Query 010971
Match_columns 496
No_of_seqs 386 out of 2654
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 18:06:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010971.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010971hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ixk_A Methyltransferase; open 100.0 2.9E-62 1E-66 497.7 30.2 309 65-383 7-315 (315)
2 3m4x_A NOL1/NOP2/SUN family pr 100.0 3.8E-60 1.3E-64 504.6 24.1 297 71-386 5-306 (456)
3 3m6w_A RRNA methylase; rRNA me 100.0 2.4E-59 8.2E-64 499.2 24.9 299 74-386 2-303 (464)
4 2frx_A Hypothetical protein YE 100.0 1.5E-58 5.3E-63 495.6 28.1 301 71-385 5-313 (479)
5 2yxl_A PH0851 protein, 450AA l 100.0 3.2E-57 1.1E-61 481.6 27.3 299 66-383 149-449 (450)
6 1sqg_A SUN protein, FMU protei 100.0 4.7E-56 1.6E-60 469.6 29.5 290 67-383 139-429 (429)
7 2b9e_A NOL1/NOP2/SUN domain fa 100.0 4.2E-56 1.4E-60 452.3 26.1 273 99-384 7-302 (309)
8 4fzv_A Putative methyltransfer 100.0 1E-55 3.5E-60 457.4 23.1 290 84-384 29-359 (359)
9 3ajd_A Putative methyltransfer 100.0 8.5E-50 2.9E-54 397.5 24.2 270 95-383 2-274 (274)
10 4dmg_A Putative uncharacterize 99.7 1.6E-18 5.5E-23 181.3 10.2 163 151-337 189-355 (393)
11 3id6_C Fibrillarin-like rRNA/T 99.7 1.5E-17 5.2E-22 162.3 13.5 133 175-338 73-213 (232)
12 3lpm_A Putative methyltransfer 99.7 9.7E-16 3.3E-20 149.9 19.3 166 157-337 20-197 (259)
13 1wxx_A TT1595, hypothetical pr 99.7 2.7E-17 9.3E-22 170.7 7.8 163 151-337 186-354 (382)
14 3v97_A Ribosomal RNA large sub 99.7 6.3E-17 2.2E-21 180.7 9.4 174 135-338 504-679 (703)
15 2as0_A Hypothetical protein PH 99.7 1.6E-16 5.4E-21 165.5 10.3 159 153-332 194-357 (396)
16 3c0k_A UPF0064 protein YCCW; P 99.6 7.5E-17 2.6E-21 168.1 5.2 167 149-337 194-368 (396)
17 2dul_A N(2),N(2)-dimethylguano 99.6 7.4E-17 2.5E-21 167.9 4.6 188 162-384 31-234 (378)
18 1i1n_A Protein-L-isoaspartate 99.6 1.8E-15 6.2E-20 144.0 13.4 167 112-320 6-190 (226)
19 3u81_A Catechol O-methyltransf 99.6 3.6E-15 1.2E-19 142.2 12.2 169 162-383 42-215 (221)
20 2b3t_A Protein methyltransfera 99.6 8.4E-15 2.9E-19 144.6 14.5 158 160-333 89-255 (276)
21 3tfw_A Putative O-methyltransf 99.6 1.5E-15 5.2E-20 148.1 9.1 121 167-316 52-174 (248)
22 3tma_A Methyltransferase; thum 99.6 7.3E-14 2.5E-18 143.0 18.8 139 171-336 196-334 (354)
23 2b78_A Hypothetical protein SM 99.6 1.9E-15 6.6E-20 157.3 7.0 166 151-337 187-358 (385)
24 3duw_A OMT, O-methyltransferas 99.6 3E-15 1E-19 142.2 7.2 121 167-316 47-171 (223)
25 3axs_A Probable N(2),N(2)-dime 99.5 9E-16 3.1E-20 160.4 2.5 196 156-384 24-228 (392)
26 2igt_A SAM dependent methyltra 99.5 2.9E-15 9.8E-20 153.2 5.8 157 152-329 126-288 (332)
27 2frn_A Hypothetical protein PH 99.5 2.5E-14 8.6E-19 142.1 12.4 127 176-337 123-253 (278)
28 2gpy_A O-methyltransferase; st 99.5 1.1E-14 3.6E-19 139.7 7.6 129 158-316 34-164 (233)
29 4df3_A Fibrillarin-like rRNA/T 99.5 1.4E-13 4.7E-18 134.4 13.5 116 167-312 60-182 (233)
30 1yb2_A Hypothetical protein TA 99.5 4.9E-14 1.7E-18 139.2 10.1 205 94-338 28-234 (275)
31 3bt7_A TRNA (uracil-5-)-methyl 99.5 8.8E-14 3E-18 143.7 12.3 102 179-315 214-329 (369)
32 3e05_A Precorrin-6Y C5,15-meth 99.5 3.6E-13 1.2E-17 126.2 15.4 140 158-333 21-160 (204)
33 3njr_A Precorrin-6Y methylase; 99.5 2.5E-13 8.4E-18 128.7 13.8 131 169-338 46-177 (204)
34 1nv8_A HEMK protein; class I a 99.5 1.3E-14 4.3E-19 145.1 4.9 222 77-325 22-259 (284)
35 3k6r_A Putative transferase PH 99.5 1.8E-13 6E-18 136.9 13.2 125 176-335 123-251 (278)
36 3mti_A RRNA methylase; SAM-dep 99.5 1.7E-13 5.8E-18 126.1 11.8 123 175-318 19-141 (185)
37 3evz_A Methyltransferase; NYSG 99.5 1.6E-13 5.5E-18 130.6 11.3 150 175-338 52-203 (230)
38 3c3y_A Pfomt, O-methyltransfer 99.5 1E-13 3.5E-18 134.4 9.3 121 167-316 59-185 (237)
39 3eey_A Putative rRNA methylase 99.5 3.9E-13 1.3E-17 124.9 12.8 126 175-318 19-145 (197)
40 2qm3_A Predicted methyltransfe 99.5 6.3E-13 2.2E-17 137.4 15.7 153 153-337 146-305 (373)
41 3r3h_A O-methyltransferase, SA 99.4 2.9E-14 9.8E-19 139.0 3.7 127 160-315 42-173 (242)
42 2ozv_A Hypothetical protein AT 99.4 1.3E-12 4.5E-17 128.3 15.6 137 167-312 25-170 (260)
43 4dzr_A Protein-(glutamine-N5) 99.4 4E-14 1.4E-18 131.9 3.1 144 177-329 29-178 (215)
44 1o54_A SAM-dependent O-methylt 99.4 4.8E-12 1.6E-16 124.7 16.5 133 169-338 103-236 (277)
45 3p9n_A Possible methyltransfer 99.4 1.7E-12 5.7E-17 120.4 12.4 113 177-316 43-157 (189)
46 3a27_A TYW2, uncharacterized p 99.4 5.8E-13 2E-17 131.9 9.6 109 173-316 114-222 (272)
47 3dr5_A Putative O-methyltransf 99.4 1.3E-12 4.5E-17 125.6 10.6 113 174-315 52-166 (221)
48 3dou_A Ribosomal RNA large sub 99.4 7E-13 2.4E-17 124.8 8.3 123 176-330 23-154 (191)
49 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.3E-11 4.3E-16 130.3 18.6 87 173-262 281-369 (433)
50 1nt2_A Fibrillarin-like PRE-rR 99.4 8.8E-12 3E-16 118.8 15.8 131 174-338 53-192 (210)
51 2yx1_A Hypothetical protein MJ 99.4 1.6E-12 5.4E-17 132.8 11.3 108 177-326 194-302 (336)
52 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.8E-12 9.5E-17 116.5 11.6 133 169-338 16-150 (178)
53 2pwy_A TRNA (adenine-N(1)-)-me 99.4 3.9E-12 1.3E-16 122.7 13.2 134 169-338 87-221 (258)
54 3mb5_A SAM-dependent methyltra 99.4 1.2E-12 4.3E-17 126.5 9.6 128 168-332 83-211 (255)
55 3gdh_A Trimethylguanosine synt 99.4 1.1E-12 3.7E-17 125.9 8.7 103 158-266 56-161 (241)
56 2ift_A Putative methylase HI07 99.4 1.7E-12 5.8E-17 122.4 9.7 112 178-316 53-167 (201)
57 3g89_A Ribosomal RNA small sub 99.3 6.9E-13 2.4E-17 129.9 6.7 130 176-337 78-208 (249)
58 1yzh_A TRNA (guanine-N(7)-)-me 99.3 6.3E-12 2.1E-16 118.9 12.9 140 177-338 40-179 (214)
59 1inl_A Spermidine synthase; be 99.3 8.5E-13 2.9E-17 132.6 7.0 131 178-331 90-226 (296)
60 3kkz_A Uncharacterized protein 99.3 1.2E-12 4.3E-17 127.6 7.6 122 176-328 44-166 (267)
61 3c3p_A Methyltransferase; NP_9 99.3 1.1E-12 3.7E-17 123.6 6.7 117 169-316 47-164 (210)
62 1xdz_A Methyltransferase GIDB; 99.3 1.2E-11 4E-16 119.4 14.0 131 175-337 67-198 (240)
63 1i9g_A Hypothetical protein RV 99.3 5.6E-12 1.9E-16 123.6 11.9 114 169-315 90-206 (280)
64 3tr6_A O-methyltransferase; ce 99.3 6.3E-13 2.2E-17 126.1 4.8 120 167-315 53-177 (225)
65 3dh0_A SAM dependent methyltra 99.3 1.8E-11 6.2E-16 115.1 14.8 141 170-338 29-178 (219)
66 2fca_A TRNA (guanine-N(7)-)-me 99.3 6.6E-12 2.2E-16 119.5 10.5 118 177-313 37-154 (213)
67 3tm4_A TRNA (guanine N2-)-meth 99.3 1.8E-11 6.1E-16 126.7 14.2 155 153-337 187-348 (373)
68 3grz_A L11 mtase, ribosomal pr 99.3 1.5E-11 5E-16 115.1 12.2 125 176-338 58-182 (205)
69 1wy7_A Hypothetical protein PH 99.3 2.7E-11 9.4E-16 113.2 13.9 126 175-337 46-171 (207)
70 3lbf_A Protein-L-isoaspartate 99.3 1.1E-11 3.8E-16 116.2 11.1 120 158-314 57-176 (210)
71 3f4k_A Putative methyltransfer 99.3 4E-11 1.4E-15 115.5 15.0 115 175-320 43-158 (257)
72 2fpo_A Methylase YHHF; structu 99.3 7E-12 2.4E-16 118.2 9.4 111 178-316 54-164 (202)
73 1sui_A Caffeoyl-COA O-methyltr 99.3 3.2E-12 1.1E-16 124.8 7.1 123 163-314 64-192 (247)
74 3ntv_A MW1564 protein; rossman 99.3 4.3E-12 1.5E-16 122.1 7.9 122 163-315 56-179 (232)
75 2pbf_A Protein-L-isoaspartate 99.3 1.5E-11 5E-16 116.9 11.1 104 175-312 77-193 (227)
76 1xxl_A YCGJ protein; structura 99.3 4.5E-11 1.5E-15 114.9 14.3 122 163-315 6-127 (239)
77 1dus_A MJ0882; hypothetical pr 99.3 3.1E-11 1.1E-15 110.2 12.6 118 167-315 41-160 (194)
78 3cbg_A O-methyltransferase; cy 99.3 5.8E-12 2E-16 121.3 7.7 119 169-316 63-186 (232)
79 3vc1_A Geranyl diphosphate 2-C 99.3 2.2E-11 7.5E-16 122.0 12.2 117 170-317 108-226 (312)
80 2plw_A Ribosomal RNA methyltra 99.3 3.8E-11 1.3E-15 111.6 12.9 126 176-330 20-169 (201)
81 1dl5_A Protein-L-isoaspartate 99.3 2.4E-11 8.3E-16 122.5 12.2 92 169-262 66-157 (317)
82 2h00_A Methyltransferase 10 do 99.2 9.3E-11 3.2E-15 113.5 15.5 148 178-336 65-233 (254)
83 1vl5_A Unknown conserved prote 99.2 8.7E-11 3E-15 113.8 14.9 132 152-314 11-142 (260)
84 3fpf_A Mtnas, putative unchara 99.2 3.2E-11 1.1E-15 121.5 12.2 106 173-312 117-222 (298)
85 2fhp_A Methylase, putative; al 99.2 2.5E-11 8.6E-16 111.0 10.1 115 176-317 42-159 (187)
86 2f8l_A Hypothetical protein LM 99.2 1E-11 3.5E-16 126.7 8.0 144 175-330 127-275 (344)
87 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.6E-11 5.4E-16 119.0 8.9 117 177-312 48-173 (246)
88 1l3i_A Precorrin-6Y methyltran 99.2 1.5E-11 5.2E-16 112.1 8.2 128 169-333 24-152 (192)
89 1r18_A Protein-L-isoaspartate( 99.2 2.4E-11 8.2E-16 115.9 9.8 110 171-314 75-196 (227)
90 1nkv_A Hypothetical protein YJ 99.2 9E-11 3.1E-15 113.0 13.7 115 171-316 29-144 (256)
91 3dxy_A TRNA (guanine-N(7)-)-me 99.2 8.9E-12 3.1E-16 119.6 6.6 118 177-313 33-151 (218)
92 2b25_A Hypothetical protein; s 99.2 6.8E-11 2.3E-15 119.9 13.4 113 169-312 96-219 (336)
93 4dcm_A Ribosomal RNA large sub 99.2 7.5E-11 2.6E-15 122.4 13.8 124 169-317 213-339 (375)
94 3kr9_A SAM-dependent methyltra 99.2 1.3E-10 4.5E-15 112.7 14.5 126 176-338 13-140 (225)
95 1o9g_A RRNA methyltransferase; 99.2 3.6E-11 1.2E-15 116.5 10.5 123 176-315 49-217 (250)
96 2ipx_A RRNA 2'-O-methyltransfe 99.2 6.7E-11 2.3E-15 113.2 12.0 109 174-312 73-182 (233)
97 2esr_A Methyltransferase; stru 99.2 3.6E-11 1.2E-15 109.7 9.5 111 176-316 29-142 (177)
98 1g8a_A Fibrillarin-like PRE-rR 99.2 9.7E-11 3.3E-15 111.4 12.7 108 176-313 71-179 (227)
99 2avd_A Catechol-O-methyltransf 99.2 5E-12 1.7E-16 120.1 3.5 115 172-315 63-182 (229)
100 1fbn_A MJ fibrillarin homologu 99.2 1.1E-10 3.7E-15 111.8 12.2 103 175-311 71-177 (230)
101 2yxe_A Protein-L-isoaspartate 99.2 1.3E-10 4.4E-15 109.3 12.1 112 169-314 68-179 (215)
102 2h1r_A Dimethyladenosine trans 99.2 1.5E-11 5E-16 123.7 5.7 130 159-316 23-163 (299)
103 3lec_A NADB-rossmann superfami 99.2 3.1E-10 1.1E-14 110.4 14.7 127 176-338 19-146 (230)
104 3dlc_A Putative S-adenosyl-L-m 99.2 4.8E-11 1.7E-15 111.2 8.7 113 172-315 38-151 (219)
105 3hem_A Cyclopropane-fatty-acyl 99.2 3E-10 1E-14 112.9 14.9 123 170-316 64-187 (302)
106 3jwh_A HEN1; methyltransferase 99.2 4E-10 1.4E-14 106.2 15.0 117 171-314 22-143 (217)
107 2nyu_A Putative ribosomal RNA 99.2 7.8E-11 2.7E-15 108.9 9.9 114 176-315 20-148 (196)
108 4gek_A TRNA (CMO5U34)-methyltr 99.2 1.2E-10 4.1E-15 114.9 11.3 113 176-316 68-182 (261)
109 2okc_A Type I restriction enzy 99.2 5.2E-11 1.8E-15 125.9 9.0 163 157-334 150-332 (445)
110 2yxd_A Probable cobalt-precorr 99.1 1.2E-10 4.1E-15 105.5 10.1 127 169-336 26-152 (183)
111 1ws6_A Methyltransferase; stru 99.1 3.3E-11 1.1E-15 108.4 6.2 108 178-317 41-152 (171)
112 3gnl_A Uncharacterized protein 99.1 3.8E-10 1.3E-14 110.7 14.1 128 175-338 18-146 (244)
113 1jg1_A PIMT;, protein-L-isoasp 99.1 1.3E-10 4.3E-15 111.6 10.4 121 157-314 70-191 (235)
114 3ofk_A Nodulation protein S; N 99.1 6.5E-10 2.2E-14 104.3 15.0 114 169-313 42-155 (216)
115 2yvl_A TRMI protein, hypotheti 99.1 3.4E-10 1.2E-14 108.4 13.2 109 171-315 84-193 (248)
116 3dmg_A Probable ribosomal RNA 99.1 2.1E-10 7.2E-15 119.3 12.5 114 177-317 232-345 (381)
117 1m6y_A S-adenosyl-methyltransf 99.1 4.6E-11 1.6E-15 120.6 7.2 90 170-261 18-110 (301)
118 1ej0_A FTSJ; methyltransferase 99.1 1.5E-10 5.2E-15 103.5 9.6 126 176-330 20-151 (180)
119 3dtn_A Putative methyltransfer 99.1 3.1E-10 1.1E-14 107.8 12.3 111 176-316 42-152 (234)
120 3cgg_A SAM-dependent methyltra 99.1 2E-09 6.7E-14 98.2 17.1 129 176-338 44-172 (195)
121 2bm8_A Cephalosporin hydroxyla 99.1 1.7E-11 5.8E-16 118.9 3.4 130 172-336 75-214 (236)
122 3bus_A REBM, methyltransferase 99.1 1.2E-09 4E-14 106.3 16.4 115 171-315 54-169 (273)
123 2hnk_A SAM-dependent O-methylt 99.1 3.1E-11 1.1E-15 116.1 5.1 119 169-316 51-185 (239)
124 3ujc_A Phosphoethanolamine N-m 99.1 1.7E-10 5.9E-15 111.1 10.3 114 172-315 49-162 (266)
125 1vbf_A 231AA long hypothetical 99.1 2.3E-10 7.9E-15 108.7 10.8 120 157-315 49-168 (231)
126 2jjq_A Uncharacterized RNA met 99.1 4.5E-10 1.5E-14 118.5 14.0 79 176-262 288-366 (425)
127 3orh_A Guanidinoacetate N-meth 99.1 6.7E-11 2.3E-15 114.4 6.5 113 176-312 58-170 (236)
128 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.4E-10 4.8E-15 112.5 8.8 120 176-314 44-170 (235)
129 3mgg_A Methyltransferase; NYSG 99.1 4.7E-10 1.6E-14 109.5 12.2 109 175-312 34-142 (276)
130 3jwg_A HEN1, methyltransferase 99.1 3.9E-10 1.3E-14 106.3 10.9 116 172-314 23-143 (219)
131 2xvm_A Tellurite resistance pr 99.1 8.6E-10 2.9E-14 101.5 12.9 114 169-312 23-136 (199)
132 2o57_A Putative sarcosine dime 99.1 1.5E-09 5E-14 107.2 15.4 111 175-315 79-190 (297)
133 1zq9_A Probable dimethyladenos 99.1 9.3E-11 3.2E-15 117.0 6.7 95 160-261 10-105 (285)
134 2ih2_A Modification methylase 99.1 2E-11 6.9E-16 126.7 1.9 161 158-337 19-191 (421)
135 3ocj_A Putative exported prote 99.1 6.9E-10 2.4E-14 110.7 12.9 114 175-314 115-229 (305)
136 1kpg_A CFA synthase;, cyclopro 99.1 1.1E-09 3.9E-14 107.5 13.8 113 172-315 58-171 (287)
137 1jsx_A Glucose-inhibited divis 99.1 3.1E-10 1.1E-14 105.8 9.3 103 178-314 65-167 (207)
138 2nxc_A L11 mtase, ribosomal pr 99.1 4.5E-10 1.5E-14 109.8 10.4 124 176-338 118-241 (254)
139 3sm3_A SAM-dependent methyltra 99.1 2.5E-09 8.6E-14 100.8 15.3 113 176-316 28-145 (235)
140 2fk8_A Methoxy mycolic acid sy 99.1 1.1E-09 3.6E-14 109.5 13.1 116 171-317 83-199 (318)
141 1pjz_A Thiopurine S-methyltran 99.1 3.2E-10 1.1E-14 106.9 8.7 115 174-316 18-144 (203)
142 2ar0_A M.ecoki, type I restric 99.0 4.7E-10 1.6E-14 121.8 10.2 163 157-332 148-335 (541)
143 2p41_A Type II methyltransfera 99.0 2.1E-10 7.1E-15 115.9 6.9 106 176-311 80-190 (305)
144 1zx0_A Guanidinoacetate N-meth 99.0 1.8E-10 6.1E-15 110.5 6.0 115 176-314 58-172 (236)
145 2kw5_A SLR1183 protein; struct 99.0 2.3E-09 8E-14 99.5 13.4 108 176-316 28-135 (202)
146 3uwp_A Histone-lysine N-methyl 99.0 8.9E-10 3E-14 115.6 11.4 117 171-315 166-291 (438)
147 4fsd_A Arsenic methyltransfera 99.0 1.9E-09 6.4E-14 111.6 13.6 113 176-314 81-205 (383)
148 3gu3_A Methyltransferase; alph 99.0 5.4E-10 1.8E-14 110.3 9.0 117 168-314 12-128 (284)
149 2pjd_A Ribosomal RNA small sub 99.0 1.2E-09 4.3E-14 111.3 12.0 124 167-317 185-308 (343)
150 1xtp_A LMAJ004091AAA; SGPP, st 99.0 1.3E-09 4.5E-14 104.5 11.5 136 173-338 88-235 (254)
151 3ou2_A SAM-dependent methyltra 99.0 3.1E-09 1.1E-13 99.1 13.8 107 175-315 43-149 (218)
152 3mq2_A 16S rRNA methyltransfer 99.0 9.1E-10 3.1E-14 103.8 10.0 143 171-338 20-181 (218)
153 1ve3_A Hypothetical protein PH 99.0 2.5E-09 8.5E-14 100.6 13.0 108 177-314 37-144 (227)
154 3e23_A Uncharacterized protein 99.0 2.7E-09 9.1E-14 99.9 13.0 128 175-338 40-179 (211)
155 3g5t_A Trans-aconitate 3-methy 99.0 1.3E-09 4.3E-14 108.2 11.4 112 176-314 34-151 (299)
156 3ldu_A Putative methylase; str 99.0 6E-09 2.1E-13 108.4 16.4 107 150-259 161-311 (385)
157 1mjf_A Spermidine synthase; sp 99.0 4.3E-10 1.5E-14 111.9 7.4 113 177-316 74-197 (281)
158 4htf_A S-adenosylmethionine-de 99.0 4.3E-09 1.5E-13 103.4 14.4 131 178-338 68-229 (285)
159 3hnr_A Probable methyltransfer 99.0 1.4E-09 4.7E-14 102.2 10.2 109 174-316 41-149 (220)
160 2pxx_A Uncharacterized protein 99.0 1.6E-09 5.6E-14 100.7 10.4 123 176-315 40-162 (215)
161 2ex4_A Adrenal gland protein A 99.0 1.6E-09 5.4E-14 103.9 10.6 134 177-338 78-222 (241)
162 3m70_A Tellurite resistance pr 99.0 2.2E-09 7.6E-14 105.5 11.8 110 172-312 114-223 (286)
163 1ri5_A MRNA capping enzyme; me 99.0 3.1E-09 1.1E-13 104.1 12.7 113 176-314 62-176 (298)
164 3bkx_A SAM-dependent methyltra 99.0 1.5E-09 5.1E-14 105.6 10.0 121 169-317 34-164 (275)
165 3p2e_A 16S rRNA methylase; met 99.0 8E-10 2.7E-14 106.4 7.7 114 176-312 22-139 (225)
166 3g2m_A PCZA361.24; SAM-depende 99.0 2E-09 6.7E-14 106.8 10.6 113 174-316 79-194 (299)
167 2xyq_A Putative 2'-O-methyl tr 99.0 1.1E-09 3.8E-14 110.0 8.7 125 174-334 59-190 (290)
168 3g07_A 7SK snRNA methylphospha 99.0 1.4E-09 4.8E-14 108.2 9.4 117 178-315 46-223 (292)
169 3k0b_A Predicted N6-adenine-sp 98.9 7.5E-09 2.6E-13 108.1 15.1 106 151-259 168-317 (393)
170 3h2b_A SAM-dependent methyltra 98.9 4.6E-09 1.6E-13 97.5 11.6 126 179-338 42-179 (203)
171 3ldg_A Putative uncharacterize 98.9 8.1E-09 2.8E-13 107.5 14.5 107 150-259 160-310 (384)
172 2p8j_A S-adenosylmethionine-de 98.9 3.3E-09 1.1E-13 98.7 10.2 112 176-316 21-132 (209)
173 3q87_B N6 adenine specific DNA 98.9 2.3E-09 8E-14 98.1 8.9 133 169-338 12-146 (170)
174 3g5l_A Putative S-adenosylmeth 98.9 9.1E-09 3.1E-13 99.0 13.4 110 172-314 38-147 (253)
175 3l8d_A Methyltransferase; stru 98.9 7.1E-09 2.4E-13 98.6 12.3 129 176-338 51-197 (242)
176 2p35_A Trans-aconitate 2-methy 98.9 5.4E-09 1.9E-13 100.4 11.4 110 171-315 26-135 (259)
177 2fyt_A Protein arginine N-meth 98.9 3.7E-09 1.3E-13 107.9 10.6 113 174-315 60-174 (340)
178 3lkd_A Type I restriction-modi 98.9 2.3E-09 7.7E-14 116.4 9.4 158 167-334 206-383 (542)
179 1u2z_A Histone-lysine N-methyl 98.9 6.8E-09 2.3E-13 109.7 12.7 112 172-311 236-358 (433)
180 3i9f_A Putative type 11 methyl 98.9 1.6E-08 5.5E-13 91.2 13.5 106 172-316 11-116 (170)
181 3lcc_A Putative methyl chlorid 98.9 6.6E-09 2.2E-13 99.0 11.5 131 178-338 66-204 (235)
182 3m33_A Uncharacterized protein 98.9 2E-09 6.9E-14 102.6 7.9 117 176-338 46-164 (226)
183 3bzb_A Uncharacterized protein 98.9 8E-09 2.7E-13 102.4 12.3 132 177-338 78-234 (281)
184 3ll7_A Putative methyltransfer 98.9 1.2E-09 4.2E-14 114.6 6.7 82 178-262 93-176 (410)
185 2r6z_A UPF0341 protein in RSP 98.9 4.2E-09 1.4E-13 103.9 9.9 91 167-260 72-172 (258)
186 3ccf_A Cyclopropane-fatty-acyl 98.9 1.6E-08 5.5E-13 99.1 13.7 110 169-315 48-157 (279)
187 2a14_A Indolethylamine N-methy 98.9 7.5E-09 2.6E-13 101.2 11.0 140 175-338 52-235 (263)
188 3q7e_A Protein arginine N-meth 98.9 4.7E-09 1.6E-13 107.5 9.5 113 176-316 64-177 (349)
189 1ne2_A Hypothetical protein TA 98.9 7.4E-09 2.5E-13 96.4 10.0 115 175-332 48-162 (200)
190 3d2l_A SAM-dependent methyltra 98.9 9.3E-09 3.2E-13 97.7 10.8 108 177-314 32-139 (243)
191 3adn_A Spermidine synthase; am 98.9 6.1E-09 2.1E-13 104.6 10.0 137 154-315 53-201 (294)
192 1wzn_A SAM-dependent methyltra 98.9 2E-08 6.9E-13 96.3 13.2 109 175-313 38-146 (252)
193 2vdw_A Vaccinia virus capping 98.8 9.2E-09 3.1E-13 103.5 10.7 113 177-314 47-171 (302)
194 2yqz_A Hypothetical protein TT 98.8 1.3E-08 4.5E-13 97.8 11.0 105 175-311 36-140 (263)
195 2i62_A Nicotinamide N-methyltr 98.8 1.1E-08 3.9E-13 98.3 10.4 140 175-338 53-236 (265)
196 1g6q_1 HnRNP arginine N-methyl 98.8 3.9E-09 1.3E-13 107.1 7.4 113 175-315 35-148 (328)
197 2p7i_A Hypothetical protein; p 98.8 1.5E-08 5.1E-13 96.0 10.9 126 177-338 41-196 (250)
198 3bwc_A Spermidine synthase; SA 98.8 5.8E-09 2E-13 104.9 8.3 115 177-314 94-212 (304)
199 3bkw_A MLL3908 protein, S-aden 98.8 6.7E-09 2.3E-13 98.7 7.8 111 170-313 35-145 (243)
200 3v97_A Ribosomal RNA large sub 98.8 4.1E-08 1.4E-12 109.7 15.1 110 150-259 156-313 (703)
201 3pfg_A N-methyltransferase; N, 98.8 3.7E-08 1.3E-12 95.4 12.9 104 177-313 49-152 (263)
202 2r3s_A Uncharacterized protein 98.8 9.1E-08 3.1E-12 95.9 16.2 116 173-317 158-276 (335)
203 1qzz_A RDMB, aclacinomycin-10- 98.8 1.2E-07 4E-12 96.8 17.2 113 171-313 175-288 (374)
204 1xj5_A Spermidine synthase 1; 98.8 3.9E-09 1.3E-13 107.9 5.9 118 176-316 118-239 (334)
205 3r0q_C Probable protein argini 98.8 6.6E-09 2.2E-13 107.5 7.7 113 174-315 59-172 (376)
206 2oxt_A Nucleoside-2'-O-methylt 98.8 6.3E-09 2.1E-13 103.0 7.0 106 176-314 72-187 (265)
207 3iv6_A Putative Zn-dependent a 98.8 1.7E-08 5.7E-13 99.9 10.1 126 170-326 37-162 (261)
208 2y1w_A Histone-arginine methyl 98.8 8E-09 2.7E-13 105.6 7.9 114 173-316 45-159 (348)
209 3dli_A Methyltransferase; PSI- 98.8 2.6E-08 9E-13 95.2 11.0 104 176-314 39-142 (240)
210 3fzg_A 16S rRNA methylase; met 98.8 5.2E-09 1.8E-13 99.2 5.8 108 177-316 48-157 (200)
211 2wa2_A Non-structural protein 98.8 5.1E-09 1.8E-13 104.3 5.8 106 176-314 80-195 (276)
212 1y8c_A S-adenosylmethionine-de 98.8 2.4E-08 8.3E-13 94.6 10.1 107 178-313 37-143 (246)
213 3e8s_A Putative SAM dependent 98.8 2.8E-08 9.4E-13 92.9 10.1 104 174-314 48-154 (227)
214 2gb4_A Thiopurine S-methyltran 98.7 3.9E-08 1.3E-12 96.4 11.4 112 175-314 65-193 (252)
215 2i7c_A Spermidine synthase; tr 98.7 1.6E-08 5.5E-13 100.6 8.8 116 177-316 77-196 (283)
216 3thr_A Glycine N-methyltransfe 98.7 1.8E-08 6.1E-13 99.0 9.0 123 171-314 50-177 (293)
217 3bgv_A MRNA CAP guanine-N7 met 98.7 3.8E-08 1.3E-12 98.3 11.4 114 177-315 33-158 (313)
218 3b3j_A Histone-arginine methyl 98.7 1.9E-08 6.4E-13 107.7 9.4 112 174-315 154-266 (480)
219 3ege_A Putative methyltransfer 98.7 2E-08 6.7E-13 97.7 8.9 106 171-314 27-132 (261)
220 2qfm_A Spermine synthase; sper 98.7 1.6E-08 5.3E-13 104.5 8.1 123 178-318 188-320 (364)
221 2b2c_A Spermidine synthase; be 98.7 1.4E-08 5E-13 102.8 7.6 116 177-316 107-226 (314)
222 3ggd_A SAM-dependent methyltra 98.7 4.7E-08 1.6E-12 93.5 10.7 111 175-315 53-166 (245)
223 1iy9_A Spermidine synthase; ro 98.7 4.5E-08 1.5E-12 97.1 10.7 113 178-314 75-191 (275)
224 2o07_A Spermidine synthase; st 98.7 1.7E-08 5.7E-13 101.8 7.7 115 177-315 94-212 (304)
225 3khk_A Type I restriction-modi 98.7 4E-09 1.4E-13 114.6 3.3 166 157-333 224-420 (544)
226 3dp7_A SAM-dependent methyltra 98.7 4E-07 1.4E-11 93.2 18.0 115 177-318 178-293 (363)
227 3htx_A HEN1; HEN1, small RNA m 98.7 4.6E-08 1.6E-12 109.8 11.6 117 172-315 715-837 (950)
228 3i53_A O-methyltransferase; CO 98.7 4.7E-07 1.6E-11 91.2 18.0 113 175-317 166-279 (332)
229 2pt6_A Spermidine synthase; tr 98.7 1.6E-08 5.6E-13 102.6 7.0 115 177-315 115-233 (321)
230 1tw3_A COMT, carminomycin 4-O- 98.7 2.6E-07 9.1E-12 93.8 15.9 114 171-314 176-290 (360)
231 2avn_A Ubiquinone/menaquinone 98.7 4.1E-08 1.4E-12 95.3 9.5 102 178-315 54-155 (260)
232 1x19_A CRTF-related protein; m 98.7 2.9E-07 1E-11 93.7 16.1 116 171-316 183-299 (359)
233 3gjy_A Spermidine synthase; AP 98.7 4E-08 1.4E-12 99.8 9.3 113 180-315 91-203 (317)
234 3bxo_A N,N-dimethyltransferase 98.7 1.1E-07 3.7E-12 90.0 11.7 106 177-315 39-144 (239)
235 2gs9_A Hypothetical protein TT 98.7 5.3E-08 1.8E-12 90.9 9.2 100 178-315 36-135 (211)
236 3gru_A Dimethyladenosine trans 98.7 5E-08 1.7E-12 98.1 9.4 93 160-259 32-124 (295)
237 2oyr_A UPF0341 protein YHIQ; a 98.7 2.9E-08 1E-12 98.0 7.4 90 167-260 75-175 (258)
238 1yub_A Ermam, rRNA methyltrans 98.7 4.9E-10 1.7E-14 108.8 -5.4 96 160-262 11-106 (245)
239 3gwz_A MMCR; methyltransferase 98.6 8.8E-07 3E-11 90.9 18.5 117 172-318 196-313 (369)
240 1p91_A Ribosomal RNA large sub 98.6 3.6E-08 1.2E-12 95.8 7.6 98 177-315 84-181 (269)
241 3mcz_A O-methyltransferase; ad 98.6 4.4E-07 1.5E-11 91.8 15.9 117 174-317 174-292 (352)
242 2g72_A Phenylethanolamine N-me 98.6 1.7E-07 5.9E-12 92.3 12.3 138 177-338 70-253 (289)
243 4hg2_A Methyltransferase type 98.6 4.4E-08 1.5E-12 96.3 7.8 103 178-318 39-141 (257)
244 3cc8_A Putative methyltransfer 98.6 1.7E-07 5.8E-12 87.6 11.2 102 177-314 31-132 (230)
245 2aot_A HMT, histamine N-methyl 98.6 8E-08 2.7E-12 95.1 9.3 113 176-314 50-174 (292)
246 1uir_A Polyamine aminopropyltr 98.6 3.9E-08 1.3E-12 99.3 7.1 118 177-315 76-198 (314)
247 1vlm_A SAM-dependent methyltra 98.6 1.4E-07 4.7E-12 89.1 9.7 118 179-338 48-185 (219)
248 4hc4_A Protein arginine N-meth 98.6 6.7E-08 2.3E-12 100.4 8.2 117 177-322 82-201 (376)
249 2zfu_A Nucleomethylin, cerebra 98.6 2.4E-07 8.4E-12 86.7 11.2 112 175-337 64-175 (215)
250 2ip2_A Probable phenazine-spec 98.6 6.6E-07 2.3E-11 89.9 14.8 112 174-316 164-276 (334)
251 3ufb_A Type I restriction-modi 98.6 1.5E-07 5.2E-12 101.8 10.2 168 157-334 196-387 (530)
252 3s1s_A Restriction endonucleas 98.6 1.8E-07 6.2E-12 104.8 10.9 148 177-333 320-490 (878)
253 2cmg_A Spermidine synthase; tr 98.5 1.2E-07 4.1E-12 93.5 6.7 100 178-316 72-175 (262)
254 3cvo_A Methyltransferase-like 98.5 8.6E-07 2.9E-11 84.5 12.3 116 177-329 29-169 (202)
255 2qe6_A Uncharacterized protein 98.5 1.1E-06 3.8E-11 86.8 13.3 111 178-315 77-199 (274)
256 3tqs_A Ribosomal RNA small sub 98.5 1.9E-07 6.4E-12 91.9 7.4 87 167-259 18-106 (255)
257 2px2_A Genome polyprotein [con 98.4 1.3E-07 4.3E-12 93.0 5.2 77 176-264 71-153 (269)
258 1qam_A ERMC' methyltransferase 98.4 3.4E-07 1.2E-11 89.0 7.3 93 160-259 12-104 (244)
259 1wg8_A Predicted S-adenosylmet 98.4 2.1E-07 7E-12 92.9 5.6 84 171-261 15-101 (285)
260 3sso_A Methyltransferase; macr 98.4 3E-07 1E-11 96.1 7.1 101 178-314 216-326 (419)
261 3giw_A Protein of unknown func 98.4 4.1E-07 1.4E-11 90.7 6.8 114 179-315 79-203 (277)
262 3lst_A CALO1 methyltransferase 98.4 2.6E-06 9E-11 86.5 12.9 112 172-316 178-290 (348)
263 2qy6_A UPF0209 protein YFCK; s 98.3 1.6E-06 5.5E-11 85.4 10.2 131 176-338 58-232 (257)
264 1af7_A Chemotaxis receptor met 98.3 1.8E-06 6.1E-11 85.9 10.2 108 178-310 105-250 (274)
265 3hp7_A Hemolysin, putative; st 98.3 8.9E-07 3E-11 88.9 8.1 98 178-311 85-184 (291)
266 3uzu_A Ribosomal RNA small sub 98.3 9.4E-07 3.2E-11 88.1 8.2 95 160-258 24-123 (279)
267 3tka_A Ribosomal RNA small sub 98.3 5.2E-07 1.8E-11 92.0 6.4 87 171-261 50-140 (347)
268 3ftd_A Dimethyladenosine trans 98.3 7.4E-07 2.5E-11 87.2 6.6 94 160-260 13-106 (249)
269 3fut_A Dimethyladenosine trans 98.3 6.7E-07 2.3E-11 88.8 6.3 94 160-261 29-122 (271)
270 3frh_A 16S rRNA methylase; met 98.2 3.6E-06 1.2E-10 82.4 10.2 107 177-316 104-211 (253)
271 4a6d_A Hydroxyindole O-methylt 98.2 1.1E-05 3.7E-10 82.5 14.3 116 173-318 174-289 (353)
272 4e2x_A TCAB9; kijanose, tetron 98.2 1E-06 3.5E-11 91.4 6.8 107 173-314 102-210 (416)
273 3opn_A Putative hemolysin; str 98.2 2.3E-06 7.7E-11 82.8 8.5 100 178-312 37-137 (232)
274 3evf_A RNA-directed RNA polyme 98.2 1.1E-06 3.8E-11 87.2 6.3 127 176-327 72-199 (277)
275 3lcv_B Sisomicin-gentamicin re 98.2 2.2E-06 7.5E-11 84.8 7.6 109 178-316 132-241 (281)
276 3eld_A Methyltransferase; flav 98.1 2.7E-06 9.2E-11 85.1 6.4 128 177-330 80-209 (300)
277 3r24_A NSP16, 2'-O-methyl tran 98.1 4.5E-06 1.5E-10 83.4 7.8 106 174-311 105-216 (344)
278 3gcz_A Polyprotein; flavivirus 98.1 1.1E-06 3.8E-11 87.4 3.1 112 176-312 88-201 (282)
279 1qyr_A KSGA, high level kasuga 98.1 1.7E-06 5.7E-11 84.9 4.0 87 169-260 12-101 (252)
280 4azs_A Methyltransferase WBDD; 98.0 5.7E-06 1.9E-10 90.0 7.7 75 178-255 66-140 (569)
281 3reo_A (ISO)eugenol O-methyltr 98.0 2.4E-05 8.1E-10 80.3 11.4 105 176-317 201-305 (368)
282 1fp2_A Isoflavone O-methyltran 98.0 4E-05 1.4E-09 77.7 13.0 104 176-316 186-292 (352)
283 2wk1_A NOVP; transferase, O-me 98.0 8.9E-06 3E-10 81.3 7.8 125 179-333 107-264 (282)
284 4auk_A Ribosomal RNA large sub 98.0 3.1E-06 1.1E-10 87.5 4.5 73 176-260 209-281 (375)
285 3p9c_A Caffeic acid O-methyltr 98.0 3.1E-05 1.1E-09 79.3 11.9 105 176-317 199-303 (364)
286 1fp1_D Isoliquiritigenin 2'-O- 97.9 3.5E-05 1.2E-09 78.8 9.9 103 176-315 207-309 (372)
287 3p8z_A Mtase, non-structural p 97.9 4.5E-05 1.5E-09 74.1 9.9 80 176-261 76-157 (267)
288 1zg3_A Isoflavanone 4'-O-methy 97.9 7.7E-05 2.6E-09 75.8 12.0 103 177-316 192-297 (358)
289 2oo3_A Protein involved in cat 97.8 2.3E-05 7.8E-10 78.2 6.5 159 138-330 46-212 (283)
290 3g7u_A Cytosine-specific methy 97.8 0.00025 8.6E-09 73.4 13.9 81 180-267 3-89 (376)
291 2ld4_A Anamorsin; methyltransf 97.7 3E-05 1E-09 70.2 4.8 114 174-333 8-128 (176)
292 1g55_A DNA cytosine methyltran 97.6 3.3E-05 1.1E-09 79.0 4.8 84 179-267 2-86 (343)
293 2c7p_A Modification methylase 97.5 0.00017 5.7E-09 73.4 8.6 81 178-268 10-90 (327)
294 3o4f_A Spermidine synthase; am 97.4 0.002 7E-08 64.5 13.9 117 171-312 77-198 (294)
295 3ua3_A Protein arginine N-meth 97.3 0.00019 6.4E-09 79.6 6.0 122 179-325 410-549 (745)
296 3lkz_A Non-structural protein 97.2 0.00067 2.3E-08 67.9 8.3 77 176-258 92-169 (321)
297 3c6k_A Spermine synthase; sper 97.2 0.0008 2.7E-08 69.7 8.3 121 178-316 205-336 (381)
298 4gqb_A Protein arginine N-meth 97.1 0.00054 1.9E-08 75.5 7.3 120 179-326 358-483 (637)
299 3qv2_A 5-cytosine DNA methyltr 96.9 0.001 3.4E-08 67.7 5.7 78 179-262 10-89 (327)
300 4h0n_A DNMT2; SAH binding, tra 96.8 0.00097 3.3E-08 67.9 5.0 82 180-266 4-86 (333)
301 2qrv_A DNA (cytosine-5)-methyl 96.8 0.0016 5.6E-08 65.2 6.5 84 177-266 14-100 (295)
302 3vyw_A MNMC2; tRNA wobble urid 96.7 0.0064 2.2E-07 61.3 9.9 131 178-338 96-245 (308)
303 3ubt_Y Modification methylase 96.6 0.0062 2.1E-07 60.9 9.7 79 180-267 1-79 (331)
304 2zig_A TTHA0409, putative modi 96.6 0.0046 1.6E-07 61.4 8.1 49 177-228 234-282 (297)
305 2py6_A Methyltransferase FKBM; 96.6 0.0053 1.8E-07 64.0 8.8 63 174-236 222-289 (409)
306 3b5i_A S-adenosyl-L-methionine 96.4 0.018 6.2E-07 59.5 11.6 131 179-315 53-228 (374)
307 3me5_A Cytosine-specific methy 96.1 0.0045 1.5E-07 66.1 5.4 85 178-266 87-186 (482)
308 2k4m_A TR8_protein, UPF0146 pr 96.1 0.0095 3.2E-07 53.9 6.6 64 177-258 34-99 (153)
309 1i4w_A Mitochondrial replicati 96.0 0.011 3.8E-07 60.6 7.3 82 157-242 30-118 (353)
310 1g60_A Adenine-specific methyl 95.8 0.011 3.8E-07 57.4 6.4 50 176-228 210-259 (260)
311 1pl8_A Human sorbitol dehydrog 95.7 0.026 9E-07 57.0 8.7 99 174-312 167-273 (356)
312 2efj_A 3,7-dimethylxanthine me 95.6 0.089 3E-06 54.5 12.4 77 179-255 53-155 (384)
313 3s2e_A Zinc-containing alcohol 95.6 0.039 1.3E-06 55.2 9.4 97 175-311 163-262 (340)
314 3two_A Mannitol dehydrogenase; 95.6 0.028 9.6E-07 56.5 8.3 91 175-311 173-264 (348)
315 4ej6_A Putative zinc-binding d 95.5 0.037 1.3E-06 56.3 9.1 99 174-311 178-283 (370)
316 1e3j_A NADP(H)-dependent ketos 95.3 0.14 4.9E-06 51.4 12.5 98 174-311 164-270 (352)
317 1kol_A Formaldehyde dehydrogen 95.3 0.02 7E-07 58.6 6.2 111 175-311 182-299 (398)
318 2dph_A Formaldehyde dismutase; 95.2 0.016 5.6E-07 59.5 5.4 112 174-311 181-298 (398)
319 3pvc_A TRNA 5-methylaminomethy 95.2 0.012 4E-07 65.1 4.3 131 177-337 57-229 (689)
320 3jv7_A ADH-A; dehydrogenase, n 95.0 0.035 1.2E-06 55.7 6.8 97 175-311 168-269 (345)
321 3fpc_A NADP-dependent alcohol 94.9 0.057 1.9E-06 54.3 8.3 99 174-311 162-265 (352)
322 1uuf_A YAHK, zinc-type alcohol 94.9 0.054 1.8E-06 55.2 8.0 96 175-311 191-287 (369)
323 3uko_A Alcohol dehydrogenase c 94.9 0.044 1.5E-06 55.8 7.4 99 174-311 189-294 (378)
324 1p0f_A NADP-dependent alcohol 94.9 0.057 1.9E-06 54.8 8.1 99 174-311 187-292 (373)
325 1f8f_A Benzyl alcohol dehydrog 94.8 0.038 1.3E-06 56.0 6.7 99 174-311 186-288 (371)
326 3uog_A Alcohol dehydrogenase; 94.7 0.1 3.5E-06 52.8 9.6 98 174-312 185-287 (363)
327 2zig_A TTHA0409, putative modi 94.7 0.023 8E-07 56.2 4.6 103 229-337 20-132 (297)
328 2jhf_A Alcohol dehydrogenase E 94.6 0.073 2.5E-06 54.0 8.2 99 174-311 187-292 (374)
329 4dvj_A Putative zinc-dependent 94.6 0.054 1.9E-06 55.0 7.2 94 178-311 171-269 (363)
330 1e3i_A Alcohol dehydrogenase, 94.6 0.061 2.1E-06 54.6 7.6 100 174-312 191-297 (376)
331 2fzw_A Alcohol dehydrogenase c 94.6 0.07 2.4E-06 54.0 8.0 99 174-311 186-291 (373)
332 4a2c_A Galactitol-1-phosphate 94.5 0.24 8.1E-06 49.3 11.5 99 174-311 156-259 (346)
333 4ft4_B DNA (cytosine-5)-methyl 94.5 0.059 2E-06 60.4 7.7 46 178-223 211-260 (784)
334 4dkj_A Cytosine-specific methy 94.5 0.034 1.2E-06 58.0 5.4 46 180-225 11-60 (403)
335 1cdo_A Alcohol dehydrogenase; 94.4 0.074 2.5E-06 53.9 7.6 99 174-311 188-293 (374)
336 3m6i_A L-arabinitol 4-dehydrog 94.4 0.21 7.1E-06 50.3 11.0 101 174-312 175-283 (363)
337 3swr_A DNA (cytosine-5)-methyl 94.4 0.11 3.7E-06 60.1 9.6 83 179-267 540-636 (1002)
338 4fs3_A Enoyl-[acyl-carrier-pro 94.0 0.26 8.9E-06 47.3 10.3 84 178-261 5-98 (256)
339 1piw_A Hypothetical zinc-type 93.8 0.065 2.2E-06 54.1 5.8 73 174-255 175-249 (360)
340 3oig_A Enoyl-[acyl-carrier-pro 93.8 0.63 2.2E-05 44.3 12.5 130 178-314 6-149 (266)
341 1boo_A Protein (N-4 cytosine-s 93.8 0.11 3.8E-06 52.1 7.3 96 230-337 14-116 (323)
342 3tos_A CALS11; methyltransfera 93.7 0.086 2.9E-06 51.7 6.1 129 180-337 71-243 (257)
343 3ip1_A Alcohol dehydrogenase, 93.6 0.46 1.6E-05 48.7 11.9 74 175-255 210-288 (404)
344 1vj0_A Alcohol dehydrogenase, 93.6 0.13 4.5E-06 52.4 7.6 99 174-311 190-297 (380)
345 1pqw_A Polyketide synthase; ro 93.3 0.13 4.4E-06 47.0 6.4 98 174-311 34-136 (198)
346 1m6e_X S-adenosyl-L-methionnin 93.3 0.074 2.5E-06 54.6 5.2 77 179-255 52-145 (359)
347 3fbg_A Putative arginate lyase 93.1 0.087 3E-06 52.9 5.2 92 178-310 150-246 (346)
348 4eez_A Alcohol dehydrogenase 1 93.0 0.23 8E-06 49.4 8.3 98 175-311 160-262 (348)
349 2h6e_A ADH-4, D-arabinose 1-de 93.0 0.1 3.4E-06 52.3 5.5 99 175-312 168-269 (344)
350 3av4_A DNA (cytosine-5)-methyl 93.0 0.26 8.8E-06 58.5 9.7 83 178-267 850-947 (1330)
351 1rjw_A ADH-HT, alcohol dehydro 92.9 0.35 1.2E-05 48.3 9.3 97 175-311 161-260 (339)
352 3goh_A Alcohol dehydrogenase, 92.7 0.084 2.9E-06 52.1 4.5 67 174-255 138-205 (315)
353 3grk_A Enoyl-(acyl-carrier-pro 92.7 1.7 5.7E-05 42.4 13.9 145 159-314 13-171 (293)
354 3k31_A Enoyl-(acyl-carrier-pro 92.7 0.45 1.5E-05 46.5 9.7 140 162-313 16-169 (296)
355 1wma_A Carbonyl reductase [NAD 92.2 0.84 2.9E-05 42.9 10.7 80 178-259 3-92 (276)
356 3tjr_A Short chain dehydrogena 92.2 1 3.5E-05 44.0 11.6 126 178-313 30-168 (301)
357 3gms_A Putative NADPH:quinone 92.0 0.45 1.5E-05 47.4 8.8 74 174-255 140-219 (340)
358 2eih_A Alcohol dehydrogenase; 91.9 0.59 2E-05 46.6 9.6 96 175-311 163-264 (343)
359 4dup_A Quinone oxidoreductase; 91.8 0.3 1E-05 49.1 7.4 97 175-312 164-265 (353)
360 1xu9_A Corticosteroid 11-beta- 91.8 1.7 5.8E-05 41.8 12.5 78 178-256 27-113 (286)
361 3o38_A Short chain dehydrogena 91.7 1.6 5.6E-05 41.3 12.2 127 178-313 21-161 (266)
362 2d8a_A PH0655, probable L-thre 91.7 0.38 1.3E-05 48.1 7.9 98 174-311 164-266 (348)
363 1ja9_A 4HNR, 1,3,6,8-tetrahydr 91.5 1.2 4.2E-05 42.0 11.1 123 178-313 20-156 (274)
364 3rih_A Short chain dehydrogena 91.5 0.56 1.9E-05 46.0 8.8 81 178-259 40-129 (293)
365 4eye_A Probable oxidoreductase 91.4 0.23 7.7E-06 49.8 6.0 96 174-311 155-256 (342)
366 3ps9_A TRNA 5-methylaminomethy 91.4 0.82 2.8E-05 50.1 10.9 131 177-337 65-237 (676)
367 1g60_A Adenine-specific methyl 91.4 0.14 4.9E-06 49.5 4.3 90 232-337 6-95 (260)
368 3ioy_A Short-chain dehydrogena 91.3 0.91 3.1E-05 44.9 10.2 80 178-258 7-96 (319)
369 2b5w_A Glucose dehydrogenase; 91.3 0.2 6.7E-06 50.5 5.4 96 175-311 163-272 (357)
370 1fmc_A 7 alpha-hydroxysteroid 91.2 2.2 7.6E-05 39.8 12.3 80 178-259 10-98 (255)
371 2j8z_A Quinone oxidoreductase; 91.0 0.66 2.2E-05 46.6 8.9 98 175-312 159-261 (354)
372 3lf2_A Short chain oxidoreduct 91.0 3.2 0.00011 39.5 13.4 126 178-313 7-146 (265)
373 3o26_A Salutaridine reductase; 90.9 1.7 5.7E-05 41.8 11.5 82 178-260 11-102 (311)
374 2j3h_A NADP-dependent oxidored 90.6 0.37 1.3E-05 47.9 6.7 98 174-311 151-254 (345)
375 2cf5_A Atccad5, CAD, cinnamyl 90.5 0.28 9.7E-06 49.4 5.6 97 175-312 176-275 (357)
376 1xa0_A Putative NADPH dependen 90.5 0.49 1.7E-05 46.7 7.3 97 175-311 145-245 (328)
377 4b7c_A Probable oxidoreductase 90.4 0.31 1E-05 48.4 5.8 98 174-311 145-247 (336)
378 3qwb_A Probable quinone oxidor 90.4 0.47 1.6E-05 47.1 7.1 96 175-311 145-246 (334)
379 3jyn_A Quinone oxidoreductase; 90.4 0.83 2.8E-05 45.1 8.9 96 175-311 137-238 (325)
380 1y1p_A ARII, aldehyde reductas 90.4 4.8 0.00017 38.9 14.4 82 178-260 10-94 (342)
381 1yb1_A 17-beta-hydroxysteroid 90.2 4.2 0.00014 38.8 13.5 79 178-258 30-117 (272)
382 3pk0_A Short-chain dehydrogena 90.1 2.1 7.1E-05 40.8 11.2 80 178-258 9-97 (262)
383 1eg2_A Modification methylase 89.9 0.33 1.1E-05 48.7 5.5 49 176-227 240-291 (319)
384 1v3u_A Leukotriene B4 12- hydr 89.9 0.49 1.7E-05 46.9 6.7 99 174-311 141-243 (333)
385 1boo_A Protein (N-4 cytosine-s 89.9 0.26 9E-06 49.3 4.8 51 176-229 250-300 (323)
386 3ek2_A Enoyl-(acyl-carrier-pro 89.8 1.6 5.4E-05 41.3 10.0 128 177-313 12-154 (271)
387 1yqd_A Sinapyl alcohol dehydro 89.6 0.41 1.4E-05 48.4 6.0 97 175-312 183-282 (366)
388 3qiv_A Short-chain dehydrogena 89.6 2.4 8.1E-05 39.8 11.0 79 178-258 8-95 (253)
389 2c0c_A Zinc binding alcohol de 89.3 0.57 2E-05 47.2 6.8 98 174-312 159-261 (362)
390 2ae2_A Protein (tropinone redu 89.3 3.5 0.00012 39.0 12.0 79 178-258 8-96 (260)
391 4dry_A 3-oxoacyl-[acyl-carrier 89.2 3.4 0.00011 39.9 12.1 80 178-258 32-120 (281)
392 1jvb_A NAD(H)-dependent alcoho 89.2 1 3.5E-05 44.9 8.6 98 175-311 167-270 (347)
393 3krt_A Crotonyl COA reductase; 88.9 0.69 2.3E-05 48.2 7.3 52 174-231 224-277 (456)
394 3rkr_A Short chain oxidoreduct 88.9 4.5 0.00015 38.3 12.6 79 178-258 28-115 (262)
395 3lyl_A 3-oxoacyl-(acyl-carrier 88.9 4.8 0.00017 37.4 12.6 79 179-259 5-92 (247)
396 1gee_A Glucose 1-dehydrogenase 88.9 4.3 0.00015 38.0 12.3 79 178-258 6-94 (261)
397 3i1j_A Oxidoreductase, short c 88.8 4.8 0.00016 37.4 12.5 128 178-314 13-155 (247)
398 3t4x_A Oxidoreductase, short c 88.8 4.5 0.00015 38.5 12.5 81 178-259 9-95 (267)
399 2dq4_A L-threonine 3-dehydroge 88.7 0.47 1.6E-05 47.4 5.6 98 173-311 160-261 (343)
400 2jah_A Clavulanic acid dehydro 88.6 3 0.0001 39.2 11.0 78 179-258 7-93 (247)
401 3nx4_A Putative oxidoreductase 88.6 1.1 3.8E-05 44.0 8.2 95 176-311 143-240 (324)
402 1xg5_A ARPG836; short chain de 88.5 3.9 0.00014 39.0 11.9 80 178-258 31-120 (279)
403 1xhl_A Short-chain dehydrogena 88.5 3.4 0.00012 40.2 11.6 127 178-313 25-166 (297)
404 3gaf_A 7-alpha-hydroxysteroid 88.4 2.9 0.0001 39.6 10.9 124 178-313 11-147 (256)
405 1iz0_A Quinone oxidoreductase; 88.3 0.28 9.7E-06 48.0 3.6 92 176-311 123-217 (302)
406 1qor_A Quinone oxidoreductase; 88.3 1.5 5E-05 43.3 8.9 98 174-311 136-238 (327)
407 2cdc_A Glucose dehydrogenase g 88.3 0.54 1.9E-05 47.4 5.8 91 179-312 181-278 (366)
408 1mxh_A Pteridine reductase 2; 88.2 8.2 0.00028 36.6 14.0 79 179-259 11-104 (276)
409 1wly_A CAAR, 2-haloacrylate re 88.2 2.4 8.2E-05 41.8 10.4 97 174-311 141-243 (333)
410 3pxx_A Carveol dehydrogenase; 88.0 3 0.0001 39.8 10.7 121 178-313 9-154 (287)
411 3f9i_A 3-oxoacyl-[acyl-carrier 87.9 5 0.00017 37.4 12.0 79 177-260 12-95 (249)
412 3l77_A Short-chain alcohol deh 87.8 3.5 0.00012 38.1 10.8 78 179-258 2-89 (235)
413 3svt_A Short-chain type dehydr 87.5 4.8 0.00016 38.5 11.9 80 178-258 10-100 (281)
414 4egf_A L-xylulose reductase; s 87.5 4.2 0.00014 38.7 11.4 80 178-259 19-108 (266)
415 3is3_A 17BETA-hydroxysteroid d 87.4 6 0.0002 37.7 12.4 125 178-315 17-155 (270)
416 3ojo_A CAP5O; rossmann fold, c 87.4 2.5 8.6E-05 44.2 10.4 117 188-332 18-148 (431)
417 2hcy_A Alcohol dehydrogenase 1 87.4 0.48 1.7E-05 47.3 4.7 98 175-312 166-269 (347)
418 3h7a_A Short chain dehydrogena 87.4 2.7 9.2E-05 39.8 9.8 81 178-260 6-94 (252)
419 1geg_A Acetoin reductase; SDR 87.4 5.2 0.00018 37.6 11.9 77 180-258 3-88 (256)
420 2c07_A 3-oxoacyl-(acyl-carrier 87.3 6.5 0.00022 37.6 12.7 80 178-259 43-131 (285)
421 1eg2_A Modification methylase 87.2 0.2 6.7E-06 50.4 1.7 68 231-315 39-108 (319)
422 1yxm_A Pecra, peroxisomal tran 87.1 5.5 0.00019 38.3 12.1 80 178-258 17-109 (303)
423 1w6u_A 2,4-dienoyl-COA reducta 87.0 6.5 0.00022 37.7 12.5 79 178-258 25-113 (302)
424 3r1i_A Short-chain type dehydr 87.0 2.7 9.4E-05 40.5 9.8 80 178-259 31-119 (276)
425 1edo_A Beta-keto acyl carrier 86.8 6.3 0.00021 36.4 11.9 78 180-259 2-89 (244)
426 1yb5_A Quinone oxidoreductase; 86.6 2.1 7.1E-05 42.9 9.0 99 174-312 166-269 (351)
427 1xkq_A Short-chain reductase f 86.6 4 0.00014 39.1 10.7 81 178-259 5-96 (280)
428 2zb4_A Prostaglandin reductase 86.5 1.9 6.4E-05 43.1 8.6 99 174-311 154-259 (357)
429 2wsb_A Galactitol dehydrogenas 86.5 3.9 0.00013 38.1 10.3 79 178-261 10-97 (254)
430 3tfo_A Putative 3-oxoacyl-(acy 86.4 4.5 0.00015 38.8 11.0 78 179-258 4-90 (264)
431 3pgx_A Carveol dehydrogenase; 86.4 4.4 0.00015 38.8 10.9 127 178-314 14-166 (280)
432 3afn_B Carbonyl reductase; alp 86.3 2.1 7E-05 40.0 8.3 79 178-258 6-94 (258)
433 3l6e_A Oxidoreductase, short-c 86.3 6.6 0.00023 36.6 11.8 120 179-313 3-135 (235)
434 3r3s_A Oxidoreductase; structu 86.2 5.5 0.00019 38.6 11.6 125 178-314 48-187 (294)
435 3sx2_A Putative 3-ketoacyl-(ac 86.2 8.5 0.00029 36.6 12.8 79 178-258 12-111 (278)
436 1zem_A Xylitol dehydrogenase; 86.2 4.5 0.00015 38.3 10.7 79 178-258 6-93 (262)
437 1tt7_A YHFP; alcohol dehydroge 86.0 0.77 2.6E-05 45.4 5.3 97 175-311 146-246 (330)
438 3e8x_A Putative NAD-dependent 86.0 4.3 0.00015 37.5 10.2 71 178-258 20-93 (236)
439 3tqh_A Quinone oxidoreductase; 85.9 3 0.0001 41.0 9.6 94 174-311 148-244 (321)
440 1e7w_A Pteridine reductase; di 85.9 16 0.00055 35.1 14.8 63 178-242 8-73 (291)
441 3v2h_A D-beta-hydroxybutyrate 85.9 6.8 0.00023 37.7 12.0 125 179-313 25-163 (281)
442 3v2g_A 3-oxoacyl-[acyl-carrier 85.7 7.6 0.00026 37.1 12.2 124 178-314 30-167 (271)
443 3ftp_A 3-oxoacyl-[acyl-carrier 85.7 4.4 0.00015 38.8 10.4 80 178-259 27-115 (270)
444 4a0s_A Octenoyl-COA reductase/ 85.6 1.2 4.3E-05 46.0 6.9 52 174-231 216-269 (447)
445 3f1l_A Uncharacterized oxidore 85.6 6.1 0.00021 37.2 11.3 80 178-258 11-101 (252)
446 2hq1_A Glucose/ribitol dehydro 85.5 6.3 0.00022 36.4 11.2 78 179-258 5-92 (247)
447 2bgk_A Rhizome secoisolaricire 85.4 5.4 0.00018 37.6 10.9 78 178-258 15-101 (278)
448 3nyw_A Putative oxidoreductase 85.3 2.7 9.4E-05 39.7 8.7 80 179-259 7-97 (250)
449 4ibo_A Gluconate dehydrogenase 85.2 4.5 0.00015 38.8 10.2 80 178-259 25-113 (271)
450 4a27_A Synaptic vesicle membra 85.1 0.56 1.9E-05 46.9 3.8 96 174-312 138-238 (349)
451 3sju_A Keto reductase; short-c 85.0 6.8 0.00023 37.6 11.5 82 178-261 23-113 (279)
452 2ph3_A 3-oxoacyl-[acyl carrier 84.9 8.4 0.00029 35.4 11.7 79 181-260 3-91 (245)
453 4g81_D Putative hexonate dehyd 84.9 6.8 0.00023 37.8 11.4 126 178-313 8-146 (255)
454 3imf_A Short chain dehydrogena 84.8 6.1 0.00021 37.3 10.9 79 178-258 5-92 (257)
455 4e6p_A Probable sorbitol dehyd 84.8 7 0.00024 36.9 11.3 78 178-260 7-93 (259)
456 2qhx_A Pteridine reductase 1; 84.8 15 0.00051 36.2 14.1 63 178-242 45-110 (328)
457 4eso_A Putative oxidoreductase 84.8 5.7 0.0002 37.6 10.7 121 178-314 7-140 (255)
458 3ius_A Uncharacterized conserv 84.7 7.2 0.00025 36.8 11.4 66 180-258 6-72 (286)
459 2x9g_A PTR1, pteridine reducta 84.6 11 0.00038 36.1 12.8 78 179-258 23-115 (288)
460 3ucx_A Short chain dehydrogena 84.5 11 0.00038 35.6 12.7 78 178-257 10-96 (264)
461 3cxt_A Dehydrogenase with diff 84.4 6.1 0.00021 38.3 10.9 79 178-258 33-120 (291)
462 2b4q_A Rhamnolipids biosynthes 84.3 5.1 0.00017 38.5 10.2 78 178-258 28-114 (276)
463 2rhc_B Actinorhodin polyketide 84.3 9.1 0.00031 36.6 12.0 79 178-258 21-108 (277)
464 3guy_A Short-chain dehydrogena 84.2 7.5 0.00026 35.8 11.0 116 185-314 6-131 (230)
465 4dyv_A Short-chain dehydrogena 84.2 11 0.00036 36.2 12.5 125 178-313 27-164 (272)
466 2ehd_A Oxidoreductase, oxidore 84.2 5.9 0.0002 36.5 10.2 74 179-258 5-87 (234)
467 4fc7_A Peroxisomal 2,4-dienoyl 84.1 4.8 0.00016 38.5 9.9 80 178-258 26-114 (277)
468 3oid_A Enoyl-[acyl-carrier-pro 84.1 7.7 0.00026 36.7 11.3 79 178-258 3-91 (258)
469 1ae1_A Tropinone reductase-I; 84.1 6.9 0.00024 37.3 11.0 79 178-258 20-108 (273)
470 3oec_A Carveol dehydrogenase ( 83.9 8.5 0.00029 37.7 11.9 82 178-261 45-147 (317)
471 3pi7_A NADH oxidoreductase; gr 83.9 1.4 4.8E-05 43.9 6.2 96 177-311 162-262 (349)
472 2uvd_A 3-oxoacyl-(acyl-carrier 83.8 8.7 0.0003 35.8 11.4 78 179-258 4-91 (246)
473 3osu_A 3-oxoacyl-[acyl-carrier 83.8 11 0.00038 35.1 12.2 81 179-261 4-94 (246)
474 4da9_A Short-chain dehydrogena 83.8 6.4 0.00022 37.8 10.7 79 178-258 28-116 (280)
475 2gn4_A FLAA1 protein, UDP-GLCN 83.6 4.3 0.00015 40.3 9.6 75 178-258 20-100 (344)
476 3ksu_A 3-oxoacyl-acyl carrier 83.5 7.9 0.00027 36.7 11.1 124 178-314 10-149 (262)
477 3nzo_A UDP-N-acetylglucosamine 83.5 14 0.00048 37.4 13.7 79 179-258 35-121 (399)
478 3tsc_A Putative oxidoreductase 83.4 8.1 0.00028 36.8 11.2 80 178-259 10-111 (277)
479 3u5t_A 3-oxoacyl-[acyl-carrier 83.3 5.1 0.00017 38.3 9.7 124 178-314 26-163 (267)
480 3awd_A GOX2181, putative polyo 83.2 8.8 0.0003 35.7 11.2 79 178-258 12-99 (260)
481 2bd0_A Sepiapterin reductase; 83.2 7.9 0.00027 35.7 10.8 77 180-258 3-95 (244)
482 4dqx_A Probable oxidoreductase 83.0 11 0.00037 36.1 12.0 123 178-314 26-161 (277)
483 1vl8_A Gluconate 5-dehydrogena 83.0 7.1 0.00024 37.2 10.6 80 178-259 20-109 (267)
484 3qlj_A Short chain dehydrogena 82.8 6.9 0.00024 38.4 10.7 80 178-259 26-124 (322)
485 1hxh_A 3BETA/17BETA-hydroxyste 82.7 12 0.00041 35.0 12.0 120 179-313 6-138 (253)
486 3ijr_A Oxidoreductase, short c 82.6 14 0.00048 35.6 12.7 125 178-314 46-184 (291)
487 2p91_A Enoyl-[acyl-carrier-pro 82.5 9.1 0.00031 36.6 11.2 127 178-313 20-161 (285)
488 3v8b_A Putative dehydrogenase, 82.5 6.7 0.00023 37.8 10.3 80 178-259 27-115 (283)
489 3ai3_A NADPH-sorbose reductase 82.5 7.2 0.00025 36.7 10.3 78 179-258 7-94 (263)
490 3uve_A Carveol dehydrogenase ( 82.3 8.6 0.00029 36.7 10.9 79 178-258 10-113 (286)
491 3t7c_A Carveol dehydrogenase; 82.2 9.9 0.00034 36.8 11.4 79 178-258 27-126 (299)
492 1cyd_A Carbonyl reductase; sho 82.0 13 0.00043 34.2 11.7 76 178-259 6-86 (244)
493 2pd6_A Estradiol 17-beta-dehyd 81.9 5 0.00017 37.5 8.9 79 179-258 7-101 (264)
494 3enk_A UDP-glucose 4-epimerase 81.8 1.7 5.7E-05 42.4 5.7 79 179-258 5-87 (341)
495 2zat_A Dehydrogenase/reductase 81.7 12 0.00041 35.1 11.6 79 178-258 13-100 (260)
496 3d3w_A L-xylulose reductase; u 81.6 5.9 0.0002 36.6 9.2 75 178-258 6-85 (244)
497 1g0o_A Trihydroxynaphthalene r 81.6 13 0.00043 35.5 11.8 123 178-313 28-164 (283)
498 2a4k_A 3-oxoacyl-[acyl carrier 81.5 5.7 0.0002 37.8 9.2 121 178-314 5-138 (263)
499 1xq1_A Putative tropinone redu 81.5 9.5 0.00032 35.8 10.7 79 178-258 13-101 (266)
500 1zk4_A R-specific alcohol dehy 81.4 12 0.00041 34.5 11.3 78 178-258 5-91 (251)
No 1
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.9e-62 Score=497.68 Aligned_cols=309 Identities=38% Similarity=0.680 Sum_probs=275.8
Q ss_pred hHhHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEec
Q 010971 65 KLDLGSYYGYNEFLIGALVEMFPPVELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYD 144 (496)
Q Consensus 65 ~~~l~~~y~~p~wl~~~l~~~~~~~e~~~~lea~~~~~P~~iRvNtlk~~~~~l~~~L~~~Gv~~~p~~~~~~~gl~v~~ 144 (496)
.++|+..|+||.||+++|.+.|| +++.+|+++++.++|+++|||++|++++++.+.|.+.|+.++++ +|++.++.+..
T Consensus 7 ~~~l~~~~~~P~w~~~~~~~~~g-~~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~ 84 (315)
T 1ixk_A 7 MLDKLLRLGYSKLFADRYFQLWG-ERAIRIAEAMEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRV-PWAKEGFCLTR 84 (315)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHT-THHHHHHHHTTSCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEE-TTEEEEEEEEE
T ss_pred HHHHHHHhCCcHHHHHHHHHHcc-HHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeEC-CCCCceEEEeC
Confidence 35689999999999999999999 88999999999999999999999999999999999999999888 89999988765
Q ss_pred CCCCCCCCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 010971 145 SQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 145 ~~~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~ 224 (496)
.+.++..+++|..|+|++||.+|++++.+|++++|++|||+|||||++|++|++++++.+.|+|+|+++.+++.+++|++
T Consensus 85 ~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~ 164 (315)
T 1ixk_A 85 EPFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLS 164 (315)
T ss_dssp CSSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 54568899999999999999999999999999999999999999999999999999878999999999999999999999
Q ss_pred HcCCCeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010971 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 225 r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkp 304 (496)
++|+.++.+++.|+..++.. .+.||+||+||||||+|+++++|+++|.|+.+++..+..+|.++|.++.++| +|
T Consensus 165 ~~g~~~v~~~~~D~~~~~~~--~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~L----kp 238 (315)
T 1ixk_A 165 RLGVLNVILFHSSSLHIGEL--NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVL----KP 238 (315)
T ss_dssp HHTCCSEEEESSCGGGGGGG--CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHE----EE
T ss_pred HhCCCeEEEEECChhhcccc--cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence 99999999999999887642 3689999999999999999999999999999999999999999999999997 99
Q ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEec
Q 010971 305 GGYIVYSTCSIMVTENEAVIDYALKKRDVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 305 GG~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
||+|||||||++++|||++|.++|++++++++++. .+.+|+..|....+.+....|+|++||.+++||||+|+|+|.
T Consensus 239 GG~lv~stcs~~~~Ene~~v~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 239 GGILVYSTCSLEPEENEFVIQWALDNFDVELLPLK--YGEPALTNPFGIELSEEIKNARRLYPDVHETSGFFIAKIRKL 315 (315)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHSSEEEECCC--SSEECCSSGGGCCCCGGGGGSEEECTTTSSSCSEEEEEEEEC
T ss_pred CCEEEEEeCCCChHHhHHHHHHHHhcCCCEEecCC--ccccCcccccccccccccCCEEEECCCCCCcccEEEEEEEEC
Confidence 99999999999999999999999999999988874 333565555544455556789999999999999999999984
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=3.8e-60 Score=504.62 Aligned_cols=297 Identities=31% Similarity=0.447 Sum_probs=262.0
Q ss_pred HhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCC-eEEEEcCCCCCHHHHHHHHHHcCCccC---CCCcCCcccEEEecCC
Q 010971 71 YYGYNEFLIGALVEMFPPVELMELIESFEKPRP-ICLRTNTLKTRRRDLADVLINRGVNLD---PLSKWSKVGLVVYDSQ 146 (496)
Q Consensus 71 ~y~~p~wl~~~l~~~~~~~e~~~~lea~~~~~P-~~iRvNtlk~~~~~l~~~L~~~Gv~~~---p~~~~~~~gl~v~~~~ 146 (496)
.+++|.||+++|.+.||. ++.+|+++++.++| ++|||||+|+ +++.+.+ |+.++ |+ +|++.|++ . .
T Consensus 5 ~~~~P~w~~~~~~~~~g~-e~~~~~~a~~~~~~~~~lRvN~lk~--~~~~~~~---~~~~~~~~~~-~~~~~~~~--~-~ 74 (456)
T 3m4x_A 5 ATTLPQQFIKKYRLLLGE-EASDFFSALEQGSVKKGFRWNPLKP--AGLDMVQ---TYHSEELQPA-PYSNEGFL--G-T 74 (456)
T ss_dssp --CCCHHHHHHHHHHHGG-GHHHHHHHHHHCCCCCEEECCTTST--THHHHHH---HHTCSSCCBC-TTCTTEEE--S-C
T ss_pred hhhChHHHHHHHHHHhCH-HHHHHHHHcCCCCCCcEEEEcCccH--HHHHHhc---CCcccccCCC-CCCcceEE--c-C
Confidence 478999999999999995 69999999999999 9999999999 5665543 66666 77 89999987 2 2
Q ss_pred CCCCCCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc
Q 010971 147 VPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (496)
Q Consensus 147 ~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~ 226 (496)
.++.+++|..|+|++||++|++++.+|++++|++|||||||||+||++||+++++.|.|+|+|+++.|++.+++|++++
T Consensus 75 -~~~~~~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~ 153 (456)
T 3m4x_A 75 -VNGKSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW 153 (456)
T ss_dssp -CCTTSHHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred -CCCCChHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 3589999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred CCCeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 010971 227 GVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 227 g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG 306 (496)
|+.|+.+++.|+..++... .+.||+||+||||||+|+++++|+++|.|+.+++..++.+|++||.+|+++| +|||
T Consensus 154 g~~nv~v~~~Da~~l~~~~-~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~L----kpGG 228 (456)
T 3m4x_A 154 GVSNAIVTNHAPAELVPHF-SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKML----KNKG 228 (456)
T ss_dssp TCSSEEEECCCHHHHHHHH-TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTE----EEEE
T ss_pred CCCceEEEeCCHHHhhhhc-cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhc----CCCc
Confidence 9999999999998876433 3689999999999999999999999999999999999999999999999997 9999
Q ss_pred EEEEEeCCCCCcCCHHHHHHHHHhCCcEEeecCCcCC-CCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEecCC
Q 010971 307 YIVYSTCSIMVTENEAVIDYALKKRDVKLVPCGLDFG-RQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSN 385 (496)
Q Consensus 307 ~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~~~~~~~-~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~~ 385 (496)
+|||||||++++|||+||.++|++++++++++....+ .+|...|... +....++|++||.+++||||+|+|+|.+.
T Consensus 229 ~LvYsTCs~~~eEne~vv~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~r~~P~~~~~dGFF~A~l~k~~~ 305 (456)
T 3m4x_A 229 QLIYSTCTFAPEENEEIISWLVENYPVTIEEIPLTQSVSSGRSEWGSV---AGLEKTIRIWPHKDQGEGHFVAKLTFHGQ 305 (456)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHSSEEEECCCCSSCCEECCGGGSSS---TTGGGSEEECTTTSSSSCEEEEEEEECSC
T ss_pred EEEEEEeecccccCHHHHHHHHHhCCCEEEeccccccccccccccccc---cccCCeEEECCCCCCCcCeEEEEEEECCC
Confidence 9999999999999999999999999999988753221 1232223221 24466899999999999999999999865
Q ss_pred C
Q 010971 386 S 386 (496)
Q Consensus 386 ~ 386 (496)
.
T Consensus 306 ~ 306 (456)
T 3m4x_A 306 N 306 (456)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=2.4e-59 Score=499.24 Aligned_cols=299 Identities=32% Similarity=0.508 Sum_probs=267.5
Q ss_pred ChHHHHHHHHHhCCHHHHHHHHHHcCCC-CCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEecCCCCCCCC
Q 010971 74 YNEFLIGALVEMFPPVELMELIESFEKP-RPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGAT 152 (496)
Q Consensus 74 ~p~wl~~~l~~~~~~~e~~~~lea~~~~-~P~~iRvNtlk~~~~~l~~~L~~~Gv~~~p~~~~~~~gl~v~~~~~~i~~~ 152 (496)
+|.||+++|.+.|| +++.+|+++++.+ +|++|||||+|++++++.+.| |+.++++ +|++.|+++.. ...++.+
T Consensus 2 lP~w~~~~~~~~~g-~e~~~~l~a~~~~~~~~~lRvN~lk~~~~~~~~~l---~~~~~~~-~~~~~g~~l~~-~~~~~~~ 75 (464)
T 3m6w_A 2 LPKAFLSRMAELLG-EEFPAFLKALTEGKRTYGLRVNTLKLPPEAFQRIS---PWPLRPI-PWCQEGFYYPE-EARPGPH 75 (464)
T ss_dssp CCHHHHHHHHHHHG-GGHHHHHHHHHTSCCCCEEEECTTTCCHHHHHHHC---SSCCEEE-TTEEEEEECCT-TCCCSSS
T ss_pred CcHHHHHHHHHHHH-HHHHHHHHHcCCCCCCeEEEEcCCCCCHHHHHHHc---CCCceec-CCCCceEEECC-CCCcccC
Confidence 79999999999999 5699999999999 999999999999999998877 7888888 89999988643 3457899
Q ss_pred cccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEE
Q 010971 153 PEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTI 232 (496)
Q Consensus 153 ~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~ 232 (496)
++|..|.|++||++|++++.+|++++|++|||||||||++|++||+++++.|.|+|+|+++.|++.+++|++++|+. +.
T Consensus 76 ~~~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~ 154 (464)
T 3m6w_A 76 PFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LA 154 (464)
T ss_dssp HHHHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CE
T ss_pred hHHhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EE
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999 99
Q ss_pred EEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 233 VCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 233 v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+++.|+..++... .+.||+||+||||||+|+++++|+++|.|+++++..++.+|++||.+|+++| +|||+|||||
T Consensus 155 ~~~~Da~~l~~~~-~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~L----kpGG~LvysT 229 (464)
T 3m6w_A 155 VTQAPPRALAEAF-GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLL----GPGGVLVYST 229 (464)
T ss_dssp EECSCHHHHHHHH-CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTE----EEEEEEEEEE
T ss_pred EEECCHHHhhhhc-cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEe
Confidence 9999998876433 3689999999999999999999999999999999999999999999999997 9999999999
Q ss_pred CCCCCcCCHHHHHHHHHhC-CcEEeecCCcCC-CCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEecCCC
Q 010971 313 CSIMVTENEAVIDYALKKR-DVKLVPCGLDFG-RQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSNS 386 (496)
Q Consensus 313 CSi~~eENE~vV~~~L~~~-~~~lv~~~~~~~-~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~~~ 386 (496)
||++++|||++|.+||+++ +++++++....+ .+|...|... .+.+..++|++||.+++||||+|+|+|.+..
T Consensus 230 Cs~~~eEne~vv~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~~P~~~~~dGfF~A~l~k~~~~ 303 (464)
T 3m6w_A 230 CTFAPEENEGVVAHFLKAHPEFRLEDARLHPLFAPGVPEWGEG--NPELLKTARLWPHRLEGEGHFLARFRKEGGA 303 (464)
T ss_dssp SCCCGGGTHHHHHHHHHHCTTEEEECCCCSTTSEECCGGGTTT--CGGGGGSEEECTTTSSSSCEEEEEEEECSCC
T ss_pred ccCchhcCHHHHHHHHHHCCCcEEEecccccccccCccccccc--ccccCCeEEECCCCCCceeEEEEEEEECCCC
Confidence 9999999999999999998 799998754321 2233223221 1345678999999999999999999998543
No 4
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=1.5e-58 Score=495.63 Aligned_cols=301 Identities=35% Similarity=0.563 Sum_probs=263.0
Q ss_pred HhcChHHHHHHHHHhCCHH-HHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEecC---C
Q 010971 71 YYGYNEFLIGALVEMFPPV-ELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDS---Q 146 (496)
Q Consensus 71 ~y~~p~wl~~~l~~~~~~~-e~~~~lea~~~~~P~~iRvNtlk~~~~~l~~~L~~~Gv~~~p~~~~~~~gl~v~~~---~ 146 (496)
.|++|.||+++|.+.||.+ ++.+|+++++.++|++|||||+|++++++.+.|...|+.++++ +|++.|+.+... .
