EGM77547.1| Putative SAM-dependent methyltransferase [Rheinheimera sp. A13L]
Length = 309
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 154/351 (43%), Gaps = 74/351 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+NK+ + DF +L++ P+ FV + G ID+ + A + L + LL H + +
Sbjct: 8 LHPRNKH-QQAYDFEVLSAAVPALTAFVRDNGYGTVSIDFANPQAVKTLNQALLKHFYAI 66
Query: 76 -NWWIPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+W +P+ LCP VP R +Y+H++ DLL+ IPT G K++ D G GAN IYP
Sbjct: 67 PHWQLPEQFLCPAVPGRVDYLHYLADLLAPLNKGKIPT----GSKLQLLDTGCGANLIYP 122
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
LL + GW S++ AL A + N + I +R+ SE
Sbjct: 123 LLAQAEYGWKVTASELDPEALAAAVLLIDQN-QLHHKIALRQQHKSEL------------ 169
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ G+++ + FD +CNPPF
Sbjct: 170 ---------------------------------------IFQGIIQPDDLFDLTLCNPPF 190
Query: 252 FESMEEAGL------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
S E+A N + + G E+ C GGE AFI R+I +S + Q W
Sbjct: 191 HSSAEQAQAGSERKAKNLGQKNTRLNFAGRNHELWCEGGEAAFIRRMINESQSYGQQVLW 250
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARK 350
++S+V ++ NL L +L +G + E QG L WSF+ P ++
Sbjct: 251 FSSLVSKQENLPILQRQLTTLGAQ-QQLIEMQQGNKQSRLLVWSFMQPTQR 300
>gi|449275811|gb|EMC84579.1| Putative methyltransferase METT10D, partial [Columba livia]
Length = 450
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 136/262 (51%), Gaps = 73/262 (27%)
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
GTGA+CIYPLLGA+L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV
Sbjct: 1 GTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP------- 52
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
Q++L ++++ES + +
Sbjct: 53 -QKTLLMDALKEESEI------------------------------------------VY 69
Query: 243 DFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
DFC+CNPPFF + EA G+N P + G E++ GGE F+ RII DS+ L
Sbjct: 70 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 129
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV-------P 346
K+ RWY+ M+G+K +L L +LR GV V TEF QG+T RW LAWSF P
Sbjct: 130 KKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTHTEFCQGRTMRWALAWSFYDDVQVPSP 189
Query: 347 PA--RKIISPHVAEKKNLSFML 366
P+ RK+ P +K ++FM+
Sbjct: 190 PSKRRKLEKP----RKPITFMV 207
>gi|157377559|ref|YP_001476159.1| SAM-dependent methyltransferase [Shewanella sediminis HAW-EB3]
gi|205829612|sp|A8G1Q8.1|RLMF_SHESH RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|157319933|gb|ABV39031.1| protein of unknown function DUF890 [Shewanella sediminis HAW-EB3]
Length = 404
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 161/405 (39%), Gaps = 116/405 (28%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ +H +N + + DF L P+ +P+V + G ID+ D A + L LL
Sbjct: 46 EKKGLHERNLHRDGY-DFEQLIEASPALKPYVRPNPYGNLSIDFADPLAVKALNLALLQL 104
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS--------------------NIIPTT 110
+ + +W IP G LCP +P R +Y+H+I DLL+ +P
Sbjct: 105 HYRIEYWDIPAGFLCPPIPGRVDYLHYIADLLAGIDSDTVGDKAEEQVEEIGTRQNVPYA 164
Query: 111 SR-------------NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157
S+ K+ DIGTGAN IYP+LG GW FV SD+ +++E +
Sbjct: 165 SKPESSAPKQRYKSQKRMKINALDIGTGANGIYPILGIQAYGWRFVASDVDPLSIENVNR 224
Query: 158 NVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFN 217
V N + ++ R
Sbjct: 225 IVGQNKALQGKLKTR--------------------------------------------- 239
Query: 218 LPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA------------------G 259
L Q +HG +++ ++FD +CNPPF S+ EA G
Sbjct: 240 LQTDHQKVFHG------IIQADDRFDITLCNPPFHASLSEASEGSLRKVKNLAANRAAKG 293
Query: 260 LNPKTSC------------GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
P+ + GG E+ C GGE+ F+ +I +S W+TS+V +K
Sbjct: 294 HKPEPAASKAKPDANELNFGGQKAELWCEGGEKQFLANMIRESKDFATQCLWFTSLVSKK 353
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII 352
NL+ + L KVG VKT + QG LAWS++ P ++ +
Sbjct: 354 ENLQPCYAALEKVGAVTVKTIDMAQGNKLTRVLAWSYLTPKQQAL 398
>gi|327405960|ref|YP_004346798.1| 23S rRNA m(6)A-1618 methyltransferase [Fluviicola taffensis DSM
16823]
gi|327321468|gb|AEA45960.1| 23S rRNA m(6)A-1618 methyltransferase [Fluviicola taffensis DSM
16823]
Length = 325
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 163/358 (45%), Gaps = 69/358 (19%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
K + +R +H +NK E AL+ S P + +V ++ G ID++ A +
Sbjct: 8 KLQAEKRSSVERLHIRNKNRERYDLTALIHST-PELKSYVKPNKFGDDSIDFSSPAAVKL 66
Query: 64 LTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L + LL + +G+ NW PD LCP +P R++YIH + DLL+ N P G+++ D+
Sbjct: 67 LNKALLNYYYGIRNWEFPDENLCPPIPGRADYIHHMADLLAENN-PNGIPQGNQITCLDV 125
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GA CIYP+LG + WSF+GSD+ K+V S+ H+ E+ S
Sbjct: 126 GVGATCIYPILGVTEYDWSFIGSDID-------PKSVASSRHV-----------VEANSS 167
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
++ +T + + P + + G++ + E+F
Sbjct: 168 LRNKITCRL---------------QTRPKA------------------IFSGIIGNEEKF 194
Query: 243 DFCICNPPFFESMEEAGLN---------------PKTSCGGTPEEMVCSGGERAFITRII 287
D ICNPPF S+++A P+ + G E++C GGE F+ +I
Sbjct: 195 DLTICNPPFHSSLDDAQNGTRRKIKNLSGKQLKMPELNFSGNSNELICEGGEFQFLMNMI 254
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
++S + W++S+V ++SNLK + L K +KT G + W+F+
Sbjct: 255 QESKKFSKNCYWFSSLVSKESNLKGIYQSLDKNQAVQIKTIPMGTGNKRSRIVCWTFL 312
>gi|338998713|ref|ZP_08637382.1| 23S rRNA mA1618 methyltransferase [Halomonas sp. TD01]
gi|338764398|gb|EGP19361.1| 23S rRNA mA1618 methyltransferase [Halomonas sp. TD01]
Length = 266
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 141/319 (44%), Gaps = 81/319 (25%)
Query: 49 GRPRIDWTDFNATRELTRVLL-LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNII 107
G ID+ D A + L LL H + ++W IP+G LCP +P R++YIH+I DLL
Sbjct: 7 GDLSIDFADPLAVKTLNAALLNRHYNIVDWDIPEGALCPPIPGRADYIHYIADLLG---- 62
Query: 108 PTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE 167
R +K DIGTGAN IYPLL + GW VGSD+ +LE + +NP + E
Sbjct: 63 ----REQRSIKLLDIGTGANGIYPLLACQIYGWQCVGSDINPQSLENVATIIANNPTLKE 118
Query: 168 LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYH 227
+R +Q + N H+ E
Sbjct: 119 RFTLR-------------------MQHDKN-----HIFE--------------------- 133
Query: 228 GPPVLVGVVRDGEQFDFCICNPPFFESMEEA------GLN---------------PKTSC 266
G+++ GE FD +CNPPF S++EA LN P +
Sbjct: 134 ------GIIQAGEFFDVSVCNPPFHASLDEALKGSQLKLNNLARSRGEQQPKNQSPTLNF 187
Query: 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326
GG E+ C GGE+ F+ ++I +S RW+TS+V + N+K + K+G V+
Sbjct: 188 GGLGAELWCKGGEQLFLKKLIRESKVYSTQCRWFTSLVSKTDNVKPAKKLIHKLGAVDVR 247
Query: 327 TTEFVQGQTCRWGLAWSFV 345
E QG L+W+F+
Sbjct: 248 EIEMKQGNKITRVLSWTFI 266
>gi|449300380|gb|EMC96392.1| hypothetical protein BAUCODRAFT_70727 [Baudoinia compniacensis UAMH
10762]
Length = 446
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 160/334 (47%), Gaps = 64/334 (19%)
Query: 22 YSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPD 81
Y + DF LA+ F S+D R ID+ D ++LT+ LL D L+ +P+
Sbjct: 15 YYDGDVDFDALAAEDADFAAICKVSKDKR-WIDFQDPKVVQQLTKSLLKCDFALSLELPN 73
Query: 82 GQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD---------KVKGFDIGTGANCIYPL 132
+LCP VP R NY+ WI++LL TTS GD +V G DIG GA+CIYPL
Sbjct: 74 DRLCPPVPVRWNYVRWIQELLD-----TTS--GDYRDHYDPEREVLGLDIGVGASCIYPL 126
Query: 133 LGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L S+ W G+D+ + ++A KNV++N +++ I++R S + +
Sbjct: 127 LACSMRPEWRMAGTDVDQHSFDYARKNVEAN-GLAKRIKLRL------------STSDRP 173
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+ +M + G P +S + + PP V
Sbjct: 174 LIPLDSMKIEGLDFVMTNPPFYTSHTDMLASYAGKQAPPSAV------------------ 215
Query: 252 FESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
C G EM+C GG+ F+TRI+++S+ L++ +WY++M+G+ S+L+
Sbjct: 216 --------------CTGADNEMICPGGDVGFVTRILDESLKLRERVQWYSAMLGKMSSLQ 261
Query: 312 FLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
LI+KLR+ +T T G +T RW +AWSF
Sbjct: 262 QLIAKLREHNITNFAVTCLQAGYRTKRWAVAWSF 295
>gi|293397053|ref|ZP_06641327.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291420524|gb|EFE93779.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 320
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 70/323 (21%)
Query: 4 KKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRE 63
+K++ +++ +HP+N++ DF L + P+ PFV + G +D+ D A +
Sbjct: 13 QKKKTFPQQKKGLHPRNRHRSRY-DFPALIASCPALAPFVKANEWGDESVDFADPAAVKM 71
Query: 64 LTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
L R LL H +G+ W IP LCP +P R++Y+H + DLL+++ R G V D+
Sbjct: 72 LNRALLQHFYGIEHWDIPADYLCPPIPGRADYLHHLADLLATSNGGEIPR-GKSVAILDV 130
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
G GANCIYP++G GW F GS++ V+L A+ V NP + + +R
Sbjct: 131 GVGANCIYPIVGLREYGWRFTGSEIDPVSLNSAKMIVAMNPTLKNSVRLR---------- 180
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
+Q + G ++GV E+F
Sbjct: 181 ---------LQKQPTRIFDG-----------------------------IIGVA---ERF 199
Query: 243 DFCICNPPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRI 286
D +CNPPF S +EA P + GG E+ C GGE AF+ +
Sbjct: 200 DATLCNPPFHASEQEARASTRLKLHKLGKGNVADKPVQNFGGKNNELWCDGGEEAFVRSM 259
Query: 287 IEDSVALKQTFRWYTSMVGRKSN 309
+E+SVA + W+TS++ +K +
Sbjct: 260 VEESVAKAKNCLWFTSLISKKHH 282
>gi|291245178|ref|XP_002742468.1| PREDICTED: methyltransferase 10 domain containing-like, partial
[Saccoglossus kowalevskii]
Length = 236
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 133/291 (45%), Gaps = 68/291 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N+Y PPDFA LA+ Y +F V S G+ +D+ + A R LT LL D +
Sbjct: 1 MHPRNRYKNQPPDFAKLAAKYDNFAQHVSVSLSGKVSVDFKNPQALRSLTCTLLKEDFNV 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P +L PT+P R NYIHW+EDL+ N + G + G DIGTGA+CIYPLLGA
Sbjct: 61 EIDVPLDRLVPTLPLRLNYIHWVEDLIRDN----GAYRGSHIHGIDIGTGASCIYPLLGA 116
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
L W ++ V + +A++N++ N
Sbjct: 117 RLNEWHITATETDPVNVFYAKENIEKN--------------------------------- 143
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ--FDFCICNPPFFE 253
NM+ + E +E + V D E+ +DF +CNPPF+
Sbjct: 144 -NMNDKIKVIESSEDD-------------------IFSQVFEDNERQCYDFSMCNPPFYG 183
Query: 254 SMEEA-GL--------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
S+ EA G PK+S E V GGE F+ +II DS+ ++
Sbjct: 184 SLLEAQGFFSRSEKRPEPKSSSTAAEPECVVEGGEVEFVRKIILDSLKFRE 234
>gi|380694586|ref|ZP_09859445.1| 23S rRNA mA1618 methyltransferase [Bacteroides faecis MAJ27]
Length = 275
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 139/319 (43%), Gaps = 75/319 (23%)
Query: 49 GRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNII 107
G+ I++ + A + L + LL+ +G+ +W IP LCP +P R++YIH+I DL+ +
Sbjct: 7 GKQTINFFNPQAVKALNKALLVTHYGIRYWDIPKNYLCPPIPGRADYIHYIADLIDPEGV 66
Query: 108 PTTSRN------GDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161
+ + + DIG GANCIYP++G GW+FVGSD+ +++E A K V
Sbjct: 67 NMMVKEECDDQPRRQCRCLDIGVGANCIYPIIGHVEYGWTFVGSDIDPLSIENARKIVTC 126
Query: 162 NPHISELIEIR-KVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPA 220
NP ++ I++R + DN +
Sbjct: 127 NPVLAHKIDLRLQKDNRK------------------------------------------ 144
Query: 221 GAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAG---------------LNPKTS 265
+ G++ E FD ICNPPF S EEA K +
Sbjct: 145 ----------IFDGIIAPDEYFDVTICNPPFHSSREEAEDGTLRKLSSLKGETVKKAKLN 194
Query: 266 CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIV 325
GG E+ C GGE F+ +I +S + W+TS+V ++ NL L +KL+ V +
Sbjct: 195 FGGNANELWCEGGELRFLLNMISESQKYRVNCGWFTSLVSKEKNLDKLYAKLKAVHASEY 254
Query: 326 KTTEFVQGQTCRWGLAWSF 344
K QG LAW F
Sbjct: 255 KIIRMYQGTKSSRILAWRF 273
>gi|297538210|ref|YP_003673979.1| rRNA (adenine-N(6)-)-methyltransferase [Methylotenera versatilis
301]
gi|297257557|gb|ADI29402.1| rRNA (adenine-N(6)-)-methyltransferase [Methylotenera versatilis
301]
Length = 314
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 161/332 (48%), Gaps = 40/332 (12%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+NK+ DF L + FV + G ID+++ A + L + LL +G+
Sbjct: 11 LHPRNKH-RGRYDFDQLIQANAALAQFVKLNEYGEASIDFSNAQAVKALNQALLKQFYGV 69
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IP LCP +P R++Y+H + DLLS+ T + G+ ++G DIG GAN IYPL+G
Sbjct: 70 AVWDIPKQYLCPPIPGRADYLHCMADLLSATNAGVTPQ-GESIRGLDIGIGANAIYPLIG 128
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
GW+FVG+D+ AL+ A+ + +N +S +IE+R ++ P+ G Q
Sbjct: 129 NHEYGWNFVGADIDSNALKNAQHILDAN-MLSNMIELR----LQTLPNC--IFKGVIKQG 181
Query: 195 ES-NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
E+ + M P +S + AG + + G +G + Q
Sbjct: 182 EAFDFTMCN------PPFHASLADAQAGTERKWRG----LGKTKKHAQ------------ 219
Query: 254 SMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
+ + GG E+ C GGE AF+T +I +S W+++++ + +NL +
Sbjct: 220 -------STVLNFGGQTTELYCEGGEEAFVTTMINESNQYATQCLWFSTLISKATNLPSV 272
Query: 314 ISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
L+KV VKT + QGQ +AW+F+
Sbjct: 273 YRALKKVNALEVKTIDMTQGQKQSRIVAWTFL 304
>gi|359395365|ref|ZP_09188417.1| Ribosomal RNA large subunit methyltransferase F [Halomonas
boliviensis LC1]
gi|357969630|gb|EHJ92077.1| Ribosomal RNA large subunit methyltransferase F [Halomonas
boliviensis LC1]
Length = 268
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 139/318 (43%), Gaps = 79/318 (24%)
Query: 49 GRPRIDWTDFNATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNII 107
G ID+ D A + L LL + + W IP+G LCP +P R++YIH+I DL
Sbjct: 7 GELSIDFADPLAVKTLNAALLNRYYNIVGWDIPEGALCPPIPGRADYIHYIADLFE---- 62
Query: 108 PTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE 167
++K DIGTGAN IYPLL + GW VGSD+ +LE + +NP + +
Sbjct: 63 --LEHEQPRIKLLDIGTGANGIYPLLACQIYGWECVGSDINTQSLENVATIIANNPTLKD 120
Query: 168 LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYH 227
+R Q + N HM E
Sbjct: 121 RFTLR-------------------TQHDKN-----HMFE--------------------- 135
Query: 228 GPPVLVGVVRDGEQFDFCICNPPFFESMEEA------GLN---------------PKTSC 266
G+++ GE FD +CNPPF S++EA LN P +
Sbjct: 136 ------GIIQPGEFFDVSVCNPPFHASLDEALKGSQLKLNNLARSRGKQKATTQSPTLNF 189
Query: 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326
GG E+ C GGE+ F+ ++I++S RW++S+V + N+K + +RK+G ++
Sbjct: 190 GGLGAELWCKGGEQLFLKKLIKESQVYSTQCRWFSSLVSKSDNVKPAMKLMRKLGAVDIR 249
Query: 327 TTEFVQGQTCRWGLAWSF 344
+ QG LAW+F
Sbjct: 250 EIDMKQGNKMTRVLAWTF 267
>gi|88857082|ref|ZP_01131725.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Pseudoalteromonas tunicata D2]
gi|88820279|gb|EAR30091.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Pseudoalteromonas tunicata D2]
Length = 311
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 155/338 (45%), Gaps = 54/338 (15%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +HP+N ++ N DF L FV + + ID++D A + L + LL+H
Sbjct: 8 KANLHPRNLHN-NGYDFPALVQTLGPLSAFVSKNPHQQDTIDFSDPQAVKMLNKALLMHH 66
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANC 128
+G+ +W IP+ LCP +P R +Y+H++ DLL+ + IIPT G KV DIGTGAN
Sbjct: 67 YGIEFWDIPETYLCPPIPGRVDYLHYLADLLALDNNGIIPT----GKKVSVLDIGTGANL 122
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
+YPL G S GW F+GSD+ V+L+ A++ + N +L + +N
Sbjct: 123 VYPLTGQSEYGWQFIGSDIDPVSLKVAKQISQFNKLPIKLRAQKSANN-----------I 171
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV--LVGVVRDGEQFDFCI 246
SV +E ++ F L +H PV L G R +
Sbjct: 172 FHSVINEKDL-----------------FCLTL-CNPPFHSSPVQALQGTQRKWQNLGHTA 213
Query: 247 CNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR 306
N + GG E+ C GGE AFI ++ +S + W++S+V +
Sbjct: 214 KN--------------NLNFGGQNAELWCEGGELAFIKTMMSESADYQDQVVWFSSLVSK 259
Query: 307 KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
K ++ L L + V VK E QGQ +AWS+
Sbjct: 260 KEHVAPLQKHLARYPVAEVKVVEMAQGQKVSRFIAWSY 297
>gi|71282337|ref|YP_268988.1| SAM-dependent methyltransferase [Colwellia psychrerythraea 34H]
gi|123632619|sp|Q482M9.1|RLMF_COLP3 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|71148077|gb|AAZ28550.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 301
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 159/350 (45%), Gaps = 74/350 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSR-DGRPRIDWTDFNATRELTRVLLLHDHG 74
+H KN++++ +F L +P F+ ++ + + ID+ + A + L LL ++
Sbjct: 1 MHKKNRHNQGY-NFTALVKAHPGLLQFIIKNQYNNQDTIDFANPQAVKALNLSLLKSEYH 59
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ +W IPDG LCP +P R +YIH ++DLL++ T N + DIGTGA+CIYP+L
Sbjct: 60 VKFWDIPDGYLCPAIPGRVDYIHHLQDLLAATP-KTLLPNKTPINVLDIGTGASCIYPIL 118
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
G W FV SD+ ++++ A+ + S+ ++ I R
Sbjct: 119 GQREYDWHFVASDVDPISIKVAKHIISSDKSLNRNINCR--------------------- 157
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253
+P+S+ FN G++ + E + ICNPPF
Sbjct: 158 --------------LQPNSNQIFN----------------GIIAEDEFYHLTICNPPFHS 187
Query: 254 SMEEA---------GLNPKTSC----------GGTPEEMVCSGGERAFITRIIEDSVALK 294
S+ EA LN GG E+ C GGE AFI ++I++S A +
Sbjct: 188 SLAEASKGTARKIKNLNKGNHSSKNQDKTLNFGGQKAELWCPGGELAFIGKMIKESKAYQ 247
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ W+T +V +K +L L L+K +K + QGQ +AWSF
Sbjct: 248 KQVLWFTCLVSKKDHLSKLKLSLKKSDAKQIKVIDMAQGQKISRFIAWSF 297
>gi|392550540|ref|ZP_10297677.1| 23S rRNA mA1618 methyltransferase [Pseudoalteromonas spongiae
UST010723-006]
Length = 295
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 150/344 (43%), Gaps = 75/344 (21%)
Query: 17 HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLN 76
HP+N + N D A LA P+ P++ + G ID++D A + L + LL+ D+ L
Sbjct: 6 HPRNIHL-NGYDLAKLAKFSPTLTPYLIKNEFGNTTIDFSDSKAVKALNQALLVVDYQLL 64
Query: 77 WW-IPDGQLCPTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIYPL 132
W IP+ LCP VP R++ IH + DLL+ + +PT G + DIGTGA+ IYP+
Sbjct: 65 VWDIPETNLCPAVPGRADLIHTLADLLAEQNNGDVPT----GKNTQLLDIGTGASLIYPI 120
Query: 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L + GW V +D+ + +++ A+ + N +L + + DN
Sbjct: 121 LANKIYGWKAVATDIDENSIKQAKNLAQFNKLPVKLRQQKSTDN---------------- 164
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+HG V+ + FD CNPPF
Sbjct: 165 --------------------------------IFHG------VINANDFFDITCCNPPFH 186
Query: 253 ESMEEA------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
S++ A N + G E+ C GGE AF+T +I +SV ++ W+
Sbjct: 187 SSLDHAEKANQRKWKNLSHENKGFNFSGQKAELWCEGGEIAFLTTMISESVDYQEQVGWF 246
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
TS+V +K NL L S+L + + VK GQ L W F
Sbjct: 247 TSLVSKKENLPKLKSQLTRFANSEVKVMPLAHGQKVMHVLCWRF 290
>gi|326912827|ref|XP_003202747.1| PREDICTED: putative methyltransferase METT10D-like [Meleagris
gallopavo]
Length = 471
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 123/233 (52%), Gaps = 60/233 (25%)
Query: 121 DIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSEST 180
+ GTGA+CIYPLLG++L GW F+ +++ D+ +A+KNV+ N ++S+LI++ KV
Sbjct: 21 EAGTGASCIYPLLGSTLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVP----- 74
Query: 181 PSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGE 240
Q++L ++++ES +
Sbjct: 75 ---QKTLLMDALKEESEII----------------------------------------- 90
Query: 241 QFDFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
+DFC+CNPPFF + EA G+N P + G E++ GGE F+ RII DS+
Sbjct: 91 -YDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSL 149
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
LK+ RWY+ M+G+K +L L +L+ GV V TEF QG+T RW LAWSF
Sbjct: 150 QLKKRLRWYSCMLGKKCSLAPLKEELKIQGVPKVTHTEFCQGRTMRWALAWSF 202
>gi|302891585|ref|XP_003044674.1| hypothetical protein NECHADRAFT_44289 [Nectria haematococca mpVI
77-13-4]
gi|256725599|gb|EEU38961.1| hypothetical protein NECHADRAFT_44289 [Nectria haematococca mpVI
77-13-4]
Length = 452
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 139/286 (48%), Gaps = 67/286 (23%)
Query: 67 VLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGA 126
LL + H +++ D C V NR NY+ W++ LL S + + GDK+ G DIGTGA
Sbjct: 69 ALLWNKHKTDFF--DNPQC--VTNRHNYVLWLKGLLDST---SYEKPGDKLVGLDIGTGA 121
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
+CIYPLLG + W F+ +++ +LE+A K N +++L KV + T +I
Sbjct: 122 SCIYPLLGCAQRPWEFIATEIDTKSLEYARK----NVALNKLEHRIKVVERKPTDAI--- 174
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
D+ N+D + DF +
Sbjct: 175 ----IPLDDLNVD-----------------------------------------KIDFTM 189
Query: 247 CNPPFFES-------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
NPPF++S E+ P T+C G EMV GGE AF+ I+ +S+ L++ RW
Sbjct: 190 TNPPFYKSEQEMIKSAEQKSRPPFTACTGAKVEMVTEGGEVAFVDHILNESLKLRERVRW 249
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
YT+M G ++L I+KLR+ G+ TEFVQG +T RW +AWSF
Sbjct: 250 YTAMFGFLTSLSDFIAKLREHGIDNYAVTEFVQGSKTRRWAIAWSF 295
>gi|93004839|ref|YP_579276.1| putative SAM-dependent methyltransferase [Psychrobacter
cryohalolentis K5]
gi|92392517|gb|ABE73792.1| 23S rRNA m(6)A-1618 methyltransferase [Psychrobacter cryohalolentis
K5]
Length = 362
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 158/368 (42%), Gaps = 95/368 (25%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DF +L P + G I+++D A R L + LL + +G+
Sbjct: 46 LHPRNPH-QGRYDFEVLTRALPELAKHTITNPKGESTINFSDSAAVRVLNQALLANYYGV 104
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSS-------NIIPTTSRNGDKVKGFDIGTGAN 127
+W IP+G LCP +P R++YIH+I DLL+ N PT G ++ DIGTGA+
Sbjct: 105 KFWDIPEGYLCPPIPGRADYIHYIADLLAQTTHVNKDNTPPT----GKEIHALDIGTGAS 160
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYP++G+ GW F SD+ +++ A ++NP + ++++
Sbjct: 161 AIYPIVGSQSYGWRFTASDIDPISVNTAALICETNPKLKSAVKVK--------------- 205
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+Q E + ++ + FD +C
Sbjct: 206 ----LQTEPKF--------------------------------IFKNIIGRQDYFDVVVC 229
Query: 248 NPPFFESMEEA---------------GLNPKTSC----------------GGTPEEMVCS 276
NPPF S+EEA G N GG +E+
Sbjct: 230 NPPFHASLEEAMEANSRKQHNLQRHRGKNENEQISRSSTKPGNAAQNLNFGGQHKELWSE 289
Query: 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTC 336
GGE AF+T++ ++S + W+T++V + N+K L L+++GV ++ E QGQ
Sbjct: 290 GGEIAFLTKMAKESQDFAEHVGWFTTLVSKSENVKPLQLLLKQLGVAQMRIIEMSQGQKS 349
Query: 337 RWGLAWSF 344
LAW F
Sbjct: 350 TRILAWRF 357
>gi|205829581|sp|Q1QEW1.2|RLMF_PSYCK RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
Length = 345
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 158/368 (42%), Gaps = 95/368 (25%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DF +L P + G I+++D A R L + LL + +G+
Sbjct: 29 LHPRNPH-QGRYDFEVLTRALPELAKHTITNPKGESTINFSDSAAVRVLNQALLANYYGV 87
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSS-------NIIPTTSRNGDKVKGFDIGTGAN 127
+W IP+G LCP +P R++YIH+I DLL+ N PT G ++ DIGTGA+
Sbjct: 88 KFWDIPEGYLCPPIPGRADYIHYIADLLAQTTHVNKDNTPPT----GKEIHALDIGTGAS 143
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
IYP++G+ GW F SD+ +++ A ++NP + ++++
Sbjct: 144 AIYPIVGSQSYGWRFTASDIDPISVNTAALICETNPKLKSAVKVK--------------- 188
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+Q E + ++ + FD +C
Sbjct: 189 ----LQTEPKF--------------------------------IFKNIIGRQDYFDVVVC 212
Query: 248 NPPFFESMEEA---------------GLNPKTSC----------------GGTPEEMVCS 276
NPPF S+EEA G N GG +E+
Sbjct: 213 NPPFHASLEEAMEANSRKQHNLQRHRGKNENEQISRSSTKPGNAAQNLNFGGQHKELWSE 272
Query: 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTC 336
GGE AF+T++ ++S + W+T++V + N+K L L+++GV ++ E QGQ
Sbjct: 273 GGEIAFLTKMAKESQDFAEHVGWFTTLVSKSENVKPLQLLLKQLGVAQMRIIEMSQGQKS 332
Query: 337 RWGLAWSF 344
LAW F
Sbjct: 333 TRILAWRF 340
>gi|449546255|gb|EMD37225.1| hypothetical protein CERSUDRAFT_95480 [Ceriporiopsis subvermispora
B]
Length = 333
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 52/268 (19%)
Query: 88 VPNRSNYIHWIEDLLSSNII--PTTSRNGDKVKGFDIGTGANCIYPLLGASL-LGWSFVG 144
VPNR NYI W+ED++ + + P RNG V+G DIGTGA+ IYPLLG W+F
Sbjct: 82 VPNRLNYILWLEDVVKTVRLAEPDAFRNG--VQGLDIGTGASAIYPLLGCRTDPTWTFTA 139
Query: 145 SDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHM 204
+D+ + ++A N+ +N L + +V S+ T +I L E+N+++ +
Sbjct: 140 TDIDSKSFQFARSNIATN----GLDDRIRVVQSDPTGAILAPLM------ENNLEL--QV 187
Query: 205 DEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKT 264
EE + + ++DF +CNPPF+ S E+ + +T
Sbjct: 188 SEE---------------------------IGDEAVRYDFTMCNPPFYSSREDIAQSAET 220
Query: 265 S--------CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISK 316
C G EM+ +GGE F+ +++ +S + RWYTSM+G+ S L +++
Sbjct: 221 KEYGPNAQICTGAEVEMITAGGEMTFVCQMVRESSKSRCRCRWYTSMLGKMSTLMEVVAL 280
Query: 317 LRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
LR++ + TE VQGQT RW +AWSF
Sbjct: 281 LRELNIDNYACTELVQGQTRRWVVAWSF 308
>gi|453087803|gb|EMF15844.1| Methyltransf_10-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 484
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 158/339 (46%), Gaps = 35/339 (10%)
Query: 14 PTIHPKNKYSENPPDFALLASLYPSFEPFVFYSR-DGRPRIDWTDFN---ATRELTRVLL 69
P K Y DF +LA F ++ DG W DF+ ++LT+ LL
Sbjct: 15 PRKKVKTDYYSRDVDFDVLAKHDADFAAISKSAKQDG-----WIDFHNPKVIQQLTKSLL 69
Query: 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGAN 127
+D GL+ +PD +LCP +P R NY+ WI+DLL +S+ KV G DIG GA+
Sbjct: 70 KYDFGLSLSLPDDRLCPPIPVRWNYVRWIQDLLDTTSSSFSELYDPERKVVGLDIGVGAS 129
Query: 128 CIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
CIY LL AS W G+D+ +LE+A++NV++N + I ++K+ E I E+
Sbjct: 130 CIYSLLACASRPEWHMAGTDIDTHSLEYAKRNVEAN-GFEDRIRLKKMKPEEQLIPI-EA 187
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
L D MD P SS + A SY + +
Sbjct: 188 L------DVEEMDFV----MTNPPFYSSEQDFLASYNDSYKNNNNHHNHKQHHNETPPTT 237
Query: 247 CNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR 306
N P P C G P EM+C G+ F TRI+E S+ L+ +WYT+M+
Sbjct: 238 QNVPL----------PSAVCIGAPNEMICPAGDVGFATRILEQSLLLRTRIQWYTTMLSH 287
Query: 307 KSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+L+ +ISKL+ +T T G +T R+ +AWS+
Sbjct: 288 MHSLQQIISKLKAHHITNFAVTTLHPGNKTKRYAVAWSW 326
>gi|336173323|ref|YP_004580461.1| rRNA (adenine-N(6)-)-methyltransferase [Lacinutrix sp. 5H-3-7-4]
gi|334727895|gb|AEH02033.1| rRNA (adenine-N(6)-)-methyltransferase [Lacinutrix sp. 5H-3-7-4]
Length = 297
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 155/345 (44%), Gaps = 74/345 (21%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H NK++ D L + P +P +F ++ G ID+ + + + L LL + +
Sbjct: 1 MHKNNKHNAQY-DLEKLVKVLPELQPHIFVNKHGNSTIDFANLESVKLLNTSLLKAYYNI 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
++W P+G LCP +P R +YIH++ DL I T + G K D+GTGANCIYPLLG
Sbjct: 60 DYWQFPEGNLCPPIPGRVDYIHYLNDL-----IKTLNITGAP-KILDVGTGANCIYPLLG 113
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ W F+ SD + A+ AE N+ + ++ E EI+ + +Q+
Sbjct: 114 NAEYNWRFLASDCNEKAIASAE-NIIAKNNLKE--EIKLI-----------------LQE 153