T Consensus 5 ~~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~ 83 (479)
T 2frx_A 5 TVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPI-PWCEEGFWIERDNEDA 83 (479)
T ss_dssp --CCCHHHHHHHGGGCC----CHHHHHHHTSCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEE-TTEEEEEC--------
T ss_pred cccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHcCCceeec-CCCCceEEEecCcccc
Confidence 5899999999999999987 6899999999999999999999999999999999999999998 899999876422 1
Q ss_pred CCCCCCcccccccEEEeCCcchhHHHhcCCC--CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 010971 147 VPIGATPEYMAGFYMLQSASSFLPVMALAPQ--EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 147 ~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~--~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~ 224 (496)
.+++.+++|..|.|++||++||+++.+|+++ +|++|||||||||++|++||+++++.|.|+|+|+++.|++.+++|++
T Consensus 84 ~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~ 163 (479)
T 2frx_A 84 LPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANIS 163 (479)
T ss_dssp -CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHH
T ss_pred cCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH
Confidence 2678899999999999999999999999998 99999999999999999999999888999999999999999999999
Q ss_pred HcCCCeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010971 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 225 r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkp 304 (496)
++|+.|+.+++.|+..++... .+.||+||+||||||+|+++++|+++|.|+++++..++.+|++||.+|+++| ||
T Consensus 164 r~g~~nv~~~~~D~~~~~~~~-~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L----kp 238 (479)
T 2frx_A 164 RCGISNVALTHFDGRVFGAAV-PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHAL----RP 238 (479)
T ss_dssp HHTCCSEEEECCCSTTHHHHS-TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHE----EE
T ss_pred HcCCCcEEEEeCCHHHhhhhc-cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhc----CC
Confidence 999999999999999876422 3689999999999999999999999999999999999999999999999997 99
Q ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHhCC-c-EEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEe
Q 010971 305 GGYIVYSTCSIMVTENEAVIDYALKKRD-V-KLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKK 382 (496)
Q Consensus 305 GG~LVYSTCSi~~eENE~vV~~~L~~~~-~-~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K 382 (496)
||+|||||||++++|||+||.++|++++ + +++++... .+|.... .....++|++||.+++||||+|+|+|
T Consensus 239 GG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~--~~~~~~~------~~~~g~~r~~P~~~~~dGfF~A~l~k 310 (479)
T 2frx_A 239 GGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDL--FPGANKA------LTEEGFLHVFPQIYDCEGFFVARLRK 310 (479)
T ss_dssp EEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTS--STTGGGG------BCTTSCEEECTTTTTSCCEEEEEEEE
T ss_pred CCEEEEecccCCcccCHHHHHHHHHHCCCceeccccccc--ccccccc------cccCCeEEECCCCCCcCccEEEEEEE
Confidence 9999999999999999999999999874 3 55554321 1222110 01245689999999999999999999
Q ss_pred cCC
Q 010971 383 MSN 385 (496)
Q Consensus 383 ~~~ 385 (496)
.++
T Consensus 311 ~~~ 313 (479)
T 2frx_A 311 TQA 313 (479)
T ss_dssp CSC
T ss_pred cCC
Confidence 864
No 5
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.2e-57 Score=481.62 Aligned_cols=299 Identities=33% Similarity=0.489 Sum_probs=273.7
Q ss_pred HhHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcC-CCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEec
Q 010971 66 LDLGSYYGYNEFLIGALVEMFPPVELMELIESFE-KPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYD 144 (496)
Q Consensus 66 ~~l~~~y~~p~wl~~~l~~~~~~~e~~~~lea~~-~~~P~~iRvNtlk~~~~~l~~~L~~~Gv~~~p~~~~~~~gl~v~~ 144 (496)
..++..|++|.||+++|.+.|| +++.+|+++++ .++|+++|||++|++++++.+.|.+.|+.+.+. +|++.++.+.
T Consensus 149 ~~~~~~~~~P~w~~~~~~~~~g-~~~~~~~~a~~~~~~~~~~Rvn~~k~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~- 225 (450)
T 2yxl_A 149 EELEWKYLAPSWLIERVKGILG-DETEDFFRSVNKRHEWISIRVNTLKANVEEVIGELEEDGVEVVRS-ERVPTILKIK- 225 (450)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHG-GGHHHHHHHHHCCCCEEEEEECTTTCCHHHHHHHHHHTTCCEEEC-SSCTTEEEEE-
T ss_pred hhhhhHhcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCCCEEEEEcCCCCCHHHHHHHHHhCCccceec-CccCceEEeC-
Confidence 4577889999999999999999 88999999999 999999999999999999999999999998887 8999998875
Q ss_pred CCCCCCCCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHH
Q 010971 145 SQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 145 ~~~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~ 224 (496)
....+..++.|..|+|++||.+|++++.++++++|++|||+|||||++|++|++++++.+.|+|+|+++.+++.+++|++
T Consensus 226 ~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~ 305 (450)
T 2yxl_A 226 GPYNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVK 305 (450)
T ss_dssp SCCCTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 33578899999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred HcCCCeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010971 225 RMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 225 r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkp 304 (496)
++|+.++.+++.|+..++..+..+.||+||+||||||+|+++++|+++|.+++.++..++.+|..+|.++.++| +|
T Consensus 306 ~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~L----kp 381 (450)
T 2yxl_A 306 RMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLV----KP 381 (450)
T ss_dssp HTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTE----EE
T ss_pred HcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence 99999999999999887644433679999999999999999999999999999999999999999999999987 99
Q ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHhC-CcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEec
Q 010971 305 GGYIVYSTCSIMVTENEAVIDYALKKR-DVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 305 GG~LVYSTCSi~~eENE~vV~~~L~~~-~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
||+|||+|||++++|||++|.++|+++ +++++++...+ +++ ....++|++||.+++||||+|+|+|.
T Consensus 382 GG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~~~~--~~~----------~~~~~~~~~P~~~~~dGff~a~l~k~ 449 (450)
T 2yxl_A 382 GGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLKSPY--DPG----------FLEGTMRAWPHRHSTIGFFYALLEKS 449 (450)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCCSSS--EEC----------SSTTCEEECHHHHSSCCEEEEEEECC
T ss_pred CcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEeeccccc--ccc----------cCCCeEEECCCCCCCCceEEEEEEEC
Confidence 999999999999999999999999987 79988764332 111 23567999999999999999999984
No 6
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=4.7e-56 Score=469.62 Aligned_cols=290 Identities=31% Similarity=0.448 Sum_probs=263.9
Q ss_pred hHHHHhcChHHHHHHHHHhCCHHHHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEecCC
Q 010971 67 DLGSYYGYNEFLIGALVEMFPPVELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQ 146 (496)
Q Consensus 67 ~l~~~y~~p~wl~~~l~~~~~~~e~~~~lea~~~~~P~~iRvNtlk~~~~~l~~~L~~~Gv~~~p~~~~~~~gl~v~~~~ 146 (496)
+++ .|++|.||+++|.+.|| +++.+|+++++.++|+++|||+++++++++.+.|...|+.+.+. +|++.++++. ..
T Consensus 139 ~~~-~~~~p~w~~~~~~~~~g-~~~~~~~~~~~~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~~-~~ 214 (429)
T 1sqg_A 139 SDA-RYLHPSWLLKRLQKAYP-EQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPH-ADYPDAVRLE-TP 214 (429)
T ss_dssp SGG-GGCSCHHHHHHHHHHCT-TTHHHHHHHHTSCCCEEEEECTTTCCHHHHHHHHHHTTCCEECC-TTCTTEEEES-SC
T ss_pred hhh-hhcCcHHHHHHHHHHhh-HHHHHHHHhCCCCCCeEEEEcCCCCCHHHHHHHHHhCCCceeec-CCCCCEEEEC-CC
Confidence 345 79999999999999999 78999999999999999999999999999999999999999887 8999998774 44
Q ss_pred CCCCCCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc
Q 010971 147 VPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (496)
Q Consensus 147 ~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~ 226 (496)
.++..+++|..|+|++||.+|++++.+|++++|++|||+|||||++|+++++++++ +.|+|+|+++.+++.+++|++++
T Consensus 215 ~~~~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~ 293 (429)
T 1sqg_A 215 APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRL 293 (429)
T ss_dssp CCGGGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHT
T ss_pred CCcccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHc
Confidence 57888999999999999999999999999999999999999999999999999876 89999999999999999999999
Q ss_pred CCCeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 010971 227 GVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 227 g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG 306 (496)
|+. +.+++.|+..++..+..+.||+||+||||||+|+++++|+++|.+++.++..++.+|.++|.+++++| +|||
T Consensus 294 g~~-~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~L----kpGG 368 (429)
T 1sqg_A 294 GMK-ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL----KTGG 368 (429)
T ss_dssp TCC-CEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGE----EEEE
T ss_pred CCC-eEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhc----CCCC
Confidence 984 68889999887654444689999999999999999999999999999999999999999999999987 9999
Q ss_pred EEEEEeCCCCCcCCHHHHHHHHHhC-CcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEec
Q 010971 307 YIVYSTCSIMVTENEAVIDYALKKR-DVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 307 ~LVYSTCSi~~eENE~vV~~~L~~~-~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
+|||||||++++||+.+|..+|+++ ++++++. |. ....+++++||.+++||||+|+|+|.
T Consensus 369 ~lvystcs~~~~ene~~v~~~l~~~~~~~~~~~-------~~----------~~~~~~~~~P~~~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 369 TLVYATCSVLPEENSLQIKAFLQRTADAELCET-------GT----------PEQPGKQNLPGAEEGDGFFYAKLIKK 429 (429)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHCTTCEECSS-------BC----------SSSBSEEECCCTTSCCSEEEEEEEC-
T ss_pred EEEEEECCCChhhHHHHHHHHHHhCCCCEEeCC-------CC----------CCCCeEEECCCCCCCCceEEEEEEEC
Confidence 9999999999999999999999987 7888761 11 01234799999999999999999873
No 7
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=4.2e-56 Score=452.26 Aligned_cols=273 Identities=32% Similarity=0.446 Sum_probs=220.7
Q ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCC------------------cccEEEecCCCCCCCCcccccccE
Q 010971 99 EKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWS------------------KVGLVVYDSQVPIGATPEYMAGFY 160 (496)
Q Consensus 99 ~~~~P~~iRvNtlk~~~~~l~~~L~~~Gv~~~p~~~~~------------------~~gl~v~~~~~~i~~~~~~~~G~~ 160 (496)
..++|+++||||+|++++++.+.|.+.|+.+++. +|+ +.++.+ ....++..+++|..|+|
T Consensus 7 ~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~~~~~~~~~~~~~G~~ 84 (309)
T 2b9e_A 7 ASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGR-ASSLDDLRALKGKHFLLDPLMPELLVF-PAQTDLHEHPLYRAGHL 84 (309)
T ss_dssp --CCCEEEEECTTTCCHHHHHHHHHHTTCEEEEE-CSSHHHHHTCCTTEEEECSSSTTEEEE-CTTCCCTTSHHHHTTSE
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeec-cccccccccccccccccccCCCceEEe-CCCCCcccChHHHCCeE
Confidence 4678999999999999999999999999988776 444 334443 33457889999999999
Q ss_pred EEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCC
Q 010971 161 MLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE 240 (496)
Q Consensus 161 ~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~ 240 (496)
++||.+|++++.+|++++|++|||||||||+||++||++|++.|.|+|+|+++.|++.+++|++++|+.|+.+++.|+..
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~ 164 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 164 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHh
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999987
Q ss_pred CccccC-CCCcCEEEECCCCCCCCcccCCchhhcc--CCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 241 LPKVLG-LNTVDRVLLDAPCSGTGVISKDESVKTS--KSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 241 ~~~~~~-~~~fD~VLlDaPCSg~G~i~r~p~~k~~--~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
++.... ...||+||+||||||+|+++++|+++|. ++++++..++.+|++||.+|++++ + ||+|||||||+++
T Consensus 165 ~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l----~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 165 VSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP----S-LQRLVYSTCSLCQ 239 (309)
T ss_dssp SCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCT----T-CCEEEEEESCCCG
T ss_pred cCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc----C-CCEEEEECCCCCh
Confidence 643211 1479999999999999999999999885 478899999999999999999875 6 9999999999999
Q ss_pred cCCHHHHHHHHHhC-C-cEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEecC
Q 010971 318 TENEAVIDYALKKR-D-VKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMS 384 (496)
Q Consensus 318 eENE~vV~~~L~~~-~-~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~ 384 (496)
+|||+||.+||+++ + ++++++...+...|+.. .+....|+|++||.+++||||+|+|+|.+
T Consensus 240 ~Ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~r~~P~~~~~dGfF~A~l~k~~ 302 (309)
T 2b9e_A 240 EENEDVVRDALQQNPGAFRLAPALPAWPHRGLST------FPGAEHCLRASPETTLSSGFFVAVIERVE 302 (309)
T ss_dssp GGTHHHHHHHHTTSTTTEEECCCCTTCCCBCCSS------STTGGGSEEECHHHHSSCSEEEEEEEEC-
T ss_pred HHhHHHHHHHHHhCCCcEEEeccccccccccccc------cCCCCCeEEECCCCCCCCCeEEEEEEECC
Confidence 99999999999987 5 89887643333233321 12345789999999999999999999975
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=1e-55 Score=457.43 Aligned_cols=290 Identities=26% Similarity=0.365 Sum_probs=231.6
Q ss_pred HhCCHHHHHHHHHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCc-----------cC--------CCC-cC-CcccE--
Q 010971 84 EMFPPVELMELIESFEKPRPICLRTNTLKTRRRDLADVLINRGVN-----------LD--------PLS-KW-SKVGL-- 140 (496)
Q Consensus 84 ~~~~~~e~~~~lea~~~~~P~~iRvNtlk~~~~~l~~~L~~~Gv~-----------~~--------p~~-~~-~~~gl-- 140 (496)
..|| ++|..|.+++..+++..+|+|++. ..+.+...|...|.. ++ |.. .| .+..+
T Consensus 29 ~~~G-~~W~~~r~aL~~~~~~~a~vN~f~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~ 106 (359)
T 4fzv_A 29 VQFG-DLWPSIRVSLLSEQKYGALVNNFA-AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRC 106 (359)
T ss_dssp HHHG-GGHHHHHHHHTSCCCCEEEECTTS-CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHHHHSCSSCCE
T ss_pred HHhh-hhhHHHHHHHcCcchhEEEeccCC-ChHHHHHHHHhccCccchhhhhcccccccccccccCCCcccccCCccceE
Confidence 4567 579999999999999999999985 568888888877652 00 000 11 11122
Q ss_pred EEecCCCCCCCCcccccc-----cEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHH
Q 010971 141 VVYDSQVPIGATPEYMAG-----FYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASR 215 (496)
Q Consensus 141 ~v~~~~~~i~~~~~~~~G-----~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~r 215 (496)
+++ ....+..+|.|..| .|++||++||+++.+|+|+||++||||||||||||+|||++|. .|.|+|+|+++.|
T Consensus 107 ~~~-~~g~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R 184 (359)
T 4fzv_A 107 FTF-DRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSR 184 (359)
T ss_dssp EEC-CTTCCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHH
T ss_pred Eec-CCCChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHH
Confidence 222 23356667776654 5888999999999999999999999999999999999999875 4889999999999
Q ss_pred HHHHHHHHHHcCC------CeEEEEecCCCCCccccCCCCcCEEEECCCCCCC--CcccCCchhhccCCHHHHHHHHHHH
Q 010971 216 LKSLTANLHRMGV------TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGT--GVISKDESVKTSKSLEDIQKCSYLQ 287 (496)
Q Consensus 216 l~~l~~nl~r~g~------~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~--G~i~r~p~~k~~~s~~~i~~l~~lQ 287 (496)
++.+++|++++|+ .++.+++.|++.++... .+.||+||+||||||+ |+++++|+++|.+++.++..++.+|
T Consensus 185 ~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~-~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ 263 (359)
T 4fzv_A 185 IARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE-GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQ 263 (359)
T ss_dssp HHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHH
T ss_pred HHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHH
Confidence 9999999999987 36899999999886543 3789999999999997 8899999999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhC-CcEEeec---CCcCCCCCcccccccccCCCcCCee
Q 010971 288 KQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR-DVKLVPC---GLDFGRQGFVRFREHRFHPSLEKTR 363 (496)
Q Consensus 288 ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~-~~~lv~~---~~~~~~~g~~~~~~~~f~~~~~~~~ 363 (496)
++||.+|+.+| ||||+|||||||++++|||+||++||+++ ++..+++ .+.....++ .....|.+....++
T Consensus 264 ~~iL~~a~~~l----kpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~g~ 337 (359)
T 4fzv_A 264 VQLLAAGLLAT----KPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVF--MDTFCFFSSCQVGE 337 (359)
T ss_dssp HHHHHHHHHTE----EEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEECCCHHHHHHH--TTTCEECTTCSSSE
T ss_pred HHHHHHHHhcC----CCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCccccccccccccccccc--ccccccCccccceE
Confidence 99999999997 99999999999999999999999999875 3222221 111000000 12234566777889
Q ss_pred EecCCCC-CCCceEEEEEEecC
Q 010971 364 RFYPHVH-NMDGFFVAKLKKMS 384 (496)
Q Consensus 364 r~~P~~~-~~dGFFvA~l~K~~ 384 (496)
|++||.+ ++||||+|+|+|.+
T Consensus 338 r~~P~~~~~~gGFFiA~L~KvS 359 (359)
T 4fzv_A 338 LVIPNLMANFGPMYFCKMRRLT 359 (359)
T ss_dssp EEECBTTBCCCCEEEEEEEECC
T ss_pred EECCCCCCCCCCEEEEEEEECC
Confidence 9999976 67889999999975
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=8.5e-50 Score=397.46 Aligned_cols=270 Identities=43% Similarity=0.642 Sum_probs=221.7
Q ss_pred HHHcCCCCCeEEEEcCCCCCHHHHHHHHHHcCCccCCCCcCCcccEEEecCCCCCCCCcccccccEEEeCCcchhHHHhc
Q 010971 95 IESFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMAL 174 (496)
Q Consensus 95 lea~~~~~P~~iRvNtlk~~~~~l~~~L~~~Gv~~~p~~~~~~~gl~v~~~~~~i~~~~~~~~G~~~iQd~sS~l~v~~L 174 (496)
|.++..++|+++|||+++++++++.+.|.+.|+.+++ +|++.++.+.+.+.++..++.|..|.|++||.+|++++.+|
T Consensus 2 m~~~~~~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l 79 (274)
T 3ajd_A 2 MIVYKGEKMQFIRVNTLKINPEVLKKRLENKGVVLEK--TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVL 79 (274)
T ss_dssp -------CCEEEEECTTTCCHHHHHHHHHTTTCEEEE--CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHH
T ss_pred hhhhCCCCCeEEEEeCCCCCHHHHHHHHHHCCCeecC--CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHh
Confidence 4566789999999999999999999999999998887 79999988744456788999999999999999999999999
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--CCCCcCE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDR 252 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--~~~~fD~ 252 (496)
++++|++|||+|||||++|+++++++++.+.|+|+|+++.+++.+++|++++|+.++.+++.|+..++..+ ..+.||+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 99999999999999999999999999877999999999999999999999999999999999998765321 1368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhC-
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR- 331 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~- 331 (496)
||+||||||+|+++++| .|+.+++..+...|.++|.+++++| +|||+|||+|||++++|||++|.++|+++
T Consensus 160 Vl~d~Pcs~~g~~~~~p----~~~~~~~~~~~~~~~~~l~~~~~~L----kpgG~lv~stcs~~~~ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNR----NVSEEDIKYCSLRQKELIDIGIDLL----KKDGELVYSTCSMEVEENEEVIKYILQKRN 231 (274)
T ss_dssp EEEEECCC----------------HHHHTGGGTCHHHHHHHHHHHE----EEEEEEEEEESCCCTTSSHHHHHHHHHHCS
T ss_pred EEEcCCCCCCcccccCC----CCCHHHHHHHHHHHHHHHHHHHHhC----CCCCEEEEEECCCChHHhHHHHHHHHHhCC
Confidence 99999999999999998 6788999999999999999999997 99999999999999999999999999876
Q ss_pred CcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEec
Q 010971 332 DVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 332 ~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
+++++++... ..+|+..|.. ....++|++||.++ ||+|+|+|.
T Consensus 232 ~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~P~~~~---ff~a~l~k~ 274 (274)
T 3ajd_A 232 DVELIIIKAN-EFKGINIKEG-----YIKGTLRVFPPNEP---FFIAKLRKI 274 (274)
T ss_dssp SEEEECCCST-TCTTSCEEEC-----SSTTCEEECTTSCC---EEEEEEEEC
T ss_pred CcEEecCccc-cccCcccccc-----cCCCeEEECCCCCC---EEEEEEEEC
Confidence 7898887532 1244433321 23578999999764 999999984
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.75 E-value=1.6e-18 Score=181.33 Aligned_cols=163 Identities=19% Similarity=0.222 Sum_probs=130.3
Q ss_pred CCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe
Q 010971 151 ATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (496)
Q Consensus 151 ~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n 230 (496)
....+++|.|+.|..+..++...+ ++|.+|||+|||+|++|+++|.. + ..|+|+|+|+.+++.+++|++.+|+.+
T Consensus 189 ~~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~al~~a~~n~~~ng~~~ 263 (393)
T 4dmg_A 189 LALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLEALGVLDQAALRLGLRV 263 (393)
T ss_dssp TTTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHHTCCC
T ss_pred chhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHHHHHHHHHHHHHhCCCC
Confidence 356788999999998877766543 46999999999999999999875 3 349999999999999999999999974
Q ss_pred EEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE
Q 010971 231 TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (496)
Q Consensus 231 v~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVY 310 (496)
.+.+.|+..+..... +.||+|++||||... +..++......+.+++..++++| +|||+|+|
T Consensus 264 -~~~~~D~~~~l~~~~-~~fD~Ii~dpP~f~~-------------~~~~~~~~~~~~~~ll~~a~~~L----kpGG~Lv~ 324 (393)
T 4dmg_A 264 -DIRHGEALPTLRGLE-GPFHHVLLDPPTLVK-------------RPEELPAMKRHLVDLVREALRLL----AEEGFLWL 324 (393)
T ss_dssp -EEEESCHHHHHHTCC-CCEEEEEECCCCCCS-------------SGGGHHHHHHHHHHHHHHHHHTE----EEEEEEEE
T ss_pred -cEEEccHHHHHHHhc-CCCCEEEECCCcCCC-------------CHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEE
Confidence 355888876543332 349999999998442 33467778888899999999987 99999999
Q ss_pred EeCCCCCcCCH--HHHHHHHHhC--CcEEee
Q 010971 311 STCSIMVTENE--AVIDYALKKR--DVKLVP 337 (496)
Q Consensus 311 STCSi~~eENE--~vV~~~L~~~--~~~lv~ 337 (496)
+|||....+++ .+|..++... .++++.
T Consensus 325 ~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~ 355 (393)
T 4dmg_A 325 SSCSYHLRLEDLLEVARRAAADLGRRLRVHR 355 (393)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EECCCCCCHHHHHHHHHHHHHHhCCeEEEEE
Confidence 99999988877 6676666543 455554
No 11
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.73 E-value=1.5e-17 Score=162.27 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=104.7
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc-cCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~-~~~~~fD~V 253 (496)
.+++|++|||+|||||++|.++|+++++.|.|+|+|+++.+++.+...+.+. .|+.++.+|++..... ...+.||+|
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEE
Confidence 3789999999999999999999999988899999999999987777666553 5899999999865321 113689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHH-hhhhcCCCCcEEEEE---eC---CCCCcCCHHHHHH
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID-MVDANSKSGGYIVYS---TC---SIMVTENEAVIDY 326 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~-~l~~~lkpGG~LVYS---TC---Si~~eENE~vV~~ 326 (496)
++|+|- ..|.++|...+. +| ||||+||++ +| ++.++||...+..
T Consensus 151 ~~d~a~-------------------------~~~~~il~~~~~~~L----kpGG~lvisik~~~~d~t~~~~e~~~~~~~ 201 (232)
T 3id6_C 151 YVDIAQ-------------------------PDQTDIAIYNAKFFL----KVNGDMLLVIKARSIDVTKDPKEIYKTEVE 201 (232)
T ss_dssp EECCCC-------------------------TTHHHHHHHHHHHHE----EEEEEEEEEEC-------CCSSSSTTHHHH
T ss_pred EecCCC-------------------------hhHHHHHHHHHHHhC----CCCeEEEEEEccCCcccCCCHHHHHHHHHH
Confidence 999871 124455554444 65 999999977 89 9999999999999
Q ss_pred HHHhCCcEEeec
Q 010971 327 ALKKRDVKLVPC 338 (496)
Q Consensus 327 ~L~~~~~~lv~~ 338 (496)
+|+.++|+++..
T Consensus 202 ~L~~~gf~~~~~ 213 (232)
T 3id6_C 202 KLENSNFETIQI 213 (232)
T ss_dssp HHHHTTEEEEEE
T ss_pred HHHHCCCEEEEE
Confidence 999888887764
No 12
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.69 E-value=9.7e-16 Score=149.94 Aligned_cols=166 Identities=16% Similarity=0.178 Sum_probs=116.3
Q ss_pred cccEEEeCCc-------chhHHHhcCCC-CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC
Q 010971 157 AGFYMLQSAS-------SFLPVMALAPQ-EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (496)
Q Consensus 157 ~G~~~iQd~s-------S~l~v~~L~~~-~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~ 228 (496)
.++.++|+.. +.+.+.++.+. ++.+|||+|||+|..++.+++... +.|+|+|+++..++.+++|+..+++
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCC
Confidence 3556667766 56777777888 899999999999999999988742 4999999999999999999999999
Q ss_pred C-eEEEEecCCCCCccccCCCCcCEEEECCCCCCC---CcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010971 229 T-NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGT---GVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 229 ~-nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~---G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkp 304 (496)
. ++.+++.|+..++..+..+.||+|++||||... |....++....... ........++..+.++| +|
T Consensus 98 ~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~-----~~~~~~~~~l~~~~~~L----kp 168 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARH-----EVMCTLEDTIRVAASLL----KQ 168 (259)
T ss_dssp TTTEEEECSCGGGGGGTSCTTCEEEEEECCCC----------------------------HHHHHHHHHHHHHE----EE
T ss_pred cccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhc-----cccCCHHHHHHHHHHHc----cC
Confidence 7 499999999887654445789999999999766 44433322211110 01122346788888886 99
Q ss_pred CcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEee
Q 010971 305 GGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 305 GG~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~ 337 (496)
||++++. .+.+....+..++...++.+..
T Consensus 169 gG~l~~~----~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 169 GGKANFV----HRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp EEEEEEE----ECTTTHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEE----EcHHHHHHHHHHHHHCCCceEE
Confidence 9999984 3445555566667776655443
No 13
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.68 E-value=2.7e-17 Score=170.73 Aligned_cols=163 Identities=24% Similarity=0.284 Sum_probs=128.6
Q ss_pred CCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe
Q 010971 151 ATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (496)
Q Consensus 151 ~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n 230 (496)
....+..|+|+.|...+.+... . +|.+|||+|||+|+.+++++.. .+.|+++|+++..++.+++|+..+|+.+
T Consensus 186 ~~~~~~~g~f~~~~~~~~~~~~---~-~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~ 258 (382)
T 1wxx_A 186 LRAGQKTGAYLDQRENRLYMER---F-RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN 258 (382)
T ss_dssp CSTTSCCCCCGGGHHHHHHGGG---C-CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT
T ss_pred chhcccCccccchHHHHHHHHh---c-CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC
Confidence 3456778988888766544333 3 7899999999999999999987 3689999999999999999999999999
Q ss_pred EEEEecCCCCCcccc--CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEE
Q 010971 231 TIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYI 308 (496)
Q Consensus 231 v~v~~~D~~~~~~~~--~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~L 308 (496)
+.++++|+..+...+ ....||+|++|||+.+.+ ...+......+..++..++++| +|||+|
T Consensus 259 ~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~-------------~~~~~~~~~~~~~~l~~~~~~L----kpgG~l 321 (382)
T 1wxx_A 259 VRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKG-------------KKDVERAYRAYKEVNLRAIKLL----KEGGIL 321 (382)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCS-------------TTSHHHHHHHHHHHHHHHHHTE----EEEEEE
T ss_pred ceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCC-------------hhHHHHHHHHHHHHHHHHHHhc----CCCCEE
Confidence 999999987653321 136899999999986543 2345566777888999999987 999999
Q ss_pred EEEeCCCCCcCC--HHHHHHHHHhC--CcEEee
Q 010971 309 VYSTCSIMVTEN--EAVIDYALKKR--DVKLVP 337 (496)
Q Consensus 309 VYSTCSi~~eEN--E~vV~~~L~~~--~~~lv~ 337 (496)
+|+||+....++ +.++...+... .++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 354 (382)
T 1wxx_A 322 ATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVE 354 (382)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 999999888765 56666555544 456654
No 14
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.67 E-value=6.3e-17 Score=180.69 Aligned_cols=174 Identities=14% Similarity=0.124 Sum_probs=130.3
Q ss_pred CCcccEEEecCCCCCCCCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHH
Q 010971 135 WSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKAS 214 (496)
Q Consensus 135 ~~~~gl~v~~~~~~i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~ 214 (496)
+.+.|+.+. +.....+.+|.|+.|.....++.... +|.+|||+|||+|+.|++++. .+...|+++|+|+.
T Consensus 504 v~E~g~~~~-----v~~~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~--~ga~~V~aVD~s~~ 573 (703)
T 3v97_A 504 VTEYNAHLW-----VNLTDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGL--GGARSTTTVDMSRT 573 (703)
T ss_dssp EEETTEEEE-----ECSSSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHH--TTCSEEEEEESCHH
T ss_pred EEECCEEEE-----EeccccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHH--CCCCEEEEEeCCHH
Confidence 445676652 22345678899999998777766543 689999999999999998886 34568999999999
Q ss_pred HHHHHHHHHHHcCCC--eEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHH
Q 010971 215 RLKSLTANLHRMGVT--NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLIL 292 (496)
Q Consensus 215 rl~~l~~nl~r~g~~--nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~ 292 (496)
.++.+++|++.+|+. ++.++++|+..+.... .+.||+|++||||.+.+.. ..++......+.+|+.
T Consensus 574 al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~-~~~fD~Ii~DPP~f~~~~~-----------~~~~~~~~~~~~~ll~ 641 (703)
T 3v97_A 574 YLEWAERNLRLNGLTGRAHRLIQADCLAWLREA-NEQFDLIFIDPPTFSNSKR-----------MEDAFDVQRDHLALMK 641 (703)
T ss_dssp HHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC-CCCEEEEEECCCSBC------------------CCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCccceEEEecCHHHHHHhc-CCCccEEEECCccccCCcc-----------chhHHHHHHHHHHHHH
Confidence 999999999999997 6999999987753322 3689999999999764421 0111234456788999
Q ss_pred HHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEeec
Q 010971 293 AAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 293 ~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~~ 338 (496)
.+.++| +|||+|++|+|+-....+++. +...++++..+
T Consensus 642 ~a~~~L----kpgG~L~~s~~~~~~~~~~~~----l~~~g~~~~~i 679 (703)
T 3v97_A 642 DLKRLL----RAGGTIMFSNNKRGFRMDLDG----LAKLGLKAQEI 679 (703)
T ss_dssp HHHHHE----EEEEEEEEEECCTTCCCCHHH----HHHTTEEEEEC
T ss_pred HHHHhc----CCCcEEEEEECCcccccCHHH----HHHcCCceeee
Confidence 999987 999999999999666666543 45566665444
No 15
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.66 E-value=1.6e-16 Score=165.52 Aligned_cols=159 Identities=21% Similarity=0.204 Sum_probs=123.6
Q ss_pred cccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eE
Q 010971 153 PEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NT 231 (496)
Q Consensus 153 ~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv 231 (496)
..+..|+|..|.....++..++ ++|.+|||+|||+|+.+++++.. +.+.|+++|+++..++.+++|+..+|+. ++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 3567788877766555444332 47899999999999999999875 3468999999999999999999999998 79
Q ss_pred EEEecCCCCCcccc--CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEE
Q 010971 232 IVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV 309 (496)
Q Consensus 232 ~v~~~D~~~~~~~~--~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LV 309 (496)
.++..|+..+...+ ....||+|++|||+.+. +...+......+..++..++.+| +|||+|+
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~-------------~~~~~~~~~~~~~~~l~~~~~~L----kpgG~lv 332 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQ-------------HEKDLKAGLRAYFNVNFAGLNLV----KDGGILV 332 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCS-------------SGGGHHHHHHHHHHHHHHHHTTE----EEEEEEE
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCCCCCC-------------CHHHHHHHHHHHHHHHHHHHHhc----CCCcEEE
Confidence 99999987653221 13689999999997653 23345566677888999999987 9999999
Q ss_pred EEeCCCCCcCC--HHHHHHHHHhCC
Q 010971 310 YSTCSIMVTEN--EAVIDYALKKRD 332 (496)
Q Consensus 310 YSTCSi~~eEN--E~vV~~~L~~~~ 332 (496)
|+||+.+..++ +.++...+...+
T Consensus 333 ~~~~~~~~~~~~~~~~v~~~~~~~~ 357 (396)
T 2as0_A 333 TCSCSQHVDLQMFKDMIIAAGAKAG 357 (396)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHHcC
Confidence 99999876543 566665555544
No 16
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.64 E-value=7.5e-17 Score=168.09 Aligned_cols=167 Identities=17% Similarity=0.192 Sum_probs=127.1
Q ss_pred CCCCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC
Q 010971 149 IGATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (496)
Q Consensus 149 i~~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~ 228 (496)
+.....+.+|+|..|.....++..+ .+|.+|||+|||+|++++++|.. +.+.|+++|+++..++.+++|+..+|+
T Consensus 194 v~~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl 268 (396)
T 3c0k_A 194 VDIQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKL 268 (396)
T ss_dssp ECTTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred EeccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3445678889998888776665554 57899999999999999999875 346899999999999999999999999
Q ss_pred -C-eEEEEecCCCCCcccc--CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 010971 229 -T-NTIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 229 -~-nv~v~~~D~~~~~~~~--~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkp 304 (496)
. ++.++..|+..+...+ ....||+|++|||+.+.+-- .+......+..++..++.+| +|
T Consensus 269 ~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~-------------~~~~~~~~~~~~l~~~~~~L----kp 331 (396)
T 3c0k_A 269 DLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKS-------------QLMGACRGYKDINMLAIQLL----NE 331 (396)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSS-------------SSSCCCTHHHHHHHHHHHTE----EE
T ss_pred CccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChh-------------HHHHHHHHHHHHHHHHHHhc----CC
Confidence 7 8999999987653221 13589999999998664310 01112234567888899887 99
Q ss_pred CcEEEEEeCCCCCc--CCHHHHHHHHHhC--CcEEee
Q 010971 305 GGYIVYSTCSIMVT--ENEAVIDYALKKR--DVKLVP 337 (496)
Q Consensus 305 GG~LVYSTCSi~~e--ENE~vV~~~L~~~--~~~lv~ 337 (496)
||+|++|+|+.+.. ++..++...+... .++++.
T Consensus 332 gG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 368 (396)
T 3c0k_A 332 GGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIE 368 (396)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 99999999998776 5677887655544 455554
No 17
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.63 E-value=7.4e-17 Score=167.91 Aligned_cols=188 Identities=14% Similarity=0.049 Sum_probs=123.3
Q ss_pred EeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc---------------
Q 010971 162 LQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--------------- 226 (496)
Q Consensus 162 iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--------------- 226 (496)
.|.....+.+.++...+|.+|||+|||+|..+++++..+++ ..|+++|+++.+++.+++|++++
T Consensus 31 ~~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~~-~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~ 109 (378)
T 2dul_A 31 RMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILK 109 (378)
T ss_dssp GGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSC-SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEE
T ss_pred chHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhccccccccccccccc
Confidence 34444444333333237899999999999999999998754 57999999999999999999999
Q ss_pred CCCeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 010971 227 GVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 227 g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG 306 (496)
|+.++.+++.|+..+.... ...||+|++||||+. ..+|..|++.+ ++||
T Consensus 110 gl~~i~v~~~Da~~~~~~~-~~~fD~I~lDP~~~~--------------------------~~~l~~a~~~l----k~gG 158 (378)
T 2dul_A 110 GEKTIVINHDDANRLMAER-HRYFHFIDLDPFGSP--------------------------MEFLDTALRSA----KRRG 158 (378)
T ss_dssp SSSEEEEEESCHHHHHHHS-TTCEEEEEECCSSCC--------------------------HHHHHHHHHHE----EEEE
T ss_pred CCCceEEEcCcHHHHHHhc-cCCCCEEEeCCCCCH--------------------------HHHHHHHHHhc----CCCC
Confidence 8888999999997764332 257999999999863 25688888887 9999
Q ss_pred EEEEEeCCCCCcCCHHHHHHHHHhCCcEEeecCCcCCCCCcccc-cccccCCCcCCeeEecCCCCCCCceEEEEEEecC
Q 010971 307 YIVYSTCSIMVTENEAVIDYALKKRDVKLVPCGLDFGRQGFVRF-REHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMS 384 (496)
Q Consensus 307 ~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~~~~~~~~~g~~~~-~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~ 384 (496)
++|.||+-....+.......+.+++.......... ..+.... .... .......+.+.|.....+|||++++.|.-
T Consensus 159 -~l~vt~td~~~l~~~~~~~~~~~yg~~p~~~~~~~-e~~~ri~l~~~~-~~~~~~g~~i~P~~~~~~~~y~rv~vrv~ 234 (378)
T 2dul_A 159 -ILGVTATDGAPLCGAHPRACLRKYLAVPLRGELCH-EVGTRILVGVIA-RYAAKYDLGIDVILAYYKDHYFRAFVKLK 234 (378)
T ss_dssp -EEEEEECCHHHHTTSSHHHHHHHHSSBCCCSTTHH-HHHHHHHHHHHH-HHHHTTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred -EEEEEeecchhhccccHHHHHHHccCCCccccccc-chhHHHHHHHHH-HhcCcCCcEEEEEEEEecCCEEEEEEEEe
Confidence 78899975543222234444555443222110000 0000000 0000 00001235677766667899999998764
No 18
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.63 E-value=1.8e-15 Score=143.98 Aligned_cols=167 Identities=16% Similarity=0.155 Sum_probs=117.5
Q ss_pred CCCHHHHHHHHHHcCCccCCC----------CcCCcccEEEecCCCCCCCCcccccccEEEeCCcch-hHHHhcC--CCC
Q 010971 112 KTRRRDLADVLINRGVNLDPL----------SKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSF-LPVMALA--PQE 178 (496)
Q Consensus 112 k~~~~~l~~~L~~~Gv~~~p~----------~~~~~~gl~v~~~~~~i~~~~~~~~G~~~iQd~sS~-l~v~~L~--~~~ 178 (496)
.++++++.+.|...|+..++. ..|.+.+ .....+.+..+...++++... ....++. +.+
T Consensus 6 ~~~~~~l~~~l~~~g~~~~~~~~~a~~~~~r~~f~~~~--------~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~ 77 (226)
T 1i1n_A 6 GASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--------PYMDSPQSIGFQATISAPHMHAYALELLFDQLHE 77 (226)
T ss_dssp CSSHHHHHHHHHHTTSCCSHHHHHHHHTSCGGGTCSSC--------TTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCT
T ss_pred CchHHHHHHHHHHcCCcCCHHHHHHHHhCCHHHcCCCc--------cCCCCccccCCCceecCHHHHHHHHHHHHhhCCC
Confidence 356789999999999853221 0121111 112223333333445554421 2233443 778
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC-----CCeEEEEecCCCCCccccCCCCcCEE
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g-----~~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
+.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++++.++| ..++.+...|+...+.. ...||+|
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~fD~i 155 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE--EAPYDAI 155 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc--CCCcCEE
Confidence 9999999999999999999998666799999999999999999999977 46799999998754322 3679999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTEN 320 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eEN 320 (496)
++++||.. ++..+.+.| +|||+||+++|+...+++
T Consensus 156 ~~~~~~~~----------------------------~~~~~~~~L----kpgG~lv~~~~~~~~~~~ 190 (226)
T 1i1n_A 156 HVGAAAPV----------------------------VPQALIDQL----KPGGRLILPVGPAGGNQM 190 (226)
T ss_dssp EECSBBSS----------------------------CCHHHHHTE----EEEEEEEEEESCTTSCEE
T ss_pred EECCchHH----------------------------HHHHHHHhc----CCCcEEEEEEecCCCceE
Confidence 99998721 234555665 999999999998765444
No 19
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.60 E-value=3.6e-15 Score=142.18 Aligned_cols=169 Identities=14% Similarity=0.148 Sum_probs=118.5
Q ss_pred EeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCC
Q 010971 162 LQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNE 240 (496)
Q Consensus 162 iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~ 240 (496)
+++....+...++...++.+|||+|||+|..|++++..+++.+.|+++|+++..++.+++|+.++|+.+ +.++.+|+..
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 344444555555556678999999999999999999988767899999999999999999999999974 9999999865
Q ss_pred CccccC----CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 241 LPKVLG----LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 241 ~~~~~~----~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+...+. .+.||+|++|+++... ....+++..+ ++ |+|||+||+.+|.+.
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~----------------------~~~~~~~~~~-~~----LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRY----------------------LPDTLLLEKC-GL----LRKGTVLLADNVIVP 174 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGH----------------------HHHHHHHHHT-TC----CCTTCEEEESCCCCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccc----------------------hHHHHHHHhc-cc----cCCCeEEEEeCCCCc
Confidence 422222 1589999999763210 1112334443 44 599999999998853
Q ss_pred CcCCHHHHHHHHHhCCcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEec
Q 010971 317 VTENEAVIDYALKKRDVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKM 383 (496)
Q Consensus 317 ~eENE~vV~~~L~~~~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~ 383 (496)
......+++.....++...+ -..+|.....|||++++++..
T Consensus 175 --~~~~~~~~l~~~~~~~~~~~------------------------~~~~~~~~~~dG~~~~~~~g~ 215 (221)
T 3u81_A 175 --GTPDFLAYVRGSSSFECTHY------------------------SSYLEYMKVVDGLEKAIYQGP 215 (221)
T ss_dssp --CCHHHHHHHHHCTTEEEEEE------------------------EEEETTTTEEEEEEEEEECCC
T ss_pred --chHHHHHHHhhCCCceEEEc------------------------ccccccCCCCCceEEEEEeCC
Confidence 34555555444333332211 123455567899999998754
No 20
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.59 E-value=8.4e-15 Score=144.58 Aligned_cols=158 Identities=12% Similarity=0.101 Sum_probs=115.5
Q ss_pred EEEeCCcchhHHHhcCC--CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecC
Q 010971 160 YMLQSASSFLPVMALAP--QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~--~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D 237 (496)
++.+..+..++..++.. .++.+|||+|||+|..+..++..++ ...|+|+|+|+..++.+++|+.++|+.++.+.+.|
T Consensus 89 ~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d 167 (276)
T 2b3t_A 89 LIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSD 167 (276)
T ss_dssp CCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCS
T ss_pred cccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc
Confidence 33333344444333321 5788999999999999999998874 47999999999999999999999999899999999
Q ss_pred CCCCccccCCCCcCEEEECCCCCCCC-------cccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE
Q 010971 238 GNELPKVLGLNTVDRVLLDAPCSGTG-------VISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (496)
Q Consensus 238 ~~~~~~~~~~~~fD~VLlDaPCSg~G-------~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVY 310 (496)
..... ..+.||+|+++|||.+.+ ++...|...+.-..+. ...+..++..+.++| +|||++++
T Consensus 168 ~~~~~---~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g----~~~~~~~l~~~~~~L----kpgG~l~~ 236 (276)
T 2b3t_A 168 WFSAL---AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSG----MADIVHIIEQSRNAL----VSGGFLLL 236 (276)
T ss_dssp TTGGG---TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHH----THHHHHHHHHHGGGE----EEEEEEEE
T ss_pred hhhhc---ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcH----HHHHHHHHHHHHHhc----CCCCEEEE
Confidence 87642 236899999999999874 4445555544322222 234467888888876 99999999
Q ss_pred EeCCCCCcCCHHHHHHHHHhCCc
Q 010971 311 STCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 311 STCSi~~eENE~vV~~~L~~~~~ 333 (496)
..+. .+.+.+..+++..++
T Consensus 237 ~~~~----~~~~~~~~~l~~~Gf 255 (276)
T 2b3t_A 237 EHGW----QQGEAVRQAFILAGY 255 (276)
T ss_dssp ECCS----SCHHHHHHHHHHTTC
T ss_pred EECc----hHHHHHHHHHHHCCC
Confidence 7543 345556666766544
No 21
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.59 E-value=1.5e-15 Score=148.06 Aligned_cols=121 Identities=14% Similarity=0.174 Sum_probs=96.1
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCC-ccc
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL-PKV 244 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~-~~~ 244 (496)
..+...++...++.+|||+|||+|..|.+++..+++.+.|+++|+++.+++.+++++.+.|+. ++.+..+|+..+ +..
T Consensus 52 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~ 131 (248)
T 3tfw_A 52 GQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL 131 (248)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC
T ss_pred HHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc
Confidence 344444445567899999999999999999999876789999999999999999999999997 699999998764 322
Q ss_pred cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 245 ~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
...+.||+|++|+++.. ...+|..+.++| +|||+||+.++.+.
T Consensus 132 ~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~L----kpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 132 GECPAFDLIFIDADKPN-------------------------NPHYLRWALRYS----RPGTLIIGDNVVRD 174 (248)
T ss_dssp CSCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTC----CTTCEEEEECCSGG
T ss_pred CCCCCeEEEEECCchHH-------------------------HHHHHHHHHHhc----CCCeEEEEeCCCcC
Confidence 21248999999986321 123567777775 99999999988765
No 22
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.56 E-value=7.3e-14 Score=143.04 Aligned_cols=139 Identities=21% Similarity=0.257 Sum_probs=111.0
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCc
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~f 250 (496)
+.++.+.++.+|||+|||+|+.++.++...++.+.|+++|+++..++.+++|+...|+.++.+.+.|+..++... ..|
T Consensus 196 ~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~--~~~ 273 (354)
T 3tma_A 196 LRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF--PEV 273 (354)
T ss_dssp HHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC--CCC
T ss_pred HHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc--CCC
Confidence 344567889999999999999999999887445789999999999999999999999989999999999886433 569
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHh
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~ 330 (496)
|+|++||||.- .......+..++..++..+.+.| +|||+++++|| |+..+..+++
T Consensus 274 D~Ii~npPyg~--------------r~~~~~~~~~~~~~~~~~~~~~L----kpgG~l~i~t~------~~~~~~~~~~- 328 (354)
T 3tma_A 274 DRILANPPHGL--------------RLGRKEGLFHLYWDFLRGALALL----PPGGRVALLTL------RPALLKRALP- 328 (354)
T ss_dssp SEEEECCCSCC------------------CHHHHHHHHHHHHHHHHTS----CTTCEEEEEES------CHHHHHHHCC-
T ss_pred CEEEECCCCcC--------------ccCCcccHHHHHHHHHHHHHHhc----CCCcEEEEEeC------CHHHHHHHhh-
Confidence 99999999832 11112345667788888888876 99999999998 4666777665
Q ss_pred CCcEEe
Q 010971 331 RDVKLV 336 (496)
Q Consensus 331 ~~~~lv 336 (496)
.+++..
T Consensus 329 ~g~~~~ 334 (354)
T 3tma_A 329 PGFALR 334 (354)
T ss_dssp TTEEEE
T ss_pred cCcEEE
Confidence 555543
No 23
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.56 E-value=1.9e-15 Score=157.27 Aligned_cols=166 Identities=13% Similarity=0.114 Sum_probs=121.8
Q ss_pred CCcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-
Q 010971 151 ATPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT- 229 (496)
Q Consensus 151 ~~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~- 229 (496)
....+++|+|..|.....+...++ .+|.+|||+|||+|+.++++|.. +...|+++|+|+..++.+++|++.+|+.
T Consensus 187 ~~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~ 262 (385)
T 2b78_A 187 LNDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDM 262 (385)
T ss_dssp SSSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCC
T ss_pred ccccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 345667788866766655555544 57899999999999999998874 3358999999999999999999999997
Q ss_pred -eEEEEecCCCCCcccc--CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 010971 230 -NTIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 230 -nv~v~~~D~~~~~~~~--~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG 306 (496)
++.++++|+..+.... ....||+|++|||+.+.+- ..+......+.+++..+..+| +|||
T Consensus 263 ~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~-------------~~~~~~~~~~~~ll~~~~~~L----~pgG 325 (385)
T 2b78_A 263 ANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNK-------------KEVFSVSKDYHKLIRQGLEIL----SENG 325 (385)
T ss_dssp TTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC------------------CCCCHHHHHHHHHHHHHHTE----EEEE
T ss_pred cceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCCh-------------hhHHHHHHHHHHHHHHHHHhc----CCCc
Confidence 8999999987642211 1258999999999975320 011123345567888888887 9999
Q ss_pred EEEEEeCCCCC--cCCHHHHHHHHHhCCcEEee
Q 010971 307 YIVYSTCSIMV--TENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 307 ~LVYSTCSi~~--eENE~vV~~~L~~~~~~lv~ 337 (496)
+|++++|+-.. ++...++..++...+..++.
T Consensus 326 ~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 358 (385)
T 2b78_A 326 LIIASTNAANMTVSQFKKQIEKGFGKQKHTYLD 358 (385)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEE
Confidence 99999999765 33445666666666655443
No 24
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.56 E-value=3e-15 Score=142.19 Aligned_cols=121 Identities=12% Similarity=0.135 Sum_probs=94.9
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCcccc
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL 245 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~ 245 (496)
..+...++...++.+|||+|||+|..+.+++..+++.+.|+++|+++.++..+++++.+.|+.+ +.++.+|+......+
T Consensus 47 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 47 GKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3344444455678999999999999999999988756899999999999999999999999976 999999986542211
Q ss_pred C---CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 246 G---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 246 ~---~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
. ...||.|++|+++. ....++..+.++| +|||+|++.++.+.
T Consensus 127 ~~~~~~~fD~v~~d~~~~-------------------------~~~~~l~~~~~~L----~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 127 ENEKYEPFDFIFIDADKQ-------------------------NNPAYFEWALKLS----RPGTVIIGDNVVRE 171 (223)
T ss_dssp HHTTCCCCSEEEECSCGG-------------------------GHHHHHHHHHHTC----CTTCEEEEESCSGG
T ss_pred HhcCCCCcCEEEEcCCcH-------------------------HHHHHHHHHHHhc----CCCcEEEEeCCCcC
Confidence 1 15699999998743 1134577777775 99999998877654
No 25
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.54 E-value=9e-16 Score=160.42 Aligned_cols=196 Identities=14% Similarity=0.100 Sum_probs=125.8
Q ss_pred ccccE-EEeCCcchhHHHh---cCC--CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC
Q 010971 156 MAGFY-MLQSASSFLPVMA---LAP--QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT 229 (496)
Q Consensus 156 ~~G~~-~iQd~sS~l~v~~---L~~--~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~ 229 (496)
..|+| ..|.....+.+.+ +.. ++|.+|||+|||+|++++.+|..+++.+.|+++|+++.+++.+++|++.+|+.
T Consensus 24 ~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~ 103 (392)
T 3axs_A 24 MPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP 103 (392)
T ss_dssp CCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC
Confidence 44555 3454444443222 222 57899999999999999999998765579999999999999999999999998
Q ss_pred e--EEEEecCCCCCcc-ccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 010971 230 N--TIVCNYDGNELPK-VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 230 n--v~v~~~D~~~~~~-~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG 306 (496)
+ +.+++.|+..+.. .. ...||+|++||+|+. ..+|..|+++| ++||
T Consensus 104 ~~~v~v~~~Da~~~l~~~~-~~~fD~V~lDP~g~~--------------------------~~~l~~a~~~L----k~gG 152 (392)
T 3axs_A 104 EDRYEIHGMEANFFLRKEW-GFGFDYVDLDPFGTP--------------------------VPFIESVALSM----KRGG 152 (392)
T ss_dssp GGGEEEECSCHHHHHHSCC-SSCEEEEEECCSSCC--------------------------HHHHHHHHHHE----EEEE
T ss_pred CceEEEEeCCHHHHHHHhh-CCCCcEEEECCCcCH--------------------------HHHHHHHHHHh----CCCC
Confidence 7 9999999876643 22 257999999997541 23678888886 9999
Q ss_pred EEEEEeCCCCCcCCHHHHHHHHHhCCcEEeecCCcCCCCCcccccccccCCCcCCeeEecCCCCCCCceEEEEEEecC
Q 010971 307 YIVYSTCSIMVTENEAVIDYALKKRDVKLVPCGLDFGRQGFVRFREHRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMS 384 (496)
Q Consensus 307 ~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~~~~~~~~~g~~~~~~~~f~~~~~~~~r~~P~~~~~dGFFvA~l~K~~ 384 (496)
++|+||+-...-....+...+++++.....+..... .+...+-..-........+.+.|...-..+||+-+|.|..
T Consensus 153 -ll~~t~t~~~~l~g~~~~~~~rkYg~~p~r~~~~~e-~~~r~~L~~~~~~a~~~~~~i~P~l~~~~~~y~Rv~vrv~ 228 (392)
T 3axs_A 153 -ILSLTATDTAPLSGTYPKTCMRRYMARPLRNEFKHE-VGIRILIKKVIELAAQYDIAMIPIFAYSHLHYFKLFFVKE 228 (392)
T ss_dssp -EEEEEECCHHHHTTSSHHHHHHHHSSBCCCSTTHHH-HHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred -EEEEEecchhhhccccHHHHHHHhCCcccccccccc-hhHHHHHHHHHHhcccCCCeEEeeEEEEeCcEEEEEEEEe
Confidence 789999765432222334455555544322211000 0000000000000001235667766666788888877653
No 26
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.54 E-value=2.9e-15 Score=153.23 Aligned_cols=157 Identities=14% Similarity=0.056 Sum_probs=114.1
Q ss_pred CcccccccEEEeCCcchhHHHhcC-CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe
Q 010971 152 TPEYMAGFYMLQSASSFLPVMALA-PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN 230 (496)
Q Consensus 152 ~~~~~~G~~~iQd~sS~l~v~~L~-~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n 230 (496)
+..+..|+|..|.....+....+. ..++.+|||+|||+|+.+++++.. + ..|+++|+|+..++.+++|+..+|+.+
T Consensus 126 ~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~ 202 (332)
T 2igt_A 126 TAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQ 202 (332)
T ss_dssp CSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTT
T ss_pred CccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 455667888888776655555553 456889999999999999998874 3 399999999999999999999999975
Q ss_pred --EEEEecCCCCCcccc--CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc
Q 010971 231 --TIVCNYDGNELPKVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG 306 (496)
Q Consensus 231 --v~v~~~D~~~~~~~~--~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG 306 (496)
+.+++.|+..+.... ....||+|++||||.+.+-.. ++ + .....+..+|..+.++| +|||
T Consensus 203 ~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~---~~-~--------~~~~~~~~ll~~~~~~L----kpgG 266 (332)
T 2igt_A 203 APIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHG---EV-W--------QLFDHLPLMLDICREIL----SPKA 266 (332)
T ss_dssp SCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTC---CE-E--------EHHHHHHHHHHHHHHTB----CTTC
T ss_pred cceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchH---HH-H--------HHHHHHHHHHHHHHHhc----CcCc
Confidence 899999987654221 136899999999997765110 00 1 12234567888888886 9999
Q ss_pred E-EEEEeCCCCCcCCHHHHHHHHH
Q 010971 307 Y-IVYSTCSIMVTENEAVIDYALK 329 (496)
Q Consensus 307 ~-LVYSTCSi~~eENE~vV~~~L~ 329 (496)
+ ++.++|+... +......++.
T Consensus 267 ~lli~~~~~~~~--~~~~~~~~l~ 288 (332)
T 2igt_A 267 LGLVLTAYSIRA--SFYSMHELMR 288 (332)
T ss_dssp CEEEEEECCTTS--CHHHHHHHHH
T ss_pred EEEEEECCCCCC--CHHHHHHHHH
Confidence 9 5566677543 3444444443
No 27
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.54 E-value=2.5e-14 Score=142.08 Aligned_cols=127 Identities=25% Similarity=0.278 Sum_probs=104.3
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
+++|.+|||+|||+|+.++++|.... ..|+|+|+|+..++.+++|++.+|+.+ +.++++|+..++. ...||+|+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~---~~~fD~Vi 197 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---CSCEEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc---cCCccEEE
Confidence 46799999999999999999998743 279999999999999999999999987 8899999988764 37899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC---CCcCCHHHHHHHHHhC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI---MVTENEAVIDYALKKR 331 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi---~~eENE~vV~~~L~~~ 331 (496)
+|+|++. ..++..+.++| +|||+|++++|+- ...+..+.+..++...
T Consensus 198 ~~~p~~~--------------------------~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 198 MGYVVRT--------------------------HEFIPKALSIA----KDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp ECCCSSG--------------------------GGGHHHHHHHE----EEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred ECCchhH--------------------------HHHHHHHHHHC----CCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 9999542 23567777876 9999999999983 3455666777777777
Q ss_pred CcEEee
Q 010971 332 DVKLVP 337 (496)
Q Consensus 332 ~~~lv~ 337 (496)
++.+..
T Consensus 248 G~~~~~ 253 (278)
T 2frn_A 248 GYDVEK 253 (278)
T ss_dssp TCEEEE
T ss_pred CCeeEE
Confidence 765543
No 28
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.52 E-value=1.1e-14 Score=139.68 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=102.9
Q ss_pred ccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEec
Q 010971 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNY 236 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~ 236 (496)
|..++|...+.+...++.+.++.+|||+|||+|..+.+++..++ .+.|+++|+++.+++.+++++.+.|+. ++.+...
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 112 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFG 112 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 44456666666767777777899999999999999999999885 479999999999999999999999996 5999999
Q ss_pred CCCCC-ccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 237 DGNEL-PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 237 D~~~~-~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|+... +.....+.||+|++|+||+ .+..+|..+.++| +|||+|+++++.+
T Consensus 113 d~~~~~~~~~~~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L----~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 113 DALQLGEKLELYPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMV----RPGGLILSDNVLF 163 (233)
T ss_dssp CGGGSHHHHTTSCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGE----EEEEEEEEETTTC
T ss_pred CHHHHHHhcccCCCccEEEECCCHH-------------------------HHHHHHHHHHHHc----CCCeEEEEEcCCc
Confidence 98775 3221136899999998864 1245677777776 9999999997654
Q ss_pred C
Q 010971 316 M 316 (496)
Q Consensus 316 ~ 316 (496)
.
T Consensus 164 ~ 164 (233)
T 2gpy_A 164 R 164 (233)
T ss_dssp -
T ss_pred C
Confidence 3
No 29
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.50 E-value=1.4e-13 Score=134.40 Aligned_cols=116 Identities=19% Similarity=0.251 Sum_probs=92.4
Q ss_pred chhHHHh------cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCC
Q 010971 167 SFLPVMA------LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE 240 (496)
Q Consensus 167 S~l~v~~------L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~ 240 (496)
|.|++.+ |.++||++|||+|||+|..+.++|...+++|.|+|+|+++.+++.+.+++.+. .|+..+..|...
T Consensus 60 sklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~ 137 (233)
T 4df3_A 60 SKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARF 137 (233)
T ss_dssp CHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTC
T ss_pred hHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccC
Confidence 5666555 35899999999999999999999999999999999999999999999888765 478888888876
Q ss_pred Cccc-cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 241 LPKV-LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 241 ~~~~-~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.... .....||.|++|.+... .....+.++.++| ||||+++.+.
T Consensus 138 p~~~~~~~~~vDvVf~d~~~~~------------------------~~~~~l~~~~r~L----KpGG~lvI~i 182 (233)
T 4df3_A 138 PEKYRHLVEGVDGLYADVAQPE------------------------QAAIVVRNARFFL----RDGGYMLMAI 182 (233)
T ss_dssp GGGGTTTCCCEEEEEECCCCTT------------------------HHHHHHHHHHHHE----EEEEEEEEEE
T ss_pred ccccccccceEEEEEEeccCCh------------------------hHHHHHHHHHHhc----cCCCEEEEEE
Confidence 4321 22368999999987431 1134577787876 9999999864
No 30
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.49 E-value=4.9e-14 Score=139.17 Aligned_cols=205 Identities=14% Similarity=0.141 Sum_probs=123.6
Q ss_pred HHHHcCCCCCeEEEEcCCCCCHHHHH-HHHHHcCCccCCCCcCCcccEEEecCCCCCCCCcccccccEEEeCCcchhHHH
Q 010971 94 LIESFEKPRPICLRTNTLKTRRRDLA-DVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVM 172 (496)
Q Consensus 94 ~lea~~~~~P~~iRvNtlk~~~~~l~-~~L~~~Gv~~~p~~~~~~~gl~v~~~~~~i~~~~~~~~G~~~iQd~sS~l~v~ 172 (496)
++.+++...|++.|+|+.+.+.+.+. +.|...++.. .+ ......+..+. +.+......+..+...+++..+.+.+.
T Consensus 28 i~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~g~~~g~-~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (275)
T 1yb2_A 28 ILVSEDEYGKFDESTNSILVKGKMHHLGISRVIEPGD-EL-IVSGKSFIVSD-FSPMYFGRVIRRNTQIISEIDASYIIM 104 (275)
T ss_dssp EEECSSCCEEEETTTTEEEC-CCEEECC-CCCCCTTC-EE-EETTEEEEEEC-CCGGGHHHHC-----------------
T ss_pred EEEecCCCCceeccccceeccCCccchhheeCCCCCc-EE-EECCeEEEEeC-CCHHHHHhhccccccccChhhHHHHHH
Confidence 34567788899999997665432211 1111111100 00 00001111211 111122233445566677766777778
Q ss_pred hcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-CCCeEEEEecCCCCCccccCCCCcC
Q 010971 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~-g~~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
.+.+.++.+|||+|||+|..+.+++..+.+.+.|+++|+++.+++.+++++.++ |..++.+...|+... +..+.||
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~---~~~~~fD 181 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF---ISDQMYD 181 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC---CCSCCEE
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc---CcCCCcc
Confidence 888999999999999999999999998655689999999999999999999999 988899999998763 2336899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKR 331 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~ 331 (496)
+|++|+| +| ..+|..+.+.| +|||+|++++|+.. ....+...+...
T Consensus 182 ~Vi~~~~---------~~------------------~~~l~~~~~~L----kpgG~l~i~~~~~~---~~~~~~~~l~~~ 227 (275)
T 1yb2_A 182 AVIADIP---------DP------------------WNHVQKIASMM----KPGSVATFYLPNFD---QSEKTVLSLSAS 227 (275)
T ss_dssp EEEECCS---------CG------------------GGSHHHHHHTE----EEEEEEEEEESSHH---HHHHHHHHSGGG
T ss_pred EEEEcCc---------CH------------------HHHHHHHHHHc----CCCCEEEEEeCCHH---HHHHHHHHHHHC
Confidence 9999887 11 13577777776 99999999998762 222333345555
Q ss_pred CcEEeec
Q 010971 332 DVKLVPC 338 (496)
Q Consensus 332 ~~~lv~~ 338 (496)
++..+.+
T Consensus 228 Gf~~~~~ 234 (275)
T 1yb2_A 228 GMHHLET 234 (275)
T ss_dssp TEEEEEE
T ss_pred CCeEEEE
Confidence 6665544
No 31
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.49 E-value=8.8e-14 Score=143.75 Aligned_cols=102 Identities=17% Similarity=0.263 Sum_probs=84.0
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCC-----------
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL----------- 247 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~----------- 247 (496)
|.+|||+|||+|+.|+.+|.. .+.|+|+|+++..++.+++|++.+|+.|+.++.+|+..+...+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 688999999999999988863 368999999999999999999999999999999998765322211
Q ss_pred ---CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 248 ---NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 248 ---~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
..||+|++|||+.|. ...+++.+ ++||+|||++|+.
T Consensus 291 ~~~~~fD~Vv~dPPr~g~----------------------------~~~~~~~l----~~~g~ivyvsc~p 329 (369)
T 3bt7_A 291 LKSYQCETIFVDPPRSGL----------------------------DSETEKMV----QAYPRILYISCNP 329 (369)
T ss_dssp GGGCCEEEEEECCCTTCC----------------------------CHHHHHHH----TTSSEEEEEESCH
T ss_pred cccCCCCEEEECcCcccc----------------------------HHHHHHHH----hCCCEEEEEECCH
Confidence 279999999998753 23345555 7899999999974
No 32
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.49 E-value=3.6e-13 Score=126.24 Aligned_cols=140 Identities=19% Similarity=0.192 Sum_probs=109.4
Q ss_pred ccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecC
Q 010971 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D 237 (496)
|.+ .++....+....+.+.++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++|+.++|+.++.++..|
T Consensus 21 g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 98 (204)
T 3e05_A 21 KLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF 98 (204)
T ss_dssp TTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC
T ss_pred CcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 444 3333334455667888999999999999999999998853 57999999999999999999999999889999999
Q ss_pred CCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 238 ~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
+....... ..||+|+++.+.. ....+|..+.++| +|||+|++++++.
T Consensus 99 ~~~~~~~~--~~~D~i~~~~~~~-------------------------~~~~~l~~~~~~L----kpgG~l~~~~~~~-- 145 (204)
T 3e05_A 99 APEGLDDL--PDPDRVFIGGSGG-------------------------MLEEIIDAVDRRL----KSEGVIVLNAVTL-- 145 (204)
T ss_dssp TTTTCTTS--CCCSEEEESCCTT-------------------------CHHHHHHHHHHHC----CTTCEEEEEECBH--
T ss_pred hhhhhhcC--CCCCEEEECCCCc-------------------------CHHHHHHHHHHhc----CCCeEEEEEeccc--
Confidence 86554322 6799999987631 1135677888876 9999999988775
Q ss_pred cCCHHHHHHHHHhCCc
Q 010971 318 TENEAVIDYALKKRDV 333 (496)
Q Consensus 318 eENE~vV~~~L~~~~~ 333 (496)
++...+..++.+.++
T Consensus 146 -~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 146 -DTLTKAVEFLEDHGY 160 (204)
T ss_dssp -HHHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHCCC
Confidence 455666667777775
No 33
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.49 E-value=2.5e-13 Score=128.72 Aligned_cols=131 Identities=19% Similarity=0.242 Sum_probs=105.7
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~ 247 (496)
+....+.+.++.+|||+|||+|..+..++.. .+.|+++|+++.+++.+++|++++|+. ++.++.+|+.......
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-- 120 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-- 120 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS--
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC--
Confidence 4455678889999999999999999999887 479999999999999999999999998 8999999998743222
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHH
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~ 327 (496)
..||.|++++.. . +. ++..+.+.| +|||+|++++|+. ++...+..+
T Consensus 121 ~~~D~v~~~~~~----------------~----------~~-~l~~~~~~L----kpgG~lv~~~~~~---~~~~~~~~~ 166 (204)
T 3njr_A 121 PLPEAVFIGGGG----------------S----------QA-LYDRLWEWL----APGTRIVANAVTL---ESETLLTQL 166 (204)
T ss_dssp CCCSEEEECSCC----------------C----------HH-HHHHHHHHS----CTTCEEEEEECSH---HHHHHHHHH
T ss_pred CCCCEEEECCcc----------------c----------HH-HHHHHHHhc----CCCcEEEEEecCc---ccHHHHHHH
Confidence 579999987621 0 12 577777776 9999999999875 566666677
Q ss_pred HHhCCcEEeec
Q 010971 328 LKKRDVKLVPC 338 (496)
Q Consensus 328 L~~~~~~lv~~ 338 (496)
++..++++..+
T Consensus 167 l~~~g~~i~~i 177 (204)
T 3njr_A 167 HARHGGQLLRI 177 (204)
T ss_dssp HHHHCSEEEEE
T ss_pred HHhCCCcEEEE
Confidence 77777776665
No 34
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.48 E-value=1.3e-14 Score=145.07 Aligned_cols=222 Identities=15% Similarity=0.152 Sum_probs=133.2
Q ss_pred HHHHHHHHhC--CHHHHHHHHHHcCCCCCeEEEEcC---CCCCHHHHHHHHHH--cCCccCCCCcC-CcccEEEecCCCC
Q 010971 77 FLIGALVEMF--PPVELMELIESFEKPRPICLRTNT---LKTRRRDLADVLIN--RGVNLDPLSKW-SKVGLVVYDSQVP 148 (496)
Q Consensus 77 wl~~~l~~~~--~~~e~~~~lea~~~~~P~~iRvNt---lk~~~~~l~~~L~~--~Gv~~~p~~~~-~~~gl~v~~~~~~ 148 (496)
|....|...+ +..++..++.......+.++++|. ...+.+.+.+.+.. .|..+..+..+ .-.|+.+.
T Consensus 22 ~~~~~l~~~~~~~~~~a~~ll~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~~~~p~~yi~g~~~f~~~~~~----- 96 (284)
T 1nv8_A 22 DCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFL----- 96 (284)
T ss_dssp HHHHHTTTTCSCHHHHHHHHHHHHHTCCGGGGCCSSCCCCHHHHHHHHHHHHHHHTTCCHHHHHTEEEETTEEEE-----
T ss_pred HHHHHHHhccCChHHHHHHHHHHHcCCCHHHHHhccccccccCHHHHHHHHHHHHCCCCCeEEeeeeEECCeEEE-----
Confidence 4444444333 445677777777666777777765 22222445444443 34322211000 00112111
Q ss_pred CCCCcccccccEEEeCCcchhHHHhc---CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH
Q 010971 149 IGATPEYMAGFYMLQSASSFLPVMAL---APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR 225 (496)
Q Consensus 149 i~~~~~~~~G~~~iQd~sS~l~v~~L---~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r 225 (496)
...|.|+.......++-.++ ...++.+|||+|||+|..++.++.. +...|+|+|+|+..++.+++|+.+
T Consensus 97 ------v~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~ 168 (284)
T 1nv8_A 97 ------VEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAER 168 (284)
T ss_dssp ------CCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHH
T ss_pred ------eCCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH
Confidence 01233333333333333332 2346789999999999999999988 457999999999999999999999
Q ss_pred cCCCe-EEEEecCCCCCccccCCCCc---CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHH-Hhhhh
Q 010971 226 MGVTN-TIVCNYDGNELPKVLGLNTV---DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI-DMVDA 300 (496)
Q Consensus 226 ~g~~n-v~v~~~D~~~~~~~~~~~~f---D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~-~~l~~ 300 (496)
+|+.+ +.+++.|+..... +.| |+|++||||.+.+. .-.+++++. ....+. .......++..++ +.+
T Consensus 169 ~~l~~~v~~~~~D~~~~~~----~~f~~~D~IvsnPPyi~~~~-~l~~~v~~e-p~~al~-~~~dgl~~~~~i~~~~l-- 239 (284)
T 1nv8_A 169 HGVSDRFFVRKGEFLEPFK----EKFASIEMILSNPPYVKSSA-HLPKDVLFE-PPEALF-GGEDGLDFYREFFGRYD-- 239 (284)
T ss_dssp TTCTTSEEEEESSTTGGGG----GGTTTCCEEEECCCCBCGGG-SCTTSCCCS-CHHHHB-CTTTSCHHHHHHHHHCC--
T ss_pred cCCCCceEEEECcchhhcc----cccCCCCEEEEcCCCCCccc-ccChhhccC-cHHHhc-CCCcHHHHHHHHHHhcC--
Confidence 99986 9999999876321 468 99999999998876 444555411 111000 0000113566666 665
Q ss_pred cCCCCcEEEEEeCCCCCcCCHHHHH
Q 010971 301 NSKSGGYIVYSTCSIMVTENEAVID 325 (496)
Q Consensus 301 ~lkpGG~LVYSTCSi~~eENE~vV~ 325 (496)
+|||.|++. +...+.++|.+
T Consensus 240 --~pgG~l~~e---~~~~q~~~v~~ 259 (284)
T 1nv8_A 240 --TSGKIVLME---IGEDQVEELKK 259 (284)
T ss_dssp --CTTCEEEEE---CCTTCHHHHTT
T ss_pred --CCCCEEEEE---ECchHHHHHHH
Confidence 999999863 34445555443
No 35
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.48 E-value=1.8e-13 Score=136.93 Aligned_cols=125 Identities=26% Similarity=0.313 Sum_probs=100.1
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
.++|++|||||||+|+.|+++|.. +...|+|+|+|+..++.+++|++.+|+.+ +.++++|++.++. .+.||+|+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~---~~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG---ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC---CSCEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc---ccCCCEEE
Confidence 478999999999999999998875 34689999999999999999999999976 8999999998864 36899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE-eC--CCCCcCCHHHHHHHHHhC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS-TC--SIMVTENEAVIDYALKKR 331 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS-TC--Si~~eENE~vV~~~L~~~ 331 (496)
+|+|++.. +.|..|+.++ ++||.|.|. .+ .....+..+.+..+....
T Consensus 198 ~~~p~~~~--------------------------~~l~~a~~~l----k~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 198 MGYVVRTH--------------------------EFIPKALSIA----KDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp ECCCSSGG--------------------------GGHHHHHHHE----EEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred ECCCCcHH--------------------------HHHHHHHHHc----CCCCEEEEEeeecccccchhHHHHHHHHHHHc
Confidence 99997542 2467788876 999998653 32 233455567777777776
Q ss_pred CcEE
Q 010971 332 DVKL 335 (496)
Q Consensus 332 ~~~l 335 (496)
++++
T Consensus 248 g~~v 251 (278)
T 3k6r_A 248 GYDV 251 (278)
T ss_dssp TCEE
T ss_pred CCcE
Confidence 6544
No 36
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.48 E-value=1.7e-13 Score=126.14 Aligned_cols=123 Identities=15% Similarity=0.205 Sum_probs=89.8
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
.+.+|.+|||+|||+|..|.+++.. .+.|+|+|+|+.+++.+++++...|+.++.+++.|...++... .+.||.|+
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~-~~~fD~v~ 94 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYV-REPIRAAI 94 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTC-CSCEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhc-cCCcCEEE
Confidence 3568999999999999999999876 4799999999999999999999999988999887776654333 47899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e 318 (496)
+++++-.. ....+......+..+|..+.+.| +|||+|+.+.++-++.
T Consensus 95 ~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~ 141 (185)
T 3mti_A 95 FNLGYLPS-------------ADKSVITKPHTTLEAIEKILDRL----EVGGRLAIMIYYGHDG 141 (185)
T ss_dssp EEEC------------------------CHHHHHHHHHHHHHHE----EEEEEEEEEEC-----
T ss_pred EeCCCCCC-------------cchhcccChhhHHHHHHHHHHhc----CCCcEEEEEEeCCCCC
Confidence 98643111 11122223344566788888876 9999999888875543
No 37
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.47 E-value=1.6e-13 Score=130.59 Aligned_cols=150 Identities=13% Similarity=0.068 Sum_probs=102.7
Q ss_pred CCCCCCeEeeccCC-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAA-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAg-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+.+|.+|||+||| +|..+..++... .+.|+++|+++..++.+++|+..+|+ ++.++..|+..+... ..+.||+|
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~-~~~~fD~I 127 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGV-VEGTFDVI 127 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTT-CCSCEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhc-ccCceeEE
Confidence 35689999999999 999999999886 47999999999999999999999999 899999997654332 23789999
Q ss_pred EECCCCCCCCcccCC-chhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCC
Q 010971 254 LLDAPCSGTGVISKD-ESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRD 332 (496)
Q Consensus 254 LlDaPCSg~G~i~r~-p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~ 332 (496)
++|||+...+..... |...+......+ .....+|..+.++| +|||+|++.+++- .+....+...+.+.+
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~L----kpgG~l~~~~~~~--~~~~~~~~~~l~~~g 197 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGE----EFSVKLLEEAFDHL----NPGGKVALYLPDK--EKLLNVIKERGIKLG 197 (230)
T ss_dssp EECCCCC---------------CCSSSC----HHHHHHHHHHGGGE----EEEEEEEEEEESC--HHHHHHHHHHHHHTT
T ss_pred EECCCCcCCccccccChhhhhccCccch----HHHHHHHHHHHHHh----CCCeEEEEEeccc--HhHHHHHHHHHHHcC
Confidence 999998766542211 111110000011 11255777777776 9999999876542 133445556667777
Q ss_pred cEEeec
Q 010971 333 VKLVPC 338 (496)
Q Consensus 333 ~~lv~~ 338 (496)
+.+..+
T Consensus 198 ~~~~~~ 203 (230)
T 3evz_A 198 YSVKDI 203 (230)
T ss_dssp CEEEEE
T ss_pred CceEEE
Confidence 765544
No 38
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.46 E-value=1e-13 Score=134.37 Aligned_cols=121 Identities=17% Similarity=0.126 Sum_probs=96.0
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCcccc
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL 245 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~ 245 (496)
..+...++...++.+|||+|||+|..+++++..+++.+.|+++|+++.+++.+++++.+.|+.+ +.+..+|+..+...+
T Consensus 59 ~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 59 GQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNL 138 (237)
T ss_dssp HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 3344444444567899999999999999999998767899999999999999999999999974 999999987642212
Q ss_pred -----CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 246 -----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 246 -----~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
..+.||.|++|++|. .+..++..+.++| +|||+||+.+|.+.
T Consensus 139 ~~~~~~~~~fD~I~~d~~~~-------------------------~~~~~l~~~~~~L----~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVDADKP-------------------------NYIKYHERLMKLV----KVGGIVAYDNTLWG 185 (237)
T ss_dssp HHSTTCTTCEEEEEECSCGG-------------------------GHHHHHHHHHHHE----EEEEEEEEECTTGG
T ss_pred HhccCCCCCcCEEEECCchH-------------------------HHHHHHHHHHHhc----CCCeEEEEecCCcC
Confidence 136899999998642 1244677777776 99999999988653
No 39
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.46 E-value=3.9e-13 Score=124.95 Aligned_cols=126 Identities=17% Similarity=0.267 Sum_probs=97.8
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+++|.+|||+|||+|..+..++..+++.+.|+++|+++.+++.+++++..+|+ .++.+++.|+..++... .+.||+|
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~fD~v 97 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI-DCPVKAV 97 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC-CSCEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc-cCCceEE
Confidence 467899999999999999999999986667999999999999999999999998 67999999988776433 3789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e 318 (496)
++|+|.-..+ +........ ....+|..+.++| +|||+|++++++-.+.
T Consensus 98 ~~~~~~~~~~------~~~~~~~~~-------~~~~~l~~~~~~L----k~gG~l~~~~~~~~~~ 145 (197)
T 3eey_A 98 MFNLGYLPSG------DHSISTRPE-------TTIQALSKAMELL----VTGGIITVVIYYGGDT 145 (197)
T ss_dssp EEEESBCTTS------CTTCBCCHH-------HHHHHHHHHHHHE----EEEEEEEEEECCBTTT
T ss_pred EEcCCcccCc------ccccccCcc-------cHHHHHHHHHHhC----cCCCEEEEEEccCCCC
Confidence 9998751111 000111111 2344788888886 9999999988665443
No 40
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.46 E-value=6.3e-13 Score=137.42 Aligned_cols=153 Identities=12% Similarity=0.123 Sum_probs=114.4
Q ss_pred cccccccEEEeCCcchhHHHhc-CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeE
Q 010971 153 PEYMAGFYMLQSASSFLPVMAL-APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 153 ~~~~~G~~~iQd~sS~l~v~~L-~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv 231 (496)
..|..++...|+..+.+..... ...+|.+|||+| |+|..+..++.. ...+.|+++|+++.+++.+++|+.++|+.++
T Consensus 146 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v 223 (373)
T 2qm3_A 146 HEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDI 223 (373)
T ss_dssp GGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCE
T ss_pred hhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCE
Confidence 3455566666665555543322 345789999999 999999988775 3347999999999999999999999999889
Q ss_pred EEEecCCCC-CccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc-EEE
Q 010971 232 IVCNYDGNE-LPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG-YIV 309 (496)
Q Consensus 232 ~v~~~D~~~-~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG-~LV 309 (496)
.++.+|+.. ++... .+.||+|++|+||+.. . ...+|..+.+.| +||| .++
T Consensus 224 ~~~~~D~~~~l~~~~-~~~fD~Vi~~~p~~~~----------------~-------~~~~l~~~~~~L----kpgG~~~~ 275 (373)
T 2qm3_A 224 EIFTFDLRKPLPDYA-LHKFDTFITDPPETLE----------------A-------IRAFVGRGIATL----KGPRCAGY 275 (373)
T ss_dssp EEECCCTTSCCCTTT-SSCBSEEEECCCSSHH----------------H-------HHHHHHHHHHTB----CSTTCEEE
T ss_pred EEEEChhhhhchhhc-cCCccEEEECCCCchH----------------H-------HHHHHHHHHHHc----ccCCeEEE
Confidence 999999988 55322 2589999999997531 0 156788888886 9999 558
Q ss_pred EEeCCCCCcCCH---HHHHHHHH-hCCcEEee
Q 010971 310 YSTCSIMVTENE---AVIDYALK-KRDVKLVP 337 (496)
Q Consensus 310 YSTCSi~~eENE---~vV~~~L~-~~~~~lv~ 337 (496)
|++|+ ..++. ..+..++. ..++.+..
T Consensus 276 ~~~~~--~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 276 FGITR--RESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp EEECT--TTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred EEEec--CcCCHHHHHHHHHHHHHhcCcchhh
Confidence 88887 34555 56677776 66765544
No 41
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.44 E-value=2.9e-14 Score=139.01 Aligned_cols=127 Identities=11% Similarity=0.115 Sum_probs=99.0
Q ss_pred EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCC
Q 010971 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDG 238 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~ 238 (496)
+.++.....+...++...++.+|||+|||+|..|++||..++..+.|+++|+++..++.+++++.+.|+. ++.++.+|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 3344555555555555667889999999999999999999876789999999999999999999999996 699999998
Q ss_pred CCCcccc----CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 239 NELPKVL----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 239 ~~~~~~~----~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
..+...+ ..+.||+|++|+++. ....+|..+.++| +|||+||+..+.
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpGG~lv~d~~~ 172 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADKT-------------------------NYLNYYELALKLV----TPKGLIAIDNIF 172 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCGG-------------------------GHHHHHHHHHHHE----EEEEEEEEECSS
T ss_pred HHHHHHHhhccCCCCEeEEEEcCChH-------------------------HhHHHHHHHHHhc----CCCeEEEEECCc
Confidence 7653221 026899999998621 0123577777776 999999987666
Q ss_pred C
Q 010971 315 I 315 (496)
Q Consensus 315 i 315 (496)
+
T Consensus 173 ~ 173 (242)
T 3r3h_A 173 W 173 (242)
T ss_dssp S
T ss_pred c
Confidence 4
No 42
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=1.3e-12 Score=128.31 Aligned_cols=137 Identities=17% Similarity=0.166 Sum_probs=96.7
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH---cCCC-eEEEEecCCCCCc
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR---MGVT-NTIVCNYDGNELP 242 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r---~g~~-nv~v~~~D~~~~~ 242 (496)
+.+.+..+.+.++.+|||+|||+|..++.+++..+ ...|+++|+++..++.+++|+.. +|+. ++.+++.|+..+.
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRA 103 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCH
T ss_pred HHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHh
Confidence 56667777788899999999999999999999874 37999999999999999999999 8887 4999999998872
Q ss_pred c-----ccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 243 K-----VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 243 ~-----~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
. .+..+.||+|++|||+...+ -...|+....... .........+|..+.++| +|||+|++..
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a~---~~~~~~~~~~l~~~~~~L----kpgG~l~~~~ 170 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNPPYNDAG-DRRTPDALKAEAH---AMTEGLFEDWIRTASAIM----VSGGQLSLIS 170 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECCCC-------------------------CCHHHHHHHHHHHE----EEEEEEEEEE
T ss_pred hhhhhhccCCCCcCEEEECCCCcCCC-CCCCcCHHHHHHh---hcCcCCHHHHHHHHHHHc----CCCCEEEEEE
Confidence 1 13347899999999998764 1222222111100 000111356788888886 9999998753
No 43
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.42 E-value=4e-14 Score=131.92 Aligned_cols=144 Identities=15% Similarity=0.087 Sum_probs=74.9
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc--cCCCCcCEEE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--LGLNTVDRVL 254 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~--~~~~~fD~VL 254 (496)
.++.+|||+|||+|..+.+++...+ .+.|+++|+++..++.++.|+..+|. ++.+++.|+...... ...+.||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC--------------------CCHHHHHHHHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhhccCcccEEE
Confidence 6889999999999999999999864 46999999999999999999999988 888888887652111 0127899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHH-H---HHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHH
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLED-I---QKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALK 329 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~-i---~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~ 329 (496)
+|||+...+.+..-+.......+.. + .........++..+.++ |+|||++++.++.. .....+..++.
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----LkpgG~l~~~~~~~---~~~~~~~~~l~ 178 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYV----LARGRAGVFLEVGH---NQADEVARLFA 178 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGG----BCSSSEEEEEECTT---SCHHHHHHHTG
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHH----hcCCCeEEEEEECC---ccHHHHHHHHH
Confidence 9999987765543211110000000 0 00011124455555555 59999966655553 44555555565
No 44
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.40 E-value=4.8e-12 Score=124.69 Aligned_cols=133 Identities=20% Similarity=0.249 Sum_probs=103.7
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~ 247 (496)
..+..+++.+|.+|||+|||+|..+..++..+++.+.|+++|+++.+++.+++|+..+|+ .++.+...|+... +..
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~ 179 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDE 179 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSC
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccC
Confidence 345566788999999999999999999999876568999999999999999999999998 5799999998765 233
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHH
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~ 327 (496)
+.||+|++|+|+. ..+|..+.++| +|||.|++.+++.. .-+.+ ...
T Consensus 180 ~~~D~V~~~~~~~---------------------------~~~l~~~~~~L----~pgG~l~~~~~~~~--~~~~~-~~~ 225 (277)
T 1o54_A 180 KDVDALFLDVPDP---------------------------WNYIDKCWEAL----KGGGRFATVCPTTN--QVQET-LKK 225 (277)
T ss_dssp CSEEEEEECCSCG---------------------------GGTHHHHHHHE----EEEEEEEEEESSHH--HHHHH-HHH
T ss_pred CccCEEEECCcCH---------------------------HHHHHHHHHHc----CCCCEEEEEeCCHH--HHHHH-HHH
Confidence 6799999998842 13577777776 99999999887652 11233 344
Q ss_pred HHhCCcEEeec
Q 010971 328 LKKRDVKLVPC 338 (496)
Q Consensus 328 L~~~~~~lv~~ 338 (496)
|...++..+.+
T Consensus 226 l~~~gf~~~~~ 236 (277)
T 1o54_A 226 LQELPFIRIEV 236 (277)
T ss_dssp HHHSSEEEEEE
T ss_pred HHHCCCceeEE
Confidence 55567665554
No 45
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.40 E-value=1.7e-12 Score=120.36 Aligned_cols=113 Identities=14% Similarity=0.103 Sum_probs=89.2
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.+|.+|||+|||+|..+..++.. +...|+++|+|+..++.+++|+..+|+.++.+++.|+..++..+..+.||+|++|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~ 120 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLAD 120 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEEC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEEC
Confidence 57899999999999999987763 4468999999999999999999999998899999999876543334789999999
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHH--hhhhcCCCCcEEEEEeCCCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID--MVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~--~l~~~lkpGG~LVYSTCSi~ 316 (496)
+|.... . .....++..+.+ + |+|||+|++.+.+-.
T Consensus 121 ~p~~~~--------------~-------~~~~~~l~~~~~~~~----L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 121 PPYNVD--------------S-------ADVDAILAALGTNGW----TREGTVAVVERATTC 157 (189)
T ss_dssp CCTTSC--------------H-------HHHHHHHHHHHHSSS----CCTTCEEEEEEETTS
T ss_pred CCCCcc--------------h-------hhHHHHHHHHHhcCc----cCCCeEEEEEecCCC
Confidence 994321 1 112344555555 5 499999999877643
No 46
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.39 E-value=5.8e-13 Score=131.95 Aligned_cols=109 Identities=25% Similarity=0.322 Sum_probs=89.8
Q ss_pred hcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCE
Q 010971 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
+..+.+|++|||+|||+|..|+.+|...+ .+.|+|+|+++..++.+++|++.+|+.|+.++++|+..++ . ...||+
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~--~~~~D~ 189 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-L--KDVADR 189 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-C--TTCEEE
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-c--cCCceE
Confidence 34467899999999999999999998864 4799999999999999999999999999999999998773 2 368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|++|+|. + ..+++..+++.| +|||+|++ +|...
T Consensus 190 Vi~d~p~---~-----------------------~~~~l~~~~~~L----kpgG~l~~-s~~~~ 222 (272)
T 3a27_A 190 VIMGYVH---K-----------------------THKFLDKTFEFL----KDRGVIHY-HETVA 222 (272)
T ss_dssp EEECCCS---S-----------------------GGGGHHHHHHHE----EEEEEEEE-EEEEE
T ss_pred EEECCcc---c-----------------------HHHHHHHHHHHc----CCCCEEEE-EEcCc
Confidence 9999994 1 123577777776 99998774 55544
No 47
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.38 E-value=1.3e-12 Score=125.60 Aligned_cols=113 Identities=14% Similarity=0.133 Sum_probs=92.9
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC--eEEEEecCCCCCccccCCCCcC
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~--nv~v~~~D~~~~~~~~~~~~fD 251 (496)
..++++.+|||+|||+|..|+.|+..+++.+.|+++|+++.+++.+++++.+.|+. ++.++.+|+..+...+..+.||
T Consensus 52 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD 131 (221)
T 3dr5_A 52 TNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQ 131 (221)
T ss_dssp SCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEE
T ss_pred hCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcC
Confidence 44556679999999999999999998876789999999999999999999999997 6999999987654333347899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.|++|++... ...++..+.++| +|||+||+.++.+
T Consensus 132 ~V~~d~~~~~-------------------------~~~~l~~~~~~L----kpGG~lv~dn~~~ 166 (221)
T 3dr5_A 132 LVFGQVSPMD-------------------------LKALVDAAWPLL----RRGGALVLADALL 166 (221)
T ss_dssp EEEECCCTTT-------------------------HHHHHHHHHHHE----EEEEEEEETTTTG
T ss_pred eEEEcCcHHH-------------------------HHHHHHHHHHHc----CCCcEEEEeCCCC
Confidence 9999986211 123577777776 9999999988776
No 48
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.37 E-value=7e-13 Score=124.76 Aligned_cols=123 Identities=18% Similarity=0.261 Sum_probs=90.4
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc------cC---
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------LG--- 246 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~------~~--- 246 (496)
+++|.+|||+|||||++|.++++. .+.|+|+|+++. ..+.++.++.+|+...+.. +.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~-----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEM-----------EEIAGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCC-----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEecccc-----------ccCCCeEEEEccccCHHHHHHHHHHhhccc
Confidence 468999999999999999999887 589999999974 2346788999999875321 11
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~ 326 (496)
.+.||+|++|+|+..+|... .+......++..+|..|.++| +|||.||..+ +..++...+..
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~-----------~d~~~~~~l~~~~l~~a~~~L----kpGG~lv~k~---~~~~~~~~~~~ 150 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPS-----------RDHAVSYQIGQRVMEIAVRYL----RNGGNVLLKQ---FQGDMTNDFIA 150 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHH-----------HHHHHHHHHHHHHHHHHHHHE----EEEEEEEEEE---ECSTHHHHHHH
T ss_pred CCcceEEecCCCcCCCCCcc-----------cCHHHHHHHHHHHHHHHHHHc----cCCCEEEEEE---cCCCCHHHHHH
Confidence 13899999999988877521 222334456677888888876 9999998544 44555555666
Q ss_pred HHHh
Q 010971 327 ALKK 330 (496)
Q Consensus 327 ~L~~ 330 (496)
.++.
T Consensus 151 ~l~~ 154 (191)
T 3dou_A 151 IWRK 154 (191)
T ss_dssp HHGG
T ss_pred HHHH
Confidence 6654
No 49
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.37 E-value=1.3e-11 Score=130.34 Aligned_cols=87 Identities=23% Similarity=0.211 Sum_probs=74.7
Q ss_pred hcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc--cCCCCc
Q 010971 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--LGLNTV 250 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~--~~~~~f 250 (496)
.+.+.++.+|||+|||+|..++.||.. .+.|+|+|+++..++.++.|+..+|+.|+.+..+|+...... +..+.|
T Consensus 281 ~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~f 357 (433)
T 1uwv_A 281 WLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGF 357 (433)
T ss_dssp HHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCC
T ss_pred hhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCC
Confidence 456778899999999999999999876 478999999999999999999999999999999999773211 223689
Q ss_pred CEEEECCCCCCC
Q 010971 251 DRVLLDAPCSGT 262 (496)
Q Consensus 251 D~VLlDaPCSg~ 262 (496)
|+|++|||+.|.
T Consensus 358 D~Vv~dPPr~g~ 369 (433)
T 1uwv_A 358 DKVLLDPARAGA 369 (433)
T ss_dssp SEEEECCCTTCC
T ss_pred CEEEECCCCccH
Confidence 999999998765
No 50
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.37 E-value=8.8e-12 Score=118.84 Aligned_cols=131 Identities=25% Similarity=0.286 Sum_probs=92.7
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc--ccCCCCcC
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK--VLGLNTVD 251 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~--~~~~~~fD 251 (496)
+.+.+|.+|||+|||+|..+.+++...+ .|.|+|+|+|+.+++.+.+++++. .|+.++..|+..... .+ .+.||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~-~~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGI-VEKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTT-CCCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhccc-cccee
Confidence 3467899999999999999999999987 689999999999998888777654 478888889876421 12 26899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHH-HHHHHHHHhhhhcCCCCcEEEEEe---CCCCCcCCHHHHH-H
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQK-QLILAAIDMVDANSKSGGYIVYST---CSIMVTENEAVID-Y 326 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~-~LL~~A~~~l~~~lkpGG~LVYST---CSi~~eENE~vV~-~ 326 (496)
.|++|.+ +| .|. .+|.++.++| ||||+|+++. |.-.....+++.. .
T Consensus 129 ~V~~~~~---------~~----------------~~~~~~l~~~~r~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~ 179 (210)
T 1nt2_A 129 LIYQDIA---------QK----------------NQIEILKANAEFFL----KEKGEVVIMVKARSIDSTAEPEEVFKSV 179 (210)
T ss_dssp EEEECCC---------ST----------------THHHHHHHHHHHHE----EEEEEEEEEEEHHHHCTTSCHHHHHHHH
T ss_pred EEEEecc---------Ch----------------hHHHHHHHHHHHHh----CCCCEEEEEEecCCccccCCHHHHHHHH
Confidence 9999842 11 112 2467777776 9999999984 2222233444432 2
Q ss_pred H--HHhCCcEEeec
Q 010971 327 A--LKKRDVKLVPC 338 (496)
Q Consensus 327 ~--L~~~~~~lv~~ 338 (496)
+ |+.. ++++..
T Consensus 180 ~~~l~~~-f~~~~~ 192 (210)
T 1nt2_A 180 LKEMEGD-FKIVKH 192 (210)
T ss_dssp HHHHHTT-SEEEEE
T ss_pred HHHHHhh-cEEeee
Confidence 1 5665 776653
No 51
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.37 E-value=1.6e-12 Score=132.77 Aligned_cols=108 Identities=25% Similarity=0.304 Sum_probs=91.6
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
.+|.+|||+|||+|+.+++ |. +.+.|+|+|+|+..++.+++|++.+|+ .++.++++|+..+. ..||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-----~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-----VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-----CCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-----CCCcEEEE
Confidence 5799999999999999998 65 357999999999999999999999999 47999999998764 67999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~ 326 (496)
|||.++. .++..+++++ +|||.|+|++|+-. .+...+.
T Consensus 265 dpP~~~~--------------------------~~l~~~~~~L----~~gG~l~~~~~~~~---~~~~~~~ 302 (336)
T 2yx1_A 265 NLPKFAH--------------------------KFIDKALDIV----EEGGVIHYYTIGKD---FDKAIKL 302 (336)
T ss_dssp CCTTTGG--------------------------GGHHHHHHHE----EEEEEEEEEEEESS---SHHHHHH
T ss_pred CCcHhHH--------------------------HHHHHHHHHc----CCCCEEEEEEeecC---chHHHHH
Confidence 9996532 4677788876 99999999999987 4444443
No 52
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.37 E-value=2.8e-12 Score=116.46 Aligned_cols=133 Identities=17% Similarity=0.211 Sum_probs=101.7
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCC-CccccC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNE-LPKVLG 246 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~-~~~~~~ 246 (496)
.....+.+.++.+|||+|||+|..+.+++...+ .+.|+++|+++.+++.+++++..+|+. ++ ++..|+.. ++. .
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~--~ 91 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD--V 91 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG--C
T ss_pred HHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc--c
Confidence 334556788999999999999999999988764 479999999999999999999999998 78 77888754 222 1
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~ 326 (496)
.+.||+|+++.+... ..++..+.++| +|||+|++++++. ++...+..
T Consensus 92 ~~~~D~i~~~~~~~~--------------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~ 138 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA--------------------------PGVFAAAWKRL----PVGGRLVANAVTV---ESEQMLWA 138 (178)
T ss_dssp CSCCSEEEECC-TTC--------------------------TTHHHHHHHTC----CTTCEEEEEECSH---HHHHHHHH
T ss_pred CCCCCEEEECCcccH--------------------------HHHHHHHHHhc----CCCCEEEEEeecc---ccHHHHHH
Confidence 268999998665210 23577777776 9999999988875 45556666
Q ss_pred HHHhCCcEEeec
Q 010971 327 ALKKRDVKLVPC 338 (496)
Q Consensus 327 ~L~~~~~~lv~~ 338 (496)
+++..++++..+
T Consensus 139 ~~~~~~~~~~~~ 150 (178)
T 3hm2_A 139 LRKQFGGTISSF 150 (178)
T ss_dssp HHHHHCCEEEEE
T ss_pred HHHHcCCeeEEE
Confidence 677666666544
No 53
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.36 E-value=3.9e-12 Score=122.70 Aligned_cols=134 Identities=20% Similarity=0.175 Sum_probs=102.8
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-CCCeEEEEecCCCCCccccCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~-g~~nv~v~~~D~~~~~~~~~~ 247 (496)
..+..+++.++.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++++... |..++.+...|+...+ +..
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~--~~~ 164 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE--LEE 164 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC--CCT
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--CCC
Confidence 4455677889999999999999999999998765689999999999999999999998 8778999999987653 333
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHH
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~ 327 (496)
+.||+|++|+|+. ..+|..+.++| +|||+|+.++.+. +.-.-+...
T Consensus 165 ~~~D~v~~~~~~~---------------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~ 210 (258)
T 2pwy_A 165 AAYDGVALDLMEP---------------------------WKVLEKAALAL----KPDRFLVAYLPNI---TQVLELVRA 210 (258)
T ss_dssp TCEEEEEEESSCG---------------------------GGGHHHHHHHE----EEEEEEEEEESCH---HHHHHHHHH
T ss_pred CCcCEEEECCcCH---------------------------HHHHHHHHHhC----CCCCEEEEEeCCH---HHHHHHHHH
Confidence 6899999988721 13577777776 9999999877654 112222233
Q ss_pred HHhCCcEEeec
Q 010971 328 LKKRDVKLVPC 338 (496)
Q Consensus 328 L~~~~~~lv~~ 338 (496)
|+..++..+.+
T Consensus 211 l~~~gf~~~~~ 221 (258)
T 2pwy_A 211 AEAHPFRLERV 221 (258)
T ss_dssp HTTTTEEEEEE
T ss_pred HHHCCCceEEE
Confidence 44556655443
No 54
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.36 E-value=1.2e-12 Score=126.53 Aligned_cols=128 Identities=20% Similarity=0.248 Sum_probs=100.6
Q ss_pred hhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccC
Q 010971 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLG 246 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~ 246 (496)
......+++.+|.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.++++++.+|+.+ +.+...|+... +.
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~ 159 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG---IE 159 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC---CC
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc---cC
Confidence 344566788899999999999999999999997767899999999999999999999999987 99999998754 33
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~ 326 (496)
.+.||.|++|+|+. ..+|.++.++| +|||+|+..+-+. +....+..
T Consensus 160 ~~~~D~v~~~~~~~---------------------------~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~ 205 (255)
T 3mb5_A 160 EENVDHVILDLPQP---------------------------ERVVEHAAKAL----KPGGFFVAYTPCS---NQVMRLHE 205 (255)
T ss_dssp CCSEEEEEECSSCG---------------------------GGGHHHHHHHE----EEEEEEEEEESSH---HHHHHHHH
T ss_pred CCCcCEEEECCCCH---------------------------HHHHHHHHHHc----CCCCEEEEEECCH---HHHHHHHH
Confidence 46799999998832 13477777776 9999998654332 22333444
Q ss_pred HHHhCC
Q 010971 327 ALKKRD 332 (496)
Q Consensus 327 ~L~~~~ 332 (496)
.+++.+
T Consensus 206 ~l~~~g 211 (255)
T 3mb5_A 206 KLREFK 211 (255)
T ss_dssp HHHHTG
T ss_pred HHHHcC
Confidence 555555
No 55
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.36 E-value=1.1e-12 Score=125.90 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=82.3
Q ss_pred ccEEEeCC--cchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEE
Q 010971 158 GFYMLQSA--SSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVC 234 (496)
Q Consensus 158 G~~~iQd~--sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~ 234 (496)
|+|..+.. ...+...+....++.+|||+|||+|+.+.+++.. .+.|+|+|+++.+++.+++|+..+|+ .++.++
T Consensus 56 ~~~~~~~~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 132 (241)
T 3gdh_A 56 GWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFI 132 (241)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred ceeecCHHHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEE
Confidence 44444433 3344444444458999999999999999999985 27999999999999999999999999 589999
Q ss_pred ecCCCCCccccCCCCcCEEEECCCCCCCCccc
Q 010971 235 NYDGNELPKVLGLNTVDRVLLDAPCSGTGVIS 266 (496)
Q Consensus 235 ~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~ 266 (496)
+.|+..++. ...||+|++|+||.+.+...
T Consensus 133 ~~d~~~~~~---~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 133 CGDFLLLAS---FLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp ESCHHHHGG---GCCCSEEEECCCCSSGGGGG
T ss_pred ECChHHhcc---cCCCCEEEECCCcCCcchhh
Confidence 999987752 36899999999999876543
No 56
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.35 E-value=1.7e-12 Score=122.39 Aligned_cols=112 Identities=18% Similarity=0.125 Sum_probs=85.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC--CeEEEEecCCCCCccccCCCC-cCEEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV--TNTIVCNYDGNELPKVLGLNT-VDRVL 254 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~--~nv~v~~~D~~~~~~~~~~~~-fD~VL 254 (496)
++.+|||+|||+|..+..++.. +.+.|+++|+|+..++.+++|+..+|+ .++.+++.|+..+......+. ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 6889999999999999987665 236899999999999999999999999 689999999876533222367 99999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+|+|+. .+. ...++....+ .+.|+|||+|++++|+..
T Consensus 131 ~~~~~~-~~~----------------------~~~~l~~~~~--~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 131 LDPPFH-FNL----------------------AEQAISLLCE--NNWLKPNALIYVETEKDK 167 (201)
T ss_dssp ECCCSS-SCH----------------------HHHHHHHHHH--TTCEEEEEEEEEEEESSS
T ss_pred ECCCCC-Ccc----------------------HHHHHHHHHh--cCccCCCcEEEEEECCCC
Confidence 999942 110 1123433322 122499999999999875
No 57
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.35 E-value=6.9e-13 Score=129.94 Aligned_cols=130 Identities=13% Similarity=0.047 Sum_probs=98.0
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc-cCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~-~~~~~fD~VL 254 (496)
+.++.+|||+|||+|..++.+|...+ .+.|+++|+++.++..+++|++++|+.|+.++++|+..++.. ...+.||.|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 46789999999999999999998874 479999999999999999999999999999999998766431 1136899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~ 334 (496)
+.+- .. ...++..+.++| +|||++++..+....+|-+ .+...+...+++
T Consensus 157 s~a~----------------~~----------~~~ll~~~~~~L----kpgG~l~~~~g~~~~~e~~-~~~~~l~~~G~~ 205 (249)
T 3g89_A 157 ARAV----------------AP----------LCVLSELLLPFL----EVGGAAVAMKGPRVEEELA-PLPPALERLGGR 205 (249)
T ss_dssp EESS----------------CC----------HHHHHHHHGGGE----EEEEEEEEEECSCCHHHHT-THHHHHHHHTEE
T ss_pred ECCc----------------CC----------HHHHHHHHHHHc----CCCeEEEEEeCCCcHHHHH-HHHHHHHHcCCe
Confidence 8531 00 124566666765 9999999988875443322 233445566666
Q ss_pred Eee
Q 010971 335 LVP 337 (496)
Q Consensus 335 lv~ 337 (496)
++.
T Consensus 206 ~~~ 208 (249)
T 3g89_A 206 LGE 208 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 58
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.34 E-value=6.3e-12 Score=118.89 Aligned_cols=140 Identities=14% Similarity=0.124 Sum_probs=100.6
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++...+ .+.|+|+|+++..+..+++|+.+.|+.|+.++..|+..++..+..+.||.|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 4688999999999999999999875 479999999999999999999999999999999999887654445789999999
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEe
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLV 336 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~lv 336 (496)
.|.. ..+.. ..... ..+..+|..+.++| +|||.|+++|-.. ..-..+...+...++.++
T Consensus 119 ~~~~---------~~~~~---~~~~~--~~~~~~l~~~~~~L----kpgG~l~~~~~~~---~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 119 FSDP---------WPKKR---HEKRR--LTYKTFLDTFKRIL----PENGEIHFKTDNR---GLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp SCCC---------CCSGG---GGGGS--TTSHHHHHHHHHHS----CTTCEEEEEESCH---HHHHHHHHHHHHHTCEEE
T ss_pred CCCC---------ccccc---hhhhc--cCCHHHHHHHHHHc----CCCcEEEEEeCCH---HHHHHHHHHHHHCCCeee
Confidence 7621 11100 00000 01456778887776 9999998876321 111222233445577766
Q ss_pred ec
Q 010971 337 PC 338 (496)
Q Consensus 337 ~~ 338 (496)
.+
T Consensus 178 ~~ 179 (214)
T 1yzh_A 178 GV 179 (214)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 59
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.34 E-value=8.5e-13 Score=132.56 Aligned_cols=131 Identities=14% Similarity=0.127 Sum_probs=93.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--C--CCeEEEEecCCCCCccccCCCCcCEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G--VTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g--~~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+.+|||+|||+|+.+..++...+ .+.|+++|+++..++.+++++..+ + ..++.++..|+..+.... .+.||+|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~I 167 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNEFDVI 167 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC-SSCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCceEE
Confidence 458999999999999999887643 479999999999999999998652 2 357999999987643222 3689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC--CCcCCHHHHHHHHHhC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI--MVTENEAVIDYALKKR 331 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi--~~eENE~vV~~~L~~~ 331 (496)
++|+|+.+.|.. . ...+.+++..+.+.| +|||.|++.+|+. ..++...+++.+.+.+
T Consensus 168 i~d~~~~~~~~~----~-------------~l~~~~~l~~~~~~L----kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 226 (296)
T 1inl_A 168 IIDSTDPTAGQG----G-------------HLFTEEFYQACYDAL----KEDGVFSAETEDPFYDIGWFKLAYRRISKVF 226 (296)
T ss_dssp EEEC---------------------------CCSHHHHHHHHHHE----EEEEEEEEECCCTTTTHHHHHHHHHHHHHHC
T ss_pred EEcCCCcccCch----h-------------hhhHHHHHHHHHHhc----CCCcEEEEEccCcccCHHHHHHHHHHHHHHC
Confidence 999987433310 0 002345677777776 9999999999984 4455666666655553
No 60
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.33 E-value=1.2e-12 Score=127.57 Aligned_cols=122 Identities=20% Similarity=0.276 Sum_probs=95.6
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
+.++.+|||+|||+|..+..++.. ..+.|+++|+++..++.+++++...|+.+ +.++..|+..++ +..+.||+|+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~i~ 119 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--FRNEELDLIW 119 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--CCTTCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--CCCCCEEEEE
Confidence 578999999999999999999887 34699999999999999999999999965 999999998876 3347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHH
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L 328 (496)
+..+.... . ...+|..+.++| +|||+|+++++++........+..++
T Consensus 120 ~~~~~~~~-------------~----------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~ 166 (267)
T 3kkz_A 120 SEGAIYNI-------------G----------FERGLNEWRKYL----KKGGYLAVSECSWFTDERPAEINDFW 166 (267)
T ss_dssp ESSCGGGT-------------C----------HHHHHHHHGGGE----EEEEEEEEEEEEESSSCCCHHHHHHH
T ss_pred EcCCceec-------------C----------HHHHHHHHHHHc----CCCCEEEEEEeeecCCCChHHHHHHH
Confidence 86442111 1 123567777765 99999999999876665544444333
No 61
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.33 E-value=1.1e-12 Score=123.65 Aligned_cols=117 Identities=9% Similarity=0.060 Sum_probs=90.8
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~ 247 (496)
+...++...++.+|||+|||+|..|.+++..++..+.|+++|+++.+++.+++++.+.|+.+ +.++.+|+..+.... .
T Consensus 47 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~ 125 (210)
T 3c3p_A 47 LLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ-R 125 (210)
T ss_dssp HHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC-C
T ss_pred HHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC-C
Confidence 33333333467899999999999999999988656899999999999999999999999864 899999986542222 2
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+ ||.|++|+++.. +..++..+.++| +|||+|++.++.+.
T Consensus 126 ~-fD~v~~~~~~~~-------------------------~~~~l~~~~~~L----kpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 126 D-IDILFMDCDVFN-------------------------GADVLERMNRCL----AKNALLIAVNALRR 164 (210)
T ss_dssp S-EEEEEEETTTSC-------------------------HHHHHHHHGGGE----EEEEEEEEESSSSC
T ss_pred C-CCEEEEcCChhh-------------------------hHHHHHHHHHhc----CCCeEEEEECcccc
Confidence 5 999999965321 234577777765 99999999877653
No 62
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.33 E-value=1.2e-11 Score=119.37 Aligned_cols=131 Identities=16% Similarity=0.081 Sum_probs=97.1
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc-cCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~-~~~~~fD~V 253 (496)
.+.++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++++.++|+.++.++++|+..++.. ...+.||.|
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 345788999999999999999998654 479999999999999999999999998999999998765421 013689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~ 333 (496)
++++. .. ...++..+.++| +|||+|++..+....+|-+.+ ...++..++
T Consensus 146 ~~~~~----------------~~----------~~~~l~~~~~~L----kpgG~l~~~~g~~~~~~~~~~-~~~l~~~g~ 194 (240)
T 1xdz_A 146 TARAV----------------AR----------LSVLSELCLPLV----KKNGLFVALKAASAEEELNAG-KKAITTLGG 194 (240)
T ss_dssp EEECC----------------SC----------HHHHHHHHGGGE----EEEEEEEEEECC-CHHHHHHH-HHHHHHTTE
T ss_pred EEecc----------------CC----------HHHHHHHHHHhc----CCCCEEEEEeCCCchHHHHHH-HHHHHHcCC
Confidence 98652 00 234677777765 999999998877654433332 334556666
Q ss_pred EEee
Q 010971 334 KLVP 337 (496)
Q Consensus 334 ~lv~ 337 (496)
+++.
T Consensus 195 ~~~~ 198 (240)
T 1xdz_A 195 ELEN 198 (240)
T ss_dssp EEEE
T ss_pred eEeE
Confidence 6543
No 63
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.33 E-value=5.6e-12 Score=123.62 Aligned_cols=114 Identities=19% Similarity=0.198 Sum_probs=94.5
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-C--CCeEEEEecCCCCCcccc
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-G--VTNTIVCNYDGNELPKVL 245 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~-g--~~nv~v~~~D~~~~~~~~ 245 (496)
..+..+++.+|.+|||+|||+|..+.+++..+++.+.|+++|+++.+++.+++|+... | ..++.+...|+...+ +
T Consensus 90 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~--~ 167 (280)
T 1i9g_A 90 QIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE--L 167 (280)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC--C
T ss_pred HHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC--C
Confidence 4455678889999999999999999999998766689999999999999999999998 7 678999999987664 2
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
..+.||+|++|+| +|. .+|.++.++| +|||+|++++++.
T Consensus 168 ~~~~~D~v~~~~~---------~~~------------------~~l~~~~~~L----~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 168 PDGSVDRAVLDML---------APW------------------EVLDAVSRLL----VAGGVLMVYVATV 206 (280)
T ss_dssp CTTCEEEEEEESS---------CGG------------------GGHHHHHHHE----EEEEEEEEEESSH
T ss_pred CCCceeEEEECCc---------CHH------------------HHHHHHHHhC----CCCCEEEEEeCCH
Confidence 3468999999876 111 3477777776 9999999988765
No 64
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.32 E-value=6.3e-13 Score=126.05 Aligned_cols=120 Identities=12% Similarity=0.135 Sum_probs=94.2
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCcccc
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVL 245 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~ 245 (496)
..+...++...++.+|||+|||+|..|.+++..+++.+.|+++|+++.+++.+++++...|+.+ +.++.+|+..+...+
T Consensus 53 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 132 (225)
T 3tr6_A 53 AQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAEL 132 (225)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHh
Confidence 3444444455678899999999999999999988766899999999999999999999999976 999999986542222
Q ss_pred CC----CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 246 GL----NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~----~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.. +.||.|++|++. ..+..++..+.++| +|||+|++..+.+
T Consensus 133 ~~~~~~~~fD~v~~~~~~-------------------------~~~~~~l~~~~~~L----~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDADK-------------------------ANTDLYYEESLKLL----REGGLIAVDNVLR 177 (225)
T ss_dssp HTTTCTTCEEEEEECSCG-------------------------GGHHHHHHHHHHHE----EEEEEEEEECSSG
T ss_pred hhccCCCCccEEEECCCH-------------------------HHHHHHHHHHHHhc----CCCcEEEEeCCCc
Confidence 11 689999999871 11234677777776 9999999877664
No 65
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.32 E-value=1.8e-11 Score=115.12 Aligned_cols=141 Identities=16% Similarity=0.240 Sum_probs=108.6
Q ss_pred HHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCC
Q 010971 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~ 249 (496)
....+.+.++.+|||+|||+|..+..++...+..+.|+++|+++..++.+++++...|+.++.++..|+..++ +..+.
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 106 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP--LPDNT 106 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS--SCSSC
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC--CCCCC
Confidence 3455677889999999999999999999987556799999999999999999999999989999999998876 33478
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc---------CC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT---------EN 320 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e---------EN 320 (496)
||+|++... +..-++ ...+|..+.++| +|||+|+++++..... -+
T Consensus 107 fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~ 160 (219)
T 3dh0_A 107 VDFIFMAFT------FHELSE----------------PLKFLEELKRVA----KPFAYLAIIDWKKEERDKGPPPEEVYS 160 (219)
T ss_dssp EEEEEEESC------GGGCSS----------------HHHHHHHHHHHE----EEEEEEEEEEECSSCCSSSCCGGGSCC
T ss_pred eeEEEeehh------hhhcCC----------------HHHHHHHHHHHh----CCCeEEEEEEecccccccCCchhcccC
Confidence 999998532 111110 145677788876 9999999988664432 13
Q ss_pred HHHHHHHHHhCCcEEeec
Q 010971 321 EAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 321 E~vV~~~L~~~~~~lv~~ 338 (496)
.+.+..+++..+++++..
T Consensus 161 ~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 161 EWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
Confidence 566667777777776553
No 66
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.30 E-value=6.6e-12 Score=119.51 Aligned_cols=118 Identities=17% Similarity=0.151 Sum_probs=91.5
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..||...+ ...|+|+|+++.++..+++++.+.|+.|+.++.+|+..++..+..+.||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 4688999999999999999999864 479999999999999999999999999999999999887654555789999987
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.|+-- .+....+.+ + .+..+|..+.+.| +|||.|+++|-
T Consensus 116 ~~~p~----~~~~~~~~r--------l--~~~~~l~~~~~~L----kpgG~l~~~td 154 (213)
T 2fca_A 116 FSDPW----PKKRHEKRR--------L--TYSHFLKKYEEVM----GKGGSIHFKTD 154 (213)
T ss_dssp SCCCC----CSGGGGGGS--------T--TSHHHHHHHHHHH----TTSCEEEEEES
T ss_pred CCCCC----cCccccccc--------c--CcHHHHHHHHHHc----CCCCEEEEEeC
Confidence 65310 000000101 0 1456788888877 99999998873
No 67
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.30 E-value=1.8e-11 Score=126.67 Aligned_cols=155 Identities=14% Similarity=0.112 Sum_probs=111.8
Q ss_pred cccccccEEEeCCcch------hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc
Q 010971 153 PEYMAGFYMLQSASSF------LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (496)
Q Consensus 153 ~~~~~G~~~iQd~sS~------l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~ 226 (496)
..+..|+-..|..+.+ ..+.++ +.++.+|||+|||+|+.++.++.... .+.|+|+|+|+..++.++.|+...
T Consensus 187 ~l~~rgyr~~~~~a~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~ 264 (373)
T 3tm4_A 187 SLHKRPWRVYDHPAHLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAA 264 (373)
T ss_dssp CTTCCTTCCSCCTTCCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHT
T ss_pred ccccCCcccccCCCCccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHc
Confidence 4566675555544432 122334 67899999999999999999887643 358999999999999999999999
Q ss_pred CC-CeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC
Q 010971 227 GV-TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG 305 (496)
Q Consensus 227 g~-~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG 305 (496)
|+ .++.+.+.|+..++.. .+.||+|++|||+.-. ......+..++.+++..+.+. | |
T Consensus 265 gl~~~i~~~~~D~~~~~~~--~~~fD~Ii~npPyg~r--------------~~~~~~~~~ly~~~~~~l~r~----l--~ 322 (373)
T 3tm4_A 265 GVLDKIKFIQGDATQLSQY--VDSVDFAISNLPYGLK--------------IGKKSMIPDLYMKFFNELAKV----L--E 322 (373)
T ss_dssp TCGGGCEEEECCGGGGGGT--CSCEEEEEEECCCC--------------------CCHHHHHHHHHHHHHHH----E--E
T ss_pred CCCCceEEEECChhhCCcc--cCCcCEEEECCCCCcc--------------cCcchhHHHHHHHHHHHHHHH----c--C
Confidence 99 5799999999887632 3789999999996321 011112344566777777665 3 7
Q ss_pred cEEEEEeCCCCCcCCHHHHHHHHHhCCcEEee
Q 010971 306 GYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 306 G~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~ 337 (496)
|.++|.|| +...+...+.+.++++..
T Consensus 323 g~~~~i~~------~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 323 KRGVFITT------EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp EEEEEEES------CHHHHHHHHHHTTEEEEE
T ss_pred CeEEEEEC------CHHHHHHHHHHcCCEEEE
Confidence 88889888 445566667777776654
No 68
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.29 E-value=1.5e-11 Score=115.13 Aligned_cols=125 Identities=12% Similarity=0.079 Sum_probs=98.5
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++..++.+++++...|+.++.+...|+..++ .+.||.|++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----~~~fD~i~~ 131 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV----DGKFDLIVA 131 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC----CSCEEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC----CCCceEEEE
Confidence 568999999999999999998864 34699999999999999999999999988999999987654 278999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEE
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~l 335 (496)
++|. .....+|..+.++| +|||+|++++... +....+...+.+.++++
T Consensus 132 ~~~~-------------------------~~~~~~l~~~~~~L----~~gG~l~~~~~~~---~~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 132 NILA-------------------------EILLDLIPQLDSHL----NEDGQVIFSGIDY---LQLPKIEQALAENSFQI 179 (205)
T ss_dssp ESCH-------------------------HHHHHHGGGSGGGE----EEEEEEEEEEEEG---GGHHHHHHHHHHTTEEE
T ss_pred CCcH-------------------------HHHHHHHHHHHHhc----CCCCEEEEEecCc---ccHHHHHHHHHHcCCce
Confidence 8761 11234566666655 9999999976543 34556667777778777
Q ss_pred eec
Q 010971 336 VPC 338 (496)
Q Consensus 336 v~~ 338 (496)
+..
T Consensus 180 ~~~ 182 (205)
T 3grz_A 180 DLK 182 (205)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 69
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.29 E-value=2.7e-11 Score=113.24 Aligned_cols=126 Identities=20% Similarity=0.202 Sum_probs=96.9
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
.+.++.+|||+|||+|..+..++.. +.+.|+++|+++..++.++.|+..+|+ ++.+++.|+..++ ..||+|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~-----~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN-----SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC-----CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC-----CCCCEEE
Confidence 4668999999999999999998876 335899999999999999999999998 8999999988764 4799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~ 334 (496)
+|||+.... +. ....+|..+.+.+ || +|+.| +.+.++.+.+..++...+++
T Consensus 118 ~~~p~~~~~---~~-----------------~~~~~l~~~~~~l------~~--~~~~~-~~~~~~~~~~~~~l~~~g~~ 168 (207)
T 1wy7_A 118 MNPPFGSQR---KH-----------------ADRPFLLKAFEIS------DV--VYSIH-LAKPEVRRFIEKFSWEHGFV 168 (207)
T ss_dssp ECCCCSSSS---TT-----------------TTHHHHHHHHHHC------SE--EEEEE-ECCHHHHHHHHHHHHHTTEE
T ss_pred EcCCCcccc---CC-----------------chHHHHHHHHHhc------Cc--EEEEE-eCCcCCHHHHHHHHHHCCCe
Confidence 999974321 11 1134567777652 43 67777 33456777788888887766
Q ss_pred Eee
Q 010971 335 LVP 337 (496)
Q Consensus 335 lv~ 337 (496)
+..
T Consensus 169 ~~~ 171 (207)
T 1wy7_A 169 VTH 171 (207)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 70
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.29 E-value=1.1e-11 Score=116.15 Aligned_cols=120 Identities=17% Similarity=0.150 Sum_probs=94.0
Q ss_pred ccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecC
Q 010971 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D 237 (496)
|.++.+..........+.+.++.+|||+|||+|..+.+++.. .+.|+++|+++.+++.+++++..+|+.++.+...|
T Consensus 57 ~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 133 (210)
T 3lbf_A 57 GQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD 133 (210)
T ss_dssp SCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred CCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECC
Confidence 444444443444556678889999999999999999999987 37999999999999999999999999999999999
Q ss_pred CCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 238 ~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+...... .+.||+|+++.++... | ..+.++| +|||+|+.+...
T Consensus 134 ~~~~~~~--~~~~D~i~~~~~~~~~------~----------------------~~~~~~L----~pgG~lv~~~~~ 176 (210)
T 3lbf_A 134 GWQGWQA--RAPFDAIIVTAAPPEI------P----------------------TALMTQL----DEGGILVLPVGE 176 (210)
T ss_dssp GGGCCGG--GCCEEEEEESSBCSSC------C----------------------THHHHTE----EEEEEEEEEECS
T ss_pred cccCCcc--CCCccEEEEccchhhh------h----------------------HHHHHhc----ccCcEEEEEEcC
Confidence 8775432 3789999998654221 1 1234554 999999998766
No 71
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.28 E-value=4e-11 Score=115.53 Aligned_cols=115 Identities=17% Similarity=0.284 Sum_probs=92.4
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+.++.+|||+|||+|..+..++...+ +.|+++|+++..+..+++++...|+.+ +.++..|+..++ +..+.||+|
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v 118 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP--FQNEELDLI 118 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC--CCCCCEEEE
Confidence 456889999999999999999999864 499999999999999999999999976 999999998876 334789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTEN 320 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eEN 320 (496)
++....... .. ..+|..+.++| +|||+|+++++++.....
T Consensus 119 ~~~~~l~~~-------------~~----------~~~l~~~~~~L----~pgG~l~~~~~~~~~~~~ 158 (257)
T 3f4k_A 119 WSEGAIYNI-------------GF----------ERGMNEWSKYL----KKGGFIAVSEASWFTSER 158 (257)
T ss_dssp EEESCSCCC-------------CH----------HHHHHHHHTTE----EEEEEEEEEEEEESSSCC
T ss_pred EecChHhhc-------------CH----------HHHHHHHHHHc----CCCcEEEEEEeeccCCCC
Confidence 986432111 11 23577777776 999999999987655443
No 72
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.28 E-value=7e-12 Score=118.23 Aligned_cols=111 Identities=16% Similarity=0.073 Sum_probs=84.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDa 257 (496)
++.+|||+|||+|..++.+++. ....|+++|+|+..++.+++|+..+|+.++.+++.|+..+... ..+.||+|++|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~-~~~~fD~V~~~~ 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ-KGTPHNIVFVDP 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS-CCCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh-cCCCCCEEEECC
Confidence 6899999999999999987765 2358999999999999999999999998899999998764221 236899999999
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 258 PCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|+. .+. ...++....+. +.|+|||+|++++|+..
T Consensus 131 p~~-~~~----------------------~~~~l~~l~~~--~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 131 PFR-RGL----------------------LEETINLLEDN--GWLADEALIYVESEVEN 164 (202)
T ss_dssp SSS-TTT----------------------HHHHHHHHHHT--TCEEEEEEEEEEEEGGG
T ss_pred CCC-CCc----------------------HHHHHHHHHhc--CccCCCcEEEEEECCCc
Confidence 942 110 01233333331 12499999999988754
No 73
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.28 E-value=3.2e-12 Score=124.84 Aligned_cols=123 Identities=16% Similarity=0.165 Sum_probs=94.7
Q ss_pred eCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCC
Q 010971 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL 241 (496)
Q Consensus 163 Qd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~ 241 (496)
+.....+...++...++.+|||+|||+|..++.++..++..+.|+++|+++.+++.+++++.+.|+. ++.++.+|+..+
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 143 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV 143 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH
Confidence 3333444444455556789999999999999999999876689999999999999999999999995 599999998764
Q ss_pred -cccc----CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 242 -PKVL----GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 242 -~~~~----~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+... ..+.||.|++|+++. ....++..+.++| +|||+|++..+-
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpGG~lv~d~~~ 192 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDADKD-------------------------NYLNYHKRLIDLV----KVGGVIGYDNTL 192 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSCST-------------------------THHHHHHHHHHHB----CTTCCEEEECTT
T ss_pred HHHHHhccCCCCCEEEEEEcCchH-------------------------HHHHHHHHHHHhC----CCCeEEEEecCC
Confidence 2211 136899999998631 0134577777776 999999987643
No 74
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.28 E-value=4.3e-12 Score=122.08 Aligned_cols=122 Identities=12% Similarity=0.110 Sum_probs=95.2
Q ss_pred eCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCC
Q 010971 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNEL 241 (496)
Q Consensus 163 Qd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~ 241 (496)
+.....+...++...++.+|||+|||+|..+..++...+ .+.|+++|+++.+++.+++++.+.|+. ++.++.+|+..+
T Consensus 56 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 56 DRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 333334445555556789999999999999999998544 589999999999999999999999996 799999999775
Q ss_pred cc-ccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 242 PK-VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 242 ~~-~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.. .. .+.||+|++|+++.. +..++..+.++| +|||+||+..+.+
T Consensus 135 ~~~~~-~~~fD~V~~~~~~~~-------------------------~~~~l~~~~~~L----kpgG~lv~d~~~~ 179 (232)
T 3ntv_A 135 FENVN-DKVYDMIFIDAAKAQ-------------------------SKKFFEIYTPLL----KHQGLVITDNVLY 179 (232)
T ss_dssp HHHHT-TSCEEEEEEETTSSS-------------------------HHHHHHHHGGGE----EEEEEEEEECTTG
T ss_pred HHhhc-cCCccEEEEcCcHHH-------------------------HHHHHHHHHHhc----CCCeEEEEeeCCc
Confidence 33 22 378999999987432 234677777776 9999999865544
No 75
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.27 E-value=1.5e-11 Score=116.93 Aligned_cols=104 Identities=18% Similarity=0.216 Sum_probs=85.5
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcC----CCcEEEEEeCCHHHHHHHHHHHHHcC-----CCeEEEEecCCCCCc---
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMK----NTGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDGNELP--- 242 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~----~~g~V~A~D~s~~rl~~l~~nl~r~g-----~~nv~v~~~D~~~~~--- 242 (496)
.+.++.+|||+|||+|..+.+++..++ +.+.|+++|+++..++.+++++...| ..++.+...|+....
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 477899999999999999999999875 55799999999999999999999998 678999999987643
Q ss_pred -cccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 243 -KVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 243 -~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.. ...||+|++++++.. ++..+.+.| +|||+||.+.
T Consensus 157 ~~~--~~~fD~I~~~~~~~~----------------------------~~~~~~~~L----kpgG~lv~~~ 193 (227)
T 2pbf_A 157 KKE--LGLFDAIHVGASASE----------------------------LPEILVDLL----AENGKLIIPI 193 (227)
T ss_dssp HHH--HCCEEEEEECSBBSS----------------------------CCHHHHHHE----EEEEEEEEEE
T ss_pred Ccc--CCCcCEEEECCchHH----------------------------HHHHHHHhc----CCCcEEEEEE
Confidence 22 268999999988642 134455665 9999998764
No 76
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.27 E-value=4.5e-11 Score=114.90 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=98.2
Q ss_pred eCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc
Q 010971 163 QSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP 242 (496)
Q Consensus 163 Qd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~ 242 (496)
|++++...+..+++.++.+|||+|||+|..+..++... +.|+++|+++..++.+++++...|+.++.+...|+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 6 HHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP 82 (239)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC
T ss_pred cCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC
Confidence 56777888889999999999999999999999888763 589999999999999999999999999999999998876
Q ss_pred cccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 243 KVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 243 ~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+..+.||+|++... +.. +. + ...+|..+.++| +|||+|+.+++..
T Consensus 83 --~~~~~fD~v~~~~~------l~~-------~~--~-------~~~~l~~~~~~L----kpgG~l~~~~~~~ 127 (239)
T 1xxl_A 83 --FPDDSFDIITCRYA------AHH-------FS--D-------VRKAVREVARVL----KQDGRFLLVDHYA 127 (239)
T ss_dssp --SCTTCEEEEEEESC------GGG-------CS--C-------HHHHHHHHHHHE----EEEEEEEEEEECB
T ss_pred --CCCCcEEEEEECCc------hhh-------cc--C-------HHHHHHHHHHHc----CCCcEEEEEEcCC
Confidence 33478999997422 111 10 1 134677777776 9999999877653
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.27 E-value=3.1e-11 Score=110.17 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=94.7
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe--EEEEecCCCCCccc
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN--TIVCNYDGNELPKV 244 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n--v~v~~~D~~~~~~~ 244 (496)
+......+.+.++.+|||+|||+|..+..++.. .+.|+++|+++..++.++.++...++.+ +.+...|+.....
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~- 116 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK- 116 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc-
Confidence 344455667778999999999999999988876 4799999999999999999999999987 9999999876432
Q ss_pred cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 245 ~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.+.||+|++++|... .. .....+|..+.++| +|||.+++++++.
T Consensus 117 --~~~~D~v~~~~~~~~--------------~~-------~~~~~~l~~~~~~L----~~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 --DRKYNKIITNPPIRA--------------GK-------EVLHRIIEEGKELL----KDNGEIWVVIQTK 160 (194)
T ss_dssp --TSCEEEEEECCCSTT--------------CH-------HHHHHHHHHHHHHE----EEEEEEEEEEEST
T ss_pred --cCCceEEEECCCccc--------------ch-------hHHHHHHHHHHHHc----CCCCEEEEEECCC
Confidence 368999999987421 11 12345677777776 9999999988775
No 78
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.26 E-value=5.8e-12 Score=121.34 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=92.5
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCC-cccc-
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNEL-PKVL- 245 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~-~~~~- 245 (496)
+...++...++.+|||+|||+|..+..++..++..+.|+++|+++..++.+++++.+.|+.+ +.++.+|+... +...
T Consensus 63 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~ 142 (232)
T 3cbg_A 63 FLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQ 142 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh
Confidence 33333444567899999999999999999988756899999999999999999999999964 89999997553 2211
Q ss_pred CC--CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 246 GL--NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 246 ~~--~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
.. +.||.|++|+++. ....++..+.++| +|||+||+.++.+.
T Consensus 143 ~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~L----kpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 143 GKPLPEFDLIFIDADKR-------------------------NYPRYYEIGLNLL----RRGGLMVIDNVLWH 186 (232)
T ss_dssp SSSCCCEEEEEECSCGG-------------------------GHHHHHHHHHHTE----EEEEEEEEECTTGG
T ss_pred cCCCCCcCEEEECCCHH-------------------------HHHHHHHHHHHHc----CCCeEEEEeCCCcC
Confidence 11 6799999997620 1134577777776 99999999988764
No 79
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.26 E-value=2.2e-11 Score=121.97 Aligned_cols=117 Identities=11% Similarity=0.074 Sum_probs=93.1
Q ss_pred HHHhcC-CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCC
Q 010971 170 PVMALA-PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 170 ~v~~L~-~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~ 247 (496)
....+. +.++.+|||+|||+|..+..++... ...|+++|+++..++.+++++...|+. ++.+...|+..++ +..
T Consensus 108 l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~ 183 (312)
T 3vc1_A 108 LMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP--FDK 183 (312)
T ss_dssp HHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--CCT
T ss_pred HHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC--CCC
Confidence 344555 7889999999999999999999876 368999999999999999999999987 6999999998876 334
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
+.||+|++.- ++. ... +..+|..+.++| +|||+|++++.....
T Consensus 184 ~~fD~V~~~~------~l~-------~~~----------~~~~l~~~~~~L----kpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 184 GAVTASWNNE------STM-------YVD----------LHDLFSEHSRFL----KVGGRYVTITGCWNP 226 (312)
T ss_dssp TCEEEEEEES------CGG-------GSC----------HHHHHHHHHHHE----EEEEEEEEEEEEECT
T ss_pred CCEeEEEECC------chh-------hCC----------HHHHHHHHHHHc----CCCcEEEEEEccccc
Confidence 7899999721 111 011 355788888876 999999998865443
No 80
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.26 E-value=3.8e-11 Score=111.55 Aligned_cols=126 Identities=17% Similarity=0.156 Sum_probs=90.3
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc-----------
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----------- 243 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----------- 243 (496)
+.++.+|||+|||||+.|.+++..+++ .+.|+|+|+++. ....++.++..|+...+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~-----------~~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM-----------DPIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC-----------CCCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc-----------CCCCCceEEEccccchhhhhhcccccccc
Confidence 468899999999999999999998863 589999999983 134578888999877640
Q ss_pred ------------ccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 244 ------------VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 244 ------------~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+....||+|++|.++...|.. ..+......++..+|..+.++| +|||.|+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~-----------~~d~~~~~~~~~~~l~~~~~~L----kpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNK-----------IDDHLNSCELTLSITHFMEQYI----NIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCc-----------ccCHHHHHHHHHHHHHHHHHHc----cCCCEEEEE
Confidence 0234689999999876544421 1223333455677888888886 999999986
Q ss_pred eCCCCCcCCHHHHHHHHHh
Q 010971 312 TCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 312 TCSi~~eENE~vV~~~L~~ 330 (496)
+.. .++...+...+..
T Consensus 154 ~~~---~~~~~~l~~~l~~ 169 (201)
T 2plw_A 154 MYL---GSQTNNLKTYLKG 169 (201)
T ss_dssp EEC---STTHHHHHHHHHT
T ss_pred EeC---CCCHHHHHHHHHH
Confidence 543 3455555555554
No 81
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.25 E-value=2.4e-11 Score=122.54 Aligned_cols=92 Identities=16% Similarity=0.235 Sum_probs=78.5
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~ 248 (496)
.....+.+++|.+|||+|||+|..+.+++......+.|+++|+++..++.+++++...|+.++.+...|+...+.. .+
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~--~~ 143 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE--FS 143 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG--GC
T ss_pred HHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc--CC
Confidence 4455678889999999999999999999998764578999999999999999999999999999999998775432 26
Q ss_pred CcCEEEECCCCCCC
Q 010971 249 TVDRVLLDAPCSGT 262 (496)
Q Consensus 249 ~fD~VLlDaPCSg~ 262 (496)
.||+|++++++...
T Consensus 144 ~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 144 PYDVIFVTVGVDEV 157 (317)
T ss_dssp CEEEEEECSBBSCC
T ss_pred CeEEEEEcCCHHHH
Confidence 89999999886543
No 82
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.25 E-value=9.3e-11 Score=113.55 Aligned_cols=148 Identities=14% Similarity=0.105 Sum_probs=96.0
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCC-CccccC---CCCcCE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNE-LPKVLG---LNTVDR 252 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~-~~~~~~---~~~fD~ 252 (496)
++.+|||+|||+|..+..++...++ +.|+++|+++..++.+++|+..+|+.+ +.+++.|+.. +...+. ...||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNG-WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 5789999999999999999987643 799999999999999999999999976 9999999765 222222 157999
Q ss_pred EEECCCCCCCCc-cc----C-----CchhhccCC------HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 253 VLLDAPCSGTGV-IS----K-----DESVKTSKS------LEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDaPCSg~G~-i~----r-----~p~~k~~~s------~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|++|||+...+. +. + .|...+... +... + .....++..+..++ +++|.++. .+.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~--l-~~~~~~~~~~~~~l----~~~g~~~~---~~~ 213 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGE--L-EFVKRIIHDSLQLK----KRLRWYSC---MLG 213 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTH--H-HHHHHHHHHHHHHG----GGBSCEEE---EES
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCE--E-EEEHHHHHHHHhcc----cceEEEEE---CCC
Confidence 999999987651 10 1 111111000 0111 1 12234566666665 88886643 333
Q ss_pred CcCCHHHHHHHHHhCCcEEe
Q 010971 317 VTENEAVIDYALKKRDVKLV 336 (496)
Q Consensus 317 ~eENE~vV~~~L~~~~~~lv 336 (496)
...+...+..++++.++..+
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v 233 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKV 233 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEE
T ss_pred ChhHHHHHHHHHHHcCCCce
Confidence 44554556667777665443
No 83
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.24 E-value=8.7e-11 Score=113.82 Aligned_cols=132 Identities=16% Similarity=0.165 Sum_probs=94.6
Q ss_pred CcccccccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeE
Q 010971 152 TPEYMAGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 152 ~~~~~~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv 231 (496)
.+.|.......|.......+..+.+.++.+|||+|||+|..+..++... +.|+++|+|+.+++.+++++...|+.++
T Consensus 11 ~~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v 87 (260)
T 1vl5_A 11 HHMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQV 87 (260)
T ss_dssp ------------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSE
T ss_pred ceeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCce
Confidence 4567667777777776677777888899999999999999999888764 4899999999999999999999999899
Q ss_pred EEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 232 IVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 232 ~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.++..|+..++ +..+.||+|++... +. +-.. ...+|..+.++| +|||+|+.+
T Consensus 88 ~~~~~d~~~l~--~~~~~fD~V~~~~~------l~------~~~d----------~~~~l~~~~r~L----kpgG~l~~~ 139 (260)
T 1vl5_A 88 EYVQGDAEQMP--FTDERFHIVTCRIA------AH------HFPN----------PASFVSEAYRVL----KKGGQLLLV 139 (260)
T ss_dssp EEEECCC-CCC--SCTTCEEEEEEESC------GG------GCSC----------HHHHHHHHHHHE----EEEEEEEEE
T ss_pred EEEEecHHhCC--CCCCCEEEEEEhhh------hH------hcCC----------HHHHHHHHHHHc----CCCCEEEEE
Confidence 99999998876 34478999997421 11 1011 124677777776 999999987
Q ss_pred eCC
Q 010971 312 TCS 314 (496)
Q Consensus 312 TCS 314 (496)
+..
T Consensus 140 ~~~ 142 (260)
T 1vl5_A 140 DNS 142 (260)
T ss_dssp EEE
T ss_pred EcC
Confidence 543
No 84
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.24 E-value=3.2e-11 Score=121.52 Aligned_cols=106 Identities=15% Similarity=0.107 Sum_probs=86.0
Q ss_pred hcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCE
Q 010971 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
++.+++|++|||+|||||+.|..+++... .+.|+++|+++.+++.+++++.+.|+.++.++.+|+..++ .+.||+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~----d~~FDv 191 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID----GLEFDV 191 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG----GCCCSE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC----CCCcCE
Confidence 56788999999999999998865544433 4799999999999999999999999988999999998875 278999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
|++++- . + -..+++..+.+.| +|||+||..+
T Consensus 192 V~~~a~------~---~----------------d~~~~l~el~r~L----kPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAAL------A---E----------------PKRRVFRNIHRYV----DTETRIIYRT 222 (298)
T ss_dssp EEECTT------C---S----------------CHHHHHHHHHHHC----CTTCEEEEEE
T ss_pred EEECCC------c---c----------------CHHHHHHHHHHHc----CCCcEEEEEc
Confidence 998542 0 1 1234677777775 9999999865
No 85
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.23 E-value=2.5e-11 Score=110.95 Aligned_cols=115 Identities=17% Similarity=0.139 Sum_probs=84.7
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCcccc--CCCCcCE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVL--GLNTVDR 252 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~--~~~~fD~ 252 (496)
..++.+|||+|||+|..+..++.. +...|+++|+++..++.++.|+...++. ++.+++.|+..+...+ ....||+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 357899999999999999988773 3469999999999999999999999984 6999999987643211 1368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
|++|+|.. .+ ....+ .. .+. +.++ |+|||+|++++|+-..
T Consensus 120 i~~~~~~~-~~------------~~~~~------~~-~l~-~~~~----L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 120 VLLDPPYA-KQ------------EIVSQ------LE-KML-ERQL----LTNEAVIVCETDKTVK 159 (187)
T ss_dssp EEECCCGG-GC------------CHHHH------HH-HHH-HTTC----EEEEEEEEEEEETTCC
T ss_pred EEECCCCC-ch------------hHHHH------HH-HHH-Hhcc----cCCCCEEEEEeCCccc
Confidence 99999832 10 11111 01 111 2444 4999999999988643
No 86
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.23 E-value=1e-11 Score=126.65 Aligned_cols=144 Identities=16% Similarity=0.167 Sum_probs=100.9
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCC----cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCc
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNT----GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~----g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~f 250 (496)
.+.++.+|||+|||+|+.++.++..++.. ..|+|+|+++..++.++.|+...|+ ++.+.++|+.... ....|
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~---~~~~f 202 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL---LVDPV 202 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC---CCCCE
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc---ccCCc
Confidence 56678999999999999999999887543 6899999999999999999999998 6788899986532 23689
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC-CCCCcCCHHHHHHHHH
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC-SIMVTENEAVIDYALK 329 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC-Si~~eENE~vV~~~L~ 329 (496)
|+|++|||+ |.+.. ++....+...........+..++.++++.| +|||++++.++ +++.......+...|.
T Consensus 203 D~Ii~NPPf---g~~~~-~~~~~~~~~~~~~g~~~~~~~~l~~~~~~L----k~gG~~~~v~p~~~~~~~~~~~ir~~l~ 274 (344)
T 2f8l_A 203 DVVISDLPV---GYYPD-DENAKTFELCREEGHSFAHFLFIEQGMRYT----KPGGYLFFLVPDAMFGTSDFAKVDKFIK 274 (344)
T ss_dssp EEEEEECCC---SEESC-HHHHTTSTTCCSSSCEEHHHHHHHHHHHTE----EEEEEEEEEEEGGGGGSTTHHHHHHHHH
T ss_pred cEEEECCCC---CCcCc-hhhhhhccccCCCCcchHHHHHHHHHHHHh----CCCCEEEEEECchhcCCchHHHHHHHHH
Confidence 999999997 33321 111111110000011224556788999887 99999988873 3444444555554444
Q ss_pred h
Q 010971 330 K 330 (496)
Q Consensus 330 ~ 330 (496)
+
T Consensus 275 ~ 275 (344)
T 2f8l_A 275 K 275 (344)
T ss_dssp H
T ss_pred h
Confidence 4
No 87
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.23 E-value=1.6e-11 Score=119.01 Aligned_cols=117 Identities=16% Similarity=0.251 Sum_probs=88.5
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--------CCCeEEEEecCCCC-CccccCC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--------GVTNTIVCNYDGNE-LPKVLGL 247 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--------g~~nv~v~~~D~~~-~~~~~~~ 247 (496)
.++.+|||+|||+|+.+..++...+ .+.|+|+|+++..+..+++++..+ |+.|+.++..|+.. ++..+..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 4788999999999999999998864 468999999999999999999987 88899999999987 4544445
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+.||.|++.-|..-. +.. .....+ .+..+|..+.++| +|||+|+++|
T Consensus 127 ~~~d~v~~~~p~p~~---------k~~---~~~~r~--~~~~~l~~~~~~L----kpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHF---------KQR---KHKARI--ITNTLLSEYAYVL----KEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------------------CSSC--CCHHHHHHHHHHE----EEEEEEEEEE
T ss_pred cccCEEEEECCCccc---------ccc---hhHHhh--ccHHHHHHHHHHc----CCCCEEEEEe
Confidence 789999876553211 000 000000 1356788888886 9999999865
No 88
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.23 E-value=1.5e-11 Score=112.07 Aligned_cols=128 Identities=19% Similarity=0.290 Sum_probs=97.5
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~ 247 (496)
+....+.+.++.+|||+|||+|..+..++... +.|+++|+++..++.+++++..+|+ .++.+.+.|+...... .
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--~ 98 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK--I 98 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT--S
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc--C
Confidence 44455678899999999999999999888764 7899999999999999999999998 6788998887652111 1
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHH
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~ 327 (496)
..||+|+++.+.. + ...+|..+.++| +|||+|++++|+. ++...+..+
T Consensus 99 ~~~D~v~~~~~~~------------------~-------~~~~l~~~~~~l----~~gG~l~~~~~~~---~~~~~~~~~ 146 (192)
T 1l3i_A 99 PDIDIAVVGGSGG------------------E-------LQEILRIIKDKL----KPGGRIIVTAILL---ETKFEAMEC 146 (192)
T ss_dssp CCEEEEEESCCTT------------------C-------HHHHHHHHHHTE----EEEEEEEEEECBH---HHHHHHHHH
T ss_pred CCCCEEEECCchH------------------H-------HHHHHHHHHHhc----CCCcEEEEEecCc---chHHHHHHH
Confidence 5799999986631 0 134677777776 9999999998864 233344455
Q ss_pred HHhCCc
Q 010971 328 LKKRDV 333 (496)
Q Consensus 328 L~~~~~ 333 (496)
+.+.++
T Consensus 147 l~~~g~ 152 (192)
T 1l3i_A 147 LRDLGF 152 (192)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 666554
No 89
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.22 E-value=2.4e-11 Score=115.92 Aligned_cols=110 Identities=18% Similarity=0.199 Sum_probs=86.5
Q ss_pred HHhc--CCCCCCeEeeccCCCchHHHHHHHHcCC-----CcEEEEEeCCHHHHHHHHHHHHHcC-----CCeEEEEecCC
Q 010971 171 VMAL--APQEKERVIDMAAAPGGKTTYIAALMKN-----TGLIYANEMKASRLKSLTANLHRMG-----VTNTIVCNYDG 238 (496)
Q Consensus 171 v~~L--~~~~g~~VLDmcAgpGgKT~~lA~l~~~-----~g~V~A~D~s~~rl~~l~~nl~r~g-----~~nv~v~~~D~ 238 (496)
..+| .+.++.+|||+|||+|..+.+++..++. .+.|+++|+++..++.+++++.+.| ..++.+...|+
T Consensus 75 ~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 154 (227)
T 1r18_A 75 LEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG 154 (227)
T ss_dssp HHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG
T ss_pred HHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc
Confidence 4444 4788999999999999999999998753 3699999999999999999999887 67899999998
Q ss_pred CCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 239 NELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 239 ~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
..... ....||+|++++++... +..+.+.| +|||+||.+...
T Consensus 155 ~~~~~--~~~~fD~I~~~~~~~~~----------------------------~~~~~~~L----kpgG~lvi~~~~ 196 (227)
T 1r18_A 155 RKGYP--PNAPYNAIHVGAAAPDT----------------------------PTELINQL----ASGGRLIVPVGP 196 (227)
T ss_dssp GGCCG--GGCSEEEEEECSCBSSC----------------------------CHHHHHTE----EEEEEEEEEESC
T ss_pred ccCCC--cCCCccEEEECCchHHH----------------------------HHHHHHHh----cCCCEEEEEEec
Confidence 76211 12679999999875321 23445555 999999987643
No 90
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.22 E-value=9e-11 Score=112.96 Aligned_cols=115 Identities=12% Similarity=0.011 Sum_probs=90.1
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~ 249 (496)
...+.+.++.+|||+|||+|..+..++... ...|+++|+++..++.+++++...|+. ++.+...|+..++. .+.
T Consensus 29 ~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~ 103 (256)
T 1nkv_A 29 GRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA---NEK 103 (256)
T ss_dssp HHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC---SSC
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc---CCC
Confidence 445677899999999999999999999886 358999999999999999999999985 79999999988763 378
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
||+|++- +++..-++ ...+|..+.++| +|||+|+.++..+.
T Consensus 104 fD~V~~~------~~~~~~~~----------------~~~~l~~~~r~L----kpgG~l~~~~~~~~ 144 (256)
T 1nkv_A 104 CDVAACV------GATWIAGG----------------FAGAEELLAQSL----KPGGIMLIGEPYWR 144 (256)
T ss_dssp EEEEEEE------SCGGGTSS----------------SHHHHHHHTTSE----EEEEEEEEEEEEET
T ss_pred CCEEEEC------CChHhcCC----------------HHHHHHHHHHHc----CCCeEEEEecCccc
Confidence 9999972 12211111 134566766665 99999999876543
No 91
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.22 E-value=8.9e-12 Score=119.55 Aligned_cols=118 Identities=19% Similarity=0.145 Sum_probs=89.8
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCC-ccccCCCCcCEEEE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-PKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~-~~~~~~~~fD~VLl 255 (496)
.++.+|||+|||+|..+..+|...++ ..|+|+|+++.++..++.++.+.|+.|+.++.+|+..+ +..+..+.||.|++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~-~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPE-QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCC-CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 46889999999999999999998653 68999999999999999999999999999999998874 33345589999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.-|.. +.+....+.+. .|..+|..+.+.| +|||+|+++|-
T Consensus 112 ~~~~p----~~~~~~~~rr~----------~~~~~l~~~~r~L----kpGG~l~i~td 151 (218)
T 3dxy_A 112 FFPDP----WHKARHNKRRI----------VQVPFAELVKSKL----QLGGVFHMATD 151 (218)
T ss_dssp ESCCC----CCSGGGGGGSS----------CSHHHHHHHHHHE----EEEEEEEEEES
T ss_pred eCCCC----ccchhhhhhhh----------hhHHHHHHHHHHc----CCCcEEEEEeC
Confidence 74321 11111111111 1234677777776 99999998874
No 92
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.22 E-value=6.8e-11 Score=119.87 Aligned_cols=113 Identities=14% Similarity=0.156 Sum_probs=87.2
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC-----------CCeEEEEecC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG-----------VTNTIVCNYD 237 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g-----------~~nv~v~~~D 237 (496)
.....+++.+|.+|||+|||+|..+..++..++..+.|+++|+++.+++.+++|+..+| ..++.+...|
T Consensus 96 ~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d 175 (336)
T 2b25_A 96 MILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 175 (336)
T ss_dssp HHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence 34556688899999999999999999999987666899999999999999999999764 3579999999
Q ss_pred CCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 238 ~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+..+...+..+.||+|++|+|... .+|..+.++| +|||+|+..+
T Consensus 176 ~~~~~~~~~~~~fD~V~~~~~~~~---------------------------~~l~~~~~~L----kpgG~lv~~~ 219 (336)
T 2b25_A 176 ISGATEDIKSLTFDAVALDMLNPH---------------------------VTLPVFYPHL----KHGGVCAVYV 219 (336)
T ss_dssp TTCCC-------EEEEEECSSSTT---------------------------TTHHHHGGGE----EEEEEEEEEE
T ss_pred hHHcccccCCCCeeEEEECCCCHH---------------------------HHHHHHHHhc----CCCcEEEEEe
Confidence 987642233467999999987321 1466667765 9999998544
No 93
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.21 E-value=7.5e-11 Score=122.36 Aligned_cols=124 Identities=9% Similarity=0.018 Sum_probs=95.0
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC---eEEEEecCCCCCcccc
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT---NTIVCNYDGNELPKVL 245 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~---nv~v~~~D~~~~~~~~ 245 (496)
+....+.+.++.+|||+|||+|..+..++...+ ...|+++|+|+..++.+++|+..+|+. ++.+...|+... +
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~---~ 288 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG---V 288 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT---C
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc---C
Confidence 455667777889999999999999999999864 479999999999999999999999976 488899998763 2
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
..+.||.|++|||......+.. ....++|..+.+.| +|||+|+++.-+..+
T Consensus 289 ~~~~fD~Ii~nppfh~~~~~~~-----------------~~~~~~l~~~~~~L----kpgG~l~iv~n~~~~ 339 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHALTD-----------------NVAWEMFHHARRCL----KINGELYIVANRHLD 339 (375)
T ss_dssp CTTCEEEEEECCCC-------C-----------------CHHHHHHHHHHHHE----EEEEEEEEEEETTSC
T ss_pred CCCCeeEEEECCCcccCcccCH-----------------HHHHHHHHHHHHhC----CCCcEEEEEEECCcC
Confidence 3468999999999643211110 11235788888876 999999997666544
No 94
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.21 E-value=1.3e-10 Score=112.70 Aligned_cols=126 Identities=12% Similarity=0.148 Sum_probs=98.8
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCC-CccccCCCCcCEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNE-LPKVLGLNTVDRV 253 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~-~~~~~~~~~fD~V 253 (496)
+.+|.+|||+|||+|..++.++... +.+.|+|+|+++..++.+++|++++|+.+ |.+..+|+.. ++. ...||.|
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~---~~~~D~I 88 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE---TDQVSVI 88 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---GGCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---CcCCCEE
Confidence 4678999999999999999988863 34789999999999999999999999985 9999999853 221 1269998
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~ 333 (496)
++ .|.| ..+-.+||..+...+ ++||+||.+.- .....|..+|..++|
T Consensus 89 vi----aG~G--------------------g~~i~~Il~~~~~~L----~~~~~lVlq~~-----~~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 89 TI----AGMG--------------------GRLIARILEEGLGKL----ANVERLILQPN-----NREDDLRIWLQDHGF 135 (225)
T ss_dssp EE----EEEC--------------------HHHHHHHHHHTGGGC----TTCCEEEEEES-----SCHHHHHHHHHHTTE
T ss_pred EE----cCCC--------------------hHHHHHHHHHHHHHh----CCCCEEEEECC-----CCHHHHHHHHHHCCC
Confidence 86 2333 122355777777765 99999999665 367788888888888
Q ss_pred EEeec
Q 010971 334 KLVPC 338 (496)
Q Consensus 334 ~lv~~ 338 (496)
.++..
T Consensus 136 ~i~~e 140 (225)
T 3kr9_A 136 QIVAE 140 (225)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87764
No 95
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.21 E-value=3.6e-11 Score=116.48 Aligned_cols=123 Identities=16% Similarity=0.109 Sum_probs=90.6
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHc---CCCe---------------------
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRM---GVTN--------------------- 230 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~-~~~g~V~A~D~s~~rl~~l~~nl~r~---g~~n--------------------- 230 (496)
..++.+|||+|||+|..+..++..+ .....|+|+|+|+..++.++.|+... |+.+
T Consensus 49 ~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (250)
T 1o9g_A 49 GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAA 128 (250)
T ss_dssp CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhh
Confidence 3467899999999999999999873 12368999999999999999999877 6543
Q ss_pred -----EE-------------EEecCCCCCccc---cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHH
Q 010971 231 -----TI-------------VCNYDGNELPKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQ 289 (496)
Q Consensus 231 -----v~-------------v~~~D~~~~~~~---~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~ 289 (496)
+. +.+.|....... .....||+|++++|+.....+..+ .....+..
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~-------------~~~~~~~~ 195 (250)
T 1o9g_A 129 QAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQ-------------VPGQPVAG 195 (250)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSC-------------CCHHHHHH
T ss_pred hhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccccccc-------------ccccHHHH
Confidence 55 888998764310 022489999999997544332210 11234566
Q ss_pred HHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 290 LILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 290 LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
++..+.++| +|||+|+++.++.
T Consensus 196 ~l~~~~~~L----kpgG~l~~~~~~~ 217 (250)
T 1o9g_A 196 LLRSLASAL----PAHAVIAVTDRSR 217 (250)
T ss_dssp HHHHHHHHS----CTTCEEEEEESSS
T ss_pred HHHHHHHhc----CCCcEEEEeCcch
Confidence 788888876 9999999976664
No 96
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.21 E-value=6.7e-11 Score=113.23 Aligned_cols=109 Identities=22% Similarity=0.307 Sum_probs=85.4
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc-ccCCCCcCE
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~-~~~~~~fD~ 252 (496)
+.+.++.+|||+|||+|..+.++++..++.+.|+++|+++..+..+.+++.+. .++.++..|+..... ....+.||+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEE
Confidence 34678999999999999999999998865689999999999999888888876 678999999987421 112368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
|++|+| .|+ ....++..+.++| +|||+|+.+.
T Consensus 151 V~~~~~---------~~~---------------~~~~~~~~~~~~L----kpgG~l~i~~ 182 (233)
T 2ipx_A 151 IFADVA---------QPD---------------QTRIVALNAHTFL----RNGGHFVISI 182 (233)
T ss_dssp EEECCC---------CTT---------------HHHHHHHHHHHHE----EEEEEEEEEE
T ss_pred EEEcCC---------Ccc---------------HHHHHHHHHHHHc----CCCeEEEEEE
Confidence 999987 111 1133566677776 9999998853
No 97
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.20 E-value=3.6e-11 Score=109.71 Aligned_cols=111 Identities=17% Similarity=0.142 Sum_probs=85.1
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
..++.+|||+|||+|..+..++.. +.+.|+++|+++..++.+++|+...|+. ++.++..|+..+.... ...||+|+
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~fD~i~ 105 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL-TGRFDLVF 105 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB-CSCEEEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh-cCCCCEEE
Confidence 567899999999999999988876 3469999999999999999999999986 6999999987642222 25799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHH--HhhhhcCCCCcEEEEEeCCCC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI--DMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~--~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+|+|+.. .. ..+++.... ++ |+|||+|++++++-.
T Consensus 106 ~~~~~~~----------------~~-------~~~~~~~l~~~~~----L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 106 LDPPYAK----------------ET-------IVATIEALAAKNL----LSEQVMVVCETDKTV 142 (177)
T ss_dssp ECCSSHH----------------HH-------HHHHHHHHHHTTC----EEEEEEEEEEEETTC
T ss_pred ECCCCCc----------------ch-------HHHHHHHHHhCCC----cCCCcEEEEEECCcc
Confidence 9998420 00 112233332 44 599999999888764
No 98
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.20 E-value=9.7e-11 Score=111.37 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=85.4
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc-CCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL-GLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~-~~~~fD~VL 254 (496)
+.+|.+|||+|||+|..+.+++..++..+.|+++|+++.+++.+.+++... .++.++..|+....... ....||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEE
Confidence 678999999999999999999998865689999999999999999999876 68999999998742111 125799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
+|+| .|+ ....++..+.++| +|||+|+++.+
T Consensus 149 ~~~~---------~~~---------------~~~~~l~~~~~~L----kpgG~l~~~~~ 179 (227)
T 1g8a_A 149 EDVA---------QPT---------------QAKILIDNAEVYL----KRGGYGMIAVK 179 (227)
T ss_dssp ECCC---------STT---------------HHHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred ECCC---------CHh---------------HHHHHHHHHHHhc----CCCCEEEEEEe
Confidence 9987 111 1123477777776 99999998743
No 99
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.20 E-value=5e-12 Score=120.14 Aligned_cols=115 Identities=12% Similarity=0.059 Sum_probs=90.6
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccC-C--
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLG-L-- 247 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~-~-- 247 (496)
.++...++.+|||+|||+|..+..++..+++.+.|+++|+++.+++.+++++...|+ .++.++.+|+......+. .
T Consensus 63 ~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~ 142 (229)
T 2avd_A 63 NLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGE 142 (229)
T ss_dssp HHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTC
T ss_pred HHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCC
Confidence 334445788999999999999999999877568999999999999999999999998 469999999865421111 1
Q ss_pred -CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 248 -NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 248 -~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+.||.|++|+|.. .+..++..+.++| +|||+|++..+.+
T Consensus 143 ~~~~D~v~~d~~~~-------------------------~~~~~l~~~~~~L----~pgG~lv~~~~~~ 182 (229)
T 2avd_A 143 AGTFDVAVVDADKE-------------------------NCSAYYERCLQLL----RPGGILAVLRVLW 182 (229)
T ss_dssp TTCEEEEEECSCST-------------------------THHHHHHHHHHHE----EEEEEEEEECCSG
T ss_pred CCCccEEEECCCHH-------------------------HHHHHHHHHHHHc----CCCeEEEEECCCc
Confidence 5799999998711 1234577777776 9999999987653
No 100
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.18 E-value=1.1e-10 Score=111.83 Aligned_cols=103 Identities=21% Similarity=0.294 Sum_probs=83.1
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCC----CccccCCCCc
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE----LPKVLGLNTV 250 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~----~~~~~~~~~f 250 (496)
.+.++.+|||+|||+|..+.+++...+ .+.|+++|+++.+++.+++++... .|+.++..|+.. ++ +. ..|
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~--~~-~~~ 144 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYAN--IV-EKV 144 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTT--TS-CCE
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccc--cC-ccE
Confidence 466899999999999999999999876 589999999999999999998766 689999999987 33 22 679
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|+|+.|.|-. + ....+|..+.++| +|||+|+.+
T Consensus 145 D~v~~~~~~~---------~---------------~~~~~l~~~~~~L----kpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVAQP---------N---------------QAEILIKNAKWFL----KKGGYGMIA 177 (230)
T ss_dssp EEEEECCCST---------T---------------HHHHHHHHHHHHE----EEEEEEEEE
T ss_pred EEEEEecCCh---------h---------------HHHHHHHHHHHhC----CCCcEEEEE
Confidence 9999876511 0 1133577777776 999999886
No 101
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.18 E-value=1.3e-10 Score=109.28 Aligned_cols=112 Identities=20% Similarity=0.227 Sum_probs=88.6
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~ 248 (496)
.....+.+.++.+|||+|||+|..+..++...+..+.|+++|+++.+++.+++++...|+.++.+...|+..... ..+
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~ 145 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE--PLA 145 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG--GGC
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC--CCC
Confidence 445556788999999999999999999999885557999999999999999999999999899999999754321 136
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.||+|+++.++... ...+.++| +|||+|+.++.+
T Consensus 146 ~fD~v~~~~~~~~~----------------------------~~~~~~~L----~pgG~lv~~~~~ 179 (215)
T 2yxe_A 146 PYDRIYTTAAGPKI----------------------------PEPLIRQL----KDGGKLLMPVGR 179 (215)
T ss_dssp CEEEEEESSBBSSC----------------------------CHHHHHTE----EEEEEEEEEESS
T ss_pred CeeEEEECCchHHH----------------------------HHHHHHHc----CCCcEEEEEECC
Confidence 89999998664311 02444555 999999987644
No 102
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.17 E-value=1.5e-11 Score=123.73 Aligned_cols=130 Identities=16% Similarity=0.110 Sum_probs=95.0
Q ss_pred cEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC
Q 010971 159 FYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG 238 (496)
Q Consensus 159 ~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~ 238 (496)
+|..+.......+..+.+.++.+|||+|||+|..|..++.. .+.|+|+|+++..++.+++++...|+.++.++++|+
T Consensus 23 ~fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~ 99 (299)
T 2h1r_A 23 HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDA 99 (299)
T ss_dssp CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----C
T ss_pred ceecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECch
Confidence 45555555556667788889999999999999999988875 368999999999999999999998988899999999
Q ss_pred CCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHH-----------HHHHHHHHHHHhhhhcCCCCcE
Q 010971 239 NELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY-----------LQKQLILAAIDMVDANSKSGGY 307 (496)
Q Consensus 239 ~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~-----------lQ~~LL~~A~~~l~~~lkpGG~ 307 (496)
..++ . ..||+|++|+|+..+. ..+..+.. .|+ ..|.+++ +++|.