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ N+ + G+++ + F+ +CNPPF+++
Sbjct: 154 DENL--------------------------------IFKGILKPEDTFEATLCNPPFYKN 181
Query: 255 MEEA---------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
EA GL T G E+ GGE+AF+ + +S K WY
Sbjct: 182 EAEAIAATTRKLKGLGKSTDTVTRNFAGQANELWYKGGEKAFLHNYLYESSLFKTQCFWY 241
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
T +V K ++K + + L K+G T +K G +AW+F+
Sbjct: 242 TILVSNKDHVKTMKTSLTKLGATTIKVINMSLGNKQSRVVAWTFL 286
>gi|225710904|gb|ACO11298.1| methyltransferase METT10D [Caligus rogercresseyi]
Length = 436
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 155/336 (46%), Gaps = 77/336 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y P DF LA YP F + G +D+ + LT++LLL D GL
Sbjct: 7 MHQRNPYKVRP-DFKALAEKYPEFRSHLKTDLRGNVNLDFK--SGVGVLTKILLLQDFGL 63
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ +P G L PT+P R NY+ WI+D+L N R D ++G DIG G +CIYPLL A
Sbjct: 64 SMSLPTGALVPTLPLRFNYLLWIQDILELN-----QRRTD-IRGLDIGVGCSCIYPLLAA 117
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
WS +G + +L+ A+ N+ N +S+ I +
Sbjct: 118 RHFNWSMLGFENHPESLKHAQANITQN-QLSDKISVL----------------------- 153
Query: 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES- 254
SSSSF G V D F +CNPPFF+S
Sbjct: 154 ----------------SSSSFFRALG------------DTVLD-----FTMCNPPFFDSN 180
Query: 255 MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNL---- 310
EA P+ G EM+ GGE F+ +I++S+ +K R +T M+G+KS+L
Sbjct: 181 CYEA---PQEERPGLEHEMMTEGGEEEFVKNMIKESLQVKAQARIFTCMLGKKSSLIEIK 237
Query: 311 KFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVP 346
KFL S V + TEF QG+T RWG+ WSF P
Sbjct: 238 KFLYSLTDGVSWSF---TEFCQGKTMRWGIVWSFSP 270
>gi|302677604|ref|XP_003028485.1| hypothetical protein SCHCODRAFT_258453 [Schizophyllum commune H4-8]
gi|300102173|gb|EFI93582.1| hypothetical protein SCHCODRAFT_258453 [Schizophyllum commune H4-8]
Length = 557
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 199/520 (38%), Gaps = 170/520 (32%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y P DF LA Y + ++ + +G +D++D +A LT+ LL D GL
Sbjct: 1 MHPRNPY-RTPIDFTALAEAYHPLQSYLVRTANGGLTLDFSDADAQICLTKALLHRDFGL 59
Query: 76 NWWIPDGQLCPTVPNRS------------------NYIHWIEDLLSSNIIPTTSRNGDKV 117
+ + +LCP VPNR NYI W++D+L + T V
Sbjct: 60 DVQLTPERLCPPVPNRYALMSRLPGANERRASLRLNYILWLQDILEA----TQDDPSGPV 115
Query: 118 KGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176
G D+GTGA+ IYPLLG A+ W+FV +++ ++L +A +NV N
Sbjct: 116 LGIDVGTGASAIYPLLGCATDARWAFVATELDLLSLRFARENVARN-------------- 161
Query: 177 SESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236
+ G+S + E Q+S GP +L
Sbjct: 162 -----GSDKPYQGRSQRIEV-------------------------LQASEGGPLLLPLAA 191
Query: 237 RDGEQFDFCICNPPFFESMEEA--------------------GLNPKTSCG--------- 267
QF F +CNPPF+ES EE G+ ++ G
Sbjct: 192 YPDRQFAFSMCNPPFYESAEEIAACAAGKARPAVGARRAGSRGVARNSAAGSRQSTPGRE 251
Query: 268 -----GTPEEMVCSG-------------------------GERAFITRIIEDSVALKQTF 297
TP SG GE AF+ R++ +SV +
Sbjct: 252 TTPGRSTPSRHTTSGSRQSTPGPELATALAGAPVEMVTPGGEVAFVARMVAESVRYGERC 311
Query: 298 RWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF------------- 344
RWYTSM+G+ S++ +I TE VQGQT RW + WSF
Sbjct: 312 RWYTSMLGKLSSVAEIIDNY--------AITELVQGQTRRWAIGWSFTAVRLPDSLARVS 363
Query: 345 -------VPPARKIISP---HVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCK 394
+P ++ P H+A + S +E R E + SG + +
Sbjct: 364 SQALQSVLPLRNEMAQPLPQHIAVDTSWSERVEAAVR-----------EARGALSGVTVQ 412
Query: 395 LNASSFTVNITVSNDQCNTILKNEVNR-VDEGPTSKHLEE 433
NA ++ + I+ + + + + + R PT H +E
Sbjct: 413 TNAQTYALTISATANTWSRAARRKAQREASMQPTPDHHDE 452
>gi|323497383|ref|ZP_08102401.1| 23S rRNA mA1618 methyltransferase [Vibrio sinaloensis DSM 21326]
gi|323317466|gb|EGA70459.1| 23S rRNA mA1618 methyltransferase [Vibrio sinaloensis DSM 21326]
Length = 361
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 143/346 (41%), Gaps = 82/346 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L P V + G I+++D A + L + LL + + W IP G LCP
Sbjct: 57 DFKKLIHALPELAAHVIKNPKGESSINFSDPIAVKLLNKALLSAYYQVTEWDIPPGYLCP 116
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LLS R +V+ DIG GANCIYP++G + GW+++G+D
Sbjct: 117 PIPGRADYIHRLAELLSKEHKHLEHR---QVRALDIGVGANCIYPIVGTTQYGWNYIGAD 173
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
++ VDN+ + N + G ++
Sbjct: 174 ----------------------VDPESVDNANQIA-------------QQNSVLKGRVEC 198
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLN----- 261
+P S F G+++ E + CNPPF +S+ EA L
Sbjct: 199 RLQPQSRHFFK----------------GIIQANEFYHLTTCNPPFHKSLAEAELGTARKI 242
Query: 262 ------------------PKTSC----GGTPEEMVCSGGERAFITRIIEDSVALKQTFRW 299
KTS GG E+ C GGE AFI + +S W
Sbjct: 243 KNLSSNKNKRGQAQSAMPTKTSTILNFGGQKAELWCPGGEAAFIKNMAFESKEFSAQVLW 302
Query: 300 YTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+++++ +K N++++ L K G K E QGQ +AW+F+
Sbjct: 303 FSTLISKKENVRWMRKNLEKAGAVEAKVVEMSQGQKISRFVAWTFL 348
>gi|254460697|ref|ZP_05074113.1| methyltransferase [Rhodobacterales bacterium HTCC2083]
gi|206677286|gb|EDZ41773.1| methyltransferase [Rhodobacteraceae bacterium HTCC2083]
Length = 307
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 156/351 (44%), Gaps = 77/351 (21%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
+ T+HP+N++ + DFALL+ P E F + G ID+ + +A R L R LL
Sbjct: 3 RKSTLHPRNQHIDGY-DFALLSGHVPELEAFTIRNPTGLATIDFQNPDAVRMLNRALLKS 61
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+ + W IP LCP +P R++YIH + DLL+ + IPT G K+K DIGTGA+
Sbjct: 62 YYNVESWDIPANYLCPPIPGRADYIHHLADLLARDNGQKIPT----GRKIKALDIGTGAS 117
Query: 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESL 187
+YPL+G S GW D T V ++ + S I++L ++
Sbjct: 118 LVYPLIGQSAYGW-----DFTGVDIDAGA--LASAQKINDLNDL---------------- 154
Query: 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
+D + +S + F GV+ + F +C
Sbjct: 155 ---------------GIDLRHQGASRNIFK----------------GVITPDDMFHVTLC 183
Query: 248 NPPFFESMEEA-------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
NPPF S E+A G + + GG E+ C GGE FI ++IE+S A
Sbjct: 184 NPPFHASKEQAMKGTQRKWKNLGKGASDTLNFGGQHAELWCPGGEIKFIAQMIEESRAFA 243
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
W+TS+V +K +L + L + V + QGQ +AWS+V
Sbjct: 244 DQCVWFTSLVSKKDSLAPIRRILDRAKVE-YDVIDMAQGQKVSRFVAWSYV 293
>gi|209878408|ref|XP_002140645.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556251|gb|EEA06296.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 345
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 163/375 (43%), Gaps = 94/375 (25%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N + + DF L SL+P + ++ + + D+++ ELTR L+ + +
Sbjct: 18 LHPRNPHRYD--DFLELMSLFPPLKKYI-QIKGTKVIADYSNKEFLYELTRTLMNFRYNI 74
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLL-----------------------------SSNI 106
+W I G L PTVP+R+NY+H+I DLL S +I
Sbjct: 75 DWSISRGFLIPTVPSRANYVHYIADLLTPEHFYNTEIILRESNRDVNTIEGEYSEVSKSI 134
Query: 107 IPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS 166
IP G KV G DIG GANCIYPL+ GW GSD+++ ++ A VK N
Sbjct: 135 IPL----GLKVIGIDIGCGANCIYPLICHKTFGWKMFGSDLSNESINIASSIVKRN---- 186
Query: 167 ELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSY 226
+ +++ D +N+ + G +D SSS ++
Sbjct: 187 ---------------GLSKNINFLYQDDPTNI-LCGILD------SSSLLDI-------- 216
Query: 227 HGPPVLVGVVRDGEQFDFCICNPPFFESMEEA--GLNPKTSCGGTPEEMVCSGGERAFIT 284
F F +CNPPF+ S + +P G E++ +GGE FI
Sbjct: 217 --------------NFTFSMCNPPFYSSFNDYTHSTHPSRQGEGKLFEIITTGGEGVFIE 262
Query: 285 RIIEDSVALKQTFRWYTSMVGRKSNL----KFLISKLRKVG----VTIVKTTEFVQGQTC 336
+I S+ + WYT++V + +NL K L+ R+ G + ++T QG
Sbjct: 263 NMIHQSLKFPKRVIWYTTLVSKLNNLKRCRKLLLDISRQGGNEKKLEAIRTITMEQGNHV 322
Query: 337 RWGLAWSFVPPARKI 351
RW LAWSF +I
Sbjct: 323 RWILAWSFYSKIDRI 337
>gi|66475492|ref|XP_627562.1| YbiN-like RNA methylase (NPPY variety; HemK family)
[Cryptosporidium parvum Iowa II]
gi|32398781|emb|CAD98491.1| conserved hypothetical protein [Cryptosporidium parvum]
gi|46229013|gb|EAK89862.1| YbiN-like RNA methylase (NPPY variety; HemK family)
[Cryptosporidium parvum Iowa II]
Length = 348
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 176/405 (43%), Gaps = 100/405 (24%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
MG + ++++ +H +N ++ + DF L+ YP + + + + RI++ A
Sbjct: 1 MGQANNKNQQKKATQLHHRNVHAND--DFLFLSERYPELKKCIKII-NNKVRINYNP-AA 56
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR-------- 112
+++VLL + + +NW IPD L PT+P+R+NY+H+I DLL+ T +
Sbjct: 57 LHCISKVLLHYRYNINWDIPDKFLIPTIPSRANYVHFISDLLTPEHFYNTEKVNDEGLRN 116
Query: 113 ---------------------NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151
G +V GFDIG GANCI+ LL + W+ +GSD++ +
Sbjct: 117 DLKTKTCIEGGTDVCFSELIPRGKQVLGFDIGIGANCIFSLLCNKIYSWNMIGSDISIES 176
Query: 152 LEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPS 211
L S+ +++ K+
Sbjct: 177 L-----------------------------SVSDTIIKKN-------------------- 187
Query: 212 SSSSFNLPAGAQSSYHGPP--VLVGVVRDGE----QFDFCICNPPFFESMEEAGLN--PK 263
NL + + P +L G++ E +F F ICNPP+++S+E++ +N P
Sbjct: 188 -----NLCGCIKLLHQEKPEYILFGILDKTEIEDLKFSFTICNPPYYDSVEDSEINMHPA 242
Query: 264 TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323
E++ GGE FI ++ +S + WYTS V + NLKFL S L+K +
Sbjct: 243 RFRSCQNYEIITHGGESQFILKLYFESKNFSKRVIWYTSQVSKLKNLKFLKSVLKKEIIN 302
Query: 324 ----IVKTTEFVQGQTCRWGLAWSFV-PPARKIISPHVAEKKNLS 363
++ T QG+ +W +AWSF R I + KN+S
Sbjct: 303 NELKSLRYTTLKQGKHDKWVIAWSFFEKEERTSILKFLRNNKNMS 347
>gi|320589949|gb|EFX02405.1| duf890 domain containing protein [Grosmannia clavigera kw1407]
Length = 495
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 143/324 (44%), Gaps = 82/324 (25%)
Query: 48 DGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNII 107
D +ID+ D A ++LT LL D GL +PD +LCP VP+R YI W++ LL S+
Sbjct: 43 DNHGQIDFQDAQAVKQLTTALLRRDFGLAVDLPDDRLCPPVPSRHTYILWLKMLLDSS-- 100
Query: 108 PTTSRNGDKVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS 166
++ R + + G DIGTGA+CIYPLLG W FV +D+ + +L A NV+ N +
Sbjct: 101 -SSGRATEPLIGLDIGTGASCIYPLLGCVQRPDWCFVATDIDEDSLGCARANVRRN-QLE 158
Query: 167 ELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSY 226
+ I + V TP D+ P + S L
Sbjct: 159 DRIRVLPV----RTP-----------------------DDRLIPDETGSRPL-------- 183
Query: 227 HGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLN-------PKTSCGGTPEEMVCSGGE 279
F + NPPF+ES E + P C G EMV GGE
Sbjct: 184 ----------------SFTMTNPPFYESAAEMTASARAKERPPHAVCTGAANEMVTPGGE 227
Query: 280 RAFITRIIEDSVALKQTFR-----WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG- 333
AF+ R++ +SV R WYT+M+G+ S+L ++ +LR G+ T FV G
Sbjct: 228 VAFVGRLLAESVERHAAGRDVTGCWYTAMLGKLSSLVAVVEQLRARGIDNYAVTAFVPGS 287
Query: 334 -------------QTCRWGLAWSF 344
+T RW + WSF
Sbjct: 288 SSKSSKSSKSSKSKTRRWAIGWSF 311
>gi|443244044|ref|YP_007377269.1| putative SAM-dependent methyltransferase [Nonlabens dokdonensis
DSW-6]
gi|442801443|gb|AGC77248.1| putative SAM-dependent methyltransferase [Nonlabens dokdonensis
DSW-6]
Length = 277
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 81/329 (24%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L + +P E ++ S G ID+ D + E LL H + + +W +P+G L P
Sbjct: 12 DFEKLTATHPELEKYLINSPTGSVTIDFGDAASILEFNTALLKHHYKVKYWRLPEGSLYP 71
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH I DL+ G+K G DIG GA+ IYP+LG ++ W VG D
Sbjct: 72 PIPGRADYIHHISDLVGK---------GEK-NGLDIGCGASAIYPILGNNIYDWKMVGCD 121
Query: 147 MTDVALEWAEKNVKSNPHISELIEIR-KVDNSESTPSIQESLTGKSVQDESNMDMSGHMD 205
+ D ++ +A+KN N + IEIR ++D + +L +++ + D +
Sbjct: 122 VADESVAFAKKNTSKN----DAIEIRHQID--------KRNLFKNVIREGESFDFT---- 165
Query: 206 EEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE---AGLNP 262
+CNPPF+ S EE A +N
Sbjct: 166 ----------------------------------------MCNPPFYGSEEEAVKANMNK 185
Query: 263 KTSCG---------GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
+ G G E+ C+GGE FI R+I++SVA K W+T ++ RK NLK
Sbjct: 186 QRKLGTYEERRNFAGHAHELWCNGGEALFIKRMIKESVAFKSQVGWFTCLLSRKQNLKKP 245
Query: 314 ISKLRKVGVTIVKTTEFVQGQTCRWGLAW 342
+ +L K+G + E G +AW
Sbjct: 246 LKQLEKLGAE-TRVVEMTTGNKESRFVAW 273
>gi|402582580|gb|EJW76525.1| hypothetical protein WUBG_12564 [Wuchereria bancrofti]
Length = 245
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 7/159 (4%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y + PPDF+LLA + F + +G+ ++++ D NA R L R LLL D GL
Sbjct: 91 MHPRNPYKDKPPDFSLLADKFVEFRSHCYIGSNGKLKMNFRDTNAVRILARTLLLSDFGL 150
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP L P +P R NYI I+DLL +N I + V G DIGTGA+C+Y LLGA
Sbjct: 151 DVDIPADCLVPRIPQRLNYILVIDDLLKTNGI------AEDVVGIDIGTGASCVYALLGA 204
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174
LGW F+ +D A+E A +NV+ N +SE IE+ +V
Sbjct: 205 KQLGWRFLATDADPFAVEIANRNVQKN-GMSERIEVVRV 242
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
++++ D NA R L R LLL D GL+ IP L P +P R NYI I+DLL +N I
Sbjct: 11 KMNFRDTNAVRILARTLLLSDFGLDVDIPADCLVPRIPQRLNYILVIDDLLKTNGI---- 66
Query: 112 RNGDKVKGFDIGTGANCIYPL 132
+ V G DIG +Y +
Sbjct: 67 --AEDVVGIDIGRRRPVLYSM 85
>gi|89891114|ref|ZP_01202622.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium
BBFL7]
gi|89516758|gb|EAS19417.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium
BBFL7]
Length = 289
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 73/331 (22%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
D LL+ YP + DG ID+T+ ++ L LL +G+N W +P L P
Sbjct: 12 DLDLLSQTYPDLKFHFITKEDGMISIDFTNPSSVLALNSALLKEHYGVNHWELPTDYLSP 71
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDK-VKGFDIGTGANCIYPLLGASLLGWSFVGS 145
+P+R +YI + DL+ G+K + G DIGTGAN IYP+LG ++ W +GS
Sbjct: 72 PIPSRVDYILHLADLV-----------GEKNITGLDIGTGANMIYPILGTAIYNWKMIGS 120
Query: 146 DMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMD 205
++ + ++A+ S+QE +T + SN+ + D
Sbjct: 121 EVDRDSYDFAK-------------------------SLQEKITMPKSRKISNIKLRFQED 155
Query: 206 EEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE---AGLNP 262
+ +L +++ E +DF +CNPPF+ S +E A L
Sbjct: 156 RGS----------------------ILKNIIKPQELYDFTMCNPPFYNSEDEAIKANLRK 193
Query: 263 KTSCG---------GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313
+ G G E+ C+GGE F+ R+I++SVA + W+TS++ RK NL L
Sbjct: 194 NKNLGNSVSERNFAGKSHELWCNGGEALFVKRLIKESVAYQSQVGWFTSLISRKENLPKL 253
Query: 314 ISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+L K+ T K G +AW F
Sbjct: 254 EKQLTKLKAT-YKIVPMNSGNKKSRFIAWKF 283
>gi|312884462|ref|ZP_07744166.1| putative SAM-dependent methyltransferase [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309367774|gb|EFP95322.1| putative SAM-dependent methyltransferase [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 344
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 84/367 (22%)
Query: 13 RPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHD 72
+ +H +N + N DF L P+ + + +G ID++D + + L + LL
Sbjct: 24 KAGLHKRNLHRGNY-DFDRLVKAEPALSAQIIVTPNGLSSIDFSDPYSVKILNKALLNLY 82
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYP 131
+ + +W IP G LCP +P R++YIH + DLL + T ++V+ DIGTGAN +YP
Sbjct: 83 YKIKFWDIPKGYLCPPIPGRADYIHRLSDLLFEDYADTQH---NRVRALDIGTGANAVYP 139
Query: 132 LLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
++G + W VGSD+ V++ K +K N + +E R
Sbjct: 140 IIGCTQYQWQCVGSDIDPVSVSNVVKIIKENSILENKVECR------------------- 180
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
+Q++S + G++ E ++ ICNPPF
Sbjct: 181 LQNDSRR--------------------------------IFKGIIGPNEYYEVSICNPPF 208
Query: 252 FESMEE--AGLNPKT--------------------------SCGGTPEEMVCSGGERAFI 283
+S++E AG N K + GG E+ C GGE F+
Sbjct: 209 HKSLKEAQAGTNRKINNLAKNRAKRRQESELTSGKEGANKLNFGGQRAELWCPGGEARFV 268
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
+ +S W+++++ +K N+++L L KVG +K E QG +AW+
Sbjct: 269 KDMALESRHFSSQVLWFSTLISKKENVRWLRKNLEKVGAEEIKIIEMKQGNKQSRFVAWT 328
Query: 344 FVPPARK 350
F P ++
Sbjct: 329 FHPIEKR 335
>gi|149926173|ref|ZP_01914435.1| hypothetical protein LMED105_01533 [Limnobacter sp. MED105]
gi|149824991|gb|EDM84203.1| hypothetical protein LMED105_01533 [Limnobacter sp. MED105]
Length = 302
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 46/338 (13%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP N + +N DF L YP+ + +V + GR ID+ A + L LL H +G
Sbjct: 4 TLHPNNAH-KNGYDFDALVLTYPALKKYVKPNNHGRDSIDFASPAAVKALNCALLKHHYG 62
Query: 75 L-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ W +P+G LCP +P R +YIH+ DLL+S+ I + + +VK DIGTGAN IY LL
Sbjct: 63 IAGWTVPEGYLCPPIPGRVDYIHYAADLLASSGIKAS--DARQVKMLDIGTGANGIYSLL 120
Query: 134 GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193
A + GW GS++ V L+ + +N + LI++R + I E + ++
Sbjct: 121 AAKVYGWHCSGSEIDPVGLKNLSSILDNNSDLKHLIDLRLQRDKR---KIFEGV----IK 173
Query: 194 DESNMDMS------GHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247
D+S +EA S+ N A ++ G VG+
Sbjct: 174 PGEKFDLSVCNPPFHASQKEAVKSNQRKVNSLAFSRGEKPGSKAPVGL------------ 221
Query: 248 NPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
+ GG E+ C GGE F+ +I +S + RW+T++V +
Sbjct: 222 -----------------NFGGQKNELWCEGGEIGFLQTMINESAQFGKQCRWFTTLVSKA 264
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
N+ +R G + E QG +AWSF
Sbjct: 265 ENVGQAKWHMRNAGARDILEVEMEQGNKTTRIVAWSFA 302
>gi|119190845|ref|XP_001246029.1| hypothetical protein CIMG_05470 [Coccidioides immitis RS]
Length = 398
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 139/284 (48%), Gaps = 71/284 (25%)
Query: 93 NYIHWIEDLLSSNIIPTTSRNG----DKVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDM 147
NY+ W++DL+ + R G +V G DIGTGA+CIYPLL A W FV +D+
Sbjct: 40 NYVLWLQDLIDTT--NDDYRGGYDPEREVIGLDIGTGASCIYPLLACAQRPKWMFVATDI 97
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
D ++A++NV K +N +S +
Sbjct: 98 NDKNFQYAQENV-------------KRNNLQSRIRV------------------------ 120
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE----AGLN-- 261
+++ P + +G E+ F +CNPPF+ES EE A L
Sbjct: 121 --------------VKTTAEDPLIALGDKVPFERLQFTMCNPPFYESEEEMLASASLKHR 166
Query: 262 -PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKV 320
P ++C G P EMV +GGE +F+ RII++S+ L+ +WYTSM+G+ S++ LI KL +
Sbjct: 167 PPNSACTGAPVEMVTAGGEESFVQRIIDESLKLRNKVQWYTSMLGKLSSVTKLIEKLLES 226
Query: 321 GVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVAEKKNLS 363
G TEFVQG +T RW +AWS+ + + P +A +N+S
Sbjct: 227 GNQNWAVTEFVQGSKTRRWAIAWSW-----RDLRPTMAVARNIS 265
>gi|46116712|ref|XP_384374.1| hypothetical protein FG04198.1 [Gibberella zeae PH-1]
Length = 449
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 130/265 (49%), Gaps = 63/265 (23%)
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147
V NR NYI W++ LL ++ T ++ V G DIGTGA+CIYPLLG + W+F+ +D+
Sbjct: 85 VTNRHNYILWLKRLLDTS---TYEKHAQDVVGLDIGTGASCIYPLLGCTERNWNFIATDI 141
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
+LE+A K N ++ L + K+ + + T ++ +DE
Sbjct: 142 DSKSLEYARK----NATLNNLDQRIKIVDRKWTDNLIP------------------LDE- 178
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF-------ESMEEAGL 260
H P + F + NPPF+ ES ++
Sbjct: 179 ------------------LHIPRIA-----------FTMSNPPFYKSEQELVESAKKKSQ 209
Query: 261 NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKV 320
P T+C G EM+ +GGE AF+ RI+ +S+ L+ +WYTSM G +S+L + KL++
Sbjct: 210 APFTACTGAKVEMITTGGEVAFVDRILNESLVLRDRVQWYTSMFGFQSSLVRFVDKLKEN 269
Query: 321 GVTIVKTTEFVQG-QTCRWGLAWSF 344
+ TEFVQG QT RW +AWSF
Sbjct: 270 NICNYAVTEFVQGSQTRRWAIAWSF 294
>gi|85058897|ref|YP_454599.1| hypothetical protein SG0919, partial [Sodalis glossinidius str.
'morsitans']
gi|84779417|dbj|BAE74194.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 224
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ DF +LA+ P PFV + G P +D+ A +L R LLLH
Sbjct: 64 QKAALHPRNRHCGGY-DFTVLAAACPPLAPFVRLTPAGTPSVDFASPAAVTQLNRTLLLH 122
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
D+GL W IP G LCP VP R +Y+H + DLL+S R G +V DIG GANCIY
Sbjct: 123 DYGLRHWDIPAGFLCPPVPGRPDYLHHLADLLASGNGGRIPR-GRRVMLLDIGVGANCIY 181
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173
P++G GW F GSD+ +L WA++ V NP ++ + +R+
Sbjct: 182 PIIGHHEYGWRFTGSDIDSPSLRWAQQIVDMNPSLAGALRLRR 224
>gi|445259817|ref|ZP_21409706.1| 23S rRNA mA1618 methyltransferase, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|444888712|gb|ELY12244.1| 23S rRNA mA1618 methyltransferase, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 252
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 70/291 (24%)
Query: 54 DWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
D+ + A + L + LL H + + W IP G LCP VP R++YIH + DLL TT
Sbjct: 1 DFANPQAVKALNKALLAHFYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGS 56
Query: 113 NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172
+ D+G GANCIYPL+G GW F GS+++D A+ A+ +++N +S I +R
Sbjct: 57 IPAQATILDVGVGANCIYPLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLR 116
Query: 173 KVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL 232
+ + +P++ +
Sbjct: 117 R---------------------------------QKDPAA------------------IF 125
Query: 233 VGVVRDGEQFDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGE 279
G++ E +D +CNPPF +S A G N + GG +E+ C GGE
Sbjct: 126 TGIIHKNEFYDATLCNPPFHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGE 185
Query: 280 RAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG-VTIVKTTE 329
AFI ++I +S + ++ W+T++V R NL L L + G V +VK +
Sbjct: 186 VAFIKKMIAESQSFRRQVLWFTTLVSRGENLPPLYRALTEAGAVKVVKKRD 236
>gi|229515010|ref|ZP_04404470.1| hypothetical protein VCB_002663 [Vibrio cholerae TMA 21]
gi|229347715|gb|EEO12674.1| hypothetical protein VCB_002663 [Vibrio cholerae TMA 21]
Length = 326
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 146/333 (43%), Gaps = 81/333 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRH-RGQYDFPALIKAVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPQLNHSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A V+SN + IE R +NS+
Sbjct: 165 VTEYGWSWVGSDVDSVSIQQASLIVQSNSKLQGHIECRLQNNSQH--------------- 209
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ G++ GE++ CNPPF S
Sbjct: 210 ------------------------------------IFQGIIGAGERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFITRIIED 289
+ +A + + + GG E+ C GGE AFI ++ +
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIGKMAVE 293
Query: 290 SVALKQTFRWYTSMVGRKSNLKFLISKLRKVGV 322
S + W+T+++ + N++ + +L K+G
Sbjct: 294 SQQFAEQVLWFTTLISKGDNVRGMKKQLEKLGA 326
>gi|110637090|ref|YP_677297.1| putative SAM-dependent methyltransferase [Cytophaga hutchinsonii
ATCC 33406]
gi|123354780|sp|Q11XA9.1|RLMF_CYTH3 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
gi|110279771|gb|ABG57957.1| 23S rRNA m(6)A-1618 methyltransferase [Cytophaga hutchinsonii ATCC
33406]
Length = 322
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 161/348 (46%), Gaps = 45/348 (12%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
M K ++ + +HP+NK+ E DF L + P +V + ID+ + A
Sbjct: 1 MAEKNKKEHPVTKDRLHPRNKHRERY-DFDALIATTPELAQYVTLNIYNDQSIDFFNPAA 59
Query: 61 TRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLL---SSNIIPTTSRNGDK 116
L + LL H +G++ W IP+G LCP +P R++YIH I LL ++++IP G
Sbjct: 60 VLCLNQALLKHYYGIDEWNIPEGYLCPPIPGRADYIHNIAALLGTSANDVIPV----GPA 115
Query: 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176
+K DIG GANC+YP++G + GWSFVG+D+ V++ A+ V N + +EIR ++
Sbjct: 116 IKCLDIGVGANCVYPIIGNNEYGWSFVGADVDPVSVASAKNIVDKNKVLQGNVEIRLQNH 175
Query: 177 SESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236
+D+ + E E + N P A + G +
Sbjct: 176 P--------------------LDIFYGIIGEGERFDVTICNPPFHASAE----DAAAGTL 211
Query: 237 RDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQT 296
R + + +A LN GG E+ C GGE AF+ +I +S +
Sbjct: 212 RKLSNLQ--------HKKVTKANLN----FGGQHNELWCEGGESAFVREMILESKKFAAS 259
Query: 297 FRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+++++ +++NL+ +L + V+T QG +AW+F
Sbjct: 260 CLWFSTLISKQTNLQKAYDQLEVLAPFDVRTIPMGQGNKSSRLIAWTF 307
>gi|238757268|ref|ZP_04618455.1| Ribosomal RNA large subunit methyltransferase F [Yersinia aldovae
ATCC 35236]
gi|238704646|gb|EEP97176.1| Ribosomal RNA large subunit methyltransferase F [Yersinia aldovae
ATCC 35236]
Length = 300
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 144/320 (45%), Gaps = 76/320 (23%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+E+ +HP+N++ DF +L+ P F+ + G ID++D A + L R LL
Sbjct: 24 KEKSGLHPRNRHRSRY-DFDVLSVSCPELVSFLAPTAYGDISIDFSDPLAVKMLNRALLK 82
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
H +G+ W IP LCP +P R++Y+H + DLL+S+ +IP G + DIG GA
Sbjct: 83 HFYGIEHWDIPADFLCPPIPGRADYLHHLADLLASSNAGVIP----QGKNIALLDIGVGA 138
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQES 186
NCIYP++G GW F G+++ A+ A+ V NP + + +R
Sbjct: 139 NCIYPIIGQREYGWRFTGTEIDPQAVSAAKMVVSMNPTLRNALRLR-------------- 184
Query: 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCI 246
++ +P + + GV E++D +
Sbjct: 185 -------------------QQKDPQA------------------IFDGVWLPNERYDATL 207
Query: 247 CNPPFFESME----------------EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
CNPPF S E + P + GG E+ C GGE F+ R+I +S
Sbjct: 208 CNPPFHASAEEAAATTRRKLHKLGKGDVAAKPVQNFGGKNSELWCEGGEEGFVKRMIVES 267
Query: 291 VALKQTFRWYTSMVGRKSNL 310
VA Q W+TS++ +K++L
Sbjct: 268 VAKGQNCFWFTSLISKKNHL 287
>gi|212537101|ref|XP_002148706.1| DUF890 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068448|gb|EEA22539.1| DUF890 domain protein [Talaromyces marneffei ATCC 18224]
Length = 434
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 148/326 (45%), Gaps = 63/326 (19%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF LA P F + ++D++D ++ R+LT+ LL D L +PD +LCP
Sbjct: 13 DFRALALTSPEFAKRL----KSNDQLDFSDPDSVRQLTKSLLERDFKLVVDLPDDRLCPP 68
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGD-------KVKGFDIGTGANCIYPLLG-ASLLG 139
+PNR NYI W++DLL T+SR G +V G DIGTG IYPLLG +S
Sbjct: 69 IPNRFNYILWLQDLLD-----TSSRTGTDQYDLNRQVLGLDIGTGCCAIYPLLGCSSRPR 123
Query: 140 WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMD 199
W FV +D+ + + K V N + + N P + + D +
Sbjct: 124 WRFVATDIDGSNISSSRKVVSDNKLDDRITILETKPNDPLIPIDRLDV------DRLDFV 177
Query: 200 MSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAG 259
M E+E SS A A+S PPF
Sbjct: 178 MCNPPFYESEEELVSS----ARAKS-----------------------RPPF-------- 202
Query: 260 LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319
++C G EM+ GGE AFI +++ S+ALK WYTSM G+ S++ ++ KL
Sbjct: 203 ----SACTGAAVEMITPGGEVAFIESLVQQSLALKTHILWYTSMFGKLSSVSVVVQKLLD 258
Query: 320 VGVTIVKTTEFVQGQ-TCRWGLAWSF 344
G+ TEFVQG+ T RW + WSF
Sbjct: 259 SGINNWAVTEFVQGKGTRRWAVGWSF 284
>gi|378734633|gb|EHY61092.1| ribosomal RNA large subunit methyltransferase F [Exophiala
dermatitidis NIH/UT8656]
Length = 522
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 165/360 (45%), Gaps = 88/360 (24%)
Query: 18 PKNKYSENPPDFALLASLYPSFEPFVFYSRDGRP--RIDWTDFNATRELTRVLLLHDHGL 75
P N Y EN DF LA YP F ++ +P ++D++D + R+LT+ LL D L
Sbjct: 4 PDNIY-ENDVDFTTLALQYPQF------AKKLKPNGQLDFSDPESVRQLTKSLLHRDFDL 56
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD---KVKGFDIGTGANCIYPL 132
+P+ +LCP VPNR NYI +I+ LL + P D V G DIGTG++ IYPL
Sbjct: 57 AIDLPEDRLCPPVPNRFNYILFIQRLL-DDTSPDWHEGYDPNRSVIGLDIGTGSSAIYPL 115
Query: 133 LGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKS 191
L W F+ +D+ + +A +N+ +N + I++ D + T E +
Sbjct: 116 LACRQRPAWRFLATDIDEKNRTYALQNIAAN-SLEARIKLLDTDPTGQTLIPVEEI---- 170
Query: 192 VQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
V +G+ E+ D + NPPF
Sbjct: 171 ---------------------------------------VRMGI----ERIDTVMTNPPF 187
Query: 252 F-------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL----------- 293
+ ES + P +SC G P EM+ GGE AF++++I++S +L
Sbjct: 188 YPSSESLLESAHKKSRPPNSSCTGAPIEMITPGGEVAFVSQLIDESYSLSLSKARQETSG 247
Query: 294 -KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-------QTCRWGLAWSFV 345
+ +W++SM+G+ S++ ++ L+ T TEFVQG +T RW +AWS++
Sbjct: 248 RRLQIQWFSSMLGKLSSVSDIVEALKSRDCTNFAVTEFVQGSQAPKKAKTRRWCVAWSWM 307
>gi|134075779|emb|CAK39316.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 139/297 (46%), Gaps = 67/297 (22%)
Query: 63 ELTRVLLLHDHGLNWWIPDGQLCPTVPN---RSNYIHWIEDLLSSNIIPTTSRNGD---K 116
+LT+ LL D L IP+ +LCP VP+ R NYI W++DLL + N D +
Sbjct: 13 QLTKSLLQRDFELKVEIPENRLCPPVPDPKYRLNYILWLQDLLDTTG-DEYRDNYDPDRE 71
Query: 117 VKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175
V G DIGTG IYPLLG S+ W FV +D+ + + + N + IEI + D
Sbjct: 72 VIGLDIGTGCCSIYPLLGCSMRPHWRFVATDIDKDNIRTSRDTISKN-KLDSRIEIIQTD 130
Query: 176 NSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGV 235
+ + L N+D
Sbjct: 131 PKDELIPLDTKL---------NVD------------------------------------ 145
Query: 236 VRDGEQFDFCICNPPFFESMEEAGLN-------PKTSCGGTPEEMVCSGGERAFITRIIE 288
+ DF +CNPPF+ S +E + P ++C G EMV +GGE AFITR+IE
Sbjct: 146 -----RLDFTMCNPPFYASRDELIASAEAKERPPFSACTGAEVEMVTTGGEIAFITRMIE 200
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+S+ L++ WYT+M+G+ S++ LI L + TEFVQG +T RW ++WS+
Sbjct: 201 ESLRLRERVIWYTTMLGKLSSVSVLIETLLEHKNNNYAVTEFVQGNKTRRWAISWSW 257
>gi|259480300|tpe|CBF71304.1| TPA: DUF890 domain protein (AFU_orthologue; AFUA_7G05590)
[Aspergillus nidulans FGSC A4]
Length = 434
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 153/315 (48%), Gaps = 77/315 (24%)
Query: 59 NATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVK 118
N ++LT LL D L+ IP+ +LCP VPNR NY+ + L +PT V+
Sbjct: 39 NIDQQLTVSLLKRDFDLDVNIPETRLCPPVPNRLNYVLCVTGL--DMCVPTPF-----VR 91
Query: 119 GF---DIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174
F GTG IYP+LG W+F+ +D+ D +N+KS+ E K
Sbjct: 92 KFLSPTSGTGCCSIYPILGVRTRPNWTFIATDIDD-------ENIKSS------TETVKA 138
Query: 175 DNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234
+N ES I V+ ++ D+ S N +G
Sbjct: 139 NNLESRIRI--------VKTNADNDLI-------------SLNT--------------LG 163
Query: 235 VVRDGEQFDFCICNPPFFESMEEAGLNPK-------TSCGGTPEEMVCSGGERAFITRII 287
V E+ DF +CNPPF+ S +E + K ++C G EMV GGE +F++RI+
Sbjct: 164 V----ERLDFTMCNPPFYSSQDEMVASAKDKDRPPFSACTGAEIEMVTRGGEVSFVSRIV 219
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF-- 344
+S+AL+ WYTSM+G+ S++ LI +L ++G T TEFVQG +T RW +AWS+
Sbjct: 220 TESIALQDKVLWYTSMLGKLSSVSTLIERLIELGNTNYAVTEFVQGNKTRRWAIAWSWAD 279
Query: 345 ----VPPARKIISPH 355
V AR I SP+
Sbjct: 280 RRPAVSVARGIKSPN 294
>gi|452845842|gb|EME47775.1| hypothetical protein DOTSEDRAFT_42114 [Dothistroma septosporum
NZE10]
Length = 436
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 51/329 (15%)
Query: 22 YSENPPDFALLASLYPSFEPFVFY-SRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIP 80
Y + DF LA P F + RDG I++ D ++LT+ LL D L+ +P
Sbjct: 6 YYDRDVDFDDLAKRDPDFATISQHGKRDGF--INFQDTKIVQQLTKSLLKIDFNLSIELP 63
Query: 81 DGQLCPTVPNRSNYIHWIEDLL-SSNIIPTTSRN-GDKVKGFDIGTGANCIYPLLGASLL 138
+ +LCP VP R NY+ W ++LL ++N S N G ++ G DIG GA+CIY LL S
Sbjct: 64 EDKLCPPVPVRWNYVRWAQELLDTTNEQYRESFNPGREIFGLDIGVGASCIYSLLACSTR 123
Query: 139 -GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ-DES 196
W G+D++ +L WA+KN++ N + I++ +V N + L +++ +E
Sbjct: 124 ESWRMAGTDISAESLIWAQKNIEGN-ELKSRIKLTQVSNDGAV------LPFDTLKIEEL 176
Query: 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESME 256
++ M+ P SS + + A+ S G
Sbjct: 177 DLVMTN------PPFYSSQSDFESAAKLSEDGKAA------------------------- 205
Query: 257 EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISK 316
P G EM+C GG+ F+TRI+ +S+ L++ +WYT+M+ + S+L+ +I+K
Sbjct: 206 -----PSAVLTGASNEMICPGGDVGFVTRILNESLRLRERVQWYTAMLSKLSSLQQIIAK 260
Query: 317 LRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
L++ G+ T G +T R+ +AWSF
Sbjct: 261 LKEHGINNFAVTSLHPGHRTKRYAVAWSF 289
>gi|169605651|ref|XP_001796246.1| hypothetical protein SNOG_05851 [Phaeosphaeria nodorum SN15]
gi|160706808|gb|EAT86915.2| hypothetical protein SNOG_05851 [Phaeosphaeria nodorum SN15]
Length = 430
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 138/307 (44%), Gaps = 67/307 (21%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
++D+ D + L++ +L D GL +PD +LCP +PNR NY+ WI L+ S P S
Sbjct: 34 KLDFQDPATVKALSKAILKADFGLQLEVPDDRLCPPIPNRWNYVTWIHGLIDSTS-PDFS 92
Query: 112 RNGD---KVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE 167
D K+ G DIGTGA+ IY +L S W +D+ + E A +N+ N ++
Sbjct: 93 YGYDPERKITGLDIGTGASAIYAMLSLKSRPDWRMCATDIDKKSFESAARNLALNNLMTR 152
Query: 168 LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYH 227
++ +E P I L G VQ
Sbjct: 153 TTLLQ---TTELNPLI--PLAGLGVQ---------------------------------- 173
Query: 228 GPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLN---------PKTSCGGTPEEMVCSGG 278
DF +CNPPFF ++++ + P C G EMVC G
Sbjct: 174 -------------TLDFTMCNPPFFTNLDDMSASLKGEGKSWKPNAVCTGAEVEMVCPDG 220
Query: 279 ERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCR 337
+ F+T+I+ +S+ L++ RWYTSM+G+ ++ K +I+ L+K VT G T R
Sbjct: 221 DLGFVTKIVNESLVLREKVRWYTSMLGKLTSAKAIITLLKKNDVTNWAVGVIDTGSSTKR 280
Query: 338 WGLAWSF 344
W +AWSF
Sbjct: 281 WIVAWSF 287
>gi|437843410|ref|ZP_20846965.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|437986613|ref|ZP_20853580.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|445152658|ref|ZP_21390934.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|435295542|gb|ELO71993.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435337423|gb|ELP07000.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|444853687|gb|ELX78755.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
Length = 235
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 70/288 (24%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITR 285
F +S A G N + GG +E+ C GGE AFI +
Sbjct: 188 FHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKK 235
>gi|403344107|gb|EJY71390.1| putative SAM-dependent methyltransferase [Oxytricha trifallax]
Length = 280
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 137/311 (44%), Gaps = 63/311 (20%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIP 108
+D+ D A ELTR +L +GL + +P L P VP R Y+ WI+ L + II
Sbjct: 8 LDFKDEKALLELTRAILYTQYGLEQYDLPKENLIPRVPQRVAYLDWIKQLFDTVEKEIIS 67
Query: 109 TTSRNG-----DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163
+ + ++ GFDIGTGAN IYP+LG F GSD+ +++WA + +
Sbjct: 68 ESMEDNLIDESRQLIGFDIGTGANLIYPILGILKYNMKFAGSDINQDSIQWATTEILN-- 125
Query: 164 HISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQ 223
+QE+ G+ L +
Sbjct: 126 ---------------KNKKLQENFIGQ-------------------------IRLQKDYE 145
Query: 224 SSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFI 283
S G ++ V E+FDF +CNPPFF EE ++ C T E GGE F+
Sbjct: 146 SVLEG---VISVNEIDEKFDFTMCNPPFFNHEEERTFRHQSVCPITKSEDSTIGGEIRFL 202
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKF----LISKLR-----KVGVTIVKTTEFVQGQ 334
++S+ K +W+TS++G+K+ +F L+S ++ + ++ + E +GQ
Sbjct: 203 CEYAQESIRFKNQVKWFTSLIGKKTTYEFIKNYLVSMIKFDSGEEQYDILIASGEIEEGQ 262
Query: 335 TCRWGLAWSFV 345
T RW + W F+
Sbjct: 263 TKRWLIGWRFI 273
>gi|167466391|ref|ZP_02331095.1| hypothetical protein YpesF_00515 [Yersinia pestis FV-1]
Length = 253
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 137/307 (44%), Gaps = 77/307 (25%)
Query: 73 HGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANC 128
+G+ +W IP LCP +P R++Y+H + DLL+S +IP G + DIG GANC
Sbjct: 2 YGIEYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIP----KGKNIALLDIGVGANC 57
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLT 188
IYP++G GW F G+D+ AL A+ V NP + + ++
Sbjct: 58 IYPIIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLK---------------- 101
Query: 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248
++ +P + + GV E++D +CN
Sbjct: 102 -----------------QQKDPHA------------------IFEGVWAVNERYDATLCN 126
Query: 249 PPFFESMEEA----------------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
PPF S EEA P + GG E+ GGE F++R++ +SVA
Sbjct: 127 PPFHGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWGEGGEEGFVSRMVAESVA 186
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKII 352
Q W+TS++ +K+ L + LR V V+T E QGQ +AW+F+ P ++
Sbjct: 187 KAQNCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSRFVAWTFLTPEQQ-- 244
Query: 353 SPHVAEK 359
+ VAE+
Sbjct: 245 AAWVAER 251
>gi|406699518|gb|EKD02720.1| hypothetical protein A1Q2_02950 [Trichosporon asahii var. asahii
CBS 8904]
Length = 544
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 160/365 (43%), Gaps = 83/365 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y PDFA LA + PFV S G ID+TD A R LT LL HD L
Sbjct: 1 MHERNPYRVRKPDFAALAEKDEALRPFVTKSDHG-ASIDFTDARALRALTAALLRHDFNL 59
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ + D +LCPTV NR +Y+ DL + P ++ DIGTG +Y LL
Sbjct: 60 DIELRDDRLCPTVANRLDYVLTCLDL-AQYAAPG------PLRALDIGTGHVAVYALLLH 112
Query: 136 SLLGWSFV-GSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
L ++V GS++ +L A + N +EI+ V
Sbjct: 113 KLRPEAYVVGSELEPTSLAHAREQAARNSIAPAAVEIKGV-------------------- 152
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
P +S L+G ++D + + F +CNPPFF S
Sbjct: 153 ---------------PPDNS-----------------LLGHLKDQDSWSFTMCNPPFFAS 180
Query: 255 M---EEAGLNPKTSCGGTP----EEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
+ EEA L T P E V GGE F+ ++I++SVA W+TS+VGR
Sbjct: 181 LAEAEEARLAKATPASAAPTCAPNEQVTRGGEELFVGQMIDESVAYGDKVGWFTSLVGRY 240
Query: 308 SNLKFLISKLRKVGVTIVKTTEFV-----QGQTCRWGLAWSFVP---PARKIISP-HVAE 358
++L L+ + + KTT + QG T RW LAWSF P P P VA+
Sbjct: 241 ASLGPLVKHV------LTKTTNYAVISLRQGNTARWVLAWSFSPYRLPDVSCTDPVKVAD 294
Query: 359 KKNLS 363
++NL+
Sbjct: 295 EQNLT 299
>gi|403171455|ref|XP_003330689.2| hypothetical protein PGTG_12226 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169191|gb|EFP86270.2| hypothetical protein PGTG_12226 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 425
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 154/346 (44%), Gaps = 71/346 (20%)
Query: 16 IHPKNKYSENPPDFALL---------ASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTR 66
+HP N Y+ PPDF L +SL SF + D + D R+LT
Sbjct: 1 MHPDNLYAHQPPDFDRLIKSDPTIKRSSLLVSF----LHDSDRTSNTVFKDPEKLRQLTC 56
Query: 67 VLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGA 126
LLL D L +P +LCP +P R +Y W+ D+L +++ S G V D+GTG+
Sbjct: 57 ALLLSDFKLKLSLPPDRLCPIIPGRLDYCLWLIDVLKASV--ELSDGGAGVLVIDVGTGS 114
Query: 127 NCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
+ IYPLL LL + +++ + + A +NV N ++ I ++K S + P+I
Sbjct: 115 SAIYPLLLTQLLKNVRVIATEIDQSSYDSAMRNVTQNDLVNR-ITLQK--TSSTDPTI-- 169
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
LP + S P ++ +
Sbjct: 170 --------------------------------LPIASIS--QEPDQMISIT--------- 186
Query: 246 ICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+CNPPF+ S +E P+ C G+ EMV GGE FI +++ DS+ + R
Sbjct: 187 MCNPPFYSSQDEIDALRAKKDAPPEGVCTGSEVEMVYPGGEVGFIEKMMRDSLIIGSQTR 246
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TS+ G+ + L ++ + +G +E +QG+T RW +AWS+
Sbjct: 247 WFTSLCGKYTTLLPVVQLFKSLGGNNYAISELIQGRTRRWVIAWSW 292
>gi|67615923|ref|XP_667450.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658593|gb|EAL37225.1| hypothetical protein Chro.60237 [Cryptosporidium hominis]
Length = 348
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 171/403 (42%), Gaps = 96/403 (23%)
Query: 1 MGSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNA 60
MG + ++++ +H +N ++ + DF L+ YP + + + + RI++ A
Sbjct: 1 MGQANNKNQQKKATQLHHRNVHAND--DFLFLSERYPELKKCIKII-NNKVRINYNP-AA 56
Query: 61 TRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR-------- 112
+++VLL + + +NW IPD L PT+P+R+NY+H+I DLL+ T +
Sbjct: 57 LYCISKVLLHYRYNINWDIPDKFLIPTIPSRANYVHFISDLLTPEHFYNTEKVNDEGLRN 116
Query: 113 ---------------------NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151
G +V GFDIG GANCI+ LL + W+ +GSD+
Sbjct: 117 DLKTKTCIEGGTDVCFSELIPRGKQVLGFDIGIGANCIFSLLCNKIYSWNMIGSDI---- 172
Query: 152 LEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPS 211
SI+ ++ ++N+ + + P
Sbjct: 173 ------------------------------SIESLNVSDTIIKKNNLCSCIKLLHQERPE 202
Query: 212 SSSSFNLPAGAQSSYHGPPVLVGVVRDGE----QFDFCICNPPFFESMEEAGLN--PKTS 265
+L G++ E + F ICNPP+++S+E++ +N P
Sbjct: 203 Y------------------ILFGILDKTEIEDLKLSFTICNPPYYDSVEDSEINMHPARF 244
Query: 266 CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT-- 323
E++ GGE FI ++ +S + WYTS V + NL+FL S L K +
Sbjct: 245 RSCQNYEIITHGGESQFILKLYFESKNFPKRVIWYTSQVSKLKNLRFLKSVLGKEIINNE 304
Query: 324 --IVKTTEFVQGQTCRWGLAWSFV-PPARKIISPHVAEKKNLS 363
++ T QG+ +W +AWSF R I + KN+S
Sbjct: 305 LKSLRYTTLKQGKHDKWVIAWSFFEKEERTSILKFLRNNKNMS 347
>gi|323450807|gb|EGB06686.1| hypothetical protein AURANDRAFT_28636 [Aureococcus anophagefferens]
Length = 357
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 157/377 (41%), Gaps = 94/377 (24%)
Query: 2 GSKKRRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDG---RPRIDWTDF 58
G R RRR HP+N ++ + DF L + P V + D R +DW D
Sbjct: 24 GLAARPRRRAIVVQGHPRNAFAGSY-DFDALVASNPRLSAHVIAAADAIGRRDTVDWGDP 82
Query: 59 NATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNG 114
A EL R LL D+G+ +W +P LCP VP+R++Y+H + D+L+++ P
Sbjct: 83 RAVLELNRALLASDYGVGDWSLPPRSLCPPVPSRADYVHHVADVLATSGGLAAPPAD--- 139
Query: 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174
V G D+GTGA+ IYPLLG GW FV SD+ D A KN+ +++ + +R+
Sbjct: 140 --VVGLDVGTGASLIYPLLGHGAYGWRFVASDV-DAASCAHAKNLAERNGLADRVRVRR- 195
Query: 175 DNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234
+P+ ++ F VL G
Sbjct: 196 ----------------------------------QPNPAACFER------------VLDG 209
Query: 235 VVRDGEQFDFCICNPPFFESME----------------EAGLNP-----------KTSCG 267
V DF +CNPPF+ES + NP + G
Sbjct: 210 PV------DFTMCNPPFYESRDAFEAENARKRRQLAKASKKRNPTYVASAGNEEGSDNFG 263
Query: 268 GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327
G E+ GGER F++ +I +S + + W++S+V R+ L L L+++ V
Sbjct: 264 GGDSELWTPGGERRFVSDMIAESARFRDSCLWFSSLVSRQKLLPVLEGALKRLRVKDTTV 323
Query: 328 TEFVQGQTCRWGLAWSF 344
+GQ L WSF
Sbjct: 324 VATGRGQKTATLLFWSF 340
>gi|388858183|emb|CCF48251.1| uncharacterized protein [Ustilago hordei]
Length = 505
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 153/352 (43%), Gaps = 86/352 (24%)
Query: 22 YSENPPDFALLASLYPS-FEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIP 80
Y + PDF LA+ YP+ FV R +ID+ D A R L LL HD G+
Sbjct: 7 YRVSTPDFRALAAKYPATLGKFVKDDRGYEAKIDFQDAEAVRCLAETLLQHDFGIYATFS 66
Query: 81 DGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR----------NGDKVKGFDIGTGANCIY 130
LCPT+PNR YI I +LL+ + +PT D+++G DIGTGA+ IY
Sbjct: 67 LSNLCPTIPNRLAYISLIHELLTWS-LPTWHLLHHFQHQPPPADDRIRGLDIGTGASAIY 125
Query: 131 PLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNP----HISELIEIRKVD-NSESTPSIQ 184
P+LG A W+F +D+ +L++A+ ++ +P H+S+ + + VD N+ P Q
Sbjct: 126 PILGIACFPHWNFTATDIDPNSLDYAKNHIIDHPNNGTHLSDRVSLLHVDPNASFLPDQQ 185
Query: 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244
L +F
Sbjct: 186 TGL-----------------------------------------------------EFTM 192
Query: 245 CICNPPFFESMEEAG-------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTF 297
C NPPF+ S EE L C G+ EM+ GG+ + R+I +S+ ++
Sbjct: 193 C--NPPFYTSFEEMNRSASLKKLPANAVCHGSRSEMIVEGGQVRLVQRMIRESITTERKV 250
Query: 298 RWYTSMVGRKSNLKFLISKLR------KVGVTIVKTTEFVQGQTCRWGLAWS 343
W+T M+G+ S++ L ++L+ K+G V + G+T RW + W+
Sbjct: 251 LWWTCMLGKLSSVAQLAAELKVLSGEGKIGGWGVNELKTGGGKTKRWVIMWT 302
>gi|408389995|gb|EKJ69412.1| hypothetical protein FPSE_10402 [Fusarium pseudograminearum CS3096]
Length = 460
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 134/290 (46%), Gaps = 79/290 (27%)
Query: 63 ELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDI 122
+LT+ LL D GL +P+ +L LL ++ T ++ V G DI
Sbjct: 87 QLTKTLLKLDFGLRLELPNDRL----------------LLDTS---TYEKHAQDVVGLDI 127
Query: 123 GTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS 182
GTGA+CIYPLLG + W+F+ +D+ +LE+A KNV N ++ + I+
Sbjct: 128 GTGASCIYPLLGCTERNWNFIATDIDSKSLEYARKNVTLN-NLDQRIK------------ 174
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
V D D +DE H P +
Sbjct: 175 ---------VVDRKWTDNLIPLDE-------------------LHVPRIA---------- 196
Query: 243 DFCICNPPFF-------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
F + NPPF+ ES ++ P T+C G EM+ +GGE AF+ RI+ +S+ L+
Sbjct: 197 -FTMSNPPFYKSEQELVESAKKKSQAPFTACTGAKVEMITAGGEVAFVDRILNESLILRD 255
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+WYTSM G +S+L + KL++ + TEFVQG QT RW +AWSF
Sbjct: 256 RVQWYTSMFGFQSSLVTFVDKLKENNICNYAVTEFVQGSQTRRWAIAWSF 305
>gi|330798715|ref|XP_003287396.1| hypothetical protein DICPUDRAFT_78256 [Dictyostelium purpureum]
gi|325082601|gb|EGC36078.1| hypothetical protein DICPUDRAFT_78256 [Dictyostelium purpureum]
Length = 379
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 133/287 (46%), Gaps = 75/287 (26%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y NPP+F +LA+ YPSF F+ + IDW D NATRE TR
Sbjct: 1 MHPQNFYRYNPPNFKILANKYPSFYKFIVNKAEKIYNIDWKDPNATREFTR--------- 51
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
S + W+ + L++ I + VKG DIGTGA+ I+PLLG
Sbjct: 52 ------------SSGNSIFKDWLNEKLNNLGIDV----NNVVKGIDIGTGASSIFPLLGV 95
Query: 136 SLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
L WSF+G D+ D +L++A+KN++ N + I + K +N +E + Q
Sbjct: 96 KLFKNWSFLGLDIDDSSLKFAKKNIELNS-LESKISLFKNEN-------KEKILFNYFQ- 146
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ DEE ++ E FDFC+CNPPFF
Sbjct: 147 -------ANQDEE-----------------------------KNEEVFDFCLCNPPFFND 170
Query: 255 MEEAGLNPKTSCGGTPEEMVCSGGERAFIT--RIIEDSVALKQTFRW 299
+ E +NPK++C G+ E+V E+ +IT +I ++ T RW
Sbjct: 171 LSETNINPKSTCTGSANELVTE--EKFWITQFKIFTAELSQGNTHRW 215
>gi|403370045|gb|EJY84883.1| putative SAM-dependent methyltransferase [Oxytricha trifallax]
Length = 280
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 135/311 (43%), Gaps = 63/311 (20%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS---NIIP 108
+D+ D A ELTR +L +GL + +P L P VP R Y+ WI+ L + II
Sbjct: 8 LDFKDEKALLELTRAILYTQYGLEQYDLPKENLIPRVPQRVAYLDWIKQLFDTVEKEIIS 67
Query: 109 TTSRNG-----DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163
+ + ++ GFDIGTGAN IYP+LG F GSD+ +++WA + +
Sbjct: 68 ESMEDNLIDESRQLIGFDIGTGANLIYPILGILKYNMKFAGSDINQDSIQWATTEILN-- 125
Query: 164 HISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQ 223
+QE+ G+ L +
Sbjct: 126 ---------------KNKKLQENFIGQ-------------------------IRLQKDYE 145
Query: 224 SSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFI 283
S G ++ V E+FDF +CNPPFF EE ++ C T E GGE F+
Sbjct: 146 SVLEG---VISVNEIDEKFDFTMCNPPFFNHEEERTFRHQSVCPITKSEDSTIGGEIRFL 202
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFL---ISKLRKVGV------TIVKTTEFVQGQ 334
++S+ K +W+TS++G+K+ +F+ I + K ++ + E +GQ
Sbjct: 203 CEYAQESLKFKNQVKWFTSLIGKKTTYEFIKNYIVNMLKFDSGEEEYDILIASGEIEEGQ 262
Query: 335 TCRWGLAWSFV 345
T RW + W F+
Sbjct: 263 TKRWLIGWRFI 273
>gi|401887781|gb|EJT51759.1| hypothetical protein A1Q1_06990 [Trichosporon asahii var. asahii
CBS 2479]
Length = 545
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 160/367 (43%), Gaps = 87/367 (23%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y PDFA LA + PFV S G ID+TD A R LT LL HD L
Sbjct: 1 MHERNPYRVRKPDFAALAEKDEALRPFVTKSDHGA-SIDFTDARALRALTAALLRHDFNL 59
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ + D +LCPTV NR +Y+ D L+ P ++ DIGTG +Y LL
Sbjct: 60 DIELRDDRLCPTVANRLDYVLTCLD-LAQYAAPG------PLRALDIGTGHVAVYALLLH 112
Query: 136 SLLGWSF-VGSDMTDVALEWAEKNVKSNPHISELIEIRKV--DNSESTPSIQESLTGKSV 192
L ++ VGS++ +L A + N +EI+ V DNS
Sbjct: 113 KLRPEAYVVGSELEPTSLAHAREQAARNSIAPAAVEIKGVPPDNS--------------- 157
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ GH+ +D + + F +CNPPFF
Sbjct: 158 -------LLGHL--------------------------------KDQDSWSFTMCNPPFF 178
Query: 253 ESM---EEAGLNPKTSCGG----TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
S+ EEA L T P E V GGE F+ ++I++SVA W+TS+VG
Sbjct: 179 ASLAEAEEARLAKATPASAAPTCAPNEQVTRGGEELFVGQMIDESVAYGDKVGWFTSLVG 238
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFV-----QGQTCRWGLAWSFVP---PARKIISP-HV 356
R ++L L+ + + KTT + QG T RW LAWSF P P P V
Sbjct: 239 RYASLGPLVKHV------LTKTTNYAVISLRQGNTARWVLAWSFSPYRLPDVSCTDPVKV 292
Query: 357 AEKKNLS 363
A+++NL+
Sbjct: 293 ADEQNLT 299
>gi|330924422|ref|XP_003300634.1| hypothetical protein PTT_11931 [Pyrenophora teres f. teres 0-1]
gi|311325134|gb|EFQ91267.1| hypothetical protein PTT_11931 [Pyrenophora teres f. teres 0-1]
Length = 428
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 154/343 (44%), Gaps = 76/343 (22%)
Query: 21 KYSENPP----DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLN 76
+ ++ PP DF LA +F+ + R ++D+ D + L++ +L D GL
Sbjct: 2 QLAQRPPYETVDFEALAKSDKNFKQL--WQRTS-GKLDFQDPETIQTLSKAILKVDFGLE 58
Query: 77 WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD---KVKGFDIGTGANCIYPLL 133
+P +LCP +PNR NY+ W++ L+ S P + N D +++G DIGTGA+ IY LL
Sbjct: 59 LDVPGDRLCPPIPNRWNYVAWLQGLIDST-SPDYASNYDPNRQIRGLDIGTGASAIYTLL 117
Query: 134 -GASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
S L WS +D+ + E A +N+ N + + + + +E P I
Sbjct: 118 CSKSRLNWSMCATDIDKKSFESAARNLALN---NLMTRTKLLQTTELNPLI--------- 165
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
P +GV ++ DF ICNPPFF
Sbjct: 166 ------------------------------------PLTALGV----DRLDFTICNPPFF 185
Query: 253 ESM---------EEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303
+ E P C G+ EMV GG+ F+T+++ +S+ L++ +WYTS+
Sbjct: 186 TDVADMHSSLKGEGKSWKPNAVCTGSENEMVYPGGDVGFVTKMVNESLMLREKVQWYTSL 245
Query: 304 VGRKSNLKFLISKLRKVGVT--IVKTTEFVQGQTCRWGLAWSF 344
G+ + K +I L+ G+ V E V T RW +AWSF
Sbjct: 246 FGKLESAKAIIRLLKNHGINNWAVGVVE-VGSSTKRWIVAWSF 287
>gi|343497202|ref|ZP_08735278.1| 23S rRNA mA1618 methyltransferase [Vibrio nigripulchritudo ATCC
27043]
gi|342819669|gb|EGU54508.1| 23S rRNA mA1618 methyltransferase [Vibrio nigripulchritudo ATCC
27043]
Length = 333
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 150/341 (43%), Gaps = 81/341 (23%)
Query: 29 FALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPT 87
F L P + FV + G I+++D A L R LL + + W IP G LCP
Sbjct: 38 FPSLCKASPELQKFVIKTVKGDESINFSDEQAVIALNRALLAKHYSVTKWDIPKGFLCPP 97
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147
+P R++YIH I DLL + +P +V G DIGTGAN +YP++G S W +D+
Sbjct: 98 LPGRADYIHHISDLLIN--VPKEY----EVTGLDIGTGANGVYPIVGISQYNWLMRATDI 151
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
+P + ++K+ +++ PS++ +L+ ++ +
Sbjct: 152 --------------DP--KSVANVKKI--ADNNPSLKSNLS---------------VELQ 178
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA--------- 258
++P +++ E+ DF +CNPPF +S++EA
Sbjct: 179 SDPKC------------------YFRNILKTDERVDFTMCNPPFHKSLQEAAKGTERKLK 220
Query: 259 ---------GLNPKTSC-----GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304
G PK++ GG E+ C GGE FI + +S + W+T++V
Sbjct: 221 NLSQNRAKKGSEPKSTASKLNFGGQKAELWCPGGEEKFIRNMAFESKHFAKQCLWFTTLV 280
Query: 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+K N++ L L K+ V+ E GQ +AW+F+
Sbjct: 281 SKKDNVRPLRKALEKLEAHEVRIVEMTHGQKITRFVAWTFL 321
>gi|121711573|ref|XP_001273402.1| DUF890 domain protein [Aspergillus clavatus NRRL 1]
gi|119401553|gb|EAW11976.1| DUF890 domain protein [Aspergillus clavatus NRRL 1]
Length = 436
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 153/336 (45%), Gaps = 75/336 (22%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF LA P F ++ G ++D++D +A R+LT+ LL D L IP+ +LCP
Sbjct: 13 DFTTLALQSPDFAKYL----KGNGQLDFSDPDAVRQLTKSLLQRDFNLKVTIPENRLCPP 68
Query: 88 VPN-------RSNYIHWIEDLLSSNIIPTTSRNGDK----------VKGFDIGTGANCIY 130
V R NYI W++DLL + GD+ V G DIGTG IY
Sbjct: 69 VCTLTNSRYIRLNYILWLQDLLDT--------TGDEYRDDYDPDRNVLGLDIGTGCCSIY 120
Query: 131 PLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTG 189
PLLG A+ W+++ +D+ D + A +NV +N S + I+ + P L
Sbjct: 121 PLLGCATRPKWNYLATDVDDDNIRTARENVSANGLESRIQVIKTNPDDGLIP-----LAT 175
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
K + + M P +S + A A++ P
Sbjct: 176 KFEVESLDFTMCN------PPFYASRDEMIASAEAKER---------------------P 208
Query: 250 PFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN 309
PF ++C G EMV GGE AF++ +IE+S+ L+ WYTSM+G+ S+
Sbjct: 209 PF------------STCTGAEVEMVTEGGEIAFVSGMIEESLKLRDRVIWYTSMLGKLSS 256
Query: 310 LKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+ ++ KL G TEFVQG +T RW +AWS+
Sbjct: 257 VSAIVEKLMTHGNRNYAVTEFVQGSKTKRWAVAWSW 292
>gi|389873466|ref|YP_006380885.1| 23S rRNA mA1618 methyltransferase [Advenella kashmirensis WT001]
gi|388538715|gb|AFK63903.1| 23S rRNA mA1618 methyltransferase [Advenella kashmirensis WT001]
Length = 246
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 75/280 (26%)
Query: 86 PTVPNRSNYIHWIEDLLS---SNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSF 142
P +P R +Y+H + DLL+ + +IP G V DIGTGA+ IYP++G GW F
Sbjct: 2 PPIPGRGDYVHHLADLLAERNAGVIP----RGPAVHVLDIGTGASAIYPIIGHFDYGWRF 57
Query: 143 VGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSG 202
GSD+ A++ A+ +++NP +S+ E+R+ + +P+
Sbjct: 58 TGSDIDPGAVKSAQAIIQANPALSDAAEVRR----QKSPA-------------------- 93
Query: 203 HMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLN- 261
+ G+V ++FD +CNPPF+ S EEA N
Sbjct: 94 ---------------------------HIFKGLVGVNDRFDLTLCNPPFYSSSEEAANNS 126