T Consensus 100 ~~~~--~--~~~D~Vv~n~py~~~~--------------~~~~~ll~~~~~~~~~~l~~Q~---e~a~rll----a~~G~ 154 (299)
T 2h1r_A 100 IKTV--F--PKFDVCTANIPYKISS--------------PLIFKLISHRPLFKCAVLMFQK---EFAERML----ANVGD 154 (299)
T ss_dssp CSSC--C--CCCSEEEEECCGGGHH--------------HHHHHHHHCSSCCSEEEEEEEH---HHHHHHT----CCTTS
T ss_pred hhCC--c--ccCCEEEEcCCccccc--------------HHHHHHHhcCCccceeeehHHH---HHHHHHh----cCCCC
Confidence 8775 2 5799999999965321 11111110 011 3355555 89999
Q ss_pred EEEEeCCCC
Q 010971 308 IVYSTCSIM 316 (496)
Q Consensus 308 LVYSTCSi~ 316 (496)
..|+|||+.
T Consensus 155 ~~y~~ls~~ 163 (299)
T 2h1r_A 155 SNYSRLTIN 163 (299)
T ss_dssp TTCCHHHHH
T ss_pred cchhHHHHH
Confidence 999998874
No 103
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.17 E-value=3.1e-10 Score=110.44 Aligned_cols=127 Identities=17% Similarity=0.203 Sum_probs=100.1
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
+.+|.+|||+|||+|..++.++... ..+.|+|+|+++..++.+++|++++|+.+ +.+..+|+...... ...||.|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~--~~~~D~Iv 95 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE--ADNIDTIT 95 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc--ccccCEEE
Confidence 5679999999999999999988763 34689999999999999999999999976 99999998765421 13799987
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~ 334 (496)
+ .|.| ..+-.+||..+...+ +++|+||.+.- .+...|..+|..++|.
T Consensus 96 i----aGmG--------------------g~lI~~IL~~~~~~l----~~~~~lIlqp~-----~~~~~lr~~L~~~Gf~ 142 (230)
T 3lec_A 96 I----CGMG--------------------GRLIADILNNDIDKL----QHVKTLVLQPN-----NREDDLRKWLAANDFE 142 (230)
T ss_dssp E----EEEC--------------------HHHHHHHHHHTGGGG----TTCCEEEEEES-----SCHHHHHHHHHHTTEE
T ss_pred E----eCCc--------------------hHHHHHHHHHHHHHh----CcCCEEEEECC-----CChHHHHHHHHHCCCE
Confidence 6 2333 123345677776665 99999998763 3578888888888888
Q ss_pred Eeec
Q 010971 335 LVPC 338 (496)
Q Consensus 335 lv~~ 338 (496)
++..
T Consensus 143 i~~E 146 (230)
T 3lec_A 143 IVAE 146 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 104
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.17 E-value=4.8e-11 Score=111.21 Aligned_cols=113 Identities=15% Similarity=0.090 Sum_probs=88.2
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCc
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~f 250 (496)
..+.+.++ +|||+|||+|..+..++.. ....|+++|+++..++.++.++...|+. ++.+...|+..++ +..+.|
T Consensus 38 ~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~ 112 (219)
T 3dlc_A 38 NRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--IEDNYA 112 (219)
T ss_dssp HHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--SCTTCE
T ss_pred HhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--CCcccc
Confidence 34455666 9999999999999999987 3369999999999999999999999986 6999999998876 334789
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|+|++..... .-+ ....+|..+.++| +|||+|++++...
T Consensus 113 D~v~~~~~l~------~~~----------------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 113 DLIVSRGSVF------FWE----------------DVATAFREIYRIL----KSGGKTYIGGGFG 151 (219)
T ss_dssp EEEEEESCGG------GCS----------------CHHHHHHHHHHHE----EEEEEEEEEECCS
T ss_pred cEEEECchHh------hcc----------------CHHHHHHHHHHhC----CCCCEEEEEeccC
Confidence 9999854311 101 1234677777776 9999999986443
No 105
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.17 E-value=3e-10 Score=112.86 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=92.6
Q ss_pred HHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCC
Q 010971 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~ 248 (496)
....+.+.+|.+|||+|||+|..+..++...+ ..|+++|+|+..++.+++++...|+. ++.+...|+..+ .+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~ 136 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-----DE 136 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-----CC
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-----CC
Confidence 34556778999999999999999999999864 68999999999999999999999997 699999998765 37
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
.||+|++.. ++..-|+........ ....+|..+.++| +|||+|+..+.+..
T Consensus 137 ~fD~v~~~~------~~~~~~d~~~~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~ 187 (302)
T 3hem_A 137 PVDRIVSLG------AFEHFADGAGDAGFE-------RYDTFFKKFYNLT----PDDGRMLLHTITIP 187 (302)
T ss_dssp CCSEEEEES------CGGGTTCCSSCCCTT-------HHHHHHHHHHHSS----CTTCEEEEEEEECC
T ss_pred CccEEEEcc------hHHhcCccccccchh-------HHHHHHHHHHHhc----CCCcEEEEEEEecc
Confidence 899999742 222111110000001 1234677777775 99999999888754
No 106
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.17 E-value=4e-10 Score=106.21 Aligned_cols=117 Identities=15% Similarity=0.085 Sum_probs=87.2
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-----eEEEEecCCCCCcccc
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKVL 245 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-----nv~v~~~D~~~~~~~~ 245 (496)
...+...++.+|||+|||+|..+..++...+ ...|+++|+++..++.+++++...++. ++.++..|+...+..
T Consensus 22 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 99 (217)
T 3jwh_A 22 VAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR- 99 (217)
T ss_dssp HHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG-
T ss_pred HHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc-
Confidence 3444556789999999999999999988643 369999999999999999999988876 699999998665532
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+.||+|++... +. .....+ ...+|..+.++| +|||.|+.+.+.
T Consensus 100 -~~~fD~v~~~~~------l~-------~~~~~~-------~~~~l~~~~~~L----kpgG~li~~~~~ 143 (217)
T 3jwh_A 100 -FHGYDAATVIEV------IE-------HLDLSR-------LGAFERVLFEFA----QPKIVIVTTPNI 143 (217)
T ss_dssp -GCSCSEEEEESC------GG-------GCCHHH-------HHHHHHHHHTTT----CCSEEEEEEEBH
T ss_pred -CCCcCEEeeHHH------HH-------cCCHHH-------HHHHHHHHHHHc----CCCEEEEEccCc
Confidence 368999997422 11 111111 244677777765 999988877664
No 107
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.17 E-value=7.8e-11 Score=108.86 Aligned_cols=114 Identities=20% Similarity=0.231 Sum_probs=83.0
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCC--------cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEE-ecCCCCCcc---
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNT--------GLIYANEMKASRLKSLTANLHRMGVTNTIVC-NYDGNELPK--- 243 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~--------g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~-~~D~~~~~~--- 243 (496)
+.+|.+|||+|||+|..+.+++..++.. +.|+++|+++. ..+.++.++ ..|....+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~-----------~~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI-----------FPLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC-----------CCCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc-----------ccCCCCeEEEeccCCCHHHHHH
Confidence 5689999999999999999999998653 79999999983 234567888 888766431
Q ss_pred ---ccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 244 ---VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 244 ---~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.+....||+|++|.++..+|... .+......++..+|..+.++| +|||+|+.+++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~~~~L----kpgG~lv~~~~~~ 148 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRD-----------LDHDRLISLCLTLLSVTPDIL----QPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHH-----------HHHHHHHHHHHHHHHHHHHHE----EEEEEEEEEECCS
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcc-----------cCHHHHHHHHHHHHHHHHHHh----cCCCEEEEEecCC
Confidence 12235799999998766555321 112223344567788888886 9999999887643
No 108
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.16 E-value=1.2e-10 Score=114.89 Aligned_cols=113 Identities=14% Similarity=0.157 Sum_probs=88.0
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCcCEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
+++|.+|||+|||+|..+..|+...... ..|+|+|+|+.+++.+++++...+.. +|.++++|+..++ + ..||.|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~--~--~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA--I--ENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC--C--CSEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc--c--cccccc
Confidence 5789999999999999999999887543 48999999999999999999998875 6999999998876 2 579999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
++.- ++. .....+ ...+|.++.+.| +|||+|+.+.-...
T Consensus 144 ~~~~------~l~-------~~~~~~-------~~~~l~~i~~~L----kpGG~lii~e~~~~ 182 (261)
T 4gek_A 144 VLNF------TLQ-------FLEPSE-------RQALLDKIYQGL----NPGGALVLSEKFSF 182 (261)
T ss_dssp EEES------CGG-------GSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEBCC
T ss_pred eeee------eee-------ecCchh-------HhHHHHHHHHHc----CCCcEEEEEeccCC
Confidence 8721 110 011111 134677888876 99999999876543
No 109
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.15 E-value=5.2e-11 Score=125.92 Aligned_cols=163 Identities=19% Similarity=0.156 Sum_probs=114.3
Q ss_pred cccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcC------------CCcEEEEEeCCHHHHHHHHHHHH
Q 010971 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMK------------NTGLIYANEMKASRLKSLTANLH 224 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~------------~~g~V~A~D~s~~rl~~l~~nl~ 224 (496)
.|.|+--..-+.+.+..+.+.++.+|||.|||+|+..+.++..+. ....|+|+|+++..+..++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 344433223344666778889999999999999999999887752 12579999999999999999999
Q ss_pred HcCCC--eEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCC---chhhccCCHHHHHHHHHHHHHHHHHHHHhhh
Q 010971 225 RMGVT--NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKD---ESVKTSKSLEDIQKCSYLQKQLILAAIDMVD 299 (496)
Q Consensus 225 r~g~~--nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~---p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~ 299 (496)
..|+. ++.+.++|+...+. ...||+|+++||+++....... .+..+.. ...+..+|.+++++|
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~---~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~--------~~~~~~fl~~~~~~L- 297 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEP---STLVDVILANPPFGTRPAGSVDINRPDFYVET--------KNNQLNFLQHMMLML- 297 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCC---SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCC--------SCHHHHHHHHHHHHE-
T ss_pred HhCCCcCCCCEeeCCCCCCcc---cCCcCEEEECCCCCCcccccchhhHhhcCCCC--------cchHHHHHHHHHHHh-
Confidence 98986 67788899876643 2489999999999986543221 1111111 112456788888886
Q ss_pred hcCCCCcEEEEEeCC--CCCcCCH-HHHHHHHHhCCcE
Q 010971 300 ANSKSGGYIVYSTCS--IMVTENE-AVIDYALKKRDVK 334 (496)
Q Consensus 300 ~~lkpGG~LVYSTCS--i~~eENE-~vV~~~L~~~~~~ 334 (496)
+|||++++.++. ++....+ .+..+++++..+.
T Consensus 298 ---k~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~~l~ 332 (445)
T 2okc_A 298 ---KTGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNLH 332 (445)
T ss_dssp ---EEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHEEEE
T ss_pred ---ccCCEEEEEECCcccccCcHHHHHHHHHHhcCcEE
Confidence 999999988865 2222223 3445666665444
No 110
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.15 E-value=1.2e-10 Score=105.45 Aligned_cols=127 Identities=18% Similarity=0.247 Sum_probs=94.3
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~ 248 (496)
.....+.+.++.+|||+|||+|..+..++. ....|+++|+++..++.+++++..+|+.++.+...|+.. + +..+
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~--~~~~ 99 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V--LDKL 99 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H--GGGC
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c--ccCC
Confidence 344556778899999999999999998887 447999999999999999999999999889999999865 2 2236
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHH
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYAL 328 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L 328 (496)
.||.|+++.| .+ ...+|..+.+ + |||++++++|... +-..+...+
T Consensus 100 ~~D~i~~~~~--------~~------------------~~~~l~~~~~-----~-~gG~l~~~~~~~~---~~~~~~~~l 144 (183)
T 2yxd_A 100 EFNKAFIGGT--------KN------------------IEKIIEILDK-----K-KINHIVANTIVLE---NAAKIINEF 144 (183)
T ss_dssp CCSEEEECSC--------SC------------------HHHHHHHHHH-----T-TCCEEEEEESCHH---HHHHHHHHH
T ss_pred CCcEEEECCc--------cc------------------HHHHHHHHhh-----C-CCCEEEEEecccc---cHHHHHHHH
Confidence 8999999876 00 1234554444 2 9999999987642 223344455
Q ss_pred HhCCcEEe
Q 010971 329 KKRDVKLV 336 (496)
Q Consensus 329 ~~~~~~lv 336 (496)
++.++.+.
T Consensus 145 ~~~g~~~~ 152 (183)
T 2yxd_A 145 ESRGYNVD 152 (183)
T ss_dssp HHTTCEEE
T ss_pred HHcCCeEE
Confidence 66654443
No 111
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.15 E-value=3.3e-11 Score=108.41 Aligned_cols=108 Identities=15% Similarity=0.106 Sum_probs=82.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--CCCCcCEEEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVDRVLL 255 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--~~~~fD~VLl 255 (496)
++.+|||+|||+|..+..++... ..|+++|+++..++.++.|+...++ ++.+++.|+..+.... ....||+|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 78899999999999999998863 2399999999999999999999998 8899999987642111 1237999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHH--HHhhhhcCCCCcEEEEEeCCCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA--IDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A--~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
|+|+. +.. + .++... .++ |+|||++++++++...
T Consensus 117 ~~~~~--~~~---~-------------------~~~~~~~~~~~----L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 117 APPYA--MDL---A-------------------ALFGELLASGL----VEAGGLYVLQHPKDLY 152 (171)
T ss_dssp CCCTT--SCT---T-------------------HHHHHHHHHTC----EEEEEEEEEEEETTSC
T ss_pred CCCCc--hhH---H-------------------HHHHHHHhhcc----cCCCcEEEEEeCCccC
Confidence 99965 210 0 112222 244 4999999998887654
No 112
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.14 E-value=3.8e-10 Score=110.75 Aligned_cols=128 Identities=11% Similarity=0.139 Sum_probs=99.9
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~V 253 (496)
-+.+|.+|||+|||+|..++.++... ..+.|+|+|+++..++.+++|++++|+.+ |.+..+|+...... ...||.|
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--~~~~D~I 94 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--KDAIDTI 94 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEE
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc--cccccEE
Confidence 35689999999999999999988863 34689999999999999999999999976 99999998765421 1359998
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~ 333 (496)
++ .|.| ..+-.+||..+...+ +++|+||.+.- .....|..+|..++|
T Consensus 95 vi----agmG--------------------g~lI~~IL~~~~~~L----~~~~~lIlq~~-----~~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 95 VI----AGMG--------------------GTLIRTILEEGAAKL----AGVTKLILQPN-----IAAWQLREWSEQNNW 141 (244)
T ss_dssp EE----EEEC--------------------HHHHHHHHHHTGGGG----TTCCEEEEEES-----SCHHHHHHHHHHHTE
T ss_pred EE----eCCc--------------------hHHHHHHHHHHHHHh----CCCCEEEEEcC-----CChHHHHHHHHHCCC
Confidence 86 2333 122355777777765 89999998763 367788888888888
Q ss_pred EEeec
Q 010971 334 KLVPC 338 (496)
Q Consensus 334 ~lv~~ 338 (496)
.++..
T Consensus 142 ~i~~E 146 (244)
T 3gnl_A 142 LITSE 146 (244)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 113
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.14 E-value=1.3e-10 Score=111.62 Aligned_cols=121 Identities=20% Similarity=0.250 Sum_probs=91.6
Q ss_pred cccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEec
Q 010971 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY 236 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~ 236 (496)
.|..+.+..........+.+.++.+|||+|||+|..+..++...+ +.|+++|+++..++.+++++..+|+.++.+...
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 147 (235)
T 1jg1_A 70 AGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILG 147 (235)
T ss_dssp TTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 444544443334445666788999999999999999999999875 789999999999999999999999989999999
Q ss_pred CCCC-CccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 237 DGNE-LPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 237 D~~~-~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
|+.. ++. ...||+|+++.++... ...+.+.| +|||+|+.++-.
T Consensus 148 d~~~~~~~---~~~fD~Ii~~~~~~~~----------------------------~~~~~~~L----~pgG~lvi~~~~ 191 (235)
T 1jg1_A 148 DGSKGFPP---KAPYDVIIVTAGAPKI----------------------------PEPLIEQL----KIGGKLIIPVGS 191 (235)
T ss_dssp CGGGCCGG---GCCEEEEEECSBBSSC----------------------------CHHHHHTE----EEEEEEEEEECS
T ss_pred CcccCCCC---CCCccEEEECCcHHHH----------------------------HHHHHHhc----CCCcEEEEEEec
Confidence 9722 221 2459999998764221 11334554 999999987654
No 114
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.14 E-value=6.5e-10 Score=104.35 Aligned_cols=114 Identities=14% Similarity=0.191 Sum_probs=86.7
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~ 248 (496)
+....+...++.+|||+|||+|..+..++... ..|+++|+++..++.+++++...+ ++.+...|+..++ ..+
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~---~~~ 113 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFS---TAE 113 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCC---CSC
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCC---CCC
Confidence 44455667788999999999999999888763 589999999999999999987754 7999999998886 247
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.||+|++.. ++..-+ ++.. ...+|..+.++| +|||+|+++|.
T Consensus 114 ~fD~v~~~~------~l~~~~------~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~ 155 (216)
T 3ofk_A 114 LFDLIVVAE------VLYYLE------DMTQ-------MRTAIDNMVKML----APGGHLVFGSA 155 (216)
T ss_dssp CEEEEEEES------CGGGSS------SHHH-------HHHHHHHHHHTE----EEEEEEEEEEE
T ss_pred CccEEEEcc------HHHhCC------CHHH-------HHHHHHHHHHHc----CCCCEEEEEec
Confidence 899999842 221111 1111 234677777776 99999999873
No 115
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.14 E-value=3.4e-10 Score=108.40 Aligned_cols=109 Identities=13% Similarity=0.215 Sum_probs=88.4
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~ 249 (496)
...+.+.+|.+|||+|||+|..+..++.. .+.|+++|+++.+++.+++++..+|+ .++.+...|+.... .....
T Consensus 84 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 158 (248)
T 2yvl_A 84 ALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE--VPEGI 158 (248)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC--CCTTC
T ss_pred HHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc--cCCCc
Confidence 34456678999999999999999999987 47999999999999999999999998 67999999987643 12368
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
||+|++|+| +| ..+|..+.++| +|||+|++.+.+.
T Consensus 159 ~D~v~~~~~---------~~------------------~~~l~~~~~~L----~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 159 FHAAFVDVR---------EP------------------WHYLEKVHKSL----MEGAPVGFLLPTA 193 (248)
T ss_dssp BSEEEECSS---------CG------------------GGGHHHHHHHB----CTTCEEEEEESSH
T ss_pred ccEEEECCc---------CH------------------HHHHHHHHHHc----CCCCEEEEEeCCH
Confidence 999999877 11 12466677776 9999999877654
No 116
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.13 E-value=2.1e-10 Score=119.33 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=92.5
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. ...|+++|+|+..++.+++|+..+++. +.++..|+..++.. .+.||.|++|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~~--~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALTE--EARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSCT--TCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhcccc--CCCeEEEEEC
Confidence 47889999999999999999886 359999999999999999999999986 78889999876532 3689999999
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
+|+...+... ......++..+.+.| +|||+|+++++...+
T Consensus 306 pp~~~~~~~~-----------------~~~~~~~l~~~~~~L----kpGG~l~iv~n~~l~ 345 (381)
T 3dmg_A 306 PPFHVGGAVI-----------------LDVAQAFVNVAAARL----RPGGVFFLVSNPFLK 345 (381)
T ss_dssp CCCCTTCSSC-----------------CHHHHHHHHHHHHHE----EEEEEEEEEECTTSC
T ss_pred Cchhhccccc-----------------HHHHHHHHHHHHHhc----CcCcEEEEEEcCCCC
Confidence 9986433211 122346788888886 999999999888754
No 117
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.13 E-value=4.6e-11 Score=120.61 Aligned_cols=90 Identities=18% Similarity=0.259 Sum_probs=77.9
Q ss_pred HHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccC---
Q 010971 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG--- 246 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~--- 246 (496)
++..|.+++|.+|||+|||+|+.|.+|+..++ .+.|+|+|+|+..++.+++|+..+| .++.++++|+..++..+.
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~g 95 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTLG 95 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHTT
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhcC
Confidence 34667888999999999999999999999875 5899999999999999999999998 789999999887753321
Q ss_pred CCCcCEEEECCCCCC
Q 010971 247 LNTVDRVLLDAPCSG 261 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg 261 (496)
...||.|++|+|||.
T Consensus 96 ~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 96 IEKVDGILMDLGVST 110 (301)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCCCEEEEcCccch
Confidence 147999999999984
No 118
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.13 E-value=1.5e-10 Score=103.47 Aligned_cols=126 Identities=21% Similarity=0.228 Sum_probs=91.1
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc------ccCCCC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK------VLGLNT 249 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~------~~~~~~ 249 (496)
+.++.+|||+|||+|..+..++..++..+.|+++|+++ .+. +.++.+...|+..++. .+..+.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhccCCCCc
Confidence 67899999999999999999999875557999999998 542 2678888999887541 133468
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHH
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALK 329 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~ 329 (496)
||+|++|+|+...|.. ..+.......+..+|..+.++| +|||.++.++.. .++...+...+.
T Consensus 89 ~D~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~~L----~~gG~l~~~~~~---~~~~~~~~~~~~ 150 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTP-----------AVDIPRAMYLVELALEMCRDVL----APGGSFVVKVFQ---GEGFDEYLREIR 150 (180)
T ss_dssp EEEEEECCCCCCCSCH-----------HHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEEEES---STTHHHHHHHHH
T ss_pred eeEEEECCCccccCCC-----------ccchHHHHHHHHHHHHHHHHHc----CCCcEEEEEEec---CCcHHHHHHHHH
Confidence 9999999998776631 1122223344577888888886 999999986643 344444444444
Q ss_pred h
Q 010971 330 K 330 (496)
Q Consensus 330 ~ 330 (496)
.
T Consensus 151 ~ 151 (180)
T 1ej0_A 151 S 151 (180)
T ss_dssp H
T ss_pred H
Confidence 4
No 119
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.13 E-value=3.1e-10 Score=107.84 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=87.3
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.++.+|||+|||+|..+..++...+ ...|+++|+++..++.+++++...+ ++.++..|+..++.. +.||+|++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~---~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE---EKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC---SCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC---CCceEEEE
Confidence 56789999999999999999999874 4799999999999999999987766 899999999887632 78999998
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
... +. ...... ...+|..+.++| +|||+|+.++....
T Consensus 116 ~~~------l~-------~~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 116 ALS------IH-------HLEDED-------KKELYKRSYSIL----KESGIFINADLVHG 152 (234)
T ss_dssp ESC------GG-------GSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEECBC
T ss_pred eCc------cc-------cCCHHH-------HHHHHHHHHHhc----CCCcEEEEEEecCC
Confidence 543 11 111111 135677788876 99999999887653
No 120
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.12 E-value=2e-09 Score=98.21 Aligned_cols=129 Identities=7% Similarity=0.011 Sum_probs=94.7
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.++.+|||+|||+|..+..++.. ...|+++|+++..++.++.++ .++.+...|+..++ +..+.||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~--~~~~~~D~i~~ 113 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQ--ISETDFDLIVS 113 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSC--CCCCCEEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCC--CCCCceeEEEE
Confidence 457899999999999999998876 368999999999999998876 34778888988765 23478999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEE
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~l 335 (496)
++++-. ..+..+ ...+|..+.++| +|||++++++..... -....+..++...++++
T Consensus 114 ~~~~~~------------~~~~~~-------~~~~l~~~~~~l----~~~G~l~~~~~~~~~-~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 114 AGNVMG------------FLAEDG-------REPALANIHRAL----GADGRAVIGFGAGRG-WVFGDFLEVAERVGLEL 169 (195)
T ss_dssp CCCCGG------------GSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEETTSS-CCHHHHHHHHHHHTEEE
T ss_pred CCcHHh------------hcChHH-------HHHHHHHHHHHh----CCCCEEEEEeCCCCC-cCHHHHHHHHHHcCCEE
Confidence 754311 111111 245677777776 999999987765432 34556666777778777
Q ss_pred eec
Q 010971 336 VPC 338 (496)
Q Consensus 336 v~~ 338 (496)
+..
T Consensus 170 ~~~ 172 (195)
T 3cgg_A 170 ENA 172 (195)
T ss_dssp EEE
T ss_pred eee
Confidence 654
No 121
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.12 E-value=1.7e-11 Score=118.89 Aligned_cols=130 Identities=13% Similarity=0.151 Sum_probs=93.4
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHH---cCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCC---cccc
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAAL---MKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL---PKVL 245 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l---~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~---~~~~ 245 (496)
.++...++.+|||+|||+|..|..|+.+ +.+.+.|+++|+++.+++.++ .++ .++.++.+|+..+ +. .
T Consensus 75 ~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~~~l~~-~ 148 (236)
T 2bm8_A 75 DMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDLTTFEH-L 148 (236)
T ss_dssp HHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCSGGGGG-G
T ss_pred HHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhHHHHHh-h
Confidence 3444456789999999999999999998 455689999999999887665 222 5799999999875 32 2
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHH-hhhhcCCCCcEEEEEeC-CCCCcCCHHH
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAID-MVDANSKSGGYIVYSTC-SIMVTENEAV 323 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~-~l~~~lkpGG~LVYSTC-Si~~eENE~v 323 (496)
....||+|++|+. +. + ...+|..+.+ .| +|||+||+... .+.+..+.+.
T Consensus 149 ~~~~fD~I~~d~~---------~~---------~-------~~~~l~~~~r~~L----kpGG~lv~~d~~~~~~~~~~~~ 199 (236)
T 2bm8_A 149 REMAHPLIFIDNA---------HA---------N-------TFNIMKWAVDHLL----EEGDYFIIEDMIPYWYRYAPQL 199 (236)
T ss_dssp SSSCSSEEEEESS---------CS---------S-------HHHHHHHHHHHTC----CTTCEEEECSCHHHHHHHCHHH
T ss_pred ccCCCCEEEECCc---------hH---------h-------HHHHHHHHHHhhC----CCCCEEEEEeCcccccccCHHH
Confidence 2237999999875 10 0 1235666664 65 99999999753 3444556677
Q ss_pred HHHHHHhC--CcEEe
Q 010971 324 IDYALKKR--DVKLV 336 (496)
Q Consensus 324 V~~~L~~~--~~~lv 336 (496)
+..+++.. ++.++
T Consensus 200 ~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 200 FSEYLGAFRDVLSMD 214 (236)
T ss_dssp HHHHHHTTTTTEEEE
T ss_pred HHHHHHhCcccEEEc
Confidence 88888775 45554
No 122
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.12 E-value=1.2e-09 Score=106.32 Aligned_cols=115 Identities=13% Similarity=0.216 Sum_probs=90.4
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~ 249 (496)
...+.+.++.+|||+|||+|..+..++... .+.|+++|+|+..++.+++++...|+. ++.+...|+..++ +..+.
T Consensus 54 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 129 (273)
T 3bus_A 54 IALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP--FEDAS 129 (273)
T ss_dssp HHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--SCTTC
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC--CCCCC
Confidence 344567889999999999999999999875 379999999999999999999999986 5999999998876 33478
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
||+|++... +..-++ ...+|..+.++| +|||+|+.++...
T Consensus 130 fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L----~pgG~l~i~~~~~ 169 (273)
T 3bus_A 130 FDAVWALES------LHHMPD----------------RGRALREMARVL----RPGGTVAIADFVL 169 (273)
T ss_dssp EEEEEEESC------TTTSSC----------------HHHHHHHHHTTE----EEEEEEEEEEEEE
T ss_pred ccEEEEech------hhhCCC----------------HHHHHHHHHHHc----CCCeEEEEEEeec
Confidence 999997322 211111 134677777776 9999999988654
No 123
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.12 E-value=3.1e-11 Score=116.15 Aligned_cols=119 Identities=14% Similarity=0.185 Sum_probs=92.2
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCC-ccc--
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNEL-PKV-- 244 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~-~~~-- 244 (496)
+...++...++.+|||+|||+|..+..++..++..+.|+++|+++..++.+++++...|+.+ +.+...|+... +..
T Consensus 51 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 130 (239)
T 2hnk_A 51 FLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLID 130 (239)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHh
Confidence 44444555678999999999999999999998756899999999999999999999999976 99999987653 211
Q ss_pred ----------cC-C-CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 245 ----------LG-L-NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 245 ----------~~-~-~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+. . +.||+|++|+.. .. ...+|..+.++| +|||+||+.+
T Consensus 131 ~~~~~~~~~~f~~~~~~fD~I~~~~~~------------------~~-------~~~~l~~~~~~L----~pgG~lv~~~ 181 (239)
T 2hnk_A 131 SKSAPSWASDFAFGPSSIDLFFLDADK------------------EN-------YPNYYPLILKLL----KPGGLLIADN 181 (239)
T ss_dssp CSSCCGGGTTTCCSTTCEEEEEECSCG------------------GG-------HHHHHHHHHHHE----EEEEEEEEEC
T ss_pred hcccccccccccCCCCCcCEEEEeCCH------------------HH-------HHHHHHHHHHHc----CCCeEEEEEc
Confidence 11 1 679999998530 01 124577777776 9999999988
Q ss_pred CCCC
Q 010971 313 CSIM 316 (496)
Q Consensus 313 CSi~ 316 (496)
+.+.
T Consensus 182 ~~~~ 185 (239)
T 2hnk_A 182 VLWD 185 (239)
T ss_dssp SSGG
T ss_pred cccC
Confidence 7653
No 124
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.12 E-value=1.7e-10 Score=111.08 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=87.6
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcC
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
..+.+.++.+|||+|||+|..+.+++... ...|+++|+++..++.+++++... .++.+...|+..++ +..+.||
T Consensus 49 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~--~~~~~fD 122 (266)
T 3ujc_A 49 SDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKE--FPENNFD 122 (266)
T ss_dssp TTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCC--CCTTCEE
T ss_pred HhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCC--CCCCcEE
Confidence 34467789999999999999999999976 369999999999999998887665 67999999998875 3347899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+|++... +. ..+.. ....+|..+.++| +|||+|++++.+.
T Consensus 123 ~v~~~~~------l~-------~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 123 LIYSRDA------IL-------ALSLE-------NKNKLFQKCYKWL----KPTGTLLITDYCA 162 (266)
T ss_dssp EEEEESC------GG-------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEEE
T ss_pred EEeHHHH------HH-------hcChH-------HHHHHHHHHHHHc----CCCCEEEEEEecc
Confidence 9997422 11 11111 2245677777776 9999999987644
No 125
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.11 E-value=2.3e-10 Score=108.72 Aligned_cols=120 Identities=16% Similarity=0.162 Sum_probs=90.1
Q ss_pred cccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEec
Q 010971 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY 236 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~ 236 (496)
.|..+.+..........+.+.++.+|||+|||+|..+..++... +.|+++|+++..++.+++++...| ++.+...
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~ 123 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILG 123 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEES
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEEC
Confidence 34444443333344556678899999999999999999999874 689999999999999999998887 8889999
Q ss_pred CCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 237 DGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 237 D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|+..... ..+.||+|+++.++... ...+.+.| +|||+|++++.+-
T Consensus 124 d~~~~~~--~~~~fD~v~~~~~~~~~----------------------------~~~~~~~L----~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 124 DGTLGYE--EEKPYDRVVVWATAPTL----------------------------LCKPYEQL----KEGGIMILPIGVG 168 (231)
T ss_dssp CGGGCCG--GGCCEEEEEESSBBSSC----------------------------CHHHHHTE----EEEEEEEEEECSS
T ss_pred Ccccccc--cCCCccEEEECCcHHHH----------------------------HHHHHHHc----CCCcEEEEEEcCC
Confidence 9876221 23689999998765321 01244454 9999999987653
No 126
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.11 E-value=4.5e-10 Score=118.46 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=70.2
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.++.+|||+|||+|..++.+|.. ...|+++|+++..++.+++|+..+|+. +.+..+|+..+.. ..||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~----~~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV----KGFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC----TTCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc----cCCCEEEE
Confidence 567899999999999999999875 358999999999999999999999998 9999999987642 27999999
Q ss_pred CCCCCCC
Q 010971 256 DAPCSGT 262 (496)
Q Consensus 256 DaPCSg~ 262 (496)
|||++|.
T Consensus 360 dPPr~g~ 366 (425)
T 2jjq_A 360 DPPRAGL 366 (425)
T ss_dssp CCCTTCS
T ss_pred cCCccch
Confidence 9998765
No 127
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.10 E-value=6.7e-11 Score=114.36 Aligned_cols=113 Identities=13% Similarity=0.082 Sum_probs=85.8
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..+|.+|||+|||+|..+.+|++..+ ..|+++|+|+..++.++++....+. ++.++.+|+..+...+..+.||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~FD~i~~ 134 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhcccccccCCceEEE
Confidence 46899999999999999998887532 5899999999999999999988775 57778888876554455678999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
|+..+..... . ......++.++.++| ||||+|+|++
T Consensus 135 D~~~~~~~~~----------~-------~~~~~~~~~e~~rvL----kPGG~l~f~~ 170 (236)
T 3orh_A 135 DTYPLSEETW----------H-------THQFNFIKNHAFRLL----KPGGVLTYCN 170 (236)
T ss_dssp CCCCCBGGGT----------T-------THHHHHHHHTHHHHE----EEEEEEEECC
T ss_pred eeeecccchh----------h-------hcchhhhhhhhhhee----CCCCEEEEEe
Confidence 9764332211 0 012234677777776 9999999854
No 128
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.10 E-value=1.4e-10 Score=112.51 Aligned_cols=120 Identities=15% Similarity=0.218 Sum_probs=86.4
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH------cCCCeEEEEecCCCC-CccccCCC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR------MGVTNTIVCNYDGNE-LPKVLGLN 248 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r------~g~~nv~v~~~D~~~-~~~~~~~~ 248 (496)
..++.+|||+|||+|..+..||...+ ...|+|+|+++.++..+++++.. .+..|+.++.+|+.. ++..+..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 35678999999999999999998764 46899999999999999998875 467899999999987 55444557
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.||.|++.-|. |..+.. ....+ ..+..+|..+.++| +|||.|+++|+.
T Consensus 123 ~~D~v~~~~~d---------p~~k~~---h~krr--~~~~~~l~~~~~~L----kpGG~l~~~td~ 170 (235)
T 3ckk_A 123 QLTKMFFLFPD---------PHFKRT---KHKWR--IISPTLLAEYAYVL----RVGGLVYTITDV 170 (235)
T ss_dssp CEEEEEEESCC-------------------------CCCHHHHHHHHHHE----EEEEEEEEEESC
T ss_pred CeeEEEEeCCC---------chhhhh---hhhhh--hhhHHHHHHHHHHC----CCCCEEEEEeCC
Confidence 89999986541 211110 00000 01245677777776 999999998863
No 129
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.09 E-value=4.7e-10 Score=109.47 Aligned_cols=109 Identities=16% Similarity=0.204 Sum_probs=87.4
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
.+.++.+|||+|||+|..+..++...+ .+.|+++|+++..++.+++++...|+.++.+...|+..++ +..+.||+|+
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v~ 110 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP--FEDSSFDHIF 110 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC--SCTTCEEEEE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC--CCCCCeeEEE
Confidence 456899999999999999999998854 4799999999999999999999999999999999998776 3347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+... +..-+ .+ ..+|..+.++| +|||+|+..+
T Consensus 111 ~~~~------l~~~~------~~----------~~~l~~~~~~L----~pgG~l~~~~ 142 (276)
T 3mgg_A 111 VCFV------LEHLQ------SP----------EEALKSLKKVL----KPGGTITVIE 142 (276)
T ss_dssp EESC------GGGCS------CH----------HHHHHHHHHHE----EEEEEEEEEE
T ss_pred Eech------hhhcC------CH----------HHHHHHHHHHc----CCCcEEEEEE
Confidence 8432 11111 11 24567777776 9999999986
No 130
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.08 E-value=3.9e-10 Score=106.27 Aligned_cols=116 Identities=13% Similarity=0.072 Sum_probs=85.9
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-----eEEEEecCCCCCccccC
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKVLG 246 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-----nv~v~~~D~~~~~~~~~ 246 (496)
..+...++.+|||+|||+|..+..++...+ ...|+++|+++..++.+++++...++. ++.+...|+..++..
T Consensus 23 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 99 (219)
T 3jwg_A 23 AVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR-- 99 (219)
T ss_dssp HHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG--
T ss_pred HHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc--
Confidence 444456789999999999999999887643 369999999999999999999888775 789999998665532
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+.||+|++.. ++. .....+ ...+|..+.+.| +|||.|+.+.++
T Consensus 100 ~~~fD~V~~~~------~l~-------~~~~~~-------~~~~l~~~~~~L----kpgG~~i~~~~~ 143 (219)
T 3jwg_A 100 FSGYDAATVIE------VIE-------HLDENR-------LQAFEKVLFEFT----RPQTVIVSTPNK 143 (219)
T ss_dssp GTTCSEEEEES------CGG-------GCCHHH-------HHHHHHHHHTTT----CCSEEEEEEEBG
T ss_pred cCCCCEEEEHH------HHH-------hCCHHH-------HHHHHHHHHHhh----CCCEEEEEccch
Confidence 37899999732 111 111111 234677777765 999987776654
No 131
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.08 E-value=8.6e-10 Score=101.50 Aligned_cols=114 Identities=18% Similarity=0.109 Sum_probs=88.3
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~ 248 (496)
.....+...++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++...++.++.+...|+..++. .+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF---DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC---CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC---CC
Confidence 4455667778889999999999999998886 35899999999999999999999999889999999887653 37
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.||+|++... +.. ....+ ...+|..+.++| +|||+|++.+
T Consensus 97 ~~D~v~~~~~------l~~-------~~~~~-------~~~~l~~~~~~L----~~gG~l~~~~ 136 (199)
T 2xvm_A 97 QYDFILSTVV------LMF-------LEAKT-------IPGLIANMQRCT----KPGGYNLIVA 136 (199)
T ss_dssp CEEEEEEESC------GGG-------SCGGG-------HHHHHHHHHHTE----EEEEEEEEEE
T ss_pred CceEEEEcch------hhh-------CCHHH-------HHHHHHHHHHhc----CCCeEEEEEE
Confidence 8999997543 110 11111 244677777776 9999987654
No 132
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.08 E-value=1.5e-09 Score=107.19 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=88.6
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+.++.+|||+|||+|..+..++...+ ..|+++|+++..++.+++++...|+. ++.+...|+..++ +..+.||+|
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v 154 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--CEDNSYDFI 154 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC--CCCCCEeEE
Confidence 667899999999999999999998763 58999999999999999999999985 6999999998876 334789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
++.- ++..-++ ...+|..+.++| +|||+|+.++...
T Consensus 155 ~~~~------~l~~~~~----------------~~~~l~~~~~~L----kpgG~l~~~~~~~ 190 (297)
T 2o57_A 155 WSQD------AFLHSPD----------------KLKVFQECARVL----KPRGVMAITDPMK 190 (297)
T ss_dssp EEES------CGGGCSC----------------HHHHHHHHHHHE----EEEEEEEEEEEEE
T ss_pred Eecc------hhhhcCC----------------HHHHHHHHHHHc----CCCeEEEEEEecc
Confidence 9732 1211111 134677777776 9999999987643
No 133
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.08 E-value=9.3e-11 Score=116.96 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=78.5
Q ss_pred EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCC
Q 010971 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDG 238 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~ 238 (496)
|..+.......+..+.+.++.+|||+|||+|..|..++... +.|+|+|+|+..+..+++++...|. .++.++++|+
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 44444334455667788899999999999999999999873 5899999999999999999988887 5799999999
Q ss_pred CCCccccCCCCcCEEEECCCCCC
Q 010971 239 NELPKVLGLNTVDRVLLDAPCSG 261 (496)
Q Consensus 239 ~~~~~~~~~~~fD~VLlDaPCSg 261 (496)
..++ + ..||.|+++.|+..
T Consensus 87 ~~~~--~--~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 87 LKTD--L--PFFDTCVANLPYQI 105 (285)
T ss_dssp TTSC--C--CCCSEEEEECCGGG
T ss_pred eccc--c--hhhcEEEEecCccc
Confidence 8764 2 47999999999754
No 134
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.08 E-value=2e-11 Score=126.66 Aligned_cols=161 Identities=14% Similarity=0.040 Sum_probs=105.8
Q ss_pred ccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecC
Q 010971 158 GFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD 237 (496)
Q Consensus 158 G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D 237 (496)
|.|+--..-..+.+..+.+.++.+|||+|||+|+.++.+++.++....|+|+|+++..++.+ .++.+.+.|
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D 89 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILAD 89 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESC
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCC
Confidence 44443333344455666665677999999999999999998875457999999999888655 468888999
Q ss_pred CCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHH----------HHHHHHHHHHHHHHhhhhcCCCCcE
Q 010971 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----------CSYLQKQLILAAIDMVDANSKSGGY 307 (496)
Q Consensus 238 ~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~----------l~~lQ~~LL~~A~~~l~~~lkpGG~ 307 (496)
...+.. .+.||+|+++||+...+...+-. .......... ...++..++..++++| +|||+
T Consensus 90 ~~~~~~---~~~fD~Ii~NPPy~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~L----k~~G~ 159 (421)
T 2ih2_A 90 FLLWEP---GEAFDLILGNPPYGIVGEASKYP---IHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLL----KPGGV 159 (421)
T ss_dssp GGGCCC---SSCEEEEEECCCCCCBSCTTTCS---BCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHE----EEEEE
T ss_pred hhhcCc---cCCCCEEEECcCccCcccccccc---cccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHh----CCCCE
Confidence 876542 26899999999998766421100 0000111111 1124567899999987 99999
Q ss_pred EEEEeCC--CCCcCCHHHHHHHHHhCCcEEee
Q 010971 308 IVYSTCS--IMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 308 LVYSTCS--i~~eENE~vV~~~L~~~~~~lv~ 337 (496)
+++.+++ +.....+.+.+++++.....++.
T Consensus 160 ~~~i~p~~~l~~~~~~~lr~~l~~~~~~~i~~ 191 (421)
T 2ih2_A 160 LVFVVPATWLVLEDFALLREFLAREGKTSVYY 191 (421)
T ss_dssp EEEEEEGGGGTCGGGHHHHHHHHHHSEEEEEE
T ss_pred EEEEEChHHhcCccHHHHHHHHHhcCCeEEEE
Confidence 9998876 22334456666666553333333
No 135
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.08 E-value=6.9e-10 Score=110.66 Aligned_cols=114 Identities=11% Similarity=-0.032 Sum_probs=88.6
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+.++.+|||+|||+|..+..++....+.+.|+++|+++..++.+++++...|+.+ +.++..|+..++. . +.||.|
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~fD~v 191 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT--R-EGYDLL 191 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--C-SCEEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--c-CCeEEE
Confidence 45789999999999999999886333445799999999999999999999999876 9999999988762 3 789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
++..+ +..-| ++. ....+|..+.+.| +|||+|++++.+
T Consensus 192 ~~~~~------~~~~~------~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~ 229 (305)
T 3ocj_A 192 TSNGL------NIYEP------DDA-------RVTELYRRFWQAL----KPGGALVTSFLT 229 (305)
T ss_dssp ECCSS------GGGCC------CHH-------HHHHHHHHHHHHE----EEEEEEEEECCC
T ss_pred EECCh------hhhcC------CHH-------HHHHHHHHHHHhc----CCCeEEEEEecC
Confidence 97543 11111 111 1235678888876 999999998754
No 136
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.07 E-value=1.1e-09 Score=107.47 Aligned_cols=113 Identities=11% Similarity=0.044 Sum_probs=87.5
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCc
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~f 250 (496)
..+.+.++.+|||+|||+|..+.+++...+ ..|+++|+|+..++.+++++...|+. ++.+...|+..++ +.|
T Consensus 58 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~f 130 (287)
T 1kpg_A 58 GKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-----EPV 130 (287)
T ss_dssp TTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-----CCC
T ss_pred HHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-----CCe
Confidence 345677899999999999999999997653 49999999999999999999999875 6899999987654 679
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|+|++.- ++..-+ .. ....+|..+.++| +|||+|+.++...
T Consensus 131 D~v~~~~------~l~~~~-------~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~~ 171 (287)
T 1kpg_A 131 DRIVSIG------AFEHFG-------HE-------RYDAFFSLAHRLL----PADGVMLLHTITG 171 (287)
T ss_dssp SEEEEES------CGGGTC-------TT-------THHHHHHHHHHHS----CTTCEEEEEEEEE
T ss_pred eEEEEeC------chhhcC-------hH-------HHHHHHHHHHHhc----CCCCEEEEEEecC
Confidence 9999732 221111 00 1234677777775 9999999988664
No 137
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.07 E-value=3.1e-10 Score=105.84 Aligned_cols=103 Identities=16% Similarity=0.148 Sum_probs=84.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDa 257 (496)
++.+|||+|||+|..+..++...+ .+.|+++|+++..++.++.++..+|+.++.+...|+..++. .+.||.|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS---EPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC---CSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc---cCCcCEEEEec
Confidence 478999999999999999998864 47999999999999999999999999889999999987652 36899999742
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 258 PCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
- .+ ...++..+.++| +|||++++....
T Consensus 141 ~-------------------~~-------~~~~l~~~~~~L----~~gG~l~~~~~~ 167 (207)
T 1jsx_A 141 F-------------------AS-------LNDMVSWCHHLP----GEQGRFYALKGQ 167 (207)
T ss_dssp S-------------------SS-------HHHHHHHHTTSE----EEEEEEEEEESS
T ss_pred c-------------------CC-------HHHHHHHHHHhc----CCCcEEEEEeCC
Confidence 1 00 134677777765 999999987554
No 138
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.06 E-value=4.5e-10 Score=109.84 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=96.3
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.++.+|||+|||+|..+..++.+ + ..|+++|+++..++.+++|+..+|+. +.+...|+... +..+.||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~--g-~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~---~~~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL--G-GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA---LPFGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--T-CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH---GGGCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh--C-CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc---CcCCCCCEEEE
Confidence 467899999999999999887774 2 28999999999999999999999987 88888887552 22368999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEE
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKL 335 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~l 335 (496)
+.+. .....++..+.++| +|||+|+.++... +....+..+++..++++
T Consensus 191 n~~~-------------------------~~~~~~l~~~~~~L----kpgG~lils~~~~---~~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 191 NLYA-------------------------ELHAALAPRYREAL----VPGGRALLTGILK---DRAPLVREAMAGAGFRP 238 (254)
T ss_dssp ECCH-------------------------HHHHHHHHHHHHHE----EEEEEEEEEEEEG---GGHHHHHHHHHHTTCEE
T ss_pred CCcH-------------------------HHHHHHHHHHHHHc----CCCCEEEEEeecc---CCHHHHHHHHHHCCCEE
Confidence 7641 11245677777776 9999999976543 45666777777888887
Q ss_pred eec
Q 010971 336 VPC 338 (496)
Q Consensus 336 v~~ 338 (496)
+..
T Consensus 239 ~~~ 241 (254)
T 2nxc_A 239 LEE 241 (254)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 139
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.06 E-value=2.5e-09 Score=100.76 Aligned_cols=113 Identities=12% Similarity=0.202 Sum_probs=87.0
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-----eEEEEecCCCCCccccCCCCc
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-----NTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-----nv~v~~~D~~~~~~~~~~~~f 250 (496)
+.++.+|||+|||+|..+..++.. ...|+++|+++..++.++.++...++. ++.+...|+..++ +..+.|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~ 102 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--FHDSSF 102 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--SCTTCE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--CCCCce
Confidence 357899999999999999999886 358999999999999999999988873 6889999998876 334789
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|+|++... +..-+ ++.. ...+|..+.++| +|||+|+.+++...
T Consensus 103 D~v~~~~~------l~~~~------~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 103 DFAVMQAF------LTSVP------DPKE-------RSRIIKEVFRVL----KPGAYLYLVEFGQN 145 (235)
T ss_dssp EEEEEESC------GGGCC------CHHH-------HHHHHHHHHHHE----EEEEEEEEEEEBCC
T ss_pred eEEEEcch------hhcCC------CHHH-------HHHHHHHHHHHc----CCCeEEEEEECCcc
Confidence 99998532 11111 1111 235677777776 99999999887653
No 140
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.05 E-value=1.1e-09 Score=109.55 Aligned_cols=116 Identities=9% Similarity=0.070 Sum_probs=90.1
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~ 249 (496)
...+.+.+|.+|||+|||+|..+..++...+ ..|+++|+++..++.+++++...|+. ++.+...|+..++ +.
T Consensus 83 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~ 155 (318)
T 2fk8_A 83 LDKLDLKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-----EP 155 (318)
T ss_dssp HTTSCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-----CC
T ss_pred HHhcCCCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-----CC
Confidence 3445678899999999999999999998762 59999999999999999999999986 4889999987664 67
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
||+|++... +..-+ .. ....+|..+.++| +|||+|+.++.....
T Consensus 156 fD~v~~~~~------l~~~~-------~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 156 VDRIVSIEA------FEHFG-------HE-------NYDDFFKRCFNIM----PADGRMTVQSSVSYH 199 (318)
T ss_dssp CSEEEEESC------GGGTC-------GG-------GHHHHHHHHHHHS----CTTCEEEEEEEECCC
T ss_pred cCEEEEeCh------HHhcC-------HH-------HHHHHHHHHHHhc----CCCcEEEEEEeccCC
Confidence 999997422 11111 01 1244677777776 999999998887643
No 141
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.05 E-value=3.2e-10 Score=106.87 Aligned_cols=115 Identities=7% Similarity=0.001 Sum_probs=82.2
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH------------cCCCeEEEEecCCCCC
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR------------MGVTNTIVCNYDGNEL 241 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r------------~g~~nv~v~~~D~~~~ 241 (496)
+.+.++.+|||+|||+|..+..|+.. ...|+|+|+|+.+++.++++... .+..++.++++|+..+
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 45668899999999999999999986 25899999999999999887643 1235788999999888
Q ss_pred ccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 242 PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 242 ~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+... .+.||.|++-. ++. ..... ....++.++.++| +|||++++.|+...
T Consensus 95 ~~~~-~~~fD~v~~~~------~l~-------~l~~~-------~~~~~l~~~~r~L----kpgG~~~l~~~~~~ 144 (203)
T 1pjz_A 95 TARD-IGHCAAFYDRA------AMI-------ALPAD-------MRERYVQHLEALM----PQACSGLLITLEYD 144 (203)
T ss_dssp THHH-HHSEEEEEEES------CGG-------GSCHH-------HHHHHHHHHHHHS----CSEEEEEEEEESSC
T ss_pred Cccc-CCCEEEEEECc------chh-------hCCHH-------HHHHHHHHHHHHc----CCCcEEEEEEEecC
Confidence 6321 15799998622 111 11111 1234567777765 99999777776553
No 142
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.03 E-value=4.7e-10 Score=121.75 Aligned_cols=163 Identities=15% Similarity=0.079 Sum_probs=111.8
Q ss_pred cccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCC-----------------cEEEEEeCCHHHHHHH
Q 010971 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNT-----------------GLIYANEMKASRLKSL 219 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~-----------------g~V~A~D~s~~rl~~l 219 (496)
.|.|+--..-+.+.+.++.|.++.+|||.|||+|+..+.++..+... ..|+|+|+++..+..+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 45444333344566777889999999999999999999988876422 3799999999999999
Q ss_pred HHHHHHcCCCe-----EEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHH
Q 010971 220 TANLHRMGVTN-----TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA 294 (496)
Q Consensus 220 ~~nl~r~g~~n-----v~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A 294 (496)
+.|+...|+.+ +.+.++|+...+. .....||+|+.+||+++........+..... ...+...+.++
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~-~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~--------~~~~~~Fl~~~ 298 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDG-ENLPKAHIVATNPPFGSAAGTNITRTFVHPT--------SNKQLCFMQHI 298 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHH-HTSCCEEEEEECCCCTTCSSCCCCSCCSSCC--------SCHHHHHHHHH
T ss_pred HHHHHHhCCCccccccCCeEeCCCccccc-ccccCCeEEEECCCcccccchhhHhhcCCCC--------CchHHHHHHHH
Confidence 99999889876 7788899866432 1236899999999999875432111111110 11234568888
Q ss_pred HHhhhhcCCCCcEEEEEeCC--CCCcCCHH-HHHHHHHhCC
Q 010971 295 IDMVDANSKSGGYIVYSTCS--IMVTENEA-VIDYALKKRD 332 (496)
Q Consensus 295 ~~~l~~~lkpGG~LVYSTCS--i~~eENE~-vV~~~L~~~~ 332 (496)
+++| +|||++++.+.. ++....+. +-.+++++..
T Consensus 299 l~~L----k~gGr~a~V~p~~~L~~~~~~~~iR~~L~~~~~ 335 (541)
T 2ar0_A 299 IETL----HPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCH 335 (541)
T ss_dssp HHHE----EEEEEEEEEEEHHHHHCCTHHHHHHHHHHHHEE
T ss_pred HHHh----CCCCEEEEEecCcceecCcHHHHHHHHHhhcCC
Confidence 8887 999999887653 22222234 4456666543
No 143
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.03 E-value=2.1e-10 Score=115.89 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=73.5
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeC----CHHHHHHHHHHHHHcCCCeEEEEec-CCCCCccccCCCCc
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEM----KASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTV 250 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~----s~~rl~~l~~nl~r~g~~nv~v~~~-D~~~~~~~~~~~~f 250 (496)
+.+|.+|||+|||||+.|.++++. +.|+|+|+ ++.++..+ .+...|..++.++.. |+..++ ...|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~----~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP----PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC----CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC----cCCC
Confidence 467999999999999999998876 57999999 55433211 122334467888888 888765 2689
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|+|++|.+|+ +|... .+... +..+|..+.+.| +|||.+|..
T Consensus 150 D~V~sd~~~~-~g~~~----------~d~~~-----~l~~L~~~~~~L----kpGG~~v~k 190 (305)
T 2p41_A 150 DTLLCDIGES-SPNPT----------VEAGR-----TLRVLNLVENWL----SNNTQFCVK 190 (305)
T ss_dssp SEEEECCCCC-CSSHH----------HHHHH-----HHHHHHHHHHHC----CTTCEEEEE
T ss_pred CEEEECCccc-cCcch----------hhHHH-----HHHHHHHHHHHh----CCCCEEEEE
Confidence 9999999987 66421 11110 113566666665 999988864
No 144
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.03 E-value=1.8e-10 Score=110.47 Aligned_cols=115 Identities=13% Similarity=0.075 Sum_probs=84.5
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.++.+|||+|||+|..+..++... ...|+++|+|+..++.+++++...+ .++.++.+|+..+...+..+.||.|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEE
Confidence 5789999999999999999886532 2489999999999999999998887 578999999877622244578999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
|.- +. .+ .++. . .....+|..+.++| ||||+|++++++
T Consensus 135 d~~--~~-~~-~~~~------~-------~~~~~~l~~~~r~L----kpgG~l~~~~~~ 172 (236)
T 1zx0_A 135 DTY--PL-SE-ETWH------T-------HQFNFIKNHAFRLL----KPGGVLTYCNLT 172 (236)
T ss_dssp CCC--CC-BG-GGTT------T-------HHHHHHHHTHHHHE----EEEEEEEECCHH
T ss_pred CCc--cc-ch-hhhh------h-------hhHHHHHHHHHHhc----CCCeEEEEEecC
Confidence 721 11 10 1110 0 11234677777776 999999987655
No 145
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.03 E-value=2.3e-09 Score=99.49 Aligned_cols=108 Identities=12% Similarity=0.119 Sum_probs=83.7
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..++ +|||+|||+|..+..++.. ...|+++|+++..++.+++++...+. ++.+...|+..++ +..+.||.|++
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~~~fD~v~~ 100 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFD--IVADAWEGIVS 100 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBS--CCTTTCSEEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcC--CCcCCccEEEE
Confidence 4567 9999999999999888875 35899999999999999999999887 7889999998775 33478999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
.. .. ....+ ...+|..+.++| +|||+|+.++.+..
T Consensus 101 ~~-----~~----------~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 101 IF-----CH----------LPSSL-------RQQLYPKVYQGL----KPGGVFILEGFAPE 135 (202)
T ss_dssp EC-----CC----------CCHHH-------HHHHHHHHHTTC----CSSEEEEEEEECTT
T ss_pred Eh-----hc----------CCHHH-------HHHHHHHHHHhc----CCCcEEEEEEeccc
Confidence 21 11 11111 345677777765 99999999886643
No 146
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.02 E-value=8.9e-10 Score=115.56 Aligned_cols=117 Identities=14% Similarity=0.070 Sum_probs=85.4
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH-------HHcCC--CeEEEEecCCCCC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL-------HRMGV--TNTIVCNYDGNEL 241 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl-------~r~g~--~nv~v~~~D~~~~ 241 (496)
...+.+.+|++|||+|||+|..++.+|...+ ...|+|+|+++..+..+++++ ..+|+ .+|.++++|+..+
T Consensus 166 l~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 166 IDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 3456789999999999999999999988754 357999999999998888765 44676 5799999999887
Q ss_pred ccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 242 PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 242 ~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+.......||+|+++.+|.. |+ + ...|...++. |||||+||.+....
T Consensus 245 p~~d~~~~aDVVf~Nn~~F~-------pd---------l-------~~aL~Ei~Rv----LKPGGrIVssE~f~ 291 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFAFG-------PE---------V-------DHQLKERFAN----MKEGGRIVSSKPFA 291 (438)
T ss_dssp HHHHHHHTCSEEEECCTTCC-------HH---------H-------HHHHHHHHTT----SCTTCEEEESSCSS
T ss_pred ccccccCCccEEEEcccccC-------ch---------H-------HHHHHHHHHc----CCCCcEEEEeeccc
Confidence 53110147999999887531 11 1 1224444454 59999999654443
No 147
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.02 E-value=1.9e-09 Score=111.56 Aligned_cols=113 Identities=16% Similarity=0.197 Sum_probs=88.5
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-----C-C--CeEEEEecCCCCCcc----
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-----G-V--TNTIVCNYDGNELPK---- 243 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~-----g-~--~nv~v~~~D~~~~~~---- 243 (496)
+.+|.+|||+|||+|..+..++...++.+.|+++|+++..++.+++++..+ | . .++.++..|+..+..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 567899999999999999999999866689999999999999999999876 4 3 589999999987621
Q ss_pred ccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 244 VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 244 ~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+..+.||+|++... +..-++ ...+|..+.++| +|||+|++++..
T Consensus 161 ~~~~~~fD~V~~~~~------l~~~~d----------------~~~~l~~~~r~L----kpgG~l~i~~~~ 205 (383)
T 4fsd_A 161 GVPDSSVDIVISNCV------CNLSTN----------------KLALFKEIHRVL----RDGGELYFSDVY 205 (383)
T ss_dssp CCCTTCEEEEEEESC------GGGCSC----------------HHHHHHHHHHHE----EEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccc------hhcCCC----------------HHHHHHHHHHHc----CCCCEEEEEEec
Confidence 234578999998642 111111 135678888876 999999998644
No 148
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.02 E-value=5.4e-10 Score=110.34 Aligned_cols=117 Identities=14% Similarity=0.119 Sum_probs=92.4
Q ss_pred hhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCC
Q 010971 168 FLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 168 ~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~ 247 (496)
.+.-.++...++.+|||+|||+|..+..++...++...|+++|+++..+..+++++...+. ++.+...|+..++. .
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~---~ 87 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL---N 87 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC---S
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc---C
Confidence 3434445667899999999999999999998876557999999999999999999998877 89999999988763 2
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+.||.|++... +..-++ ...+|..+.++| +|||+|+..++.
T Consensus 88 ~~fD~v~~~~~------l~~~~~----------------~~~~l~~~~~~L----kpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 DKYDIAICHAF------LLHMTT----------------PETMLQKMIHSV----KKGGKIICFEPH 128 (284)
T ss_dssp SCEEEEEEESC------GGGCSS----------------HHHHHHHHHHTE----EEEEEEEEEECC
T ss_pred CCeeEEEECCh------hhcCCC----------------HHHHHHHHHHHc----CCCCEEEEEecc
Confidence 68999998542 111111 125677788876 999999988776
No 149
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.01 E-value=1.2e-09 Score=111.25 Aligned_cols=124 Identities=19% Similarity=0.210 Sum_probs=95.2
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccC
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG 246 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~ 246 (496)
+.+....+.+.++.+|||+|||+|..+..++...+ ...|+++|+|+..++.+++++...++. +.+...|+..++
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~---- 258 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV---- 258 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC----
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc----
Confidence 44455566666788999999999999999998753 368999999999999999999999886 456788886653
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
.+.||.|++++|.. .|.. ........+|..+.+.| +|||.|++.+.+..+
T Consensus 259 ~~~fD~Iv~~~~~~-~g~~----------------~~~~~~~~~l~~~~~~L----kpgG~l~i~~~~~~~ 308 (343)
T 2pjd_A 259 KGRFDMIISNPPFH-DGMQ----------------TSLDAAQTLIRGAVRHL----NSGGELRIVANAFLP 308 (343)
T ss_dssp CSCEEEEEECCCCC-SSSH----------------HHHHHHHHHHHHHGGGE----EEEEEEEEEEETTSS
T ss_pred cCCeeEEEECCCcc-cCcc----------------CCHHHHHHHHHHHHHhC----CCCcEEEEEEcCCCC
Confidence 36899999999853 1110 01122355777777776 999999999888765
No 150
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.01 E-value=1.3e-09 Score=104.49 Aligned_cols=136 Identities=14% Similarity=0.080 Sum_probs=96.9
Q ss_pred hcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCE
Q 010971 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
.+...++.+|||+|||+|..+..++... ...|+++|+++..++.+++++... .++.+...|+..++ +..+.||+
T Consensus 88 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~--~~~~~fD~ 161 (254)
T 1xtp_A 88 SLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETAT--LPPNTYDL 161 (254)
T ss_dssp TSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCC--CCSSCEEE
T ss_pred hhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCC--CCCCCeEE
Confidence 3455678999999999999999998875 357999999999999999988665 67889999987765 23478999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc------------CC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT------------EN 320 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e------------EN 320 (496)
|++.. ++. ..+.. ....+|..+.++| +|||+|++++...... -.
T Consensus 162 v~~~~------~l~-------~~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 217 (254)
T 1xtp_A 162 IVIQW------TAI-------YLTDA-------DFVKFFKHCQQAL----TPNGYIFFKENCSTGDRFLVDKEDSSLTRS 217 (254)
T ss_dssp EEEES------CGG-------GSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEBC--CCEEEETTTTEEEBC
T ss_pred EEEcc------hhh-------hCCHH-------HHHHHHHHHHHhc----CCCeEEEEEecCCCcccceecccCCcccCC
Confidence 99732 111 11111 1345677777776 9999999988532211 13
Q ss_pred HHHHHHHHHhCCcEEeec
Q 010971 321 EAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 321 E~vV~~~L~~~~~~lv~~ 338 (496)
.+.+..+|+..+++++.+
T Consensus 218 ~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 218 DIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEe
Confidence 455666666666666544
No 151
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.01 E-value=3.1e-09 Score=99.11 Aligned_cols=107 Identities=15% Similarity=0.101 Sum_probs=83.4
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
...++.+|||+|||+|..+..++.. ...|+++|+++..++.++. .|..++.++..|+..+ ...+.||+|+
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~---~~~~~~D~v~ 112 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW---TPDRQWDAVF 112 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC---CCSSCEEEEE
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC---CCCCceeEEE
Confidence 3677889999999999999999887 3689999999999998877 6777899999999876 2347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+.. ++..- .. .....+|..+.++| +|||+|++++.+.
T Consensus 113 ~~~------~l~~~-------~~-------~~~~~~l~~~~~~L----~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 113 FAH------WLAHV-------PD-------DRFEAFWESVRSAV----APGGVVEFVDVTD 149 (218)
T ss_dssp EES------CGGGS-------CH-------HHHHHHHHHHHHHE----EEEEEEEEEEECC
T ss_pred Eec------hhhcC-------CH-------HHHHHHHHHHHHHc----CCCeEEEEEeCCC
Confidence 742 22111 11 11245677777776 9999999998876
No 152
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.01 E-value=9.1e-10 Score=103.81 Aligned_cols=143 Identities=14% Similarity=0.173 Sum_probs=95.5
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHH----HHcCCCeEEEEecCCCCCccccC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANL----HRMGVTNTIVCNYDGNELPKVLG 246 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl----~r~g~~nv~v~~~D~~~~~~~~~ 246 (496)
...+.+.++.+|||+|||+|..+..++...+ .+.|+++|+++.++..+.+++ ...++.++.+.+.|+..++..
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~-- 96 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL-- 96 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC--
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC--
Confidence 3455678899999999999999999999753 479999999999888654444 356788999999999887632
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC-----------
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI----------- 315 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi----------- 315 (496)
.+. |.|.+..|. . .........+..+|..+.++| +|||+|+++....
T Consensus 97 ~~~-d~v~~~~~~----------------~-~~~~~~~~~~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~ 154 (218)
T 3mq2_A 97 SGV-GELHVLMPW----------------G-SLLRGVLGSSPEMLRGMAAVC----RPGASFLVALNLHAWRPSVPEVGE 154 (218)
T ss_dssp CCE-EEEEEESCC----------------H-HHHHHHHTSSSHHHHHHHHTE----EEEEEEEEEEEGGGBTTBCGGGTT
T ss_pred CCC-CEEEEEccc----------------h-hhhhhhhccHHHHHHHHHHHc----CCCcEEEEEecccccccccccccc
Confidence 244 877754431 0 001011111245677777776 9999999853221
Q ss_pred CCcCCHH----HHHHHHHhCCcEEeec
Q 010971 316 MVTENEA----VIDYALKKRDVKLVPC 338 (496)
Q Consensus 316 ~~eENE~----vV~~~L~~~~~~lv~~ 338 (496)
.+.-+.. .+...+...+++++.+
T Consensus 155 ~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 155 HPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp CCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCccchHHHHHHHHHHHHHcCCCceee
Confidence 1122222 2344566678877665
No 153
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.01 E-value=2.5e-09 Score=100.63 Aligned_cols=108 Identities=13% Similarity=0.141 Sum_probs=84.7
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++... ..|+++|+++..++.+++++...+ .++.++..|+..++ +..+.||+|++.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~--~~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLS--FEDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCC--SCTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCC--CCCCcEEEEEEc
Confidence 458899999999999999888763 289999999999999999999888 67889999998765 334689999987
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+.. .....+ ...+|..+.++| +|||+|+++++.
T Consensus 111 ~~~~-------------~~~~~~-------~~~~l~~~~~~L----~~gG~l~~~~~~ 144 (227)
T 1ve3_A 111 DSIV-------------HFEPLE-------LNQVFKEVRRVL----KPSGKFIMYFTD 144 (227)
T ss_dssp SCGG-------------GCCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred CchH-------------hCCHHH-------HHHHHHHHHHHc----CCCcEEEEEecC
Confidence 5510 011111 245677777776 999999998775
No 154
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.01 E-value=2.7e-09 Score=99.93 Aligned_cols=128 Identities=13% Similarity=0.059 Sum_probs=93.2
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
...++.+|||+|||+|..+..++.. ...|+++|+++..+..++.++ ++.+...|+..++ ..+.||+|+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~---~~~~fD~v~ 107 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD---AIDAYDAVW 107 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC---CCSCEEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC---CCCcEEEEE
Confidence 3557899999999999999998876 358999999999999999887 3456677877776 247899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc-----------CCHHH
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT-----------ENEAV 323 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e-----------ENE~v 323 (496)
+... +. .....+ ...+|..+.++| +|||+|+.+++..... -+.+.
T Consensus 108 ~~~~------l~-------~~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (211)
T 3e23_A 108 AHAC------LL-------HVPRDE-------LADVLKLIWRAL----KPGGLFYASYKSGEGEGRDKLARYYNYPSEEW 163 (211)
T ss_dssp ECSC------GG-------GSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEECCSSCEECTTSCEECCCCHHH
T ss_pred ecCc------hh-------hcCHHH-------HHHHHHHHHHhc----CCCcEEEEEEcCCCcccccccchhccCCCHHH
Confidence 8432 11 111112 245677777776 9999999987765432 25666
Q ss_pred HHHHHHhCC-cEEeec
Q 010971 324 IDYALKKRD-VKLVPC 338 (496)
Q Consensus 324 V~~~L~~~~-~~lv~~ 338 (496)
+..+++..+ ++++.+
T Consensus 164 ~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 164 LRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHCCCSEEEE
T ss_pred HHHHHHhCCCcEEEEE
Confidence 777777767 776654
No 155
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.3e-09 Score=108.23 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=86.8
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CCCeEEEEecCCCCCcccc----CCCC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVL----GLNT 249 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g~~nv~v~~~D~~~~~~~~----~~~~ 249 (496)
..++.+|||+|||+|..+..++..+.....|+++|+++..++.+++++... +..++.++..|+..++... ..+.
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 458999999999999999999987755689999999999999999999987 3467999999998876321 1168
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
||+|++... + .+. . ...+|..+.++| +|||+|++.+++
T Consensus 114 fD~V~~~~~------l------~~~-~----------~~~~l~~~~~~L----kpgG~l~i~~~~ 151 (299)
T 3g5t_A 114 IDMITAVEC------A------HWF-D----------FEKFQRSAYANL----RKDGTIAIWGYA 151 (299)
T ss_dssp EEEEEEESC------G------GGS-C----------HHHHHHHHHHHE----EEEEEEEEEEEE
T ss_pred eeEEeHhhH------H------HHh-C----------HHHHHHHHHHhc----CCCcEEEEEecC
Confidence 999998432 1 111 1 234677777776 999999886554
No 156
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.99 E-value=6e-09 Score=108.44 Aligned_cols=107 Identities=12% Similarity=0.102 Sum_probs=84.5
Q ss_pred CCCcccccccEEEeCCcch---hHH---HhcCCCCCCeEeeccCCCchHHHHHHHHcCC---------------------
Q 010971 150 GATPEYMAGFYMLQSASSF---LPV---MALAPQEKERVIDMAAAPGGKTTYIAALMKN--------------------- 202 (496)
Q Consensus 150 ~~~~~~~~G~~~iQd~sS~---l~v---~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~--------------------- 202 (496)
...+.++.|+...|..+.+ ++. .++...++.+|||.|||+|+.++.+|....+
T Consensus 161 sG~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~ 240 (385)
T 3ldu_A 161 TGDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKI 240 (385)
T ss_dssp CCSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHH
T ss_pred CCChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHH
Confidence 3456788888877766543 222 3345678999999999999999988876532
Q ss_pred ----------------CcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCcCEEEECCCC
Q 010971 203 ----------------TGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 203 ----------------~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~fD~VLlDaPC 259 (496)
...|+++|+++..++.++.|+..+|+. ++.+.+.|+..++. ...||+|++|||.
T Consensus 241 w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~---~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 241 WWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS---EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC---SCBSCEEEECCCC
T ss_pred HHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc---CCCCcEEEECCCC
Confidence 147999999999999999999999997 59999999988753 2589999999994
No 157
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.99 E-value=4.3e-10 Score=111.87 Aligned_cols=113 Identities=15% Similarity=0.211 Sum_probs=84.9
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC---------CeEEEEecCCCCCcccc
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV---------TNTIVCNYDGNELPKVL 245 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g~---------~nv~v~~~D~~~~~~~~ 245 (496)
..+.+|||+|||+|+.+..++.. +.+.|+++|+++..++.+++++ .+ ++ .++.++..|+..+...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45689999999999999988876 4479999999999999999998 55 33 4689999998765322
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
.+.||+|++|+|+. .|. + .. + .+.+++..+.+.| +|||.|+..+++..
T Consensus 150 -~~~fD~Ii~d~~~~-~~~----~--------~~---l--~~~~~l~~~~~~L----~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 150 -NRGFDVIIADSTDP-VGP----A--------KV---L--FSEEFYRYVYDAL----NNPGIYVTQAGSVY 197 (281)
T ss_dssp -CCCEEEEEEECCCC-C--------------------T--TSHHHHHHHHHHE----EEEEEEEEEEEETT
T ss_pred -cCCeeEEEECCCCC-CCc----c--------hh---h--hHHHHHHHHHHhc----CCCcEEEEEcCCcc
Confidence 37899999999862 120 0 00 0 1245677777776 99999999887754
No 158
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.99 E-value=4.3e-09 Score=103.37 Aligned_cols=131 Identities=13% Similarity=0.172 Sum_probs=98.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++...|+ .++.++..|+..++.. ..+.||+|++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~v~~~ 143 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH-LETPVDLILFH 143 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-CSSCEEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-cCCCceEEEEC
Confidence 4789999999999999999886 36899999999999999999999999 5799999999887643 34789999985
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC--------------------
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM-------------------- 316 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~-------------------- 316 (496)
.. +..-++ ...+|..+.++| +|||+|+.++....
T Consensus 144 ~~------l~~~~~----------------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (285)
T 4htf_A 144 AV------LEWVAD----------------PRSVLQTLWSVL----RPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMP 197 (285)
T ss_dssp SC------GGGCSC----------------HHHHHHHHHHTE----EEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCC
T ss_pred ch------hhcccC----------------HHHHHHHHHHHc----CCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhcc
Confidence 32 211111 134677777776 99999998875311
Q ss_pred ----------CcCCHHHHHHHHHhCCcEEeec
Q 010971 317 ----------VTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 317 ----------~eENE~vV~~~L~~~~~~lv~~ 338 (496)
..=..+.+..+|+..+++++..
T Consensus 198 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~ 229 (285)
T 4htf_A 198 KKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGK 229 (285)
T ss_dssp CC----CCCSCCBCHHHHHHHHHHTTCEEEEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHCCCceeee
Confidence 1113456667777888887754
No 159
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.99 E-value=1.4e-09 Score=102.22 Aligned_cols=109 Identities=12% Similarity=0.133 Sum_probs=82.2
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEE
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
+.+.++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++. .++.++..|+..++. . +.||+|
T Consensus 41 ~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~--~-~~fD~v 110 (220)
T 3hnr_A 41 VVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEV--P-TSIDTI 110 (220)
T ss_dssp HHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCC--C-SCCSEE
T ss_pred hhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCC--C-CCeEEE
Confidence 44568899999999999999998886 3689999999999999888765 567889999988763 2 789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
++... +.. .... .+..+|..+.++| +|||+|+.++....
T Consensus 111 ~~~~~------l~~-------~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 111 VSTYA------FHH-------LTDD-------EKNVAIAKYSQLL----NKGGKIVFADTIFA 149 (220)
T ss_dssp EEESC------GGG-------SCHH-------HHHHHHHHHHHHS----CTTCEEEEEEECBS
T ss_pred EECcc------hhc-------CChH-------HHHHHHHHHHHhc----CCCCEEEEEecccc
Confidence 98532 111 1111 1134677777775 99999999875543
No 160
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.98 E-value=1.6e-09 Score=100.68 Aligned_cols=123 Identities=11% Similarity=0.082 Sum_probs=87.7
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.++.+|||+|||+|..+..++... ...|+++|+++..++.+++++.. ..++.+...|+..++ +..+.||+|++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~--~~~~~fD~v~~ 113 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGG--FPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLD--FPSASFDVVLE 113 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTT--CCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCC--SCSSCEEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcC--CCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCC--CCCCcccEEEE
Confidence 3678999999999999999888762 23899999999999999998864 357888899998774 33478999998
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
..+.... ...++ ..|....... .....+|..+.++| +|||++++++++.
T Consensus 114 ~~~~~~~--~~~~~-~~~~~~~~~~----~~~~~~l~~~~~~L----kpgG~li~~~~~~ 162 (215)
T 2pxx_A 114 KGTLDAL--LAGER-DPWTVSSEGV----HTVDQVLSEVSRVL----VPGGRFISMTSAA 162 (215)
T ss_dssp ESHHHHH--TTTCS-CTTSCCHHHH----HHHHHHHHHHHHHE----EEEEEEEEEESCC
T ss_pred Ccchhhh--ccccc-cccccccchh----HHHHHHHHHHHHhC----cCCCEEEEEeCCC
Confidence 6652111 00010 1222222222 23356788888876 9999999988764
No 161
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.98 E-value=1.6e-09 Score=103.86 Aligned_cols=134 Identities=10% Similarity=0.056 Sum_probs=97.8
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++... ...|+++|+++..++.+++++...+..++.++..|+..++. ..+.||+|+++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD~v~~~ 153 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP--EPDSYDVIWIQ 153 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC--CSSCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC--CCCCEEEEEEc
Confidence 368999999999999998887764 35899999999999999999988876678899999877653 23689999985
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC-----------cCCHHHHH
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV-----------TENEAVID 325 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~-----------eENE~vV~ 325 (496)
.. +.. .... ....+|..+.++| +|||+|++++..... .-+.+.+.
T Consensus 154 ~~------l~~-------~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (241)
T 2ex4_A 154 WV------IGH-------LTDQ-------HLAEFLRRCKGSL----RPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVR 209 (241)
T ss_dssp SC------GGG-------SCHH-------HHHHHHHHHHHHE----EEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHH
T ss_pred ch------hhh-------CCHH-------HHHHHHHHHHHhc----CCCeEEEEEEccCCCcceecccCCcccCCHHHHH
Confidence 32 111 1111 1245677777776 999999997754321 01456667
Q ss_pred HHHHhCCcEEeec
Q 010971 326 YALKKRDVKLVPC 338 (496)
Q Consensus 326 ~~L~~~~~~lv~~ 338 (496)
.+++..+++++..
T Consensus 210 ~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 210 RIICSAGLSLLAE 222 (241)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCeEEEe
Confidence 7777777776654
No 162
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.98 E-value=2.2e-09 Score=105.48 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=85.3
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcC
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
..+...++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++...|+ ++.+...|+..++. .+.||
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~---~~~fD 186 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI---QENYD 186 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC---CSCEE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc---cCCcc
Confidence 3344457899999999999999999886 25899999999999999999999998 89999999987653 37899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+|++..+..- .+.. ....+|..+.++| +|||++++.+
T Consensus 187 ~i~~~~~~~~-------------~~~~-------~~~~~l~~~~~~L----kpgG~l~i~~ 223 (286)
T 3m70_A 187 FIVSTVVFMF-------------LNRE-------RVPSIIKNMKEHT----NVGGYNLIVA 223 (286)
T ss_dssp EEEECSSGGG-------------SCGG-------GHHHHHHHHHHTE----EEEEEEEEEE
T ss_pred EEEEccchhh-------------CCHH-------HHHHHHHHHHHhc----CCCcEEEEEE
Confidence 9998664211 1111 1234677777776 9999976643
No 163
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.97 E-value=3.1e-09 Score=104.08 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=86.8
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
+.++.+|||+|||+|..+..++.. +.+.|+++|+++..+..+++++...|. .++.++..|+..++.. ..+.||+|+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~v~ 138 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-LGKEFDVIS 138 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-CSSCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-CCCCcCEEE
Confidence 467899999999999999988775 345899999999999999999999887 4689999999876531 247899999
Q ss_pred ECCCCCCCCcccCCchhhcc-CCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 255 LDAPCSGTGVISKDESVKTS-KSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~-~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+... +. +. .+.. ....+|..+.++| +|||+|+.+++.
T Consensus 139 ~~~~------l~------~~~~~~~-------~~~~~l~~~~~~L----kpgG~l~~~~~~ 176 (298)
T 1ri5_A 139 SQFS------FH------YAFSTSE-------SLDIAQRNIARHL----RPGGYFIMTVPS 176 (298)
T ss_dssp EESC------GG------GGGSSHH-------HHHHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred ECch------hh------hhcCCHH-------HHHHHHHHHHHhc----CCCCEEEEEECC
Confidence 8532 10 00 1111 2345677777776 999999998866
No 164
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.97 E-value=1.5e-09 Score=105.65 Aligned_cols=121 Identities=14% Similarity=0.125 Sum_probs=87.6
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHH------HHHHHHHHHHHcCC-CeEEEEecC---C
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKAS------RLKSLTANLHRMGV-TNTIVCNYD---G 238 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~------rl~~l~~nl~r~g~-~nv~v~~~D---~ 238 (496)
.....+.+.+|.+|||+|||+|..+.+++...+..+.|+++|+++. .++.+++++...|+ .++.+...| .
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD 113 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh
Confidence 3345567889999999999999999999998755579999999997 89999999999988 479999988 3
Q ss_pred CCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 239 NELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 239 ~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
..++ +..+.||+|++..+ +..-+ .+ ..++..... + ++|||+|+.++.+...
T Consensus 114 ~~~~--~~~~~fD~v~~~~~------l~~~~------~~----------~~~~~~~~~-l---~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 114 DLGP--IADQHFDRVVLAHS------LWYFA------SA----------NALALLFKN-M---AAVCDHVDVAEWSMQP 164 (275)
T ss_dssp CCGG--GTTCCCSEEEEESC------GGGSS------CH----------HHHHHHHHH-H---TTTCSEEEEEEECSSC
T ss_pred ccCC--CCCCCEEEEEEccc------hhhCC------CH----------HHHHHHHHH-H---hCCCCEEEEEEecCCC
Confidence 3333 33478999997543 11111 11 112333333 3 3779999998877643
No 165
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.96 E-value=8e-10 Score=106.38 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=81.9
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCC-HHHHHHH---HHHHHHcCCCeEEEEecCCCCCccccCCCCcC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMK-ASRLKSL---TANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s-~~rl~~l---~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
.+++.+|||+|||+|..+..++... ..+.|+++|+| +..++.+ ++++.+.|+.|+.+...|+..++..+. ..||
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~-d~v~ 99 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELK-NIAD 99 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGT-TCEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhcc-CeEE
Confidence 4689999999999999999998764 34789999999 5545444 888888999999999999998865332 5677
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.|.+..| |.. ...........+|..+.++| ||||+|+.++
T Consensus 100 ~i~~~~~----------------~~~-~~~~~~~~~~~~l~~~~r~L----kpGG~l~i~~ 139 (225)
T 3p2e_A 100 SISILFP----------------WGT-LLEYVIKPNRDILSNVADLA----KKEAHFEFVT 139 (225)
T ss_dssp EEEEESC----------------CHH-HHHHHHTTCHHHHHHHHTTE----EEEEEEEEEE
T ss_pred EEEEeCC----------------CcH-HhhhhhcchHHHHHHHHHhc----CCCcEEEEEE
Confidence 7877665 111 01111111234566666665 9999999844
No 166
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.96 E-value=2e-09 Score=106.83 Aligned_cols=113 Identities=17% Similarity=0.147 Sum_probs=85.7
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEecCCCCCccccCCCCc
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~---~nv~v~~~D~~~~~~~~~~~~f 250 (496)
+.+.+ .+|||+|||+|..+..++.. ...|+++|+++..++.+++++...++ .++.++..|+..++. .+.|
T Consensus 79 ~~~~~-~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~f 151 (299)
T 3g2m_A 79 TGPVS-GPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL---DKRF 151 (299)
T ss_dssp HCCCC-SCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC---SCCE
T ss_pred hCCCC-CcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc---CCCc
Confidence 34444 49999999999999988876 35899999999999999999998886 579999999998763 3789
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|.|++... ++ ...+.. .+..+|..+.++| +|||+|++++....
T Consensus 152 D~v~~~~~-----~~-------~~~~~~-------~~~~~l~~~~~~L----~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 152 GTVVISSG-----SI-------NELDEA-------DRRGLYASVREHL----EPGGKFLLSLAMSE 194 (299)
T ss_dssp EEEEECHH-----HH-------TTSCHH-------HHHHHHHHHHHHE----EEEEEEEEEEECCH
T ss_pred CEEEECCc-----cc-------ccCCHH-------HHHHHHHHHHHHc----CCCcEEEEEeecCc
Confidence 99986211 00 011221 2345677777776 99999999987753
No 167
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.95 E-value=1.1e-09 Score=109.96 Aligned_cols=125 Identities=18% Similarity=0.119 Sum_probs=84.4
Q ss_pred cCCCCCCeEeeccC------CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEE-EecCCCCCccccC
Q 010971 174 LAPQEKERVIDMAA------APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIV-CNYDGNELPKVLG 246 (496)
Q Consensus 174 L~~~~g~~VLDmcA------gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v-~~~D~~~~~~~~~ 246 (496)
+.+.+|.+|||+|| |||+ ..++.+++..+.|+|+|+++. +.++.+ +.+|+..++.
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~--- 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHT--- 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCC---
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCc---
Confidence 46788999999999 7788 566777776689999999987 246777 8999987642
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~ 326 (496)
.+.||+|++|+++..+|....+... . ..+...+|..+.+.| +|||.|+..+-.. ...++ +..
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~~~d~~~----~-------~~l~~~~l~~a~r~L----kpGG~~v~~~~~~--~~~~~-l~~ 182 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHVTKENDS----K-------EGFFTYLCGFIKQKL----ALGGSIAVKITEH--SWNAD-LYK 182 (290)
T ss_dssp SSCEEEEEECCCCCC---CCSCCCC----C-------CTHHHHHHHHHHHHE----EEEEEEEEEECSS--SCCHH-HHH
T ss_pred cCcccEEEEcCCccccccccccccc----h-------HHHHHHHHHHHHHhc----CCCcEEEEEEecc--CCHHH-HHH
Confidence 2679999999887777765432110 0 112245677777776 9999999865332 33343 444
Q ss_pred HHHhCCcE
Q 010971 327 ALKKRDVK 334 (496)
Q Consensus 327 ~L~~~~~~ 334 (496)
+++..++.
T Consensus 183 ~l~~~GF~ 190 (290)
T 2xyq_A 183 LMGHFSWW 190 (290)
T ss_dssp HHTTEEEE
T ss_pred HHHHcCCc
Confidence 55554444
No 168
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.95 E-value=1.4e-09 Score=108.22 Aligned_cols=117 Identities=15% Similarity=0.067 Sum_probs=82.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-----------------------------
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV----------------------------- 228 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~----------------------------- 228 (496)
++.+|||+|||+|..+..|+..++. ..|+++|+++..++.+++++..++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 6899999999999999999998754 6999999999999999999877653
Q ss_pred -----------------------------CeEEEEecCCCCCccc---cCCCCcCEEEECCCCCCCCcccCCchhhccCC
Q 010971 229 -----------------------------TNTIVCNYDGNELPKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKS 276 (496)
Q Consensus 229 -----------------------------~nv~v~~~D~~~~~~~---~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s 276 (496)
.+|.+..+|....+.. +..+.||+|++... + .|-
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v------l------~~i-- 190 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL------T------KWV-- 190 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC------H------HHH--
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH------H------HHh--
Confidence 3789999998754311 13478999998321 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 277 LEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 277 ~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.+..-.....++|..+.++| +|||+|+..+..+
T Consensus 191 --hl~~~~~~~~~~l~~~~~~L----kpGG~lil~~~~~ 223 (292)
T 3g07_A 191 --HLNWGDEGLKRMFRRIYRHL----RPGGILVLEPQPW 223 (292)
T ss_dssp --HHHHHHHHHHHHHHHHHHHE----EEEEEEEEECCCH
T ss_pred --hhcCCHHHHHHHHHHHHHHh----CCCcEEEEecCCc
Confidence 00001123456788888876 9999999876543
No 169
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=7.5e-09 Score=108.07 Aligned_cols=106 Identities=12% Similarity=0.144 Sum_probs=83.6
Q ss_pred CCcccccccEEEeCCcch---hH---HHhcCCCCCCeEeeccCCCchHHHHHHHHcCC----------------------
Q 010971 151 ATPEYMAGFYMLQSASSF---LP---VMALAPQEKERVIDMAAAPGGKTTYIAALMKN---------------------- 202 (496)
Q Consensus 151 ~~~~~~~G~~~iQd~sS~---l~---v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~---------------------- 202 (496)
..+.++.|+-..|..+.+ ++ +.+....++..|||.|||+|+.++.+|.+..+
T Consensus 168 g~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w 247 (393)
T 3k0b_A 168 GAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVW 247 (393)
T ss_dssp SSCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHH
T ss_pred CCcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHH
Confidence 445677777655555442 22 23456778999999999999999888776543
Q ss_pred ---------------CcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEEECCCC
Q 010971 203 ---------------TGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 203 ---------------~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VLlDaPC 259 (496)
...|+++|+|+..++.++.|+..+|+.+ +.+.+.|+..++. ...||+|++|||+
T Consensus 248 ~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~---~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 248 ADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT---EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC---CCCSCEEEECCCC
T ss_pred HHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC---CCCCCEEEECCCC
Confidence 1469999999999999999999999975 8999999988753 2589999999995
No 170
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.94 E-value=4.6e-09 Score=97.53 Aligned_cols=126 Identities=13% Similarity=0.034 Sum_probs=92.7
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaP 258 (496)
+.+|||+|||+|..+..++.. ...|+++|+++..++.++++ ..++.++..|+..++ +..+.||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~--~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLS--DSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGG--GSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccc--cCCCCeEEEEehhh
Confidence 889999999999999998886 35899999999999988877 346888999998776 33478999998432
Q ss_pred CCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC------------cCCHHHHHH
Q 010971 259 CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV------------TENEAVIDY 326 (496)
Q Consensus 259 CSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~------------eENE~vV~~ 326 (496)
+..-+ .++ ...+|..+.++| +|||+|+.++..... .-....+..
T Consensus 112 ------l~~~~-------~~~-------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (203)
T 3h2b_A 112 ------LIHMG-------PGE-------LPDALVALRMAV----EDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQ 167 (203)
T ss_dssp ------STTCC-------TTT-------HHHHHHHHHHTE----EEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHH
T ss_pred ------HhcCC-------HHH-------HHHHHHHHHHHc----CCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHH
Confidence 11111 111 234677777776 999999998865432 123566777
Q ss_pred HHHhCCcEEeec
Q 010971 327 ALKKRDVKLVPC 338 (496)
Q Consensus 327 ~L~~~~~~lv~~ 338 (496)
+|+..+++++.+
T Consensus 168 ~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 168 ALETAGFQVTSS 179 (203)
T ss_dssp HHHHTTEEEEEE
T ss_pred HHHHCCCcEEEE
Confidence 777878777765
No 171
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.93 E-value=8.1e-09 Score=107.53 Aligned_cols=107 Identities=8% Similarity=0.098 Sum_probs=83.4
Q ss_pred CCCcccccccEEEeCCcch---hH---HHhcCCCCCCeEeeccCCCchHHHHHHHHcCC---------------------
Q 010971 150 GATPEYMAGFYMLQSASSF---LP---VMALAPQEKERVIDMAAAPGGKTTYIAALMKN--------------------- 202 (496)
Q Consensus 150 ~~~~~~~~G~~~iQd~sS~---l~---v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~--------------------- 202 (496)
...+.++.||-..|..+.+ ++ +.+....++..|||.|||+|+..+.+|.+..+
T Consensus 160 sg~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~ 239 (384)
T 3ldg_A 160 TGPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEAL 239 (384)
T ss_dssp SSSCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHH
T ss_pred cCCcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHH
Confidence 3446678887766665542 22 23445778999999999999999888776543
Q ss_pred ----------------CcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEEECCCC
Q 010971 203 ----------------TGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 203 ----------------~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VLlDaPC 259 (496)
...|+++|+|+..++.++.|+..+|+.+ +.+.+.|+..++. ...||+|++|||+
T Consensus 240 w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~---~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 240 VTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT---NKINGVLISNPPY 310 (384)
T ss_dssp HHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC---CCCSCEEEECCCC
T ss_pred HHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc---cCCcCEEEECCch
Confidence 1469999999999999999999999976 9999999988763 2589999999996
No 172
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.93 E-value=3.3e-09 Score=98.70 Aligned_cols=112 Identities=17% Similarity=0.076 Sum_probs=83.6
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..++.+|||+|||+|..++.++... ...|+++|+|+..++.+++++...+ .++.+...|+..++ +..+.||.|++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~--~~~~~fD~v~~ 95 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLP--FKDESMSFVYS 95 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCC--SCTTCEEEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCC--CCCCceeEEEE
Confidence 4578999999999999865554432 3689999999999999999998877 46778889998776 33478999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
... +. .+...+ ...+|..+.+.| +|||++++++++..
T Consensus 96 ~~~------l~-------~~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 96 YGT------IF-------HMRKND-------VKEAIDEIKRVL----KPGGLACINFLTTK 132 (209)
T ss_dssp CSC------GG-------GSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEETT
T ss_pred cCh------HH-------hCCHHH-------HHHHHHHHHHHc----CCCcEEEEEEeccc
Confidence 422 11 111122 345677777776 99999999988753
No 173
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.92 E-value=2.3e-09 Score=98.11 Aligned_cols=133 Identities=14% Similarity=0.088 Sum_probs=90.3
Q ss_pred hHHHhcCC--CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccC
Q 010971 169 LPVMALAP--QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG 246 (496)
Q Consensus 169 l~v~~L~~--~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~ 246 (496)
+.+..+.. .++.+|||+|||+|..+..++... .|+|+|+|+..++. ..++.+.++|+.... .
T Consensus 12 ~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~---~ 75 (170)
T 3q87_B 12 TLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------HRGGNLVRADLLCSI---N 75 (170)
T ss_dssp HHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------CSSSCEEECSTTTTB---C
T ss_pred HHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------ccCCeEEECChhhhc---c
Confidence 33444544 678899999999999999887653 89999999999887 456788899987632 2
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~ 326 (496)
.+.||.|++++|.....-.. . +.-... ...++...++. + |||++++++.+. .+...+..
T Consensus 76 ~~~fD~i~~n~~~~~~~~~~----~-~~~~~~--------~~~~~~~~~~~----l-pgG~l~~~~~~~---~~~~~l~~ 134 (170)
T 3q87_B 76 QESVDVVVFNPPYVPDTDDP----I-IGGGYL--------GREVIDRFVDA----V-TVGMLYLLVIEA---NRPKEVLA 134 (170)
T ss_dssp GGGCSEEEECCCCBTTCCCT----T-TBCCGG--------GCHHHHHHHHH----C-CSSEEEEEEEGG---GCHHHHHH
T ss_pred cCCCCEEEECCCCccCCccc----c-ccCCcc--------hHHHHHHHHhh----C-CCCEEEEEEecC---CCHHHHHH
Confidence 36899999999964322110 0 100101 12245555554 3 999999887654 45566667
Q ss_pred HHHhCCcEEeec
Q 010971 327 ALKKRDVKLVPC 338 (496)
Q Consensus 327 ~L~~~~~~lv~~ 338 (496)
+++..+++.+.+
T Consensus 135 ~l~~~gf~~~~~ 146 (170)
T 3q87_B 135 RLEERGYGTRIL 146 (170)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHCCCcEEEE
Confidence 777778776654
No 174
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.92 E-value=9.1e-09 Score=98.96 Aligned_cols=110 Identities=13% Similarity=0.102 Sum_probs=82.5
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcC
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
..+...++.+|||+|||+|..+..++... ...|+++|+++..++.+++++. ..++.+...|+..++ +..+.||
T Consensus 38 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~--~~~~~fD 110 (253)
T 3g5l_A 38 KMLPDFNQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIA--IEPDAYN 110 (253)
T ss_dssp TTCCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCC--CCTTCEE
T ss_pred HhhhccCCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCC--CCCCCeE
Confidence 33455689999999999999999998863 2389999999999999888765 457889999988776 3347899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+|++... +..-++ ...+|..+.++| +|||+|++++.+
T Consensus 111 ~v~~~~~------l~~~~~----------------~~~~l~~~~~~L----kpgG~l~~~~~~ 147 (253)
T 3g5l_A 111 VVLSSLA------LHYIAS----------------FDDICKKVYINL----KSSGSFIFSVEH 147 (253)
T ss_dssp EEEEESC------GGGCSC----------------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred EEEEchh------hhhhhh----------------HHHHHHHHHHHc----CCCcEEEEEeCC
Confidence 9998421 111111 134677777776 999999998543
No 175
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.91 E-value=7.1e-09 Score=98.60 Aligned_cols=129 Identities=12% Similarity=0.082 Sum_probs=94.7
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.++.+|||+|||+|..+..++.. ...|+++|+++..++.++++. ...++.++..|+..++ +..+.||+|++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~--~~~~~fD~v~~ 122 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLP--FENEQFEAIMA 122 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCS--SCTTCEEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCC--CCCCCccEEEE
Confidence 457899999999999999999886 358999999999999888774 3457889999998876 33478999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc-----------------
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT----------------- 318 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e----------------- 318 (496)
.. ++..-++ ...+|..+.++| +|||+|+.++......
T Consensus 123 ~~------~l~~~~~----------------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (242)
T 3l8d_A 123 IN------SLEWTEE----------------PLRALNEIKRVL----KSDGYACIAILGPTAKPRENSYPRLYGKDVVCN 176 (242)
T ss_dssp ES------CTTSSSC----------------HHHHHHHHHHHE----EEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSC
T ss_pred cC------hHhhccC----------------HHHHHHHHHHHh----CCCeEEEEEEcCCcchhhhhhhhhhcccccccc
Confidence 32 2211111 124677777776 9999999988543221
Q ss_pred -CCHHHHHHHHHhCCcEEeec
Q 010971 319 -ENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 319 -ENE~vV~~~L~~~~~~lv~~ 338 (496)
-....+..++...+++++..
T Consensus 177 ~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 177 TMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp CCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCHHHHHHHHHHcCCEEEEe
Confidence 23345667777888887765
No 176
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.91 E-value=5.4e-09 Score=100.42 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=83.9
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCc
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~f 250 (496)
...+.+.++.+|||+|||+|..+..++...+ .+.|+++|+++..++.++++ ..++.+...|+..++ . .+.|
T Consensus 26 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~-~--~~~f 96 (259)
T 2p35_A 26 LAQVPLERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK-P--AQKA 96 (259)
T ss_dssp HTTCCCSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-C--SSCE
T ss_pred HHhcCCCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-c--cCCc
Confidence 4445667899999999999999999999874 47899999999999998887 357888999998876 2 3789
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|+|++... +. +.. ....+|..+.++| +|||+|+.++...
T Consensus 97 D~v~~~~~------l~------~~~----------~~~~~l~~~~~~L----~pgG~l~~~~~~~ 135 (259)
T 2p35_A 97 DLLYANAV------FQ------WVP----------DHLAVLSQLMDQL----ESGGVLAVQMPDN 135 (259)
T ss_dssp EEEEEESC------GG------GST----------THHHHHHHHGGGE----EEEEEEEEEEECC
T ss_pred CEEEEeCc------hh------hCC----------CHHHHHHHHHHhc----CCCeEEEEEeCCC
Confidence 99998432 11 110 1234577777765 9999999988543
No 177
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.90 E-value=3.7e-09 Score=107.92 Aligned_cols=113 Identities=12% Similarity=0.098 Sum_probs=84.6
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcCE
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
+...++.+|||+|||+|..+..+++. +.+.|+|+|+++ .++.+++++...|+ .++.++..|+..++ ++.+.||+
T Consensus 60 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~ 134 (340)
T 2fyt_A 60 PHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH--LPVEKVDV 134 (340)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC--CSCSCEEE
T ss_pred hhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc--CCCCcEEE
Confidence 44567899999999999999988876 346899999996 89999999999998 57999999998875 33368999
Q ss_pred EEECCC-CCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 253 VLLDAP-CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDaP-CSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|+++.. +... .... ...+|..+.++| +|||.|+.+.|++
T Consensus 135 Ivs~~~~~~l~-------------~~~~-------~~~~l~~~~~~L----kpgG~lip~~~~~ 174 (340)
T 2fyt_A 135 IISEWMGYFLL-------------FESM-------LDSVLYAKNKYL----AKGGSVYPDICTI 174 (340)
T ss_dssp EEECCCBTTBT-------------TTCH-------HHHHHHHHHHHE----EEEEEEESCEEEE
T ss_pred EEEcCchhhcc-------------CHHH-------HHHHHHHHHhhc----CCCcEEEcccceE
Confidence 998752 1110 0011 123566666665 9999999555543
No 178
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.90 E-value=2.3e-09 Score=116.42 Aligned_cols=158 Identities=17% Similarity=0.180 Sum_probs=107.0
Q ss_pred chhHHHhcC----CCCCCeEeeccCCCchHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHcCC--CeEEEEecCC
Q 010971 167 SFLPVMALA----PQEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSLTANLHRMGV--TNTIVCNYDG 238 (496)
Q Consensus 167 S~l~v~~L~----~~~g~~VLDmcAgpGgKT~~lA~l~~~--~g~V~A~D~s~~rl~~l~~nl~r~g~--~nv~v~~~D~ 238 (496)
+.+.+.++. +.++.+|||.|||+|+..+.++..+.. ...|+|+|+++..+..++.|+...|+ .++.+.++|.
T Consensus 206 v~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDt 285 (542)
T 3lkd_A 206 AKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADT 285 (542)
T ss_dssp HHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCT
T ss_pred HHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecce
Confidence 445555555 678999999999999999988888742 46899999999999999999999998 5688899998
Q ss_pred CCC--ccccCCCCcCEEEECCCCCCCCccc----CCchhh-cc-CCHHHHHHHHHHHHHHHHHHHHhhhhcCC-CCcEEE
Q 010971 239 NEL--PKVLGLNTVDRVLLDAPCSGTGVIS----KDESVK-TS-KSLEDIQKCSYLQKQLILAAIDMVDANSK-SGGYIV 309 (496)
Q Consensus 239 ~~~--~~~~~~~~fD~VLlDaPCSg~G~i~----r~p~~k-~~-~s~~~i~~l~~lQ~~LL~~A~~~l~~~lk-pGG~LV 309 (496)
... |. .....||+|+.+||.++..-.. .++... +. ..+. ...+...+.+++..| + +||+++
T Consensus 286 L~~d~p~-~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~-----s~~~~~Fl~~~l~~L----k~~gGr~a 355 (542)
T 3lkd_A 286 LDEDWPT-QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPK-----SKADFAFLLHGYYHL----KQDNGVMA 355 (542)
T ss_dssp TTSCSCC-SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCT-----TCCHHHHHHHHHHTB----CTTTCEEE
T ss_pred ecccccc-cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCC-----chhhHHHHHHHHHHh----CCCceeEE
Confidence 765 33 2347899999999998542111 111110 10 1000 111234788888886 9 999987
Q ss_pred EEeCC-CCCcCC-HH-HHHHHHHhCCcE
Q 010971 310 YSTCS-IMVTEN-EA-VIDYALKKRDVK 334 (496)
Q Consensus 310 YSTCS-i~~eEN-E~-vV~~~L~~~~~~ 334 (496)
+.+-. ++...+ +. +-++++++..+.
T Consensus 356 ~VlP~g~Lf~~~~~~~iRk~Lle~~~l~ 383 (542)
T 3lkd_A 356 IVLPHGVLFRGNAEGTIRKALLEEGAID 383 (542)
T ss_dssp EEEETHHHHCCTHHHHHHHHHHHTTCEE
T ss_pred EEecchHhhCCchhHHHHHHHHhCCcee
Confidence 76543 322233 34 445666665543
No 179
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.90 E-value=6.8e-09 Score=109.72 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=82.1
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHH-------HHHHHHcC--CCeEEEEecCCCCCc
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSL-------TANLHRMG--VTNTIVCNYDGNELP 242 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l-------~~nl~r~g--~~nv~v~~~D~~~~~ 242 (496)
..+.+.+|.+|||+|||+|..+..+|...+ .+.|+++|+++..++.+ +.++..+| +.++.++.+|....+
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~ 314 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDN 314 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTC
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccc
Confidence 446778999999999999999999999874 35899999999998888 89999999 578999887654321
Q ss_pred ccc--CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 243 KVL--GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 243 ~~~--~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
..+ ....||+|+++..+. . .++ ...|..+.+. |+|||+||.+
T Consensus 315 ~~~~~~~~~FDvIvvn~~l~---------------~-~d~-------~~~L~el~r~----LKpGG~lVi~ 358 (433)
T 1u2z_A 315 NRVAELIPQCDVILVNNFLF---------------D-EDL-------NKKVEKILQT----AKVGCKIISL 358 (433)
T ss_dssp HHHHHHGGGCSEEEECCTTC---------------C-HHH-------HHHHHHHHTT----CCTTCEEEES
T ss_pred cccccccCCCCEEEEeCccc---------------c-ccH-------HHHHHHHHHh----CCCCeEEEEe
Confidence 100 126799999864321 0 111 1235555555 4999999875
No 180
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.90 E-value=1.6e-08 Score=91.20 Aligned_cols=106 Identities=14% Similarity=0.218 Sum_probs=79.8
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcC
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
..+.+.++.+|||+|||+|..+..++... ..|+++|+++..++.++++ ..++.+...| ++ +..+.||
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~--~~~~~~D 77 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP---KE--IPDNSVD 77 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GG--SCTTCEE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CC--CCCCceE
Confidence 34456789999999999999999888865 4899999999999999888 4578888888 32 2347899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+|++.... ..-++ ...+|..+.+.| +|||+++.++....
T Consensus 78 ~v~~~~~l------~~~~~----------------~~~~l~~~~~~L----~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 78 FILFANSF------HDMDD----------------KQHVISEVKRIL----KDDGRVIIIDWRKE 116 (170)
T ss_dssp EEEEESCS------TTCSC----------------HHHHHHHHHHHE----EEEEEEEEEEECSS
T ss_pred EEEEccch------hcccC----------------HHHHHHHHHHhc----CCCCEEEEEEcCcc
Confidence 99975331 11111 134677777776 99999999876543
No 181
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.90 E-value=6.6e-09 Score=99.01 Aligned_cols=131 Identities=11% Similarity=0.033 Sum_probs=96.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
++.+|||+|||+|..+..++. ....|+++|+++..++.+++++...+. .++.+...|+..++. ...||+|++.
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~fD~v~~~ 139 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP---TELFDLIFDY 139 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC---SSCEEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC---CCCeeEEEEC
Confidence 345999999999999987765 346899999999999999999987654 569999999988752 3689999973
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc-------CCHHHHHHHHH
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT-------ENEAVIDYALK 329 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e-------ENE~vV~~~L~ 329 (496)
.. +.. ....+ ...+|..+.++| +|||+|+..+.+.... -..+.+..++.
T Consensus 140 ~~------l~~-------~~~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 195 (235)
T 3lcc_A 140 VF------FCA-------IEPEM-------RPAWAKSMYELL----KPDGELITLMYPITDHVGGPPYKVDVSTFEEVLV 195 (235)
T ss_dssp SS------TTT-------SCGGG-------HHHHHHHHHHHE----EEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHG
T ss_pred hh------hhc-------CCHHH-------HHHHHHHHHHHC----CCCcEEEEEEecccccCCCCCccCCHHHHHHHHH
Confidence 22 111 11111 234677777776 9999999877665432 24667777888
Q ss_pred hCCcEEeec
Q 010971 330 KRDVKLVPC 338 (496)
Q Consensus 330 ~~~~~lv~~ 338 (496)
..+|+++.+
T Consensus 196 ~~Gf~~~~~ 204 (235)
T 3lcc_A 196 PIGFKAVSV 204 (235)
T ss_dssp GGTEEEEEE
T ss_pred HcCCeEEEE
Confidence 878877664
No 182
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.90 E-value=2e-09 Score=102.56 Aligned_cols=117 Identities=17% Similarity=0.200 Sum_probs=85.5
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC-CCccccC-CCCcCEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLG-LNTVDRV 253 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~-~~~~~~~-~~~fD~V 253 (496)
+.++.+|||+|||+|..+.+++.. ...|+++|+++..++.++++ ..++.++..|+. .++ +. .+.||+|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~--~~~~~~fD~v 115 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELP--AGLGAPFGLI 115 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCC--TTCCCCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccC--CcCCCCEEEE
Confidence 467899999999999999988876 36999999999999999888 457889999984 444 22 4789999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~ 333 (496)
++... +..+|..+.++| +|||+|+..... .+...+...+...++
T Consensus 116 ~~~~~----------------------------~~~~l~~~~~~L----kpgG~l~~~~~~----~~~~~~~~~l~~~Gf 159 (226)
T 3m33_A 116 VSRRG----------------------------PTSVILRLPELA----APDAHFLYVGPR----LNVPEVPERLAAVGW 159 (226)
T ss_dssp EEESC----------------------------CSGGGGGHHHHE----EEEEEEEEEESS----SCCTHHHHHHHHTTC
T ss_pred EeCCC----------------------------HHHHHHHHHHHc----CCCcEEEEeCCc----CCHHHHHHHHHHCCC
Confidence 98511 122456666665 999999933222 233456667777776
Q ss_pred EEeec
Q 010971 334 KLVPC 338 (496)
Q Consensus 334 ~lv~~ 338 (496)
..+.+
T Consensus 160 ~~~~~ 164 (226)
T 3m33_A 160 DIVAE 164 (226)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 65543
No 183
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.90 E-value=8e-09 Score=102.39 Aligned_cols=132 Identities=16% Similarity=0.178 Sum_probs=82.9
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeC-CHHHHHHHHHHH-----HHcCCC-----eEEEEecCCCCCcccc
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEM-KASRLKSLTANL-----HRMGVT-----NTIVCNYDGNELPKVL 245 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~-s~~rl~~l~~nl-----~r~g~~-----nv~v~~~D~~~~~~~~ 245 (496)
.+|.+|||+|||+|..++.++.. +.+.|+++|+ ++..++.++.|+ ...|+. ++.+...|.......+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 57889999999999999887764 3358999999 899999999999 666664 6777765544321111
Q ss_pred ----CCCCcCEEEE-CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCC---C--CcEEEEEeCCC
Q 010971 246 ----GLNTVDRVLL-DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSK---S--GGYIVYSTCSI 315 (496)
Q Consensus 246 ----~~~~fD~VLl-DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lk---p--GG~LVYSTCSi 315 (496)
....||+|++ |+... ..+ ...+|..+.++| + | ||.++.+.+..
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~----------------~~~-------~~~ll~~l~~~L----k~~~p~~gG~l~v~~~~~ 208 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSF----------------HQA-------HDALLRSVKMLL----ALPANDPTAVALVTFTHH 208 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSC----------------GGG-------HHHHHHHHHHHB----CCTTTCTTCEEEEEECC-
T ss_pred HhhccCCCCCEEEEeCcccC----------------hHH-------HHHHHHHHHHHh----cccCCCCCCEEEEEEEee
Confidence 2468999987 65521 111 234566666665 8 8 99766544433
Q ss_pred CC---cCCHHHHHHHHHhCC-cEEeec
Q 010971 316 MV---TENEAVIDYALKKRD-VKLVPC 338 (496)
Q Consensus 316 ~~---eENE~vV~~~L~~~~-~~lv~~ 338 (496)
.+ +..+.++. .+...+ +++..+
T Consensus 209 ~~~~~~~~~~~~~-~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 209 RPHLAERDLAFFR-LVNADGALIAEPW 234 (281)
T ss_dssp -------CTHHHH-HHHHSTTEEEEEE
T ss_pred ecccchhHHHHHH-HHHhcCCEEEEEe
Confidence 22 22334443 456677 777654
No 184
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.90 E-value=1.2e-09 Score=114.60 Aligned_cols=82 Identities=12% Similarity=0.052 Sum_probs=69.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+|.+|||+|||+|..+++++.. .+.|+++|+|+.+++.++.|++.+ |+.++.++++|+..+........||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 5899999999999999988765 369999999999999999999999 99889999999987522211257999999
Q ss_pred CCCCCCC
Q 010971 256 DAPCSGT 262 (496)
Q Consensus 256 DaPCSg~ 262 (496)
|||..+.
T Consensus 170 DPPrr~~ 176 (410)
T 3ll7_A 170 DPARRSG 176 (410)
T ss_dssp CCEEC--
T ss_pred CCCCcCC
Confidence 9998774
No 185
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.89 E-value=4.2e-09 Score=103.87 Aligned_cols=91 Identities=19% Similarity=0.080 Sum_probs=73.5
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCH-------HHHHHHHHHHHHcCCCe-EEEEecCC
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKA-------SRLKSLTANLHRMGVTN-TIVCNYDG 238 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~-------~rl~~l~~nl~r~g~~n-v~v~~~D~ 238 (496)
..+...++.+.+|.+|||+|||+|..|+.+|.. .+.|+++|+++ ..++.+++|++.+|+.+ +.+++.|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 345555666677899999999999999999985 36899999999 99999999999988876 99999998
Q ss_pred CCCccccCC--CCcCEEEECCCCC
Q 010971 239 NELPKVLGL--NTVDRVLLDAPCS 260 (496)
Q Consensus 239 ~~~~~~~~~--~~fD~VLlDaPCS 260 (496)
..+...+.. ..||+|++|||..
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC-
T ss_pred HHHHHhhhccCCCccEEEECCCCC
Confidence 765322222 5799999999854
No 186
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=1.6e-08 Score=99.08 Aligned_cols=110 Identities=20% Similarity=0.193 Sum_probs=83.1
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~ 248 (496)
.....+.+.++.+|||+|||+|..+..++. ..+.|+++|+++..++.+++++ .++.+...|+..++. .+
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV---DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC---SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc---CC
Confidence 344566778899999999999999999988 3479999999999999988765 567788899988763 37
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.||+|++... +. +... ...+|..+.++| +|||+|+.++...
T Consensus 117 ~fD~v~~~~~------l~------~~~d----------~~~~l~~~~~~L----kpgG~l~~~~~~~ 157 (279)
T 3ccf_A 117 PLDAVFSNAM------LH------WVKE----------PEAAIASIHQAL----KSGGRFVAEFGGK 157 (279)
T ss_dssp CEEEEEEESC------GG------GCSC----------HHHHHHHHHHHE----EEEEEEEEEEECT
T ss_pred CcCEEEEcch------hh------hCcC----------HHHHHHHHHHhc----CCCcEEEEEecCC
Confidence 8999997432 11 1011 124577777776 9999999877543
No 187
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.87 E-value=7.5e-09 Score=101.17 Aligned_cols=140 Identities=14% Similarity=0.069 Sum_probs=88.7
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC--C------------------------
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG--V------------------------ 228 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g--~------------------------ 228 (496)
.+.+|.+|||+|||+|..+..++.. +...|+|+|+|+..++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567899999999999877654433 22479999999999999998876532 1
Q ss_pred ---CeEE-EEecCCCCCccc--cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 010971 229 ---TNTI-VCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANS 302 (496)
Q Consensus 229 ---~nv~-v~~~D~~~~~~~--~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~l 302 (496)
.++. +...|....... ...+.||+|++- .....+.........+|.++.++|
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~------------------~~l~~i~~~~~~~~~~l~~i~r~L---- 187 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTL------------------LAMECACCSLDAYRAALCNLASLL---- 187 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE------------------SCHHHHCSSHHHHHHHHHHHHTTE----
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeeh------------------HHHHHhcCCHHHHHHHHHHHHHHc----
Confidence 1243 778888763211 113689999871 111111000011234677777765
Q ss_pred CCCcEEEEEeCCCCC------------cCCHHHHHHHHHhCCcEEeec
Q 010971 303 KSGGYIVYSTCSIMV------------TENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 303 kpGG~LVYSTCSi~~------------eENE~vV~~~L~~~~~~lv~~ 338 (496)
||||+|+.++..-.. -=.++.+..+|...+++++.+
T Consensus 188 KPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 188 KPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp EEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEE
Confidence 999999999742110 014556667777777776654
No 188
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.86 E-value=4.7e-09 Score=107.49 Aligned_cols=113 Identities=12% Similarity=0.054 Sum_probs=86.4
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
+.++.+|||+|||+|..+..+++. +.+.|+|+|++ ..++.+++++...|+.+ +.++.+|+..++ ++.+.||+|+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~Ii 138 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE--LPVEKVDIII 138 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSSCEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc--CCCCceEEEE
Confidence 457899999999999999998886 44699999999 59999999999999977 999999998875 3347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
++.+..... + . .. ...+|..+.++| +|||+|+.+.+++.
T Consensus 139 s~~~~~~l~----~-----~---~~-------~~~~l~~~~r~L----kpgG~li~~~~~~~ 177 (349)
T 3q7e_A 139 SEWMGYCLF----Y-----E---SM-------LNTVLHARDKWL----APDGLIFPDRATLY 177 (349)
T ss_dssp ECCCBBTBT----B-----T---CC-------HHHHHHHHHHHE----EEEEEEESCEEEEE
T ss_pred Ecccccccc----C-----c---hh-------HHHHHHHHHHhC----CCCCEEccccceEE
Confidence 986422210 0 0 01 123566666665 99999987776643
No 189
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.86 E-value=7.4e-09 Score=96.35 Aligned_cols=115 Identities=14% Similarity=0.133 Sum_probs=82.2
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
.+.++.+|||+|||+|..+..++.. +...|+++|+++..++.++.|+. ++.++..|+..++ +.||+|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~-----~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS-----GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC-----CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC-----CCeeEEE
Confidence 4568899999999999999998876 34579999999999999999876 6788899987764 5799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRD 332 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~ 332 (496)
+|+|..... . .....++..+++.+ |+ +|+.|.. .....+...+...+
T Consensus 116 ~~~p~~~~~--------------~------~~~~~~l~~~~~~~------g~--~~~~~~~---~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 116 MNPPFGSVV--------------K------HSDRAFIDKAFETS------MW--IYSIGNA---KARDFLRREFSARG 162 (200)
T ss_dssp ECCCC---------------------------CHHHHHHHHHHE------EE--EEEEEEG---GGHHHHHHHHHHHE
T ss_pred ECCCchhcc--------------C------chhHHHHHHHHHhc------Cc--EEEEEcC---chHHHHHHHHHHCC
Confidence 999953211 0 11234577777653 33 6777743 33455555565554
No 190
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.86 E-value=9.3e-09 Score=97.67 Aligned_cols=108 Identities=17% Similarity=0.198 Sum_probs=81.4
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. ..|+++|+++..++.+++++...+ .++.+...|+..++. . +.||+|++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~--~-~~fD~v~~~ 103 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL--P-EPVDAITIL 103 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC--S-SCEEEEEEC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC--C-CCcCEEEEe
Confidence 45789999999999999887765 689999999999999999998887 468888899877652 2 689999985
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.. ++ .+..+..+ ...+|..+.++| +|||+|+.++.+
T Consensus 104 ~~-----~~------~~~~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~~ 139 (243)
T 3d2l_A 104 CD-----SL------NYLQTEAD-------VKQTFDSAARLL----TDGGKLLFDVHS 139 (243)
T ss_dssp TT-----GG------GGCCSHHH-------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred CC-----ch------hhcCCHHH-------HHHHHHHHHHhc----CCCeEEEEEcCC
Confidence 31 11 11112222 245677777776 999999987655
No 191
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.86 E-value=6.1e-09 Score=104.59 Aligned_cols=137 Identities=13% Similarity=0.100 Sum_probs=91.7
Q ss_pred ccccccEEEeCCcc-----hhH--HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc
Q 010971 154 EYMAGFYMLQSASS-----FLP--VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM 226 (496)
Q Consensus 154 ~~~~G~~~iQd~sS-----~l~--v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~ 226 (496)
.+..|.+......- +++ +++.. ....+|||+|||+|+.+..++... +...|+++|+|+..++.+++++..+
T Consensus 53 L~ldg~~~~~~~de~~Y~e~l~~~~l~~~-~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~ 130 (294)
T 3adn_A 53 MALDGVVQTTERDEFIYHEMMTHVPLLAH-GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNH 130 (294)
T ss_dssp EEETTEEEEETTTHHHHHHHHHHHHHHHS-TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHH
T ss_pred EEECCeEeeccCchhHHHHHHHHHHHhcC-CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhc
Confidence 45667666654331 222 22223 346799999999999999888753 3468999999999999999998876
Q ss_pred C-----CCeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhc
Q 010971 227 G-----VTNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDAN 301 (496)
Q Consensus 227 g-----~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~ 301 (496)
+ -.++.++.+|+..+... ..+.||+|++|+|... | |.. .....+++..+.+.|
T Consensus 131 ~~~~~~~~rv~~~~~D~~~~l~~-~~~~fDvIi~D~~~p~-~-----~~~------------~l~~~~f~~~~~~~L--- 188 (294)
T 3adn_A 131 NAGSYDDPRFKLVIDDGVNFVNQ-TSQTFDVIISDCTDPI-G-----PGE------------SLFTSAFYEGCKRCL--- 188 (294)
T ss_dssp HSSCTTCTTCCEECSCSCC---C-CCCCEEEEEECC----------------------------CCHHHHHHHHHTE---
T ss_pred ccccccCCceEEEEChHHHHHhh-cCCCccEEEECCCCcc-C-----cch------------hccHHHHHHHHHHhc---
Confidence 3 34689999999876432 2368999999987311 1 000 001144677777776
Q ss_pred CCCCcEEEEEeCCC
Q 010971 302 SKSGGYIVYSTCSI 315 (496)
Q Consensus 302 lkpGG~LVYSTCSi 315 (496)
+|||+||..++|.
T Consensus 189 -kpgG~lv~~~~s~ 201 (294)
T 3adn_A 189 -NPGGIFVAQNGVC 201 (294)
T ss_dssp -EEEEEEEEEEEEC
T ss_pred -CCCCEEEEecCCc
Confidence 9999999887664
No 192
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.85 E-value=2e-08 Score=96.31 Aligned_cols=109 Identities=18% Similarity=0.123 Sum_probs=82.7
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
...++.+|||+|||+|..+..++.. ...|+++|+|+..++.+++++...+. ++.++..|+..++. .+.||.|+
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~---~~~fD~v~ 110 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF---KNEFDAVT 110 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC---CSCEEEEE
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhccc---CCCccEEE
Confidence 3467889999999999999998875 35899999999999999999998887 68889999887652 26799999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
+... .... .+.. ....+|..+.+.| +|||.++..+.
T Consensus 111 ~~~~--~~~~----------~~~~-------~~~~~l~~~~~~L----~pgG~li~~~~ 146 (252)
T 1wzn_A 111 MFFS--TIMY----------FDEE-------DLRKLFSKVAEAL----KPGGVFITDFP 146 (252)
T ss_dssp ECSS--GGGG----------SCHH-------HHHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred EcCC--chhc----------CCHH-------HHHHHHHHHHHHc----CCCeEEEEecc
Confidence 6311 1110 1111 2345677777776 99999987653
No 193
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.84 E-value=9.2e-09 Score=103.45 Aligned_cols=113 Identities=12% Similarity=0.107 Sum_probs=76.8
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC------eEEEEecCCC------CCccc
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT------NTIVCNYDGN------ELPKV 244 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~------nv~v~~~D~~------~~~~~ 244 (496)
.+|.+|||+|||+|+-+..++.. +.+.|+|+|+|+..++.++++....+.. ++.+...|.. .++..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~ 124 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV 124 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT
T ss_pred CCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc
Confidence 35889999999999866655442 3468999999999999999998887754 3556666662 22222
Q ss_pred cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 245 ~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+..+.||+|+|-- . + .+.+...+ +..+|.++.++| +|||+++.+|+.
T Consensus 125 ~~~~~FD~V~~~~-----~-l------hy~~~~~~-------~~~~l~~~~r~L----kpGG~~i~~~~~ 171 (302)
T 2vdw_A 125 FYFGKFNIIDWQF-----A-I------HYSFHPRH-------YATVMNNLSELT----ASGGKVLITTMD 171 (302)
T ss_dssp CCSSCEEEEEEES-----C-G------GGTCSTTT-------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred ccCCCeeEEEECc-----h-H------HHhCCHHH-------HHHHHHHHHHHc----CCCCEEEEEeCC
Confidence 3347899998621 1 1 11111111 135688888876 999999998875
No 194
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.83 E-value=1.3e-08 Score=97.80 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=81.6
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
.+.++.+|||+|||+|..+..++.. .+.|+++|+|+..++.+++++ ..+..++.+...|+..++ +..+.||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~--~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIP--LPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCC--SCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCC--CCCCCeeEEE
Confidence 5678999999999999999988875 368999999999999999988 445678999999998776 3347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
+... +..-+ . ...+|..+.++| +|||+|+.+
T Consensus 110 ~~~~------l~~~~------~----------~~~~l~~~~~~L----~pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHL------WHLVP------D----------WPKVLAEAIRVL----KPGGALLEG 140 (263)
T ss_dssp EESC------GGGCT------T----------HHHHHHHHHHHE----EEEEEEEEE
T ss_pred ECCc------hhhcC------C----------HHHHHHHHHHHC----CCCcEEEEE
Confidence 8422 11101 1 134677777776 999999887
No 195
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.83 E-value=1.1e-08 Score=98.35 Aligned_cols=140 Identities=14% Similarity=0.098 Sum_probs=93.4
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC--------------------------
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-------------------------- 228 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-------------------------- 228 (496)
...+|.+|||+|||+|..+..++... ...|+++|+++..++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 34578899999999999988777542 14899999999999999998866431
Q ss_pred ---CeE-EEEecCCCCCccc--cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 010971 229 ---TNT-IVCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANS 302 (496)
Q Consensus 229 ---~nv-~v~~~D~~~~~~~--~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~l 302 (496)
.++ .+...|+...+.. ...+.||+|++.- + ...+.........+|..+.++|
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~------~------------l~~~~~~~~~~~~~l~~~~~~L---- 188 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTL------C------------LDAACPDLPAYRTALRNLGSLL---- 188 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES------C------------HHHHCSSHHHHHHHHHHHHTTE----
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEhh------h------------hhhhcCChHHHHHHHHHHHhhC----
Confidence 126 7888898775321 1126899999731 1 1100001123355677777776
Q ss_pred CCCcEEEEEeCCC------------CCcCCHHHHHHHHHhCCcEEeec
Q 010971 303 KSGGYIVYSTCSI------------MVTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 303 kpGG~LVYSTCSi------------~~eENE~vV~~~L~~~~~~lv~~ 338 (496)
+|||+|+.++..- ...-+++.+..+|...+++++.+
T Consensus 189 kpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 189 KPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp EEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEE
Confidence 9999999887321 11124566777777778777654
No 196
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.83 E-value=3.9e-09 Score=107.12 Aligned_cols=113 Identities=15% Similarity=0.133 Sum_probs=84.8
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~V 253 (496)
...++.+|||+|||+|..+..+++. +...|+|+|++ ..+..+++++...|+.+ +.++..|+..++ ++.+.||+|
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~I 109 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--LPFPKVDII 109 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--CSSSCEEEE
T ss_pred hhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--CCCCcccEE
Confidence 3457899999999999999988875 34689999999 68999999999999864 999999998875 233689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+++++..... + ... ...+|..+.++| +|||+|+.++|++
T Consensus 110 vs~~~~~~l~----~--------~~~-------~~~~l~~~~~~L----kpgG~li~~~~~~ 148 (328)
T 1g6q_1 110 ISEWMGYFLL----Y--------ESM-------MDTVLYARDHYL----VEGGLIFPDKCSI 148 (328)
T ss_dssp EECCCBTTBS----T--------TCC-------HHHHHHHHHHHE----EEEEEEESCEEEE
T ss_pred EEeCchhhcc----c--------HHH-------HHHHHHHHHhhc----CCCeEEEEeeceE
Confidence 9987633221 0 001 123455555665 9999998666654
No 197
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.82 E-value=1.5e-08 Score=95.97 Aligned_cols=126 Identities=10% Similarity=0.097 Sum_probs=90.8
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++... ..|+++|+++..++.+++++.. ++.++..|+..++ ..+.||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~---~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQ---LPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCC---CSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcC---cCCcccEEEEh
Confidence 468899999999999999888753 3799999999999998887644 7888899987763 34789999973
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHH-HhhhhcCCCCcEEEEEeCCCCC------------------
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAI-DMVDANSKSGGYIVYSTCSIMV------------------ 317 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~-~~l~~~lkpGG~LVYSTCSi~~------------------ 317 (496)
+++..-++ ...+|..+. ++| +|||+|+.++.....
T Consensus 111 ------~~l~~~~~----------------~~~~l~~~~~~~L----kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (250)
T 2p7i_A 111 ------HVLEHIDD----------------PVALLKRINDDWL----AEGGRLFLVCPNANAVSRQIAVKMGIISHNSAV 164 (250)
T ss_dssp ------SCGGGCSS----------------HHHHHHHHHHTTE----EEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCC
T ss_pred ------hHHHhhcC----------------HHHHHHHHHHHhc----CCCCEEEEEcCChHHHHHHHHHHcCccccchhc
Confidence 22221111 124677777 775 999999998844221
Q ss_pred -----------cCCHHHHHHHHHhCCcEEeec
Q 010971 318 -----------TENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 318 -----------eENE~vV~~~L~~~~~~lv~~ 338 (496)
.=+..-+..+|+..+++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 165 TEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp CHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 114456667777778877765
No 198
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.82 E-value=5.8e-09 Score=104.86 Aligned_cols=115 Identities=15% Similarity=0.170 Sum_probs=83.0
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc----CCCeEEEEecCCCCCccccCCCCcCE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM----GVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~----g~~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
.++.+|||+|||+|+.+..++... +...|+++|+++..++.+++++..+ .-.++.++..|+..++.....+.||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 467899999999999999888653 3469999999999999999988542 23568999999987653212478999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
|++|++... + | ...+ .+.+++..+.+.| +|||+|+..+.+
T Consensus 173 Ii~d~~~~~-~-----~-------~~~l-----~~~~~l~~~~~~L----kpgG~lv~~~~~ 212 (304)
T 3bwc_A 173 VIIDTTDPA-G-----P-------ASKL-----FGEAFYKDVLRIL----KPDGICCNQGES 212 (304)
T ss_dssp EEEECC---------------------------CCHHHHHHHHHHE----EEEEEEEEEECC
T ss_pred EEECCCCcc-c-----c-------chhh-----hHHHHHHHHHHhc----CCCcEEEEecCC
Confidence 999987311 0 0 0000 1245677777776 999999987654
No 199
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.80 E-value=6.7e-09 Score=98.68 Aligned_cols=111 Identities=16% Similarity=0.140 Sum_probs=82.7
Q ss_pred HHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCC
Q 010971 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~ 249 (496)
...++...++.+|||+|||+|..+..++.. +.+.|+++|+++..++.+++++.. .++.+...|+..++ +..+.
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~--~~~~~ 107 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH--LPQDS 107 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC--CCTTC
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc--CCCCC
Confidence 445566678999999999999999988876 324899999999999988877643 36888899987765 33478
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
||+|++... +..-+ . ...+|..+.++| +|||+|++++.
T Consensus 108 fD~v~~~~~------l~~~~------~----------~~~~l~~~~~~L----~pgG~l~~~~~ 145 (243)
T 3bkw_A 108 FDLAYSSLA------LHYVE------D----------VARLFRTVHQAL----SPGGHFVFSTE 145 (243)
T ss_dssp EEEEEEESC------GGGCS------C----------HHHHHHHHHHHE----EEEEEEEEEEE
T ss_pred ceEEEEecc------ccccc------h----------HHHHHHHHHHhc----CcCcEEEEEeC
Confidence 999997432 11111 0 134677777776 99999999873
No 200
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.80 E-value=4.1e-08 Score=109.70 Aligned_cols=110 Identities=17% Similarity=0.167 Sum_probs=83.8
Q ss_pred CCCcccccccEEEeCCcch---hH---HHhcCCCCCCeEeeccCCCchHHHHHHHHcC----------------------
Q 010971 150 GATPEYMAGFYMLQSASSF---LP---VMALAPQEKERVIDMAAAPGGKTTYIAALMK---------------------- 201 (496)
Q Consensus 150 ~~~~~~~~G~~~iQd~sS~---l~---v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~---------------------- 201 (496)
...+.++.|+-..+..+.+ ++ +.+..+.++..|||.|||+|+..+.+|....
T Consensus 156 sg~~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~ 235 (703)
T 3v97_A 156 SGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEA 235 (703)
T ss_dssp SSSCTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHH
T ss_pred CCCccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHH
Confidence 3445677776555554442 22 2334567899999999999999988776542
Q ss_pred -------------------CCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEEECCCC
Q 010971 202 -------------------NTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 202 -------------------~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VLlDaPC 259 (496)
....|+++|+++..++.++.|+.+.|+.+ +.+.+.|+..+......+.||+|++|||+
T Consensus 236 ~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 236 IWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPY 313 (703)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCc
Confidence 12579999999999999999999999987 89999999877432222389999999997
No 201
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.80 E-value=3.7e-08 Score=95.36 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=76.9
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++. ++.++..|+..++. .+.||+|++.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~---~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL---GRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC---SCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc---cCCcCEEEEc
Confidence 46789999999999999888775 2589999999999999988753 67888999988764 3789999974
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.. ++. +..++.+ ...+|..+.++| +|||+|+.++.
T Consensus 118 ~~-----~l~------~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~~~ 152 (263)
T 3pfg_A 118 FS-----SIG------HLAGQAE-------LDAALERFAAHV----LPDGVVVVEPW 152 (263)
T ss_dssp TT-----GGG------GSCHHHH-------HHHHHHHHHHTE----EEEEEEEECCC
T ss_pred Cc-----hhh------hcCCHHH-------HHHHHHHHHHhc----CCCcEEEEEec
Confidence 21 111 1111122 245677777776 99999998643
No 202
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.80 E-value=9.1e-08 Score=95.88 Aligned_cols=116 Identities=20% Similarity=0.135 Sum_probs=88.8
Q ss_pred hcCC--CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCC
Q 010971 173 ALAP--QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 173 ~L~~--~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~ 249 (496)
.++. .++.+|||+|||+|..+..++...++ ..++++|++ ..++.+++++...|+.+ +.+...|+...+ ++ ..
T Consensus 158 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~-~~ 232 (335)
T 2r3s_A 158 LVNENKIEPLKVLDISASHGLFGIAVAQHNPN-AEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD--YG-ND 232 (335)
T ss_dssp HHTC--CCCSEEEEETCTTCHHHHHHHHHCTT-CEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC--CC-SC
T ss_pred hcccccCCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC--CC-CC
Confidence 3455 67899999999999999999998753 699999999 99999999999999864 999999987653 22 45
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
||+|++--. ...++..+ ..++|.++.+.| +|||+|+..+.....
T Consensus 233 ~D~v~~~~~-------------l~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 233 YDLVLLPNF-------------LHHFDVAT-------CEQLLRKIKTAL----AVEGKVIVFDFIPNS 276 (335)
T ss_dssp EEEEEEESC-------------GGGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEECCCCT
T ss_pred CcEEEEcch-------------hccCCHHH-------HHHHHHHHHHhC----CCCcEEEEEeecCCC
Confidence 999998211 11222222 245778888876 999999888766543
No 203
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.79 E-value=1.2e-07 Score=96.79 Aligned_cols=113 Identities=20% Similarity=0.147 Sum_probs=87.2
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~ 249 (496)
...++..++.+|||+|||+|..+..++...+ ...++++|+ +..++.+++++...|+. ++.+...|+... ++ ..
T Consensus 175 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~-~~ 248 (374)
T 1qzz_A 175 ADAYDWSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP---LP-VT 248 (374)
T ss_dssp HHTSCCTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CS-CC
T ss_pred HHhCCCCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---CC-CC
Confidence 3445667889999999999999999999875 468999999 99999999999999986 699999998651 22 34
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
||+|++... + ..+...+ ...+|.++.+.| +|||+|+.++.
T Consensus 249 ~D~v~~~~v------l-------~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~ 288 (374)
T 1qzz_A 249 ADVVLLSFV------L-------LNWSDED-------ALTILRGCVRAL----EPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEESC------G-------GGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEC
T ss_pred CCEEEEecc------c-------cCCCHHH-------HHHHHHHHHHhc----CCCcEEEEEec
Confidence 999998422 1 1122221 245788888876 99999998876
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.79 E-value=3.9e-09 Score=107.92 Aligned_cols=118 Identities=15% Similarity=0.204 Sum_probs=86.4
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--CeEEEEecCCCCCccccCCCCcC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
...+.+|||+|||+|+.+..++... +...|+++|+|+..++.+++++.++ |+ .++.++.+|+..+......+.||
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 3456899999999999999888753 3469999999999999999999875 44 46999999987653222236899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+|++|++.. .+. + .. ....+++..+.++| +|||.|+..+.+..
T Consensus 197 lIi~d~~~p-~~~----~--------~~-----l~~~~~l~~~~~~L----kpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 197 AVIVDSSDP-IGP----A--------KE-----LFEKPFFQSVARAL----RPGGVVCTQAESLW 239 (334)
T ss_dssp EEEECCCCT-TSG----G--------GG-----GGSHHHHHHHHHHE----EEEEEEEEECCCTT
T ss_pred EEEECCCCc-cCc----c--------hh-----hhHHHHHHHHHHhc----CCCcEEEEecCCcc
Confidence 999998621 110 0 00 01245677777776 99999999765543
No 205
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.79 E-value=6.6e-09 Score=107.51 Aligned_cols=113 Identities=16% Similarity=0.081 Sum_probs=86.0
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCE
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~ 252 (496)
+...++.+|||+|||+|..+..+++. +...|+|+|++ ..++.+++++..+|+.+ +.++..|+..++. + +.||+
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~-~~~D~ 132 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL--P-EKVDV 132 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--S-SCEEE
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--C-CcceE
Confidence 34568999999999999999998886 33599999999 99999999999999976 8999999987752 2 78999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|++++...... +. .. ...+|..+.++| +|||+|+.+.+++
T Consensus 133 Iv~~~~~~~l~----~e--------~~-------~~~~l~~~~~~L----kpgG~li~~~~~~ 172 (376)
T 3r0q_C 133 IISEWMGYFLL----RE--------SM-------FDSVISARDRWL----KPTGVMYPSHARM 172 (376)
T ss_dssp EEECCCBTTBT----TT--------CT-------HHHHHHHHHHHE----EEEEEEESSEEEE
T ss_pred EEEcChhhccc----ch--------HH-------HHHHHHHHHhhC----CCCeEEEEecCeE
Confidence 99976322110 00 00 123455555665 9999999877764
No 206
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.78 E-value=6.3e-09 Score=102.99 Aligned_cols=106 Identities=16% Similarity=0.132 Sum_probs=71.8
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC------eEEEE--ecCCCCCccccCC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT------NTIVC--NYDGNELPKVLGL 247 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~------nv~v~--~~D~~~~~~~~~~ 247 (496)
+.+|.+|||+|||||+.|.++++. +.|+|+|+++ .+..+ +..... ++.++ ..|+..++ .
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a----~~~~~~~~~~~~~v~~~~~~~D~~~l~----~ 138 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGG----HEVPRITESYGWNIVKFKSRVDIHTLP----V 138 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSS----CCCCCCCCBTTGGGEEEECSCCTTTSC----C
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhh----hhhhhhhhccCCCeEEEecccCHhHCC----C
Confidence 568999999999999999988875 6899999998 22111 111122 67888 88998876 2
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc--EEEEEeCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG--YIVYSTCS 314 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG--~LVYSTCS 314 (496)
..||+|++|.. ..+|. +. .+... +..+|..+.++| +||| .+|..+..
T Consensus 139 ~~fD~V~sd~~-~~~~~----~~------~d~~~-----~l~~L~~~~r~L----kpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 139 ERTDVIMCDVG-ESSPK----WS------VESER-----TIKILELLEKWK----VKNPSADFVVKVLC 187 (265)
T ss_dssp CCCSEEEECCC-CCCSC----HH------HHHHH-----HHHHHHHHHHHH----HHCTTCEEEEEESC
T ss_pred CCCcEEEEeCc-ccCCc----cc------hhHHH-----HHHHHHHHHHHh----ccCCCeEEEEEeCC
Confidence 68999999976 33331 11 01110 112566676766 9999 88876644
No 207
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.78 E-value=1.7e-08 Score=99.92 Aligned_cols=126 Identities=14% Similarity=0.102 Sum_probs=79.8
Q ss_pred HHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCC
Q 010971 170 PVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 170 ~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~ 249 (496)
....+.+.+|.+|||+|||+|..+..++.. .+.|+|+|+|+.+++.+++++... +-+..+...+.. .+... .+.
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~-~~~~~-~~~ 110 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAE-IPKEL-AGH 110 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSC-CCGGG-TTC
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccc-ccccc-CCC
Confidence 345667889999999999999999999875 368999999999999999998765 222223222220 11111 368
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHH
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDY 326 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~ 326 (496)
||+|+++.. + ..+...+ ...+|....++ | |||+|+.|..--..+-+..++..
T Consensus 111 fD~Vv~~~~------l-------~~~~~~~-------~~~~l~~l~~l----L-PGG~l~lS~~~g~~~~d~~~l~~ 162 (261)
T 3iv6_A 111 FDFVLNDRL------I-------NRFTTEE-------ARRACLGMLSL----V-GSGTVRASVKLGFYDIDLKLIEY 162 (261)
T ss_dssp CSEEEEESC------G-------GGSCHHH-------HHHHHHHHHHH----H-TTSEEEEEEEBSCCHHHHHHHHH
T ss_pred ccEEEEhhh------h-------HhCCHHH-------HHHHHHHHHHh----C-cCcEEEEEeccCcccccHHHHHH
Confidence 999998653 1 1122222 23345555554 6 99999877543332333334443
No 208
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.78 E-value=8e-09 Score=105.63 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=85.3
Q ss_pred hcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcC
Q 010971 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
.+...++.+|||+|||+|..+..++.. +.+.|+|+|+++ .+..++++++..|+ .++.++..|+..++. + +.||
T Consensus 45 ~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~--~-~~~D 118 (348)
T 2y1w_A 45 NHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL--P-EQVD 118 (348)
T ss_dssp TGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC--S-SCEE
T ss_pred ccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC--C-Ccee
Confidence 344568899999999999999988875 346999999996 88999999999998 579999999988752 2 5799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+|+++.+....+ ++ . ....+..+.++| +|||.|+.+++++.
T Consensus 119 ~Ivs~~~~~~~~----~~---------~-------~~~~l~~~~~~L----kpgG~li~~~~~~~ 159 (348)
T 2y1w_A 119 IIISEPMGYMLF----NE---------R-------MLESYLHAKKYL----KPSGNMFPTIGDVH 159 (348)
T ss_dssp EEEECCCBTTBT----TT---------S-------HHHHHHHGGGGE----EEEEEEESCEEEEE
T ss_pred EEEEeCchhcCC----hH---------H-------HHHHHHHHHhhc----CCCeEEEEecCcEE
Confidence 999986632211 00 0 122345555554 99999998777754
No 209
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.78 E-value=2.6e-08 Score=95.24 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=75.6
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..++.+|||+|||+|..+..++.. ...|+++|+|+..++.++++ +.++..|+..+...+..+.||+|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEE
Confidence 467899999999999999988886 25799999999999888776 5677778766422234578999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
. +++..-+ ..+ ...+|..+.++| +|||+|+.++..
T Consensus 108 ~------~~l~~~~-------~~~-------~~~~l~~~~~~L----kpgG~l~~~~~~ 142 (240)
T 3dli_A 108 S------HFVEHLD-------PER-------LFELLSLCYSKM----KYSSYIVIESPN 142 (240)
T ss_dssp E------SCGGGSC-------GGG-------HHHHHHHHHHHB----CTTCCEEEEEEC
T ss_pred C------CchhhCC-------cHH-------HHHHHHHHHHHc----CCCcEEEEEeCC
Confidence 3 2222111 111 134677777775 999999998765
No 210
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.77 E-value=5.2e-09 Score=99.15 Aligned_cols=108 Identities=13% Similarity=0.128 Sum_probs=79.2
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCcCEEEE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
.+.++|||+|||+|..++.++...+.. .++|+|+|+.+++.+++|+.++|+. ++.+ .|.... ...+.||+||+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH---HTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc---CCCCCcChhhH
Confidence 457799999999999999888776654 9999999999999999999999998 6777 343221 23477999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE-eCCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS-TCSIM 316 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS-TCSi~ 316 (496)
- . +..+...++..+...++.| +|||.+|-- |-|+.
T Consensus 122 ~------------------k----~LHlL~~~~~al~~v~~~L----~pggvfISfptksl~ 157 (200)
T 3fzg_A 122 L------------------K----MLPVLKQQDVNILDFLQLF----HTQNFVISFPIKSLS 157 (200)
T ss_dssp E------------------T----CHHHHHHTTCCHHHHHHTC----EEEEEEEEEECCCCC
T ss_pred h------------------h----HHHhhhhhHHHHHHHHHHh----CCCCEEEEeChHHhc
Confidence 1 1 1222233444555777776 999988743 44543
No 211
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.77 E-value=5.1e-09 Score=104.25 Aligned_cols=106 Identities=16% Similarity=0.084 Sum_probs=72.0
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC------eEEEE--ecCCCCCccccCC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT------NTIVC--NYDGNELPKVLGL 247 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~------nv~v~--~~D~~~~~~~~~~ 247 (496)
+.+|.+|||+|||||+.|..+++. +.|+|+|+++ .+..+ +..... ++.++ .+|+..++ .
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a----~~~~~~~~~~~~~v~~~~~~~D~~~l~----~ 146 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSG----HEKPRLVETFGWNLITFKSKVDVTKME----P 146 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTT----SCCCCCCCCTTGGGEEEECSCCGGGCC----C
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhh----hhchhhhhhcCCCeEEEeccCcHhhCC----C
Confidence 568999999999999999988876 6899999998 32111 111222 67888 88988765 3
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCc--EEEEEeCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGG--YIVYSTCS 314 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG--~LVYSTCS 314 (496)
+.||+|++|.. ..+|. +.+ +.. . +..+|..+.+.| +||| .++..+.+
T Consensus 147 ~~fD~Vvsd~~-~~~~~----~~~------d~~---~--~l~~L~~~~r~L----kpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 147 FQADTVLCDIG-ESNPT----AAV------EAS---R--TLTVLNVISRWL----EYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCSEEEECCC-CCCSC----HHH------HHH---H--HHHHHHHHHHHH----HHSTTCEEEEEESC
T ss_pred CCcCEEEECCC-cCCCc----hhh------hHH---H--HHHHHHHHHHHh----ccCCCcEEEEEeCC
Confidence 68999999976 33331 110 111 0 112566677766 9999 99886544
No 212
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.76 E-value=2.4e-08 Score=94.64 Aligned_cols=107 Identities=15% Similarity=0.184 Sum_probs=81.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDa 257 (496)
++.+|||+|||+|..+..++.. ...|+++|+++..++.+++++...+. ++.+...|+..++. . +.||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~--~-~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI--N-RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC--S-CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc--c-CCceEEEEcC
Confidence 7889999999999999988876 25899999999999999999998887 78888999877652 2 6899999742
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 258 PCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
- ++. +..+..+ ...+|..+.++| +|||+|+.++.
T Consensus 110 ~-----~l~------~~~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~ 143 (246)
T 1y8c_A 110 D-----STN------YIIDSDD-------LKKYFKAVSNHL----KEGGVFIFDIN 143 (246)
T ss_dssp T-----GGG------GCCSHHH-------HHHHHHHHHTTE----EEEEEEEEEEE
T ss_pred c-----ccc------ccCCHHH-------HHHHHHHHHHhc----CCCcEEEEEec
Confidence 0 111 1111122 245677777775 99999998654
No 213
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.75 E-value=2.8e-08 Score=92.90 Aligned_cols=104 Identities=15% Similarity=0.070 Sum_probs=74.2
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCC---ccccCCCCc
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL---PKVLGLNTV 250 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~---~~~~~~~~f 250 (496)
+...++.+|||+|||+|..+..++.. ...|+++|+++..++.++++ .++.+...|+..+ +. .....|
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~-~~~~~f 117 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKV-PVGKDY 117 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCS-CCCCCE
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccc-ccCCCc
Confidence 33456799999999999999988876 35899999999999988877 3445566666554 21 123459
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
|+|++..... .++ ...+|..+.++| +|||+|+.++..
T Consensus 118 D~v~~~~~l~-------~~~----------------~~~~l~~~~~~L----~pgG~l~~~~~~ 154 (227)
T 3e8s_A 118 DLICANFALL-------HQD----------------IIELLSAMRTLL----VPGGALVIQTLH 154 (227)
T ss_dssp EEEEEESCCC-------SSC----------------CHHHHHHHHHTE----EEEEEEEEEECC
T ss_pred cEEEECchhh-------hhh----------------HHHHHHHHHHHh----CCCeEEEEEecC
Confidence 9999854321 111 124577777776 999999998764
No 214
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.75 E-value=3.9e-08 Score=96.38 Aligned_cols=112 Identities=11% Similarity=0.045 Sum_probs=79.2
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH-----------------cCCCeEEEEecC
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR-----------------MGVTNTIVCNYD 237 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r-----------------~g~~nv~v~~~D 237 (496)
.+.++.+|||+|||+|..+..||+. ...|+|+|+|+..++.++++... ....++.+.++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 3467899999999999999999885 24899999999999988765431 012578999999
Q ss_pred CCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 238 GNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 238 ~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+..++... .+.||.|++-.. .-.+ ... ....++..+.++| +|||+|++.|..
T Consensus 142 ~~~l~~~~-~~~FD~V~~~~~---l~~l----------~~~-------~~~~~l~~~~~~L----kpGG~l~l~~~~ 193 (252)
T 2gb4_A 142 IFDLPRAN-IGKFDRIWDRGA---LVAI----------NPG-------DHDRYADIILSLL----RKEFQYLVAVLS 193 (252)
T ss_dssp TTTGGGGC-CCCEEEEEESSS---TTTS----------CGG-------GHHHHHHHHHHTE----EEEEEEEEEEEE
T ss_pred cccCCccc-CCCEEEEEEhhh---hhhC----------CHH-------HHHHHHHHHHHHc----CCCeEEEEEEEe
Confidence 98876421 268999986321 1111 111 1234567777776 999999866644
No 215
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.75 E-value=1.6e-08 Score=100.62 Aligned_cols=116 Identities=16% Similarity=0.220 Sum_probs=85.9
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC----CCeEEEEecCCCCCccccCCCCcCE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG----VTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g----~~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
.++.+|||+|||+|+.+..++... +...|+++|+++..++.+++++..++ -.++.++..|+..+.... .+.||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-CCCceE
Confidence 456899999999999999887653 34799999999999999999987653 357899999987653222 368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|++|++.. .| |.. .+ ...+++..+.+.| +|||.|+..+++..
T Consensus 155 Ii~d~~~~-~~-----~~~-------~l-----~~~~~l~~~~~~L----~pgG~lv~~~~~~~ 196 (283)
T 2i7c_A 155 IIVDSSDP-IG-----PAE-------TL-----FNQNFYEKIYNAL----KPNGYCVAQCESLW 196 (283)
T ss_dssp EEEECCCT-TT-----GGG-------GG-----SSHHHHHHHHHHE----EEEEEEEEECCCTT
T ss_pred EEEcCCCC-CC-----cch-------hh-----hHHHHHHHHHHhc----CCCcEEEEECCCcc
Confidence 99998642 11 110 00 1145677777776 99999999887643
No 216
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.75 E-value=1.8e-08 Score=99.02 Aligned_cols=123 Identities=15% Similarity=0.086 Sum_probs=86.1
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC----CeEEEEecCCCCCccc-c
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV----TNTIVCNYDGNELPKV-L 245 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~----~nv~v~~~D~~~~~~~-~ 245 (496)
...+...++.+|||+|||+|..+..++.. ...|+++|+|+..++.+++++...+. .++.+...|+..++.. +
T Consensus 50 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (293)
T 3thr_A 50 LGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP 126 (293)
T ss_dssp HHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC
T ss_pred HHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc
Confidence 34444567899999999999999999876 24899999999999999998865543 3577888888776521 2
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
..+.||+|++... ++..-++... +. .....+|..+.++| +|||+|+.+++.
T Consensus 127 ~~~~fD~V~~~g~-----~l~~~~~~~~--~~-------~~~~~~l~~~~~~L----kpgG~l~~~~~~ 177 (293)
T 3thr_A 127 AGDGFDAVICLGN-----SFAHLPDSKG--DQ-------SEHRLALKNIASMV----RPGGLLVIDHRN 177 (293)
T ss_dssp CTTCEEEEEECTT-----CGGGSCCSSS--SS-------HHHHHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred cCCCeEEEEEcCh-----HHhhcCcccc--CH-------HHHHHHHHHHHHHc----CCCeEEEEEeCC
Confidence 3478999997311 1111111000 00 11345788888876 999999998875
No 217
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.74 E-value=3.8e-08 Score=98.27 Aligned_cols=114 Identities=14% Similarity=0.136 Sum_probs=82.4
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-------CCCeEEEEecCCCCCcc--cc--
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-------GVTNTIVCNYDGNELPK--VL-- 245 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~-------g~~nv~v~~~D~~~~~~--~~-- 245 (496)
.++.+|||+|||+|..+..++.. +...|+++|+++..++.+++++... +..++.+++.|+..++. .+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 36889999999999999988873 3469999999999999999998876 45578999999987641 12
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhcc-CCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTS-KSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~-~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
..+.||+|++.-. +.|. -+.. ....+|..+.++| +|||+|+.+|...
T Consensus 111 ~~~~fD~V~~~~~------------l~~~~~~~~-------~~~~~l~~~~~~L----kpgG~li~~~~~~ 158 (313)
T 3bgv_A 111 PQMCFDICSCQFV------------CHYSFESYE-------QADMMLRNACERL----SPGGYFIGTTPNS 158 (313)
T ss_dssp TTCCEEEEEEETC------------GGGGGGSHH-------HHHHHHHHHHTTE----EEEEEEEEEEECH
T ss_pred CCCCEEEEEEecc------------hhhccCCHH-------HHHHHHHHHHHHh----CCCcEEEEecCCh
Confidence 2358999997321 1111 1111 1235677777776 9999999987653
No 218
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.74 E-value=1.9e-08 Score=107.69 Aligned_cols=112 Identities=16% Similarity=0.149 Sum_probs=82.6
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcCE
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
+...++.+|||+|||+|..+..++.. +...|+|+|+++ .++.+++++..+|+ .++.++..|+..++ + .+.||+
T Consensus 154 l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~-~~~fD~ 227 (480)
T 3b3j_A 154 HTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L-PEQVDI 227 (480)
T ss_dssp GGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C-SSCEEE
T ss_pred hhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--c-CCCeEE
Confidence 34457899999999999999988773 346999999998 89999999999999 57999999998764 2 257999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|++++| +.. +.. ......+..+.++| +|||+|+.+.+++
T Consensus 228 Ivs~~~----~~~---------~~~-------e~~~~~l~~~~~~L----kpgG~li~~~~~~ 266 (480)
T 3b3j_A 228 IISEPM----GYM---------LFN-------ERMLESYLHAKKYL----KPSGNMFPTIGDV 266 (480)
T ss_dssp EECCCC----HHH---------HTC-------HHHHHHHHHGGGGE----EEEEEEESCEEEE
T ss_pred EEEeCc----hHh---------cCc-------HHHHHHHHHHHHhc----CCCCEEEEEecee
Confidence 998766 100 000 01123444555554 9999999665553
No 219
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.74 E-value=2e-08 Score=97.73 Aligned_cols=106 Identities=18% Similarity=0.151 Sum_probs=79.4
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCc
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~f 250 (496)
...+.+.++.+|||+|||+|..+..++. ..+.|+++|+|+..+..++.+. ++.+...|+..++ +..+.|
T Consensus 27 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~--~~~~~f 95 (261)
T 3ege_A 27 INLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLA--LPDKSV 95 (261)
T ss_dssp HHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCC--SCTTCB
T ss_pred HHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCC--CCCCCE
Confidence 4455677899999999999999998886 3479999999998877655443 7899999998876 344789
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
|.|++... +..-+ ....+|..+.+.| + ||++++.++.
T Consensus 96 D~v~~~~~------l~~~~----------------~~~~~l~~~~~~L----k-gG~~~~~~~~ 132 (261)
T 3ege_A 96 DGVISILA------IHHFS----------------HLEKSFQEMQRII----R-DGTIVLLTFD 132 (261)
T ss_dssp SEEEEESC------GGGCS----------------SHHHHHHHHHHHB----C-SSCEEEEEEC
T ss_pred eEEEEcch------Hhhcc----------------CHHHHHHHHHHHh----C-CcEEEEEEcC
Confidence 99997432 11101 1134677787876 9 9999888876
No 220
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.73 E-value=1.6e-08 Score=104.45 Aligned_cols=123 Identities=13% Similarity=0.096 Sum_probs=87.0
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC---CC-----eEEEEecCCCCCcccc--CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG---VT-----NTIVCNYDGNELPKVL--GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g---~~-----nv~v~~~D~~~~~~~~--~~ 247 (496)
.+.+|||+|+|.|+.+..++... ...|+++|+|+..++.+++++..++ +. ++.++..|+..+.... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 46899999999999998877653 3789999999999999999986543 22 5899999998875432 23
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e 318 (496)
+.||+|++|+|-...| ..| ..+. -....+.++..+.+.| +|||.||.-+||.+..
T Consensus 266 ~~fDvII~D~~d~P~~---~~p--------~~L~-t~eFy~~~~~~~~~~L----~pgGilv~qs~s~~~~ 320 (364)
T 2qfm_A 266 REFDYVINDLTAVPIS---TSP--------EEDS-TWEFLRLILDLSMKVL----KQDGKYFTQGNCVNLT 320 (364)
T ss_dssp CCEEEEEEECCSSCCC---CC------------C-HHHHHHHHHHHHHHTE----EEEEEEEEEEEETTCH
T ss_pred CCceEEEECCCCcccC---cCc--------hhhh-HHHHHHHHHHHHHhhC----CCCcEEEEEcCCcchH
Confidence 6899999999741111 111 1111 1233444555566665 9999999999998873
No 221
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.72 E-value=1.4e-08 Score=102.80 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=83.2
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--CeEEEEecCCCCCccccCCCCcCE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
..+.+|||+|||+|+.+..++... +.+.|+++|+++..++.+++++..+ |+ .++.++..|+..+... ..+.||+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~-~~~~fD~ 184 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDV 184 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh-cCCCceE
Confidence 345799999999999999888753 3479999999999999999998765 43 4689999998764322 2368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|++|++.. .| |. .. ....+++..+.+.| +|||.|+..+.+..
T Consensus 185 Ii~d~~~~-~~-----~~-------~~-----l~t~~~l~~~~~~L----kpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 185 IITDSSDP-VG-----PA-------ES-----LFGQSYYELLRDAL----KEDGILSSQGESVW 226 (314)
T ss_dssp EEECCC-------------------------------HHHHHHHHE----EEEEEEEEECCCTT
T ss_pred EEEcCCCC-CC-----cc-------hh-----hhHHHHHHHHHhhc----CCCeEEEEECCCcc
Confidence 99998621 11 00 00 01245677777776 99999999876654
No 222
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.72 E-value=4.7e-08 Score=93.48 Aligned_cols=111 Identities=12% Similarity=0.084 Sum_probs=81.7
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc---CCCCcC
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLNTVD 251 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~---~~~~fD 251 (496)
.+.++.+|||+|||+|..+..++.... .|+++|+|+..++.+++++ ...++.++..|+..++... ....||
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCcc
Confidence 357889999999999999999998753 7999999999999998877 3447899999998764321 012499
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+|++....... ...+ ...+|..+.+.| +|||+|+.++.+.
T Consensus 127 ~v~~~~~~~~~-------------~~~~-------~~~~l~~~~~~L----kpgG~l~i~~~~~ 166 (245)
T 3ggd_A 127 NIYMRTGFHHI-------------PVEK-------RELLGQSLRILL----GKQGAMYLIELGT 166 (245)
T ss_dssp EEEEESSSTTS-------------CGGG-------HHHHHHHHHHHH----TTTCEEEEEEECT
T ss_pred EEEEcchhhcC-------------CHHH-------HHHHHHHHHHHc----CCCCEEEEEeCCc
Confidence 99986432111 1111 234677777776 9999988877653
No 223
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.71 E-value=4.5e-08 Score=97.06 Aligned_cols=113 Identities=16% Similarity=0.092 Sum_probs=83.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--CeEEEEecCCCCCccccCCCCcCEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+.+|||+|||.|+.+..++... +...|+++|+++..++.+++++..+ ++ .++.++.+|+..+.... .+.||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-ENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-CSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCeeEE
Confidence 46799999999999998887653 3469999999999999999998764 33 46999999997652211 3689999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
++|+|.. .+. +...+ ..+++..+.+.| +|||.||..+.+
T Consensus 153 i~d~~~~-~~~----~~~l~-------------~~~~~~~~~~~L----~pgG~lv~~~~~ 191 (275)
T 1iy9_A 153 MVDSTEP-VGP----AVNLF-------------TKGFYAGIAKAL----KEDGIFVAQTDN 191 (275)
T ss_dssp EESCSSC-CSC----CCCCS-------------TTHHHHHHHHHE----EEEEEEEEECCC
T ss_pred EECCCCC-CCc----chhhh-------------HHHHHHHHHHhc----CCCcEEEEEcCC
Confidence 9999852 221 11000 123566666776 999999998765
No 224
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.71 E-value=1.7e-08 Score=101.77 Aligned_cols=115 Identities=16% Similarity=0.183 Sum_probs=83.2
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--CeEEEEecCCCCCccccCCCCcCE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
..+.+|||+|||+|+.+..++... +...|+++|+++..++.+++++..+ ++ .++.++..|+..+... ..+.||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~-~~~~fD~ 171 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDAFDV 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-CSSCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh-CCCCceE
Confidence 456899999999999999888753 3479999999999999999998763 33 5689999998764221 2368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|++|+|... + |. . .....+++..+.++| +|||.||..+.+.
T Consensus 172 Ii~d~~~~~-~-----~~-------~-----~l~~~~~l~~~~~~L----kpgG~lv~~~~~~ 212 (304)
T 2o07_A 172 IITDSSDPM-G-----PA-------E-----SLFKESYYQLMKTAL----KEDGVLCCQGECQ 212 (304)
T ss_dssp EEEECC-----------------------------CHHHHHHHHHE----EEEEEEEEEEECT
T ss_pred EEECCCCCC-C-----cc-------h-----hhhHHHHHHHHHhcc----CCCeEEEEecCCc
Confidence 999987321 1 00 0 012345677777776 9999999887553
No 225
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.71 E-value=4e-09 Score=114.56 Aligned_cols=166 Identities=18% Similarity=0.127 Sum_probs=107.5
Q ss_pred cccEEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCC--------------CcEEEEEeCCHHHHHHHHHH
Q 010971 157 AGFYMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN--------------TGLIYANEMKASRLKSLTAN 222 (496)
Q Consensus 157 ~G~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~--------------~g~V~A~D~s~~rl~~l~~n 222 (496)
.|.|+--..-+.+.+.++.++++ +|||.|||+|+..+.++..+.. ...|+|+|+++..+..++.|
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 35444333445666777888877 9999999999998887665421 35799999999999999999
Q ss_pred HHHcCCCe-EEEEecCCCCCccccCCCCcCEEEECCCCCCCCcc----cCCchhhcc--------CCHHHHHHHHHHHHH
Q 010971 223 LHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVI----SKDESVKTS--------KSLEDIQKCSYLQKQ 289 (496)
Q Consensus 223 l~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i----~r~p~~k~~--------~s~~~i~~l~~lQ~~ 289 (496)
+...|+.. +.+.++|....+.. ....||+||.+||.+..... ..++...+. ..+. ...+..
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~~-~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~-----~~~~~~ 376 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQH-PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPT-----GNANFA 376 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCSC-TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCT-----TCTHHH
T ss_pred HHHhCCCcccceeccchhcCccc-ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCC-----cchhHH
Confidence 99999863 44467787654432 23689999999999864321 112211111 1011 111234
Q ss_pred HHHHHHHhhhhcCCCCcEEEEEeCC-CCCcC--CHHHH-HHHHHhCCc
Q 010971 290 LILAAIDMVDANSKSGGYIVYSTCS-IMVTE--NEAVI-DYALKKRDV 333 (496)
Q Consensus 290 LL~~A~~~l~~~lkpGG~LVYSTCS-i~~eE--NE~vV-~~~L~~~~~ 333 (496)
.|.+++..| +|||++++.+-. ++... .+.-+ ++++++..+
T Consensus 377 Fl~~~l~~L----k~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l 420 (544)
T 3khk_A 377 WMLHMLYHL----APTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLV 420 (544)
T ss_dssp HHHHHHHTE----EEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCE
T ss_pred HHHHHHHHh----ccCceEEEEecchhhhcCcchHHHHHHHHHhCCcH
Confidence 688888887 999998877633 22222 34444 455665544
No 226
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.71 E-value=4e-07 Score=93.23 Aligned_cols=115 Identities=9% Similarity=0.034 Sum_probs=87.1
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCcCEEEE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..+.+|||+|||+|..+..+++..++ ..++++|+ +..++.+++++...|+. ++.++.+|+......++ +.||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKE-VEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTT-CEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 46789999999999999999998754 68999999 99999999999998884 69999999876420122 68999987
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e 318 (496)
-- + ...|+..+ ...+|.++.+.| +|||+|+.....+...