Query: 262 ----------------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
P + GG E+ C GGE FI R+ E+S +++ W++++V
Sbjct: 127 ERKWRGLGRAGARHKRPLLNFGGRDTELWCEGGEALFINRMAEESTTVQKQVLWFSTLVS 186
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
++SNL + ++ G V+T + QGQ +AW+F+
Sbjct: 187 KESNLPEVYRSIKNAGALDVRTVDMAQGQKKSRFVAWTFL 226
>gi|332532913|ref|ZP_08408785.1| RNA large subunit methyltransferase F [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037579|gb|EGI74031.1| RNA large subunit methyltransferase F [Pseudoalteromonas
haloplanktis ANT/505]
Length = 310
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 159/341 (46%), Gaps = 50/341 (14%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N + +N DF LL + +P+ PFV + G ID++D A + L +
Sbjct: 2 KENKARSKLHPRNLH-KNGYDFDLLTTEHPALLPFVITTPAGTKSIDFSDNKAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +++W IP+ LCP +P R +YIH++ DLLS + IP G ++K DIG
Sbjct: 61 LLKAHYNIDFWDIPEHNLCPPIPGRVDYIHYLADLLSDDNQQQIPL----GKQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGAN +YPL G S W F G+D+ +++ A++ + N I +++ N+
Sbjct: 117 TGANLVYPLTGTSEYKWHFTGTDIDAASVKIAKQIAQFN---GLKITLKQQKNA------ 167
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
S K V ++ ++ H+ P +S G++ +
Sbjct: 168 --SHIFKGVVNQKDL---YHLTLCNPPFHASEEEASKGSERKWRN--------------- 207
Query: 244 FCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303
+ P ++ G N + C G GE FI+ +I++S + W+TS+
Sbjct: 208 --LGKTP-SSTLNFGGHNNELWCEG---------GEVQFISNMIKESEDFAEQVLWFTSL 255
Query: 304 VGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
V +K N+ L L+ + K + QGQ +AWS+
Sbjct: 256 VSKKDNIAALEEVLKAHPIAQYKIVDMAQGQKISRFIAWSY 296
>gi|50550363|ref|XP_502654.1| YALI0D10329p [Yarrowia lipolytica]
gi|49648522|emb|CAG80842.1| YALI0D10329p [Yarrowia lipolytica CLIB122]
Length = 393
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 135/301 (44%), Gaps = 67/301 (22%)
Query: 54 DWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN 113
D++ A E T+ LL D+GL + +LCP VP R Y+ WI +L+ + P T
Sbjct: 60 DFSTAEANCEFTKASLLRDYGLKVELDPARLCPRVPIRVAYVEWIGELIPETLEPKT--- 116
Query: 114 GDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173
V G D+GTG +CIYPLL A + GW+ +GSD+ D A E A+KN++ NP I +LI ++
Sbjct: 117 ---VTGLDVGTGTSCIYPLLAAKIYGWNMIGSDIDDKAAETAQKNIERNPEIEKLITVKH 173
Query: 174 VDNSE---STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPP 230
V P+I ++ EE E S S+ + PAG +
Sbjct: 174 VSPQRDFFDFPNITFTMCNPPFYASF---------EEMETSLSNKTSRPAGELKAAQTEL 224
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDS 290
+ G GE F+ R+I DS
Sbjct: 225 ITTG-------------------------------------------GELGFLQRMIGDS 241
Query: 291 VALKQTFRWYTSMVGRKSNLKFLISKLRKVGV--TIVKTTEFVQGQTCRWGLAWSFVPPA 348
K W+TSMVG+K ++ + ++L++ + T+V G+T RW +AW+F P A
Sbjct: 242 KRHKDIL-WFTSMVGKKDTMEKVCAQLKEEEIYHTVVSRR---PGKTKRWFIAWTFTPTA 297
Query: 349 R 349
+
Sbjct: 298 K 298
>gi|403346818|gb|EJY72816.1| putative SAM-dependent methyltransferase [Oxytricha trifallax]
Length = 280
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 133/311 (42%), Gaps = 63/311 (20%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSS-----NI 106
+D+ D A ELTR +L +GL ++ +P L P VP R Y+ WI+ L +
Sbjct: 8 LDFKDEKALLELTRAILYTQYGLEYYDLPKENLIPRVPQRVAYLDWIKQLFDTVEKEIIS 67
Query: 107 IPTTSRNGDKVK---GFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163
N D+ + GFDIGTGAN IYP+LG F GSD+ ++ WA + +
Sbjct: 68 ESMEEENVDESRQLIGFDIGTGANLIYPILGILKYNMQFAGSDINPDSIHWATTEILN-- 125
Query: 164 HISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQ 223
+Q++ G+ L +
Sbjct: 126 ---------------KNKKLQQNFIGQ-------------------------IRLQKDYE 145
Query: 224 SSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFI 283
S G ++ V E+FDF +CNPPFF EE ++ C T E GGE F+
Sbjct: 146 SVLEG---VISVNEIDEKFDFTMCNPPFFNHEEERTFRHQSVCPITKSEDSTIGGEIRFL 202
Query: 284 TRIIEDSVALKQTFRWYTSMVGRKSNLKFL---ISKLRKVGV------TIVKTTEFVQGQ 334
++S+ K +W+TS++G+K+ +F+ I + K ++ + E +GQ
Sbjct: 203 CEYAQESLKFKNQVKWFTSLIGKKTTYEFIKNYIVNMLKFDSGEEEYDILIASGEIEEGQ 262
Query: 335 TCRWGLAWSFV 345
T RW + W F+
Sbjct: 263 TKRWLIGWRFI 273
>gi|390953125|ref|YP_006416883.1| putative SAM-dependent methyltransferase [Aequorivita sublithincola
DSM 14238]
gi|390419111|gb|AFL79868.1| putative SAM-dependent methyltransferase [Aequorivita sublithincola
DSM 14238]
Length = 281
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 77/343 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HPKN ++++ +F L + +P + FVF + G + + + A + L LL +G+
Sbjct: 1 MHPKNPFNKDY-NFDNLIAAHPPLKTFVFENEHGNKTVKFANHEAVKALNTALLRAHYGI 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+ LCP +P R +Y+ I DL N ++ D+GTGAN IYP+L
Sbjct: 60 TYWNIPEDNLCPPIPGRLDYLLHIADLT----------NKTEIHLLDVGTGANLIYPILA 109
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
W +++ +L A++ + NP + + IE+R
Sbjct: 110 NRHFNWKCTATEVNLDSLSNAKEIIDKNPDLKD-IELR---------------------- 146
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ H+ L +++ + F+ +CNPPFF++
Sbjct: 147 --HQQFKSHI---------------------------LEHIIQPTDVFNVVVCNPPFFKN 177
Query: 255 MEEAGLNPK-------------TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
+A + + + GG E+ GGE AFI ++ E+SV K +W+T
Sbjct: 178 RTDAEQSNRRKFKNLELSEESTKNFGGLSNELWYKGGEVAFIQKMAEESVQFKDQAQWFT 237
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++V + NLK L + K T V+ E QG +AW+F
Sbjct: 238 AIVSQNDNLKKLKRAINKTKPTEVRIVEMEQGNKQSRFIAWTF 280
>gi|451848955|gb|EMD62259.1| hypothetical protein COCSADRAFT_38221 [Cochliobolus sativus ND90Pr]
Length = 436
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 139/308 (45%), Gaps = 68/308 (22%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
++D+ D + + L++ +L D GL +PD +LCP +PNR NY+ WI+ L+ S P S
Sbjct: 34 KLDFQDPHTVQALSKAILKSDFGLELDVPDDRLCPPIPNRWNYVAWIQGLVDSTS-PDYS 92
Query: 112 RNGD---KVKGFDIGTGANCIYPLLGA-SLLGWSFVGSDMTDVALEWAEKNVKSNPHISE 167
D V+G DIGTGA+ IY +L S WS +D+ + + A +N+ N H+
Sbjct: 93 NKYDPNRHVQGLDIGTGASAIYTMLCLRSRPNWSMCATDIDKKSFDSAARNLALN-HL-- 149
Query: 168 LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYH 227
+ + + + TP I P A H
Sbjct: 150 MTRTKLLQTTALTPLI-----------------------------------PLAALGLTH 174
Query: 228 GPPVLVGVVRDGEQFDFCICNPPFFESMEE-----AG----LNPKTSCGGTPEEMVCSGG 278
DF ICNPPFF + E AG P C G+ EMV GG
Sbjct: 175 --------------LDFTICNPPFFATPSEMRSSLAGEGKSSKPNAICTGSENEMVSPGG 220
Query: 279 ERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT--IVKTTEFVQGQTC 336
+ F+T ++ +S+ L++ +WY+S+ G+ + K +I L++ G+T V E T
Sbjct: 221 DVGFVTALVNESLVLREKVQWYSSLFGKMDSAKAIIRLLKQHGITNWAVGVIEAGASGTK 280
Query: 337 RWGLAWSF 344
RW +AWSF
Sbjct: 281 RWIVAWSF 288
>gi|307205545|gb|EFN83850.1| Putative methyltransferase METT10D [Harpegnathos saltator]
Length = 443
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 81/316 (25%)
Query: 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152
NYI WIEDL+ + D+ G DIGTGA C+Y LL A + +G+++ ++
Sbjct: 2 NYILWIEDLMRHFKLTM-----DETIGIDIGTGAICVYALLLAKIYKCHMIGTEVDQESV 56
Query: 153 EWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSS 212
E A+ ++ N ++ +LI+I V NSES
Sbjct: 57 EHAKNCIRRN-NLQDLIKIITV-NSES--------------------------------- 81
Query: 213 SSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES-----MEEAGLNPKTSCG 267
+ V + + +DF +CNPPFFE+ L P+ +
Sbjct: 82 ------------------IFKDAVEENKVYDFSMCNPPFFENEGNDERVAKTLPPRNAPS 123
Query: 268 GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327
G E+ GGE +F+TR+IE+S+ LK + Y++M+G+K +L L+ +R +
Sbjct: 124 GNEGELKTKGGELSFVTRMIEESIELKDQIKIYSTMIGKKIDLLRLMKMIRSKNIENATW 183
Query: 328 TEFVQGQTCRWGLAWSFVP-------------PARKIISPHVAEKKNLSFMLEGVQRQFS 374
TEF QG T RW LAWSF+P RK +P + + K L + V+ +FS
Sbjct: 184 TEFCQGYTTRWALAWSFLPKDVMDLTTAPFIRKTRKSTAPLIRDHKTL--ITFPVKDEFS 241
Query: 375 ALDVLQSIETFFSASG 390
++D + +F S +
Sbjct: 242 SMD---DVISFLSTTA 254
>gi|442609343|ref|ZP_21024082.1| Ribosomal RNA large subunit methyltransferase F [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441749387|emb|CCQ10144.1| Ribosomal RNA large subunit methyltransferase F [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 297
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 152/339 (44%), Gaps = 54/339 (15%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
+ R +H +N + + DF L + +P+ + ++ G+ ID+ D NA L + LL
Sbjct: 6 DRRSLVHQRNIHQQGY-DFNRLITAHPALSNHIVITQGGKKSIDFADPNAVIILNQALLK 64
Query: 71 HDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCI 129
+G+++W +P LCP +P R +YIH + + L + I PT N VKG DIGTGA+ I
Sbjct: 65 CHYGVDFWTVPSPFLCPPIPGRVDYIHHLAEFLEAQI-PTLDHNS--VKGLDIGTGASAI 121
Query: 130 YPLLGASLLGWSFVGSDMTDVAL----EWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
YP+LG W+FVGSD+ A+ +WAE N Q
Sbjct: 122 YPILGHKCYRWNFVGSDINKDAIKLAKQWAEFN-------------------------QL 156
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
L + +Q +S++ + +P+ S +F L +H R G + +
Sbjct: 157 PLKFR-LQSKSDL----MFENIIKPNESFTFTL---CNPPFHASE---QEARQGTERKWR 205
Query: 246 ICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVG 305
+++ G P+ C GGE AFI +IE S A W+TS+V
Sbjct: 206 NLKGKVSKNLNFGGHAPELWC---------QGGELAFIRSMIEQSQAFSHQVTWFTSLVS 256
Query: 306 RKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ NLK L+ K GV E VQG +AW++
Sbjct: 257 KSENLKPLVQFAHKCGVNAWHVVEMVQGNKQSRFVAWNW 295
>gi|372209304|ref|ZP_09497106.1| 23S rRNA mA1618 methyltransferase [Flavobacteriaceae bacterium S85]
Length = 281
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 149/343 (43%), Gaps = 76/343 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N + +N DF L + + + +VF + G I + D +A +EL + LL + L
Sbjct: 1 MHPNNPF-QNNYDFDKLTRVNSALQKYVFVNAYGNQTIKFADKDAVKELNKALLQLYYYL 59
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
++W +P LCP +P R +Y+ + DLL N + DIGTGAN IYP+LG
Sbjct: 60 DYWDLPKQNLCPPIPGRLDYLLHVADLLD---------NKKDIHLLDIGTGANLIYPILG 110
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
W S++ + ++ A+ VK+NP ++ I IR
Sbjct: 111 TCHFNWLCTASEVDNESINNAKDIVKNNPLLTT-ITIR---------------------- 147
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
P ++S +L +++ + FD +CNPPFF++
Sbjct: 148 ------------------------PQRFKNS-----ILENIIQPNDYFDVVVCNPPFFKN 178
Query: 255 MEEAGL-------------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYT 301
+A + GGT E+ C GGE F+ ++ E+SV K W+T
Sbjct: 179 SFDAAQKNNQKNKNLKLTEKENLNFGGTSNELWCKGGEETFVKKMAEESVLFKTQVGWFT 238
Query: 302 SMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S+V +K +LK + + K T VK + QG +AW +
Sbjct: 239 SLVSQKEHLKNIKRAINKTNPTEVKIVDMQQGNKQSRFVAWRY 281
>gi|336366473|gb|EGN94820.1| hypothetical protein SERLA73DRAFT_171215 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379164|gb|EGO20320.1| hypothetical protein SERLADRAFT_452997 [Serpula lacrymans var.
lacrymans S7.9]
Length = 211
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 61/247 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y + PP FA LA YP P++ + DG ID+ + A R LT LL D G+
Sbjct: 1 MHARNPYRD-PPRFAELAKAYPPLSPYIIRNPDGTSTIDFKNDKAQRCLTEALLHRDFGI 59
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+P +LCP +PNR NY+ WI+D++ S T ++ + ++G DIGTGA+ IYPLL
Sbjct: 60 KLNLPSDRLCPPIPNRLNYVLWIQDIIRS----TYGQHTNTIRGIDIGTGASAIYPLLAC 115
Query: 136 SL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+L W F +++ + + +A++NV +N +QD
Sbjct: 116 TLEPSWCFAATEIDETSFNYAQQNVTNN----------------------------DLQD 147
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR---DGEQFDFCICNPPF 251
++ +S H++ P+L ++ D Q+ F +CNPPF
Sbjct: 148 RIHI-ISAHLNA-----------------------PILTPLINCYDDDNQYHFTMCNPPF 183
Query: 252 FESMEEA 258
+ S E+
Sbjct: 184 YNSAEDV 190
>gi|343506122|ref|ZP_08743637.1| putative SAM-dependent methyltransferase [Vibrio ichthyoenteri ATCC
700023]
gi|342804226|gb|EGU39556.1| putative SAM-dependent methyltransferase [Vibrio ichthyoenteri ATCC
700023]
Length = 378
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 148/332 (44%), Gaps = 30/332 (9%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N + + DF L P +V + G I + D + + L R LL + +
Sbjct: 59 LHKRNVH-QGRYDFERLVKALPELAKYVVKNPVGEATIRFDDPMSVKLLNRALLAEHYSV 117
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
W IP+G LCP +P R++YIH + DLLSS N ++ DIG GANCIYP++G
Sbjct: 118 TQWDIPEGYLCPPIPGRADYIHRLADLLSSE---APKINHKLIRALDIGVGANCIYPIVG 174
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
A+ GW VGSD+ V++E + + N + +E R S+S Q + D
Sbjct: 175 ATQYGWHCVGSDVDVVSVENSNRIATENTVLVGKVECRL--QSDSAHFFQGIIQPGEYYD 232
Query: 195 ESNMDMSGHMD-EEAEPSSSSSF-NLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+ + H EEA+ + NL A + P N P
Sbjct: 233 VTTCNPPFHSSLEEAQKGTERKIANLNAHKAKRGNMVP-----------------NKPKL 275
Query: 253 ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKF 312
+ LN GG E+ C GGE +F+ + +S W+T+++ +K N+++
Sbjct: 276 TLEKSTTLN----FGGQKAELWCPGGEASFVKNLAFESEKFAMQVLWFTTLISKKENVRW 331
Query: 313 LISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
L L KVG V E QGQ +AWSF
Sbjct: 332 LCKNLEKVGAKQVTIVEMSQGQKISRFVAWSF 363
>gi|451993434|gb|EMD85907.1| hypothetical protein COCHEDRAFT_1228540 [Cochliobolus
heterostrophus C5]
Length = 436
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 139/307 (45%), Gaps = 66/307 (21%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
++D+ D + + L++ +L D GL +P+ +LCP +PNR NY+ WI+ L+ S ++
Sbjct: 34 KLDFQDPHTVQALSKAILKSDFGLELDVPNDRLCPPIPNRWNYVAWIQGLVDSTSPDYSN 93
Query: 112 RN--GDKVKGFDIGTGANCIYPLLGA-SLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168
+ G V+G DIG GA+ IY +L S WS +D+ + + A +N+ N + +
Sbjct: 94 KYDPGRHVQGLDIGAGASAIYTMLCLRSRPNWSMCATDIDKKSFDSAARNLALN---NLM 150
Query: 169 IEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228
+ + + TP I
Sbjct: 151 TRTKLLQTTALTPII--------------------------------------------- 165
Query: 229 PPVLVGVVRDGEQFDFCICNPPFFESMEE-----AG----LNPKTSCGGTPEEMVCSGGE 279
P +G+ DF ICNPPFF + E AG P C G+ EMV GG+
Sbjct: 166 PLTALGIA----HLDFTICNPPFFATPSEMRSSLAGEGKSSKPNAICTGSENEMVSPGGD 221
Query: 280 RAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT--IVKTTEFVQGQTCR 337
F+T I+ +S+ L++ +WY+S+ G+ + K +I L++ G+T V E T R
Sbjct: 222 VGFVTAIVNESLVLREKVQWYSSLFGKMDSAKAIIRLLKQHGITNWAVGVIEAGASGTKR 281
Query: 338 WGLAWSF 344
W +AWSF
Sbjct: 282 WIVAWSF 288
>gi|392576511|gb|EIW69642.1| hypothetical protein TREMEDRAFT_30662 [Tremella mesenterica DSM
1558]
Length = 448
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 152/337 (45%), Gaps = 68/337 (20%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP N+Y +PPDF+ LA YP + +V + G ID+ D + R LT LL +D
Sbjct: 1 MHPLNRY-RHPPDFSSLAKSYPPLKQYVQNTDHGSI-IDFHDSASLRTLTEALLHNDWQY 58
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
I +LCPT+ NR +Y+ I +L +P T + ++ DIGTG IYPLL
Sbjct: 59 VISIRKDRLCPTIANRLDYLLRILEL--ERYLPLT--HPGPLRVVDIGTGHVAIYPLLLH 114
Query: 136 SLLGWSFV-GSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
L + + G+++ V+ E H SE + +++ S +++
Sbjct: 115 RLRPQAKIYGTEIDSVSFE----------HASETLRKNEIEGS----------VKLMLRN 154
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
E +M + ++E E DF ICNPPFF S
Sbjct: 155 EKDMILP--LNEIGE--------------------------------VDFMICNPPFFGS 180
Query: 255 MEEA--GLNPKTS-----CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307
M E G K S G E++ GGE F+ R+I++S+ + WYTS++G+
Sbjct: 181 MNEMEEGQAMKKSGAYGAATGAQVELITPGGEVEFVRRMIDESLQFGEKCSWYTSLIGKY 240
Query: 308 SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
S+L L++ LR G T F T RW LAWS+
Sbjct: 241 SSLSPLVNHLRSQGCTNYLVQSFKPSHTVRWILAWSY 277
>gi|340620590|ref|YP_004739043.1| hypothetical protein zobellia_4629 [Zobellia galactanivorans]
gi|339735387|emb|CAZ98764.1| Conserved hypothetical protein [Zobellia galactanivorans]
Length = 218
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 60/255 (23%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
++ +E+ +H +NK E D L ++ P + F+ ++ G ID+++ A + L +
Sbjct: 5 KKPKEKARLHVRNKNRERY-DLEALKTVQPELKGFIKPNKFGVESIDFSNPRAVKLLNKA 63
Query: 68 LLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN---GDKVKGFDIG 123
LL H +G+ NW PD LCP +P R++YIH I D+L T + N G+K+ +IG
Sbjct: 64 LLNHYYGIENWEFPDENLCPPIPGRADYIHHIADVLGD----TNAGNVPSGNKITCLEIG 119
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
GA+CIYP++G + GW+F+GSD+ ++ A+ V SNP + IE R
Sbjct: 120 VGASCIYPIIGVTEYGWNFIGSDIDPKSIVSAKHIVNSNPSLKGKIECR----------- 168
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFD 243
KS +D + G++ E+ D
Sbjct: 169 ----LQKSARD------------------------------------IFRGILSPDEKID 188
Query: 244 FCICNPPFFESMEEA 258
ICNPPF SMEEA
Sbjct: 189 LVICNPPFHSSMEEA 203
>gi|419957744|ref|ZP_14473810.1| 23S rRNA mA1618 methyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607902|gb|EIM37106.1| 23S rRNA mA1618 methyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
Length = 224
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 118/274 (43%), Gaps = 73/274 (26%)
Query: 88 VPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVG 144
+P R++Y+H + DLL+ + ++P + DIGTGAN IYPL+GA W F G
Sbjct: 1 MPGRADYVHHLADLLADDNGGVVPK------QATVLDIGTGANLIYPLIGAHEYQWRFTG 54
Query: 145 SDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHM 204
S++ A A+ + +NP +S + +R+
Sbjct: 55 SEIGAEAFASAQAIINANPGLSRAVRLRR------------------------------- 83
Query: 205 DEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA------ 258
+ +++ FN G++ EQ+D +CNPPF +S A
Sbjct: 84 ----QKDAAAIFN----------------GIIHKNEQYDATLCNPPFHDSAASARAGSER 123
Query: 259 -------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
+ + GG +E+ C GGE AFI R+I +S + +W+T++V R NL
Sbjct: 124 KRRNLGQAEDGALNFGGQQQELWCEGGEVAFILRMIAESKGFGRQVKWFTTLVSRGDNLP 183
Query: 312 FLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
L L VG V E QGQ +AWSF+
Sbjct: 184 PLYRALTDVGAVKVVKKEMAQGQKQSRFIAWSFM 217
>gi|417340310|ref|ZP_12121659.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|417347802|ref|ZP_12126913.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|417454995|ref|ZP_12163433.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|417517060|ref|ZP_12179798.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|353577301|gb|EHC39507.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353635029|gb|EHC81458.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353652540|gb|EHC94340.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|357959288|gb|EHJ83583.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 198
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 57/248 (22%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA 258
F +S A
Sbjct: 188 FHDSAAAA 195
>gi|417371953|ref|ZP_12142373.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|417509487|ref|ZP_12174663.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353606645|gb|EHC60819.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353649168|gb|EHC91867.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 197
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 57/248 (22%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA 258
F +S A
Sbjct: 188 FHDSAAAA 195
>gi|417356657|ref|ZP_12132155.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|417527954|ref|ZP_12184966.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
gi|353595556|gb|EHC52787.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353668315|gb|EHD05535.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
Length = 196
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 57/248 (22%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFESMEEA 258
F +S A
Sbjct: 188 FHDSAAAA 195
>gi|406885104|gb|EKD32380.1| Ribosomal RNA large subunit methyltransferase F, partial
[uncultured bacterium]
Length = 197
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 114/248 (45%), Gaps = 62/248 (25%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H KNK+ DF +L P + +V + ID+ D A + L + LL H +G+
Sbjct: 5 LHRKNKH-HGRYDFDILIKSTPELDKYVVTNMYDDRTIDFFDPAAVKMLNKALLKHFYGI 63
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG----FDIGTGANCIY 130
+W IP+ LCP +P R++YIH I DLL + +G+ +K DIG GANCIY
Sbjct: 64 AFWDIPENYLCPPIPGRADYIHNIADLLEED-----KHSGNHLKTSITCLDIGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GWSF+GSD+ VA+E A+K V+ NP + IE+R
Sbjct: 119 PLIGCVEYGWSFIGSDIDPVAIESAKKIVQKNPQLKCKIELR------------------ 160
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+Q +S G + E+ EQ D ICNPP
Sbjct: 161 -LQKDSTHFFRGILGED--------------------------------EQIDITICNPP 187
Query: 251 FFESMEEA 258
F S EEA
Sbjct: 188 FHSSPEEA 195
>gi|269968705|ref|ZP_06182699.1| hypothetical protein VMC_41290 [Vibrio alginolyticus 40B]
gi|269826688|gb|EEZ81028.1| hypothetical protein VMC_41290 [Vibrio alginolyticus 40B]
Length = 278
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 54/234 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCP 86
DF L P +PFV + G I+++D NA + L + LL +G+ +W IPD LCP
Sbjct: 70 DFKKLVESEPQLKPFVIKNPKGEDSINFSDPNAVKMLNKALLAAYYGIEFWDIPDTYLCP 129
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
+P R++YIH + +LL + + KVK DIG GANCIYP++G + GW + GSD
Sbjct: 130 PIPGRADYIHRVAELLDGEVKGQYTHQ--KVKALDIGVGANCIYPIVGVTKYGWHYTGSD 187
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
+ +++ A+ V+ N LTGK + + D +
Sbjct: 188 VDPKSIQSAQTIVEHN----------------------RVLTGKIALIQQHNDAN----- 220
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL 260
V G+++ +++D CNPPF S E+A +
Sbjct: 221 ------------------------VYRGIIQPNDRYDVTTCNPPFHRSAEDAAM 250
>gi|405119135|gb|AFR93908.1| hypothetical protein CNAG_02784 [Cryptococcus neoformans var.
grubii H99]
Length = 480
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 143/343 (41%), Gaps = 76/343 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H N Y + PDFA LAS YP F PFV S DG P I++ D A RELT+ LL D GL
Sbjct: 1 MHQNNPYLKQKPDFARLASRYPKFAPFVNVSEDGYPSINFQDPTALRELTKCLLKEDWGL 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ DL + PT I + IY +L
Sbjct: 61 D----------------------VDLREDRLCPT------------IPNRLDYIYHVLDL 86
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHI--SELIEIRKVDNSESTPSIQESLTGKSVQ 193
PH+ S L +R +D +I L + ++
Sbjct: 87 E--------------------------PHLPSSSLRPLRILDIGTGATAIYPILLSR-LR 119
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP---PVLVGVVR---DGEQFDFCIC 247
+S + +G ++ N+P + + + P P+L ++ E +DF IC
Sbjct: 120 PDSRIVATGGFSYNHAKATLEKNNIPPSSITILNSPTPDPILFPLLECKGKSEDWDFTIC 179
Query: 248 NPPFFES-------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
NPPFF S ME+ P + + E++ GGE AFIT +I +S+ + Q WY
Sbjct: 180 NPPFFASSQEMLQGMEQKDRQPHAAPTASDNELITRGGELAFITSMIRESIDIGQRCTWY 239
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
T++VG+ S+L+ L+ L + + Q +T RW L WS
Sbjct: 240 TTLVGKYSSLQPLVETLGEFKIDNYFVINIKQSRTSRWILGWS 282
>gi|417412699|ref|ZP_12158269.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
gi|353626223|gb|EHC74816.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
Length = 207
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 57/244 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFES 254
F +S
Sbjct: 188 FHDS 191
>gi|417325211|ref|ZP_12111243.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
gi|353576746|gb|EHC39120.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Adelaide str. A4-669]
Length = 205
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 57/244 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHQHRY-DLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFES 254
F +S
Sbjct: 188 FHDS 191
>gi|226286889|gb|EEH42402.1| DUF890 domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 396
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 141/341 (41%), Gaps = 117/341 (34%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
+N Y +N DFA LA YP F A ++LT+ LL D GLN
Sbjct: 5 RNIY-KNDVDFAALALQYPDF--------------------AKQQLTKSLLKRDFGLNVD 43
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL 138
+PD +LCP R Y G DIGTGA+CIYPLLG +L
Sbjct: 44 LPDDRLCPA--ERVVY------------------------GLDIGTGASCIYPLLGCALR 77
Query: 139 -GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESN 197
W F +D+ L++A NVK N S I ++ + S P I QD
Sbjct: 78 PRWRFAATDIDSKNLKYARDNVKKNELDSR---IHVIETTSSCPLI-------PFQD--- 124
Query: 198 MDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE 257
N+P A+ PPF
Sbjct: 125 ------------------INIPQAAKQ-----------------------RPPF------ 137
Query: 258 AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKL 317
++C G EM+ +GGE F+TR+I++S+ L+ +WYTSMVG+ S++ L++ L
Sbjct: 138 ------SACTGAEVEMITTGGEVEFVTRLIKESMQLRDRVQWYTSMVGKFSSVATLVNTL 191
Query: 318 RKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PARKIISPH 355
G EFVQG +T RWG+ WS++ P+ I P
Sbjct: 192 HDEGNKNWAIAEFVQGTKTRRWGIGWSWMDYRPSTDIARPR 232
>gi|417364426|ref|ZP_12137354.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353597244|gb|EHC54018.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 205
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 57/244 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHQHRY-DLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFES 254
F +S
Sbjct: 188 FHDS 191
>gi|417381887|ref|ZP_12148009.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353616571|gb|EHC67800.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
Length = 198
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 57/244 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFES 254
F +S
Sbjct: 188 FHDS 191
>gi|322709981|gb|EFZ01556.1| DUF890 domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 354
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 116/242 (47%), Gaps = 43/242 (17%)
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIGTGA+CIYPLLG + WSF+ + ++ L S P++ + +D
Sbjct: 1 MDIGTGASCIYPLLGCAQRPWSFIATGTSESLL--------SMPYLDLAHALADID---- 48
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
ESL E N D+S ++ A + SS L A S
Sbjct: 49 ----PESLKCAKRNVEIN-DLSSRVNVVARSTGSSLIPLDELALDS-------------- 89
Query: 240 EQFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
DF + NPPF+ S EE P T+C G+ EMV GGE AF+ I+++S
Sbjct: 90 --IDFTMTNPPFYRSEEELLSSAKRKQRPPYTACTGSKAEMVTPGGELAFVVCILKESCV 147
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PAR 349
L+ +WY++M G SNL I +LR G+ TEFVQG +T RW +AWSF P PA+
Sbjct: 148 LRARIQWYSAMFGFLSNLVDFIEQLRSSGIENYAVTEFVQGNKTRRWAIAWSFQPMRPAQ 207
Query: 350 KI 351
+
Sbjct: 208 HV 209
>gi|417804187|ref|ZP_12451219.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
LB226692]
gi|340741303|gb|EGR75452.1| 23S rRNA mA1618 methyltransferase [Escherichia coli O104:H4 str.
LB226692]
Length = 207
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 10/165 (6%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++P +HP+N++ D A L + P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKPGLHPRNRHHSRY-DLATLCQINPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAH 62
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLS--SNIIPTTSRNGDKVKGFDIGTGANC 128
+ + NW IPDG LCP VP R++YIH + DLL+ S IP + DIG GANC
Sbjct: 63 FYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA------SILDIGVGANC 116
Query: 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173
IYPL+G GW F GS+ + AL A+ + +NP ++ I +R+
Sbjct: 117 IYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRR 161
>gi|422604056|ref|ZP_16676073.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
pv. mori str. 301020]
gi|330887715|gb|EGH20376.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. mori
str. 301020]
Length = 194
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKQSIDFANPQAGRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ DLL+ + +IP G +K DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP----RGASIKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
NCIYPLLG S GW FVGSD+ A+ A +K+N +S+ I +R+ DN +
Sbjct: 137 NCIYPLLGHSDYGWHFVGSDIDSTAIAAATTIIKAN-GLSKAISVRQQDNRQ 187
>gi|443897530|dbj|GAC74870.1| hypothetical protein PANT_13d00038 [Pseudozyma antarctica T-34]
Length = 1309
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 177/428 (41%), Gaps = 97/428 (22%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
RRRRR +P I P Y + P+F LA + +F V ++D+ D +A R L
Sbjct: 868 RRRRRLLKPEIDPA-LYRKEAPNFRELARKHSTFAKIVIDDGGYEAKVDFQDAHALRCLA 926
Query: 66 RVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG 125
LLLHD G+ + LCPT ++ + D V G DIGTG
Sbjct: 927 ETLLLHDFGVQATLSPSNLCPT---------------------GSTSSSDAVVGLDIGTG 965
Query: 126 ANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNV--KSNPHISELIEIRKVDNSESTPS 182
A+ IYP+LG W FV +D + +L++A ++ +++ +S+ I + D PS
Sbjct: 966 ASAIYPVLGTRCFPHWRFVATDTDEASLQYASTHIVDRASNALSDRIALLHSDGGAFVPS 1025
Query: 183 IQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQF 242
A+ H VG + ++
Sbjct: 1026 ---------------------------------------AEGCKH-----VGGKYEAQEV 1041
Query: 243 DFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTS 302
F +CNPPF+ S + + P MV GGE F+ R++ +S A + W+T
Sbjct: 1042 HFTMCNPPFYSSAHDMQRSASFK-SQPPSAMVVEGGEAEFVRRMLRESAA-QAGVVWWTC 1099
Query: 303 MVGRKSNLKFLISKLRK------VGVTIVKTTEFVQGQTCRWGLAWSFVP---------- 346
M+G+ S++ L ++L+ VG V +G+T RW + WS P
Sbjct: 1100 MLGKLSSVVELAAELKALAKSGDVGGWGVHELPTGRGRTKRWVVMWSRTPLRLPDSLARE 1159
Query: 347 --PARKIISPHVAEKKNLSFML----EGVQRQFSALDVLQSIE---TFFSASGASCKLNA 397
P+ P E+++ +F L + Q ALD+L +++ + S S +L A
Sbjct: 1160 SLPSAVRDVPVATERRSKAFALGPRWTRREVQHVALDILGALKGCHVYASDCDDSARL-A 1218
Query: 398 SSFTVNIT 405
+F V +T
Sbjct: 1219 GTFEVVVT 1226
>gi|378977826|ref|YP_005225967.1| putative SAM-dependent methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|364517237|gb|AEW60365.1| putative SAM-dependent methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
Length = 229
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 10 REERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLL 69
+ ++P +HP+N++ + D L +P + ++ + G ID+ + A + L + LL
Sbjct: 2 KAQKPGLHPRNRHHQRY-DLPALCQAHPDLQGYITLNPLGEQTIDFANPQAVKALNKALL 60
Query: 70 LHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKG---FDIGTG 125
H + + W IPDG LCP VP R++YIH + DLL+ + +G+ K DIGTG
Sbjct: 61 AHFYAVKHWDIPDGFLCPPVPGRADYIHHLADLLAGD-------SGEVPKDATILDIGTG 113
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
AN IYPL+GA GW F GS++ A A+ + NP ++ I +R+ S++
Sbjct: 114 ANLIYPLIGAHEYGWRFTGSEINPQAFASAQAIINGNPGLTRQIRLRRQKESQA 167
>gi|242018147|ref|XP_002429542.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514490|gb|EEB16804.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 404
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 110/233 (47%), Gaps = 59/233 (25%)
Query: 119 GFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
G DIGTG CIY LLGA GW ++M + A NV N ++++LI ++ V+N
Sbjct: 61 GIDIGTGNVCIYSLLGARK-GWKMYATEMDPFNYKNAVTNVNKN-NLNDLISVKLVENHN 118
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
+L+GV+ +
Sbjct: 119 Q---------------------------------------------------ILLGVIDE 127
Query: 239 GEQFDFCICNPPFFESMEE----AGLNPKT-SCGGTPEEMVCS-GGERAFITRIIEDSVA 292
+DFC+CNPPFF+ E+ P+ + + VCS GGE +FI+++IE+SV
Sbjct: 128 NLNYDFCMCNPPFFDYNEKPVNRTFRRPQVDAVASNVKTEVCSEGGEISFISKLIEESVK 187
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
LK + YT++VG+KS+ +L L K+ + TEF QG+T RW LAWSF+
Sbjct: 188 LKTKIKIYTTLVGKKSDFLYLKKVLMKISPNSLTFTEFCQGKTTRWCLAWSFL 240
>gi|254488663|ref|ZP_05101868.1| methyltransferase [Roseobacter sp. GAI101]
gi|214045532|gb|EEB86170.1| methyltransferase [Roseobacter sp. GAI101]
Length = 289
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 139/331 (41%), Gaps = 47/331 (14%)
Query: 32 LASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW-IPDGQLCPTVPN 90
L S P E F + G+ ID+ D A R L R LL + +N+W IP LCP +P
Sbjct: 3 LVSDLPELEAFTITNPVGQTTIDFQDVAAVRMLNRALLKTYYDINFWDIPANYLCPPIPG 62
Query: 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150
R +YIH++ DLL+ + R G ++K DIGTGA+ +YPL G S GW F G D+
Sbjct: 63 RVDYIHYLADLLACSNNQEIPR-GRQIKALDIGTGASLVYPLTGQSEYGWHFTGVDIDAG 121
Query: 151 ALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEP 210
A +KS I E +++ +T + + N+ EP
Sbjct: 122 A-------IKSAQQICEFNKLK--------------ITLRRHKSRQNI-----FRGVIEP 155
Query: 211 SSSSSFNLPAGAQSSYHGPPVLVGV--VRDGEQFDFCICNPPFFESMEEAGLNPKTSCGG 268
+ L PP + G Q + + + G N + C
Sbjct: 156 CDAFHVTLC--------NPPFHASIEHANKGNQRKWRNLGKEHSKKLNFGGQNAELWC-- 205
Query: 269 TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328
GGE F+ ++E S+ W++S+V +K NL+ L L+ V K
Sbjct: 206 -------PGGEIKFLATMVEQSMEFADQCLWFSSLVSKKDNLQPLYRILKNAKVAEFKVV 258
Query: 329 EFVQGQTCRWGLAWSFVPPARKIISPHVAEK 359
+ QGQ +AW+++ ++ + + A K
Sbjct: 259 DMAQGQKTSRFIAWTYIKEGQRSLYMNAAGK 289
>gi|339263908|ref|XP_003366922.1| putative methyltransferase METT10D [Trichinella spiralis]
gi|316965198|gb|EFV49983.1| putative methyltransferase METT10D [Trichinella spiralis]
Length = 422
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 117/296 (39%), Gaps = 108/296 (36%)
Query: 59 NATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVK 118
+A R LT VLL D GL+ IP L P +P R NYIHW++DL +S+ P S V+
Sbjct: 9 DAIRALTNVLLKKDFGLSIEIPPDSLVPRIPGRLNYIHWLQDLAASHF-PDES-----VR 62
Query: 119 GFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
DIG+GA+CIYPLLGA + GW F+ + A+E A KNV N ++ LI + +VD
Sbjct: 63 CIDIGSGASCIYPLLGAKVCGWKFIAVEKLPDAIECARKNVMKN-NLQNLISVVEVDGPI 121
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
+ ++ E L + +
Sbjct: 122 NLYNVVEQLGAEMI---------------------------------------------- 135
Query: 239 GEQFDFCICNPPFFESMEEAGLN----------PKTSCGGTPEEMVCSGGERAFITRIIE 288
FC+CNPPFF+S + G P + G EEM GGE
Sbjct: 136 ---CSFCMCNPPFFDSQRKEGPGNLSSPSRRPAPHSCTVGRHEEMFADGGE--------- 183
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
VT + T F QG+T RW +AW+F
Sbjct: 184 ---------------------------------VTSMCETVFCQGKTQRWAVAWTF 206
>gi|422638556|ref|ZP_16701987.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
Cit 7]
gi|330950951|gb|EGH51211.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae Cit 7]
Length = 156
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 19/158 (12%)
Query: 3 SKKRRRRREERP----------TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR 52
++K R++ +RP T+HP+N++ + DFA L P FV + G+
Sbjct: 4 TRKPPRKKPQRPAKPAAPREKATLHPRNRH-QGQYDFAKLIKSSPELAAFVILNPYGKES 62
Query: 53 IDWTDFNATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIP 108
ID+ + A R R LL +G+ +W IP LCP +P R++Y+H++ DLL+ + +IP
Sbjct: 63 IDFANPQAVRVFNRALLKAFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP 122
Query: 109 TTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSD 146
G +K DIGTGANCIYPLLG S GW FVGSD
Sbjct: 123 ----RGASIKALDIGTGANCIYPLLGHSDYGWQFVGSD 156
>gi|417389268|ref|ZP_12153117.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|353622441|gb|EHC71996.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 204
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 57/244 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKSGLHPRNRHQHRY-DLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QKDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFES 254
F +S
Sbjct: 188 FHDS 191
>gi|417473587|ref|ZP_12168948.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|353650470|gb|EHC92824.1| Ribosomal RNA large subunit methyltransferase F, partial
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
Length = 205
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 57/244 (23%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
++ +HP+N++ ++ D A L P F+ + G +D+ + A + L + LL H
Sbjct: 4 QKSGLHPRNRH-QHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAH 62
Query: 72 DHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIY 130
+ + W IP G LCP VP R++YIH + DLL TT + D+G GANCIY
Sbjct: 63 FYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIY 118
Query: 131 PLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190
PL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 119 PLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR----------------- 161
Query: 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250
+ +P++ + G++ E +D +CNPP
Sbjct: 162 ----------------QEDPAA------------------IFTGIIHKNEFYDATLCNPP 187
Query: 251 FFES 254
F +S
Sbjct: 188 FHDS 191
>gi|328354743|emb|CCA41140.1| ribosomal RNA large subunit methyltransferase F [Komagataella
pastoris CBS 7435]
Length = 333
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 140/321 (43%), Gaps = 74/321 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
+F LA+ +PS + F S+ ++ EL +V+LL L + +LCP
Sbjct: 12 NFHQLAAQHPSLDQFFVGSQ-----YNFDTHEGLIELAQVILLEYFQLKVQLDKTRLCPR 66
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147
+PNR Y+ + L+ + GD DIGTG CIYPLLG+ L W F+G+D+
Sbjct: 67 IPNRLKYLRLVGSLVEQ------FKLGDSPLILDIGTGHTCIYPLLGSRLTSWRFIGTDI 120
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
+ +LE A+K ++ N SE I+++ V + D+ MD+
Sbjct: 121 DERSLECAKKVLEENNVSSERIQLKLVRSG----------------DDPFMDI------- 157
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLN----PK 263
E D + NPPF+ +E G+ K
Sbjct: 158 --------------------------------ENCDVVMTNPPFY---DETGIKQNKPEK 182
Query: 264 TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323
G P E+ GGE FI +I SV Y+S+VG+ ++L+ ++ KL+++ +T
Sbjct: 183 PVLVGKPTELATEGGESQFIINMINHSVKYPGRNTVYSSLVGKYNSLEPVVGKLKELNIT 242
Query: 324 IVKTTEFVQGQTCRWGLAWSF 344
+EF +T RW + W+F
Sbjct: 243 NYGLSEF-SNKTKRWIVFWTF 262
>gi|328860728|gb|EGG09833.1| hypothetical protein MELLADRAFT_74344 [Melampsora larici-populina
98AG31]
Length = 219
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 90/160 (56%), Gaps = 5/160 (3%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR--IDWTDFNATRELTRVLLLHDH 73
+HPKN Y PPDFA LA YP +PF+ DG R ID+ + A R+L+ LL D
Sbjct: 1 MHPKNPYCAAPPDFAALAYSYPGLKPFLIDRSDGTARVLIDFKNPEAIRQLSIALLKRDF 60
Query: 74 GLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
L+ +P +LCP VP R +Y WI DLL + T NG+ + G DIGTGA+ IYPLL
Sbjct: 61 DLDISLPPDRLCPMVPGRLDYCLWIIDLLDLQDLEIT--NGEDLIGVDIGTGASAIYPLL 118
Query: 134 GASLLGW-SFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172
+ LL + +++ + E A+ N+ +N ++ IR
Sbjct: 119 FSRLLSCVKMMATEIDQKSYESAQTNISNNDLAKQIDLIR 158
>gi|343425005|emb|CBQ68542.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 487
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 151/340 (44%), Gaps = 66/340 (19%)
Query: 22 YSENPPDFALLASLYPS-FEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIP 80
Y P+F LA YP+ F FV ++D+ D A R L + LLL D L+
Sbjct: 12 YRFKTPNFRQLAIKYPTTFGTFVKDDGGYEAKLDFHDAEAVRCLAQTLLLDDFHLDATFS 71
Query: 81 DGQLCPTVPNRSNYIHWIEDLLSSNIIPT-------TSRNGD-KVKGFDIGTGANCIYPL 132
LCP +PNR YI ++ +LL+ +PT R D V+G D+GTGA+ IYP+
Sbjct: 72 PTNLCPMIPNRLAYISFVHELLAWT-LPTWHVLEHFRRRPLDAAVRGLDVGTGASAIYPI 130
Query: 133 LGASLL-GWSFVGSDMTDVALEWAEKNV--KSNPHISELIEIRKVDNSESTPSIQESLTG 189
LGA+ W FV +D+ +L +A ++V ++ + + IE+ V ++
Sbjct: 131 LGAACFAAWRFVATDVDGASLAYAREHVVGRARDEVKQRIELVPVAEEDA---------- 180
Query: 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNP 249
+ E E + N P SS H L + R Q +C+
Sbjct: 181 -------------FVPEREEAYDFTMCNPP--FYSSQHEIDDLARIKR---QPANAVCH- 221
Query: 250 PFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN 309
GTP EM+ SGGE +F+ R+I +S+ RW+T M+GR S+
Sbjct: 222 ------------------GTPSEMITSGGEVSFVQRMIRESLTPAPKVRWWTCMLGRLSS 263
Query: 310 LKFLISKLR------KVGVTIVKTTEFVQGQTCRWGLAWS 343
+ L ++L+ KVG V G+T RW + W+
Sbjct: 264 VVTLSAELKQLAKAGKVGGWGVHELATGGGRTKRWVILWT 303
>gi|254572646|ref|XP_002493432.1| hypothetical protein [Komagataella pastoris GS115]
gi|238033231|emb|CAY71253.1| Hypothetical protein PAS_chr4_0027 [Komagataella pastoris GS115]
Length = 387
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 140/321 (43%), Gaps = 74/321 (23%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
+F LA+ +PS + F S+ ++ EL +V+LL L + +LCP
Sbjct: 12 NFHQLAAQHPSLDQFFVGSQ-----YNFDTHEGLIELAQVILLEYFQLKVQLDKTRLCPR 66
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147
+PNR Y+ + L+ + GD DIGTG CIYPLLG+ L W F+G+D+
Sbjct: 67 IPNRLKYLRLVGSLVEQ------FKLGDSPLILDIGTGHTCIYPLLGSRLTSWRFIGTDI 120
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
+ +LE A+K ++ N SE I+++ V + D+ MD+
Sbjct: 121 DERSLECAKKVLEENNVSSERIQLKLVRSG----------------DDPFMDI------- 157
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLN----PK 263
E D + NPPF+ +E G+ K
Sbjct: 158 --------------------------------ENCDVVMTNPPFY---DETGIKQNKPEK 182
Query: 264 TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323
G P E+ GGE FI +I SV Y+S+VG+ ++L+ ++ KL+++ +T
Sbjct: 183 PVLVGKPTELATEGGESQFIINMINHSVKYPGRNTVYSSLVGKYNSLEPVVGKLKELNIT 242
Query: 324 IVKTTEFVQGQTCRWGLAWSF 344
+EF +T RW + W+F
Sbjct: 243 NYGLSEF-SNKTKRWIVFWTF 262
>gi|162533079|ref|NP_791097.3| hypothetical protein PSPTO_1267 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|422656706|ref|ZP_16719151.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|28851716|gb|AAO54792.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
gi|331015240|gb|EGH95296.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 341
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 36 EKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLKA 94
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ D+L+ + +IP G VK DIGTGAN
Sbjct: 95 FYGIAHWDIPADYLCPPIPGRADYLHFLADVLAEDHEGVIP----RGASVKALDIGTGAN 150
Query: 128 CIYPLLGASLLGWSFVGSDM 147
CIYPLLG S GW FVGSD+
Sbjct: 151 CIYPLLGHSDYGWQFVGSDI 170
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G+ E+FD +CNPPF S++EA P + GG +E+
Sbjct: 202 ILLGLCDSNERFDVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 261
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K G VK E QG
Sbjct: 262 WCEGGEIGFVTQLIQESARLPGLVVWFSTLVSKASNLPPIQSALKKAGALEVKVVEMGQG 321
Query: 334 QTCRWGLAWSFVPPARK 350
Q +AW+F+ A++
Sbjct: 322 QKQSRFVAWTFLDKAQR 338
>gi|213968389|ref|ZP_03396533.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213927027|gb|EEB60578.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 341
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 36 EKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLKA 94
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ D+L+ + +IP G VK DIGTGAN
Sbjct: 95 FYGIAHWDIPADYLCPPIPGRADYLHFLADVLAEDHEGVIP----RGASVKALDIGTGAN 150
Query: 128 CIYPLLGASLLGWSFVGSDM 147
CIYPLLG S GW FVGSD+
Sbjct: 151 CIYPLLGHSDYGWQFVGSDI 170
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G+ E+FD +CNPPF S++EA P + GG +E+
Sbjct: 202 ILLGLCDSNERFDVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 261
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K G VK E QG
Sbjct: 262 WCEGGEIGFVTQLIQESARLPGLVVWFSTLVSKASNLPPIQSALKKAGALEVKVVEMGQG 321
Query: 334 QTCRWGLAWSFVPPARK 350
Q +AW+F+ AR+
Sbjct: 322 QKQSRFVAWTFLDKARR 338
>gi|147675312|ref|YP_001217165.1| SAM-dependent methyltransferase [Vibrio cholerae O395]
gi|262169633|ref|ZP_06037324.1| hypothetical protein VIJ_002873 [Vibrio cholerae RC27]
gi|146317195|gb|ABQ21734.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262021867|gb|EEY40577.1| hypothetical protein VIJ_002873 [Vibrio cholerae RC27]
Length = 311
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 125/295 (42%), Gaps = 81/295 (27%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ D A + L + LL +G+
Sbjct: 49 LHPRNRHRGQY-DFPALIKVVPELQSHVMKNPKGQWTINFADPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKE---NPKLNPSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194
+ GWS+VGSD+ V+++ A V+SN
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQASLIVQSN-------------------------------- 192
Query: 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFES 254
+ GH++ + +S FN G++ E++ CNPPF S
Sbjct: 193 ---SKLQGHIEFRLQKNSQHIFN----------------GIIGANERYTLTTCNPPFHAS 233
Query: 255 MEEAGL-------------------------NPKTSCGGTPEEMVCSGGERAFIT 284
+ +A + + + GG E+ C GGE AFI
Sbjct: 234 LADAQQGTQRKLTNLQANQRKKGRLATPTLSHSRLNFGGQKAELWCPGGEAAFIV 288
>gi|205829582|sp|Q887M4.2|RLMF_PSESM RecName: Full=Ribosomal RNA large subunit methyltransferase F;
AltName: Full=23S rRNA mA1618 methyltransferase;
AltName: Full=rRNA adenine N-6-methyltransferase
Length = 328
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ D+L+ + +IP G VK DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADVLAEDHEGVIP----RGASVKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDM 147
NCIYPLLG S GW FVGSD+
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDI 157
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G+ E+FD +CNPPF S++EA P + GG +E+
Sbjct: 189 ILLGLCDSNERFDVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 248
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K G VK E QG
Sbjct: 249 WCEGGEIGFVTQLIQESARLPGLVVWFSTLVSKASNLPPIQSALKKAGALEVKVVEMGQG 308
Query: 334 QTCRWGLAWSFVPPARK 350
Q +AW+F+ A++
Sbjct: 309 QKQSRFVAWTFLDKAQR 325
>gi|301384654|ref|ZP_07233072.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
tomato Max13]
gi|302059578|ref|ZP_07251119.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
tomato K40]
gi|302133006|ref|ZP_07258996.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length = 328
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ D+L+ + +IP G VK DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADVLAEDHEGVIP----RGASVKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDM 147
NCIYPLLG S GW FVGSD+
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDI 157
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G+ E+FD +CNPPF S++EA P + GG +E+
Sbjct: 189 ILLGLCDSNERFDVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 248
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K G VK E QG
Sbjct: 249 WCEGGEIGFVTQLIQESARLPGLVVWFSTLVSKASNLPPIQSALKKAGALEVKVVEMGQG 308
Query: 334 QTCRWGLAWSFVPPARK 350
Q +AW+F+ AR+
Sbjct: 309 QKQSRFVAWTFLDKARR 325
>gi|422587292|ref|ZP_16661963.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330873100|gb|EGH07249.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 328
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 11 EERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLL 70
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 22 REKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLK 80
Query: 71 HDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGA 126
+G+ +W IP LCP +P R++Y+H++ D+L+ + +IP G VK DIGTGA
Sbjct: 81 AFYGIAHWDIPADYLCPPIPGRADYLHFLADVLAEDREGVIP----RGPSVKALDIGTGA 136
Query: 127 NCIYPLLGASLLGWSFVGSDM 147
NCIYPLLG S GW FVGSD+
Sbjct: 137 NCIYPLLGHSDYGWQFVGSDI 157
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G+ E+FD +CNPPF S++EA P + GG +E+
Sbjct: 189 ILLGLCDSNERFDVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 248
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K G VK E QG
Sbjct: 249 WCEGGEIGFVTQLIQESARLPGLVVWFSTLVSKASNLPPIQSILKKAGALEVKVVEMGQG 308
Query: 334 QTCRWGLAWSFVPPARK 350
Q +AW+F+ A++
Sbjct: 309 QKQSRFVAWTFLDKAQR 325
>gi|422650101|ref|ZP_16712908.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330963191|gb|EGH63451.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 341
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 12 ERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH 71
E+ T+HP+N++ + DF L P FV + G+ ID+ + A R R LL
Sbjct: 36 EKATLHPRNRHQGHY-DFPKLIKSSPELAAFVILNPYGKESIDFANPQAVRVFNRALLKA 94
Query: 72 DHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIGTGAN 127
+G+ +W IP LCP +P R++Y+H++ D+L+ + +IP G VK DIGTGAN
Sbjct: 95 FYGIAHWDIPVDYLCPPIPGRADYLHFLADVLAEDREGVIP----RGPSVKALDIGTGAN 150
Query: 128 CIYPLLGASLLGWSFVGSDM 147
CIYPLLG S GW FVGSD+
Sbjct: 151 CIYPLLGHSDYGWQFVGSDI 170
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G+ E+FD +CNPPF S++EA P + GG +E+
Sbjct: 202 ILLGLCDSNERFDVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 261
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K G VK E QG
Sbjct: 262 WCEGGEIGFVTQLIQESARLPGLVVWFSTLVSKASNLPPIQSALKKAGALEVKVVEMGQG 321
Query: 334 QTCRWGLAWSFVPPARK 350
Q +AW+F+ A++
Sbjct: 322 QKQSRFVAWTFLDKAQR 338
>gi|437362292|ref|ZP_20748363.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435209830|gb|ELN93113.1| 23S rRNA mA1618 methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
Length = 260
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 68/261 (26%)
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147
+P R++YIH + DLL TT + D+G GANCIYPL+G GW F GS++
Sbjct: 1 MPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIYPLIGVHEYGWRFTGSEV 56
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
+D A+ A+ +++N +S I +R+ +
Sbjct: 57 SDAAMSSAQAIIQANTGLSRAIRLRR---------------------------------Q 83
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA--------- 258
+P++ + G++ E +D +CNPPF +S A
Sbjct: 84 KDPAA------------------IFTGIIHKNEFYDATLCNPPFHDSAAAARAGSERKRR 125
Query: 259 --GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLI 314
G N + GG +E+ C GGE AFI ++I +S + ++ W+T++V R NL L
Sbjct: 126 NLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQVLWFTTLVSRGENLPPLY 185
Query: 315 SKLRKVGVTIVKTTEFVQGQT 335
L + G V + +G++
Sbjct: 186 RALTEAGAVKVVKKRWPRGKS 206
>gi|414069241|ref|ZP_11405236.1| 23S rRNA (adenine-N6)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
gi|410808356|gb|EKS14327.1| 23S rRNA (adenine-N6)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
Length = 310
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 9/159 (5%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N + +N DF LL + +P+ PFV + G ID++D A + L +
Sbjct: 2 KENKTRSKLHPRNLH-KNGYDFDLLTTEHPALLPFVITTPAGTKSIDFSDNKAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +++W IP+ LCP +P R +YIH++ DLLS + IP G ++K DIG
Sbjct: 61 LLKAHYNIDFWDIPEHNLCPPIPGRVDYIHYLADLLSDDNQQQIPL----GRQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162
TGAN +YPL G S W F G+D+ +++ A++ + N
Sbjct: 117 TGANLVYPLTGTSEYKWHFTGTDIDAASVKIAKQIAQFN 155
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 13/127 (10%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSG 277
+ GV+ + + +CNPPF S EEA G P ++ GG E+ C G
Sbjct: 170 IFKGVINQKDLYHLTLCNPPFHASEEEASKGSERKWKNLGKTPSSTLNFGGHNNELWCEG 229
Query: 278 GERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCR 337
GE FI+ +I++S + W+TS+V +K N+ L L+ + K + QGQ
Sbjct: 230 GEVQFISNMIKESEDFAEQVLWFTSLVSKKDNIAALEEVLKAHPIAEYKIVDMAQGQKIS 289
Query: 338 WGLAWSF 344
+AWS+
Sbjct: 290 RFIAWSY 296
>gi|429099838|ref|ZP_19161944.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
dublinensis 582]
gi|426286178|emb|CCJ88057.1| Ribosomal RNA large subunit methyltransferase F [Cronobacter
dublinensis 582]
Length = 193
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 101/239 (42%), Gaps = 64/239 (26%)
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
DIG GANCIYPL+G GW F G+D ++ A+ A + +NP ++ I +R+ +
Sbjct: 4 LDIGVGANCIYPLIGQHEYGWRFTGTDTSEEAIRSASAIIDANPGLNRAIRLRR----QK 59
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
TP + GV+
Sbjct: 60 TPD-----------------------------------------------AIFNGVIHKN 72
Query: 240 EQFDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRI 286
E++D +CNPPF +S + A GL + GG +E+ C GGE FITR+
Sbjct: 73 ERYDATLCNPPFHDSADAASAGNARKRRNLGLAADSGLNFGGQQQELWCEGGEVGFITRM 132
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
I++S + W+T++V + NL L L + G V E QGQ +AWSF+
Sbjct: 133 IDESKLFARQVLWFTTLVSKGDNLPQLYRALEQAGAVKVVKKEMAQGQKQSRFIAWSFM 191
>gi|359452300|ref|ZP_09241651.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20495]
gi|358050644|dbj|GAA77900.1| 23S rRNA (adenine1618-N6)-methyltransferase [Pseudoalteromonas sp.
BSi20495]
Length = 310
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 9/159 (5%)
Query: 8 RRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRV 67
+ + R +HP+N + +N DF LL + +P+ PFV + G ID++D A + L +
Sbjct: 2 KENKTRSKLHPRNLH-KNGYDFDLLTTEHPALLPFVITTPAGTKSIDFSDNKAVKTLNQA 60
Query: 68 LLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKVKGFDIG 123
LL + +++W IP+ LCP +P R +YIH++ DLLS + IP G ++K DIG
Sbjct: 61 LLKAHYNIDFWDIPEHNLCPPIPGRVDYIHYLADLLSDDNQQQIPL----GRQIKVLDIG 116
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162
TGAN +YPL G S W F G+D+ +++ A++ + N
Sbjct: 117 TGANLVYPLTGTSEYKWHFTGTDIDAASVKIAKQIAQFN 155
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 13/127 (10%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSG 277
+ GV+ + + +CNPPF S EEA G P ++ GG E+ C G
Sbjct: 170 IFKGVINQKDLYHLTLCNPPFHASEEEASKGSERKWKNLGKTPSSTLNFGGHNNELWCEG 229
Query: 278 GERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCR 337
GE FI+ +I++S + W+TS+V +K N+ L L+ + K + QGQ
Sbjct: 230 GEVRFISNMIKESEDFAEQVLWFTSLVSKKDNIAALEEVLKAHPIAEYKIVDMAQGQKIS 289
Query: 338 WGLAWSF 344
+AWS+
Sbjct: 290 RFIAWSY 296
>gi|402578784|gb|EJW72737.1| hypothetical protein WUBG_16356, partial [Wuchereria bancrofti]
Length = 196
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 106/239 (44%), Gaps = 69/239 (28%)
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSI 183
TGA+C+Y LLGA LGW F+ +D A+E A +NV+ N +SE IE+ +V
Sbjct: 1 TGASCVYALLGAKQLGWRFLATDADPFAVEIANRNVQKNG-MSERIEVVRV--------- 50
Query: 184 QESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ-- 241
PA +V V+R +
Sbjct: 51 -----------------------------------PADCMIK------VVDVIRSHPEVE 69
Query: 242 FDFCICNPPFFESMEEAGLNPKTSCG----------------GTPEEMVCSGGERAFITR 285
F FC+CNPPF+E E N T+ G E+ +GGE AF++R
Sbjct: 70 FTFCMCNPPFYEYDEYLRNNVLTNVGSGSNCKDRPAPHSATVARSNELAVTGGEVAFVSR 129
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+IEDS L+ T + YTSMVG+KS+L L KL + T QG+T RW LAW+F
Sbjct: 130 LIEDSFVLQNTVKLYTSMVGKKSSLVELRKKLGRCLNVRSTVTTLYQGKTHRWVLAWTF 188
>gi|402220155|gb|EJU00227.1| hypothetical protein DACRYDRAFT_68457, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 204
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 104/215 (48%), Gaps = 44/215 (20%)
Query: 139 GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNM 198
GWS +GSD+ D++L WA +NVK N + + IEI V + P +Q L
Sbjct: 4 GWSMIGSDIDDISLHWARENVKLN-SLQDRIEILPVRADK--PILQPLL----------- 49
Query: 199 DMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA 258
A P S S +S H PP +FDF +CNPPF+ S EE
Sbjct: 50 ---------AYPESQYSPR--PLCPTSTHRPP----------RFDFLMCNPPFYSSAEEV 88
Query: 259 G-------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK 311
L+P C G+ EM+ GGE F+ R++ +S + + RWYTS++G+ S++K
Sbjct: 89 ADLAGMKELDPSGVCTGSDNEMITPGGEVGFVGRMVRESTRVGRRCRWYTSLLGKLSSVK 148
Query: 312 FLISKLRKVGVTI--VKTTEFVQGQTCRWGLAWSF 344
+I +R V I E QG+T R +AWSF
Sbjct: 149 EVIELIRSPEVNIDNYAIGEITQGRTRRLAIAWSF 183
>gi|71019685|ref|XP_760073.1| hypothetical protein UM03926.1 [Ustilago maydis 521]
gi|46099719|gb|EAK84952.1| hypothetical protein UM03926.1 [Ustilago maydis 521]
Length = 502
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 144/333 (43%), Gaps = 78/333 (23%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSN--------YIHWIEDLLS 103
+ID+ D A R L LLL D G++ + LCP + R + YI I +LL
Sbjct: 24 KIDFHDAQAVRCLAETLLLDDFGIHATFSEKNLCPMILTRFSGARWYRLAYIALIHELLE 83
Query: 104 SNIIPTTSRNGD--------KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEW 154
S + PT D V G DIGTGA+ IYPLLG W FV D+ +LE
Sbjct: 84 STL-PTLCVLRDFQNLPLTWHVNGLDIGTGASAIYPLLGTRCFARWRFVAIDIDSHSLEH 142
Query: 155 AEKNVKSNPHISELIEIRKVD-NSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSS 213
A ++V H+ I + VD N E P+ D++ + +EA
Sbjct: 143 ARQHVVHANHVRTRIALVHVDENDEFVPA----------------DINTKLAQEA----- 181
Query: 214 SSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA------GLNPKTS-C 266
+ +++ E F +CNPPF+ S +E P + C