T Consensus 255 ~~------v-------lh~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~~~ 293 (363)
T 3dp7_A 255 SQ------F-------LDCFSEEE-------VISILTRVAQSI----GKDSKVYIMETLWDRQ 293 (363)
T ss_dssp ES------C-------STTSCHHH-------HHHHHHHHHHHC----CTTCEEEEEECCTTSC
T ss_pred ec------h-------hhhCCHHH-------HHHHHHHHHHhc----CCCcEEEEEeeccCCc
Confidence 21 1 11233332 245688888876 9999999988766443
No 227
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.70 E-value=4.6e-08 Score=109.82 Aligned_cols=117 Identities=14% Similarity=0.109 Sum_probs=87.6
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH------cCCCeEEEEecCCCCCcccc
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHR------MGVTNTIVCNYDGNELPKVL 245 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r------~g~~nv~v~~~D~~~~~~~~ 245 (496)
..+...++.+|||+|||+|..+..|+...++...|+|+|+++..++.++++++. .|+.++.+..+|+..++..
T Consensus 715 elL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~- 793 (950)
T 3htx_A 715 KHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR- 793 (950)
T ss_dssp HHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT-
T ss_pred HHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc-
Confidence 344556899999999999999998887754446999999999999999998774 3677899999999988743
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.+.||+|++. +++..-+ .. ....++..+.+.| +|| .|+.+|+..
T Consensus 794 -d~sFDlVV~~------eVLeHL~-------dp-------~l~~~L~eI~RvL----KPG-~LIISTPN~ 837 (950)
T 3htx_A 794 -LHDVDIGTCL------EVIEHME-------ED-------QACEFGEKVLSLF----HPK-LLIVSTPNY 837 (950)
T ss_dssp -SCSCCEEEEE------SCGGGSC-------HH-------HHHHHHHHHHHTT----CCS-EEEEEECBG
T ss_pred -cCCeeEEEEe------CchhhCC-------hH-------HHHHHHHHHHHHc----CCC-EEEEEecCc
Confidence 4789999982 2222111 11 1234567777776 998 888888653
No 228
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.70 E-value=4.7e-07 Score=91.16 Aligned_cols=113 Identities=12% Similarity=0.065 Sum_probs=86.4
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
+..++.+|||+|||+|..+..+++..++ ..++++|+ +..+..+++++...|+ .++.+..+|+.. + .+ ..||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~--~p-~~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHED-LSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-P--LP-AGAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C--CC-CSCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCC-CeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-C--CC-CCCcEE
Confidence 4456789999999999999999998754 68999999 9999999999999998 469999999862 2 22 379999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
++-- + ...|...+ ..++|.++.+.| +|||+|+.....+..
T Consensus 240 ~~~~------v-------lh~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 240 VLSA------V-------LHDWDDLS-------AVAILRRCAEAA----GSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEES------C-------GGGSCHHH-------HHHHHHHHHHHH----TTTCEEEEEECCCC-
T ss_pred EEeh------h-------hccCCHHH-------HHHHHHHHHHhc----CCCCEEEEEeecCCC
Confidence 9721 1 11233222 356788888887 999999988765543
No 229
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.69 E-value=1.6e-08 Score=102.56 Aligned_cols=115 Identities=17% Similarity=0.248 Sum_probs=84.4
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--CC--CeEEEEecCCCCCccccCCCCcCE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--GV--TNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g~--~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
..+.+|||+|||+|+.+..++... +...|+++|+|+..++.+++++..+ ++ .++.++..|+..+.... .+.||+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fDv 192 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDV 192 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-CCCceE
Confidence 356899999999999999888653 3479999999999999999998763 23 56999999987643211 368999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
|++|++.. .| |.. .+ .+.+++..+.+.| +|||.|+..+.+.
T Consensus 193 Ii~d~~~p-~~-----~~~-------~l-----~~~~~l~~~~~~L----kpgG~lv~~~~~~ 233 (321)
T 2pt6_A 193 IIVDSSDP-IG-----PAE-------TL-----FNQNFYEKIYNAL----KPNGYCVAQCESL 233 (321)
T ss_dssp EEEECCCS-SS-----GGG-------GG-----SSHHHHHHHHHHE----EEEEEEEEEECCT
T ss_pred EEECCcCC-CC-----cch-------hh-----hHHHHHHHHHHhc----CCCcEEEEEcCCc
Confidence 99998631 11 110 00 1245677777776 9999999977654
No 230
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.69 E-value=2.6e-07 Score=93.79 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=87.3
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~ 249 (496)
...++..++.+|||+|||+|..+..++...+ ...++++|+ +..++.+++++...|+. ++.++..|+... ++ ..
T Consensus 176 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~-~~ 249 (360)
T 1tw3_A 176 AAAYDWTNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP---LP-RK 249 (360)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---CS-SC
T ss_pred HHhCCCccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---CC-CC
Confidence 3445667889999999999999999998875 368999999 99999999999999986 699999998652 22 35
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
||+|++... + ..+...+ ...+|.++.+.| +|||+|+.++..
T Consensus 250 ~D~v~~~~v------l-------~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~ 290 (360)
T 1tw3_A 250 ADAIILSFV------L-------LNWPDHD-------AVRILTRCAEAL----EPGGRILIHERD 290 (360)
T ss_dssp EEEEEEESC------G-------GGSCHHH-------HHHHHHHHHHTE----EEEEEEEEEECC
T ss_pred ccEEEEccc------c-------cCCCHHH-------HHHHHHHHHHhc----CCCcEEEEEEEe
Confidence 999987322 1 1122221 145778888876 999999988766
No 231
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.69 E-value=4.1e-08 Score=95.26 Aligned_cols=102 Identities=12% Similarity=0.125 Sum_probs=76.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDa 257 (496)
++.+|||+|||+|..+..++.. ...|+++|+|+..++.++++.. .+ +...|+..++ +..+.||.|++..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~--~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLP--FPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCC--SCTTCEEEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCC--CCCCCEEEEEEcc
Confidence 7889999999999999988875 3589999999999999887754 23 6778888776 3347899999743
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 258 PCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.. ..+......+|..+.++| +|||+|+.++.+.
T Consensus 123 ~~---------------------~~~~~~~~~~l~~~~~~L----kpgG~l~~~~~~~ 155 (260)
T 2avn_A 123 DV---------------------LSYVENKDKAFSEIRRVL----VPDGLLIATVDNF 155 (260)
T ss_dssp SH---------------------HHHCSCHHHHHHHHHHHE----EEEEEEEEEEEBH
T ss_pred hh---------------------hhccccHHHHHHHHHHHc----CCCeEEEEEeCCh
Confidence 20 011011345677777776 9999999988764
No 232
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.68 E-value=2.9e-07 Score=93.74 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=88.9
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNT 249 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~ 249 (496)
+..++..++.+|||+|||+|..+..++...+ ...++++|+ +..++.+++++...|+.+ +.++.+|+...+ + ..
T Consensus 183 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~--~~ 256 (359)
T 1x19_A 183 LEEAKLDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES--Y--PE 256 (359)
T ss_dssp HHHCCCTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC--C--CC
T ss_pred HHhcCCCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC--C--CC
Confidence 3445667889999999999999999999875 368999999 999999999999999876 999999998764 2 34
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
+|+|++.-. + ..+..+ ...++|.++.+.| +|||+|+..+....
T Consensus 257 ~D~v~~~~v------l-------h~~~d~-------~~~~~l~~~~~~L----~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 ADAVLFCRI------L-------YSANEQ-------LSTIMCKKAFDAM----RSGGRLLILDMVID 299 (359)
T ss_dssp CSEEEEESC------G-------GGSCHH-------HHHHHHHHHHTTC----CTTCEEEEEEECCC
T ss_pred CCEEEEech------h-------ccCCHH-------HHHHHHHHHHHhc----CCCCEEEEEecccC
Confidence 599998321 1 122222 1345677777776 99999988776543
No 233
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.68 E-value=4e-08 Score=99.81 Aligned_cols=113 Identities=11% Similarity=0.037 Sum_probs=85.1
Q ss_pred CeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECCCC
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPC 259 (496)
.+|||+|||.|+.+..++...++ ..|+++|+++..++.+++++....-.++.++..|+..+......+.||+|++|++.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~-~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQ-SRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTT-CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCC-cEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 49999999999999999987654 58999999999999999988655456799999999876433334689999999763
Q ss_pred CCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 260 SGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 260 Sg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.. +. |...+ ..+++..+.+.| +|||.||..+.+-
T Consensus 170 ~~-~~----~~~L~-------------t~efl~~~~r~L----kpgGvlv~~~~~~ 203 (317)
T 3gjy_A 170 GA-IT----PQNFT-------------TVEFFEHCHRGL----APGGLYVANCGDH 203 (317)
T ss_dssp TS-CC----CGGGS-------------BHHHHHHHHHHE----EEEEEEEEEEEEC
T ss_pred cc-cc----chhhh-------------HHHHHHHHHHhc----CCCcEEEEEecCC
Confidence 31 11 11111 134567777776 9999999887654
No 234
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.67 E-value=1.1e-07 Score=90.00 Aligned_cols=106 Identities=14% Similarity=0.147 Sum_probs=79.1
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++... ..|+++|+++..++.+++++ .++.+...|+..++. .+.||+|++-
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~---~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL---GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC---SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc---CCCCcEEEEc
Confidence 578899999999999999999875 38999999999999988764 457888999987763 3789999951
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
. +++.. ..+..+ ...+|..+.++| +|||+|+.+++..
T Consensus 108 ----~-~~~~~------~~~~~~-------~~~~l~~~~~~L----~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 108 ----F-SSVGY------LKTTEE-------LGAAVASFAEHL----EPGGVVVVEPWWF 144 (239)
T ss_dssp ----T-TGGGG------CCSHHH-------HHHHHHHHHHTE----EEEEEEEECCCCC
T ss_pred ----C-chHhh------cCCHHH-------HHHHHHHHHHhc----CCCeEEEEEeccC
Confidence 1 11111 111122 245677777776 9999999987665
No 235
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.67 E-value=5.3e-08 Score=90.85 Aligned_cols=100 Identities=18% Similarity=0.167 Sum_probs=75.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDa 257 (496)
++.+|||+|||+|..+..+ +...|+++|+++..++.+++++ .++.++..|+..++ +..+.||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~--~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALP--FPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCC--SCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCC--CCCCcEEEEEEcC
Confidence 7899999999999988765 2238999999999999988876 56778889988776 3347899999753
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 258 PCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
. +..-+ . ...+|..+.++| +|||+|+.++...
T Consensus 104 ~------l~~~~------~----------~~~~l~~~~~~L----~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 104 T------LEFVE------D----------VERVLLEARRVL----RPGGALVVGVLEA 135 (211)
T ss_dssp C------TTTCS------C----------HHHHHHHHHHHE----EEEEEEEEEEECT
T ss_pred h------hhhcC------C----------HHHHHHHHHHHc----CCCCEEEEEecCC
Confidence 2 11111 1 134677777776 9999999987543
No 236
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.66 E-value=5e-08 Score=98.14 Aligned_cols=93 Identities=13% Similarity=0.069 Sum_probs=76.0
Q ss_pred EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Q 010971 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|..+..-....+..+.+.++++|||+|||+|..|..|+.. .+.|+|+|+|+..+..+++++. +..++.++++|+.
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l 106 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDAL 106 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchh
Confidence 5444333344566778889999999999999999999987 3689999999999999999988 4568999999998
Q ss_pred CCccccCCCCcCEEEECCCC
Q 010971 240 ELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 240 ~~~~~~~~~~fD~VLlDaPC 259 (496)
.++.. ...||+|+.+.|+
T Consensus 107 ~~~~~--~~~fD~Iv~NlPy 124 (295)
T 3gru_A 107 KVDLN--KLDFNKVVANLPY 124 (295)
T ss_dssp TSCGG--GSCCSEEEEECCG
T ss_pred hCCcc--cCCccEEEEeCcc
Confidence 87532 2579999999994
No 237
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.66 E-value=2.9e-08 Score=98.02 Aligned_cols=90 Identities=14% Similarity=0.033 Sum_probs=72.0
Q ss_pred chhHHHhcCCCCC--CeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcC--------C-CeEEEEe
Q 010971 167 SFLPVMALAPQEK--ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMG--------V-TNTIVCN 235 (496)
Q Consensus 167 S~l~v~~L~~~~g--~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g--------~-~nv~v~~ 235 (496)
......++.+.+| .+|||++||.|..|+.+|.. .+.|+++|+++..+..+++++++.+ + .++.+++
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 3455667777778 99999999999999999987 2589999999999888888887652 4 4699999
Q ss_pred cCCCCCccccCCCCcCEEEECCCCC
Q 010971 236 YDGNELPKVLGLNTVDRVLLDAPCS 260 (496)
Q Consensus 236 ~D~~~~~~~~~~~~fD~VLlDaPCS 260 (496)
+|+..+...+. ..||+|++|||..
T Consensus 152 ~D~~~~L~~~~-~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 152 ASSLTALTDIT-PRPQVVYLDPMFP 175 (258)
T ss_dssp SCHHHHSTTCS-SCCSEEEECCCCC
T ss_pred CCHHHHHHhCc-ccCCEEEEcCCCC
Confidence 99876533232 4699999999964
No 238
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.65 E-value=4.9e-10 Score=108.76 Aligned_cols=96 Identities=13% Similarity=0.118 Sum_probs=77.3
Q ss_pred EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Q 010971 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|..+.......+..+.+.++++|||+|||+|..|.+++... +.|+|+|+++..++.+++++. +..++.++++|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 55565555666777888899999999999999999999873 789999999999988888775 4568999999998
Q ss_pred CCccccCCCCcCEEEECCCCCCC
Q 010971 240 ELPKVLGLNTVDRVLLDAPCSGT 262 (496)
Q Consensus 240 ~~~~~~~~~~fD~VLlDaPCSg~ 262 (496)
.++.. ..+.| .|++++|+..+
T Consensus 86 ~~~~~-~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 86 QFQFP-NKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp TTTCC-CSSEE-EEEEECCSSSC
T ss_pred hcCcc-cCCCc-EEEEeCCcccc
Confidence 87521 12468 89999997654
No 239
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.65 E-value=8.8e-07 Score=90.91 Aligned_cols=117 Identities=12% Similarity=0.022 Sum_probs=89.1
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCc
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~f 250 (496)
..++..++.+|||+|||+|..+..++...++ ..++++|+ +..++.+++++...|+. ++.+...|+.. + .+ ..|
T Consensus 196 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~--~p-~~~ 269 (369)
T 3gwz_A 196 AAYDFSGAATAVDIGGGRGSLMAAVLDAFPG-LRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-T--IP-DGA 269 (369)
T ss_dssp HHSCCTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-C--CC-SSC
T ss_pred HhCCCccCcEEEEeCCCccHHHHHHHHHCCC-CeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-C--CC-CCc
Confidence 3345677899999999999999999998654 68999999 99999999999999974 59999999872 2 22 379
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e 318 (496)
|+|++-- + ...++... ..++|.++.+.| +|||+|+..+..+...
T Consensus 270 D~v~~~~------v-------lh~~~d~~-------~~~~L~~~~~~L----~pgG~l~i~e~~~~~~ 313 (369)
T 3gwz_A 270 DVYLIKH------V-------LHDWDDDD-------VVRILRRIATAM----KPDSRLLVIDNLIDER 313 (369)
T ss_dssp SEEEEES------C-------GGGSCHHH-------HHHHHHHHHTTC----CTTCEEEEEEEBCCSS
T ss_pred eEEEhhh------h-------hccCCHHH-------HHHHHHHHHHHc----CCCCEEEEEEeccCCC
Confidence 9998721 1 11233222 245788888876 9999999988766543
No 240
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.64 E-value=3.6e-08 Score=95.78 Aligned_cols=98 Identities=15% Similarity=0.233 Sum_probs=76.0
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++..++ .+.|+++|+++.+++.++++. .++.+...|+..++ +..+.||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~--~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLP--FSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCS--BCTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCC--CCCCceeEEEEe
Confidence 5789999999999999999998764 368999999999999887764 45678888988776 334789999963
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.. + ..+..+.++| +|||+|+.++...
T Consensus 156 ~~----------~-------------------~~l~~~~~~L----~pgG~l~~~~~~~ 181 (269)
T 1p91_A 156 YA----------P-------------------CKAEELARVV----KPGGWVITATPGP 181 (269)
T ss_dssp SC----------C-------------------CCHHHHHHHE----EEEEEEEEEEECT
T ss_pred CC----------h-------------------hhHHHHHHhc----CCCcEEEEEEcCH
Confidence 11 0 0255666665 9999999987543
No 241
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.64 E-value=4.4e-07 Score=91.84 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=89.4
Q ss_pred cCCCC-CCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcC
Q 010971 174 LAPQE-KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 174 L~~~~-g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD 251 (496)
++..+ +.+|||+|||+|..+..++...++ ..++++|+ +..+..+++++...++.+ +.+..+|+...+... ...||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE-GGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-TCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-CCCcc
Confidence 34455 889999999999999999998764 78999999 889999999999999864 999999988764212 35799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
+|++-- ++ ..++..+ ...+|.++.+.| +|||+|+.....+..
T Consensus 251 ~v~~~~------vl-------h~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 251 VVMLND------CL-------HYFDARE-------AREVIGHAAGLV----KPGGALLILTMTMND 292 (352)
T ss_dssp EEEEES------CG-------GGSCHHH-------HHHHHHHHHHTE----EEEEEEEEEEECCCT
T ss_pred EEEEec------cc-------ccCCHHH-------HHHHHHHHHHHc----CCCCEEEEEEeccCC
Confidence 999721 11 1233322 255788888876 999999988776544
No 242
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.64 E-value=1.7e-07 Score=92.28 Aligned_cols=138 Identities=15% Similarity=0.112 Sum_probs=84.7
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-----------------CC-----------
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-----------------GV----------- 228 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~-----------------g~----------- 228 (496)
.++.+|||+|||+|. +..++.... ...|+++|+|+..++.+++++... |.
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcCh-HHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 378899999999999 443333322 358999999999999988866431 10
Q ss_pred --CeEEEEecCCCC-Ccc---ccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 010971 229 --TNTIVCNYDGNE-LPK---VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANS 302 (496)
Q Consensus 229 --~nv~v~~~D~~~-~~~---~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~l 302 (496)
..+.++..|+.. +|. .++.+.||+|++-. + ...+..-......+|..+.++|
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~------~------------l~~~~~~~~~~~~~l~~~~r~L---- 205 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAF------C------------LEAVSPDLASFQRALDHITTLL---- 205 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEES------C------------HHHHCSSHHHHHHHHHHHHTTE----
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehh------h------------hhhhcCCHHHHHHHHHHHHHhc----
Confidence 014567778876 331 12335699999731 1 1110000112345677777775
Q ss_pred CCCcEEEEEeCCC------------CCcCCHHHHHHHHHhCCcEEeec
Q 010971 303 KSGGYIVYSTCSI------------MVTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 303 kpGG~LVYSTCSi------------~~eENE~vV~~~L~~~~~~lv~~ 338 (496)
||||+|+.+.+.- ..--+.+.+..+|...+|+++.+
T Consensus 206 kpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 206 RPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp EEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 9999999874211 00124556666777777776654
No 243
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.63 E-value=4.4e-08 Score=96.35 Aligned_cols=103 Identities=10% Similarity=0.114 Sum_probs=75.9
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDa 257 (496)
.+.+|||+|||+|..+..|+... ..|+|+|+|+.+++.+++ ..++.+.++|+..++ ++.++||.|++--
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~--~~~~sfD~v~~~~ 107 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTG--LPPASVDVAIAAQ 107 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCC--CCSSCEEEEEECS
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhc--ccCCcccEEEEee
Confidence 46799999999999999888753 589999999998876542 357899999998876 4458999999721
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 010971 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 258 PCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e 318 (496)
++ .|. .. .+.+.++.++| ||||+|++.+.+....
T Consensus 108 ------~~------h~~-~~----------~~~~~e~~rvL----kpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 108 ------AM------HWF-DL----------DRFWAELRRVA----RPGAVFAAVTYGLTRV 141 (257)
T ss_dssp ------CC------TTC-CH----------HHHHHHHHHHE----EEEEEEEEEEECCCBC
T ss_pred ------eh------hHh-hH----------HHHHHHHHHHc----CCCCEEEEEECCCCCC
Confidence 11 011 11 12466677765 9999999988876543
No 244
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.62 E-value=1.7e-07 Score=87.65 Aligned_cols=102 Identities=17% Similarity=0.108 Sum_probs=73.8
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++.. + ..++++|+++..++.++.++. .+...|+..+...+..+.||.|++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKLD-------HVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTSS-------EEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhCC-------cEEEcchhhcCCCCCCCccCEEEEC
Confidence 67899999999999999988876 3 799999999999888876542 4667887764322444789999974
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
. ++..-+ .+ ..+|..+.++| +|||+|+.++-.
T Consensus 101 ~------~l~~~~------~~----------~~~l~~~~~~L----~~gG~l~~~~~~ 132 (230)
T 3cc8_A 101 D------VLEHLF------DP----------WAVIEKVKPYI----KQNGVILASIPN 132 (230)
T ss_dssp S------CGGGSS------CH----------HHHHHHTGGGE----EEEEEEEEEEEC
T ss_pred C------hhhhcC------CH----------HHHHHHHHHHc----CCCCEEEEEeCC
Confidence 2 221111 11 24566666665 999999998743
No 245
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.62 E-value=8e-08 Score=95.06 Aligned_cols=113 Identities=10% Similarity=0.084 Sum_probs=74.4
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcC---CCcEE--EEEeCCHHHHHHHHHHHHHc-CCCeEEEE--ecCCCCCcc----
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMK---NTGLI--YANEMKASRLKSLTANLHRM-GVTNTIVC--NYDGNELPK---- 243 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~---~~g~V--~A~D~s~~rl~~l~~nl~r~-g~~nv~v~--~~D~~~~~~---- 243 (496)
+.++.+|||+|||+|..|..++..+. +...| +++|+|+.+++.+++++... ++.++.+. ..|+..++.
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 45788999999999998875544331 23444 99999999999999998764 66766554 444433321
Q ss_pred ccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 244 VLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 244 ~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+..+.||+|++-. ++. +-.. ....|..+.++| ||||+|+.++.+
T Consensus 130 ~~~~~~fD~V~~~~------~l~------~~~d----------~~~~l~~~~r~L----kpgG~l~i~~~~ 174 (292)
T 2aot_A 130 KKELQKWDFIHMIQ------MLY------YVKD----------IPATLKFFHSLL----GTNAKMLIIVVS 174 (292)
T ss_dssp TTCCCCEEEEEEES------CGG------GCSC----------HHHHHHHHHHTE----EEEEEEEEEEEC
T ss_pred ccCCCceeEEEEee------eee------ecCC----------HHHHHHHHHHHc----CCCcEEEEEEec
Confidence 02347899998721 111 1111 123567777765 999999988654
No 246
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.62 E-value=3.9e-08 Score=99.32 Aligned_cols=118 Identities=12% Similarity=0.110 Sum_probs=84.5
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--C---CCeEEEEecCCCCCccccCCCCcC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G---VTNTIVCNYDGNELPKVLGLNTVD 251 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g---~~nv~v~~~D~~~~~~~~~~~~fD 251 (496)
..+.+|||+|||+|+.+..++... +...|+++|+++..++.+++++..+ | -.++.++..|+..+... ..+.||
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~-~~~~fD 153 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-TEERYD 153 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH-CCCCEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh-cCCCcc
Confidence 345799999999999999888754 3468999999999999999998762 2 35799999999775221 236899
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+|++|++... + . ..|.... ...+++..+.+.| +|||.|+..+.+.
T Consensus 154 ~Ii~d~~~~~-~-~-~~~~~~l------------~~~~~l~~~~~~L----kpgG~lv~~~~~~ 198 (314)
T 1uir_A 154 VVIIDLTDPV-G-E-DNPARLL------------YTVEFYRLVKAHL----NPGGVMGMQTGMI 198 (314)
T ss_dssp EEEEECCCCB-S-T-TCGGGGG------------SSHHHHHHHHHTE----EEEEEEEEEEEEE
T ss_pred EEEECCCCcc-c-c-cCcchhc------------cHHHHHHHHHHhc----CCCcEEEEEccCc
Confidence 9999987421 0 0 0110000 0245677777776 9999999876553
No 247
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.59 E-value=1.4e-07 Score=89.10 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=83.7
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaP 258 (496)
+.+|||+|||+|..+..++.. +++|+++..++.++.+ ++.+...|+..++ +..+.||+|++...
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~--~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTAENLP--LKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBTTBCC--SCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEcccccCC--CCCCCeeEEEEcch
Confidence 889999999999998766532 9999999999988877 5677888887765 33468999997432
Q ss_pred CCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc--------------------
Q 010971 259 CSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT-------------------- 318 (496)
Q Consensus 259 CSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e-------------------- 318 (496)
+..-+ . ...+|..+.++| +|||+|+.++......
T Consensus 112 ------l~~~~------~----------~~~~l~~~~~~L----~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 1vlm_A 112 ------ICFVD------D----------PERALKEAYRIL----KKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARF 165 (219)
T ss_dssp ------GGGSS------C----------HHHHHHHHHHHE----EEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCC
T ss_pred ------Hhhcc------C----------HHHHHHHHHHHc----CCCcEEEEEEeCCccHHHHHHHHHhcCcchhccccc
Confidence 11111 1 134677777776 9999999987543211
Q ss_pred CCHHHHHHHHHhCCcEEeec
Q 010971 319 ENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 319 ENE~vV~~~L~~~~~~lv~~ 338 (496)
=+...+..+|++.+++++.+
T Consensus 166 ~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 166 FSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEE
Confidence 14556666777777777665
No 248
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.59 E-value=6.7e-08 Score=100.36 Aligned_cols=117 Identities=17% Similarity=0.244 Sum_probs=82.7
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEEE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
.+|.+|||+|||+|..++.+|+. +...|+|+|.++ .+..++++++.+|+.+ |.++++|...+. + +..||+|++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--l-pe~~Dvivs 155 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--L-PEQVDAIVS 155 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--C-SSCEEEEEC
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--C-CccccEEEe
Confidence 36899999999999988766654 346899999996 7889999999999976 999999998874 2 268999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC--CcCCHH
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM--VTENEA 322 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~--~eENE~ 322 (496)
+.- |.+++.. ..+ ..+|...-++ |+|||.++-+.|+++ +-|.+.
T Consensus 156 E~~--~~~l~~e----------~~l-------~~~l~a~~r~----Lkp~G~~iP~~atly~apie~~~ 201 (376)
T 4hc4_A 156 EWM--GYGLLHE----------SML-------SSVLHARTKW----LKEGGLLLPASAELFIVPISDQM 201 (376)
T ss_dssp CCC--BTTBTTT----------CSH-------HHHHHHHHHH----EEEEEEEESCEEEEEEEEECCHH
T ss_pred ecc--ccccccc----------chh-------hhHHHHHHhh----CCCCceECCccceEEEEEeccch
Confidence 632 3322211 111 1123333344 599999998777754 345543
No 249
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.58 E-value=2.4e-07 Score=86.70 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=79.7
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEE
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
...++.+|||+|||+|..+..++ ..|+++|+++. ++.+...|+..++ +..+.||+|+
T Consensus 64 ~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~~~~~~~d~~~~~--~~~~~fD~v~ 120 (215)
T 2zfu_A 64 QRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------DPRVTVCDMAQVP--LEDESVDVAV 120 (215)
T ss_dssp TSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------STTEEESCTTSCS--CCTTCEEEEE
T ss_pred ccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------CceEEEeccccCC--CCCCCEeEEE
Confidence 34578899999999999887652 57999999987 4556778887765 3347899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcE
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVK 334 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~ 334 (496)
+... +. +++ ...+|..+.++| +|||+|+.+++... ..+...+..+++..+++
T Consensus 121 ~~~~------l~-~~~----------------~~~~l~~~~~~L----~~gG~l~i~~~~~~-~~~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 121 FCLS------LM-GTN----------------IRDFLEEANRVL----KPGGLLKVAEVSSR-FEDVRTFLRAVTKLGFK 172 (215)
T ss_dssp EESC------CC-SSC----------------HHHHHHHHHHHE----EEEEEEEEEECGGG-CSCHHHHHHHHHHTTEE
T ss_pred Eehh------cc-ccC----------------HHHHHHHHHHhC----CCCeEEEEEEcCCC-CCCHHHHHHHHHHCCCE
Confidence 7432 11 111 134577777776 99999999887642 23666777778787777
Q ss_pred Eee
Q 010971 335 LVP 337 (496)
Q Consensus 335 lv~ 337 (496)
++.
T Consensus 173 ~~~ 175 (215)
T 2zfu_A 173 IVS 175 (215)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 250
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.57 E-value=6.6e-07 Score=89.90 Aligned_cols=112 Identities=14% Similarity=0.057 Sum_probs=85.8
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCcCE
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
++..+ .+|||+|||+|..+..++...++ ..++++|+ +..++.+++++...|+. ++.++.+|+.. + ++ ..||+
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~--~~-~~~D~ 236 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPS-ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E--VP-SNGDI 236 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C--CC-SSCSE
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCC-CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C--CC-CCCCE
Confidence 34555 89999999999999999988754 68999999 99999999999888864 59999999866 2 22 57999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|++.-. ...|...+ ...+|.++.+.| +|||+|+.....+.
T Consensus 237 v~~~~v-------------l~~~~~~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 237 YLLSRI-------------IGDLDEAA-------SLRLLGNCREAM----AGDGRVVVIERTIS 276 (334)
T ss_dssp EEEESC-------------GGGCCHHH-------HHHHHHHHHHHS----CTTCEEEEEECCBC
T ss_pred EEEchh-------------ccCCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEeccC
Confidence 997321 11233322 246788888876 99999998876654
No 251
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.56 E-value=1.5e-07 Score=101.79 Aligned_cols=168 Identities=17% Similarity=0.181 Sum_probs=108.8
Q ss_pred ccc-EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCC------------CcEEEEEeCCHHHHHHHHHHH
Q 010971 157 AGF-YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN------------TGLIYANEMKASRLKSLTANL 223 (496)
Q Consensus 157 ~G~-~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~------------~g~V~A~D~s~~rl~~l~~nl 223 (496)
.|. |+.+ .-+.+.+.++.|++|++|+|-|||+||..+.+...+.. ...++++|+++.....++-|+
T Consensus 196 ~GqfyTP~-~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 196 SGEFYTPR-PVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp CCCCCCCH-HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred CceECCcH-HHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 353 4444 33556788899999999999999999998877765532 246999999999999999999
Q ss_pred HHcCCCeEEEEecCCCCCccc--cCCCCcCEEEECCCCCCCCc---ccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhh
Q 010971 224 HRMGVTNTIVCNYDGNELPKV--LGLNTVDRVLLDAPCSGTGV---ISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMV 298 (496)
Q Consensus 224 ~r~g~~nv~v~~~D~~~~~~~--~~~~~fD~VLlDaPCSg~G~---i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l 298 (496)
--.|+....+...|....+.. .....||+||.+||.++..- ..+.+.. ...+ ..+.-.+.+++..|
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~-~~~~--------~~~~~Fl~~~l~~L 345 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPED-MQTA--------ETAMLFLQLIMRKL 345 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGG-GCCC--------BHHHHHHHHHHHHB
T ss_pred HhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchh-cccc--------hhHHHHHHHHHHHh
Confidence 888887666777887654321 12257999999999976421 1111111 0111 22334566677665
Q ss_pred h---hcCCCCcEEEEEeCC--CCCcCCHH-HHHHHHHhCCcE
Q 010971 299 D---ANSKSGGYIVYSTCS--IMVTENEA-VIDYALKKRDVK 334 (496)
Q Consensus 299 ~---~~lkpGG~LVYSTCS--i~~eENE~-vV~~~L~~~~~~ 334 (496)
. ..+++||++++.+-. ++..-.+. +-++++++..+.
T Consensus 346 k~~~~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle~~~l~ 387 (530)
T 3ufb_A 346 KRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLH 387 (530)
T ss_dssp CCTTSSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHHHSEEE
T ss_pred hhhhhccCCCceEEEEecchhhhccchHHHHHHHHhhcCEEE
Confidence 1 112479998876542 33322233 455777776543
No 252
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.56 E-value=1.8e-07 Score=104.81 Aligned_cols=148 Identities=17% Similarity=0.180 Sum_probs=93.2
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCC--CcEEEEEeCCHHHHHHH--HHHHHH----cCCCeEEEEecCCCCCccccCCC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSL--TANLHR----MGVTNTIVCNYDGNELPKVLGLN 248 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~--~g~V~A~D~s~~rl~~l--~~nl~r----~g~~nv~v~~~D~~~~~~~~~~~ 248 (496)
.++.+|||.|||+|+..+.++..++. ...|+|+|+++..+..+ +.|+.. .|+.+..+...|...... ....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~-~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP-EDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG-GGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc-cccC
Confidence 46899999999999999998887642 35799999999999888 666554 345444555556554321 1236
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHH-----------HHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC-CC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK-----------CSYLQKQLILAAIDMVDANSKSGGYIVYSTCS-IM 316 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~-----------l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS-i~ 316 (496)
.||+|+++||.++..... ...... ...+.. ...+...++.+++.+| ++||++++.+-. ++
T Consensus 399 kFDVVIgNPPYg~~~~~~---~e~kd~-~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lL----KpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDP---AIKRKF-AHKIIQLTGNRPQTLFGQIGVEALFLELVTELV----QDGTVISAIMPKQYL 470 (878)
T ss_dssp TEEEEEECCBCCSSCCCH---HHHHHH-HHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHS----CTTCEEEEEEETHHH
T ss_pred CCCEEEECCCccccccch---hhhhhH-HHHhhhhccccccccccccchHHHHHHHHHHhc----CCCcEEEEEEChHHh
Confidence 899999999997543211 100000 000000 0124566788999986 999999887644 43
Q ss_pred CcC---CHHHHHHHHHhCCc
Q 010971 317 VTE---NEAVIDYALKKRDV 333 (496)
Q Consensus 317 ~eE---NE~vV~~~L~~~~~ 333 (496)
... ...+-++++++..+
T Consensus 471 f~sg~~~kkLRk~LLe~~~I 490 (878)
T 3s1s_A 471 TAQGNESKAFREFLVGNFGL 490 (878)
T ss_dssp HCCSHHHHHHHHHHTTTTCE
T ss_pred ccCChHHHHHHHHHHhCCCe
Confidence 222 23444555555543
No 253
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.50 E-value=1.2e-07 Score=93.52 Aligned_cols=100 Identities=11% Similarity=-0.032 Sum_probs=77.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc----CCCeEEEEecCCCCCccccCCCCcCEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM----GVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~----g~~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+.+|||+|||.|+.+..++.. + +.|+++|+++..++.+++++..+ .-.++.++.+|+..+. +.||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hhCCEE
Confidence 4579999999999999888776 4 79999999999999998876442 2346889999998764 579999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
++|++ +|.. .+..+.+.| +|||.||..+++..
T Consensus 144 i~d~~---------dp~~------------------~~~~~~~~L----~pgG~lv~~~~~~~ 175 (262)
T 2cmg_A 144 FCLQE---------PDIH------------------RIDGLKRML----KEDGVFISVAKHPL 175 (262)
T ss_dssp EESSC---------CCHH------------------HHHHHHTTE----EEEEEEEEEEECTT
T ss_pred EECCC---------ChHH------------------HHHHHHHhc----CCCcEEEEEcCCcc
Confidence 99953 2211 455566665 99999999876643
No 254
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.49 E-value=8.6e-07 Score=84.50 Aligned_cols=116 Identities=19% Similarity=0.159 Sum_probs=81.4
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEecCCCCC------------
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNEL------------ 241 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~---~nv~v~~~D~~~~------------ 241 (496)
+...+||++|+ |..|+.+|.+ . .|+|+++|.++.+.+.+++++++.|+ .+|.+..+|+...
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 45789999997 6777777764 3 58999999999999999999999995 5688999997542
Q ss_pred ---ccc------c-CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 242 ---PKV------L-GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 242 ---~~~------~-~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
+.. . ..+.||.||+|+. +. + .-+..++.++ +|||+||.-
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~----------------k~----------~-~~~~~~l~~l----~~GG~Iv~D 153 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR----------------FR----------V-GCALATAFSI----TRPVTLLFD 153 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS----------------SH----------H-HHHHHHHHHC----SSCEEEEET
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC----------------Cc----------h-hHHHHHHHhc----CCCeEEEEe
Confidence 211 1 1267999999985 00 0 1234456665 999999775
Q ss_pred eCCCCCcCCHHHHHHHHH
Q 010971 312 TCSIMVTENEAVIDYALK 329 (496)
Q Consensus 312 TCSi~~eENE~vV~~~L~ 329 (496)
..+.. .....|..++.
T Consensus 154 Nv~~r--~~y~~v~~~~~ 169 (202)
T 3cvo_A 154 DYSQR--RWQHQVEEFLG 169 (202)
T ss_dssp TGGGC--SSGGGGHHHHC
T ss_pred CCcCC--cchHHHHHHHh
Confidence 44333 23344455553
No 255
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.48 E-value=1.1e-06 Score=86.84 Aligned_cols=111 Identities=13% Similarity=0.144 Sum_probs=78.6
Q ss_pred CCCeEeeccCCC---chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc---------cc
Q 010971 178 EKERVIDMAAAP---GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---------VL 245 (496)
Q Consensus 178 ~g~~VLDmcAgp---GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~---------~~ 245 (496)
+..+|||+|||+ |..+..++... +.+.|+++|+|+..++.+++++.. ..++.++.+|+..... .+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccC
Confidence 457999999999 98765555544 347999999999999999998843 3468999999976421 12
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
....||.|++- +++..-|+ ++ ...+|..+.+.| +|||+|+.++...
T Consensus 154 d~~~~d~v~~~------~vlh~~~d-------~~-------~~~~l~~~~~~L----~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 DFSRPAAIMLV------GMLHYLSP-------DV-------VDRVVGAYRDAL----APGSYLFMTSLVD 199 (274)
T ss_dssp CTTSCCEEEET------TTGGGSCT-------TT-------HHHHHHHHHHHS----CTTCEEEEEEEBC
T ss_pred CCCCCEEEEEe------chhhhCCc-------HH-------HHHHHHHHHHhC----CCCcEEEEEEecC
Confidence 23579999873 22211111 11 245678888876 9999999988764
No 256
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.47 E-value=1.9e-07 Score=91.93 Aligned_cols=87 Identities=16% Similarity=0.202 Sum_probs=70.6
Q ss_pred chhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc--c
Q 010971 167 SFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK--V 244 (496)
Q Consensus 167 S~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~--~ 244 (496)
....+..+++.+|++|||+|||+|..|..|+... +.|+|+|+|+..+..+++++.. ..++.++++|+..++- .
T Consensus 18 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 18 LQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGS
T ss_pred HHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHh
Confidence 3445667788999999999999999999888752 6899999999999999999875 4689999999988742 1
Q ss_pred cCCCCcCEEEECCCC
Q 010971 245 LGLNTVDRVLLDAPC 259 (496)
Q Consensus 245 ~~~~~fD~VLlDaPC 259 (496)
.....|| |+.++|+
T Consensus 93 ~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 93 KTDKPLR-VVGNLPY 106 (255)
T ss_dssp CCSSCEE-EEEECCH
T ss_pred ccCCCeE-EEecCCc
Confidence 1124677 8899993
No 257
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.44 E-value=1.3e-07 Score=92.98 Aligned_cols=77 Identities=19% Similarity=0.207 Sum_probs=51.0
Q ss_pred CCCCCeEeeccCCCchHHHHHHHH--cCC-CcEEEEEeC--CHHHHHHHHHHHHHcCCCeEEEEec-CCCCCccccCCCC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAAL--MKN-TGLIYANEM--KASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNT 249 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l--~~~-~g~V~A~D~--s~~rl~~l~~nl~r~g~~nv~v~~~-D~~~~~~~~~~~~ 249 (496)
++||.+|||+||||||+|.+++++ ++. .|.++|+|+ .+-.. ...|+.-+.+..+ |++.+. ...
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~~----~~~ 139 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYKP----SEI 139 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGSC----CCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCCC----CCC
Confidence 578999999999999999999887 432 467788883 22100 0023333455556 887643 357
Q ss_pred cCEEEECCCCCCCCc
Q 010971 250 VDRVLLDAPCSGTGV 264 (496)
Q Consensus 250 fD~VLlDaPCSg~G~ 264 (496)
||+||+|.--+ +|.
T Consensus 140 ~DvVLSDMAPn-SG~ 153 (269)
T 2px2_A 140 SDTLLCDIGES-SPS 153 (269)
T ss_dssp CSEEEECCCCC-CSC
T ss_pred CCEEEeCCCCC-CCc
Confidence 99999994334 663
No 258
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.41 E-value=3.4e-07 Score=88.99 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=71.9
Q ss_pred EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Q 010971 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|.++.......+..+++.++.+|||+|||+|..|..++... +.|+|+|+|+..++.+++++.. ..++.++++|+.
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~ 86 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDIL 86 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGG
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHH
Confidence 43443333444566677889999999999999999999873 6899999999999999998864 357999999998
Q ss_pred CCccccCCCCcCEEEECCCC
Q 010971 240 ELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 240 ~~~~~~~~~~fD~VLlDaPC 259 (496)
.++... ...| .|+.|+|+
T Consensus 87 ~~~~~~-~~~~-~vv~nlPy 104 (244)
T 1qam_A 87 QFKFPK-NQSY-KIFGNIPY 104 (244)
T ss_dssp GCCCCS-SCCC-EEEEECCG
T ss_pred hCCccc-CCCe-EEEEeCCc
Confidence 775211 1345 78999995
No 259
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.40 E-value=2.1e-07 Score=92.90 Aligned_cols=84 Identities=20% Similarity=0.213 Sum_probs=71.7
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc---CC
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GL 247 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~---~~ 247 (496)
+.+|++++|..+||+++|.||.|..|++. .|.|+|+|.++..++.+++ +.. .++.+++.|+..+...+ +.
T Consensus 15 le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g~ 87 (285)
T 1wg8_A 15 LDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALGV 87 (285)
T ss_dssp HHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTTC
T ss_pred HHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcCC
Confidence 56678899999999999999999999987 4899999999999999888 644 57999999998875443 22
Q ss_pred CCcCEEEECCCCCC
Q 010971 248 NTVDRVLLDAPCSG 261 (496)
Q Consensus 248 ~~fD~VLlDaPCSg 261 (496)
..||.||+|.++|.
T Consensus 88 ~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 88 ERVDGILADLGVSS 101 (285)
T ss_dssp SCEEEEEEECSCCH
T ss_pred CCcCEEEeCCcccc
Confidence 57999999999886
No 260
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.40 E-value=3e-07 Score=96.11 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=73.1
Q ss_pred CCCeEeeccCC------CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc--c--CC
Q 010971 178 EKERVIDMAAA------PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV--L--GL 247 (496)
Q Consensus 178 ~g~~VLDmcAg------pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~--~--~~ 247 (496)
++.+|||+||| +||.++.++..+.+.+.|+++|+++.+. ....++.++.+|+..++.. + ..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 56899999999 7888888887654458999999999862 2346799999999886532 0 02
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+.||+|++|.- - .. .-+...|..+.+.| ||||+++.++..
T Consensus 287 ~sFDlVisdgs----H------------~~-------~d~~~aL~el~rvL----KPGGvlVi~Dl~ 326 (419)
T 3sso_A 287 GPFDIVIDDGS----H------------IN-------AHVRTSFAALFPHV----RPGGLYVIEDMW 326 (419)
T ss_dssp CCEEEEEECSC----C------------CH-------HHHHHHHHHHGGGE----EEEEEEEEECGG
T ss_pred CCccEEEECCc----c------------cc-------hhHHHHHHHHHHhc----CCCeEEEEEecc
Confidence 78999998641 0 00 12344566666665 999999998654
No 261
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.36 E-value=4.1e-07 Score=90.68 Aligned_cols=114 Identities=13% Similarity=0.097 Sum_probs=79.0
Q ss_pred CCeEeeccCCC--chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccC----CCCcC-
Q 010971 179 KERVIDMAAAP--GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG----LNTVD- 251 (496)
Q Consensus 179 g~~VLDmcAgp--GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~----~~~fD- 251 (496)
-.+|||+|||+ |+.+..+++...+...|+++|.|+.++..+++++...+..++.++..|++.+...+. ...||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 36899999997 666777887765668999999999999999998876555679999999988632211 13455
Q ss_pred ----EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 252 ----RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 252 ----~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.|++.+ ++- |--..+ ....+|....+.| +|||+|+.++.+-
T Consensus 159 ~~p~av~~~a------vLH------~l~d~~-------~p~~~l~~l~~~L----~PGG~Lvls~~~~ 203 (277)
T 3giw_A 159 TRPVALTVIA------IVH------FVLDED-------DAVGIVRRLLEPL----PSGSYLAMSIGTA 203 (277)
T ss_dssp TSCCEEEEES------CGG------GSCGGG-------CHHHHHHHHHTTS----CTTCEEEEEEECC
T ss_pred CCcchHHhhh------hHh------cCCchh-------hHHHHHHHHHHhC----CCCcEEEEEeccC
Confidence 455422 221 111100 0134677777765 9999999998664
No 262
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.36 E-value=2.6e-06 Score=86.48 Aligned_cols=112 Identities=13% Similarity=0.014 Sum_probs=77.8
Q ss_pred HhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccccCCCCc
Q 010971 172 MALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 172 ~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~~~~~f 250 (496)
..++..++.+|||+|||+|..+..++...++ ..++++|++ ..+. ++++...+.. ++.+..+|+.. + .+ .|
T Consensus 178 ~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~-~--~p--~~ 248 (348)
T 3lst_A 178 RAGDFPATGTVADVGGGRGGFLLTVLREHPG-LQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR-E--VP--HA 248 (348)
T ss_dssp HHSCCCSSEEEEEETCTTSHHHHHHHHHCTT-EEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT-C--CC--CC
T ss_pred HhCCccCCceEEEECCccCHHHHHHHHHCCC-CEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC-C--CC--CC
Confidence 4456678899999999999999999998754 689999994 3333 3334444544 58999999852 1 22 79
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM 316 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~ 316 (496)
|+|++-- + ...|...+ ...+|.++.+.| +|||+|+..+..+.
T Consensus 249 D~v~~~~------v-------lh~~~d~~-------~~~~L~~~~~~L----kpgG~l~i~e~~~~ 290 (348)
T 3lst_A 249 DVHVLKR------I-------LHNWGDED-------SVRILTNCRRVM----PAHGRVLVIDAVVP 290 (348)
T ss_dssp SEEEEES------C-------GGGSCHHH-------HHHHHHHHHHTC----CTTCEEEEEECCBC
T ss_pred cEEEEeh------h-------ccCCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEeccC
Confidence 9998721 1 11233222 145788888876 99999998876544
No 263
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.33 E-value=1.6e-06 Score=85.41 Aligned_cols=131 Identities=17% Similarity=0.128 Sum_probs=87.8
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHc------CCC-----cEEEEEeCCH---HHHH-----------HHHHHHHHc----
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALM------KNT-----GLIYANEMKA---SRLK-----------SLTANLHRM---- 226 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~------~~~-----g~V~A~D~s~---~rl~-----------~l~~nl~r~---- 226 (496)
..++.+|||+|+|+|..++.+++.. .+. ..++++|..+ ..+. .+++++..+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 4466899999999999999887764 332 4899999876 5444 344555541
Q ss_pred ----------CCCeEEEEecCCCCC-ccccC--CCCcCEEEECC--CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHH
Q 010971 227 ----------GVTNTIVCNYDGNEL-PKVLG--LNTVDRVLLDA--PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLI 291 (496)
Q Consensus 227 ----------g~~nv~v~~~D~~~~-~~~~~--~~~fD~VLlDa--PCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL 291 (496)
+..++.++.+|+... +.... ...||+|++|+ | .++|++ |+ .++|
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp-------~~~p~l---w~-----------~~~l 196 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAP-------AKNPDM---WT-----------QNLF 196 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCT-------TTCGGG---CC-----------HHHH
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCc-------ccChhh---cC-----------HHHH
Confidence 224677889998774 43210 12799999997 4 346654 22 2456
Q ss_pred HHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEeec
Q 010971 292 LAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 292 ~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~~ 338 (496)
....+++ +|||+|+.-||. ..|...|...+|.+...
T Consensus 197 ~~l~~~L----~pGG~l~tysaa-------~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 197 NAMARLA----RPGGTLATFTSA-------GFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp HHHHHHE----EEEEEEEESCCB-------HHHHHHHHHHTEEEEEE
T ss_pred HHHHHHc----CCCcEEEEEeCC-------HHHHHHHHHCCCEEEeC
Confidence 6666765 999999843332 36777777778877654
No 264
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.32 E-value=1.8e-06 Score=85.88 Aligned_cols=108 Identities=15% Similarity=0.168 Sum_probs=74.7
Q ss_pred CCCeEeeccCCCch----HHHHHHHHcCC---CcEEEEEeCCHHHHHHHHHHHH--------------H-----------
Q 010971 178 EKERVIDMAAAPGG----KTTYIAALMKN---TGLIYANEMKASRLKSLTANLH--------------R----------- 225 (496)
Q Consensus 178 ~g~~VLDmcAgpGg----KT~~lA~l~~~---~g~V~A~D~s~~rl~~l~~nl~--------------r----------- 225 (496)
++.+|||+|||+|- .++.|+..++. ...|+|+|+|+..|+.+++++- +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 56666666542 2489999999999999998751 1
Q ss_pred -cCC-----CeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhh
Q 010971 226 -MGV-----TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVD 299 (496)
Q Consensus 226 -~g~-----~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~ 299 (496)
+.+ .+|.+...|....+-.. .+.||+|+|- .++ .-..+ ..|.+++....+.|
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~-~~~fDlI~cr------nvl-------iyf~~-------~~~~~vl~~~~~~L- 242 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNV-PGPFDAIFCR------NVM-------IYFDK-------TTQEDILRRFVPLL- 242 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCC-CCCEEEEEEC------SSG-------GGSCH-------HHHHHHHHHHGGGE-
T ss_pred ceeechhhcccCeEEecccCCCCCCc-CCCeeEEEEC------Cch-------HhCCH-------HHHHHHHHHHHHHh-
Confidence 111 25888999987743111 3689999981 111 11121 23677888888876
Q ss_pred hcCCCCcEEEE
Q 010971 300 ANSKSGGYIVY 310 (496)
Q Consensus 300 ~~lkpGG~LVY 310 (496)
+|||+|+.
T Consensus 243 ---~pgG~L~l 250 (274)
T 1af7_A 243 ---KPDGLLFA 250 (274)
T ss_dssp ---EEEEEEEE
T ss_pred ---CCCcEEEE
Confidence 99999986
No 265
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.32 E-value=8.9e-07 Score=88.88 Aligned_cols=98 Identities=17% Similarity=0.150 Sum_probs=65.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEE-EecCCCCCc-cccCCCCcCEEEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIV-CNYDGNELP-KVLGLNTVDRVLL 255 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v-~~~D~~~~~-~~~~~~~fD~VLl 255 (496)
+|.+|||+|||+|+.|..+++. +.+.|+|+|+++.+++...++- ..+.. ...|++.+. ..++...||.|++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~~-----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~ 157 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQD-----DRVRSMEQYNFRYAEPVDFTEGLPSFASI 157 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHTC-----TTEEEECSCCGGGCCGGGCTTCCCSEEEE
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHhC-----cccceecccCceecchhhCCCCCCCEEEE
Confidence 5789999999999999988886 4579999999999887633221 12222 223333332 1122245999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|...... ..+|..+.++| +|||+||..
T Consensus 158 d~sf~sl-------------------------~~vL~e~~rvL----kpGG~lv~l 184 (291)
T 3hp7_A 158 DVSFISL-------------------------NLILPALAKIL----VDGGQVVAL 184 (291)
T ss_dssp CCSSSCG-------------------------GGTHHHHHHHS----CTTCEEEEE
T ss_pred EeeHhhH-------------------------HHHHHHHHHHc----CcCCEEEEE
Confidence 8753211 23567777765 999999986
No 266
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.32 E-value=9.4e-07 Score=88.07 Aligned_cols=95 Identities=15% Similarity=0.164 Sum_probs=71.3
Q ss_pred EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC
Q 010971 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG 238 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~ 238 (496)
|..+..-....+..+.+.++++|||+|||+|..|..|+..... .+.|+|+|+|+..+..++++. ..++.++++|+
T Consensus 24 fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~ 99 (279)
T 3uzu_A 24 FLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDA 99 (279)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCG
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECCh
Confidence 4433333334566778889999999999999999999987643 356999999999999999983 45799999999
Q ss_pred CCCcc--ccCCC--CcCEEEECCC
Q 010971 239 NELPK--VLGLN--TVDRVLLDAP 258 (496)
Q Consensus 239 ~~~~~--~~~~~--~fD~VLlDaP 258 (496)
..++- ..... ..+.|+.+.|
T Consensus 100 ~~~~~~~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 100 LTFDFGSIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp GGCCGGGGSCSSSSCCEEEEEECC
T ss_pred hcCChhHhcccccCCceEEEEccC
Confidence 87642 11101 3457889998
No 267
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.32 E-value=5.2e-07 Score=92.04 Aligned_cols=87 Identities=17% Similarity=0.183 Sum_probs=72.8
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCC---
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL--- 247 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~--- 247 (496)
+.+|.++||..+||+++|.||.|..|++.+++.|.|+|+|.++..++.++ + +.-.++.+++.+...+...+..
T Consensus 50 l~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-r---L~~~Rv~lv~~nF~~l~~~L~~~g~ 125 (347)
T 3tka_A 50 VNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-T---IDDPRFSIIHGPFSALGEYVAERDL 125 (347)
T ss_dssp HHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-T---CCCTTEEEEESCGGGHHHHHHHTTC
T ss_pred HHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-h---hcCCcEEEEeCCHHHHHHHHHhcCC
Confidence 56678999999999999999999999999888899999999999998773 3 3335689999998887554421
Q ss_pred -CCcCEEEECCCCCC
Q 010971 248 -NTVDRVLLDAPCSG 261 (496)
Q Consensus 248 -~~fD~VLlDaPCSg 261 (496)
+.+|.||+|-.||.
T Consensus 126 ~~~vDgILfDLGVSS 140 (347)
T 3tka_A 126 IGKIDGILLDLGVSS 140 (347)
T ss_dssp TTCEEEEEEECSCCH
T ss_pred CCcccEEEECCccCH
Confidence 26999999999995
No 268
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.29 E-value=7.4e-07 Score=87.22 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=70.8
Q ss_pred EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Q 010971 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|..+..-....+..+.+.++++|||+|||+|..|..++.. +.+.|+|+|+|+..+..++++ +..++.++++|+.
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDAS 86 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchh
Confidence 4443333344566778889999999999999999988875 247999999999999999887 3457999999998
Q ss_pred CCccccCCCCcCEEEECCCCC
Q 010971 240 ELPKVLGLNTVDRVLLDAPCS 260 (496)
Q Consensus 240 ~~~~~~~~~~fD~VLlDaPCS 260 (496)
.++-..... ...|+.++|+.
T Consensus 87 ~~~~~~~~~-~~~vv~NlPy~ 106 (249)
T 3ftd_A 87 KFPFCSLGK-ELKVVGNLPYN 106 (249)
T ss_dssp TCCGGGSCS-SEEEEEECCTT
T ss_pred hCChhHccC-CcEEEEECchh
Confidence 875221112 33899999963
No 269
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.29 E-value=6.7e-07 Score=88.81 Aligned_cols=94 Identities=15% Similarity=0.040 Sum_probs=73.4
Q ss_pred EEEeCCcchhHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Q 010971 160 YMLQSASSFLPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 160 ~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
|..+..-....+..+++.++ +|||+|||+|..|..|+... +.|+|+|+|+..+..+++++.. .++.++++|+.
T Consensus 29 fL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l 101 (271)
T 3fut_A 29 FLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDAL 101 (271)
T ss_dssp EECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGG
T ss_pred ccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCC---CCEEEEECChh
Confidence 43333333445667788889 99999999999999999863 6899999999999999988762 57999999998
Q ss_pred CCccccCCCCcCEEEECCCCCC
Q 010971 240 ELPKVLGLNTVDRVLLDAPCSG 261 (496)
Q Consensus 240 ~~~~~~~~~~fD~VLlDaPCSg 261 (496)
.++... ...||.|+.+.|+.-
T Consensus 102 ~~~~~~-~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 102 LYPWEE-VPQGSLLVANLPYHI 122 (271)
T ss_dssp GSCGGG-SCTTEEEEEEECSSC
T ss_pred hCChhh-ccCccEEEecCcccc
Confidence 775321 136899999999653
No 270
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.24 E-value=3.6e-06 Score=82.39 Aligned_cols=107 Identities=15% Similarity=0.066 Sum_probs=75.4
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.+..+|||+|||.|-.++.+. +...++|+|+|+..++.+++++.++|. +..+...|...-+ . .+.||+||+-
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~--~-~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAP--P-AEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSC--C-CCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCC--C-CCCcchHHHH
Confidence 356799999999999887655 558999999999999999999999994 6677778876544 2 3689999761
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE-eCCCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS-TCSIM 316 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS-TCSi~ 316 (496)
++ +..|-+.|+..+...++.| +++|.+|-. |-|+.
T Consensus 176 ------------------k~---lh~LE~q~~~~~~~ll~aL----~~~~vvVsfPtksl~ 211 (253)
T 3frh_A 176 ------------------KL---LPLLEREQAGSAMALLQSL----NTPRMAVSFPTRSLG 211 (253)
T ss_dssp ------------------SC---HHHHHHHSTTHHHHHHHHC----BCSEEEEEEECC---
T ss_pred ------------------HH---HHHhhhhchhhHHHHHHHh----cCCCEEEEcChHHhc
Confidence 22 2233344444555667765 887766532 34553
No 271
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.24 E-value=1.1e-05 Score=82.49 Aligned_cols=116 Identities=14% Similarity=0.044 Sum_probs=87.0
Q ss_pred hcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCE
Q 010971 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
.++..+..+|||+|||+|..+..|++..++ ..++..|. +..++.+++++...+..+|.++.+|+...+ . ..+|+
T Consensus 174 ~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~--~--~~~D~ 247 (353)
T 4a6d_A 174 AFDLSVFPLMCDLGGGAGALAKECMSLYPG-CKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP--L--PEADL 247 (353)
T ss_dssp SSCGGGCSEEEEETCTTSHHHHHHHHHCSS-CEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC--C--CCCSE
T ss_pred hcCcccCCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC--C--CCceE
Confidence 345667889999999999999999999875 57888887 788888888887667778999999986543 2 46899
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e 318 (496)
|++ -.+...|+.++. .+||.++.+.+ +|||+|+....-+.+.
T Consensus 248 ~~~-------------~~vlh~~~d~~~-------~~iL~~~~~al----~pgg~lli~e~~~~~~ 289 (353)
T 4a6d_A 248 YIL-------------ARVLHDWADGKC-------SHLLERIYHTC----KPGGGILVIESLLDED 289 (353)
T ss_dssp EEE-------------ESSGGGSCHHHH-------HHHHHHHHHHC----CTTCEEEEEECCCCTT
T ss_pred EEe-------------eeecccCCHHHH-------HHHHHHHHhhC----CCCCEEEEEEeeeCCC
Confidence 987 112334554443 45788888886 9999999888766544
No 272
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.24 E-value=1e-06 Score=91.38 Aligned_cols=107 Identities=6% Similarity=0.023 Sum_probs=72.7
Q ss_pred hcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEE--EEecCCCCCccccCCCCc
Q 010971 173 ALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTI--VCNYDGNELPKVLGLNTV 250 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~--v~~~D~~~~~~~~~~~~f 250 (496)
.+.+.++.+|||+|||+|..+..++.. ...|+++|+|+..++.++++ |+..+. +...|+..++ +..+.|
T Consensus 102 ~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~--~~~~~f 172 (416)
T 4e2x_A 102 TELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVR--RTEGPA 172 (416)
T ss_dssp TTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHH--HHHCCE
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcc--cCCCCE
Confidence 345678999999999999999988875 25899999999999887765 554432 1122222232 123789
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
|+|++. +++..-++ ...+|..+.++| +|||+|+.++-.
T Consensus 173 D~I~~~------~vl~h~~d----------------~~~~l~~~~r~L----kpgG~l~i~~~~ 210 (416)
T 4e2x_A 173 NVIYAA------NTLCHIPY----------------VQSVLEGVDALL----APDGVFVFEDPY 210 (416)
T ss_dssp EEEEEE------SCGGGCTT----------------HHHHHHHHHHHE----EEEEEEEEEEEC
T ss_pred EEEEEC------ChHHhcCC----------------HHHHHHHHHHHc----CCCeEEEEEeCC
Confidence 999973 22222211 234677777776 999999987543
No 273
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.23 E-value=2.3e-06 Score=82.78 Aligned_cols=100 Identities=12% Similarity=0.167 Sum_probs=65.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc-cccCCCCcCEEEEC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP-KVLGLNTVDRVLLD 256 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~-~~~~~~~fD~VLlD 256 (496)
+|.+|||+|||+|+.|..+++. +...|+|+|+++.+++.+.++..+.++ .-..+.+.+. ..+....||.+.+|
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~D 110 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDERVVV----MEQFNFRNAVLADFEQGRPSFTSID 110 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTTEEE----ECSCCGGGCCGGGCCSCCCSEEEEC
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCccccc----cccceEEEeCHhHcCcCCCCEEEEE
Confidence 5779999999999999999886 335999999999998876554433211 1111111111 11211237888888
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
...+.. ..+|..+.++| +|||+|+..+
T Consensus 111 ~v~~~l-------------------------~~~l~~i~rvL----kpgG~lv~~~ 137 (232)
T 3opn_A 111 VSFISL-------------------------DLILPPLYEIL----EKNGEVAALI 137 (232)
T ss_dssp CSSSCG-------------------------GGTHHHHHHHS----CTTCEEEEEE
T ss_pred EEhhhH-------------------------HHHHHHHHHhc----cCCCEEEEEE
Confidence 765431 23577777775 9999999853
No 274
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.23 E-value=1.1e-06 Score=87.22 Aligned_cols=127 Identities=16% Similarity=0.133 Sum_probs=72.1
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
++++.+|||+||||||++..++..++ .+.++++|+..+. ..-.......|. +++....++.... +....||+|++
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl-~~~pi~~~~~g~-~ii~~~~~~dv~~--l~~~~~DlVls 146 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDG-HEKPMNVQSLGW-NIITFKDKTDIHR--LEPVKCDTLLC 146 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTT-CCCCCCCCBTTG-GGEEEECSCCTTT--SCCCCCSEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccC-cccccccCcCCC-CeEEEeccceehh--cCCCCccEEEe
Confidence 46788999999999999988776543 3567788876321 000000011122 4444555442221 23468999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEEeCCCCCcCCHHHHHHH
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYSTCSIMVTENEAVIDYA 327 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG-G~LVYSTCSi~~eENE~vV~~~ 327 (496)
|.--+ +|.. ..+.. .+..||.-|.+.| +|| |.+|.....-+-.+-.+.+..+
T Consensus 147 D~apn-sG~~----------~~D~~-----rs~~LL~~a~~~L----kpG~G~FV~KVf~pyg~~~~~l~~~l 199 (277)
T 3evf_A 147 DIGES-SSSS----------VTEGE-----RTVRVLDTVEKWL----ACGVDNFCVKVLAPYMPDVLEKLELL 199 (277)
T ss_dssp CCCCC-CSCH----------HHHHH-----HHHHHHHHHHHHH----TTCCSEEEEEESCTTSHHHHHHHHHH
T ss_pred cCccC-cCch----------HHHHH-----HHHHHHHHHHHHh----CCCCCeEEEEecCCCCccHHHHHHHH
Confidence 95433 5531 11111 2233477777776 999 9999855443233333444443
No 275
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.20 E-value=2.2e-06 Score=84.84 Aligned_cols=109 Identities=20% Similarity=0.096 Sum_probs=77.0
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDa 257 (496)
+..+|||+|||.|-.++.++... +...++|+|+|+..++.+++|+.++|+. ..+...|...-+ ..+.||+||+-
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~---p~~~~DvaL~l- 205 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDR---LDEPADVTLLL- 205 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSC---CCSCCSEEEET-
T ss_pred CCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccC---CCCCcchHHHH-
Confidence 35699999999999998877754 4579999999999999999999999997 566677765432 23789999872
Q ss_pred CCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE-EeCCCC
Q 010971 258 PCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY-STCSIM 316 (496)
Q Consensus 258 PCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVY-STCSi~ 316 (496)
++ +..|-..|+..+-..++.| +|||.+|- =|-|+.
T Consensus 206 -----------------kt---i~~Le~q~kg~g~~ll~aL----~~~~vvVSfp~ksl~ 241 (281)
T 3lcv_B 206 -----------------KT---LPCLETQQRGSGWEVIDIV----NSPNIVVTFPTKSLG 241 (281)
T ss_dssp -----------------TC---HHHHHHHSTTHHHHHHHHS----SCSEEEEEEECC---
T ss_pred -----------------HH---HHHhhhhhhHHHHHHHHHh----CCCCEEEeccchhhc
Confidence 22 2223333333344677776 89888763 344443
No 276
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.12 E-value=2.7e-06 Score=85.14 Aligned_cols=128 Identities=10% Similarity=0.048 Sum_probs=73.2
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEe-cCCCCCccccCCCCcCEEEE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCN-YDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~-~D~~~~~~~~~~~~fD~VLl 255 (496)
.+|.+|||+||||||+|..+++.++ ...|+++|+......... ....++...+.+.. .|...+ ....||+|++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~-~~~~~~~~iv~~~~~~di~~l----~~~~~DlVls 153 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPI-HMQTLGWNIVKFKDKSNVFTM----PTEPSDTLLC 153 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCC-CCCBTTGGGEEEECSCCTTTS----CCCCCSEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEeccccccccc-cccccCCceEEeecCceeeec----CCCCcCEEee
Confidence 5799999999999999999887653 357889998642100000 00011222222221 133332 2368999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEEeCCCCCcCCHHHHHHHHHh
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYSTCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG-G~LVYSTCSi~~eENE~vV~~~L~~ 330 (496)
|.-.+ +|.. .+... .|..||.-|.+.| +|| |.+|.-....+-.+-.+.+..+-..
T Consensus 154 D~APn-sG~~-------------~~D~~--rs~~LL~~A~~~L----kpG~G~FV~KvF~~yG~~~~~ll~~lk~~ 209 (300)
T 3eld_A 154 DIGES-SSNP-------------LVERD--RTMKVLENFERWK----HVNTENFCVKVLAPYHPDVIEKLERLQLR 209 (300)
T ss_dssp CCCCC-CSSH-------------HHHHH--HHHHHHHHHHHHC----CTTCCEEEEEESSTTSHHHHHHHHHHHHH
T ss_pred cCcCC-CCCH-------------HHHHH--HHHHHHHHHHHHh----cCCCCcEEEEeccccCccHHHHHHHHHHh
Confidence 97767 7742 11111 2344477777765 999 9998754443334444444443333
No 277
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.11 E-value=4.5e-06 Score=83.35 Aligned_cols=106 Identities=19% Similarity=0.184 Sum_probs=67.9
Q ss_pred cCCCCCCeEeeccC------CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCC
Q 010971 174 LAPQEKERVIDMAA------APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcA------gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~ 247 (496)
|.+.-|++|||+|| |||+ ..+.++.+..+.|+++|+.+--. ..+ .++.+|...+.. .
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~~---~ 167 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVHT---A 167 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEEE---S
T ss_pred EeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEcccccccc---C
Confidence 34567999999997 9999 34555544335999999986210 112 447899765432 3
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
..||+||.|.-..-+|... .+.++. . .|.+.|+++....|+|||.+|.=
T Consensus 168 ~k~DLVISDMAPNtTG~~D-~d~~Rs----~----------~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVT-KENDSK----E----------GFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp SCEEEEEECCCCTTSCSSC-SCCCCC----C----------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEecCCCCcCCccc-cchhHH----H----------HHHHHHHHHHHHhCcCCCEEEEE
Confidence 7899999997777777622 111111 1 13444444444556999999863
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.09 E-value=1.1e-06 Score=87.38 Aligned_cols=112 Identities=17% Similarity=0.179 Sum_probs=65.5
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
++++.+|||+||||||++.+++..++ ...|+++|+.......... +..+|. +++....+.... .+....||+||+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~-~~~~g~-~ii~~~~~~dv~--~l~~~~~DvVLS 162 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIM-RTTLGW-NLIRFKDKTDVF--NMEVIPGDTLLC 162 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCGG--GSCCCCCSEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCccccccc-cccCCC-ceEEeeCCcchh--hcCCCCcCEEEe
Confidence 46788999999999999998877653 4578899987541100000 011232 333333222111 123478999999
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC--cEEEEEe
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG--GYIVYST 312 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG--G~LVYST 312 (496)
|.--+ +|.. ..+.. .+..||.-|.+.| +|| |.+|.-.
T Consensus 163 DmApn-sG~~----------~~D~~-----rs~~LL~~A~~~L----k~g~~G~Fv~Kv 201 (282)
T 3gcz_A 163 DIGES-SPSI----------AVEEQ-----RTLRVLNCAKQWL----QEGNYTEFCIKV 201 (282)
T ss_dssp CCCCC-CSCH----------HHHHH-----HHHHHHHHHHHHH----HHHCCCEEEEEE
T ss_pred cCccC-CCCh----------HHHHH-----HHHHHHHHHHHHc----CCCCCCcEEEEE
Confidence 95434 5531 11111 2233477777776 899 9998643
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.08 E-value=1.7e-06 Score=84.95 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=65.9
Q ss_pred hHHHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc--ccC
Q 010971 169 LPVMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK--VLG 246 (496)
Q Consensus 169 l~v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~--~~~ 246 (496)
..+..+.+.+|++|||+|||+|..|. ++. . ..+.|+|+|+|+..+..+++++... .++.++++|+..++- .+.
T Consensus 12 ~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 12 SIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp HHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHHHH
T ss_pred HHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHhhc
Confidence 34566778899999999999999999 643 2 2223999999999999999887653 589999999987642 110
Q ss_pred -CCCcCEEEECCCCC
Q 010971 247 -LNTVDRVLLDAPCS 260 (496)
Q Consensus 247 -~~~fD~VLlDaPCS 260 (496)
.+..|.|+.++|+.
T Consensus 87 ~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 87 KMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHTSCEEEEEECCTT
T ss_pred ccCCceEEEECCCCC
Confidence 02457999999964
No 280
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.04 E-value=5.7e-06 Score=90.02 Aligned_cols=75 Identities=13% Similarity=0.004 Sum_probs=64.9
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
.+.+|||+|||.|..|..||.+ ...|+++|+++..++.++..+...|..++.+.+.|+..+......+.||+|++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEE
Confidence 4679999999999999999986 36899999999999999999999887789999999887744344478999997
No 281
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.02 E-value=2.4e-05 Score=80.32 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=75.6
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..++.+|||+|||+|..+..++...++ ..++++|+ +..++.++. ..++.++.+|+.. + ++ .. |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~p-~~-D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPS-INAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-G--VP-KG-DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--CC-CC-SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-C--CC-CC-CEEEE
Confidence 456789999999999999999998754 68999999 776655432 2578999999875 2 22 23 99987
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
-- +...|+..+. .++|.++.+.| +|||+|+.....+..
T Consensus 268 ~~-------------vlh~~~~~~~-------~~~l~~~~~~L----~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 268 KW-------------ICHDWSDEHC-------LKLLKNCYAAL----PDHGKVIVAEYILPP 305 (368)
T ss_dssp ES-------------CGGGBCHHHH-------HHHHHHHHHHS----CTTCEEEEEECCCCS
T ss_pred ec-------------hhhcCCHHHH-------HHHHHHHHHHc----CCCCEEEEEEeccCC
Confidence 22 1122333322 45788888876 999999998877643
No 282
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.01 E-value=4e-05 Score=77.74 Aligned_cols=104 Identities=14% Similarity=0.150 Sum_probs=75.1
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..++.+|||+|||+|..+..+++..++ ..++++|+ +..++.+++ ..++.+..+|+.. + + ..||+|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~--p~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPK-LKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-S--I--PNADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-C--C--CCCSEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCC-CeEEEeeC-HHHHhhccc------CCCcEEEeccccC-C--C--CCccEEEe
Confidence 356789999999999999999988754 68999999 887765543 2458899999865 2 2 23999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC---CcEEEEEeCCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS---GGYIVYSTCSIM 316 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkp---GG~LVYSTCSi~ 316 (496)
-- ++ ..|...+ ..++|.++.+.| +| ||+|+.+...+.
T Consensus 253 ~~------~l-------h~~~d~~-------~~~~l~~~~~~L----~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 253 KY------IL-------HNWTDKD-------CLRILKKCKEAV----TNDGKRGKVTIIDMVID 292 (352)
T ss_dssp ES------CG-------GGSCHHH-------HHHHHHHHHHHH----SGGGCCCEEEEEECEEC
T ss_pred eh------hh-------ccCCHHH-------HHHHHHHHHHhC----CCCCCCcEEEEEEeecC
Confidence 21 11 1232222 235788888887 99 999998876654
No 283
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.01 E-value=8.9e-06 Score=81.25 Aligned_cols=125 Identities=10% Similarity=0.147 Sum_probs=89.0
Q ss_pred CCeEeeccCCCchHHHHHHHHcC----CCcEEEEEeCCH--------------------------HHHHHHHHHHHHcCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMK----NTGLIYANEMKA--------------------------SRLKSLTANLHRMGV 228 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~----~~g~V~A~D~s~--------------------------~rl~~l~~nl~r~g~ 228 (496)
...||++|++.|+.+++|+..+. ..+.|+++|... .+++.+++|+++.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 45999999999999999998875 257899999631 157789999999998
Q ss_pred --CeEEEEecCCCCC-ccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC
Q 010971 229 --TNTIVCNYDGNEL-PKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG 305 (496)
Q Consensus 229 --~nv~v~~~D~~~~-~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG 305 (496)
.+|.++.+|+.+. +. +....||.|++|+- . ..-....|..++..| +||
T Consensus 187 ~~~~I~li~Gda~etL~~-~~~~~~d~vfIDaD---~---------------------y~~~~~~Le~~~p~L----~pG 237 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPT-APIDTLAVLRMDGD---L---------------------YESTWDTLTNLYPKV----SVG 237 (282)
T ss_dssp CSTTEEEEESCHHHHSTT-CCCCCEEEEEECCC---S---------------------HHHHHHHHHHHGGGE----EEE
T ss_pred CcCceEEEEeCHHHHHhh-CCCCCEEEEEEcCC---c---------------------cccHHHHHHHHHhhc----CCC
Confidence 5799999998653 33 33468999999973 0 001123455666665 999
Q ss_pred cEEEEEeCCCCCcCCHHHHHHHHHhCCc
Q 010971 306 GYIVYSTCSIMVTENEAVIDYALKKRDV 333 (496)
Q Consensus 306 G~LVYSTCSi~~eENE~vV~~~L~~~~~ 333 (496)
|+||.-...+.+.+ ..-|..|++.+++
T Consensus 238 GiIv~DD~~~~~G~-~~Av~Ef~~~~~i 264 (282)
T 2wk1_A 238 GYVIVDDYMMCPPC-KDAVDEYRAKFDI 264 (282)
T ss_dssp EEEEESSCTTCHHH-HHHHHHHHHHTTC
T ss_pred EEEEEcCCCCCHHH-HHHHHHHHHhcCC
Confidence 99998776443433 3444555666653
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.00 E-value=3.1e-06 Score=87.48 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=55.8
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
+.+|++|||+||+|||+|..+++. .+.|+|+|+.+ +...+ +...+|.++..|+..+.. ....||.|++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-----l~~~l--~~~~~V~~~~~d~~~~~~--~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-----MAQSL--MDTGQVTWLREDGFKFRP--TRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-----CCHHH--HTTTCEEEECSCTTTCCC--CSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-----cChhh--ccCCCeEEEeCccccccC--CCCCcCEEEE
Confidence 568999999999999999988875 47999999753 11122 234679999999987643 2368999999
Q ss_pred CCCCC
Q 010971 256 DAPCS 260 (496)
Q Consensus 256 DaPCS 260 (496)
|.-|.
T Consensus 277 Dm~~~ 281 (375)
T 4auk_A 277 DMVEK 281 (375)
T ss_dssp CCSSC
T ss_pred cCCCC
Confidence 98643
No 285
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.00 E-value=3.1e-05 Score=79.35 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=76.0
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..++.+|||+|||+|..+..|+...++ ..++++|+ +..+..++. ..++.++.+|+.. + ++ .. |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~--~p-~~-D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPT-IKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-E--VP-SG-DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--CC-CC-SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCC-CeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-C--CC-CC-CEEEe
Confidence 567899999999999999999998764 68999999 766654432 2578999999875 3 22 23 99987
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMV 317 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~ 317 (496)
-- +...|+..+. .++|.++.+.| +|||+|+.....+..
T Consensus 266 ~~-------------vlh~~~d~~~-------~~~L~~~~~~L----~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 266 KW-------------ILHDWSDQHC-------ATLLKNCYDAL----PAHGKVVLVQCILPV 303 (364)
T ss_dssp ES-------------CGGGSCHHHH-------HHHHHHHHHHS----CTTCEEEEEECCBCS
T ss_pred hH-------------HhccCCHHHH-------HHHHHHHHHHc----CCCCEEEEEEeccCC
Confidence 21 1223443332 45788888876 999999998876543
No 286
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.89 E-value=3.5e-05 Score=78.83 Aligned_cols=103 Identities=10% Similarity=0.065 Sum_probs=74.5
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLL 255 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLl 255 (496)
..++.+|||+|||+|..+..++...++ ..++++|+ +..+..+++ ..++.++.+|+.. + ++ .||+|++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~~--~~D~v~~ 273 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPL-IKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-S--VP--QGDAMIL 273 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--CC--CEEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCC-CeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-C--CC--CCCEEEE
Confidence 567889999999999999999998754 68999999 877765543 2568899999876 3 32 3999997
Q ss_pred CCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 256 DAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 256 DaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
- .++ ..+...+ ...+|.++.+.| +|||+|+.+...+
T Consensus 274 ~------~~l-------h~~~d~~-------~~~~l~~~~~~L----~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 274 K------AVC-------HNWSDEK-------CIEFLSNCHKAL----SPNGKVIIVEFIL 309 (372)
T ss_dssp E------SSG-------GGSCHHH-------HHHHHHHHHHHE----EEEEEEEEEEEEE
T ss_pred e------ccc-------ccCCHHH-------HHHHHHHHHHhc----CCCCEEEEEEecc
Confidence 2 111 1222222 135788888876 9999999886554
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.89 E-value=4.5e-05 Score=74.10 Aligned_cols=80 Identities=23% Similarity=0.219 Sum_probs=55.5
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEec-CCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~-D~~~~~~~~~~~~fD~VL 254 (496)
+.++.+|||+||||||++.+++.+.+ ...|+|+|+-..--. --..++.+|...|.+... |...++. ..+|.||
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe-~P~~~~s~gwn~v~fk~gvDv~~~~~----~~~Dtll 149 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHE-EPVPMSTYGWNIVKLMSGKDVFYLPP----EKCDTLL 149 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSC-CCCCCCCTTTTSEEEECSCCGGGCCC----CCCSEEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCcc-CcchhhhcCcCceEEEeccceeecCC----ccccEEE
Confidence 46899999999999999988777653 358999998643110 000123456667888887 8644432 5699999
Q ss_pred EC-CCCCC
Q 010971 255 LD-APCSG 261 (496)
Q Consensus 255 lD-aPCSg 261 (496)
|| +|.|+
T Consensus 150 cDIgeSs~ 157 (267)
T 3p8z_A 150 CDIGESSP 157 (267)
T ss_dssp ECCCCCCS
T ss_pred EecCCCCC
Confidence 99 66444
No 288
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.87 E-value=7.7e-05 Score=75.82 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=73.8
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEEC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLD 256 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlD 256 (496)
.++.+|||+|||+|..+..++...++ ..++++|+ +..++.++. ..++.++.+|+.. + + ..||+|++-
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~--~~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPH-LKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-S--I--PSADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTT-SEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-C--C--CCCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCC-CeEEEecc-HHHHhhccc------CCCcEEEeCccCC-C--C--CCceEEEEc
Confidence 46789999999999999999998754 68999999 666654432 3568899999876 3 3 259999973
Q ss_pred CCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCC---CcEEEEEeCCCC
Q 010971 257 APCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKS---GGYIVYSTCSIM 316 (496)
Q Consensus 257 aPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkp---GG~LVYSTCSi~ 316 (496)
-. ...+...+ ..++|.++.+.| +| ||+|+.....+.
T Consensus 259 ~v-------------lh~~~d~~-------~~~~l~~~~~~L----~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 259 WV-------------LHDWNDEQ-------SLKILKNSKEAI----SHKGKDGKVIIIDISID 297 (358)
T ss_dssp SC-------------GGGSCHHH-------HHHHHHHHHHHT----GGGGGGCEEEEEECEEC
T ss_pred cc-------------ccCCCHHH-------HHHHHHHHHHhC----CCCCCCcEEEEEEeccC
Confidence 21 11232222 135788888876 99 999998876653
No 289
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.80 E-value=2.3e-05 Score=78.19 Aligned_cols=159 Identities=16% Similarity=0.103 Sum_probs=99.2
Q ss_pred ccEEEecCCCCCCCCcccccccEEEeC-----CcchhH-HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeC
Q 010971 138 VGLVVYDSQVPIGATPEYMAGFYMLQS-----ASSFLP-VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEM 211 (496)
Q Consensus 138 ~gl~v~~~~~~i~~~~~~~~G~~~iQd-----~sS~l~-v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~ 211 (496)
.|++-.++ .....|.||..|..-+-. +...-+ ...+..-.+..+||+++|+|..++.+.. +...++.+|.
T Consensus 46 ~G~Y~L~~-~~a~ktgE~~~GI~rl~~~~~~~p~~l~~yf~~l~~~n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~ 121 (283)
T 2oo3_A 46 RGIYDLKD-KQSLKTEEYKEGINPVWLDRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLR---SQDRLYLCEL 121 (283)
T ss_dssp TSEEETTC-C----CCGGGGTHHHHHHTGGGSCGGGHHHHHHHHHHSSSSSCCEEECHHHHHHHHSC---TTSEEEEECC
T ss_pred cCccCCCC-hHHhhcHHHHHHHHHHHhcccCCcHHHHHHHHHHHHhcCCCceeEeCCcHHHHHHHcC---CCCeEEEEeC
Confidence 45543332 233568899998655532 111001 1111122467799999999999875444 4479999999
Q ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc-c-CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHH
Q 010971 212 KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-L-GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQ 289 (496)
Q Consensus 212 s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~-~-~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~ 289 (496)
++..++.+++|+.. ..++.+.+.|+...... . +...||+||+|||+---+ +.... .+
T Consensus 122 ~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~k~---------------~~~~v----l~ 180 (283)
T 2oo3_A 122 HPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKE---------------EYKEI----PY 180 (283)
T ss_dssp SHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCSTT---------------HHHHH----HH
T ss_pred CHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCCCc---------------HHHHH----HH
Confidence 99999999999976 45689999997553221 1 124699999999953111 11111 22
Q ss_pred HHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHh
Q 010971 290 LILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKK 330 (496)
Q Consensus 290 LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~ 330 (496)
.|..+... -|+|+++. |.|--+...++.+++.
T Consensus 181 ~L~~~~~r-----~~~Gi~v~----WYPi~~~~~~~~~~~~ 212 (283)
T 2oo3_A 181 AIKNAYSK-----FSTGLYCV----WYPVVNKAWTEQFLRK 212 (283)
T ss_dssp HHHHHHHH-----CTTSEEEE----EEEESSHHHHHHHHHH
T ss_pred HHHHhCcc-----CCCeEEEE----EEeccchHHHHHHHHH
Confidence 34444444 68888876 7777777777777664
No 290
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.76 E-value=0.00025 Score=73.40 Aligned_cols=81 Identities=21% Similarity=0.277 Sum_probs=60.7
Q ss_pred CeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc-c-----CCCCcCEE
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-L-----GLNTVDRV 253 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~-~-----~~~~fD~V 253 (496)
.+|||+|||.||.++-+.+. +--.|+|+|+++..++..+.|. .+..+++.|...+... + ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999887765 3346889999999999998885 3456677888776321 1 23679999
Q ss_pred EECCCCCCCCcccC
Q 010971 254 LLDAPCSGTGVISK 267 (496)
Q Consensus 254 LlDaPCSg~G~i~r 267 (496)
+.+|||.+..+..+
T Consensus 76 ~ggpPCQ~fS~ag~ 89 (376)
T 3g7u_A 76 IGGPPCQGFSSIGK 89 (376)
T ss_dssp EECCCCCTTC----
T ss_pred EecCCCCCcccccC
Confidence 99999988876654
No 291
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.68 E-value=3e-05 Score=70.21 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=73.7
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc-cCCCCcCE
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-LGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~-~~~~~fD~ 252 (496)
+.+.+|++|||++||. +++|+++.+++.+++++.. ++.+...|+..++.. +..+.||.
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeE
Confidence 4578899999999885 2389999999998877532 367788888876531 13478999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc------CCHHHHHH
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT------ENEAVIDY 326 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e------ENE~vV~~ 326 (496)
|++-- ....+. ++ ...+|.++.+.| ||||+|+.++-..... -..+.+..
T Consensus 67 V~~~~---~l~~~~--~~----------------~~~~l~~~~r~L----kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 121 (176)
T 2ld4_A 67 ILSGL---VPGSTT--LH----------------SAEILAEIARIL----RPGGCLFLKEPVETAVDNNSKVKTASKLCS 121 (176)
T ss_dssp EEECC---STTCCC--CC----------------CHHHHHHHHHHE----EEEEEEEEEEEEESSSCSSSSSCCHHHHHH
T ss_pred EEECC---hhhhcc--cC----------------HHHHHHHHHHHC----CCCEEEEEEcccccccccccccCCHHHHHH
Confidence 99721 111110 11 034677777876 9999999854221110 12445556
Q ss_pred HHHhCCc
Q 010971 327 ALKKRDV 333 (496)
Q Consensus 327 ~L~~~~~ 333 (496)
.|...++
T Consensus 122 ~l~~aGf 128 (176)
T 2ld4_A 122 ALTLSGL 128 (176)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 6777776
No 292
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.63 E-value=3.3e-05 Score=78.97 Aligned_cols=84 Identities=14% Similarity=0.188 Sum_probs=56.0
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc-ccCCCCcCEEEECC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDRVLLDA 257 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~-~~~~~~fD~VLlDa 257 (496)
..+|||++||.||.++.+...--.-..|+|+|+++..++..+.|... ..+++.|...+.. .+....+|+|+.+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----TQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----SCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----cccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 35899999999999998876511113799999999999999998742 3356788877632 12112699999999
Q ss_pred CCCCCCcccC
Q 010971 258 PCSGTGVISK 267 (496)
Q Consensus 258 PCSg~G~i~r 267 (496)
||-+..+..+
T Consensus 77 PCq~fS~ag~ 86 (343)
T 1g55_A 77 PCQPFTRIGR 86 (343)
T ss_dssp C---------
T ss_pred CCcchhhcCC
Confidence 9988876644
No 293
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.54 E-value=0.00017 Score=73.36 Aligned_cols=81 Identities=19% Similarity=0.227 Sum_probs=62.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDA 257 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDa 257 (496)
.+.+|||+|||.||.++.+.+. +--.|+|+|+++..++..+.|..... +.|...+.... ...+|+|+.+|
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~~-~~~~D~l~~gp 79 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEKT-IPDHDILCAGF 79 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGGG-SCCCSEEEEEC
T ss_pred CCCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHhh-CCCCCEEEECC
Confidence 3578999999999999877654 33578999999999999999974322 57777663221 14699999999
Q ss_pred CCCCCCcccCC
Q 010971 258 PCSGTGVISKD 268 (496)
Q Consensus 258 PCSg~G~i~r~ 268 (496)
||-+..+..+.
T Consensus 80 PCQ~fS~ag~~ 90 (327)
T 2c7p_A 80 PCQAFSISGKQ 90 (327)
T ss_dssp CCTTTCTTSCC
T ss_pred CCCCcchhccc
Confidence 99888766554
No 294
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.38 E-value=0.002 Score=64.51 Aligned_cols=117 Identities=15% Similarity=0.115 Sum_probs=81.2
Q ss_pred HHhcCCCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc--C---CCeEEEEecCCCCCcccc
Q 010971 171 VMALAPQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM--G---VTNTIVCNYDGNELPKVL 245 (496)
Q Consensus 171 v~~L~~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~--g---~~nv~v~~~D~~~~~~~~ 245 (496)
++++.+. ..+||=+|.|-|+..-.++..- +...|+.+|+++.-++.+++-+..+ | -.++.++..|+..+-...
T Consensus 77 ~l~~~p~-pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~ 154 (294)
T 3o4f_A 77 PLLAHGH-AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT 154 (294)
T ss_dssp HHHHSSC-CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS
T ss_pred HHhhCCC-CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc
Confidence 3444444 4689999999999887776543 3458999999999999999887553 2 245999999999886543
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.+.||+|++|.+-- .|. +...+ + .+.+..+.+.| +|||.+|.-+
T Consensus 155 -~~~yDvIi~D~~dp-~~~----~~~L~--t-----------~eFy~~~~~~L----~p~Gv~v~q~ 198 (294)
T 3o4f_A 155 -SQTFDVIISDCTDP-IGP----GESLF--T-----------SAFYEGCKRCL----NPGGIFVAQN 198 (294)
T ss_dssp -SCCEEEEEESCCCC-CCT----TCCSS--C-----------CHHHHHHHHTE----EEEEEEEEEE
T ss_pred -cccCCEEEEeCCCc-CCC----chhhc--C-----------HHHHHHHHHHh----CCCCEEEEec
Confidence 47899999998732 121 11111 1 23455555555 9999998643
No 295
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.32 E-value=0.00019 Score=79.60 Aligned_cols=122 Identities=11% Similarity=0.064 Sum_probs=79.2
Q ss_pred CCeEeeccCCCchHHHHHHHHc---C---------CCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccc-
Q 010971 179 KERVIDMAAAPGGKTTYIAALM---K---------NTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKV- 244 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~---~---------~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~- 244 (496)
+..|||+|||+|-.+...+... + ...+|+|+|.|+..+..++.... +|..+ |.++.+|++++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 3589999999999975433322 2 23499999999988877766665 78876 89999999987421
Q ss_pred --cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC--CCCcCC
Q 010971 245 --LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCS--IMVTEN 320 (496)
Q Consensus 245 --~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS--i~~eEN 320 (496)
...+.+|+|+..-- |.+.- ..+.-+.|..+-+ .|+|||.++=+.|+ +.|-+.
T Consensus 489 ~~~~~ekVDIIVSElm----Gsfl~----------------nEL~pe~Ld~v~r----~Lkp~Gi~iP~~~t~ylaPi~~ 544 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL----GSFGD----------------NELSPECLDGVTG----FLKPTTISIPQKYTSYVKPIMS 544 (745)
T ss_dssp HHTTCCCCSEEEECCC----BTTBG----------------GGSHHHHHHTTGG----GSCTTCEEESCEEEEEEEEEEC
T ss_pred ccCCCCcccEEEEecc----ccccc----------------hhccHHHHHHHHH----hCCCCcEEECCccEEEEEEecC
Confidence 01378999998654 22210 0112234444433 46999999855555 444566
Q ss_pred HHHHH
Q 010971 321 EAVID 325 (496)
Q Consensus 321 E~vV~ 325 (496)
+..-.
T Consensus 545 ~~l~~ 549 (745)
T 3ua3_A 545 THIHQ 549 (745)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.23 E-value=0.00067 Score=67.87 Aligned_cols=77 Identities=17% Similarity=0.150 Sum_probs=52.3
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEec-CCCCCccccCCCCcCEEE
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~-D~~~~~~~~~~~~fD~VL 254 (496)
+.++.+|||+||||||++.+++.+.+ ...|+|+|+-..--. --..++.+|...|++... |...++. ..+|.|+
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he-~P~~~~ql~w~lV~~~~~~Dv~~l~~----~~~D~iv 165 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHE-EPQLVQSYGWNIVTMKSGVDVFYRPS----ECCDTLL 165 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSC-CCCCCCBTTGGGEEEECSCCTTSSCC----CCCSEEE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCcc-CcchhhhcCCcceEEEeccCHhhCCC----CCCCEEE
Confidence 46888999999999999987776643 358999998653100 000012334444777766 8766653 5699999
Q ss_pred ECCC
Q 010971 255 LDAP 258 (496)
Q Consensus 255 lDaP 258 (496)
||.-
T Consensus 166 cDig 169 (321)
T 3lkz_A 166 CDIG 169 (321)
T ss_dssp ECCC
T ss_pred EECc
Confidence 9975
No 297
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.16 E-value=0.0008 Score=69.70 Aligned_cols=121 Identities=13% Similarity=0.120 Sum_probs=78.9
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHc-----CC---CeEEEEecCCCCCcccc--CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRM-----GV---TNTIVCNYDGNELPKVL--GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~-----g~---~nv~v~~~D~~~~~~~~--~~ 247 (496)
+..+||=+|.|-|+....+... + ...|+.+|+++.-++.+++-+..+ .. .++.++..|+..+-+.. ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4579999999999988877654 3 368999999999999998865332 11 23788999998764321 23
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE-EeCCCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY-STCSIM 316 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVY-STCSi~ 316 (496)
..||+|++|++-...+. .|. .. ......++.+..+.+.| +|||.+|. +.|-+.
T Consensus 283 ~~yDvIIvDl~D~~~s~---~p~--------g~-a~~Lft~eFy~~~~~~L----~p~GVlv~Q~~s~~~ 336 (381)
T 3c6k_A 283 REFDYVINDLTAVPIST---SPE--------ED-STWEFLRLILDLSMKVL----KQDGKYFTQGNCVNL 336 (381)
T ss_dssp CCEEEEEEECCSSCCCC---C-------------CHHHHHHHHHHHHHHTE----EEEEEEEEEEEETTC
T ss_pred CceeEEEECCCCCcccC---ccc--------Cc-chHHHHHHHHHHHHHhc----CCCCEEEEecCCCcc
Confidence 57999999975211110 110 00 00123355666666665 99999886 445444
No 298
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.14 E-value=0.00054 Score=75.46 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=78.8
Q ss_pred CCeEeeccCCCchH---HHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEecCCCCCccccCCCCcCEEE
Q 010971 179 KERVIDMAAAPGGK---TTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTN-TIVCNYDGNELPKVLGLNTVDRVL 254 (496)
Q Consensus 179 g~~VLDmcAgpGgK---T~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~n-v~v~~~D~~~~~~~~~~~~fD~VL 254 (496)
+..|||+|||+|-. ++..++......+|+|+|.|+. ...+.+..+.+|..+ |+++++|++++. + ++++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~--L-PEKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWV--A-PEKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCC--C-SSCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceecc--C-CcccCEEE
Confidence 34799999999988 4444444332237999999985 556677888899876 999999999874 2 27899999
Q ss_pred ECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCC--CcCCHHHHHH
Q 010971 255 LDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIM--VTENEAVIDY 326 (496)
Q Consensus 255 lDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~--~eENE~vV~~ 326 (496)
..-= |.+.+. +.. ..+|.++-++ |||||.++=+.|+++ +-+.+..-..
T Consensus 434 SEwM--G~fLl~---------------E~m---levL~Ardr~----LKPgGimiPs~atlyiapi~~~~l~~e 483 (637)
T 4gqb_A 434 SELL--GSFADN---------------ELS---PECLDGAQHF----LKDDGVSIPGEYTSFLAPISSSKLYNE 483 (637)
T ss_dssp CCCC--BTTBGG---------------GCH---HHHHHHHGGG----EEEEEEEESCEEEEEEEEEECHHHHHH
T ss_pred EEcC--cccccc---------------cCC---HHHHHHHHHh----cCCCcEEccccceEEEEEecCHHHHHH
Confidence 7532 222111 111 1345544444 599999986666543 4466654443
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.85 E-value=0.001 Score=67.65 Aligned_cols=78 Identities=13% Similarity=0.142 Sum_probs=57.7
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCCcEE-EEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc-ccCCCCcCEEEEC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNTGLI-YANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDRVLLD 256 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~g~V-~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~-~~~~~~fD~VLlD 256 (496)
.-+|+|+|||.||.++.+.+.--+.-.| +|+|+++..++..+.|.... +.+.|.+.+.. .+....+|+|+..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------cccCChhhcCHHHhccCCCCEEEec
Confidence 4589999999999998776541011356 79999999999999997322 45678777632 1211369999999
Q ss_pred CCCCCC
Q 010971 257 APCSGT 262 (496)
Q Consensus 257 aPCSg~ 262 (496)
|||-+.
T Consensus 84 pPCQ~f 89 (327)
T 3qv2_A 84 PPCQPY 89 (327)
T ss_dssp CCCTTC
T ss_pred CCccCc
Confidence 999998
No 300
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.79 E-value=0.00097 Score=67.91 Aligned_cols=82 Identities=16% Similarity=0.221 Sum_probs=59.1
Q ss_pred CeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc-ccCCCCcCEEEECCC
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK-VLGLNTVDRVLLDAP 258 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~-~~~~~~fD~VLlDaP 258 (496)
-+|+|+|||.||.++-+.+.--+.-.|+|+|+++..++..+.|... ..+.+.|...+.. .+....+|+|+..+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-----~~~~~~DI~~~~~~~~~~~~~D~l~ggpP 78 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-----TNLLNRNIQQLTPQVIKKWNVDTILMSPP 78 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----SCEECCCGGGCCHHHHHHTTCCEEEECCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-----CceeccccccCCHHHhccCCCCEEEecCC
Confidence 4799999999999987766511113588999999999999888642 2345677766532 121136999999999
Q ss_pred CCCCCccc
Q 010971 259 CSGTGVIS 266 (496)
Q Consensus 259 CSg~G~i~ 266 (496)
|-+.....
T Consensus 79 CQ~fS~ag 86 (333)
T 4h0n_A 79 CQPFTRNG 86 (333)
T ss_dssp CCCSEETT
T ss_pred Ccchhhhh
Confidence 98875544
No 301
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.77 E-value=0.0016 Score=65.15 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=61.0
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcE-EEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc-c-CCCCcCEE
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGL-IYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV-L-GLNTVDRV 253 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~-V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~-~-~~~~fD~V 253 (496)
..+.+|||+|||.||.++.+.++ +-... |+|+|+++..++..+.|.. +..+...|.+.+... + ....+|+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~-----~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ-----GKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT-----TCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC-----CCceeCCChHHccHHHhcccCCcCEE
Confidence 45679999999999999877654 11112 6999999999998888752 335667888776321 1 11479999
Q ss_pred EECCCCCCCCccc
Q 010971 254 LLDAPCSGTGVIS 266 (496)
Q Consensus 254 LlDaPCSg~G~i~ 266 (496)
+..+||.+..+..
T Consensus 88 ~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 88 IGGSPCNDLSIVN 100 (295)
T ss_dssp EECCCCGGGBTTC
T ss_pred EecCCCccccccC
Confidence 9999998766554
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.67 E-value=0.0064 Score=61.28 Aligned_cols=131 Identities=16% Similarity=0.085 Sum_probs=79.4
Q ss_pred CCCeEeeccCCCchHHHHHHH---HcCCCcE--EEEEeCCH--------HHHHHHHHH-HHHc---CCCe--EEEEecCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAA---LMKNTGL--IYANEMKA--------SRLKSLTAN-LHRM---GVTN--TIVCNYDG 238 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~---l~~~~g~--V~A~D~s~--------~rl~~l~~n-l~r~---g~~n--v~v~~~D~ 238 (496)
+.-+|||+|=|+|--++...+ ...+... .+++|..+ .-+..+.+. ++.+ .-.+ ..+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 345899999999987643322 2233343 46777532 111222222 2222 1123 35667888
Q ss_pred CCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCc
Q 010971 239 NELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVT 318 (496)
Q Consensus 239 ~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~e 318 (496)
...-..+....||.|++|+= .-+++|+++ + .+++....+++ +|||+|+.-||+
T Consensus 176 ~~~l~~l~~~~~Da~flDgF-----sP~kNPeLW---s-----------~e~f~~l~~~~----~pgg~laTYtaa---- 228 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAF-----SPYKNPELW---T-----------LDFLSLIKERI----DEKGYWVSYSSS---- 228 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCS-----CTTTSGGGG---S-----------HHHHHHHHTTE----EEEEEEEESCCC----
T ss_pred HHHHhhhcccceeEEEeCCC-----CcccCcccC---C-----------HHHHHHHHHHh----CCCcEEEEEeCc----
Confidence 65433333347999999961 126788874 3 34566666765 999999865555
Q ss_pred CCHHHHHHHHHhCCcEEeec
Q 010971 319 ENEAVIDYALKKRDVKLVPC 338 (496)
Q Consensus 319 ENE~vV~~~L~~~~~~lv~~ 338 (496)
..|...|...||.+..+
T Consensus 229 ---g~VRR~L~~aGF~V~k~ 245 (308)
T 3vyw_A 229 ---LSVRKSLLTLGFKVGSS 245 (308)
T ss_dssp ---HHHHHHHHHTTCEEEEE
T ss_pred ---HHHHHHHHHCCCEEEec
Confidence 57889999988887654
No 303
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.64 E-value=0.0062 Score=60.86 Aligned_cols=79 Identities=16% Similarity=0.144 Sum_probs=60.1
Q ss_pred CeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECCCC
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAPC 259 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPC 259 (496)
.+|||++||.||.++-+-+. +--.|+|+|+++..++..+.|.. ..++..|.+.+.... ...+|+|+.-|||
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~~------~~~~~~DI~~i~~~~-~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNHS------AKLIKGDISKISSDE-FPKCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHCC------SEEEESCGGGCCGGG-SCCCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHCC------CCcccCChhhCCHhh-CCcccEEEecCCC
Confidence 37999999999999877553 22378899999999999988852 245678888774321 2579999999999
Q ss_pred CCCCcccC
Q 010971 260 SGTGVISK 267 (496)
Q Consensus 260 Sg~G~i~r 267 (496)
-+..+..+
T Consensus 72 Q~fS~ag~ 79 (331)
T 3ubt_Y 72 QSWSEGGS 79 (331)
T ss_dssp GGTEETTE
T ss_pred CCcCCCCC
Confidence 88765543
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.56 E-value=0.0046 Score=61.38 Aligned_cols=49 Identities=14% Similarity=-0.008 Sum_probs=41.9
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~ 228 (496)
.+|+.|||.+||+|..+..++.+ ...++++|+++..++.+++++.....
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~ 282 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVP 282 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHST
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 68999999999999988765553 25899999999999999999988643
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.55 E-value=0.0053 Score=63.97 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=53.3
Q ss_pred cCCCCCCeEeeccCCCchHHHHHH-HHcCCCcEEEEEeCCHHHHHHHHHHHHH---cCC-CeEEEEec
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIA-ALMKNTGLIYANEMKASRLKSLTANLHR---MGV-TNTIVCNY 236 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA-~l~~~~g~V~A~D~s~~rl~~l~~nl~r---~g~-~nv~v~~~ 236 (496)
+.+.+|..|+|+||..|..|+.++ ...++.+.|+|+|.++.-+..+++|+.. .+. .++.+++.
T Consensus 222 ~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 222 LRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECS
T ss_pred cccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEe
Confidence 345789999999999999999888 4555558999999999999999999998 356 78877654
No 306
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.40 E-value=0.018 Score=59.50 Aligned_cols=131 Identities=11% Similarity=0.079 Sum_probs=71.2
Q ss_pred CCeEeeccCCCchHHHHHHHHc--------------CCCcEEEEEeCCHHHHHHHHHHHHHcC-------------CCeE
Q 010971 179 KERVIDMAAAPGGKTTYIAALM--------------KNTGLIYANEMKASRLKSLTANLHRMG-------------VTNT 231 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~--------------~~~g~V~A~D~s~~rl~~l~~nl~r~g-------------~~nv 231 (496)
..+|+|+|||+|..|+.+...+ .+.-.|+.+|+-..-...+-..+.... ...+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5899999999999999874432 134578888876666555555544321 0111
Q ss_pred EEEecCCCC-CccccCCCCcCEEEECCCCCCCCcccCCchhh--------------cc-CCHHHHHHHH--HHHHHHHHH
Q 010971 232 IVCNYDGNE-LPKVLGLNTVDRVLLDAPCSGTGVISKDESVK--------------TS-KSLEDIQKCS--YLQKQLILA 293 (496)
Q Consensus 232 ~v~~~D~~~-~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k--------------~~-~s~~~i~~l~--~lQ~~LL~~ 293 (496)
++.+.+.. +...++.++||.|+. +..+--+++.|... .. -++. +...- +.|++ +..
T Consensus 133 -f~~gvpgSFy~rlfP~~S~d~v~S---s~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~D-~~~ 206 (374)
T 3b5i_A 133 -FVAGVPGSFYRRLFPARTIDFFHS---AFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK-TTTAYKRQFQAD-LAE 206 (374)
T ss_dssp -EEEEEESCTTSCCSCTTCEEEEEE---ESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH-HHHHHHHHHHHH-HHH
T ss_pred -EEEecChhhhcccCCCcceEEEEe---cceeeeeccCchhhhccccccccCCceEeCCCCHH-HHHHHHHHHHHH-HHH
Confidence 22222222 233345589999986 23333334444221 11 1333 33322 22222 333
Q ss_pred HHHhhhhcCCCCcEEEEEeCCC
Q 010971 294 AIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 294 A~~~l~~~lkpGG~LVYSTCSi 315 (496)
.++.....|+|||++|.++..-
T Consensus 207 fL~~ra~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 207 FLRARAAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCEEEEEEecC
Confidence 3333344469999999988754
No 307
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.14 E-value=0.0045 Score=66.13 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=57.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc-------------
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------------- 244 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~------------- 244 (496)
..-+|||+|||.||.++-+.+. +--.|+|+|+++..++..+.|.... .+..+++.|...+...
T Consensus 87 ~~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~--p~~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCD--PATHHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCC--TTTCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred ccceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccC--CCcceeccchhhhhhccccccchhhHHhh
Confidence 3568999999999999877543 2236899999999999998886211 2234556777655310
Q ss_pred --cCCCCcCEEEECCCCCCCCccc
Q 010971 245 --LGLNTVDRVLLDAPCSGTGVIS 266 (496)
Q Consensus 245 --~~~~~fD~VLlDaPCSg~G~i~ 266 (496)
.....+|+|+.-|||-+..+..
T Consensus 163 i~~~~~~~Dvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 163 IRQHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHHHSCCCSEEEEECCCCCC----
T ss_pred hhhcCCCCCEEEecCCCcchhhhC
Confidence 0114699999999998876654
No 308
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.11 E-value=0.0095 Score=53.88 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=47.7
Q ss_pred CCCCeEeeccCCCc-hHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEE-E
Q 010971 177 QEKERVIDMAAAPG-GKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV-L 254 (496)
Q Consensus 177 ~~g~~VLDmcAgpG-gKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~V-L 254 (496)
.++.+|||+|||+| ..+.+|+... ...|+|+|+++..+. ++..|........ ...||+| .
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~---------------~v~dDiF~P~~~~-Y~~~DLIYs 95 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG---------------IVRDDITSPRMEI-YRGAALIYS 95 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT---------------EECCCSSSCCHHH-HTTEEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc---------------eEEccCCCCcccc-cCCcCEEEE
Confidence 45789999999999 5888887643 246999999987665 6777776532111 1489999 8
Q ss_pred ECCC
Q 010971 255 LDAP 258 (496)
Q Consensus 255 lDaP 258 (496)
+.||
T Consensus 96 irPP 99 (153)
T 2k4m_A 96 IRPP 99 (153)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 9998
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.97 E-value=0.011 Score=60.62 Aligned_cols=82 Identities=16% Similarity=0.073 Sum_probs=60.8
Q ss_pred cccEEEeCCc-chhHHHhcCCCC------CCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC
Q 010971 157 AGFYMLQSAS-SFLPVMALAPQE------KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT 229 (496)
Q Consensus 157 ~G~~~iQd~s-S~l~v~~L~~~~------g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~ 229 (496)
-|.-.+-|+. ..-.+.++++.+ ++.|||+|.|+|..|..|+.... ...|+|+|+++.-+..|+..+ ...
T Consensus 30 lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~---~~~ 105 (353)
T 1i4w_A 30 YGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF---EGS 105 (353)
T ss_dssp GGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT---TTS
T ss_pred CCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc---cCC
Confidence 3433343443 233456666654 58999999999999999998643 257999999999888888776 246
Q ss_pred eEEEEecCCCCCc
Q 010971 230 NTIVCNYDGNELP 242 (496)
Q Consensus 230 nv~v~~~D~~~~~ 242 (496)
++.++++|+..+.
T Consensus 106 ~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 106 PLQILKRDPYDWS 118 (353)
T ss_dssp SCEEECSCTTCHH
T ss_pred CEEEEECCccchh
Confidence 8999999997653
No 310
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.84 E-value=0.011 Score=57.42 Aligned_cols=50 Identities=14% Similarity=0.193 Sum_probs=39.9
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGV 228 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~ 228 (496)
..+|+.|||.+||+|..+.....+ + ..++++|+++..+..+++|+..+++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~-g--r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKL-G--RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc-C--CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 368999999999999877654443 2 5899999999999999999987765
No 311
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.70 E-value=0.026 Score=56.97 Aligned_cols=99 Identities=23% Similarity=0.323 Sum_probs=63.1
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecC---CCCC----cccc
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD---GNEL----PKVL 245 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D---~~~~----~~~~ 245 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.|++.+ +.+|.+.+ +..+ ...+ ....
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a----~~lGa~~v--i~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKA----KEIGADLV--LQISKESPQEIARKVEGQL 239 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHH----HHTTCSEE--EECSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHH----HHhCCCEE--EcCcccccchHHHHHHHHh
Confidence 4688999999998754 445555665553 23899999999998765 45788643 2322 0111 1111
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
. ..||+||- |+|.. ..+..+++++ ++||++|...
T Consensus 240 ~-~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~G 273 (356)
T 1pl8_A 240 G-CKPEVTIE---CTGAE-------------------------ASIQAGIYAT----RSGGTLVLVG 273 (356)
T ss_dssp T-SCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEECS
T ss_pred C-CCCCEEEE---CCCCh-------------------------HHHHHHHHHh----cCCCEEEEEe
Confidence 2 47999975 44321 1356677776 9999998643
No 312
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.62 E-value=0.089 Score=54.51 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=45.6
Q ss_pred CCeEeeccCCCchHHHHHHHHc----------------CCCcEEEEEeCCHHHH-------HHHHHHH-HHcCC-CeEEE
Q 010971 179 KERVIDMAAAPGGKTTYIAALM----------------KNTGLIYANEMKASRL-------KSLTANL-HRMGV-TNTIV 233 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~----------------~~~g~V~A~D~s~~rl-------~~l~~nl-~r~g~-~nv~v 233 (496)
..+|+|+|||+|..|+.+.+.+ .+.-.|+.+|+-..=. ....+.+ +..|- .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 4789999999999999877661 1234788999762211 1111111 22332 12234
Q ss_pred EecCCCCC-ccccCCCCcCEEEE
Q 010971 234 CNYDGNEL-PKVLGLNTVDRVLL 255 (496)
Q Consensus 234 ~~~D~~~~-~~~~~~~~fD~VLl 255 (496)
+.+.+..| ...++.++||.|+.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~S 155 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHS 155 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEE
T ss_pred EEecchhhhhccCCCCceEEEEe
Confidence 44554443 44556689999975
No 313
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.59 E-value=0.039 Score=55.21 Aligned_cols=97 Identities=20% Similarity=0.231 Sum_probs=65.3
Q ss_pred CCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--CCCCcC
Q 010971 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--GLNTVD 251 (496)
Q Consensus 175 ~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--~~~~fD 251 (496)
.+++|++||-.+||+ |..++++|..++ ..|+++|.++.+++.+ +++|.+.+ ++.+...+.... ..+.+|
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~----~~lGa~~~--i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLA----RRLGAEVA--VNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHH----HHTTCSEE--EETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHH----HHcCCCEE--EeCCCcCHHHHHHHhCCCCC
Confidence 578999999998876 666677777664 4899999999998865 45787653 333322221111 013799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.|+.. +|.+ ..+..+++++ ++||++|..
T Consensus 235 ~vid~---~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 262 (340)
T 3s2e_A 235 GVLVT---AVSP-------------------------KAFSQAIGMV----RRGGTIALN 262 (340)
T ss_dssp EEEES---SCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred EEEEe---CCCH-------------------------HHHHHHHHHh----ccCCEEEEe
Confidence 99863 3322 2367777876 999999864
No 314
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.56 E-value=0.028 Score=56.52 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=62.7
Q ss_pred CCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+++|++||-.+||+ |..++++|..++ ..|+++|.++.+++.+ +.+|.+.+. .|... +. ..||+|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~----~~lGa~~v~---~~~~~----~~-~~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDA----LSMGVKHFY---TDPKQ----CK-EELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHH----HHTTCSEEE---SSGGG----CC-SCEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHH----HhcCCCeec---CCHHH----Hh-cCCCEE
Confidence 678999999998754 455556666553 4899999999998865 458887654 33222 21 379999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|- |+|.. ..+..+++++ ++||++|..
T Consensus 239 id---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 264 (348)
T 3two_A 239 IS---TIPTH-------------------------YDLKDYLKLL----TYNGDLALV 264 (348)
T ss_dssp EE---CCCSC-------------------------CCHHHHHTTE----EEEEEEEEC
T ss_pred EE---CCCcH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 75 44432 0256777876 999999864
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.51 E-value=0.037 Score=56.32 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=64.2
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc------cC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV------LG 246 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~------~~ 246 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.+++.++ .+|...+ ++....++... ..
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAE----EVGATAT--VDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTCSEE--ECTTSSCHHHHHHSTTSSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCCCEE--ECCCCcCHHHHHHhhhhcc
Confidence 4678999999998754 444555665553 248999999999987654 4787653 33322222111 11
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+.||+||- |+|.+ ..+..+++++ ++||++|..
T Consensus 251 ~gg~Dvvid---~~G~~-------------------------~~~~~~~~~l----~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIE---CAGVA-------------------------ETVKQSTRLA----KAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEE---CSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred CCCCCEEEE---CCCCH-------------------------HHHHHHHHHh----ccCCEEEEE
Confidence 247999975 55543 2367778876 999999863
No 316
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.30 E-value=0.14 Score=51.35 Aligned_cols=98 Identities=19% Similarity=0.259 Sum_probs=61.7
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC-CCCccc----cC-
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPKV----LG- 246 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~-~~~~~~----~~- 246 (496)
..+++|++||-.+||+ |..++++|..++ ..|+++|.++.+++.++ .+|.+.+ ++.+- ..+... ..
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~--~~~~~~~~~~~~i~~~~~~ 235 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGADVT--LVVDPAKEEESSIIERIRS 235 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSEE--EECCTTTSCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCCEE--EcCcccccHHHHHHHHhcc
Confidence 4678999999998654 444455555543 35999999999988664 5788643 23221 222111 11
Q ss_pred --CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 247 --LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 247 --~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
...||+||- |+|.. ..+..+++++ ++||++|..
T Consensus 236 ~~g~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 270 (352)
T 1e3j_A 236 AIGDLPNVTID---CSGNE-------------------------KCITIGINIT----RTGGTLMLV 270 (352)
T ss_dssp HSSSCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEEC
T ss_pred ccCCCCCEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 247999985 33321 1356677776 999999864
No 317
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.27 E-value=0.02 Score=58.63 Aligned_cols=111 Identities=16% Similarity=0.209 Sum_probs=64.2
Q ss_pred CCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCC-Cc----cccCCC
Q 010971 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE-LP----KVLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~-~~----~~~~~~ 248 (496)
.+++|++||-++||+ |..++++|..++ ...|+++|.++.|++.++ .+|.. + ++..... +. ......
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~----~lGa~-~--i~~~~~~~~~~~v~~~t~g~ 253 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAK----AQGFE-I--ADLSLDTPLHEQIAALLGEP 253 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCE-E--EETTSSSCHHHHHHHHHSSS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHH----HcCCc-E--EccCCcchHHHHHHHHhCCC
Confidence 678999999988755 555566666653 237999999999988764 57874 2 3332211 11 111224
Q ss_pred CcCEEEECCCCCCCCcccCCchh-hccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESV-KTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~-k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.||+||- |+|........+. ...+. ...+..+++++ ++||++|..
T Consensus 254 g~Dvvid---~~G~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l----~~~G~iv~~ 299 (398)
T 1kol_A 254 EVDCAVD---AVGFEARGHGHEGAKHEAP-----------ATVLNSLMQVT----RVAGKIGIP 299 (398)
T ss_dssp CEEEEEE---CCCTTCBCSSTTGGGSBCT-----------THHHHHHHHHE----EEEEEEEEC
T ss_pred CCCEEEE---CCCCcccccccccccccch-----------HHHHHHHHHHH----hcCCEEEEe
Confidence 7999975 5543211000000 00000 11366777887 999998764
No 318
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.24 E-value=0.016 Score=59.48 Aligned_cols=112 Identities=20% Similarity=0.234 Sum_probs=65.9
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCC-cc----ccCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-PK----VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~-~~----~~~~ 247 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.|++.+ +.+|.. +++.+...+ .. ....
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a----~~lGa~---~i~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLL----SDAGFE---TIDLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHH----HTTTCE---EEETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHH----HHcCCc---EEcCCCcchHHHHHHHHhCC
Confidence 3578999999999866 666677777664 34899999999998765 457873 334332222 11 1122
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
..||+||- |+|.......+++..... -..+..+++++ ++||++|..
T Consensus 253 ~g~Dvvid---~~g~~~~~~~~~~~~~~~-----------~~~~~~~~~~l----~~gG~iv~~ 298 (398)
T 2dph_A 253 PEVDCGVD---AVGFEAHGLGDEANTETP-----------NGALNSLFDVV----RAGGAIGIP 298 (398)
T ss_dssp SCEEEEEE---CSCTTCBCSGGGTTSBCT-----------THHHHHHHHHE----EEEEEEECC
T ss_pred CCCCEEEE---CCCCcccccccccccccc-----------HHHHHHHHHHH----hcCCEEEEe
Confidence 37999975 444321000000000000 01366777876 999998753
No 319
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.16 E-value=0.012 Score=65.11 Aligned_cols=131 Identities=18% Similarity=0.104 Sum_probs=80.2
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcC---------C--CcEEEEEeC---CHHHHHHHH-----------HHHHHc-----
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMK---------N--TGLIYANEM---KASRLKSLT-----------ANLHRM----- 226 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~---------~--~g~V~A~D~---s~~rl~~l~-----------~nl~r~----- 226 (496)
++.-+|||+|-|+|...+.+.+... . .-.++++|. +..-+..+. +.+..+
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 3456999999999999988777641 1 136899999 444444321 112222
Q ss_pred CC-----C----eEEEEecCCCCCccccC---CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHH
Q 010971 227 GV-----T----NTIVCNYDGNELPKVLG---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA 294 (496)
Q Consensus 227 g~-----~----nv~v~~~D~~~~~~~~~---~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A 294 (496)
|+ . .+.+..+|+...-..+. ...||.+++|+.. -.++|+++ +. +++...
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~-----p~~np~~w---~~-----------~~~~~l 197 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA-----PAKNPDMW---NE-----------QLFNAM 197 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC-----C--CCTTC---SH-----------HHHHHH
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC-----CCCChhhh---hH-----------HHHHHH
Confidence 22 1 24566778765422221 3679999999752 24677753 32 344444
Q ss_pred HHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEee
Q 010971 295 IDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 295 ~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~ 337 (496)
.+++ +|||++...||. ..|...|...++.+..
T Consensus 198 ~~~~----~~g~~~~t~~~~-------~~vr~~l~~aGf~~~~ 229 (689)
T 3pvc_A 198 ARMT----RPGGTFSTFTAA-------GFVRRGLQQAGFNVTK 229 (689)
T ss_dssp HHHE----EEEEEEEESCCC-------HHHHHHHHHTTCEEEE
T ss_pred HHHh----CCCCEEEeccCc-------HHHHHHHHhCCeEEEe
Confidence 5554 999998766665 4677778887776654
No 320
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.96 E-value=0.035 Score=55.65 Aligned_cols=97 Identities=14% Similarity=0.134 Sum_probs=64.7
Q ss_pred CCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc----cCCCC
Q 010971 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV----LGLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~----~~~~~ 249 (496)
.+++|++||-.+||+ |..++++|..++ ...|+++|.++.|++.+ +.+|.+.+. ..+. .+... .....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~----~~lGa~~~i--~~~~-~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALA----REVGADAAV--KSGA-GAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHH----HHTTCSEEE--ECST-THHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHH----HHcCCCEEE--cCCC-cHHHHHHHHhCCCC
Confidence 578999999998765 555566666663 36899999999998866 457886543 2322 22111 11237
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
||+||- |+|.. ..+..+++++ ++||++|..
T Consensus 240 ~d~v~d---~~G~~-------------------------~~~~~~~~~l----~~~G~iv~~ 269 (345)
T 3jv7_A 240 ATAVFD---FVGAQ-------------------------STIDTAQQVV----AVDGHISVV 269 (345)
T ss_dssp EEEEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred CeEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 999875 44431 2467778887 999999863
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.94 E-value=0.057 Score=54.33 Aligned_cols=99 Identities=20% Similarity=0.248 Sum_probs=62.6
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc----ccCCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----~~~~~ 248 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.|++.+ +++|.+.+ +..+...+.. .....
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~----~~lGa~~v--i~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIA----LEYGATDI--INYKNGDIVEQILKATDGK 234 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHH----HHHTCCEE--ECGGGSCHHHHHHHHTTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHH----HHhCCceE--EcCCCcCHHHHHHHHcCCC
Confidence 4678999999998654 444445555442 23799999999988765 45787643 3332222211 11224
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.||+||- |+|.. ..+..+++++ ++||++|..
T Consensus 235 g~D~v~d---~~g~~-------------------------~~~~~~~~~l----~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVI---AGGDV-------------------------HTFAQAVKMI----KPGSDIGNV 265 (352)
T ss_dssp CEEEEEE---CSSCT-------------------------THHHHHHHHE----EEEEEEEEC
T ss_pred CCCEEEE---CCCCh-------------------------HHHHHHHHHH----hcCCEEEEe
Confidence 7999974 44432 1367778887 999998753
No 322
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.89 E-value=0.054 Score=55.19 Aligned_cols=96 Identities=11% Similarity=0.068 Sum_probs=61.2
Q ss_pred CCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEE
Q 010971 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 175 ~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
.+++|++||-.+||+ |..++++|..++ ..|+++|.++.+++.++ .+|...+ +..+...+..... ..||+|
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~-~g~Dvv 261 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAK----ALGADEV--VNSRNADEMAAHL-KSFDFI 261 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHH----HHTCSEE--EETTCHHHHHTTT-TCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcEE--eccccHHHHHHhh-cCCCEE
Confidence 678999999998764 445556666553 46999999999988764 4787643 2222111111111 579999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|- |+|... .+..+++++ ++||++|..
T Consensus 262 id---~~g~~~-------------------------~~~~~~~~l----~~~G~iv~~ 287 (369)
T 1uuf_A 262 LN---TVAAPH-------------------------NLDDFTTLL----KRDGTMTLV 287 (369)
T ss_dssp EE---CCSSCC-------------------------CHHHHHTTE----EEEEEEEEC
T ss_pred EE---CCCCHH-------------------------HHHHHHHHh----ccCCEEEEe
Confidence 75 444320 155667776 999998753
No 323
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.89 E-value=0.044 Score=55.77 Aligned_cols=99 Identities=18% Similarity=0.221 Sum_probs=63.7
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecC--CCCCccc---cCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD--GNELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D--~~~~~~~---~~~ 247 (496)
..+++|++||=++||+ |..++++|..++ ...|+++|.++.|++.+ +++|.+.+ +... ...+... ...
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a----~~lGa~~v--i~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETA----KKFGVNEF--VNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHH----HTTTCCEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHH----HHcCCcEE--EccccCchhHHHHHHHhcC
Confidence 4578999999998754 445555666553 24799999999998855 46888653 2222 1222111 112
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG-G~LVYS 311 (496)
+.||+||- |+|.. ..+..+++++ ++| |++|..
T Consensus 262 gg~D~vid---~~g~~-------------------------~~~~~~~~~l----~~g~G~iv~~ 294 (378)
T 3uko_A 262 GGVDYSFE---CIGNV-------------------------SVMRAALECC----HKGWGTSVIV 294 (378)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEEC
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHh----hccCCEEEEE
Confidence 47999985 55431 2467788886 996 998764
No 324
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.88 E-value=0.057 Score=54.77 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=62.7
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC--CCCccc---cCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~--~~~~~~---~~~ 247 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.|++.+ +++|.+.+ +..+. ..+... ...
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a----~~lGa~~v--i~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKA----IELGATEC--LNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHH----HHTTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHH----HHcCCcEE--EecccccchHHHHHHHHhC
Confidence 3578999999998654 444455565553 23799999999998765 45788643 22221 122111 112
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG-G~LVYS 311 (496)
+.||+||- |+|.. ..+..+++++ ++| |++|..
T Consensus 260 gg~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVE---CAGRI-------------------------ETMMNALQST----YCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEEC
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCCEEEEE
Confidence 47999985 44431 2367778886 999 998763
No 325
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.84 E-value=0.038 Score=56.03 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=64.0
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---cCCCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLNT 249 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~~~~~ 249 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.|++.++ .+|.+.+ ++.+...+... ...+.
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~v--i~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATHV--INSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTSC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCEE--ecCCccCHHHHHHHhcCCC
Confidence 3578999999998765 555566666653 237999999999988764 5687543 33322222111 11237
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
||+||- |+|. ...+..+++++ ++||++|..
T Consensus 259 ~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~G~iv~~ 288 (371)
T 1f8f_A 259 VNFALE---STGS-------------------------PEILKQGVDAL----GILGKIAVV 288 (371)
T ss_dssp EEEEEE---CSCC-------------------------HHHHHHHHHTE----EEEEEEEEC
T ss_pred CcEEEE---CCCC-------------------------HHHHHHHHHHH----hcCCEEEEe
Confidence 999975 3432 12367778887 999998764
No 326
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.73 E-value=0.1 Score=52.76 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=63.3
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc----ccCCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----~~~~~ 248 (496)
..+++|++||-.++|+ |..++++|..++ ..|+++|.++.+++.+ +.+|.+.+. ..+...+.. .....
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~----~~lGa~~vi--~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRA----FALGADHGI--NRLEEDWVERVYALTGDR 256 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHH----HHHTCSEEE--ETTTSCHHHHHHHHHTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHH----HHcCCCEEE--cCCcccHHHHHHHHhCCC
Confidence 3578999999998665 444555666553 4899999999998875 457886543 233222211 11234
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.||+||- |+|.. .+..+++++ ++||++|...
T Consensus 257 g~D~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILE---IAGGA--------------------------GLGQSLKAV----APDGRISVIG 287 (363)
T ss_dssp CEEEEEE---ETTSS--------------------------CHHHHHHHE----EEEEEEEEEC
T ss_pred CceEEEE---CCChH--------------------------HHHHHHHHh----hcCCEEEEEe
Confidence 7999875 44421 156677776 9999988653
No 327
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.71 E-value=0.023 Score=56.23 Aligned_cols=103 Identities=14% Similarity=0.072 Sum_probs=56.0
Q ss_pred CeEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEE
Q 010971 229 TNTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYI 308 (496)
Q Consensus 229 ~nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~L 308 (496)
..+.++++|...+...++.++||+|++|||+.........+.... ..............++..+.++| +|||.|
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~--~~~~~~~~l~~l~~~~~~~~rvL----k~~G~l 93 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLG--HIEDYEAFLDELDRVWREVFRLL----VPGGRL 93 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCH--HHHHHHHHHHHHHHHHHHHHHHE----EEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhc--ccccHHHHHHHHHHHHHHHHHHc----CCCcEE
Confidence 357788999877543344578999999999965432222211100 01111222233456777777776 999999
Q ss_pred EEEeCCCCCcC----------CHHHHHHHHHhCCcEEee
Q 010971 309 VYSTCSIMVTE----------NEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 309 VYSTCSi~~eE----------NE~vV~~~L~~~~~~lv~ 337 (496)
++........- .-..+..+++..++.+..
T Consensus 94 ~i~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 94 VIVVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEEECCEEEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 87654221000 012344556667776654
No 328
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.64 E-value=0.073 Score=53.98 Aligned_cols=99 Identities=12% Similarity=0.131 Sum_probs=61.9
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC--CCCccc---cCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~--~~~~~~---~~~ 247 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.+++.+ +++|.+.+ +..+. ..+... ...
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~----~~lGa~~v--i~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKA----KEVGATEC--VNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHH----HHTTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHH----HHhCCceE--ecccccchhHHHHHHHHhC
Confidence 3578999999998654 444445555543 23799999999998765 45787643 22221 112111 112
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG-G~LVYS 311 (496)
+.||+||- |+|.. ..+..+++++ ++| |++|..
T Consensus 260 ~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 292 (374)
T 2jhf_A 260 GGVDFSFE---VIGRL-------------------------DTMVTALSCC----QEAYGVSVIV 292 (374)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHHB----CTTTCEEEEC
T ss_pred CCCcEEEE---CCCCH-------------------------HHHHHHHHHh----hcCCcEEEEe
Confidence 47999975 44431 2366777876 999 998764
No 329
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.63 E-value=0.054 Score=54.97 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=59.5
Q ss_pred CCCeEeecc-CCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---cCCCCcCE
Q 010971 178 EKERVIDMA-AAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLNTVDR 252 (496)
Q Consensus 178 ~g~~VLDmc-Agp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~~~~~fD~ 252 (496)
+|++||=.+ +|+ |..++++|..+. ...|+++|.++.+++.++ .+|.+.+. +... .+... .....||+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~vi--~~~~-~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHHVI--DHSK-PLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSEEE--CTTS-CHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCEEE--eCCC-CHHHHHHHhcCCCceE
Confidence 799998776 332 445555665543 368999999999988764 48876542 2221 22111 12357998
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
||- |+|.+ ..+..+++++ ++||++|..
T Consensus 243 vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFS---TTHTD-------------------------KHAAEIADLI----APQGRFCLI 269 (363)
T ss_dssp EEE---CSCHH-------------------------HHHHHHHHHS----CTTCEEEEC
T ss_pred EEE---CCCch-------------------------hhHHHHHHHh----cCCCEEEEE
Confidence 875 54431 2467777876 999999864
No 330
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.62 E-value=0.061 Score=54.60 Aligned_cols=100 Identities=19% Similarity=0.206 Sum_probs=62.5
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC--CCCcccc---CC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKVL---GL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~--~~~~~~~---~~ 247 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.+++.+ +.+|.+.+ +..+. ..+.... ..
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a----~~lGa~~v--i~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKA----KALGATDC--LNPRELDKPVQDVITELTA 263 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHH----HHTTCSEE--ECGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHH----HHhCCcEE--EccccccchHHHHHHHHhC
Confidence 3578999999998654 344445555543 23799999999998765 45787643 22221 1121111 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEEe
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYST 312 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG-G~LVYST 312 (496)
+.||+||- |+|.. ..+..+++++ ++| |++|...
T Consensus 264 ~g~Dvvid---~~G~~-------------------------~~~~~~~~~l----~~~~G~iv~~G 297 (376)
T 1e3i_A 264 GGVDYSLD---CAGTA-------------------------QTLKAAVDCT----VLGWGSCTVVG 297 (376)
T ss_dssp SCBSEEEE---SSCCH-------------------------HHHHHHHHTB----CTTTCEEEECC
T ss_pred CCccEEEE---CCCCH-------------------------HHHHHHHHHh----hcCCCEEEEEC
Confidence 37999975 44431 2367778886 999 9998643
No 331
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.61 E-value=0.07 Score=54.01 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=61.9
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC--CCCccc---cCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---LGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~--~~~~~~---~~~ 247 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.+++.++ .+|...+ +.... ..+... ...
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATEC--INPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSEE--ECGGGCSSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCceE--eccccccccHHHHHHHHhC
Confidence 3578999999998654 344445555553 237999999999988664 5787653 22211 112111 112
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG-G~LVYS 311 (496)
+.||+||- |+|.. ..+..+++++ ++| |++|..
T Consensus 259 ~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 291 (373)
T 2fzw_A 259 GGVDYSFE---CIGNV-------------------------KVMRAALEAC----HKGWGVSVVV 291 (373)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEEC
T ss_pred CCCCEEEE---CCCcH-------------------------HHHHHHHHhh----ccCCcEEEEE
Confidence 47999975 44431 2366778876 999 998763
No 332
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.51 E-value=0.24 Score=49.33 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=63.1
Q ss_pred cCCCCCCeEeeccCCCchH-HHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc----cCCC
Q 010971 174 LAPQEKERVIDMAAAPGGK-TTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV----LGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgK-T~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~----~~~~ 248 (496)
..+++|++||=.+||+.|. ++++|..++ ...++++|.++.|++.+ +++|...+ ++..-...... ....
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a----~~lGa~~~--i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALA----KSFGAMQT--FNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHH----HHTTCSEE--EETTTSCHHHHHHHHGGGC
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHH----HHcCCeEE--EeCCCCCHHHHHHhhcccC
Confidence 3578999999998876443 344555543 35789999999998765 56887653 33332222111 1225
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+|.|+- |+|.+ ..+..+++++ ++||+++..
T Consensus 229 g~d~v~d---~~G~~-------------------------~~~~~~~~~l----~~~G~~v~~ 259 (346)
T 4a2c_A 229 FNQLILE---TAGVP-------------------------QTVELAVEIA----GPHAQLALV 259 (346)
T ss_dssp SSEEEEE---CSCSH-------------------------HHHHHHHHHC----CTTCEEEEC
T ss_pred Ccccccc---ccccc-------------------------chhhhhhhee----cCCeEEEEE
Confidence 6888775 44432 2366777876 999998763
No 333
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=94.48 E-value=0.059 Score=60.43 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=36.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC----cEEEEEeCCHHHHHHHHHHH
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT----GLIYANEMKASRLKSLTANL 223 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~----g~V~A~D~s~~rl~~l~~nl 223 (496)
...+|||++||.||.++-+.+..... -.++|+|+++..++..+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 34689999999999998877652110 26899999999999998884
No 334
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=94.47 E-value=0.034 Score=57.99 Aligned_cols=46 Identities=13% Similarity=0.077 Sum_probs=36.6
Q ss_pred CeEeeccCCCchHHHHHHHHcCCCcE----EEEEeCCHHHHHHHHHHHHH
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKNTGL----IYANEMKASRLKSLTANLHR 225 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~~g~----V~A~D~s~~rl~~l~~nl~r 225 (496)
-+|||+|||.||.+..+-++-.+-.. |.|+|+++..+.....|...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 58999999999999887665211123 89999999999999988753
No 335
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.41 E-value=0.074 Score=53.94 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=62.0
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC--CCCcccc---CC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKVL---GL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~--~~~~~~~---~~ 247 (496)
..+++|++||-.+||+ |..++++|..++ ...|+++|.++.+++.+ +++|.+.+ +..+. ..+.... ..
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~----~~lGa~~v--i~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKA----KVFGATDF--VNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHH----HHTTCCEE--ECGGGCSSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHH----HHhCCceE--EeccccchhHHHHHHHHhC
Confidence 3578999999998654 344455555543 23799999999998865 45787643 22221 1221111 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCC-cEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSG-GYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpG-G~LVYS 311 (496)
+.||+||- |+|.+ ..+..+++++ ++| |++|..
T Consensus 261 ~g~D~vid---~~g~~-------------------------~~~~~~~~~l----~~~~G~iv~~ 293 (374)
T 1cdo_A 261 GGVDFSLE---CVGNV-------------------------GVMRNALESC----LKGWGVSVLV 293 (374)
T ss_dssp SCBSEEEE---CSCCH-------------------------HHHHHHHHTB----CTTTCEEEEC
T ss_pred CCCCEEEE---CCCCH-------------------------HHHHHHHHHh----hcCCcEEEEE
Confidence 47999985 44431 2367778886 999 998864
No 336
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.41 E-value=0.21 Score=50.29 Aligned_cols=101 Identities=22% Similarity=0.189 Sum_probs=61.8
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC---CCc----ccc
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN---ELP----KVL 245 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~---~~~----~~~ 245 (496)
..+++|++||=.+||+ |..++++|..++ ...|++.|.++.+++.+++. ...+.....|.. .+. ...
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l-----~~~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI-----CPEVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH-----CTTCEEEECCSCCHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh-----chhcccccccccchHHHHHHHHHHh
Confidence 4678999999988754 444455555543 23599999999999887653 222222222211 111 111
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
....||+||- |+|.. ..+..+++++ ++||++|...
T Consensus 249 ~g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~G 283 (363)
T 3m6i_A 249 GGIEPAVALE---CTGVE-------------------------SSIAAAIWAV----KFGGKVFVIG 283 (363)
T ss_dssp SSCCCSEEEE---CSCCH-------------------------HHHHHHHHHS----CTTCEEEECC
T ss_pred CCCCCCEEEE---CCCCh-------------------------HHHHHHHHHh----cCCCEEEEEc
Confidence 2357999985 44431 1366777876 9999998643
No 337
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.36 E-value=0.11 Score=60.11 Aligned_cols=83 Identities=22% Similarity=0.253 Sum_probs=56.8
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCC-------------cccc
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-------------PKVL 245 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~-------------~~~~ 245 (496)
.-++||+|||.||.++-+.+. +-.-.|+|+|+++..++..+.|.. +..++..|...+ ...+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNNP-----GSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC-----CCccccccHHHHhhhccchhhhhhhhhhc
Confidence 458999999999999887664 111268899999999999888752 333444443211 0011
Q ss_pred -CCCCcCEEEECCCCCCCCcccC
Q 010971 246 -GLNTVDRVLLDAPCSGTGVISK 267 (496)
Q Consensus 246 -~~~~fD~VLlDaPCSg~G~i~r 267 (496)
..+.+|+|+.-|||-+.....+
T Consensus 614 p~~~~vDll~GGpPCQ~FS~ag~ 636 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFSGMNR 636 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCCSSSC
T ss_pred ccCCCeeEEEEcCCCcchhhhCC
Confidence 1257999999999988765543
No 338
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.02 E-value=0.26 Score=47.34 Aligned_cols=84 Identities=14% Similarity=0.123 Sum_probs=60.8
Q ss_pred CCCeEeeccCCCc-hHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPG-GKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpG-gKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.++|=.||+.+ |.+..+|..+- ....|+.+|.+...++.+.+.++..+-.++.++..|..+..... ..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4778888887653 67777776543 33589999999999999999998888767778888987642211 12
Q ss_pred CCcCEEEECCCCCC
Q 010971 248 NTVDRVLLDAPCSG 261 (496)
Q Consensus 248 ~~fD~VLlDaPCSg 261 (496)
+..|.++.++-..+
T Consensus 85 G~iD~lvnnAg~~~ 98 (256)
T 4fs3_A 85 GNIDGVYHSIAFAN 98 (256)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEecccccc
Confidence 68999988775443
No 339
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.84 E-value=0.065 Score=54.12 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=46.8
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC-CCccccCCCCcC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLGLNTVD 251 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~-~~~~~~~~~~fD 251 (496)
+.+++|++||-.+||+ |..++++|..++ ..|+++|.++.+++.++ .+|...+ +..+.. .+..... +.||
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~----~lGa~~v--~~~~~~~~~~~~~~-~~~D 245 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAM----KMGADHY--IATLEEGDWGEKYF-DTFD 245 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHH----HHTCSEE--EEGGGTSCHHHHSC-SCEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH----HcCCCEE--EcCcCchHHHHHhh-cCCC
Confidence 3678999999999844 444455555553 37999999999887664 4787654 232212 2222222 4799
Q ss_pred EEEE
Q 010971 252 RVLL 255 (496)
Q Consensus 252 ~VLl 255 (496)
+||-
T Consensus 246 ~vid 249 (360)
T 1piw_A 246 LIVV 249 (360)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 340
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.80 E-value=0.63 Score=44.27 Aligned_cols=130 Identities=13% Similarity=0.054 Sum_probs=75.6
Q ss_pred CCCeEeeccCCCc-hHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPG-GKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpG-gKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.|++.| |.+.+++..+. ....|+.++.+....+.+.+.....+-.++.++..|..+..... ..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4667887777643 46777666543 33488899988777777777777776657888888988753221 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY----LQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~----lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+.+|.|+..|-....+.. +......+.++...... -...++..++.. ++++|.||+.+..
T Consensus 86 g~id~li~~Ag~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~g~iv~isS~ 149 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEEL---VGEYLNTNRDGFLLAHNISSYSLTAVVKAARPM----MTEGGSIVTLTYL 149 (266)
T ss_dssp SCCCEEEECCCCCCGGGG---SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG----CTTCEEEEEEECG
T ss_pred CCeeEEEEcccccccccc---ccchhhccHHHHHHHHHHhHHHHHHHHHHHHhh----cCCCceEEEEecc
Confidence 478999987643331100 01112234444333222 223344444444 4778998886543
No 341
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.76 E-value=0.11 Score=52.14 Aligned_cols=96 Identities=13% Similarity=0.017 Sum_probs=55.6
Q ss_pred eEEEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEE
Q 010971 230 NTIVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIV 309 (496)
Q Consensus 230 nv~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LV 309 (496)
...++++|+......++.++||.|++|||+...... .+ ..............+|..+.++| +|||.|+
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~------~y--~~~~~~~~~~~l~~~l~~~~rvL----k~~G~i~ 81 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKK------EY--GNLEQHEYVDWFLSFAKVVNKKL----KPDGSFV 81 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSC------SS--CSCHHHHHHHHHHHHHHHHHHHE----EEEEEEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCccc------cc--CCcCHHHHHHHHHHHHHHHHHHC----cCCcEEE
Confidence 467888998764334455789999999998543110 01 11122333344456677777765 9999998
Q ss_pred EEeCCCCCcC-------CHHHHHHHHHhCCcEEee
Q 010971 310 YSTCSIMVTE-------NEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 310 YSTCSi~~eE-------NE~vV~~~L~~~~~~lv~ 337 (496)
........+. +-..+-.+++..++.+..
T Consensus 82 i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 82 VDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EEECCCEETTEEEECCHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCEecCCCcccccchHHHHHHHHHhCCCEEEE
Confidence 7655331111 122333445667777664
No 342
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.68 E-value=0.086 Score=51.71 Aligned_cols=129 Identities=15% Similarity=0.114 Sum_probs=79.3
Q ss_pred CeEeeccCCCchHHHHHHHHc------CCCcEEEEEe-----CCH----------------------HHHHHH---HHHH
Q 010971 180 ERVIDMAAAPGGKTTYIAALM------KNTGLIYANE-----MKA----------------------SRLKSL---TANL 223 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~------~~~g~V~A~D-----~s~----------------------~rl~~l---~~nl 223 (496)
..|+++|..-|+.+..++++. .....|+++| ... ..+..+ .+|.
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 489999999999999887652 2347899999 221 112222 2233
Q ss_pred HHcCC--CeEEEEecCCCCC-ccc---cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHh
Q 010971 224 HRMGV--TNTIVCNYDGNEL-PKV---LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDM 297 (496)
Q Consensus 224 ~r~g~--~nv~v~~~D~~~~-~~~---~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~ 297 (496)
.++|. .+|.++.+++.+. +.. .+...||.|.+|+-. -.-.+..|..++..
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~------------------------Y~~t~~~le~~~p~ 206 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL------------------------YEPTKAVLEAIRPY 206 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC------------------------HHHHHHHHHHHGGG
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc------------------------cchHHHHHHHHHHH
Confidence 45775 5799999998653 332 123479999999840 00112334555555
Q ss_pred hhhcCCCCcEEEEEeCCC--CCcCCHHHHHHHHHhCCcEEee
Q 010971 298 VDANSKSGGYIVYSTCSI--MVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 298 l~~~lkpGG~LVYSTCSi--~~eENE~vV~~~L~~~~~~lv~ 337 (496)
| +|||+||+-.... .+.+.+ -++.|+..+++++..
T Consensus 207 l----~~GGvIv~DD~~~~~w~G~~~-A~~ef~~~~~~~i~~ 243 (257)
T 3tos_A 207 L----TKGSIVAFDELDNPKWPGENI-AMRKVLGLDHAPLRL 243 (257)
T ss_dssp E----EEEEEEEESSTTCTTCTHHHH-HHHHHTCTTSSCCEE
T ss_pred h----CCCcEEEEcCCCCCCChHHHH-HHHHHHhhCCCeEEE
Confidence 4 9999999988642 333333 346666666554443
No 343
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.63 E-value=0.46 Score=48.70 Aligned_cols=74 Identities=11% Similarity=0.077 Sum_probs=46.5
Q ss_pred CCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc----ccCCCC
Q 010971 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----~~~~~~ 249 (496)
.+++|++||=.+||+ |..++++|..++ ...|+++|.++.|++.+ +++|.+.+ ++.+...+.. ......
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~----~~lGa~~v--i~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLA----KELGADHV--IDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHH----HHHTCSEE--ECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHH----HHcCCCEE--EcCCCCCHHHHHHHHhCCCC
Confidence 478999999988743 334445555542 34899999999998866 45787643 3333222211 112247
Q ss_pred cCEEEE
Q 010971 250 VDRVLL 255 (496)
Q Consensus 250 fD~VLl 255 (496)
||+||-
T Consensus 283 ~D~vid 288 (404)
T 3ip1_A 283 AKLFLE 288 (404)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999985
No 344
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.58 E-value=0.13 Score=52.37 Aligned_cols=99 Identities=19% Similarity=0.218 Sum_probs=61.0
Q ss_pred cC-CCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecC---CCCC----ccc
Q 010971 174 LA-PQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD---GNEL----PKV 244 (496)
Q Consensus 174 L~-~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D---~~~~----~~~ 244 (496)
+. +++|++||-.++|+ |..++++|..++ ...|++.|.++.+++.++ .+|.+.+ +..+ ...+ ...
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~v--i~~~~~~~~~~~~~v~~~ 262 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGADLT--LNRRETSVEERRKAIMDI 262 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTCSEE--EETTTSCHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCCcEE--EeccccCcchHHHHHHHH
Confidence 35 78999999999543 333444554442 138999999999988764 5787643 2322 1111 111
Q ss_pred cCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 245 LGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 245 ~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.....||+||- |+|.+ ..+..+++++ ++||++|..
T Consensus 263 ~~g~g~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 297 (380)
T 1vj0_A 263 THGRGADFILE---ATGDS-------------------------RALLEGSELL----RRGGFYSVA 297 (380)
T ss_dssp TTTSCEEEEEE---CSSCT-------------------------THHHHHHHHE----EEEEEEEEC
T ss_pred hCCCCCcEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 12236999975 44432 1366777876 999998753
No 345
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.33 E-value=0.13 Score=46.98 Aligned_cols=98 Identities=20% Similarity=0.243 Sum_probs=57.4
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc----cccCCC
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~----~~~~~~ 248 (496)
+.+++|++||..||+ |+.+..+++++.. ...|+++|.++.+++.++ .+|...+ +..+-..+. ......
T Consensus 34 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~~--~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 34 GRLSPGERVLIHSAT-GGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEYV--GDSRSVDFADEILELTDGY 106 (198)
T ss_dssp SCCCTTCEEEETTTT-SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSEE--EETTCSTHHHHHHHHTTTC
T ss_pred hCCCCCCEEEEeeCC-ChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCEE--eeCCcHHHHHHHHHHhCCC
Confidence 467899999998853 4444444443321 248999999998876653 4676432 222211111 111124
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+|.|+. |.|. ..+..+++++ ++||++|..
T Consensus 107 ~~D~vi~---~~g~--------------------------~~~~~~~~~l----~~~G~~v~~ 136 (198)
T 1pqw_A 107 GVDVVLN---SLAG--------------------------EAIQRGVQIL----APGGRFIEL 136 (198)
T ss_dssp CEEEEEE---CCCT--------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred CCeEEEE---CCch--------------------------HHHHHHHHHh----ccCCEEEEE
Confidence 6999985 3331 0255667776 999998864
No 346
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=93.32 E-value=0.074 Score=54.64 Aligned_cols=77 Identities=10% Similarity=0.134 Sum_probs=49.3
Q ss_pred CCeEeeccCCCchHHHHHHHH---------------cCCCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCC-
Q 010971 179 KERVIDMAAAPGGKTTYIAAL---------------MKNTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNEL- 241 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l---------------~~~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~- 241 (496)
.-+|+|+||++|..|+.+.+. -.+.-.|+.+|+-..-...+-..+..+.- .+..++.+.+..|
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 468999999999999764443 12345789999887777777666643211 0223444443332
Q ss_pred ccccCCCCcCEEEE
Q 010971 242 PKVLGLNTVDRVLL 255 (496)
Q Consensus 242 ~~~~~~~~fD~VLl 255 (496)
...++.++||.|+.
T Consensus 132 ~rlfp~~S~d~v~S 145 (359)
T 1m6e_X 132 GRLFPRNTLHFIHS 145 (359)
T ss_dssp SCCSCTTCBSCEEE
T ss_pred hccCCCCceEEEEe
Confidence 44455689999975
No 347
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.06 E-value=0.087 Score=52.89 Aligned_cols=92 Identities=22% Similarity=0.199 Sum_probs=56.5
Q ss_pred CCCeEeecc-CC-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---cCCCCcCE
Q 010971 178 EKERVIDMA-AA-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLNTVDR 252 (496)
Q Consensus 178 ~g~~VLDmc-Ag-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~~~~~fD~ 252 (496)
+|++||=.+ +| .|..++++|..++ ..|+++|.++.+++.+++ +|.+.+ +..+. .+... .....||+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~v--i~~~~-~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK----MGADIV--LNHKE-SLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHH----HTCSEE--ECTTS-CHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcEE--EECCc-cHHHHHHHhCCCCccE
Confidence 899999763 22 2444445555443 489999999999887654 687643 22221 22111 12357998
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEE
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVY 310 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVY 310 (496)
||- |+|.. ..+..+++++ ++||++|.
T Consensus 221 v~d---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~ 246 (346)
T 3fbg_A 221 VFC---TFNTD-------------------------MYYDDMIQLV----KPRGHIAT 246 (346)
T ss_dssp EEE---SSCHH-------------------------HHHHHHHHHE----EEEEEEEE
T ss_pred EEE---CCCch-------------------------HHHHHHHHHh----ccCCEEEE
Confidence 875 44421 2356777876 99999974
No 348
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.02 E-value=0.23 Score=49.39 Aligned_cols=98 Identities=17% Similarity=0.131 Sum_probs=62.5
Q ss_pred CCCCCCeEeeccCCCchH-HHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc----cccCCCC
Q 010971 175 APQEKERVIDMAAAPGGK-TTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgK-T~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~----~~~~~~~ 249 (496)
.+++|++||=.+||++|- ++.++..+. ...|+++|.++.|++. ++.+|...+. ++...++. .......
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~----~~~~Ga~~~i--~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNL----AKKIGADVTI--NSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHH----HHHTTCSEEE--EC-CCCHHHHHHHHTTSSC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhh----hhhcCCeEEE--eCCCCCHHHHhhhhcCCCC
Confidence 578999999999987654 334444443 3689999999998764 4567876532 22222221 1122346
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
+|.++.++ +.+ ..+..++.++ ++||+++..
T Consensus 233 ~d~~~~~~---~~~-------------------------~~~~~~~~~l----~~~G~~v~~ 262 (348)
T 4eez_A 233 VQSAIVCA---VAR-------------------------IAFEQAVASL----KPMGKMVAV 262 (348)
T ss_dssp EEEEEECC---SCH-------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred ceEEEEec---cCc-------------------------chhheeheee----cCCceEEEE
Confidence 88888743 221 2366777876 999998764
No 349
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.98 E-value=0.1 Score=52.32 Aligned_cols=99 Identities=12% Similarity=-0.001 Sum_probs=61.5
Q ss_pred CCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC-CCC-ccccCCCCcC
Q 010971 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NEL-PKVLGLNTVD 251 (496)
Q Consensus 175 ~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~-~~~-~~~~~~~~fD 251 (496)
.+ +|++||-.+||+ |..++++|..+.+...|+++|.++.+++.++ .+|.+.+. ..+. ..+ ........||
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~vi--~~~~~~~~~~~~~~g~g~D 240 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL----ELGADYVS--EMKDAESLINKLTDGLGAS 240 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH----HHTCSEEE--CHHHHHHHHHHHHTTCCEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH----HhCCCEEe--ccccchHHHHHhhcCCCcc
Confidence 67 999999999854 4445566665510147999999999987664 47876532 2111 111 1111123799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+||- |+|.. ..+..+++++ ++||++|...
T Consensus 241 ~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~g 269 (344)
T 2h6e_A 241 IAID---LVGTE-------------------------ETTYNLGKLL----AQEGAIILVG 269 (344)
T ss_dssp EEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred EEEE---CCCCh-------------------------HHHHHHHHHh----hcCCEEEEeC
Confidence 9985 44321 2366777876 9999988643
No 350
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=92.97 E-value=0.26 Score=58.52 Aligned_cols=83 Identities=23% Similarity=0.263 Sum_probs=56.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCC-------------cc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-------------PK 243 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~-------------~~ 243 (496)
...+|||+|||.||.++-+.+. +- -.|+|+|+++..++..+.|.. +..+...|...+ ..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~gdi~~~~~~ 922 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNNP-----GTTVFTEDCNVLLKLVMAGEVTNSLGQ 922 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHTTTCSBCSSCC
T ss_pred CCceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhCC-----CCcEeeccHHHHhHhhhccchhhhhhh
Confidence 3568999999999999877653 21 258899999999999888842 223334432211 01
Q ss_pred cc-CCCCcCEEEECCCCCCCCcccC
Q 010971 244 VL-GLNTVDRVLLDAPCSGTGVISK 267 (496)
Q Consensus 244 ~~-~~~~fD~VLlDaPCSg~G~i~r 267 (496)
.+ ..+.+|+|+--|||-+.....+
T Consensus 923 ~lp~~~~vDvl~GGpPCQ~FS~agr 947 (1330)
T 3av4_A 923 RLPQKGDVEMLCGGPPCQGFSGMNR 947 (1330)
T ss_dssp BCCCTTTCSEEEECCCCTTTCSSSC
T ss_pred hccccCccceEEecCCCcccccccc
Confidence 11 1246999999999988765543
No 351
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.88 E-value=0.35 Score=48.29 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=61.0
Q ss_pred CCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccC--CCCcC
Q 010971 175 APQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG--LNTVD 251 (496)
Q Consensus 175 ~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~--~~~fD 251 (496)
.+++|++||-.+||+ |..+++++..++ ..|+++|.++.+++.++ .+|...+ +......+..... ...||
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~~--~d~~~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAK----ELGADLV--VNPLKEDAAKFMKEKVGGVH 232 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHH----HTTCSEE--ECTTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----HCCCCEE--ecCCCccHHHHHHHHhCCCC
Confidence 678999999999854 444455555543 48999999999988664 4787543 2222112211110 04699
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
+|+- |+|.. ..+..+++++ ++||++|..
T Consensus 233 ~vid---~~g~~-------------------------~~~~~~~~~l----~~~G~~v~~ 260 (339)
T 1rjw_A 233 AAVV---TAVSK-------------------------PAFQSAYNSI----RRGGACVLV 260 (339)
T ss_dssp EEEE---SSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred EEEE---CCCCH-------------------------HHHHHHHHHh----hcCCEEEEe
Confidence 9875 44421 1356777776 999998753
No 352
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.74 E-value=0.084 Score=52.12 Aligned_cols=67 Identities=6% Similarity=-0.002 Sum_probs=45.5
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCE
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
..+++|++||=.+||+ |..++++|..++ ..|++++ ++.+++.++ ++|.+.+. + | ... . ...||+
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~----~lGa~~v~--~-d---~~~-v-~~g~Dv 202 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAA----KRGVRHLY--R-E---PSQ-V-TQKYFA 202 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHH----HHTEEEEE--S-S---GGG-C-CSCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHH----HcCCCEEE--c-C---HHH-h-CCCccE
Confidence 3578999999998853 455556666653 3899999 888887764 47875443 3 4 222 2 468998
Q ss_pred EEE
Q 010971 253 VLL 255 (496)
Q Consensus 253 VLl 255 (496)
||-
T Consensus 203 v~d 205 (315)
T 3goh_A 203 IFD 205 (315)
T ss_dssp EEC
T ss_pred EEE
Confidence 863
No 353
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.72 E-value=1.7 Score=42.39 Aligned_cols=145 Identities=12% Similarity=0.048 Sum_probs=74.7
Q ss_pred cEEEeCCcchhHHHhcCCCCCCeEeeccCCCc-hHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEec
Q 010971 159 FYMLQSASSFLPVMALAPQEKERVIDMAAAPG-GKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY 236 (496)
Q Consensus 159 ~~~iQd~sS~l~v~~L~~~~g~~VLDmcAgpG-gKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~ 236 (496)
....|.+.++-..+ ....|.+||=.|++.| |.+.+++..+- ....|+.++.+....+.+.+.....+ ++.++..
T Consensus 13 ~~~~~gp~~~~~~~--~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~ 88 (293)
T 3grk_A 13 EAQTQGPGSMTAQS--GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHC 88 (293)
T ss_dssp ----------------CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred CccccCCCCCCccc--ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEEC
Confidence 44556666654332 2235788888887754 57777776543 33478999999766666666666555 4677888
Q ss_pred CCCCCcccc--------CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCC
Q 010971 237 DGNELPKVL--------GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKS 304 (496)
Q Consensus 237 D~~~~~~~~--------~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkp 304 (496)
|..+..... ..+..|.++..|--+..+.+ ..+ ....+.++..... .-...++..++..+ +.
T Consensus 89 Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~-~~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m----~~ 161 (293)
T 3grk_A 89 DVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDEL-TGR--YIDTSEANFTNTMLISVYSLTAVSRRAEKLM----AD 161 (293)
T ss_dssp CTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHH-TSC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHT----TT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccc-ccc--ccccCHHHHHHHHHHHHHHHHHHHHHHHHhc----cC
Confidence 987642211 12579999986632210000 011 1223444433222 22334555566554 67
Q ss_pred CcEEEEEeCC
Q 010971 305 GGYIVYSTCS 314 (496)
Q Consensus 305 GG~LVYSTCS 314 (496)
+|.||+.+..
T Consensus 162 ~g~Iv~isS~ 171 (293)
T 3grk_A 162 GGSILTLTYY 171 (293)
T ss_dssp CEEEEEEECG
T ss_pred CCEEEEEeeh
Confidence 8998886543
No 354
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.65 E-value=0.45 Score=46.54 Aligned_cols=140 Identities=15% Similarity=0.098 Sum_probs=76.5
Q ss_pred EeCCcchhHHHhcCCCCCCeEeeccCCC-chHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Q 010971 162 LQSASSFLPVMALAPQEKERVIDMAAAP-GGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN 239 (496)
Q Consensus 162 iQd~sS~l~v~~L~~~~g~~VLDmcAgp-GgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~ 239 (496)
.|.++||...+.| .|.+||=.|++. +|.+.+++..+- ....|+.+|.+....+.+.......|. +.++..|..
T Consensus 16 ~~gp~sm~~~~~l---~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~ 90 (296)
T 3k31_A 16 TQGPGSMRTGMLM---EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV--KLTVPCDVS 90 (296)
T ss_dssp -----CCCCCCTT---TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC--CEEEECCTT
T ss_pred ccCCccccchhcc---CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC--eEEEEcCCC
Confidence 4566665443322 477888888764 477777776553 335899999998766766666666653 467778887
Q ss_pred CCcccc--------CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcE
Q 010971 240 ELPKVL--------GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY----LQKQLILAAIDMVDANSKSGGY 307 (496)
Q Consensus 240 ~~~~~~--------~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~----lQ~~LL~~A~~~l~~~lkpGG~ 307 (496)
+..... ..+.+|.++..|-......+ ..-....+.++...... -...++..++.. ++.+|.
T Consensus 91 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~g~ 163 (296)
T 3k31_A 91 DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNEL---KGRYVDTSLGNFLTSMHISCYSFTYIASKAEPL----MTNGGS 163 (296)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHH---TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG----CTTCEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccc---cCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH----hhcCCE
Confidence 642211 11578999986643221000 00112234444433222 223344445444 367899
Q ss_pred EEEEeC
Q 010971 308 IVYSTC 313 (496)
Q Consensus 308 LVYSTC 313 (496)
||+.+.
T Consensus 164 IV~isS 169 (296)
T 3k31_A 164 ILTLSY 169 (296)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 988654
No 355
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=92.21 E-value=0.84 Score=42.93 Aligned_cols=80 Identities=13% Similarity=0.135 Sum_probs=55.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~--~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~ 247 (496)
.+.+|| +.-|+|+.+.+++..+-. ...|++++.+..++..+.+.+...+. ++.++..|..+.... + ..
T Consensus 3 ~~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 355677 445678899888876533 35899999999998888888877653 466778888764221 1 01
Q ss_pred CCcCEEEECCCC
Q 010971 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~fD~VLlDaPC 259 (496)
+.+|.|+..|-.
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 378999986643
No 356
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=92.20 E-value=1 Score=44.04 Aligned_cols=126 Identities=14% Similarity=0.157 Sum_probs=75.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.|| +||.+.+++..+-. ...|+.++.+..++..+.+.+...|. ++.++..|..+..... ..+
T Consensus 30 ~gk~vlVTGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGG-ASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 5777886655 47788887775533 34899999999999999888887764 4677788887743211 014
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.+|.|+..|--...|.+ ...+.++..... .-...++..++..+.. -+.+|.||+.+.
T Consensus 108 ~id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~~~~g~iv~isS 168 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPL-------AQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLE-QGTGGHIAFTAS 168 (301)
T ss_dssp SCSEEEECCCCCCCBCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HCSCEEEEEECC
T ss_pred CCCEEEECCCcCCCCCc-------ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCCcEEEEeCc
Confidence 79999987643332222 123334333222 2223345555444311 033688887654
No 357
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.99 E-value=0.45 Score=47.42 Aligned_cols=74 Identities=12% Similarity=0.079 Sum_probs=48.7
Q ss_pred cCCCCCCeEeeccCC--CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc----ccCC
Q 010971 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcAg--pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----~~~~ 247 (496)
+.+++|++||-.+|| -|..+++++..++ ..|+++|.++.+++.+++ +|...+ ++.....+.. ....
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga~~~--~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGAAYV--IDTSTAPLYETVMELTNG 211 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSEE--EETTTSCHHHHHHHHTTT
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCCcEE--EeCCcccHHHHHHHHhCC
Confidence 467899999999876 4566666666653 489999999998877654 677643 2332222211 1122
Q ss_pred CCcCEEEE
Q 010971 248 NTVDRVLL 255 (496)
Q Consensus 248 ~~fD~VLl 255 (496)
..||+|+-
T Consensus 212 ~g~Dvvid 219 (340)
T 3gms_A 212 IGADAAID 219 (340)
T ss_dssp SCEEEEEE
T ss_pred CCCcEEEE
Confidence 47999876
No 358
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.92 E-value=0.59 Score=46.58 Aligned_cols=96 Identities=24% Similarity=0.349 Sum_probs=61.1
Q ss_pred CCCCCCeEeeccC--CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc----ccCCC
Q 010971 175 APQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDmcA--gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----~~~~~ 248 (496)
.+++|++||-.+| |.|..+++++..++ ..|+++|.++.+++.++ .+|...+ +..+...+.. .....
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~----~~ga~~~--~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAK----ALGADET--VNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCSEE--EETTSTTHHHHHHHHTTTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCEE--EcCCcccHHHHHHHHhCCC
Confidence 5788999999998 34555556665543 48999999999988764 4676543 2322222211 11124
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+|+|+- |+| +- .+..+++++ ++||++|..
T Consensus 235 ~~d~vi~---~~g-~~-------------------------~~~~~~~~l----~~~G~~v~~ 264 (343)
T 2eih_A 235 GADKVVD---HTG-AL-------------------------YFEGVIKAT----ANGGRIAIA 264 (343)
T ss_dssp CEEEEEE---SSC-SS-------------------------SHHHHHHHE----EEEEEEEES
T ss_pred CceEEEE---CCC-HH-------------------------HHHHHHHhh----ccCCEEEEE
Confidence 7999986 444 21 156667776 899998763
No 359
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.79 E-value=0.3 Score=49.05 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=59.0
Q ss_pred CCCCCCeEeeccC-C-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc---CCCC
Q 010971 175 APQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDmcA-g-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~---~~~~ 249 (496)
.+++|++||-.++ | .|..+++++..++ ..|++.|.++.+++.+++ +|...+ +..+...+.... ....
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~~--~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTGKCEACER----LGAKRG--INYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHHSSC
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCEE--EeCCchHHHHHHHHHhCCC
Confidence 5789999997742 2 2334444554442 489999999999887653 677543 333322221111 1257
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
||+|+- |+|.. .+..+++++ ++||++|...