Sbjct: 182 -------------------IWSMQNHELIHFTMCNPPFYTSQQEMLSLARIKKTPANAVC 222
Query: 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKL------RKV 320
GT EMV +GGE F+ R+I+ S++ + W+T M+G+ S++ + +L R++
Sbjct: 223 HGTSSEMVTAGGELRFVQRMIQQSLSDPRVV-WWTCMLGKLSSVVQVAQELEPLSNERRI 281
Query: 321 GVTIVKTTEFVQGQTCRWGLAWSF-----VPPA 348
V G+T RW L W+ +PP+
Sbjct: 282 RAWGVHELPTGGGRTRRWVLLWTTKSGLRIPPS 314
>gi|440471439|gb|ELQ40449.1| DUF890 domain protein [Magnaporthe oryzae Y34]
Length = 525
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 74/114 (64%), Gaps = 9/114 (7%)
Query: 240 EQFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEEMV-CSGGERAFITRIIEDSV 291
+ DF + NPPF+ES +E L P T+C G P EMV +GGE F+TRI+++S+
Sbjct: 262 DAIDFVMTNPPFYESEKELLTLAAQKELPPSTACTGAPVEMVHLAGGEVGFVTRILDESL 321
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
L++ RWYTSM+G+ S+L+ L+ LR GVT TEFVQG +T RW + WSF
Sbjct: 322 VLRERVRWYTSMLGKLSSLEVLVETLRDRGVTNYAVTEFVQGTKTKRWAVGWSF 375
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCP- 86
DF + + P F+ + R+G+ +D++D A +LT+ L GL +PD +LCP
Sbjct: 128 DFREMGTQDPDFKAVL--KRNGQ--LDFSDPKAVMQLTKSSLKLHFGLEMELPDDRLCPP 183
Query: 87 ---------TVPNRSNYIHWIEDLLSSN 105
VPNR NYI W++DLL S+
Sbjct: 184 VTTNKDLDTKVPNRHNYILWLKDLLDSS 211
>gi|422665303|ref|ZP_16725175.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
pv. aptata str. DSM 50252]
gi|330975721|gb|EGH75787.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 153
Score = 107 bits (268), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 19/155 (12%)
Query: 3 SKKRRRRREERP----------TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR 52
++K R++ +RP T+HP+N++ + DFA L P FV + G+
Sbjct: 4 TRKPPRKKPQRPAKPAAPREKATLHPRNRH-QGQYDFAKLIKSSPQLAAFVILNPYGKES 62
Query: 53 IDWTDFNATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIP 108
ID+ + A R R LL +G+ +W IP LCP +P R++Y+H++ DLL+ + +IP
Sbjct: 63 IDFANPQAVRVFNRALLKAFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP 122
Query: 109 TTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFV 143
G +K DIGTGANCIYPLLG S GW FV
Sbjct: 123 ----RGASIKALDIGTGANCIYPLLGHSDYGWQFV 153
>gi|134109421|ref|XP_776825.1| hypothetical protein CNBC3160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259505|gb|EAL22178.1| hypothetical protein CNBC3160 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 480
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 140/343 (40%), Gaps = 76/343 (22%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H N Y + PDFA LAS YP F PFV S DG I++ D A RELT+ LL D L
Sbjct: 1 MHQNNPYLKQKPDFARLASRYPKFAPFVSVSEDGYTSINFQDPTALRELTKCLLKEDWNL 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ DL + PT I + IY +L
Sbjct: 61 D----------------------VDLREDRLCPT------------IPNRLDYIYHVLDL 86
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHI--SELIEIRKVDNSESTPSIQESLTGKSVQ 193
PH+ S L +R +D +I L + ++
Sbjct: 87 --------------------------EPHLPSSSLRPLRILDIGTGATAIYPILLAR-LR 119
Query: 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP---PVLVGVVR---DGEQFDFCIC 247
+S + +G ++ N+P + + P P+L ++ E +D IC
Sbjct: 120 PDSRIVATGGFSYNHAKATLEKNNIPPSSITVLKSPTPDPILFPLLECKGKSEDWDLTIC 179
Query: 248 NPPFFESMEEA--GLNPK-----TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWY 300
NPPFF S +E G+ K + + E++ GGE AFIT +I +S+ + WY
Sbjct: 180 NPPFFASSQEMLQGMELKDRQAHAAPTASDNELITRGGELAFITSMIRESIDIGHRCTWY 239
Query: 301 TSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
T++VG+ S+L+ LI LR+ + Q +T RW L WS
Sbjct: 240 TTLVGKYSSLQPLIETLREFKIDNYFVINMKQSRTSRWILGWS 282
>gi|449485299|ref|XP_002187757.2| PREDICTED: methyltransferase-like protein 16-like [Taeniopygia
guttata]
Length = 423
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 100/199 (50%), Gaps = 34/199 (17%)
Query: 242 FDFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
+DFC+CNPPFF + EA G+N P + G E++ GGE F+ RII DS+
Sbjct: 42 YDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQ 101
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV------- 345
LK+ RWY+ M+G+K +L L +LR GV V TEF QG+T RW LAWSF
Sbjct: 102 LKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTHTEFCQGRTMRWALAWSFYDDVQVPS 161
Query: 346 PPA--RKIISPHVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVN 403
PP+ RK+ P +K ++FM VL S S GA+ +A
Sbjct: 162 PPSKRRKLEKP----RKPITFM------------VLASTVKELSVKGAAMGWDAVEAIAV 205
Query: 404 ITVSNDQCNTILKNEVNRV 422
+ ++ T LK + RV
Sbjct: 206 VRAWVEKILTDLKVQHKRV 224
>gi|429861813|gb|ELA36478.1| duf890 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 459
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 128/303 (42%), Gaps = 85/303 (28%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
+D+ D +A L LL GL +P +LCP + R NYI W++DLL S
Sbjct: 78 LDFNDPHAVIALNSALLKEHFGLQVDLPADRLCPPIAQRHNYILWLKDLLDSTSYEQPDH 137
Query: 113 NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172
+V G D+GT D+ + + +A++NVK N + + +R
Sbjct: 138 R--RVVGLDVGT---------------------DIDEKSCSYAKQNVKLNNLQNYIRVVR 174
Query: 173 KVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL 232
+ S +E L PAG
Sbjct: 175 R--------SPEERLVN-----------------------------PAG----------- 186
Query: 233 VGVVRDGEQFDFCICNPPFFESMEEA-------GLNPKTSCGGTPEEMVCSGGERAFITR 285
+GV + DF + NPPF+ S EEA + P E GGE AF+ R
Sbjct: 187 LGV----DHLDFVMTNPPFYTSEEEAKECEQAKATEQQNRFTIAPNEQSTEGGEVAFVGR 242
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG---QTCRWGLAW 342
I+E+S L++ +WYTSM G++++L ++ KL++ + TEF+QG +T RW +AW
Sbjct: 243 ILEESFELREQVQWYTSMFGKRASLDAILEKLQEHKIDNFAVTEFIQGPNSKTKRWAVAW 302
Query: 343 SFV 345
SF
Sbjct: 303 SFA 305
>gi|440478428|gb|ELQ59265.1| DUF890 domain protein [Magnaporthe oryzae P131]
Length = 335
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 74/114 (64%), Gaps = 9/114 (7%)
Query: 240 EQFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEEMV-CSGGERAFITRIIEDSV 291
+ DF + NPPF+ES +E L P T+C G P EMV +GGE F+TRI+++S+
Sbjct: 72 DAIDFVMTNPPFYESEKELLTLAAQKELPPSTACTGAPVEMVHLAGGEVGFVTRILDESL 131
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
L++ RWYTSM+G+ S+L+ L+ LR GVT TEFVQG +T RW + WSF
Sbjct: 132 VLRERVRWYTSMLGKLSSLEVLVETLRDRGVTNYAVTEFVQGTKTKRWAVGWSF 185
>gi|339242819|ref|XP_003377335.1| putative methyltransferase METT10D [Trichinella spiralis]
gi|316973876|gb|EFV57420.1| putative methyltransferase METT10D [Trichinella spiralis]
Length = 280
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y NPP+FA LA YP F G+ ++ + +A R LT VLL D GL
Sbjct: 7 MHPRNFYRNNPPNFAELALQYPDFRQHCAIDIYGKVNFNFKNPDAIRALTNVLLKKDFGL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ IP L P +P R NYIHW++DL +S+ P S V+ DIG+GA+CIYPLLGA
Sbjct: 67 SIEIPPDSLVPRIPGRLNYIHWLQDLAASH-FPDES-----VRCIDIGSGASCIYPLLGA 120
Query: 136 SLL 138
+
Sbjct: 121 KMF 123
>gi|149053371|gb|EDM05188.1| similar to Hypothetical UPF0049 protein ZK1128.2 in chromosome III
[Rattus norvegicus]
Length = 417
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 23/152 (15%)
Query: 242 FDFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
+DFC+CNPPFF + EA G+N P + G E++ GGE F+ RII DS+
Sbjct: 42 YDFCMCNPPFFANQLEAKGVNSRNSRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQ 101
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV------- 345
LK+ RWY+ M+G+K +L L +LR GV V TEF QG+T RW LAWSF
Sbjct: 102 LKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTFTEFCQGRTMRWALAWSFYDDVTVPS 161
Query: 346 PPA--RKIISPHVAEKKNLSFMLEG-VQRQFS 374
PP+ RK+ P +K ++F++ G V ++ S
Sbjct: 162 PPSKRRKLEKP----RKPITFVVLGSVMKELS 189
>gi|119610945|gb|EAW90539.1| methyltransferase 10 domain containing, isoform CRA_b [Homo
sapiens]
Length = 426
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 102/202 (50%), Gaps = 34/202 (16%)
Query: 242 FDFCICNPPFFESMEEA-GLN--------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
+DFC+CNPPFF + EA G+N P + G E++ GGE F+ RII DS+
Sbjct: 42 YDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQ 101
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV------- 345
LK+ RWY+ M+G+K +L L +LR GV V TEF QG+T RW LAWSF
Sbjct: 102 LKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPS 161
Query: 346 PPA--RKIISPHVAEKKNLSFMLEGVQRQFSALDVLQSIETFFSASGASCKLNASSFTVN 403
PP+ RK+ P +K ++F+ VL S+ S + + + V
Sbjct: 162 PPSKRRKLEKP----RKPITFV------------VLASVMKELSLKASPLRSETAEGIVV 205
Query: 404 ITVSNDQCNTILKNEVNRVDEG 425
+T ++ T LK + RV G
Sbjct: 206 VTTWIEKILTDLKVQHKRVPCG 227
>gi|361126393|gb|EHK98395.1| putative methyltransferase-like protein C27D7.08c [Glarea
lozoyensis 74030]
Length = 336
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 8/113 (7%)
Query: 240 EQFDFCICNPPFF-------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
E DF ICNPPF+ +S + P T+C G+ EMV GGE AF++R+I +S+
Sbjct: 120 ENIDFTICNPPFYISTPQMIQSASQKLRQPFTACTGSESEMVTEGGEIAFVSRMITESLV 179
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
L+ +WYTSM+G S++ LI KL+ G+ TEFVQG +T RWGLAWSF
Sbjct: 180 LRDRVQWYTSMLGIFSSVSILIQKLKANGIENYAVTEFVQGKKTRRWGLAWSF 232
>gi|407920877|gb|EKG14056.1| S-adenosyl-L-methionine dependent methyltransferase predicted
[Macrophomina phaseolina MS6]
Length = 445
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 133/318 (41%), Gaps = 79/318 (24%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
++D+ D A R+LT LL + GL +P +LCP +R Y+ WI+DL+ S IIP+
Sbjct: 20 KVDFHDPRAVRQLTASLLKREFGLVVDLPPDRLCPPT-SRYLYVRWIQDLVES-IIPSYY 77
Query: 112 RNGD--------------KVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAE 156
+ D +V G DIG GA+CIY LL + W +D+ + A
Sbjct: 78 DSFDVKSTSPRPNPNKHRQVIGLDIGCGASCIYTLLALKTRPTWRMNATDIDPLNFSHAL 137
Query: 157 KNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSF 216
+NV++N ++ N P + L H+D
Sbjct: 138 RNVQANGFSPRCHVMKTKPNDPLIPLVALELE--------------HLD----------- 172
Query: 217 NLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE---------AGLNPKTSCG 267
F C NPPFF S+EE P + C
Sbjct: 173 -------------------------FTIC--NPPFFSSVEEWKASITGEGKAKGPNSVCT 205
Query: 268 GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327
G EMV GG+ F+ R++E+S +L + WYTSM+G+ S+ L+ +L+++G
Sbjct: 206 GAQVEMVTEGGDLGFVLRMVEESRSLGEKVAWYTSMLGKLSSTIKLVERLKEIGCKNWAV 265
Query: 328 TEF-VQGQTCRWGLAWSF 344
Q +T RW + WS+
Sbjct: 266 CCLGAQHKTRRWAVGWSW 283
>gi|390595912|gb|EIN05316.1| hypothetical protein PUNSTDRAFT_91935, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 343
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 62/239 (25%)
Query: 116 KVKGFDIGTGANCIYPLLGASLLG--WSFVGSDMTDVALEWAEKNVKSNPHISELIE-IR 172
+++G D+GTGA+ IYPLL ASL W + +D+ + +L + + N + L + IR
Sbjct: 19 QIQGIDVGTGASVIYPLL-ASLKSPEWHIIATDVDETSL----RYARQNVQSNGLDDRIR 73
Query: 173 KVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL 232
V++ P + T D
Sbjct: 74 IVESKTGGPILSHLFTDDVTSD-------------------------------------- 95
Query: 233 VGVVRDGEQFDFCICNPPFFESMEE---AGLN----PKTSCGGTPEEMVCSGGERAFITR 285
Q DF +CNPPF+ S EE A L P+ C G EM+ GGE AF++R
Sbjct: 96 --------QCDFVLCNPPFYASEEEIASAALTKEEGPRAVCTGGENEMITPGGEVAFVSR 147
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
++++S + WYTSM+G+ S++ ++ LR+ + TEFVQGQT RW + WSF
Sbjct: 148 MVDESRDMADC-HWYTSMLGKLSSVVAIVDHLRRHTIDNYVLTEFVQGQTRRWAVGWSF 205
>gi|381402459|ref|ZP_09927261.1| 23S rRNA mA1618 methyltransferase, partial [Kingella kingae
PYKK081]
gi|380832558|gb|EIC12524.1| 23S rRNA mA1618 methyltransferase, partial [Kingella kingae
PYKK081]
Length = 113
Score = 103 bits (258), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/115 (44%), Positives = 76/115 (66%), Gaps = 8/115 (6%)
Query: 62 RELTRVLLLHDHGLNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSN---IIPTTSRNGDKV 117
+ L + LL H +G+ +W IP LCP +P R++YIH++ DLLS+N IPT G V
Sbjct: 1 KMLNKALLKHFYGIQYWDIPQDFLCPPIPGRADYIHYLADLLSANHQGQIPT----GPAV 56
Query: 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172
+ DIG GANCIYP++G GW FVGSD+ +++ A+ V++NP++ + I+IR
Sbjct: 57 QVLDIGVGANCIYPIIGHRSYGWKFVGSDIHSASVKSAQFIVEANPNLRKGIQIR 111
>gi|224012715|ref|XP_002295010.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969449|gb|EED87790.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 391
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 66/309 (21%)
Query: 58 FNATRELTRVLLLHDHGLNW-WIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGD- 115
FNA+ LTR LL GL +P G+LCP VPNR+NY+ W+ +LL + +G
Sbjct: 77 FNAS--LTRSLLHQQFGLEMPSLPAGRLCPPVPNRANYVAWLRELLLRSEKELCCFSGGV 134
Query: 116 ------KVKGFDIGTGANCIYPLLGASLL--------------GWSFVGSDMTDVALEWA 155
+ +G DIGTG + IYPLL + L W F+ +D+ VA++ A
Sbjct: 135 EVEKKCQHQGIDIGTGVSAIYPLLLTTRLFAASGGGSNSQTYPPWRFLATDIDPVAVQSA 194
Query: 156 EKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSS 215
+NV++N + + I + V+N ++ +++ T S S + MDE
Sbjct: 195 RENVEAN-RLEDRICVVPVENEANSNTLRSEAT--STLSTSKGPLFAAMDEAKHNPMFQR 251
Query: 216 FNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV- 274
+ + ++Y QFDF + NPPF+ + +EA +P+ + +M
Sbjct: 252 SRINGASLAAY-------------PQFDFVMTNPPFYSTTKEA-TDPRAGDKRSRTDMSF 297
Query: 275 ------------------------CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNL 310
GG+ F+T I++DS + + WYTS++ ++S+L
Sbjct: 298 NEGVYVQPISNAFDIDEGSSGKCDLQGGDVGFVTAIMKDSQFFRHSVTWYTSLLAKRSSL 357
Query: 311 KFLISKLRK 319
L+ + +
Sbjct: 358 DALLQQYER 366
>gi|443527650|ref|ZP_21093703.1| ribosomal RNA large subunit methyltransferase F, partial [Vibrio
cholerae HC-78A1]
gi|443453992|gb|ELT17806.1| ribosomal RNA large subunit methyltransferase F, partial [Vibrio
cholerae HC-78A1]
Length = 232
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N++ DF L + P + V + G+ I++ + A + L + LL +G+
Sbjct: 49 LHPRNRHRGQY-DFPALIKVVPELQSHVMKNPKGQWTINFANPIAVKLLNKALLALHYGV 107
Query: 76 NWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+W IP+G LCP +P R++YIH + DLL + N +V DIG GANCIYP++G
Sbjct: 108 TYWDIPEGFLCPPIPGRADYIHRVADLLLKD---NPKLNPSQVTALDIGVGANCIYPIVG 164
Query: 135 ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
+ GWS+VGSD+ V+++ A V+SN + IE R NS+
Sbjct: 165 VTEYGWSWVGSDVDPVSIQQASLIVQSNSKLQGHIECRLQKNSQ 208
>gi|321253989|ref|XP_003192923.1| hypothetical protein CGB_C6130W [Cryptococcus gattii WM276]
gi|317459392|gb|ADV21136.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 485
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 5/148 (3%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H N Y + PDFA LAS YP F PFV S DG P ID+ + A RELTR LL D L
Sbjct: 1 MHQNNPYLKQKPDFARLASRYPKFAPFVNISEDGYPSIDFQNPAALRELTRCLLKEDWDL 60
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ + + +LCPT+PNR +YI+ + DL +P++S ++ D+GTGA IYP+L A
Sbjct: 61 DVDLREDRLCPTIPNRLDYIYHMLDLEPH--LPSSSLRPLRI--LDVGTGATAIYPILLA 116
Query: 136 SLLGWS-FVGSDMTDVALEWAEKNVKSN 162
L S V +++ + + A+ ++ N
Sbjct: 117 RLRPDSRIVATEIDESSYRHAKATLEKN 144
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 10/124 (8%)
Query: 230 PVLVGVVR---DGEQFDFCICNPPFFESMEEA--GLNPK-----TSCGGTPEEMVCSGGE 279
P+L +++ + E++DF ICNPPFF S +E G+ K + + E++ GGE
Sbjct: 161 PILFPLLQSKGNCEEWDFTICNPPFFASTQEMLQGMELKDRQAHAAPTASDNELITRGGE 220
Query: 280 RAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWG 339
AFIT +I +S+ + Q WYT++VG+ S+L+ LI LR + + T Q +T RW
Sbjct: 221 LAFITSMIRESIDIGQRCTWYTTLVGKYSSLQPLIEILRDLKIDNYFITNIKQSRTSRWI 280
Query: 340 LAWS 343
L WS
Sbjct: 281 LGWS 284
>gi|340960135|gb|EGS21316.1| hypothetical protein CTHT_0031710 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 662
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 22/142 (15%)
Query: 240 EQFDFCICNPPFF-------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
E DF + NPPF+ ES + P ++C G EMVC GGE A + R++ +S+
Sbjct: 145 ESVDFVMMNPPFYSSEDDMLESAKRKSRPPMSACTGARVEMVCDGGEVAHVCRLLSESLI 204
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PA- 348
L++ WYTSM+G+ S+L+ L+ KLR G+ TEF+QG +T RW L WSF P PA
Sbjct: 205 LRERVSWYTSMLGKLSSLEILVEKLRTHGIDNYAVTEFIQGTKTRRWALGWSFGPMRPAE 264
Query: 349 -----------RKIISPHVAEK 359
RK++ P V K
Sbjct: 265 NAARGMKSSAGRKLLPPPVTAK 286
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 8 RRREERPTIHP--KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELT 65
RR E P + +N Y+ P DF LA P F +V ++GR +++TD +A +LT
Sbjct: 47 RRWEPNPHLDAYFRNLYTSEP-DFKKLAVQDPDFATYV---QNGR--LNFTDPDAMMQLT 100
Query: 66 RVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIP 108
+ LL D GL +P +LCP P+R I +E ++P
Sbjct: 101 KTLLKVDFGLRIDLPRDRLCP--PDR---IRVLERKPEDKLVP 138
>gi|289678202|ref|ZP_06499092.1| putative SAM-dependent methyltransferase, partial [Pseudomonas
syringae pv. syringae FF5]
Length = 168
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 19/152 (12%)
Query: 3 SKKRRRRREERP----------TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR 52
++K R++ +RP T+HP+N++ + DFA L P FV + G+
Sbjct: 21 TRKPPRKKPQRPAKPAAPREKATLHPRNRH-QGQYDFAKLIKSSPELAAFVILNPYGKES 79
Query: 53 IDWTDFNATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIEDLLSSN---IIP 108
ID+ + A R R LL +G+ +W IP LCP +P R++Y+H++ DLL+ + +IP
Sbjct: 80 IDFANPQAVRVFNRALLKAFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGVIP 139
Query: 109 TTSRNGDKVKGFDIGTGANCIYPLLGASLLGW 140
+G +K DIGTGANCIYPLLG S GW
Sbjct: 140 ----HGASIKALDIGTGANCIYPLLGHSDYGW 167
>gi|241562846|ref|XP_002401478.1| conserved hypothetical protein [Ixodes scapularis]
gi|215499877|gb|EEC09371.1| conserved hypothetical protein [Ixodes scapularis]
Length = 451
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 65/237 (27%)
Query: 120 FDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSES 179
+ GTGA+CI PLLG GWSF ++ V L H +E ++ ++N
Sbjct: 16 YSSGTGASCILPLLGHKQCGWSFTATETDPVNL----------AHATENVKRNNLENHIK 65
Query: 180 TPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239
++ G + E E V D
Sbjct: 66 VVAV------------------GSLREAHE------------------------AVEGDS 83
Query: 240 EQFDFCICNPPFFESMEEAGLN----------PKTSCGGTPEEMVC-SGGERAFITRII- 287
DF +CNPPFF S EEA P + G EE V +GGE AF+ ++
Sbjct: 84 TAVDFVVCNPPFFGSPEEADAQGRAEEQGRTPPSSDMSGAEEEKVWPAGGEVAFVRDVLL 143
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+DS+ L++ R YT M+G+KS++K ++++L + GV +TEF QG+T RWG+AW+F
Sbjct: 144 KDSLGLREKVRLYTVMLGKKSSVKQVMAELNEQGVNCT-STEFCQGKTMRWGVAWTF 199
>gi|213583528|ref|ZP_03365354.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
Length = 200
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 64/237 (27%)
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
+ GANCIYPL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 2 LDVGANCIYPLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR-------- 53
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
+ +P++ + G++ E
Sbjct: 54 -------------------------QKDPAA------------------IFTGIIHKNEF 70
Query: 242 FDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIE 288
+D +CNPPF +S A G N + GG +E+ C GGE AFI ++I
Sbjct: 71 YDATLCNPPFHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIA 130
Query: 289 DSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
+S ++ W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 131 ESQTFRRQVLWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 187
>gi|295673903|ref|XP_002797497.1| DUF890 domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280147|gb|EEH35713.1| DUF890 domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 400
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 10/125 (8%)
Query: 241 QFDFCICNPPFFESMEE----AGLN---PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
+ DF +CNPPF+ES EE A + P T+C G EM+ +GGE F+TR+I++S+ L
Sbjct: 112 RLDFTMCNPPFYESREELISAAEMKQRPPFTACTGAEVEMITTGGEVEFVTRLIKESMQL 171
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PARK 350
+ +WYTSMVG+ S++ L++ L G EFVQG +T RWG+AWS++ P+
Sbjct: 172 RDRVQWYTSMVGKFSSVATLVNTLHDEGNKNWAIAEFVQGTKTRRWGIAWSWMDYRPSTD 231
Query: 351 IISPH 355
I PH
Sbjct: 232 IARPH 236
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 21/73 (28%)
Query: 19 KNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW 78
+N Y +N DFA LA YP F A ++LT+ LL D GL+
Sbjct: 5 RNIY-KNDVDFAALAFQYPDF--------------------AKQQLTKSLLKRDFGLDVD 43
Query: 79 IPDGQLCPTVPNR 91
+PD +LCPTVPNR
Sbjct: 44 LPDDRLCPTVPNR 56
>gi|359784770|ref|ZP_09287936.1| 23S rRNA mA1618 methyltransferase [Halomonas sp. GFAJ-1]
gi|359297915|gb|EHK62137.1| 23S rRNA mA1618 methyltransferase [Halomonas sp. GFAJ-1]
Length = 212
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 72/255 (28%)
Query: 112 RNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171
R VK DIGTGAN IYPLL + GW VGSD+ +LE + NP
Sbjct: 9 REQHSVKLLDIGTGANGIYPLLACQIYGWQCVGSDINPESLENVATIITHNP-------- 60
Query: 172 RKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPV 231
++++S T ++ D+++ +
Sbjct: 61 ----------TLKDSFTLRTQHDKNH---------------------------------I 77
Query: 232 LVGVVRDGEQFDFCICNPPFFESMEEA------GLN---------------PKTSCGGTP 270
G+++ GE FD +CNPPF S++EA LN P + GG
Sbjct: 78 FEGIIQAGEFFDVSVCNPPFHASLDEALKGSQLKLNNLARSRGEQKTKKASPTLNFGGQG 137
Query: 271 EEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEF 330
E+ C GGE+ F+ ++I +S RW++S+V + N+K +RK+G + E
Sbjct: 138 AELWCKGGEQLFLKKLIRESQLYSTQCRWFSSLVSKIDNVKPAKKLIRKLGAVDCREIEM 197
Query: 331 VQGQTCRWGLAWSFV 345
QG LAW+F+
Sbjct: 198 KQGNKVTRILAWTFI 212
>gi|296811993|ref|XP_002846334.1| DUF890 domain-containing protein [Arthroderma otae CBS 113480]
gi|238841590|gb|EEQ31252.1| DUF890 domain-containing protein [Arthroderma otae CBS 113480]
Length = 412
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 80/130 (61%), Gaps = 13/130 (10%)
Query: 242 FDFCICNPPFFES-------MEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
DF +CNPPF+ES EE P + C G EM+ GGE AF+ ++IE+S+ L+
Sbjct: 155 LDFTMCNPPFYESREEMLQLAEEKQHEPLSVCTGAETEMITPGGEVAFVNKMIEESLRLR 214
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIIS 353
+ +WYTSM+G++S+L LI +L+++G TEF+QG +T RW +AWS+ K +
Sbjct: 215 EAVKWYTSMLGKRSSLLSLIEELQRLGNKNWAVTEFIQGDKTKRWAIAWSW-----KDVR 269
Query: 354 PHVAEKKNLS 363
P + +++S
Sbjct: 270 PTMGVARSIS 279
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 29/96 (30%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF+ LA P+F+ F+ + + ++D+++ +A LL D GL +P +LCP
Sbjct: 13 DFSALALQDPAFKEFL----NAKGQLDFSNPDAVS-----LLRRDFGLEVELPGDRLCPP 63
Query: 88 VPNRS--------------------NYIHWIEDLLS 103
VPNR NYI W++DL+
Sbjct: 64 VPNRYVVCDPLDDYSSLIDGLWCRLNYILWLQDLID 99
>gi|258565087|ref|XP_002583288.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906989|gb|EEP81390.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 490
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 73/112 (65%), Gaps = 8/112 (7%)
Query: 241 QFDFCICNPPFFESMEE--AGLN-----PKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
+ F +CNPPF+ES EE A N P ++C G P EMV +GGE F++R+IE+SV L
Sbjct: 234 RLQFTMCNPPFYESEEEMMASANLKHRPPNSACTGAPVEMVTTGGEERFVSRMIEESVKL 293
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+ +WY+SM+G+ S++ L+ KL++ G TEFV G +T RW +AWS+
Sbjct: 294 RTNVQWYSSMLGKLSSVTTLVEKLQEAGNQNWAVTEFVPGSKTRRWAIAWSW 345
>gi|436620188|ref|ZP_20514594.1| 23S rRNA mA1618 methyltransferase, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434964848|gb|ELL57823.1| 23S rRNA mA1618 methyltransferase, partial [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
Length = 195
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 64/233 (27%)
Query: 126 ANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQE 185
ANCIYPL+G GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 1 ANCIYPLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR------------ 48
Query: 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFC 245
+ +P++ + G++ E +D
Sbjct: 49 ---------------------QKDPAA------------------IFTGIIHKNEFYDAT 69
Query: 246 ICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRIIEDSVA 292
+CNPPF +S A G N + GG +E+ C GGE AFI ++I +S +
Sbjct: 70 LCNPPFHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQS 129
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
++ W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 130 FRRQVLWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 182
>gi|189198237|ref|XP_001935456.1| siroheme synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187981404|gb|EDU48030.1| siroheme synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 487
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 66/257 (25%)
Query: 52 RIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111
++D+ D + L++ +L D GL +P +LCP +PNR NY+ W++ L+ S P +
Sbjct: 274 KLDFQDPETIQTLSKAILKVDFGLELHVPGDRLCPPIPNRWNYVAWLQGLIDST-SPNYT 332
Query: 112 RNGD---KVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE 167
N D +++G DIGTGA+ IY LL S WS +D+ + E A +N+ N +
Sbjct: 333 SNYDPNRQIRGLDIGTGASAIYTLLCLKSRPNWSMCATDIDKKSFESAARNLALN---TL 389
Query: 168 LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYH 227
+ + + +E P I
Sbjct: 390 MTRTKLLQTTELNPLI-------------------------------------------- 405
Query: 228 GPPVLVGVVRDGEQFDFCICNPPFFESM---------EEAGLNPKTSCGGTPEEMVCSGG 278
P +GV + DF ICNPPFF + E P C G+ EMV GG
Sbjct: 406 -PLAALGV----DHLDFTICNPPFFNDVADMQSSLKGEGKSWKPNAVCTGSENEMVYPGG 460
Query: 279 ERAFITRIIEDSVALKQ 295
+ F+T+++ +S+ L++
Sbjct: 461 DVGFVTKMVNESLVLRE 477
>gi|156089291|ref|XP_001612052.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799306|gb|EDO08484.1| conserved hypothetical protein [Babesia bovis]
Length = 461
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 184/464 (39%), Gaps = 142/464 (30%)
Query: 6 RRRRREERPTIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWT--------- 56
RR R ++HP+++++ D+ L+ +P + R +P W
Sbjct: 23 RRNDNGARQSMHPRSRHNIKD-DYIALSRAFPVLK------RHMKPNPKWKVTMPKHQMY 75
Query: 57 --DFN---ATRELTRVLLLHDHGLNWWIPDG----------------------------- 82
DFN A L+R +L H +G+ +++P G
Sbjct: 76 HYDFNHPDAVYHLSRAILNHVYGIKFYLPCGCPHGSCDPYLRTERSDTDCPAFVDDEIPV 135
Query: 83 --QLCPTVPNRSNYIHWIEDLLS-SNIIPTTSRN------------------GDKVKGFD 121
L P VP R+NYIH++ DLL+ SN P TS + G++VK D
Sbjct: 136 QRYLAPCVPGRANYIHYLADLLNLSNNSPDTSADSSELKDDASNMKLQNILKGERVKVLD 195
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR------KVD 175
IGTGANCIYPL+G++ GWSF+ +D+ AL A++N++ N ++++ +E+R ++
Sbjct: 196 IGTGANCIYPLIGSAEYGWSFIATDIDINALMLAKQNIQLN-NMAKTVELRLQKDTLRMF 254
Query: 176 NSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGV 235
P LT + S++D + P S+ A P ++
Sbjct: 255 TGVLMPHEFVHLTMCNPPFHSSLDQAN-----LNPRVSTC----ATINELVFNPGMVATF 305
Query: 236 VRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQ 295
DG FD N F + +N S + GE AF+ ++ +S
Sbjct: 306 SIDG--FDLQKVNKNKF--FVDGQVNYTFSSDASEH------GEVAFVEIMLVESRFHAH 355
Query: 296 TFRWYTSMVGRKSNLKFLISKLR------------------------------------- 318
W+TS+V R S LK + S ++
Sbjct: 356 NALWFTSLVARLSTLKRIKSHIQADMKFYHNSKAKQVAFLNARIEDLNQVCESDQRNDDI 415
Query: 319 -KVGVTIVKTTEF-----VQGQTCRWGLAWSFVPPAR--KIISP 354
++ V+ + EF QG+ RW +AW++ A+ KI+ P
Sbjct: 416 FRINVSDLHACEFRAFTLSQGKQTRWVIAWTYFNAAQRYKILKP 459
>gi|242213015|ref|XP_002472338.1| predicted protein [Postia placenta Mad-698-R]
gi|220728615|gb|EED82506.1| predicted protein [Postia placenta Mad-698-R]
Length = 194
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 102/233 (43%), Gaps = 58/233 (24%)
Query: 120 FDIGTGANCIYPLLGA-SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSE 178
D GTGA+ IYPLLG S W+FV +D+ + +L A NV+ N
Sbjct: 10 LDSGTGASAIYPLLGCRSNPSWNFVATDVDEKSLHHARLNVQQN---------------- 53
Query: 179 STPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD 238
+QE ++ + +S +D + P + R
Sbjct: 54 ---WLQERISPINQCRQSVLD-------DIHPQKCN----------------------RA 81
Query: 239 GEQFDFCICNPPFFESMEEA-------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
F C NPPF+ S E+ P C G EMV GGE F+ ++ +S+
Sbjct: 82 KYDFTMC--NPPFYSSREDVLRSAEVKEFEPTAVCTGADVEMVTPGGEANFVCTMVRESL 139
Query: 292 ALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+ RWYTSM+G+ ++L +++ LR V TEFVQGQT RW +AWSF
Sbjct: 140 ETRAQCRWYTSMLGKLASLTDVVALLRAETVDNYACTEFVQGQTRRWAIAWSF 192
>gi|71029662|ref|XP_764474.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351428|gb|EAN32191.1| hypothetical protein, conserved [Theileria parva]
Length = 456
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 175/493 (35%), Gaps = 200/493 (40%)
Query: 7 RRRREERPTIHPKNKY--------------SENPPDFALLASLYPSFEPFVFYSRDGRP- 51
+R+R++ P + +++Y + DF LL+ +P + + + +P
Sbjct: 3 KRKRDDSPDVDSESEYPNAGLSNLTKSFNNGQLTDDFQLLSKYFPFLKKHMTLNLRWKPF 62
Query: 52 -------RIDWTDFNATRELTRVLLLHDHGLNWWIP------------------------ 80
D+ +A L++ +L H++GL ++P
Sbjct: 63 MPKSLTYHYDFNHPDAVYHLSKAILKHNYGLELYLPCSCEEDSCNENKDLEVLNQHFRDL 122
Query: 81 DGQ------LCPTVPNRSNYIH-------------WIEDLLSSNIIPTTSRNGDKVKGFD 121
+G L P VPNR +YI +I D+ N+ G + D
Sbjct: 123 NGSSDLVRYLAPCVPNRLSYIKAASSLFSLKNNEPYIFDVEDFNLPSDDYLKGSNIIVLD 182
Query: 122 IGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
IGTGA+CIYPL+GA W+F+G+D+ ++ LE A KNV+ N H+ E I +R + TP
Sbjct: 183 IGTGASCIYPLIGARENSWNFIGTDIDNLTLEMARKNVEVN-HLEESISLR----LQRTP 237
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
+ + GV+ E
Sbjct: 238 T-----------------------------------------------RIFNGVLYSHEL 250
Query: 242 FDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV-------------------------CS 276
F +CNPPF ++ LNP+TS GT E+V C+
Sbjct: 251 FALTVCNPPFHARLDMTNLNPRTSPTGTERELVFGVPDDANMVLEQTYLDSIDQVGGTCT 310
Query: 277 G--------------GERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK----------- 311
G+ AFI +I++S W+T+++ R + LK
Sbjct: 311 SVSGQLKCALSEMKQGDLAFIEIMIQESKLYCNNAVWFTTLIPRMTTLKKIKNLIHREMR 370
Query: 312 -----------FLISKLR-----------------KVGVTIVKTTEFVQ-----GQTCRW 338
FL SK+ +V V+ V EF + G RW
Sbjct: 371 HYILNHLQQAEFLDSKINHMYYEGSRFKFATKPEAQVDVSNVHICEFRKFTLKNGNQTRW 430
Query: 339 GLAWSFVPPARKI 351
+AW+F +++
Sbjct: 431 VVAWTFYNSQQRL 443
>gi|261195658|ref|XP_002624233.1| DUF890 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239588105|gb|EEQ70748.1| DUF890 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 350
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 8/121 (6%)
Query: 233 VGVVRDGEQFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITR 285
+G+ + DF +CNPPF+ES +E P ++C G EM+ +GGE AF+TR
Sbjct: 58 IGLPESNARLDFTMCNPPFYESRDELISAAKAKQRPPFSACTGAEVEMITAGGEVAFVTR 117
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+I +SV L++ +WYTSMVG+ S++ L++ L + G EFVQG +T RW + WS+
Sbjct: 118 MIRESVKLRERVQWYTSMVGKFSSVATLLNILHEEGNKNWAVAEFVQGSKTRRWAIGWSW 177
Query: 345 V 345
+
Sbjct: 178 M 178
>gi|239610405|gb|EEQ87392.1| DUF890 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 350
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 8/121 (6%)
Query: 233 VGVVRDGEQFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITR 285
+G+ + DF +CNPPF+ES +E P ++C G EM+ +GGE AF+TR
Sbjct: 58 IGLPESNARLDFTMCNPPFYESRDELISAAKAKQRPPFSACTGAEVEMITAGGEVAFVTR 117
Query: 286 IIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
+I +SV L++ +WYTSMVG+ S++ L++ L + G EFVQG +T RW + WS+
Sbjct: 118 MIRESVKLRERVQWYTSMVGKFSSVATLLNILHEEGNKNWAVAEFVQGSKTRRWAIGWSW 177
Query: 345 V 345
+
Sbjct: 178 M 178
>gi|67541086|ref|XP_664317.1| hypothetical protein AN6713.2 [Aspergillus nidulans FGSC A4]
gi|40739341|gb|EAA58531.1| hypothetical protein AN6713.2 [Aspergillus nidulans FGSC A4]
Length = 264
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 14/124 (11%)
Query: 246 ICNPPFFESMEEAGLNPK-------TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+CNPPF+ S +E + K ++C G EMV GGE +F++RI+ +S+AL+
Sbjct: 1 MCNPPFYSSQDEMVASAKDKDRPPFSACTGAEIEMVTRGGEVSFVSRIVTESIALQDKVL 60
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF------VPPARKI 351
WYTSM+G+ S++ LI +L ++G T TEFVQG +T RW +AWS+ V AR I
Sbjct: 61 WYTSMLGKLSSVSTLIERLIELGNTNYAVTEFVQGNKTRRWAIAWSWADRRPAVSVARGI 120
Query: 352 ISPH 355
SP+
Sbjct: 121 KSPN 124
>gi|320168035|gb|EFW44934.1| methyltransferase 10 domain containing [Capsaspora owczarzaki ATCC
30864]
Length = 705
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 84/182 (46%), Gaps = 41/182 (22%)
Query: 17 HPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPR------------------------ 52
H +N Y +PP+F+ LA Y F+ + P+
Sbjct: 164 HRRNVYIASPPNFSQLAEAYAPLRAFLRANNAPAPKQPADNEPPSDQQAEAPGLDTHSPV 223
Query: 53 --------IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSS 104
+D++ A L++ +L D L IPDG L PTVP+R NYI WIE L++
Sbjct: 224 DNKSPEMTLDFSQPRAVAALSQAILHADFKLTVQIPDGTLVPTVPSRLNYILWIESLVTL 283
Query: 105 NIIPTTSRNGDK--------VKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWA 155
+ TT R D V G DIGTGA CIYPL+ SL WSFV +D+ +L+ A
Sbjct: 284 HRRATTKRQKDSHGEATKQPVSGIDIGTGATCIYPLMATSLFPDWSFVATDINPDSLQHA 343
Query: 156 EK 157
++
Sbjct: 344 KQ 345
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESME-------EAGLNP-------------------KT 264
+L G + + DF +CNPPF+E+++ E+ P K
Sbjct: 368 LLHGALGEAGTCDFVMCNPPFYETLDHVPFANSESTTAPASRNNDEPGPPRRRVRPQTKL 427
Query: 265 SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324
+ E V SGGE F+ ++I++S AL+ WYTS++G KS+L L +L
Sbjct: 428 AAAALITETVTSGGEVEFVRQLIKESEALQTRITWYTSLLGHKSSLVTLFKELHGRTDIA 487
Query: 325 VKTTEFVQGQTCRWGLAWSFV 345
V TE QG+T RW +AW+++
Sbjct: 488 VTWTELRQGRTIRWVIAWTYL 508
>gi|409045096|gb|EKM54577.1| hypothetical protein PHACADRAFT_258520 [Phanerochaete carnosa
HHB-10118-sp]
Length = 266
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 246 ICNPPFFESMEEA-------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+CNPPF+ S EE L P C G EM+ GGE AF+ R++++S+ LK
Sbjct: 1 MCNPPFYSSREEVLSSAEAKELGPSGICTGAETEMITPGGEAAFVRRMVQESLQLKDRCC 60
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
W+TSM+G+ S+L +I L+ V TEFVQG+T RW +AWSF
Sbjct: 61 WFTSMLGKMSSLTDVIQSLKSEKVDNYAITEFVQGKTRRWAIAWSF 106
>gi|119482958|ref|XP_001261507.1| hypothetical protein NFIA_026840 [Neosartorya fischeri NRRL 181]
gi|119409662|gb|EAW19610.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 335
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 116/261 (44%), Gaps = 65/261 (24%)
Query: 123 GTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181
GTG IYPLLG + W F +D+ + + A +NV +N + I + K + ++
Sbjct: 10 GTGCCSIYPLLGCTTRPLWDFFATDIDNENVRTARENV-TNNGLDGRIRVFKTERTDDLI 68
Query: 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241
+ L G+ R
Sbjct: 69 PLDTKL----------------------------------------------GIQR--YV 80
Query: 242 FDFCICNPPFFESMEEAGLN-------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
DF +CNPPF+ S EE + P ++C G EMV GGE AF+ R+IE+S+ L+
Sbjct: 81 LDFTMCNPPFYSSREEMIASAEAKERPPFSACTGDEVEMVTEGGEIAFVYRMIEESLQLR 140
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF--VPPARKI 351
+ WYTSM+G+ S++ ++ KL + G TEFVQG +T RW +AWS+ + P+ K+
Sbjct: 141 ERVVWYTSMLGKLSSVSVIVEKLMEHGNNNYAVTEFVQGSKTKRWAVAWSWTDLRPSMKV 200
Query: 352 ISPHVAEKKNL-----SFMLE 367
K+L FMLE
Sbjct: 201 ARGIPGFPKHLLPFPSEFMLE 221
>gi|225684577|gb|EEH22861.1| predicted protein [Paracoccidioides brasiliensis Pb03]
Length = 390
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 241 QFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
+ DF +CNPPF+ES EE P ++C G EM+ +GGE F+TR+I++S+ L
Sbjct: 102 RLDFTMCNPPFYESREELISAARKKQRPPFSACTGAEVEMITTGGEIEFVTRLIKESIQL 161
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PARK 350
+ +WYTSMVG+ S++ L++ L G EFVQG +T RWG+ WS++ P+
Sbjct: 162 RDRVQWYTSMVGKFSSVATLVNTLHDEGNKNWAIAEFVQGTKTRRWGIGWSWMDYRPSTD 221
Query: 351 IISPH 355
I P
Sbjct: 222 IARPR 226
>gi|322697841|gb|EFY89616.1| DUF890 domain-containing protein [Metarhizium acridum CQMa 102]
Length = 312
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 240 EQFDFCICNPPFFESMEEAGLN-------PKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
E DF + NPPF+ S E+ + P T+C G+ EMV GGE AF+ ++E+S A
Sbjct: 46 ESIDFTMTNPPFYMSEEDLLSSAKKKQRPPYTACTGSKTEMVTPGGELAFVVCMLEESCA 105
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVP--PAR 349
L+ +WY++M G SNL I +LR G+ TEFVQG +T RW +AWSF P PA+
Sbjct: 106 LRARVQWYSAMFGFLSNLVDFIEQLRSSGIENYAVTEFVQGNKTRRWAIAWSFQPMRPAQ 165
Query: 350 KI 351
+
Sbjct: 166 YV 167
>gi|84997493|ref|XP_953468.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304464|emb|CAI76843.1| hypothetical protein, conserved [Theileria annulata]
Length = 456
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 164/435 (37%), Gaps = 148/435 (34%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRP--------RIDWTDFNATRELTRVLLLHDHGLNWWI 79
DF +L+ +P + + + +P D+ ++ L++ +L H++GL ++
Sbjct: 44 DFLVLSKYFPFLKKHMILNLRWKPFMPKSSSYHYDFNHPDSVYHLSKAILKHNYGLELYL 103
Query: 80 PDG------------------------------QLCPTVPNRSNYIHWIEDLL-----SS 104
P L P VPNR YI I LL S
Sbjct: 104 PCSCEEDSCNLNKDLDVLNKYFKDLSASSNFIRYLAPCVPNRLGYIRAISSLLCLKNNES 163
Query: 105 NI--IPTTSRNGDK-----VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157
+I I + N D+ + DIGTGA+CIYPL+G S W+F+G+D+ ++ LE A +
Sbjct: 164 HISDIEAHNINSDEQLKLNIIVLDIGTGASCIYPLIGTSENSWNFIGTDIDNLTLELARE 223
Query: 158 NVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFN 217
NV+ N H+ + I +R + TP++
Sbjct: 224 NVEIN-HLEDRINLRL----QRTPTL---------------------------------- 244
Query: 218 LPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV--- 274
+ ++ E +CNPPF S+E LNP+T GT E+V
Sbjct: 245 -------------IFNSILYSHELVAMTMCNPPFHSSLEMTNLNPRTFSTGTERELVFSI 291
Query: 275 -----------------CSG----------------GERAFITRIIEDSVALKQTFRWYT 301
C+G G+ AFI ++++S W+T
Sbjct: 292 SEDTNLSTEQSYMDNIECNGNSTVTGQLKLMLSEKHGDLAFIEIMLQESKLYCHNIVWFT 351
Query: 302 SMVGRKSNLK----FLISKLRKVGVTIVKTTEFVQGQTCRW---GLAWSFVP-PARKII- 352
++V R S LK + ++R + V+ +F+ + G + F P P KI
Sbjct: 352 TLVPRMSTLKKIKNIIHREMRHYNLNHVQQVQFLDSKLHHLYYEGSKFKFAPRPEVKIDV 411
Query: 353 -SPHVAEKKNLSFML 366
+ H+ E + + L
Sbjct: 412 GNLHICEFRKFTLAL 426
>gi|170118145|ref|XP_001890255.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164634801|gb|EDQ99122.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 13/151 (8%)
Query: 16 IHPKNKYSENPPDFALLASLYP-----SFEPFVFY-SRDGRPRIDWTDFNATRELTRVLL 69
+HP+N Y NPPDF LA+ YP + +F SR ++ ++ R+LT+ +L
Sbjct: 1 MHPRNPY-RNPPDFYQLAADYPPLLKQKLKGIIFLVSR----LLNLKSCHSYRQLTQAIL 55
Query: 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCI 129
D GL+ +P +LCP VPNR NY+ WI+D++ ++ S ++G D+GTGA+ I
Sbjct: 56 HRDFGLSISLPKHRLCPPVPNRLNYVLWIQDIMHAH-RHLQSSPSHIIRGIDVGTGASAI 114
Query: 130 YPLLGASL-LGWSFVGSDMTDVALEWAEKNV 159
YPLL L W FV +++ + + +A+ N+
Sbjct: 115 YPLLACKLEPTWEFVATEIDETSHTYAKSNI 145
>gi|352099962|ref|ZP_08957889.1| 23S rRNA mA1618 methyltransferase [Halomonas sp. HAL1]
gi|350601310|gb|EHA17356.1| 23S rRNA mA1618 methyltransferase [Halomonas sp. HAL1]
Length = 212
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 72/250 (28%)
Query: 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176
+K DIGTGAN IYPLL + GW VGSD+ +LE + +NP + + +R
Sbjct: 14 IKLLDIGTGANGIYPLLACQIYGWQCVGSDINAQSLENVATIIANNPTLKDRFTLR---- 69
Query: 177 SESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236
Q + N H+ E G++
Sbjct: 70 ---------------TQHDKN-----HIFE---------------------------GII 82
Query: 237 RDGEQFDFCICNPPFFESMEEA---------------------GLNPKTSCGGTPEEMVC 275
+ E FD +CNPPF S++EA +P + GG E+ C
Sbjct: 83 QPEEFFDVSVCNPPFHASLDEALKGSQLKRNNLARNRGEQKANTKSPTLNFGGMGAELWC 142
Query: 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT 335
GGE+ F+ ++I +S RW++S+V + N+K + K+G + E QG
Sbjct: 143 KGGEQLFLKKLIRESQVYSTQCRWFSSLVSKADNIKPAKKLISKLGAVDSREIEMKQGNK 202
Query: 336 CRWGLAWSFV 345
LAW+F+
Sbjct: 203 VTRILAWTFM 212
>gi|388580497|gb|EIM20811.1| hypothetical protein WALSEDRAFT_60716 [Wallemia sebi CBS 633.66]
Length = 417
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 8/123 (6%)
Query: 229 PPVLVGVVRDGEQFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERA 281
P V++ + + E + +CNPPF+ES+EE PK+ G+ E+V GGE +
Sbjct: 166 PSVVIDNISENE-INCQLCNPPFYESIEEIKHLENFKSTKPKSMNLGSFNEIVTEGGETS 224
Query: 282 FITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341
F++ +I++S+ ++ F+WY+S++G+ S+L+ LI+KLR++ V E G T RW LA
Sbjct: 225 FVSNLIDESLNNQRLFKWYSSLLGKFSSLEVLINKLRQLNVNNYALKEITLGSTRRWVLA 284
Query: 342 WSF 344
WSF
Sbjct: 285 WSF 287
>gi|409045095|gb|EKM54576.1| hypothetical protein PHACADRAFT_258519 [Phanerochaete carnosa
HHB-10118-sp]
Length = 129
Score = 92.4 bits (228), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y P DF LA YP+ +PF+ G I++ D A R LT+ LLL D GL
Sbjct: 1 MHPQNPY-RTPLDFIALAEAYPNLKPFLKKGSTGVV-INFQDEAAQRCLTKALLLCDFGL 58
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG 134
+ +P +LCP VPNR NYI WI+D++ + V+ DIGTGA+ IYPLLG
Sbjct: 59 SLDLPPDRLCPPVPNRLNYILWIQDIMGA--CARREPTHGVVRCVDIGTGASAIYPLLG 115
>gi|302658351|ref|XP_003020880.1| hypothetical protein TRV_05018 [Trichophyton verrucosum HKI 0517]
gi|291184749|gb|EFE40262.1| hypothetical protein TRV_05018 [Trichophyton verrucosum HKI 0517]
Length = 254
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
Query: 246 ICNPPFFESMEEAGL-------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+CNPPF+ES EE P + C G EM+ GGE AF+ ++I++S+ L++ R
Sbjct: 1 MCNPPFYESHEEMKQLAEEKQNEPLSVCTGAETEMITPGGEVAFVKKMIQESLHLREAVR 60
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
WYTSM+G++S+L LI +L+ + TEF+QG +T RW +AWS+
Sbjct: 61 WYTSMLGKRSSLLSLIDELQSLDNKNWAVTEFIQGDKTKRWAIAWSW 107
>gi|302502278|ref|XP_003013130.1| hypothetical protein ARB_00675 [Arthroderma benhamiae CBS 112371]
gi|291176692|gb|EFE32490.1| hypothetical protein ARB_00675 [Arthroderma benhamiae CBS 112371]
Length = 254
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
Query: 246 ICNPPFFESMEEAGL-------NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+CNPPF+ES EE P + C G EM+ GGE AF+ ++I++S+ L++ R
Sbjct: 1 MCNPPFYESHEEMKQLAEEKQNEPLSVCTGAETEMITPGGEVAFVKKMIQESLHLREEVR 60
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
WYTSM+G++S+L LI +L+ + TEF+QG +T RW +AWS+
Sbjct: 61 WYTSMLGKRSSLLSLIDELQSLDNKNWAVTEFIQGDKTKRWAIAWSW 107
>gi|124297683|gb|AAI31879.1| Mett10d protein [Danio rerio]
Length = 141
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
++HP+N+Y + PPDF LAS YP F+ V + GR +++ D A R LT LL D G
Sbjct: 6 SMHPRNRYKDKPPDFVYLASKYPEFQRHVQTTLTGRVTLNFKDPEAVRALTCTLLKEDFG 65
Query: 75 LNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127
L IP +L PTVP R NYIHW+EDL+ G+ +G DIG A
Sbjct: 66 LTIEIPLERLIPTVPLRLNYIHWVEDLIGG--------QGNPQRGIDIGMPAQ 110
>gi|347838249|emb|CCD52821.1| hypothetical protein [Botryotinia fuckeliana]
Length = 138
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPT 87
DF L + P F + ++D++D + ++LT+ LL D GLN +P+ +LCP
Sbjct: 13 DFVALGNEDPDFGKLL----KSNGQLDFSDPKSVQQLTKSLLKRDFGLNLTLPEDRLCPP 68
Query: 88 VPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG-ASLLGWSFVG 144
VPNR NYI W+++L+ SS+ + +V G DIGTGA+CIYPLLG A W F G
Sbjct: 69 VPNRLNYIVWLQELIDTSSDDYTDSYNPNRQVHGLDIGTGASCIYPLLGCAQRASWRFTG 128
Query: 145 SDMT 148
+ M+
Sbjct: 129 TGMS 132
>gi|312959163|ref|ZP_07773682.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
fluorescens WH6]
gi|311286933|gb|EFQ65495.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
fluorescens WH6]
Length = 165
Score = 88.6 bits (218), Expect = 6e-15, Method: Composition-based stats.
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHG 74
T+HP+N+++ DF L P FV + G+ ID+ +A R R LL +G
Sbjct: 30 TLHPRNRHT-GRYDFPALIKTTPELAQFVILNPYGKESIDFASPDAVRVFNRALLKSFYG 88
Query: 75 LNWW-IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
+ W IP LCP VP R++Y+H++ DLL+S R G VK DIG GANC+YPL+
Sbjct: 89 IQHWDIPADYLCPPVPGRADYVHFLADLLASTNDGKIPR-GSIVKVLDIGMGANCVYPLI 147
Query: 134 GASLLGWSFVG 144
G W+ G
Sbjct: 148 GT----WNTAG 154
>gi|440634162|gb|ELR04081.1| hypothetical protein GMDG_06583 [Geomyces destructans 20631-21]
Length = 304
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 242 FDFCICNPPFFES----MEEAGLN---PKTSCGGTPEEMVCSGGERAFITRIIEDSVALK 294
DF + NPPFF S + A L P + C G EMV GGE AF+ R+I +SV L
Sbjct: 132 IDFTLTNPPFFTSSSDLLASATLKSRPPSSVCTGAQSEMVSPGGETAFVARMIAESVPLG 191
Query: 295 QTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
Q RW+T+ +G+ ++ ++++L+K GV E VQG+T RW + WS
Sbjct: 192 QRVRWFTAQLGKLGSVATVVAELKKAGVKNWALGELVQGRTKRWVVGWS 240
>gi|115399912|ref|XP_001215545.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191211|gb|EAU32911.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 250
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 13/126 (10%)
Query: 246 ICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+CNPPF+ S EE P ++C G EMV +GGE F++R+I++S+ L++
Sbjct: 1 MCNPPFYTSREEMIGAAQAKERPPFSACTGAEVEMVTTGGEVEFVSRMIDESLNLREKVL 60
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSFVPPARKIISPHVA 357
WYTSM+G+ S++ L+ KL + G TEFVQG +T RW +AWS+ + P V
Sbjct: 61 WYTSMLGKLSSVSVLVEKLIECGNHNYAVTEFVQGSKTKRWAIAWSWAD-----LRPTVG 115
Query: 358 EKKNLS 363
+N++
Sbjct: 116 VARNIT 121
>gi|409081670|gb|EKM82029.1| hypothetical protein AGABI1DRAFT_36131 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 226
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 60/245 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFN--ATRELTRVLLLHDH 73
+H +N YS P + LA YP P + + G I +F R LT+ LL D
Sbjct: 1 MHRRNIYSR-PIQYEELARSYP---PLLEHKLRGVYDIS-KNFTLLICRCLTQALLYRDF 55
Query: 74 GLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
L +P +LCP VPNR NY+ WI+D++ ++ + ++G DIGTGA+ IYPLL
Sbjct: 56 KLQLSLPKDRLCPPVPNRLNYVLWIQDIIRAHRY-LFREDIRTIRGIDIGTGASAIYPLL 114
Query: 134 GASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L W F+ +++ +++ +AE+N++ N +
Sbjct: 115 ACKLEPSWCFIATEVDNLSFTYAERNIQLN----------------------------KM 146
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+D + M +D F L Y GPP FDF +CNPPF+
Sbjct: 147 EDHIRL-MRASID------GPILFPL-----EDYMGPP-----------FDFVMCNPPFY 183
Query: 253 ESMEE 257
S E
Sbjct: 184 SSRTE 188
>gi|56753878|gb|AAW25136.1| SJCHGC03211 protein [Schistosoma japonicum]
Length = 140
Score = 87.4 bits (215), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y + P+F LA+ + F+ GR +D+ + L++ LL+ D GL
Sbjct: 7 MHQRNIYKQRKPNFKELAAQFDFFDAVAVKDECGRVMLDFRTPSHLAALSKALLMKDFGL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
N P +L PTVP R NYI W+EDL I R ++ DIG G++CIYPLLG+
Sbjct: 67 NVNFPSDRLIPTVPLRLNYILWLEDL-----IKDLKRFSGRINILDIGVGSSCIYPLLGS 121
Query: 136 SLLGW 140
W
Sbjct: 122 KKNSW 126
>gi|422665302|ref|ZP_16725174.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
pv. aptata str. DSM 50252]
gi|330975720|gb|EGH75786.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 175
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 17/137 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G++ E+F +CNPPF S+EEA P + GG +E+
Sbjct: 36 ILLGLLDSSERFHVSLCNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 95
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K GV VK E QG
Sbjct: 96 WCDGGEIGFVTQLIQESALLPSQVAWFSTLVSKASNLPPIQSALKKAGVLEVKVVEMGQG 155
Query: 334 QTCRWGLAWSFVPPARK 350
Q +AW+F+ A++
Sbjct: 156 QKQSRFVAWTFLDKAQR 172
>gi|350635452|gb|EHA23813.1| hypothetical protein ASPNIDRAFT_181005 [Aspergillus niger ATCC
1015]
Length = 252
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 246 ICNPPFFESMEEAGLN-------PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFR 298
+CNPPF+ S +E + P ++C G EMV +GGE AFITR+IE+S+ L++
Sbjct: 1 MCNPPFYASRDELIASAEAKERPPFSACTGAEVEMVTTGGEIAFITRMIEESLRLRERVI 60
Query: 299 WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLAWSF 344
WYT+M+G+ S++ LI L + TEFVQG +T RW +AWS+
Sbjct: 61 WYTTMLGKLSSVSVLIETLLEHKNNNYAVTEFVQGNKTRRWAIAWSW 107
>gi|429329919|gb|AFZ81678.1| protein of unknown function DUF890 domain-containing protein
[Babesia equi]
Length = 463
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 146/392 (37%), Gaps = 141/392 (35%)
Query: 15 TIHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRI--------DWTDFNATRELTR 66
++HP++K++ DF L+ + P + + + +P++ D+T +A L++
Sbjct: 28 SMHPRSKHTMKH-DFLSLSRILPVLKKHMTLNLKWKPKMPKYLMYHFDFTHPDAVYHLSK 86
Query: 67 VLLLHDHGLNWWIPDG------------------------------QLCPTVPNRSNYIH 96
+L + L++++P G L P VPNR NYIH
Sbjct: 87 AILKCIYNLDFYLPCGCPNGCCDSEFESELPMETPQVDCSDFVFERYLAPCVPNRVNYIH 146
Query: 97 WIEDLLS----------SNIIPTTS-RNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGS 145
DLL +++IP G + DIGTGANCIYPLLG + W+F+G
Sbjct: 147 HAADLLKLENNSYDGYLNSVIPLNKILTGGHIVVMDIGTGANCIYPLLGTAEYSWNFIGV 206
Query: 146 DMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMD 205
D+ + +L A KNV N ++ + I +R DN S M G
Sbjct: 207 DIDEESLALARKNVFLN-NLEKKITLRLQDNPIS--------------------MFG--- 242
Query: 206 EEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTS 265
GV+ E + NPPF S++E NP+T
Sbjct: 243 ----------------------------GVICSYELICLTLSNPPFHSSIKEINQNPRTI 274
Query: 266 CGGTPEEMVCS---------------------------------------GGERAFITRI 286
G E++ + GE AFI +
Sbjct: 275 TLGKKNEIIFTQSQFSVHLLKAKYLDCLDNSENCMIRGTVKYTFSEDCMEHGELAFIEIM 334
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLR 318
+ +S W+TS+V + S LK + K++
Sbjct: 335 LLESRLYAFNVLWFTSLVAKLSTLKKIKRKIQ 366
>gi|289678203|ref|ZP_06499093.1| putative SAM-dependent methyltransferase [Pseudomonas syringae pv.
syringae FF5]
Length = 161
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 17/137 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G++ E+F +CNPPF S+EEA P + GG +E+
Sbjct: 22 ILLGLLDSSERFHASLCNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 81
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K GV VK E QG
Sbjct: 82 WCDGGEIGFVTQLIQESALLPSQVAWFSTLVSKASNLPPIQSALKKAGVLEVKVVEMGQG 141
Query: 334 QTCRWGLAWSFVPPARK 350
Q +AW+F+ A++
Sbjct: 142 QKQSRFVAWTFLDKAQR 158
>gi|426196902|gb|EKV46830.1| hypothetical protein AGABI2DRAFT_71717 [Agaricus bisporus var.
bisporus H97]
Length = 246
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 60/245 (24%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFN--ATRELTRVLLLHDH 73
+H +N YS P + LA YP P + + G I +F R LT+ LL D
Sbjct: 1 MHRRNIYSR-PIQYEELARSYP---PLLEHKLRGVYHIS-KNFTLLICRCLTQALLYRDF 55
Query: 74 GLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133
L +P +LCP VPNR NY+ WI+D++ ++ + ++G DIGTGA+ IYPLL
Sbjct: 56 KLQLSLPKDRLCPPVPNRLNYVLWIQDIIRAHRY-LFREDIRTIRGIDIGTGASAIYPLL 114
Query: 134 GASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSV 192
L W F+ +++ +++ +AE+N++ N +
Sbjct: 115 ACKLEPLWCFIATEVDNLSFTYAERNIQLN----------------------------KM 146
Query: 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF 252
+D + M +D F L Y GPP FDF +CNPPF+
Sbjct: 147 EDHIRL-MRASID------GPILFPL-----EDYIGPP-----------FDFVMCNPPFY 183
Query: 253 ESMEE 257
S E
Sbjct: 184 SSRTE 188
>gi|398391452|ref|XP_003849186.1| hypothetical protein MYCGRDRAFT_24632, partial [Zymoseptoria
tritici IPO323]
gi|339469062|gb|EGP84162.1| hypothetical protein MYCGRDRAFT_24632 [Zymoseptoria tritici IPO323]
Length = 414
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 15/118 (12%)
Query: 240 EQFDFCICNPPFFESM------------EEAGLNPKTSCGGTPEEMVCSGGERAFITRII 287
E+ DF + NPPF++S +E+G P + G EM+ GG+ AF+ RI+
Sbjct: 168 EELDFIMTNPPFYDSHADFLAATKRSVDDESGPTPVLT--GADNEMIYPGGDVAFVLRIL 225
Query: 288 EDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ-TCRWGLAWSF 344
+DS+ L++ +WYT+M+ + S+L+ +++KL++ G+T T G+ T RWGLAWSF
Sbjct: 226 QDSLKLRERVQWYTAMLSKLSSLQQVLAKLKEEGITNFAVTSLQPGRGTKRWGLAWSF 283
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 22 YSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPD 81
YS++ DF LA P F + ++ + ID+ + ++L+ LL D L +P
Sbjct: 1 YSQDV-DFDQLAKSSPDFAAIIAPAKR-KGFIDFKNPKVVQQLSISLLQQDFSLQLTLPQ 58
Query: 82 GQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL- 138
+LCP +P R NY+ WI+DLL SS T +V G DIG GA+CIY LL S
Sbjct: 59 NRLCPPIPVRWNYVRWIQDLLDTSSPTYRDTPDPAREVTGLDIGVGASCIYALLACSTRE 118
Query: 139 GWSFVGSDMTDVALEWAEKNVKS---------------NPHIS-ELIEIRKVDNSESTPS 182
W +G+D+ +L A +NVK NP + +++++ ++D + P
Sbjct: 119 KWRMLGTDVDAHSLACATRNVKDNGLEKRVKLKQMSPENPLLPLDMLKVEELDFIMTNPP 178
Query: 183 IQES------LTGKSVQDESNMD--MSGHMDEEAEPSSSSSFNL 218
+S T +SV DES ++G +E P +F L
Sbjct: 179 FYDSHADFLAATKRSVDDESGPTPVLTGADNEMIYPGGDVAFVL 222
>gi|213404836|ref|XP_002173190.1| DUF890 domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001237|gb|EEB06897.1| DUF890 domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 397
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 238 DGEQFDFCICNPPFFESMEEAG------LNPKTSCGGTPEEMVCSGGERAFITRIIEDSV 291
+G F +CNPPF+ ++EEA +P C G P EMV GGE F+ RI+ +S+
Sbjct: 122 NGCNLSFTMCNPPFYATIEEAKNTTQKLTSPYAVCTGAPNEMVTKGGETEFVLRILRESL 181
Query: 292 ALKQTFR--------WYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343
+ R WYT M+G+ S ++ ++ +LR V E + GQT RW +AWS
Sbjct: 182 QQDERRRQEHKSHLTWYTCMLGKLSTVERIVVELRASSVNNYALHELIPGQTKRWIIAWS 241
Query: 344 F 344
F
Sbjct: 242 F 242
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTD 149
R YI +I +LL S T + V G DIGTGA CIYPLLG A+ W F +D+ +
Sbjct: 27 RHMYITFINELLCS----TCEHAPETVFGLDIGTGATCIYPLLGCATYTNWIFYATDIDE 82
Query: 150 VALEWAEKNVKSN 162
+L A N++ N
Sbjct: 83 TSLVRAAFNIRRN 95
>gi|116196958|ref|XP_001224291.1| hypothetical protein CHGG_05077 [Chaetomium globosum CBS 148.51]
gi|88180990|gb|EAQ88458.1| hypothetical protein CHGG_05077 [Chaetomium globosum CBS 148.51]
Length = 292
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 240 EQFDFCICNPPFF-------ESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292
+ DF + NPPF+ S ++ P ++C G P EMVC GGE A + R++ +S+
Sbjct: 162 QSIDFVMMNPPFYTSEDDMVSSAKKKARPPMSACTGAPVEMVCEGGEVAHVGRLLRESLV 221
Query: 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
L+ +WYTSM G+ ++L L+ +LR+ G+ TEFVQG
Sbjct: 222 LRSRIQWYTSMFGKLTSLDALVEQLREHGIDNYAVTEFVQG 262
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 27 PDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCP 86
PDF LA F +G+ +D++D AT +LTR LL D GL +P+ +LCP
Sbjct: 49 PDFRRLAKRDSHFA--AVLQDNGQ--LDFSDPKATMQLTRTLLGLDFGLKLDLPEDRLCP 104
Query: 87 TVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGS 145
G K+ G D+GTGA+CIYPLLG + W FV +
Sbjct: 105 P-------------------------PGRKLCGLDVGTGASCIYPLLGTAQRPWHFVAT 138
>gi|422600743|ref|ZP_16674415.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
pv. mori str. 301020]
gi|330893213|gb|EGH25874.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. mori
str. 301020]
Length = 149
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 19/142 (13%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G++ E+F +CNPPF S++EA P + GG +E+
Sbjct: 10 ILLGLLDSSERFHVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 69
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K G VK E QG
Sbjct: 70 WCEGGEIGFVTQLIQESAILPGQVVWFSTLVSKASNLPPIQSALKKAGALEVKVIEMGQG 129
Query: 334 QTCRWGLAWSFVPPARKIISPH 355
Q +AW+F+ A++ +PH
Sbjct: 130 QKQSRFVAWTFLDKAQR--TPH 149
>gi|422600704|ref|ZP_16674394.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
pv. mori str. 301020]
gi|330893192|gb|EGH25853.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. mori
str. 301020]
Length = 143
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 19/142 (13%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G++ E+F +CNPPF S++EA P + GG +E+
Sbjct: 4 ILLGLLDSSERFHVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 63
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K G VK E QG
Sbjct: 64 WCEGGEIGFVTQLIQESAILPGQVVWFSTLVSKASNLPPIQSALKKAGALEVKVIEMGQG 123
Query: 334 QTCRWGLAWSFVPPARKIISPH 355
Q +AW+F+ A++ +PH
Sbjct: 124 QKQSRFVAWTFLDKAQR--TPH 143
>gi|422634795|ref|ZP_16699575.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
Cit 7]
gi|330955684|gb|EGH55944.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae Cit 7]
Length = 175
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 19/142 (13%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G++ E+F +CNPPF S+EEA P + GG +E+
Sbjct: 36 ILLGLLDSSERFHVSLCNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 95
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K VK E QG
Sbjct: 96 WCEGGEIGFVTQLIQESATLPGQVVWFSTLVSKASNLPPIQSALKKADALEVKVVEMGQG 155
Query: 334 QTCRWGLAWSFVPPARKIISPH 355
Q +AW+F+ A++ +PH
Sbjct: 156 QKQSRFVAWTFLDKAQR--TPH 175
>gi|422634791|ref|ZP_16699573.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
Cit 7]
gi|330955682|gb|EGH55942.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae Cit 7]
Length = 171
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 19/142 (13%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN-----------------PKTSCGGTPEEM 273
+L+G++ E+F +CNPPF S+EEA P + GG +E+
Sbjct: 32 ILLGLLDSSERFHVSLCNPPFHASLEEAQRGSQRKWRALGKADPKRKLPVLNFGGQSQEL 91
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I++S L W++++V + SNL + S L+K VK E QG
Sbjct: 92 WCEGGEIGFVTQLIQESATLPGQVVWFSTLVSKASNLPPIQSALKKADALEVKVVEMGQG 151
Query: 334 QTCRWGLAWSFVPPARKIISPH 355
Q +AW+F+ A++ +PH
Sbjct: 152 QKQSRFVAWTFLDKAQR--TPH 171
>gi|358056796|dbj|GAA97146.1| hypothetical protein E5Q_03821 [Mixia osmundae IAM 14324]
Length = 343
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 67/260 (25%)
Query: 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA-SLLGWSFVGSDMTDVA 151
+Y+ W+ LL ++ P+ N + D+GTGA+ IY LL A S +D+ +
Sbjct: 9 DYVQWLLALLEASP-PSPKAN---LLLLDVGTGASAIYALLLARSSPKAHIFATDVDAFS 64
Query: 152 LEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPS 211
L+ A +N++ N ++Q+ +T + ++D+ H+D E
Sbjct: 65 LKIARRNIEQN-------------------ALQDRIT--LIDTSLSVDILPHLDVE---- 99
Query: 212 SSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE----AGLN---PKT 264
D +CNPP++ S E A + P
Sbjct: 100 ------------------------------IDASMCNPPYYASRAEIEELASIKADLPTG 129
Query: 265 SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324
C G +M+ +GGE F+TR+I++S A RW T+ +GR S+L+ L+ +L +
Sbjct: 130 ICTGADSDMITTGGELGFVTRMIDESAARPNAIRWCTTQLGRLSSLEPLLKRLAHHHIDN 189
Query: 325 VKTTEFVQGQTCRWGLAWSF 344
E Q +T RW LAWS
Sbjct: 190 YALCESTQSRTKRWLLAWSL 209
>gi|154282151|ref|XP_001541888.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412067|gb|EDN07455.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 178
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 7/101 (6%)
Query: 241 QFDFCICNPPFFESMEE-------AGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
+ DF +CNPPF++S +E P ++C G EM+ GGE F+TR+I +S+ L
Sbjct: 60 RLDFTMCNPPFYQSRDELISSAKAKQRPPFSACTGAEVEMITPGGEVEFVTRMIRESIEL 119
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ 334
+ +WYTSMVG+ S++ L++ LRK G EFVQG+
Sbjct: 120 RNHVQWYTSMVGKFSSVATLLNILRKEGNGNWAVAEFVQGR 160
>gi|154309009|ref|XP_001553839.1| hypothetical protein BC1G_07399 [Botryotinia fuckeliana B05.10]
Length = 323
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 262 PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321
P T+C G+ EMVC GGE +F++++I +S+ L+ +WYTSM+G+ S+L +I +L++
Sbjct: 94 PFTACTGSETEMVCKGGEVSFVSQMIVESLQLRDGVQWYTSMLGKFSSLSKVIEQLKEYK 153
Query: 322 VTIVKTTEFVQG-QTCRWGLAWSF 344
V TEF+QG +T RW +AWSF
Sbjct: 154 VDNYAVTEFIQGTRTRRWAVAWSF 177
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 80 PD-GQLCPTVPNRSNYIHWIEDLL--SSNIIPTTSRNGDKVKGFDIGTGANCIYPLLG-A 135
PD G+L PT+P W+++L+ SS+ + +V G DIGTGA+CIYPLLG A
Sbjct: 22 PDFGKLRPTLPTV-----WLQELIDTSSDDYTDSYNPNRQVHGLDIGTGASCIYPLLGCA 76
Query: 136 SLLGWSFVGS 145
W F G+
Sbjct: 77 QRASWRFTGT 86
>gi|312959162|ref|ZP_07773681.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
fluorescens WH6]
gi|311286932|gb|EFQ65494.1| Ribosomal RNA large subunit methyltransferase F [Pseudomonas
fluorescens WH6]
Length = 189
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEA------------GLNPKTSC-----GGTPEEM 273
+L+G++ E+FD +CNPPF SM+EA +PK GG E+
Sbjct: 44 ILLGLLEPAERFDLTMCNPPFHASMDEATKGSERKWRALGKADPKRKLPVLNFGGQSAEL 103
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C GGE F+T++I +S W++++V + SNL + + L+K GV + E QG
Sbjct: 104 WCEGGEARFVTQLIAESAHFAHKVLWFSTLVSKASNLPAIETALKKAGVLESQVVEMSQG 163
Query: 334 QTCRWGLAWSF 344
Q +AW+F
Sbjct: 164 QKQSRFVAWTF 174
>gi|221041372|dbj|BAH12363.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 25/161 (15%)
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
+ GGE F+ RII DS+ LK+ RWY+ M+G+K +L L +LR GV V TEF QG
Sbjct: 1 MAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQG 60
Query: 334 QTCRWGLAWSFV-------PPA--RKIISPHVAEKKNLSFMLEGVQRQFSALDVLQSIET 384
+T RW LAWSF PP+ RK+ P +K ++F+ VL S+
Sbjct: 61 RTMRWALAWSFYDDVTVPSPPSKRRKLEKP----RKPITFV------------VLASVMK 104
Query: 385 FFSASGASCKLNASSFTVNITVSNDQCNTILKNEVNRVDEG 425
S + + + V +T ++ T LK + RV G
Sbjct: 105 ELSLKASPLRSETAEGIVVVTTWIEKILTDLKVQHKRVPCG 145
>gi|291084549|ref|ZP_06570857.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
Length = 100
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+W IP G LCP VP R++YIH + DLL TT + D+G ANCIYPL+G
Sbjct: 9 HWDIPPGFLCPPVPGRADYIHHLADLLGE----TTGSIPAQATILDVG--ANCIYPLIGV 62
Query: 136 SLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173
GW F GS+++D A+ A+ +++N +S I +R+
Sbjct: 63 HEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRR 100
>gi|403223583|dbj|BAM41713.1| uncharacterized protein TOT_040000094 [Theileria orientalis strain
Shintoku]
Length = 460
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 166/422 (39%), Gaps = 116/422 (27%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRI--------DWTDFNATRELTRVLLLHDHGLNWWI 79
DF LL+ YP + + + +P++ D+ ++ L++ +L H++ + ++
Sbjct: 40 DFLLLSKHYPILKKHMTLNLKWKPKMPKSSMYHYDFNHQDSVYHLSKAILKHNYNMKLYL 99
Query: 80 P-------------------------------DGQLCPTVPNRSNYIHWIEDLLS----- 103
P + L P VPNR +YI + LLS
Sbjct: 100 PCECSIEESCNMDKDLDEYNQRLRESTANLELNRFLAPCVPNRVSYIRAVSGLLSMERNS 159
Query: 104 ----SNIIPTTSRN----GDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155
NI S + G +V DIGTGA+CIYPL+G + WSF+G+D+ +ALE A
Sbjct: 160 SEALENINEEYSSDRVLKGSQVVVLDIGTGASCIYPLVGVAENSWSFIGTDIDSLALEVA 219
Query: 156 EKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSS 215
+KN+ N + I++R S T + L + + + H SS
Sbjct: 220 KKNIDLNG-LDGQIKLRL--QSVGTLMFHKVLNSRDFVSLTVCNPPFH-------SSMEK 269
Query: 216 FNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275
N+ S+ ++ V ++ EQ + +S E N S G+ + +
Sbjct: 270 TNVNPRTSSTGRESELVFSVPQNAEQ----TIEQLYMDSQE----NETASVEGSLKHVFS 321
Query: 276 --SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLK---------------------- 311
G+ AFI ++++S W+TS+V + + LK
Sbjct: 322 EEEQGDAAFIEVMLKESKFYCHNVLWFTSLVAKLTTLKKIKALIQKEMRMYMMDHKEQEQ 381
Query: 312 FLISKL-----------------RKVGVTIVKTTEFVQ-----GQTCRWGLAWSFVPPAR 349
FL +K+ +KV V+ + T EF G+ RW +AW++ +
Sbjct: 382 FLSTKVEGLTNENKSIKFTQHTDKKVEVSQIHTCEFRTFTIKLGKQTRWAVAWTYYNSDQ 441
Query: 350 KI 351
++
Sbjct: 442 RM 443
>gi|145495362|ref|XP_001433674.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400793|emb|CAK66277.1| unnamed protein product [Paramecium tetraurelia]
Length = 256
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 122/313 (38%), Gaps = 86/313 (27%)
Query: 32 LASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL-NWWIPDGQLCPTVPN 90
LA YP F ++ S G ID+ + NA EL + ++ + G+ + +P + P +
Sbjct: 19 LAQHYPQFRKYIQISNKGETIIDYKNQNALNELNKSIMDYYFGIREFTVPLTSMVPALGC 78
Query: 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150
R NYI W++ + + P T K +D+GTG + + L L GW +G
Sbjct: 79 RLNYIEWVKLQVDISKFPIT-------KIYDVGTGFSGVLIFLAYRLYGWKGIG------ 125
Query: 151 ALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEP 210
VD SE +++ ++ S H++ E +
Sbjct: 126 -----------------------VDTSE-----------QAINHARSIAQSNHIECEFKV 151
Query: 211 SSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTP 270
F + DG +CNPPF++ EE N
Sbjct: 152 GDLFQF-------------------LEDGM---VTVCNPPFYDDQEEREYNRVIQ----T 185
Query: 271 EEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEF 330
+E GGE +F+ R++E+S K YT+M+GRKS+L KV E
Sbjct: 186 QETFVEGGEVSFVKRMLENST--KNCM--YTTMLGRKSSLNSFQDINEKV--------EL 233
Query: 331 VQGQTCRWGLAWS 343
QG R+ L+W+
Sbjct: 234 HQGNNIRFALSWT 246
>gi|83273481|ref|XP_729417.1| SAM-dependent methyltransferase [Plasmodium yoelii yoelii 17XNL]
gi|23487172|gb|EAA20982.1| putative SAM-dependent methyltransferase [Plasmodium yoelii yoelii]
Length = 554
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 122/314 (38%), Gaps = 76/314 (24%)
Query: 84 LCPTVPNRSNYIHWIEDL--------LSSNIIPTTSRN------------GDKVKGFDIG 123
LCP VP R+NYIH I DL NI RN G+ +K D+G
Sbjct: 181 LCPCVPGRANYIHIIADLTIINSLENYKDNINTYIYRNNNDINNTPILLYGNIIKVLDVG 240
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN----------PHISELIEIRK 173
GANCIYPLLG + WSF+G D+ +L+++ N+ N H I +
Sbjct: 241 VGANCIYPLLGNIVYKWSFIGVDINIDSLKYSYINIILNNKENDILLKYQHDKHKIFLNV 300
Query: 174 VDNSESTPSIQESLTGKSVQDESNM----DMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229
+ +S+ + ++ +E N ++ ++DE S +++
Sbjct: 301 IKHSDLYFFTMCNPPYYTLLEEFNKNPFRNVEANIDEVVYYSENNNEENCNDE------- 353
Query: 230 PVLVGVVRDGEQFDFC-----------ICNPPFFESMEEAGLNPKTSCGGTP-------- 270
+ + D ++D C I N + EE +PK TP
Sbjct: 354 ---IANINDDNKYDICNNVSSYNAHEQISNNNKMKENEENYNSPKND-NNTPFIGPRNSN 409
Query: 271 --------EEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKF----LISKLR 318
+ GGE FI ++I +S W+T++V +KSN+K +I +R
Sbjct: 410 MDVKTKDINSHLHKGGEYKFIMKMINESKIFFYNVIWFTTLVSKKSNVKLIKNEIIQSMR 469
Query: 319 KVGVTIVKTTEFVQ 332
V K F+
Sbjct: 470 LYSVHKKKQINFLN 483
>gi|70986928|ref|XP_748950.1| DUF890 domain protein [Aspergillus fumigatus Af293]
gi|66846580|gb|EAL86912.1| DUF890 domain protein [Aspergillus fumigatus Af293]
gi|159123280|gb|EDP48400.1| DUF890 domain protein [Aspergillus fumigatus A1163]
Length = 239
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 262 PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321
P ++C G EMV GGE AF+ R+IE+S+ L++ WYTSM+G+ S++ ++ KL + G
Sbjct: 12 PFSACTGDEVEMVTEGGEIAFVHRMIEESLHLRKRVVWYTSMLGKLSSVSAIVEKLMEYG 71
Query: 322 VTIVKTTEFVQG-QTCRWGLAWSF--VPPARKI 351
TEFVQG +T RW +AWS+ + P+ K+
Sbjct: 72 NNNYAVTEFVQGSKTKRWAVAWSWTDLRPSMKV 104
>gi|393226892|gb|EJD34600.1| hypothetical protein AURDEDRAFT_176350 [Auricularia delicata
TFB-10046 SS5]
Length = 436
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 8/141 (5%)
Query: 26 PPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLC 85
P D+A LA Y +PFV + G ID+++ A R L + L + +P +LC
Sbjct: 4 PVDYAALAEQYEPLKPFVVATARGAA-IDFSNQQAVRVLNQALYWTTLRIRLVLPHNRLC 62
Query: 86 PTVPNRSNYIHWIEDL-LSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGW---S 141
P + NR YI W+++L + + +P + D V DIGTGA+ +YPL+G S W
Sbjct: 63 PPLENRRAYIAWLQELAVYTYPVPRGFTDADNVV-VDIGTGASAVYPLIGCST--WPQVR 119
Query: 142 FVGSDMTDVALEWAEKNVKSN 162
F+ ++ +V+ WA+ N+ +N
Sbjct: 120 FLATERDEVSAHWAQTNIDTN 140
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Query: 244 FCICNPPFFESMEEA------GLNPKTSC-GGTPEEMVCSGGERAFITRIIEDSVA-LKQ 295
F +CNPPF+ S EE P T+ G E + GGE AF+T ++ +S ++
Sbjct: 171 FTMCNPPFYSSAEEMRELAAKKEAPATTVYTGGENESITPGGEVAFVTAMMRESTEHVRD 230
Query: 296 TFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF----VPPARKI 351
WYTSMVG+ S+++ L LR V + FV G T RW +AWSF +P R
Sbjct: 231 RCIWYTSMVGKASSVEHLADFLRANNVDNYAVSRFVAGNTRRWLIAWSFSGIRLPDVR-- 288
Query: 352 ISPH 355
+SPH
Sbjct: 289 VSPH 292
>gi|349803429|gb|AEQ17187.1| putative methyltransferase protein 16 [Pipa carvalhoi]
Length = 103
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 262 PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321
P + G E++ GGE F+ RII DS+ LK+ RWY+ M+G+K +L L +LR +
Sbjct: 12 PSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELR-IQ 70
Query: 322 VTIVKTTEFVQGQTCRWGLAWSF 344
V V TEF QG+T RW LAWSF
Sbjct: 71 VPKVAHTEFYQGRTMRWALAWSF 93
>gi|298208645|ref|YP_003716824.1| hypothetical protein CA2559_10393 [Croceibacter atlanticus
HTCC2559]
gi|83848568|gb|EAP86437.1| hypothetical protein CA2559_10393 [Croceibacter atlanticus
HTCC2559]
Length = 165
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 227 HGPPVLVGVVRDGEQFDFCICNPPFFESMEEA---------GLNPKTSC----GGTPEEM 273
+ + G++ + +QF F +CNPPF+ S ++A LN T GG E+
Sbjct: 35 NNANIFEGIINENDQFTFTMCNPPFYTSEKDAEREALKKLKNLNDTTELKLNFGGQSHEL 94
Query: 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQG 333
C+GGE FI R+I+ S A K W+T++V RK NL L +L+K+ + VK E QG
Sbjct: 95 WCNGGEALFIKRMIKQSAAFKANVTWFTTLVSRKENLPKLEKQLKKLKAS-VKVIEMSQG 153
Query: 334 QTCRWGLAWSF 344
LAW F
Sbjct: 154 HKKSRILAWQF 164
>gi|164661872|ref|XP_001732058.1| hypothetical protein MGL_0651 [Malassezia globosa CBS 7966]
gi|159105960|gb|EDP44844.1| hypothetical protein MGL_0651 [Malassezia globosa CBS 7966]
Length = 212
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 29/168 (17%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y++ +V + DG +W D +A T+ LL D G+
Sbjct: 1 MHPRNVYAQE----------------YVTRNNDGEAPTNWNDEHARCLYTQKLLFRDFGV 44
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLL--------SSNIIPTTSRNGDKVKGFDIGTGAN 127
+ +LCP +P+R NY+HWIED+L + NI TTS V G DIGTG
Sbjct: 45 TCKVTVDRLCPALPSRLNYLHWIEDILEAACPRASTDNIATTTSL---PVCGLDIGTGYL 101
Query: 128 CIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174
IY +L + W +G+D+ AL A+ +V +P L R+V
Sbjct: 102 AIYAILACVMHRDWRMIGTDIDASALGHAQ-HVLDDPANEALDLSRRV 148
>gi|422292744|gb|EKU20046.1| ribosomal rna large subunit methyltransferase f, partial
[Nannochloropsis gaditana CCMP526]
gi|422293044|gb|EKU20345.1| ribosomal rna large subunit methyltransferase f, partial
[Nannochloropsis gaditana CCMP526]
Length = 103
Score = 75.5 bits (184), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTC 336
GGE AF+T +I DS+AL+ RWY+SMVG+K +LK L+ LR+ GV V+TT+F QG+T
Sbjct: 3 GGELAFVTAMILDSLALRDRVRWYSSMVGKKLSLKKLLGLLREAGVQNVRTTQFAQGRTT 62
Query: 337 RWGLAWSF 344
RWG+AWSF
Sbjct: 63 RWGIAWSF 70
>gi|323454240|gb|EGB10110.1| hypothetical protein AURANDRAFT_62666 [Aureococcus anophagefferens]
Length = 4400
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 242 FDFCICNPPFFESMEEAGLNPK--------TSCGGTPEEMVCSGGERAFITRIIEDSVAL 293
+D + NPP+FES E T+ E + GGE AF+ ++ DSVAL
Sbjct: 3409 YDVALTNPPWFESEEARAAAAGGATRADGVTAAATASEAVHEGGGEVAFLRAMVADSVAL 3468
Query: 294 KQTFRWYTSMVGRKSNLKFLISKLR-KVGVTIVKTTEFVQGQTCRWGLAWS 343
RW+++++GR+++LK ++ LR + V V+TT F GQT RW +AW+
Sbjct: 3469 GGRVRWHSALLGRRASLKRALADLRAEPRVLDVRTTRFTLGQTTRWAVAWT 3519
Score = 48.1 bits (113), Expect = 0.011, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSR 112
+DW+ A + R LL D + + L P VPNR Y+ W+ + +
Sbjct: 3273 VDWSLPGARYAVARALLRRDFCVAYEASPRHLVPCVPNRLRYLAWVAAVAGDD------- 3325
Query: 113 NGDKVKGFDIGTGANCIYPLLGASLLGW 140
++ D+G GA+C+ LL A GW
Sbjct: 3326 GSRALRAVDVGAGASCVLALLAARCRGW 3353
>gi|156032818|ref|XP_001585246.1| hypothetical protein SS1G_13815 [Sclerotinia sclerotiorum 1980]
gi|154699217|gb|EDN98955.1| hypothetical protein SS1G_13815 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 219
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ 332
MVC GGE +F++R+I++S+ L+ +WYTSM+G+ S+L +I +L++ V TEFVQ
Sbjct: 1 MVCEGGEVSFVSRMIDESLQLRNQVQWYTSMLGKFSSLSKVIEQLKENKVDNYAVTEFVQ 60
Query: 333 G-QTCRWGLAWSF 344
G +T RW +AWSF
Sbjct: 61 GSKTRRWAVAWSF 73
>gi|417332463|ref|ZP_12116343.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
gi|353581646|gb|EHC42522.1| Ribosomal RNA large subunit methyltransferase F [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
Length = 119
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 55/171 (32%)
Query: 88 VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147
+P R++YIH + DLL TT + D+G GANCIYPL+G GW F GS++
Sbjct: 1 MPGRADYIHHLADLLGE----TTGSIPAQATILDVGVGANCIYPLIGVHEYGWRFTGSEV 56
Query: 148 TDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207
+D A+ A+ +++N +S I +R+ +
Sbjct: 57 SDAAMSSAQAIIQANTGLSRAIRLRR---------------------------------Q 83
Query: 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA 258
+P++ + G++ E +D +CNPPF +S A
Sbjct: 84 KDPAA------------------IFTGIIHKNEFYDATLCNPPFHDSAAAA 116
>gi|221060470|ref|XP_002260880.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810954|emb|CAQ42852.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 550
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 88/244 (36%), Gaps = 98/244 (40%)
Query: 84 LCPTVPNRSNYIHWIEDLLSSNIIP------------------TTSR------------- 112
LCP +P R+NY+H+I DL + +P T+ R
Sbjct: 147 LCPNIPGRANYMHYIADLTALPKVPPEESASEGAKLGDPPGEKTSQRIREVTMEHVDKYA 206
Query: 113 ---------------NGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157
G+++K DIG G+NCIYPLLG + WSFVG D+ +L+
Sbjct: 207 PQSLQINNGEKDTLLRGNQIKVLDIGVGSNCIYPLLGNCIYNWSFVGVDVNLDSLKLCYL 266
Query: 158 NVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFN 217
NV N ++ NM M + +
Sbjct: 267 NVLLN-------------------------------NKENMVMLKYQKD----------- 284
Query: 218 LPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSG 277
A+ +H VV + + F F ICNPPF+ S+ E NP G E+V
Sbjct: 285 ----ARKIFH------NVVNNSDFFFFSICNPPFYSSLNEVNRNPFRKIGAHVNEVVYFD 334
Query: 278 GERA 281
E+
Sbjct: 335 TEQV 338
>gi|399218624|emb|CCF75511.1| unnamed protein product [Babesia microti strain RI]
Length = 441
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 82/197 (41%), Gaps = 58/197 (29%)
Query: 80 PDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRN--GDKVKGFDIGTGANCIYPLLGASL 137
P+ L P +P R Y+ I LL P++ + VK D+GTGA+ IYPLLG
Sbjct: 117 PNRYLSPCIPGRKLYLDTINSLLG----PSSDHKIYNNNVKVLDVGTGASVIYPLLGCCE 172
Query: 138 LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESN 197
GW+FV +D+ D AL A NV N S+++ +RK +N
Sbjct: 173 YGWNFVATDICDDALNIARHNVYINKLESKIV-LRKQNN--------------------- 210
Query: 198 MDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE 257
FN+ GV+ + E + F ICNPPF+ S ++
Sbjct: 211 -----------------PFNMYN-------------GVIDNYEFYHFTICNPPFYSSYDD 240
Query: 258 AGLNPKTSCGGTPEEMV 274
N KT G E++
Sbjct: 241 RRNNFKTHKMGNTRELI 257
>gi|156102288|ref|XP_001616837.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805711|gb|EDL47110.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 548
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 92/246 (37%), Gaps = 97/246 (39%)
Query: 84 LCPTVPNRSNYIHWIEDLLS----------------------SNIIP----------TTS 111
LCP +P R+NY+H+I DL + ++++P T
Sbjct: 147 LCPNIPGRANYMHYIADLTALPRLPGEGASEGANHGAHPSERASVLPLEQLDEWAPPTQQ 206
Query: 112 RNGD---------KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162
NG+ ++K DIG G+NCIYPLLG + WSFVG D+ +L++ N+ N
Sbjct: 207 TNGEEKDALLRGSQIKVLDIGVGSNCIYPLLGNCIYNWSFVGVDVNLDSLKFCYLNILLN 266
Query: 163 PHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGA 222
N ES+ ++
Sbjct: 267 -------------NKESSVVLK-------------------------------------- 275
Query: 223 QSSYHGPP--VLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGER 280
Y P + VV D + F F +CNPPF+ S++E NP + E+V E+
Sbjct: 276 ---YQKDPRKIFNNVVNDKDFFFFTVCNPPFYSSLDEVNRNPFRNIRAHVNEVVYFDAEQ 332
Query: 281 AFITRI 286
T +
Sbjct: 333 VAPTEL 338
>gi|150865483|ref|XP_001384719.2| hypothetical protein PICST_67775 [Scheffersomyces stipitis CBS
6054]
gi|149386739|gb|ABN66690.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 495
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 153/372 (41%), Gaps = 90/372 (24%)
Query: 46 SRDGRPRIDWTDFNATRELTRVLLLHDHGL-NWWIPDGQLCPTVPNRSNYIHWIED-LLS 103
S+ + + D++ + ++T + + G+ N+ + +LCP +PNR Y+ +E+ L+
Sbjct: 53 SKKRKIQYDFSTIDGQYDITEISVREYFGVPNYSLDRTKLCPRIPNRMEYLRIVEECLME 112
Query: 104 SNIIPTTSRNGDKVKG-----------------FDIGTGANCIYPLLGASLLGWSFVGSD 146
+ + T NG ++KG D+GTG++ +YP +G
Sbjct: 113 AEEVRTEFENGCEIKGDEEKCGENTKSGKERWIVDVGTGSSMVYP----------IIGIG 162
Query: 147 MTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDE 206
M D +N I+ +E PS S + E + M +
Sbjct: 163 MND-----------NNRFIA----------TEINPS---SFSHCRTILEDDERMKSRIIL 198
Query: 207 EAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSC 266
+ S + LP + H + +CNPPF+ES ++ +
Sbjct: 199 QRIESQTEKL-LPLELHPNVH--------------IRYTVCNPPFYESKKQLESKEELKA 243
Query: 267 GGTPEEMVC--------SGGERAFITRIIEDSVALKQTFR----WYTSMVGRKSNLKFLI 314
G P +V GGE F+ RII++SV + + WYT+ +G +++ L
Sbjct: 244 RGKPNALVSDDSEMYYHKGGEVGFVMRIIDESVETSRIPQYQHCWYTAQIGIHDHVRELE 303
Query: 315 SKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPPARKIIS--------PHVAEKKNLSFML 366
S L++ + V T + T RW LAW+F +R +S P+ +++ S +
Sbjct: 304 SYLKEKSIPKVFQTA-IDFFTKRWVLAWNFDEDSRSPLSYIRPRQGWPNSYPRRDDS-LA 361
Query: 367 EGVQRQFSALDV 378
EG+ R+ + + V
Sbjct: 362 EGLDRELALVRV 373
>gi|45185014|ref|NP_982732.1| AAR189Cp [Ashbya gossypii ATCC 10895]
gi|44980635|gb|AAS50556.1| AAR189Cp [Ashbya gossypii ATCC 10895]
gi|374105932|gb|AEY94843.1| FAAR189Cp [Ashbya gossypii FDAG1]
Length = 394
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 138/332 (41%), Gaps = 76/332 (22%)
Query: 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWW---IPDGQL 84
D+ L S +P + Y DGR I + + L + +L GL + D L
Sbjct: 4 DYEQLVSQFPRLKQ---YWDDGRYHI--ANNESLVLLNQAILKQYFGLEILDKRVKDENL 58
Query: 85 CPTVPNRSNYIHWIEDLLSSNIIPTTSRNG-DKVKGFDIGTGANCIYPLLGASLLGWSF- 142
P VP R+ Y ++ +S + P +G D+GTGA IY +L +L +
Sbjct: 59 FPRVPGRALYCEYVA---TSLVWPLLWLSGATSYSCIDVGTGAYAIYAMLLVKMLPHTVQ 115
Query: 143 -VGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMS 201
+D++ +LE A V+ N S++ +RK G+ E NM
Sbjct: 116 VFATDISTSSLENAAAVVRDNGLESQIRLLRK---------------GR----EDNM--- 153
Query: 202 GHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE--AG 259
F++ G P+LV +CNPPF+ + +E A
Sbjct: 154 --------------FDVGLAG-----GAPLLV------------MCNPPFYATRDEIEAR 182
Query: 260 LNPKTSCG------GTPEEMVCSGGERAFITRIIEDS-VALKQTFRWYTSMVGRKSNLKF 312
+ KT GT EE+V GGE F R+I DS + +T W+T++V + +L
Sbjct: 183 RHSKTLTKALVPLRGTDEELVTEGGEVGFGKRMITDSSLRTSETPAWFTTLVAKYESLAP 242
Query: 313 LISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
L+++L + T E + G T RW L W+F
Sbjct: 243 LVAELIQSRATDYHVVELLCGDTRRWILCWNF 274
>gi|68074699|ref|XP_679266.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499973|emb|CAI04427.1| conserved hypothetical protein [Plasmodium berghei]
Length = 552
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 126/313 (40%), Gaps = 75/313 (23%)
Query: 84 LCPTVPNRSNYIHWIEDL--------LSSNIIPTTSRN------------GDKVKGFDIG 123
LCP +P R+NYIH I DL NI RN G +K D+G
Sbjct: 180 LCPCIPGRANYIHIISDLTIINSLENYKDNINKYIYRNNNDTNNTPILLYGHIIKVLDVG 239
Query: 124 TGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPS- 182
GANCIYPLLG + WSF+G D+ +L+++ N+ N ++++ + D + +
Sbjct: 240 VGANCIYPLLGNTAYKWSFIGVDINIDSLKYSYINIILNSKENDILLKYQHDKHKIFLNV 299
Query: 183 IQESLT--------GKSVQDESNM----DMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPP 230
I+ SL ++ +E N ++ ++DE S +++ +
Sbjct: 300 IKHSLYFFTMCNPPYYTLLEEFNKNPFRNVEANIDEVVYYSENNNEENCNDEIEN----- 354
Query: 231 VLVGVVRDGEQFDFCICNPPFFES---------MEEAGLN--------------PKTSCG 267
+ D ++D C N F+ + M+E N P S
Sbjct: 355 -----INDHNKYDIC-NNVNFYNTHGQISNNNKMKENEENYNYPKNGNNTPFIEPDNSNM 408
Query: 268 GTPEEMVCSGGERA----FITRIIEDSVALKQTFRWYTSMVGRKSNLKF----LISKLRK 319
+ + S + FI ++I +S W+T++V +KSN+K +I +R
Sbjct: 409 HVKTKDINSHSHKGGEYKFIMKMINESKIFFYNVIWFTTLVSKKSNVKLIKNEIIQLMRL 468
Query: 320 VGVTIVKTTEFVQ 332
V K +F+
Sbjct: 469 YSVHKKKQVDFLN 481
>gi|124808338|ref|XP_001348288.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23497179|gb|AAN36727.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 682
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 98/260 (37%), Gaps = 94/260 (36%)
Query: 58 FNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLL--------------- 102
F ++ ++L +D G + LCP VP R NYIH + DL
Sbjct: 203 FECNKKNENIILQNDQGGKF------LCPCVPGRVNYIHILADLTDMNELNNLKNNLNSI 256
Query: 103 --SSNIIPTTSRN-------------------GDKVKGFDIGTGANCIYPLLGASLLGWS 141
+ IP T+ N G+ +K DIG GANCIYPLLG ++ WS
Sbjct: 257 KNNDKYIPVTNINVNININNTNKVQNNMFLLYGNIIKVLDIGVGANCIYPLLGNNIYKWS 316
Query: 142 FVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMS 201
F+G+D+ +L+++ N+ ++N E+ ++ ++
Sbjct: 317 FLGTDINIDSLKYSFINI-------------LINNKENDIQLKYQTNKRN---------- 353
Query: 202 GHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLN 261
+ ++ + + F F +CNPP++ +EE N
Sbjct: 354 -----------------------------IFQNIINNSDLFFFSMCNPPYYTFIEEVNKN 384
Query: 262 PKTSCGGTPEEMVCSGGERA 281
P +E+V G++
Sbjct: 385 PYRMLEANVDEVVYYLGDQK 404
>gi|347838250|emb|CCD52822.1| similar to DUF890 domain protein [Botryotinia fuckeliana]
Length = 219
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ 332
MVC GGE +F++++I +S+ L+ +WYTSM+G+ S+L +I +L++ V TEF+Q
Sbjct: 1 MVCKGGEVSFVSQMIVESLQLRDGVQWYTSMLGKFSSLSKVIEQLKEYKVDNYAVTEFIQ 60
Query: 333 G-QTCRWGLAWSF 344
G +T RW +AWSF
Sbjct: 61 GTRTRRWAVAWSF 73
>gi|256072897|ref|XP_002572770.1| hypothetical protein [Schistosoma mansoni]
Length = 603
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN----------PKTSCGGTPEEMVCSGGER 280
V+ G ++ D + NPPFF +A + PKT E GGE
Sbjct: 153 VVFGGTQNTTYLDAVMANPPFFSDTSDAVGSTTCRSLKRPPPKTVSSAARHESQTVGGEV 212
Query: 281 AFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340
F R+I DS+ +T M+G+KS++ + L K +T + E QG+ RWG+
Sbjct: 213 YFCMRLIRDSIRYSTRVGVFTVMLGKKSSVSAVRRILHKFKITQISVYEMCQGRIMRWGV 272
Query: 341 AWSFVP 346
AW+F+P
Sbjct: 273 AWTFLP 278
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y + P+F LA+ + F+ GR +D+ + L++ LL++D GL
Sbjct: 7 MHQRNIYKQKKPNFKELAAKFDFFDAVAIKDECGRVVLDFRIPSHLSALSKALLMNDFGL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLL 102
+ P +L PTVP R NYI W+EDLL
Sbjct: 67 DVDFPGDRLIPTVPLRLNYILWLEDLL 93
>gi|256072895|ref|XP_002572769.1| hypothetical protein [Schistosoma mansoni]
Length = 433
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 231 VLVGVVRDGEQFDFCICNPPFFESMEEAGLN----------PKTSCGGTPEEMVCSGGER 280
V+ G ++ D + NPPFF +A + PKT E GGE
Sbjct: 153 VVFGGTQNTTYLDAVMANPPFFSDTSDAVGSTTCRSLKRPPPKTVSSAARHESQTVGGEV 212
Query: 281 AFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340
F R+I DS+ +T M+G+KS++ + L K +T + E QG+ RWG+
Sbjct: 213 YFCMRLIRDSIRYSTRVGVFTVMLGKKSSVSAVRRILHKFKITQISVYEMCQGRIMRWGV 272
Query: 341 AWSFVP 346
AW+F+P
Sbjct: 273 AWTFLP 278
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+H +N Y + P+F LA+ + F+ GR +D+ + L++ LL++D GL
Sbjct: 7 MHQRNIYKQKKPNFKELAAKFDFFDAVAIKDECGRVVLDFRIPSHLSALSKALLMNDFGL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLL 102
+ P +L PTVP R NYI W+EDLL
Sbjct: 67 DVDFPGDRLIPTVPLRLNYILWLEDLL 93
>gi|363754067|ref|XP_003647249.1| hypothetical protein Ecym_6027 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890886|gb|AET40432.1| hypothetical protein Ecym_6027 [Eremothecium cymbalariae
DBVPG#7215]
Length = 400
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 76/282 (26%)
Query: 79 IPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGF-DIGTGANCIYPLLGASL 137
I L P +P R Y E L+ + P G + F D+GTGA +Y +L + +
Sbjct: 54 ITKDNLFPRIPGRFKYC---ECLVDCFLTPLNWLYGYQQFCFIDVGTGAYAVYAVLLSKM 110
Query: 138 LG--WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195
LG +GSD+ + KSV++
Sbjct: 111 LGDAVKVIGSDIDE----------------------------------------KSVENA 130
Query: 196 SNM----DMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPF 251
SN+ ++ G++ + S+ F+L + PVL +CNPPF
Sbjct: 131 SNIIIKNNLQGNITLVLKDEGSNVFDLEFP-----NDRPVLT------------MCNPPF 173
Query: 252 FESMEEA--GLNPKTS------CGGTPEEMVCSGGERAFITRIIEDSVALKQTF-RWYTS 302
+ S +E K+S GT E++ +GGE FIT++I++S+ + + W+T+
Sbjct: 174 YSSRKEIEDARRIKSSGKTLLPIQGTDSELLTTGGELRFITQMIKNSMEVVSQYPIWFTT 233
Query: 303 MVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSF 344
+V + +L L+ +L VT EF+ G T +W L+W+F
Sbjct: 234 LVAKSRSLSKLVKQLEGSSVTDYYVHEFLIGTTTQWVLSWNF 275
>gi|289807537|ref|ZP_06538166.1| putative SAM-dependent methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
Length = 140
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 240 EQFDFCICNPPFFESMEEA-----------GLNPKTSC--GGTPEEMVCSGGERAFITRI 286
E +D +CNPPF +S A G N + GG +E+ C GGE AFI ++
Sbjct: 9 EFYDATLCNPPFHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKM 68
Query: 287 IEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345
I +S ++ W+T++V R NL L L + G V E QGQ +AW+F+
Sbjct: 69 IAESQTFRRQVLWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFM 127
>gi|422623670|ref|ZP_16691331.1| 23S rRNA mA1618 methyltransferase, partial [Pseudomonas syringae
pv. pisi str. 1704B]
gi|330947218|gb|EGH47948.1| 23S rRNA mA1618 methyltransferase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 114
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 262 PKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321
P + GG +E+ C GGE F+T++I++S L W++++V + SNL + S L+K G
Sbjct: 22 PVLNFGGQSQELWCDGGEIGFVTQLIQESALLPSQVAWFSTLVSKASNLPPIQSALKKAG 81
Query: 322 VTIVKTTEFVQGQTCRWGLAWSFVPPARKIISPH 355
V VK E QGQ +AW+F+ A++ +PH
Sbjct: 82 VLEVKVVEMGQGQKQSRFVAWTFLDKAQR--TPH 113
>gi|389585846|dbj|GAB68576.1| hypothetical protein PCYB_134500 [Plasmodium cynomolgi strain B]
Length = 534
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 60/239 (25%)
Query: 114 GDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT---------DVALEWAEKN------ 158
G ++K DIG G+NCIYPLLG + WSFVG D+ ++ L E N
Sbjct: 237 GSQIKVLDIGVGSNCIYPLLGNCIYNWSFVGVDVNLDSLKFCYLNILLNNKENNIVLNSL 296
Query: 159 --VKSNP------HISELI----------EIRKVDNSESTPSIQESLTGKSVQDESNMDM 200
V NP H++E++ E +KVD + S E T +S Q E+++D
Sbjct: 297 DEVNRNPFRNIRAHMNEVVYFDTEQVASTESQKVD--DQLGSTGEDKTTRSEQIEADLDK 354
Query: 201 SGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGL 260
P GA+ + VG + E+ F + GL
Sbjct: 355 ------------------PRGAKDDHLDTNYSVGASYNSEEEHFSGIKEEV-----DGGL 391
Query: 261 NPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319
P + V GGE FI +I++S + W+T+MV + N+K + ++ K
Sbjct: 392 QRSEIKSDIPSDRV--GGEYGFILNMIKESSSYFYNVVWFTTMVSKFKNVKLIKKEIIK 448
>gi|443527648|ref|ZP_21093702.1| hypothetical protein VCHC78A1_01777, partial [Vibrio cholerae
HC-78A1]
gi|443454016|gb|ELT17829.1| hypothetical protein VCHC78A1_01777, partial [Vibrio cholerae
HC-78A1]
Length = 152
Score = 68.9 bits (167), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 25/136 (18%)
Query: 234 GVVRDGEQFDFCICNPPFFESMEEAGL-------------------------NPKTSCGG 268
G++ E++ CNPPF S+ +A +P+ + GG
Sbjct: 3 GIIGANERYTVTTCNPPFHASLADAQQGTQRKLTNLQANQRKKGRLATPTLSHPRLNFGG 62
Query: 269 TPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328
E+ C GGE AFI ++ +S Q W+T+++ + N++ + +L K+G ++
Sbjct: 63 QKAELWCPGGEAAFIGKMAVESQQFAQQVLWFTTLISKGDNVRGMKKQLEKLGAQSIQVV 122
Query: 329 EFVQGQTCRWGLAWSF 344
E QGQ +AWSF
Sbjct: 123 EMAQGQKISRFVAWSF 138
>gi|443694418|gb|ELT95559.1| hypothetical protein CAPTEDRAFT_80336, partial [Capitella teleta]
Length = 119
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGL 75
+HP+N Y PDF LAS Y F+ G+ +D+ + LT LL D L
Sbjct: 7 MHPRNPYRIKKPDFKALASKYEEFKTHCTTDSKGQVHLDFKKPECLKALTVALLKDDFDL 66
Query: 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGA 135
+ +P +L PTVP R NYI W+ED+ P + DIGTGA+CIYPLL A
Sbjct: 67 DLDLPIDRLIPTVPLRLNYILWLEDVFGEG-TPV-------LNAIDIGTGASCIYPLLAA 118
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,964,192,765
Number of Sequences: 23463169
Number of extensions: 339747630
Number of successful extensions: 851020
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 846411
Number of HSP's gapped (non-prelim): 2138
length of query: 496
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 349
effective length of database: 8,910,109,524
effective search space: 3109628223876
effective search space used: 3109628223876
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)