T Consensus 236 ~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~g 265 (353)
T 4dup_A 236 VDIILD---MIGAA--------------------------YFERNIASL----AKDGCLSIIA 265 (353)
T ss_dssp EEEEEE---SCCGG--------------------------GHHHHHHTE----EEEEEEEECC
T ss_pred ceEEEE---CCCHH--------------------------HHHHHHHHh----ccCCEEEEEE
Confidence 998876 44421 245667776 9999987643
No 360
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=91.78 E-value=1.7 Score=41.84 Aligned_cols=78 Identities=12% Similarity=0.150 Sum_probs=56.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |+||.+.+++..+. ....|++++.+..++..+...+...|..++.++..|..+.... + ..+
T Consensus 27 ~~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 27 QGKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 366787555 56788888877553 3348999999999999888888777766788888898764211 1 014
Q ss_pred CcCEEEEC
Q 010971 249 TVDRVLLD 256 (496)
Q Consensus 249 ~fD~VLlD 256 (496)
.+|.|+..
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 79999986
No 361
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.73 E-value=1.6 Score=41.33 Aligned_cols=127 Identities=18% Similarity=0.164 Sum_probs=76.3
Q ss_pred CCCeEeeccCCCc-hHHHHHHHHc-CCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPG-GKTTYIAALM-KNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpG-gKT~~lA~l~-~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.|++ | |.+.+++..+ .....|+.+|.+..++..+...+...+-.++.++..|..+..... ..
T Consensus 21 ~~k~vlITGas-g~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAA-GTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCS-SSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 46677766663 3 5666666544 333589999999999999988887777667888999987743211 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
+.+|.|+..|-.+..+.+ ...+.+++.... .-...++..++..+.. .+.+|.||+.+.
T Consensus 100 g~id~li~~Ag~~~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~~sS 161 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPV-------VDMTDEEWDRVLNVTLTSVMRATRAALRYFRG-VDHGGVIVNNAS 161 (266)
T ss_dssp SCCCEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT-SSCCEEEEEECC
T ss_pred CCCcEEEECCCcCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCCeEEEEeCC
Confidence 478999987643332221 123444333222 2223455555554411 125688877543
No 362
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.70 E-value=0.38 Score=48.12 Aligned_cols=98 Identities=18% Similarity=0.119 Sum_probs=59.8
Q ss_pred cCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc----cCCC
Q 010971 174 LAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV----LGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~----~~~~ 248 (496)
+.+ +|++||-.+||+ |..++++|..++ ...|++.|.++.+++.++ .+|...+ +..+...+... ....
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~v~~~~~g~ 235 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAK----KVGADYV--INPFEEDVVKEVMDITDGN 235 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHH----HHTCSEE--ECTTTSCHHHHHHHHTTTS
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCEE--ECCCCcCHHHHHHHHcCCC
Confidence 356 899999999843 333344444442 237999999999887664 5677543 33332222111 1123
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.||+|+- |+|. ...+..+++++ ++||++|..
T Consensus 236 g~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~G~iv~~ 266 (348)
T 2d8a_A 236 GVDVFLE---FSGA-------------------------PKALEQGLQAV----TPAGRVSLL 266 (348)
T ss_dssp CEEEEEE---CSCC-------------------------HHHHHHHHHHE----EEEEEEEEC
T ss_pred CCCEEEE---CCCC-------------------------HHHHHHHHHHH----hcCCEEEEE
Confidence 6999975 3332 12356777776 999998764
No 363
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=91.53 E-value=1.2 Score=42.02 Aligned_cols=123 Identities=15% Similarity=0.116 Sum_probs=73.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeC-CHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~ 247 (496)
.|.+||=.| |+|+.+.+++..+... ..|++++. +...+..+...+...|. ++.++..|..+.... + ..
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 366777554 5788888888765433 48889998 88888888877777664 466778888764321 1 01
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
+.+|.|+..|-....+.+ ...+.++..... .-...++..++..+ +.||.||+.+.
T Consensus 98 ~~~d~vi~~Ag~~~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~iv~~sS 156 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDE-------LEVTQELFDKVFNLNTRGQFFVAQQGLKHC----RRGGRIILTSS 156 (274)
T ss_dssp SCEEEEECCCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHE----EEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH----hhCCEEEEEcC
Confidence 378999876543322211 123333332222 22334555556654 45688887643
No 364
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=91.50 E-value=0.56 Score=46.02 Aligned_cols=81 Identities=20% Similarity=0.201 Sum_probs=57.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+..++..+...+...+..++.++..|..+..... ..+
T Consensus 40 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTG-GTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 355666554 56788888877653 33489999999999988888887777567888889988742210 115
Q ss_pred CcCEEEECCCC
Q 010971 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~fD~VLlDaPC 259 (496)
.+|.++..|-.
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987643
No 365
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.44 E-value=0.23 Score=49.77 Aligned_cols=96 Identities=19% Similarity=0.129 Sum_probs=60.4
Q ss_pred cCCCCCCeEeeccC--CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc----ccCC
Q 010971 174 LAPQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcA--gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----~~~~ 247 (496)
..+++|++||-.+| |.|..+++++..++ ..|++++.++.+++.++ .+|...+ +..+ ..+.. ....
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~v--~~~~-~~~~~~v~~~~~~ 225 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVK----SVGADIV--LPLE-EGWAKAVREATGG 225 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHH----HHTCSEE--EESS-TTHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----hcCCcEE--ecCc-hhHHHHHHHHhCC
Confidence 35789999998876 23445555555553 48999999999887655 4677643 3333 33211 1122
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
..||+|+- |+|.. .+..+++++ ++||++|..
T Consensus 226 ~g~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 256 (342)
T 4eye_A 226 AGVDMVVD---PIGGP--------------------------AFDDAVRTL----ASEGRLLVV 256 (342)
T ss_dssp SCEEEEEE---SCC----------------------------CHHHHHHTE----EEEEEEEEC
T ss_pred CCceEEEE---CCchh--------------------------HHHHHHHhh----cCCCEEEEE
Confidence 37999975 44431 145677776 999998863
No 366
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.44 E-value=0.82 Score=50.06 Aligned_cols=131 Identities=16% Similarity=0.091 Sum_probs=79.3
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcC---------CC--cEEEEEeC---CHHHHHHHH-----------HHHHHc-----
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMK---------NT--GLIYANEM---KASRLKSLT-----------ANLHRM----- 226 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~---------~~--g~V~A~D~---s~~rl~~l~-----------~nl~r~----- 226 (496)
++.-+|||+|-|+|...+...+... .. -.++++|. ++.-+..+- +.+..+
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 144 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCS
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCC
Confidence 3446999999999998887766541 11 25899998 777665222 112222
Q ss_pred CC-----C----eEEEEecCCCCCccccC---CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHH
Q 010971 227 GV-----T----NTIVCNYDGNELPKVLG---LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAA 294 (496)
Q Consensus 227 g~-----~----nv~v~~~D~~~~~~~~~---~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A 294 (496)
|+ . .+.+..+|+...-..+. ...||.|++|+- .-+++|++ |+. +++...
T Consensus 145 ~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f-----~p~~np~~---w~~-----------~~~~~l 205 (676)
T 3ps9_A 145 GCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF-----APAKNPDM---WTQ-----------NLFNAM 205 (676)
T ss_dssp EEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCS-----CGGGCGGG---SCH-----------HHHHHH
T ss_pred CceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCC-----CCcCChhh---hhH-----------HHHHHH
Confidence 11 1 13345567654322121 257999999974 22577875 332 345555
Q ss_pred HHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCCcEEee
Q 010971 295 IDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 295 ~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~~~lv~ 337 (496)
.+++ +|||++...+|. ..|...|...++.+..
T Consensus 206 ~~~~----~~g~~~~t~~~~-------~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 206 ARLA----RPGGTLATFTSA-------GFVRRGLQDAGFTMQK 237 (676)
T ss_dssp HHHE----EEEEEEEESCCC-------HHHHHHHHHHTCEEEE
T ss_pred HHHh----CCCCEEEeccCc-------HHHHHHHHhCCeEEEe
Confidence 5555 999988654444 4677777776766554
No 367
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.39 E-value=0.14 Score=49.48 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=49.7
Q ss_pred EEEecCCCCCccccCCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 232 IVCNYDGNELPKVLGLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 232 ~v~~~D~~~~~~~~~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.++++|+..+...+..++||+|++|||+... . .+-+ .+. ...........+|..+.++| +|||.|+..
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~-~--~~~d---~~~--~~~~y~~~~~~~l~~~~~~L----k~~g~i~v~ 73 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLS-K--ADWD---SFD--SHNEFLAFTYRWIDKVLDKL----DKDGSLYIF 73 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSC-S--SGGG---CCS--SHHHHHHHHHHHHHHHHHHE----EEEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCC-c--cccc---ccC--CHHHHHHHHHHHHHHHHHHh----cCCeEEEEE
Confidence 4567887554333445789999999998432 1 0000 110 12222333455666666665 999999887
Q ss_pred eCCCCCcCCHHHHHHHHHhCCcEEee
Q 010971 312 TCSIMVTENEAVIDYALKKRDVKLVP 337 (496)
Q Consensus 312 TCSi~~eENE~vV~~~L~~~~~~lv~ 337 (496)
.|.. +. ..+..++...++.+..
T Consensus 74 ~~d~---~~-~~~~~~~~~~gf~~~~ 95 (260)
T 1g60_A 74 NTPF---NC-AFICQYLVSKGMIFQN 95 (260)
T ss_dssp ECHH---HH-HHHHHHHHHTTCEEEE
T ss_pred cCcH---HH-HHHHHHHHhhccceeE
Confidence 6543 11 2222344555666554
No 368
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=91.31 E-value=0.91 Score=44.94 Aligned_cols=80 Identities=9% Similarity=0.052 Sum_probs=57.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |+||.+.+++..+- ....|++.+.+..+++.+...+...+.. ++.++..|..+..... ..
T Consensus 7 ~~k~vlVTG-as~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTG-GANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEET-TTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcC-CchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 456777555 45788888887653 3348999999999999998888877653 5788888987643211 12
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+.+|.|+..|-
T Consensus 86 g~id~lv~nAg 96 (319)
T 3ioy_A 86 GPVSILCNNAG 96 (319)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998764
No 369
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.30 E-value=0.2 Score=50.47 Aligned_cols=96 Identities=10% Similarity=0.167 Sum_probs=60.7
Q ss_pred CCCCC------CeEeeccCCCchHHHHH-HHHc-CCCc--EEEEEeCCHH---HHHHHHHHHHHcCCCeEEEEecCCCCC
Q 010971 175 APQEK------ERVIDMAAAPGGKTTYI-AALM-KNTG--LIYANEMKAS---RLKSLTANLHRMGVTNTIVCNYDGNEL 241 (496)
Q Consensus 175 ~~~~g------~~VLDmcAgpGgKT~~l-A~l~-~~~g--~V~A~D~s~~---rl~~l~~nl~r~g~~nv~v~~~D~~~~ 241 (496)
.+++| ++||-.+| |+.++.+ .++. +..| .|+++|.++. +++.+ +++|.+.+ ..+...+
T Consensus 163 ~~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~----~~lGa~~v---~~~~~~~ 233 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----EELDATYV---DSRQTPV 233 (357)
T ss_dssp HHTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH----HHTTCEEE---ETTTSCG
T ss_pred CCCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH----HHcCCccc---CCCccCH
Confidence 46789 99999997 6666655 5555 4333 4999999988 88765 35787544 3332222
Q ss_pred ccccC-CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 242 PKVLG-LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 242 ~~~~~-~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
..... .+.||+||- |+|.. ..+..+++++ ++||++|..
T Consensus 234 ~~i~~~~gg~Dvvid---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 272 (357)
T 2b5w_A 234 EDVPDVYEQMDFIYE---ATGFP-------------------------KHAIQSVQAL----APNGVGALL 272 (357)
T ss_dssp GGHHHHSCCEEEEEE---CSCCH-------------------------HHHHHHHHHE----EEEEEEEEC
T ss_pred HHHHHhCCCCCEEEE---CCCCh-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 22100 237999975 44421 1356777876 999998764
No 370
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=91.17 E-value=2.2 Score=39.75 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=55.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |+|+.+.+++..+-.. ..|++++.+..++..+.+.+...+. ++.++..|..+.... + ..+
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 356777555 6788888888765443 4899999999998888888776654 566778888764221 1 013
Q ss_pred CcCEEEECCCC
Q 010971 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~fD~VLlDaPC 259 (496)
.+|.|+..|-.
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999986543
No 371
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.98 E-value=0.66 Score=46.58 Aligned_cols=98 Identities=17% Similarity=0.200 Sum_probs=58.3
Q ss_pred CCCCCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc----cccCCCC
Q 010971 175 APQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLNT 249 (496)
Q Consensus 175 ~~~~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~----~~~~~~~ 249 (496)
.+++|++||-.+| .|+.+..++++... ...|++.|.++.+++.+ +.+|...+ +..+...+. .......
T Consensus 159 ~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~g~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 159 NVQAGDYVLIHAG-LSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA----EKLGAAAG--FNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp CCCTTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHTCSEE--EETTTSCHHHHHHHHTTTSC
T ss_pred CCCCCCEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCcEE--EecCChHHHHHHHHHhcCCC
Confidence 5788999998864 34444444443321 24899999999998776 34576532 333222221 1111246
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+|.|+- |+|.. .+..+++++ ++||++|...
T Consensus 232 ~d~vi~---~~G~~--------------------------~~~~~~~~l----~~~G~iv~~G 261 (354)
T 2j8z_A 232 VNLILD---CIGGS--------------------------YWEKNVNCL----ALDGRWVLYG 261 (354)
T ss_dssp EEEEEE---SSCGG--------------------------GHHHHHHHE----EEEEEEEECC
T ss_pred ceEEEE---CCCch--------------------------HHHHHHHhc----cCCCEEEEEe
Confidence 999976 33321 145566776 9999987643
No 372
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=90.95 E-value=3.2 Score=39.52 Aligned_cols=126 Identities=10% Similarity=0.074 Sum_probs=74.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHH-cCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHR-MGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r-~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|.+..+++.+...+.. .+-.++.++..|..+..... ..
T Consensus 7 ~~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTG-GSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 355666555 557788887775543 34899999999999998888876 55555788888987643211 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHH----HHHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~----l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
+..|.++..|--+..+.+ ...+.++... ...-...++..++..+.. +.+|.||+.+.
T Consensus 86 g~id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS 146 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTF-------AETTDEAWSEELQLKFFSVIHPVRAFLPQLES--RADAAIVCVNS 146 (265)
T ss_dssp CSCSEEEECCCCCCCBCT-------TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--STTEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCeEEEEECC
Confidence 578999987643322222 1223333322 222223445555555411 23677776543
No 373
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.93 E-value=1.7 Score=41.75 Aligned_cols=82 Identities=10% Similarity=0.101 Sum_probs=58.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCC-ccc---c-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL-PKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~-~~~---~-----~~ 247 (496)
.+.+||=.| |+||.+.+++..+- ....|++++.+..++..+...+...+-.++.++..|..+. ... . ..
T Consensus 11 ~~k~vlITG-as~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTG-GNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEec-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 356677555 55788888877653 3358999999999999988888877766788888998875 211 0 11
Q ss_pred CCcCEEEECCCCC
Q 010971 248 NTVDRVLLDAPCS 260 (496)
Q Consensus 248 ~~fD~VLlDaPCS 260 (496)
+.+|.|+..|-..
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 5799999976433
No 374
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.64 E-value=0.37 Score=47.90 Aligned_cols=98 Identities=22% Similarity=0.306 Sum_probs=58.6
Q ss_pred cCCCCCCeEeeccC--CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEec-CCCCCcccc---CC
Q 010971 174 LAPQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNY-DGNELPKVL---GL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcA--gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~-D~~~~~~~~---~~ 247 (496)
..+++|++||-.|| |-|..+..++..++ ..|+++|.++.+++.+++ .+|...+ +.. +...+.... ..
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~---~~g~~~~--~d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEKVDLLKT---KFGFDDA--FNYKEESDLTAALKRCFP 223 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH---TSCCSEE--EETTSCSCSHHHHHHHCT
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---HcCCceE--EecCCHHHHHHHHHHHhC
Confidence 45789999999886 22333344444432 489999999998876642 4676533 222 211221111 12
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
..+|.|+-- +|. ..+..+++++ ++||++|..
T Consensus 224 ~~~d~vi~~---~g~--------------------------~~~~~~~~~l----~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFEN---VGG--------------------------KMLDAVLVNM----NMHGRIAVC 254 (345)
T ss_dssp TCEEEEEES---SCH--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred CCCcEEEEC---CCH--------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 469998762 221 1366777776 999998763
No 375
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.48 E-value=0.28 Score=49.37 Aligned_cols=97 Identities=10% Similarity=0.081 Sum_probs=58.7
Q ss_pred CCC-CCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC-CCCccccCCCCcC
Q 010971 175 APQ-EKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPKVLGLNTVD 251 (496)
Q Consensus 175 ~~~-~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~-~~~~~~~~~~~fD 251 (496)
.++ +|++||=.+||+ |..++++|..++ ..|+++|.++.+++.+. +++|.+.+. ..+- ..+.... +.||
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~---~~lGa~~vi--~~~~~~~~~~~~--~g~D 246 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEAL---QDLGADDYV--IGSDQAKMSELA--DSLD 246 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHH---TTSCCSCEE--ETTCHHHHHHST--TTEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHH---HHcCCceee--ccccHHHHHHhc--CCCC
Confidence 567 999999997643 333344555543 48999999998876653 257876542 2221 1111111 4799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+||- |+|... .+..+++++ ++||++|...
T Consensus 247 ~vid---~~g~~~-------------------------~~~~~~~~l----~~~G~iv~~G 275 (357)
T 2cf5_A 247 YVID---TVPVHH-------------------------ALEPYLSLL----KLDGKLILMG 275 (357)
T ss_dssp EEEE---CCCSCC-------------------------CSHHHHTTE----EEEEEEEECS
T ss_pred EEEE---CCCChH-------------------------HHHHHHHHh----ccCCEEEEeC
Confidence 9875 554321 145566776 9999988643
No 376
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.47 E-value=0.49 Score=46.74 Aligned_cols=97 Identities=16% Similarity=0.114 Sum_probs=57.6
Q ss_pred CCCCCC-eEeeccC--CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC-CCCccccCCCCc
Q 010971 175 APQEKE-RVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPKVLGLNTV 250 (496)
Q Consensus 175 ~~~~g~-~VLDmcA--gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~-~~~~~~~~~~~f 250 (496)
.+++|+ +||-.+| |-|..++++|..++ ..|++.+.++.+++.++ .+|.+.+.-. .+. ...........|
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~~i~~-~~~~~~~~~~~~~~~~ 217 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLR----VLGAKEVLAR-EDVMAERIRPLDKQRW 217 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHH----HTTCSEEEEC-C---------CCSCCE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----HcCCcEEEec-CCcHHHHHHHhcCCcc
Confidence 577886 8998886 33444556666553 47999999988887664 4787654211 111 111111122469
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|+||- |+|.. .+..+++++ ++||++|..
T Consensus 218 d~vid---~~g~~--------------------------~~~~~~~~l----~~~G~~v~~ 245 (328)
T 1xa0_A 218 AAAVD---PVGGR--------------------------TLATVLSRM----RYGGAVAVS 245 (328)
T ss_dssp EEEEE---CSTTT--------------------------THHHHHHTE----EEEEEEEEC
T ss_pred cEEEE---CCcHH--------------------------HHHHHHHhh----ccCCEEEEE
Confidence 98874 44321 156677776 999998753
No 377
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.43 E-value=0.31 Score=48.43 Aligned_cols=98 Identities=19% Similarity=0.216 Sum_probs=60.0
Q ss_pred cCCCCCCeEeeccCC--CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc---CCC
Q 010971 174 LAPQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAg--pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~---~~~ 248 (496)
..+++|++||-.+|+ -|.-+++++..++ ..|+++|.++.+++.+. +.+|...+ +......+.... ..+
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~---~~~g~~~~--~~~~~~~~~~~~~~~~~~ 217 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLV---EELGFDGA--IDYKNEDLAAGLKRECPK 217 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH---HTTCCSEE--EETTTSCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH---HHcCCCEE--EECCCHHHHHHHHHhcCC
Confidence 368899999988762 3444444444432 48999999999887652 34677543 232222221111 124
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.||+|+- |+|. ..+..+++++ ++||++|..
T Consensus 218 ~~d~vi~---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 247 (336)
T 4b7c_A 218 GIDVFFD---NVGG--------------------------EILDTVLTRI----AFKARIVLC 247 (336)
T ss_dssp CEEEEEE---SSCH--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred CceEEEE---CCCc--------------------------chHHHHHHHH----hhCCEEEEE
Confidence 7998875 3331 1366777776 999998864
No 378
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.41 E-value=0.47 Score=47.09 Aligned_cols=96 Identities=17% Similarity=0.125 Sum_probs=59.2
Q ss_pred CCCCCCeEeeccCC--CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc----ccCCC
Q 010971 175 APQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDmcAg--pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----~~~~~ 248 (496)
.+++|++||-.+|+ -|..+++++..++ ..|+++|.++.+++.+ +.+|...+ +..+...+.. .....
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~~ga~~~--~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIA----KEYGAEYL--INASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHH----HHTTCSEE--EETTTSCHHHHHHHHTTTS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH----HHcCCcEE--EeCCCchHHHHHHHHhCCC
Confidence 57899999988742 2333444444442 4899999999998865 44676543 3332222211 11234
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.||+|+- |+|.. .+..+++++ ++||++|..
T Consensus 217 g~D~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 246 (334)
T 3qwb_A 217 GVDASFD---SVGKD--------------------------TFEISLAAL----KRKGVFVSF 246 (334)
T ss_dssp CEEEEEE---CCGGG--------------------------GHHHHHHHE----EEEEEEEEC
T ss_pred CceEEEE---CCChH--------------------------HHHHHHHHh----ccCCEEEEE
Confidence 7999876 44321 256677776 999998864
No 379
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.41 E-value=0.83 Score=45.14 Aligned_cols=96 Identities=17% Similarity=0.169 Sum_probs=60.0
Q ss_pred CCCCCCeEeeccC-C-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc----ccCCC
Q 010971 175 APQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK----VLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDmcA-g-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~----~~~~~ 248 (496)
.+++|++||-.++ | -|..+++++..++ ..|++.|.++.+++.++ .+|...+ ++.+...+.. .....
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAK----ALGAWET--IDYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTTC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCCEE--EeCCCccHHHHHHHHhCCC
Confidence 5789999998773 2 2444445555543 48999999999988765 4676543 3332222211 11224
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+|+|+- |+|.. .+..+++++ ++||++|..
T Consensus 209 g~Dvvid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 238 (325)
T 3jyn_A 209 KCPVVYD---GVGQD--------------------------TWLTSLDSV----APRGLVVSF 238 (325)
T ss_dssp CEEEEEE---SSCGG--------------------------GHHHHHTTE----EEEEEEEEC
T ss_pred CceEEEE---CCChH--------------------------HHHHHHHHh----cCCCEEEEE
Confidence 7998875 44421 256677776 999998864
No 380
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.39 E-value=4.8 Score=38.87 Aligned_cols=82 Identities=13% Similarity=-0.041 Sum_probs=53.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEE-ecCCCCCccccC-CCCcCEEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVC-NYDGNELPKVLG-LNTVDRVL 254 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~-~~D~~~~~~~~~-~~~fD~VL 254 (496)
.+.+||=. -|+|+.+.+++..+... ..|++++.+......+...+....-.++.++ ..|..+...... ...+|.|+
T Consensus 10 ~~~~vlVT-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVT-GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEE-CCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 46778844 46799999888755433 4899999998887766655543222456666 678765432210 14789999
Q ss_pred ECCCCC
Q 010971 255 LDAPCS 260 (496)
Q Consensus 255 lDaPCS 260 (496)
.-|..+
T Consensus 89 h~A~~~ 94 (342)
T 1y1p_A 89 HIASVV 94 (342)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 876544
No 381
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.18 E-value=4.2 Score=38.77 Aligned_cols=79 Identities=14% Similarity=0.092 Sum_probs=55.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |+|+.+.+++..+. ....|+++|.+..++..+...+...|. ++.++..|..+.... + ..+
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 356777555 56888888887553 334899999999999888888877664 577788888764321 1 124
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 108 ~iD~li~~Ag 117 (272)
T 1yb1_A 108 DVSILVNNAG 117 (272)
T ss_dssp CCSEEEECCC
T ss_pred CCcEEEECCC
Confidence 7999998764
No 382
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.14 E-value=2.1 Score=40.81 Aligned_cols=80 Identities=15% Similarity=0.173 Sum_probs=58.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|.+...++.+...+...+..++.++..|..+..... ..+
T Consensus 9 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTG-GTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 466777555 557788888876533 3489999999999999988888877667888889987743211 114
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.++..|-
T Consensus 88 ~id~lvnnAg 97 (262)
T 3pk0_A 88 GIDVVCANAG 97 (262)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998764
No 383
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=89.91 E-value=0.33 Score=48.73 Aligned_cols=49 Identities=12% Similarity=0.070 Sum_probs=36.9
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCH---HHHHHHHHHHHHcC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKA---SRLKSLTANLHRMG 227 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~---~rl~~l~~nl~r~g 227 (496)
-.+|+.|||-+||+|..+.....+ + ...+++|+++ .-++.+.+++.+.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~-~--r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE-G--RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH-T--CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc-C--CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 368999999999999866544443 2 5789999999 99999999888765
No 384
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.90 E-value=0.49 Score=46.86 Aligned_cols=99 Identities=17% Similarity=0.204 Sum_probs=58.4
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc---CCCC
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLNT 249 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~---~~~~ 249 (496)
..+++|++||-.||+ |+.+..+++++. ....|+++|.++.+++.+ +.+|...+ +-..|...+...+ ..+.
T Consensus 141 ~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~~-~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 141 CGVKGGETVLVSAAA-GAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL----KQIGFDAA-FNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SCCCSSCEEEEESTT-BHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE-EETTSCSCHHHHHHHHCTTC
T ss_pred hCCCCCCEEEEecCC-CcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HhcCCcEE-EecCCHHHHHHHHHHHhCCC
Confidence 357899999998863 445554444432 124899999999888766 34576432 2111212221111 1147
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
+|.|+..+ |. ..+..+++++ ++||++|..
T Consensus 215 ~d~vi~~~---g~--------------------------~~~~~~~~~l----~~~G~~v~~ 243 (333)
T 1v3u_A 215 YDCYFDNV---GG--------------------------EFLNTVLSQM----KDFGKIAIC 243 (333)
T ss_dssp EEEEEESS---CH--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred CeEEEECC---Ch--------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 99987633 20 1256677776 999998764
No 385
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.90 E-value=0.26 Score=49.34 Aligned_cols=51 Identities=12% Similarity=0.115 Sum_probs=41.0
Q ss_pred CCCCCeEeeccCCCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCC
Q 010971 176 PQEKERVIDMAAAPGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVT 229 (496)
Q Consensus 176 ~~~g~~VLDmcAgpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~ 229 (496)
-.+|+.|||-+||+|..+. .|..++ ...+++|+++..+..+..++.+.+..
T Consensus 250 ~~~~~~VlDpF~GsGtt~~-aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~~~~ 300 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGL-VAERES--RKWISFEMKPEYVAASAFRFLDNNIS 300 (323)
T ss_dssp CCTTCEEEETTCTTCHHHH-HHHHTT--CEEEEEESCHHHHHHHHGGGSCSCSC
T ss_pred CCCCCEEEECCCCCCHHHH-HHHHcC--CCEEEEeCCHHHHHHHHHHHHhcccc
Confidence 3689999999999998554 344443 58999999999999999998877653
No 386
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.80 E-value=1.6 Score=41.29 Aligned_cols=128 Identities=12% Similarity=0.054 Sum_probs=72.3
Q ss_pred CCCCeEeeccCC-CchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------C
Q 010971 177 QEKERVIDMAAA-PGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------G 246 (496)
Q Consensus 177 ~~g~~VLDmcAg-pGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~ 246 (496)
..+.+||=.|++ +||.+.+++..+- ....|+.++.+....+.+.+.....+ .+.++..|..+..... .
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 457888888874 4788888877653 33489999888655555555555554 3667788887643211 1
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhcc-CCHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTS-KSLEDIQKCSY----LQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~-~s~~~i~~l~~----lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.+..|.++..|--...+.+. .-.+. .+.+++..... -...++..++..+ +++|.||+.+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~g~iv~isS 154 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIA---GDFLDGLTRENFRIAHDISAYSFPALAKAALPML----SDDASLLTLSY 154 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGS---SCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE----EEEEEEEEEEC
T ss_pred cCCCCEEEECCccCcccccc---CccccccCHHHHHHHHhhhHHHHHHHHHHHHHHh----ccCceEEEEec
Confidence 25789999866322210000 00111 34444433322 2233445555544 66888887654
No 387
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.60 E-value=0.41 Score=48.39 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=58.1
Q ss_pred CCC-CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCC-CCccccCCCCcC
Q 010971 175 APQ-EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGN-ELPKVLGLNTVD 251 (496)
Q Consensus 175 ~~~-~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~-~~~~~~~~~~fD 251 (496)
.++ +|++||=.++ |+.++.++++... ...|++++.++.+++.+. +.+|...+ +..+-. .+.... +.||
T Consensus 183 ~~~~~g~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~---~~lGa~~v--~~~~~~~~~~~~~--~~~D 253 (366)
T 1yqd_A 183 GLDEPGKHIGIVGL--GGLGHVAVKFAKAFGSKVTVISTSPSKKEEAL---KNFGADSF--LVSRDQEQMQAAA--GTLD 253 (366)
T ss_dssp TCCCTTCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHH---HTSCCSEE--EETTCHHHHHHTT--TCEE
T ss_pred CcCCCCCEEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HhcCCceE--EeccCHHHHHHhh--CCCC
Confidence 566 8999999885 5555544443321 148999999998876653 35777543 222211 111111 4799
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
+||- |+|... .+..+++++ ++||++|...
T Consensus 254 ~vid---~~g~~~-------------------------~~~~~~~~l----~~~G~iv~~g 282 (366)
T 1yqd_A 254 GIID---TVSAVH-------------------------PLLPLFGLL----KSHGKLILVG 282 (366)
T ss_dssp EEEE---CCSSCC-------------------------CSHHHHHHE----EEEEEEEECC
T ss_pred EEEE---CCCcHH-------------------------HHHHHHHHH----hcCCEEEEEc
Confidence 9985 444321 134566666 8999987643
No 388
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.57 E-value=2.4 Score=39.78 Aligned_cols=79 Identities=14% Similarity=0.167 Sum_probs=56.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |+||.+.+++..+-. ...|+++|.+...+..+...+...+. .+.++..|..+..... ..+
T Consensus 8 ~~k~vlITG-as~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTG-SGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 356677555 567888888776543 34899999999999999888877664 5677788987743211 014
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 86 ~id~li~~Ag 95 (253)
T 3qiv_A 86 GIDYLVNNAA 95 (253)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998664
No 389
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.29 E-value=0.57 Score=47.23 Aligned_cols=98 Identities=19% Similarity=0.200 Sum_probs=61.4
Q ss_pred cCCCCCCeEeeccC-C-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc---CCC
Q 010971 174 LAPQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcA-g-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~---~~~ 248 (496)
..+++|++||-.+| | .|..+++++..++ ..|++.+.++.+++.++ .+|...+ +..+...+.... ...
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~~~~~~~~ 230 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFLK----SLGCDRP--INYKTEPVGTVLKQEYPE 230 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTTCSEE--EETTTSCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHH----HcCCcEE--EecCChhHHHHHHHhcCC
Confidence 36789999999883 3 3445555665553 48999999999887764 3787643 333322221111 124
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.+|+|+- |+|. ..+..+++++ ++||++|...
T Consensus 231 g~D~vid---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~g 261 (362)
T 2c0c_A 231 GVDVVYE---SVGG--------------------------AMFDLAVDAL----ATKGRLIVIG 261 (362)
T ss_dssp CEEEEEE---CSCT--------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred CCCEEEE---CCCH--------------------------HHHHHHHHHH----hcCCEEEEEe
Confidence 6999875 3331 1255677776 8999987643
No 390
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=89.25 E-value=3.5 Score=38.99 Aligned_cols=79 Identities=10% Similarity=0.087 Sum_probs=54.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CC-
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL- 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~- 247 (496)
.|.+||=.| |+||.+.+++..+-. ...|++++.+..++..+...+...|. ++.++..|..+.... + ..
T Consensus 8 ~~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTG-GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356777554 568888888775533 34899999999998888777766653 567778888764221 1 01
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+.+|.|+..|-
T Consensus 86 g~id~lv~~Ag 96 (260)
T 2ae2_A 86 GKLNILVNNAG 96 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999998764
No 391
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=89.23 E-value=3.4 Score=39.93 Aligned_cols=80 Identities=11% Similarity=0.033 Sum_probs=55.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+..+++.+.+.+...+-..+.++..|..+..... ..+
T Consensus 32 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTG-GGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 466777555 55788888887653 33589999999999998888887766555678888987643211 115
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.++..|-
T Consensus 111 ~iD~lvnnAG 120 (281)
T 4dry_A 111 RLDLLVNNAG 120 (281)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998664
No 392
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=89.22 E-value=1 Score=44.90 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=58.9
Q ss_pred CCCCCCeEeeccCC--CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCC----ccccCCC
Q 010971 175 APQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNEL----PKVLGLN 248 (496)
Q Consensus 175 ~~~~g~~VLDmcAg--pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~----~~~~~~~ 248 (496)
.+++|++||-.++| .|..+++++..+.+ ..|+++|.++.+++.++ .+|...+ +......+ ......+
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAK----RAGADYV--INASMQDPLAEIRRITESK 239 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHH----HHTCSEE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHH----HhCCCEE--ecCCCccHHHHHHHHhcCC
Confidence 57899999999986 23334444444412 48999999999987663 4676533 22221221 1111114
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+|+|+- |+|.. ..+..+++++ ++||++|..
T Consensus 240 ~~d~vi~---~~g~~-------------------------~~~~~~~~~l----~~~G~iv~~ 270 (347)
T 1jvb_A 240 GVDAVID---LNNSE-------------------------KTLSVYPKAL----AKQGKYVMV 270 (347)
T ss_dssp CEEEEEE---SCCCH-------------------------HHHTTGGGGE----EEEEEEEEC
T ss_pred CceEEEE---CCCCH-------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 7999886 33321 1356666766 999998763
No 393
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.93 E-value=0.69 Score=48.24 Aligned_cols=52 Identities=13% Similarity=0.043 Sum_probs=36.7
Q ss_pred cCCCCCCeEeeccC-C-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeE
Q 010971 174 LAPQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 174 L~~~~g~~VLDmcA-g-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv 231 (496)
..+++|++||=.+| | -|..++++|..++ ..|++++.++.+++.+ +.+|...+
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~----~~lGa~~v 277 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEIC----RAMGAEAI 277 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHH----HHHTCCEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHH----HhhCCcEE
Confidence 35789999998876 3 3445555666553 4788899999998876 45787643
No 394
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.92 E-value=4.5 Score=38.28 Aligned_cols=79 Identities=11% Similarity=0.082 Sum_probs=56.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |+||.+.+++..+. ....|+.++.+..++..+...+...|. ++.++..|..+..... ..+
T Consensus 28 ~~k~vlITG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTG-ASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 466777555 56778888877653 334899999999999999888887764 5777888987643211 114
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
..|.|+..|-
T Consensus 106 ~id~lv~~Ag 115 (262)
T 3rkr_A 106 RCDVLVNNAG 115 (262)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998664
No 395
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.92 E-value=4.8 Score=37.44 Aligned_cols=79 Identities=8% Similarity=0.084 Sum_probs=56.3
Q ss_pred CCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~~ 249 (496)
|.+||=.| |+||.+.+++..+-. ...|++++.+...++.+...+...|. .+.++..|..+..... ..+.
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVALVTG-ASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 55666555 567888887776543 34899999999999999888888765 4777788887642211 1257
Q ss_pred cCEEEECCCC
Q 010971 250 VDRVLLDAPC 259 (496)
Q Consensus 250 fD~VLlDaPC 259 (496)
+|.|+..|--
T Consensus 83 id~li~~Ag~ 92 (247)
T 3lyl_A 83 IDILVNNAGI 92 (247)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987643
No 396
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=88.90 E-value=4.3 Score=38.00 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=54.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeC-CHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~ 247 (496)
.|.+||=.| |+|+.+.+++..+- ....|++++. +...+..+...+...+. ++.++..|..+.... + ..
T Consensus 6 ~~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356677555 56888888877553 3358999999 88888888777776653 567778888764321 1 01
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+.+|.|+..|-
T Consensus 84 g~id~li~~Ag 94 (261)
T 1gee_A 84 GKLDVMINNAG 94 (261)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37899998664
No 397
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.83 E-value=4.8 Score=37.42 Aligned_cols=128 Identities=12% Similarity=0.127 Sum_probs=75.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC--CCCccc---c-----C
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~--~~~~~~---~-----~ 246 (496)
.|.+||=.| |+||.+.+++..+-. ...|+.++.+..+++.+.+.+...+..++.++..|. .+.... . .
T Consensus 13 ~~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTG-AARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 466777555 567888888776543 348999999999999999999888866666666665 432111 0 1
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l----~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+.+|.|+..|-..+.. .| ....+.++.... ..-...++..++..+.. ..+|.||+.+.+
T Consensus 92 ~g~id~lv~nAg~~~~~----~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~~~iv~isS~ 155 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPR----TP--LEQLPDEDFMQVMHVNVNATFMLTRALLPLLKR--SEDASIAFTSSS 155 (247)
T ss_dssp HSCCSEEEECCCCCCCC----SC--GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--SSSEEEEEECCG
T ss_pred CCCCCEEEECCccCCCC----CC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--CCCCeEEEEcch
Confidence 14799999876543211 00 112233333222 22233455555555411 346788886543
No 398
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=88.81 E-value=4.5 Score=38.49 Aligned_cols=81 Identities=9% Similarity=0.014 Sum_probs=55.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEecCCCCCccc---c-CCCCcC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGV-TNTIVCNYDGNELPKV---L-GLNTVD 251 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~-~nv~v~~~D~~~~~~~---~-~~~~fD 251 (496)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+...+..+.+.+...+. ..+.++..|..+.... . ..+..|
T Consensus 9 ~~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTG-STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 356777555 55778888877553 334899999999999888888877653 3466777887763211 1 125799
Q ss_pred EEEECCCC
Q 010971 252 RVLLDAPC 259 (496)
Q Consensus 252 ~VLlDaPC 259 (496)
.++..|-.
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987643
No 399
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.71 E-value=0.47 Score=47.35 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=58.5
Q ss_pred hcCCCCCCeEeeccCCC-chHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc---CCC
Q 010971 173 ALAPQEKERVIDMAAAP-GGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---GLN 248 (496)
Q Consensus 173 ~L~~~~g~~VLDmcAgp-GgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~---~~~ 248 (496)
.+.+ +|++||-.+||+ |..++++|..++ .+.|++.|.++.+++.+++ + ... ++..+...+.... ...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~----l-a~~--v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYRLAFARP----Y-ADR--LVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHGGGTT----T-CSE--EECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----h-HHh--ccCcCccCHHHHHHHhcCC
Confidence 3457 999999999843 333444555442 2379999999998876643 3 332 2333222221111 024
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.||+||- |+|. ...+..+++++ ++||++|..
T Consensus 231 g~D~vid---~~g~-------------------------~~~~~~~~~~l----~~~G~iv~~ 261 (343)
T 2dq4_A 231 GVEVLLE---FSGN-------------------------EAAIHQGLMAL----IPGGEARIL 261 (343)
T ss_dssp CEEEEEE---CSCC-------------------------HHHHHHHHHHE----EEEEEEEEC
T ss_pred CCCEEEE---CCCC-------------------------HHHHHHHHHHH----hcCCEEEEE
Confidence 7999975 3332 12356777776 999998764
No 400
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=88.62 E-value=3 Score=39.22 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=54.3
Q ss_pred CCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~~ 249 (496)
|.+||=.| |+||.+.+++..+-. ...|++++.+..+++.+.+.+...|. ++.++..|..+..... ..+.
T Consensus 7 ~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 7 GKVALITG-ASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 55666555 567888888776543 34899999999999888888876654 5677788887642210 0147
Q ss_pred cCEEEECCC
Q 010971 250 VDRVLLDAP 258 (496)
Q Consensus 250 fD~VLlDaP 258 (496)
+|.|+..|-
T Consensus 85 id~lv~nAg 93 (247)
T 2jah_A 85 LDILVNNAG 93 (247)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999998664
No 401
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=88.56 E-value=1.1 Score=44.01 Aligned_cols=95 Identities=13% Similarity=0.139 Sum_probs=57.6
Q ss_pred CCCCC-eEeeccC--CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCE
Q 010971 176 PQEKE-RVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDR 252 (496)
Q Consensus 176 ~~~g~-~VLDmcA--gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~ 252 (496)
+++++ +||=.+| +.|..++++|..++ ..|++++.++.+++.++ .+|.+.+.- ..|.... ..+..+.+|+
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~vi~-~~~~~~~-~~~~~~~~d~ 214 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLK----SLGANRILS-RDEFAES-RPLEKQLWAG 214 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHH----HHTCSEEEE-GGGSSCC-CSSCCCCEEE
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----hcCCCEEEe-cCCHHHH-HhhcCCCccE
Confidence 45532 4887765 33555566666653 48999999999988775 478765432 1221111 1122357998
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
||- |+|. ..+..+++++ ++||++|..
T Consensus 215 v~d---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 240 (324)
T 3nx4_A 215 AID---TVGD--------------------------KVLAKVLAQM----NYGGCVAAC 240 (324)
T ss_dssp EEE---SSCH--------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred EEE---CCCc--------------------------HHHHHHHHHH----hcCCEEEEE
Confidence 764 3321 1367778887 999999864
No 402
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=88.50 E-value=3.9 Score=38.96 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=56.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEecCCCCCccc---c-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVT-NTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~-nv~v~~~D~~~~~~~---~-----~~ 247 (496)
.|.+||=.| |+|+.+.+++..+.. ...|++++.+..++..+...+...|.. .+.++..|..+.... + ..
T Consensus 31 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 356677554 668888888875533 348999999999999888888877753 577788898764321 1 01
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+.+|.|+..|-
T Consensus 110 g~iD~vi~~Ag 120 (279)
T 1xg5_A 110 SGVDICINNAG 120 (279)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999988653
No 403
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=88.45 E-value=3.4 Score=40.23 Aligned_cols=127 Identities=16% Similarity=0.151 Sum_probs=74.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCC--eEEEEecCCCCCccc---c-----C
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~--nv~v~~~D~~~~~~~---~-----~ 246 (496)
.|.+||=.| |+||.+.+++..+- ....|++++.+..+++.+...+...|.. ++.++..|..+.... + .
T Consensus 25 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITG-SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 356677555 56788888887654 3348999999999998888888776642 577788898764321 1 0
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.+.+|.|+..|-....+ |......+.++..... .-...++..++..+. +.+|.||+.+.
T Consensus 104 ~g~iD~lvnnAG~~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~---~~~g~IV~isS 166 (297)
T 1xhl_A 104 FGKIDILVNNAGANLAD-----GTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI---KTKGEIVNVSS 166 (297)
T ss_dssp HSCCCEEEECCCCCCCC-----SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH---HTTCEEEEECC
T ss_pred cCCCCEEEECCCcCcCC-----CCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH---hcCCEEEEEcC
Confidence 14789999876432221 2111223333333221 222334555555441 34588887654
No 404
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=88.44 E-value=2.9 Score=39.58 Aligned_cols=124 Identities=14% Similarity=0.164 Sum_probs=74.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|.+...++.+...+...|. ++.++..|..+..... ..+
T Consensus 11 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTG-AAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECS-CSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356666555 557788877765533 34899999999999999888887764 5677788887642211 114
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l----~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
..|.++..|--+..+.+ ..+.++.... ..-...++..++..+.. ..+|.||+.+.
T Consensus 89 ~id~lv~nAg~~~~~~~--------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~iv~isS 147 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPF--------DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQK--AGGGAILNISS 147 (256)
T ss_dssp CCCEEEECCCCCCCCCT--------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECC
T ss_pred CCCEEEECCCCCCCCCC--------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEEcC
Confidence 78999987643332222 2333333322 12223345555544311 34688887654
No 405
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.31 E-value=0.28 Score=47.98 Aligned_cols=92 Identities=23% Similarity=0.317 Sum_probs=58.2
Q ss_pred CCCCCeEeeccC-C-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC-CCCccccCCCCcCE
Q 010971 176 PQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG-NELPKVLGLNTVDR 252 (496)
Q Consensus 176 ~~~g~~VLDmcA-g-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~-~~~~~~~~~~~fD~ 252 (496)
+++|++||-.|| | .|..+++++..++ ..|+++|.++.+++.++ .+|...+ +..+. ..+.... ..||.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~~--~~~~~~~~~~~~~--~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPL----ALGAEEA--ATYAEVPERAKAW--GGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHH----HTTCSEE--EEGGGHHHHHHHT--TSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCEE--EECCcchhHHHHh--cCceE
Confidence 789999999886 2 2444455555543 48999999999887663 4787643 22221 1222222 57999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|+- +. + . .+..+++++ ++||++|..
T Consensus 193 vid-~g--~-~--------------------------~~~~~~~~l----~~~G~~v~~ 217 (302)
T 1iz0_A 193 VLE-VR--G-K--------------------------EVEESLGLL----AHGGRLVYI 217 (302)
T ss_dssp EEE-CS--C-T--------------------------THHHHHTTE----EEEEEEEEC
T ss_pred EEE-CC--H-H--------------------------HHHHHHHhh----ccCCEEEEE
Confidence 876 43 1 0 156677776 999998753
No 406
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.30 E-value=1.5 Score=43.26 Aligned_cols=98 Identities=20% Similarity=0.191 Sum_probs=58.7
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc----cccCCC
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~----~~~~~~ 248 (496)
..+++|++||-.+++ |+.+..++++... ...|+++|.++.+++.+.+ +|...+ +..+-..+. ......
T Consensus 136 ~~~~~g~~vlV~Ga~-ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 136 YEIKPDEQFLFHAAA-GGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAWQV--INYREEDLVERLKEITGGK 208 (327)
T ss_dssp SCCCTTCEEEESSTT-BHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHTTTC
T ss_pred hCCCCCCEEEEECCC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCEE--EECCCccHHHHHHHHhCCC
Confidence 357889999988743 4444444443321 2489999999998877654 576532 222212221 111124
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+|+|+- |+| +- .+..+++++ ++||++|..
T Consensus 209 ~~D~vi~---~~g-~~-------------------------~~~~~~~~l----~~~G~iv~~ 238 (327)
T 1qor_A 209 KVRVVYD---SVG-RD-------------------------TWERSLDCL----QRRGLMVSF 238 (327)
T ss_dssp CEEEEEE---CSC-GG-------------------------GHHHHHHTE----EEEEEEEEC
T ss_pred CceEEEE---CCc-hH-------------------------HHHHHHHHh----cCCCEEEEE
Confidence 6999986 344 21 256677776 999998754
No 407
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=88.28 E-value=0.54 Score=47.38 Aligned_cols=91 Identities=12% Similarity=0.127 Sum_probs=55.7
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCH---HHHHHHHHHHHHcCCCeEEEEecCCCCCccccC--CCCcCE
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKA---SRLKSLTANLHRMGVTNTIVCNYDGNELPKVLG--LNTVDR 252 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~---~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~--~~~fD~ 252 (496)
|++||-.+| |+.++.++++.... ..|+++|.++ .+++.+ +.+|.+.+ ..+ .+..... ...||+
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----~~~ga~~v---~~~--~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI----EETKTNYY---NSS--NGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH----HHHTCEEE---ECT--TCSHHHHHHHCCEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH----HHhCCcee---chH--HHHHHHHHhCCCCCE
Confidence 999999997 66665554443321 3899999998 777554 34677543 222 2221110 146999
Q ss_pred EEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHH-HHHHHhhhhcCCCCcEEEEEe
Q 010971 253 VLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLI-LAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 253 VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL-~~A~~~l~~~lkpGG~LVYST 312 (496)
|+- |+|... .+ ..+++++ ++||++|...
T Consensus 250 vid---~~g~~~-------------------------~~~~~~~~~l----~~~G~iv~~g 278 (366)
T 2cdc_A 250 IID---ATGADV-------------------------NILGNVIPLL----GRNGVLGLFG 278 (366)
T ss_dssp EEE---CCCCCT-------------------------HHHHHHGGGE----EEEEEEEECS
T ss_pred EEE---CCCChH-------------------------HHHHHHHHHH----hcCCEEEEEe
Confidence 986 444310 24 6677776 9999987643
No 408
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=88.22 E-value=8.2 Score=36.56 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=54.4
Q ss_pred CCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHc-CCCeEEEEecCCCCC----cccc------
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRM-GVTNTIVCNYDGNEL----PKVL------ 245 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~-s~~rl~~l~~nl~r~-g~~nv~v~~~D~~~~----~~~~------ 245 (496)
|.+|| +.-|+||.+.+++..+-. ...|++++. +..+++.+.+.+... | .++.++..|..+. ....
T Consensus 11 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAV-ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHHHH
Confidence 55677 445668888888876543 348999999 999888887777665 4 3577778888765 2211
Q ss_pred --CCCCcCEEEECCCC
Q 010971 246 --GLNTVDRVLLDAPC 259 (496)
Q Consensus 246 --~~~~fD~VLlDaPC 259 (496)
..+.+|.|+..|-.
T Consensus 89 ~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 01478999987643
No 409
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.18 E-value=2.4 Score=41.84 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=59.1
Q ss_pred cCCCCCCeEeeccC--CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc----cccCC
Q 010971 174 LAPQEKERVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGL 247 (496)
Q Consensus 174 L~~~~g~~VLDmcA--gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~----~~~~~ 247 (496)
..+++|++||-.+| |-|..+..++..++ ..|+++|.++.+++.+++ +|...+ +..+...+. .....
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~----~g~~~~--~d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 141 HKVKPGDYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEEKAETARK----LGCHHT--INYSTQDFAEVVREITGG 212 (333)
T ss_dssp SCCCTTCEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHHTT
T ss_pred hCCCCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCCEE--EECCCHHHHHHHHHHhCC
Confidence 35789999998875 33444444444442 489999999988887643 576532 232222221 11112
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
..+|.|+- |+|.. .+..+++++ ++||++|..
T Consensus 213 ~~~d~vi~---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 243 (333)
T 1wly_A 213 KGVDVVYD---SIGKD--------------------------TLQKSLDCL----RPRGMCAAY 243 (333)
T ss_dssp CCEEEEEE---CSCTT--------------------------THHHHHHTE----EEEEEEEEC
T ss_pred CCCeEEEE---CCcHH--------------------------HHHHHHHhh----ccCCEEEEE
Confidence 46999986 44321 256677776 999988753
No 410
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.98 E-value=3 Score=39.77 Aligned_cols=121 Identities=14% Similarity=0.139 Sum_probs=73.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCC------------HHHHHHHHHHHHHcCCCeEEEEecCCCCCccc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~ 244 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|.+ ...+..+...+...|. ++.++..|..+....
T Consensus 9 ~gk~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTG-GARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHH
Confidence 466777555 557788887775543 3489999987 8888888888877764 577788898764321
Q ss_pred c--------CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 245 L--------GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 245 ~--------~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
. ..+..|.|+..|-....+ . ..+.++..... .-...++..++.. ++.+|.||+.+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~-----~----~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLG-----A----HLPVQAFADAFDVDFVGVINTVHAALPY----LTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCC-----T----TCCTHHHHHHHHHHTHHHHHHHHHHGGG----CCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCccc-----C----cCCHHHHHHHhhhhhhhhHHHHHHHHHH----hhcCcEEEEec
Confidence 1 114799999876433322 1 12233332222 2223344445444 47889988865
Q ss_pred C
Q 010971 313 C 313 (496)
Q Consensus 313 C 313 (496)
.
T Consensus 154 S 154 (287)
T 3pxx_A 154 S 154 (287)
T ss_dssp C
T ss_pred c
Confidence 4
No 411
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=87.88 E-value=5 Score=37.39 Aligned_cols=79 Identities=16% Similarity=0.173 Sum_probs=52.1
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-CCCCcC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-GLNTVD 251 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-~~~~fD 251 (496)
.++.+||=.| |+||.+.+++..+.. ...|+.++.+..+++.+.+.+. .++.+...|....... + ..+.+|
T Consensus 12 ~~~k~vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITG-ASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 3567788555 567788888776543 3489999999998887766553 3567777887764211 1 124799
Q ss_pred EEEECCCCC
Q 010971 252 RVLLDAPCS 260 (496)
Q Consensus 252 ~VLlDaPCS 260 (496)
.|+..|-..
T Consensus 87 ~li~~Ag~~ 95 (249)
T 3f9i_A 87 ILVCNAGIT 95 (249)
T ss_dssp EEEECCC--
T ss_pred EEEECCCCC
Confidence 999876543
No 412
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=87.83 E-value=3.5 Score=38.08 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=53.2
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHH-HcCCCeEEEEecCCCCCccc---cC-----CC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLH-RMGVTNTIVCNYDGNELPKV---LG-----LN 248 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~-r~g~~nv~v~~~D~~~~~~~---~~-----~~ 248 (496)
+.+||=. -|+||.+.+++..+... ..|+.++.+..++..+...+. ..| .++.++..|..+.... +. .+
T Consensus 2 ~k~vlIT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVIT-GASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEE-SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEE-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 3455544 45678888888765433 489999999999988888776 444 3577788888764221 10 14
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.++..|-
T Consensus 80 ~id~li~~Ag 89 (235)
T 3l77_A 80 DVDVVVANAG 89 (235)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 7899998664
No 413
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=87.53 E-value=4.8 Score=38.51 Aligned_cols=80 Identities=11% Similarity=0.022 Sum_probs=57.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCC--eEEEEecCCCCCcccc--------C
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKVL--------G 246 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~--nv~v~~~D~~~~~~~~--------~ 246 (496)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+...+..+.+.+...+.. .+.++..|..+..... .
T Consensus 10 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTG-GGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 356677555 56778888877553 3348999999999999999888887753 5778888987643211 1
Q ss_pred CCCcCEEEECCC
Q 010971 247 LNTVDRVLLDAP 258 (496)
Q Consensus 247 ~~~fD~VLlDaP 258 (496)
.+.+|.++..|-
T Consensus 89 ~g~id~lv~nAg 100 (281)
T 3svt_A 89 HGRLHGVVHCAG 100 (281)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998664
No 414
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=87.50 E-value=4.2 Score=38.74 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=55.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHH-cCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHR-MGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r-~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.++.+...+..+...+.. .+. .+.++..|..+..... ..
T Consensus 19 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITG-ATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 466777555 557788887776533 34899999999999888887766 443 5777888987753211 11
Q ss_pred CCcCEEEECCCC
Q 010971 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~fD~VLlDaPC 259 (496)
+..|.++..|--
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 479999987643
No 415
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=87.43 E-value=6 Score=37.65 Aligned_cols=125 Identities=13% Similarity=0.200 Sum_probs=74.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeC-CHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |.||.+.+++..+-.. ..|+.++. +...++.+.+.+...|. ++.++..|..+..... ..
T Consensus 17 ~~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTG-SGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESC-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 466777555 5577788877765433 46777665 67778888888887764 4667788887643211 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCSI 315 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi 315 (496)
+..|.++..|--...+.+ ...+.++..... .-...++..++..+ +.+|.||+.+.+.
T Consensus 95 g~id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~----~~~g~iv~isS~~ 155 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHL-------KDVTEEEFDRVFSLNTRGQFFVAREAYRHL----TEGGRIVLTSSNT 155 (270)
T ss_dssp SCCCEEECCCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHC----CTTCEEEEECCTT
T ss_pred CCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hcCCeEEEEeCch
Confidence 478999886643322221 223444433222 22334556666654 7789988865543
No 416
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.43 E-value=2.5 Score=44.20 Aligned_cols=117 Identities=10% Similarity=0.159 Sum_probs=67.2
Q ss_pred CCchHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHH------------HHHc-CCCeEEEEecCCCCCccccCCCCcCEE
Q 010971 188 APGGKTTYIAALMKNTG-LIYANEMKASRLKSLTAN------------LHRM-GVTNTIVCNYDGNELPKVLGLNTVDRV 253 (496)
Q Consensus 188 gpGgKT~~lA~l~~~~g-~V~A~D~s~~rl~~l~~n------------l~r~-g~~nv~v~~~D~~~~~~~~~~~~fD~V 253 (496)
|.|..++.+|..+...| .|+++|+++++++.+.+. +++. .-.++.+. .|. ...|+|
T Consensus 18 GlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td~---------~~aDvv 87 (431)
T 3ojo_A 18 GLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TTP---------EASDVF 87 (431)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SSC---------CCCSEE
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cch---------hhCCEE
Confidence 55666666666654444 899999999999998763 1110 01233333 231 357999
Q ss_pred EECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCCCCCcCCHHHHHHHHHhCC
Q 010971 254 LLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYSTCSIMVTENEAVIDYALKKRD 332 (496)
Q Consensus 254 LlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCSi~~eENE~vV~~~L~~~~ 332 (496)
++=.|-....--...|++.. +..+.+.+.+.+++|..+|+. .|+.|.-.+.+...+++..+
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~-----------------V~~~~~~i~~~l~~g~iVV~~-STV~pgtt~~v~~~i~e~~g 148 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISL-----------------VMRALDSILPFLKKGNTIIVE-STIAPKTMDDFVKPVIENLG 148 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHH-----------------HHHHHHHHGGGCCTTEEEEEC-SCCCTTHHHHTHHHHHHTTT
T ss_pred EEEeCCCccccccCCccHHH-----------------HHHHHHHHHHhCCCCCEEEEe-cCCChhHHHHHHHHHHHHcC
Confidence 99555321100002333321 233334444456887766654 48888888888888877543
No 417
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=87.39 E-value=0.48 Score=47.31 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=57.7
Q ss_pred CCCCCCeEeeccCC--CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecC-CCCCcccc---CCC
Q 010971 175 APQEKERVIDMAAA--PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYD-GNELPKVL---GLN 248 (496)
Q Consensus 175 ~~~~g~~VLDmcAg--pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D-~~~~~~~~---~~~ 248 (496)
.+++|++||-.+|+ .|..+..++..++ ..|+++|.++.+++.++ .+|...+ +... ...+.... ..+
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~~~~~~----~~g~~~~--~d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGKEELFR----SIGGEVF--IDFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTHHHHHH----HTTCCEE--EETTTCSCHHHHHHHHHTS
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHH----HcCCceE--EecCccHhHHHHHHHHhCC
Confidence 57899999999973 3333344444332 48999999988876553 4676532 2221 22221111 012
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.+|+|+.. +|. ...+..+++++ ++||+||...
T Consensus 238 ~~D~vi~~---~g~-------------------------~~~~~~~~~~l----~~~G~iv~~g 269 (347)
T 2hcy_A 238 GAHGVINV---SVS-------------------------EAAIEASTRYV----RANGTTVLVG 269 (347)
T ss_dssp CEEEEEEC---SSC-------------------------HHHHHHHTTSE----EEEEEEEECC
T ss_pred CCCEEEEC---CCc-------------------------HHHHHHHHHHH----hcCCEEEEEe
Confidence 79998763 331 01366677776 9999987643
No 418
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.38 E-value=2.7 Score=39.82 Aligned_cols=81 Identities=14% Similarity=0.160 Sum_probs=56.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc-------CCCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL-------GLNT 249 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~-------~~~~ 249 (496)
.|.+||=.| |+||.+.+++..+-. ...|+.+|.+..+++.+...+...|. ++.++..|..+..... ..+.
T Consensus 6 ~~k~vlVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIG-AGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEEC-CSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 355666555 557788887776543 34899999999999999998888764 6778888987643211 0147
Q ss_pred cCEEEECCCCC
Q 010971 250 VDRVLLDAPCS 260 (496)
Q Consensus 250 fD~VLlDaPCS 260 (496)
.|.++..|-..
T Consensus 84 id~lv~nAg~~ 94 (252)
T 3h7a_A 84 LEVTIFNVGAN 94 (252)
T ss_dssp EEEEEECCCCC
T ss_pred ceEEEECCCcC
Confidence 89999876443
No 419
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=87.36 E-value=5.2 Score=37.61 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=52.9
Q ss_pred CeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCCCc
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNTV 250 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~~f 250 (496)
.+||=. -|+||.+.+++..+.. ...|++++.+..++..+.+.+...|. ++.++..|..+.... + ..+.+
T Consensus 3 k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVT-GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEE-CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 345544 4667888888876543 34899999999998888877776654 466777888764221 1 12479
Q ss_pred CEEEECCC
Q 010971 251 DRVLLDAP 258 (496)
Q Consensus 251 D~VLlDaP 258 (496)
|.|+..|-
T Consensus 81 d~lv~nAg 88 (256)
T 1geg_A 81 DVIVNNAG 88 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998764
No 420
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=87.26 E-value=6.5 Score=37.64 Aligned_cols=80 Identities=14% Similarity=0.114 Sum_probs=55.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTG-LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g-~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |+||.+.+++..+...| .|++++.++..+..+.+.+...+. ++.++..|..+..... ..+
T Consensus 43 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 356677555 56888888887765444 788899899888888777766554 4667778887642211 124
Q ss_pred CcCEEEECCCC
Q 010971 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~fD~VLlDaPC 259 (496)
.+|.|+..|--
T Consensus 121 ~id~li~~Ag~ 131 (285)
T 2c07_A 121 NVDILVNNAGI 131 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999986643
No 421
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.19 E-value=0.2 Score=50.44 Aligned_cols=68 Identities=15% Similarity=0.062 Sum_probs=40.7
Q ss_pred EEEE-ecCCCCCccccCCCCcCEEEECCCCCCC-CcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEE
Q 010971 231 TIVC-NYDGNELPKVLGLNTVDRVLLDAPCSGT-GVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYI 308 (496)
Q Consensus 231 v~v~-~~D~~~~~~~~~~~~fD~VLlDaPCSg~-G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~L 308 (496)
..++ ++|+..+...++.++||+|++|||+... +.+ .. ..........+|..+.++| +|||.|
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~--------~~----~~~~~~~~~~~l~~~~rvL----k~~G~i 102 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADW--------DD----HMDYIGWAKRWLAEAERVL----SPTGSI 102 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGG--------GT----CSSHHHHHHHHHHHHHHHE----EEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCc--------cC----HHHHHHHHHHHHHHHHHHc----CCCeEE
Confidence 4566 8998765444555789999999998432 111 10 0111122344566666665 999998
Q ss_pred EEEeCCC
Q 010971 309 VYSTCSI 315 (496)
Q Consensus 309 VYSTCSi 315 (496)
+.. |+.
T Consensus 103 ~i~-~~~ 108 (319)
T 1eg2_A 103 AIF-GGL 108 (319)
T ss_dssp EEE-ECS
T ss_pred EEE-cCc
Confidence 765 443
No 422
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=87.11 E-value=5.5 Score=38.27 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=54.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHc----CCCeEEEEecCCCCCccc---cC---
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRM----GVTNTIVCNYDGNELPKV---LG--- 246 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~----g~~nv~v~~~D~~~~~~~---~~--- 246 (496)
.|.+||=.| |+||.+.+++..+. ....|++++.+..++..+...+... .-.++.++..|..+.... +.
T Consensus 17 ~~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTG-GATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 366777555 56888888887653 3348999999999988888777652 123577888898764221 10
Q ss_pred --CCCcCEEEECCC
Q 010971 247 --LNTVDRVLLDAP 258 (496)
Q Consensus 247 --~~~fD~VLlDaP 258 (496)
.+.+|.|+..|-
T Consensus 96 ~~~g~id~li~~Ag 109 (303)
T 1yxm_A 96 DTFGKINFLVNNGG 109 (303)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 146999998664
No 423
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=87.04 E-value=6.5 Score=37.71 Aligned_cols=79 Identities=13% Similarity=0.067 Sum_probs=54.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHc-CCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~-g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |+||.+.+++..+.. ...|++++.+..++..+...+... +. ++.++..|..+..... ..
T Consensus 25 ~~k~vlITG-asggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITG-GGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 356677555 568888888876543 348999999999888877777654 43 5777888987642110 12
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+.+|.|+..|-
T Consensus 103 g~id~li~~Ag 113 (302)
T 1w6u_A 103 GHPNIVINNAA 113 (302)
T ss_dssp CSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899998664
No 424
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=86.99 E-value=2.7 Score=40.45 Aligned_cols=80 Identities=14% Similarity=0.156 Sum_probs=56.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.++.+..+++.+...+...|. ++.++..|..+..... ..+
T Consensus 31 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITG-ASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 466777555 557888887776543 34899999999999998888887764 4667778887643211 114
Q ss_pred CcCEEEECCCC
Q 010971 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~fD~VLlDaPC 259 (496)
..|.++..|-.
T Consensus 109 ~iD~lvnnAg~ 119 (276)
T 3r1i_A 109 GIDIAVCNAGI 119 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987643
No 425
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=86.79 E-value=6.3 Score=36.37 Aligned_cols=78 Identities=18% Similarity=0.193 Sum_probs=52.5
Q ss_pred CeEeeccCCCchHHHHHHHHcCCC-cEEEE-EeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCCC
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKNT-GLIYA-NEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNT 249 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A-~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~~ 249 (496)
.+|| +.-|+|+.+.+++..+-.. ..|++ .+.+...+..+...+...+. ++.++..|..+.... + ..+.
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3455 4456788898888765433 47777 48898888888777776654 577778888764321 1 1247
Q ss_pred cCEEEECCCC
Q 010971 250 VDRVLLDAPC 259 (496)
Q Consensus 250 fD~VLlDaPC 259 (496)
+|.|+..|-.
T Consensus 80 id~li~~Ag~ 89 (244)
T 1edo_A 80 IDVVVNNAGI 89 (244)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999986643
No 426
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=86.64 E-value=2.1 Score=42.91 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=58.5
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc----cccCCC
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP----KVLGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~----~~~~~~ 248 (496)
..+++|++||-.+|+ |+.+..+++++.. ...|++.+.++.+++.+ +.+|...+ +..+-..+. ......
T Consensus 166 ~~~~~g~~vlV~Gas-ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~~--~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 166 ACVKAGESVLVHGAS-GGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHEV--FNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp SCCCTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE--EETTSTTHHHHHHHHHCTT
T ss_pred hCCCCcCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHcCCCEE--EeCCCchHHHHHHHHcCCC
Confidence 357899999988862 4444444433321 24899999999988754 45676533 232222221 111224
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.+|+|+-- +|. ..+..+++++ ++||++|...
T Consensus 239 ~~D~vi~~---~G~--------------------------~~~~~~~~~l----~~~G~iv~~g 269 (351)
T 1yb5_A 239 GIDIIIEM---LAN--------------------------VNLSKDLSLL----SHGGRVIVVG 269 (351)
T ss_dssp CEEEEEES---CHH--------------------------HHHHHHHHHE----EEEEEEEECC
T ss_pred CcEEEEEC---CCh--------------------------HHHHHHHHhc----cCCCEEEEEe
Confidence 79998752 220 1245667776 9999988644
No 427
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.62 E-value=4 Score=39.06 Aligned_cols=81 Identities=15% Similarity=0.140 Sum_probs=55.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCC--eEEEEecCCCCCccc---c-----C
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVT--NTIVCNYDGNELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~--nv~v~~~D~~~~~~~---~-----~ 246 (496)
.|.+||=.| |.||.+.+++..+-. ...|++++.+..++..+.+.+...|.. ++.++..|..+.... + .
T Consensus 5 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITG-SSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 355666555 567788887775543 348999999999998888777766542 577788898764211 1 0
Q ss_pred CCCcCEEEECCCC
Q 010971 247 LNTVDRVLLDAPC 259 (496)
Q Consensus 247 ~~~fD~VLlDaPC 259 (496)
.+.+|.|+..|-.
T Consensus 84 ~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 84 FGKIDVLVNNAGA 96 (280)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1478999987643
No 428
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=86.55 E-value=1.9 Score=43.08 Aligned_cols=99 Identities=13% Similarity=0.093 Sum_probs=59.4
Q ss_pred cCCCCC--CeEeeccCCCchHHHHHHHHcCC-Cc-EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc---C
Q 010971 174 LAPQEK--ERVIDMAAAPGGKTTYIAALMKN-TG-LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL---G 246 (496)
Q Consensus 174 L~~~~g--~~VLDmcAgpGgKT~~lA~l~~~-~g-~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~---~ 246 (496)
..+++| ++||-.|| .|+.+..+++++.. .. .|+++|.++.+++.+.+ .+|...+ +..+-..+.... .
T Consensus 154 ~~~~~g~~~~vlI~Ga-sggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~---~~g~~~~--~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGA-AGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS---ELGFDAA--INYKKDNVAEQLRESC 227 (357)
T ss_dssp SCCCTTSCCEEEESST-TBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH---TSCCSEE--EETTTSCHHHHHHHHC
T ss_pred cCCCCCCccEEEEECC-CcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH---HcCCceE--EecCchHHHHHHHHhc
Confidence 467889 99998876 35555554444332 23 89999999988876643 2676532 232222221111 1
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.+.+|+|+- |+|. ..+..+++++ ++||++|..
T Consensus 228 ~~~~d~vi~---~~G~--------------------------~~~~~~~~~l----~~~G~iv~~ 259 (357)
T 2zb4_A 228 PAGVDVYFD---NVGG--------------------------NISDTVISQM----NENSHIILC 259 (357)
T ss_dssp TTCEEEEEE---SCCH--------------------------HHHHHHHHTE----EEEEEEEEC
T ss_pred CCCCCEEEE---CCCH--------------------------HHHHHHHHHh----ccCcEEEEE
Confidence 126999876 3331 1356777876 999998864
No 429
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=86.49 E-value=3.9 Score=38.09 Aligned_cols=79 Identities=13% Similarity=0.073 Sum_probs=52.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEecCCCCCcccc---C----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNT-IVCNYDGNELPKVL---G----LN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv-~v~~~D~~~~~~~~---~----~~ 248 (496)
.|.+||=.| |+|+.+.+++..+... ..|++++.+...++.+.+.+ +. ++ .++..|..+..... . .+
T Consensus 10 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAAVTG-AGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GA-AVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cc-cceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 356777554 5688888888765433 48999999998887766554 32 34 67788887643211 0 14
Q ss_pred CcCEEEECCCCCC
Q 010971 249 TVDRVLLDAPCSG 261 (496)
Q Consensus 249 ~fD~VLlDaPCSg 261 (496)
.+|.|+..|-...
T Consensus 85 ~id~li~~Ag~~~ 97 (254)
T 2wsb_A 85 PVSILVNSAGIAR 97 (254)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCccCC
Confidence 7899999775443
No 430
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=86.44 E-value=4.5 Score=38.77 Aligned_cols=78 Identities=15% Similarity=0.209 Sum_probs=54.7
Q ss_pred CCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~~ 249 (496)
|.+||=.| |.||.+.+++..+. ....|+.++.+..+++.+...+...|. .+.++..|..+..... ..+.
T Consensus 4 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVILITG-ASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeC-CccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45666555 55778888877553 335899999999999999888887764 5667778887642211 1157
Q ss_pred cCEEEECCC
Q 010971 250 VDRVLLDAP 258 (496)
Q Consensus 250 fD~VLlDaP 258 (496)
.|.++..|-
T Consensus 82 iD~lVnnAG 90 (264)
T 3tfo_A 82 IDVLVNNAG 90 (264)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999998664
No 431
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=86.40 E-value=4.4 Score=38.80 Aligned_cols=127 Identities=15% Similarity=0.083 Sum_probs=74.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeC-------------CHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-------------KASRLKSLTANLHRMGVTNTIVCNYDGNELPK 243 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~-------------s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~ 243 (496)
.|.+||=.| |.||.+.+++..+-. ...|+++|. +..+++.+...+...|. ++.++..|..+...
T Consensus 14 ~gk~~lVTG-as~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFITG-AARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHH
Confidence 466777555 557778887775533 348999998 78888888888877764 46677788876422
Q ss_pred cc--------CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 244 VL--------GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 244 ~~--------~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l----~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
.. ..+..|.++..|--...+. ....+.++.... ..-...++..++..+... ..+|.||+.
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~-------~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~g~iv~i 163 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGR-------VWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEA-GNGGSIVVV 163 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBC-------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CSCEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCC-------cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCCEEEEE
Confidence 11 1147999998664332221 122344443322 122233455555543110 237888886
Q ss_pred eCC
Q 010971 312 TCS 314 (496)
Q Consensus 312 TCS 314 (496)
+..
T Consensus 164 sS~ 166 (280)
T 3pgx_A 164 SSS 166 (280)
T ss_dssp CCG
T ss_pred cch
Confidence 543
No 432
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=86.33 E-value=2.1 Score=39.97 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=54.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCC-HHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMK-ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s-~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~ 247 (496)
.|.+||=.| |+|+.+.+++..+... ..|++++.+ +..+..+...+...+. ++.++..|..+.... + ..
T Consensus 6 ~~k~vlVTG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITG-SSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG-DAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 356777544 5688888888765433 489999988 7778777777766553 577788898764321 1 01
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+.+|.|+..|-
T Consensus 84 g~id~vi~~Ag 94 (258)
T 3afn_B 84 GGIDVLINNAG 94 (258)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37999998664
No 433
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=86.27 E-value=6.6 Score=36.63 Aligned_cols=120 Identities=14% Similarity=0.036 Sum_probs=68.4
Q ss_pred CCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNT 249 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~~ 249 (496)
+.+||=.| |+||.+.+++..+. ....|++++.+..+++.+...+. . ++.++..|..+..... ..+.
T Consensus 3 ~k~vlVTG-as~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 3 LGHIIVTG-AGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---N-AVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---G-GEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---C-CceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 34566444 56778888877553 33589999999999888777662 2 4778888987642211 1147
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l----~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.|.++..|-.+..+-+ ...+.++.... ..-...++..++..+ .+.+|.||+.+.
T Consensus 78 id~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~~iv~isS 135 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPV-------GVYTAEQIRRVMESNLVSTILVAQQTVRLI---GERGGVLANVLS 135 (235)
T ss_dssp CSEEEEECCCC-------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTCEEEEEECC
T ss_pred CcEEEECCCCCCCCCh-------HhCCHHHHHHHHHHHhHHHHHHHHHHHHHH---HHcCCEEEEEeC
Confidence 8999986643222211 12333433322 222334455555554 255677776543
No 434
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=86.24 E-value=5.5 Score=38.59 Aligned_cols=125 Identities=13% Similarity=0.079 Sum_probs=72.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCC--HHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------C
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMK--ASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------G 246 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s--~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~ 246 (496)
.|.+||=.| |.||.+.+++..+-.. ..|+.++.+ ...++.+...+...|. ++.++..|..+..... .
T Consensus 48 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTG-GDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 356777555 5678888888765433 478888876 4567777777777764 5677788887642210 1
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+.+|.++..|--.. ..+. ....+.++..... .-...++..++.. ++.+|.||+.+..
T Consensus 126 ~g~iD~lv~nAg~~~-----~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 126 LGGLDILALVAGKQT-----AIPE-IKDLTSEQFQQTFAVNVFALFWITQEAIPL----LPKGASIITTSSI 187 (294)
T ss_dssp HTCCCEEEECCCCCC-----CCSS-GGGCCHHHHHHHHHHHTHHHHHHHHHHGGG----CCTTCEEEEECCG
T ss_pred cCCCCEEEECCCCcC-----CCCC-cccCCHHHHHHHHHHHhHHHHHHHHHHHHH----hhcCCEEEEECCh
Confidence 157899998663221 1111 1123344333222 2223345555554 4778998886543
No 435
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.23 E-value=8.5 Score=36.56 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=55.0
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCC------------HHHHHHHHHHHHHcCCCeEEEEecCCCCCccc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~ 244 (496)
.|.+||=.| |+||.+.+++..+- ....|+++|.+ ...+..+...+...|. ++.++..|..+....
T Consensus 12 ~gk~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITG-AARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHH
Confidence 466777555 56778888777654 33489999987 8888888888877764 577888898764321
Q ss_pred c--------CCCCcCEEEECCC
Q 010971 245 L--------GLNTVDRVLLDAP 258 (496)
Q Consensus 245 ~--------~~~~fD~VLlDaP 258 (496)
. ..+..|.++..|-
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEECCC
Confidence 1 1147999998663
No 436
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=86.22 E-value=4.5 Score=38.29 Aligned_cols=79 Identities=16% Similarity=0.136 Sum_probs=54.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=. -|+||.+.+++..+-. ...|+.++.+..++..+...+...|. ++.++..|..+..... ..+
T Consensus 6 ~~k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVT-GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 35667744 4567888888876543 34899999999998888877776654 4677788887642210 014
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 84 ~id~lv~nAg 93 (262)
T 1zem_A 84 KIDFLFNNAG 93 (262)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998764
No 437
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.04 E-value=0.77 Score=45.36 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=58.2
Q ss_pred CCCCCC-eEeeccC--CCchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEe-cCCCCCccccCCCCc
Q 010971 175 APQEKE-RVIDMAA--APGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCN-YDGNELPKVLGLNTV 250 (496)
Q Consensus 175 ~~~~g~-~VLDmcA--gpGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~-~D~~~~~~~~~~~~f 250 (496)
.+++|+ +||-.+| |-|..++++|..++ ..|++.+.++.+++.++ .+|.+.+.-.. .|...+.. .....|
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~----~lGa~~v~~~~~~~~~~~~~-~~~~~~ 218 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLK----QLGASEVISREDVYDGTLKA-LSKQQW 218 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHH----HHTCSEEEEHHHHCSSCCCS-SCCCCE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcEEEECCCchHHHHHH-hhcCCc
Confidence 577886 8998886 23444455666554 47999999988887664 47876542111 11111111 112469
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|+|+- |+|. ..+..+++++ ++||++|..
T Consensus 219 d~vid---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 246 (330)
T 1tt7_A 219 QGAVD---PVGG--------------------------KQLASLLSKI----QYGGSVAVS 246 (330)
T ss_dssp EEEEE---SCCT--------------------------HHHHHHHTTE----EEEEEEEEC
T ss_pred cEEEE---CCcH--------------------------HHHHHHHHhh----cCCCEEEEE
Confidence 98875 3331 1256677776 999998764
No 438
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.96 E-value=4.3 Score=37.48 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=48.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEecCCC-CCccccCCCCcCEEE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNT-IVCNYDGN-ELPKVLGLNTVDRVL 254 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv-~v~~~D~~-~~~~~~~~~~fD~VL 254 (496)
.|.+||=. -|+|+.+.+++..+-.. ..|++++.++.++..+.. . ++ .++..|.. .+...+ ..+|.|+
T Consensus 20 ~~~~ilVt-GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~~~~~~~~--~~~D~vi 89 (236)
T 3e8x_A 20 QGMRVLVV-GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLEEDFSHAF--ASIDAVV 89 (236)
T ss_dssp -CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTTSCCGGGG--TTCSEEE
T ss_pred CCCeEEEE-CCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccHHHHHHHH--cCCCEEE
Confidence 36778744 46788998888765433 489999999888765543 2 35 66777875 333334 5799999
Q ss_pred ECCC
Q 010971 255 LDAP 258 (496)
Q Consensus 255 lDaP 258 (496)
..+.
T Consensus 90 ~~ag 93 (236)
T 3e8x_A 90 FAAG 93 (236)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8654
No 439
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=85.91 E-value=3 Score=40.96 Aligned_cols=94 Identities=21% Similarity=0.247 Sum_probs=57.4
Q ss_pred cCCCCCCeEeecc-CC-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCC-CccccCCCCc
Q 010971 174 LAPQEKERVIDMA-AA-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNE-LPKVLGLNTV 250 (496)
Q Consensus 174 L~~~~g~~VLDmc-Ag-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~-~~~~~~~~~f 250 (496)
..+++|++||=.+ +| -|..++++|..++ ..|++.+ +..+++ .++++|.+.+ ++.+... +.... ..|
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~----~~~~lGa~~~--i~~~~~~~~~~~~--~g~ 216 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHA----FLKALGAEQC--INYHEEDFLLAIS--TPV 216 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHH----HHHHHTCSEE--EETTTSCHHHHCC--SCE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHH----HHHHcCCCEE--EeCCCcchhhhhc--cCC
Confidence 4688999999775 33 2445556666553 3788887 555544 4556888753 3333333 33333 579
Q ss_pred CEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 251 DRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 251 D~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
|+||- |+|. ..+..+++++ ++||++|..
T Consensus 217 D~v~d---~~g~--------------------------~~~~~~~~~l----~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVID---LVGG--------------------------DVGIQSIDCL----KETGCIVSV 244 (321)
T ss_dssp EEEEE---SSCH--------------------------HHHHHHGGGE----EEEEEEEEC
T ss_pred CEEEE---CCCc--------------------------HHHHHHHHhc----cCCCEEEEe
Confidence 99875 4432 1135667776 999999853
No 440
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=85.91 E-value=16 Score=35.09 Aligned_cols=63 Identities=16% Similarity=0.095 Sum_probs=44.9
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEe-CCHHHHHHHHHHHH-HcCCCeEEEEecCCCCCc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANE-MKASRLKSLTANLH-RMGVTNTIVCNYDGNELP 242 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D-~s~~rl~~l~~nl~-r~g~~nv~v~~~D~~~~~ 242 (496)
.|.+||=.| |.||.+.+++..+- ....|+.++ .+..++..+.+.+. ..| .++.++..|..+..
T Consensus 8 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTG-AAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence 355677555 55778888887653 334899999 99999888887776 445 35777788887654
No 441
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=85.89 E-value=6.8 Score=37.66 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=73.3
Q ss_pred CCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
|.+||=.| |.||.+.+++..+-. ...|+.+|. +...++.+...+....-..+.++..|..+..... ..+
T Consensus 25 ~k~~lVTG-as~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 25 TKTAVITG-STSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 56677555 567788888776533 348999998 7888888888777664456788888987642211 125
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l----~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.+|.|+..|--+..+.+ ...+.++.... ..-...++..++..+.. +.+|.||+.+.
T Consensus 104 ~iD~lv~nAg~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~iv~isS 163 (281)
T 3v2h_A 104 GADILVNNAGVQFVEKI-------EDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKK--KGWGRIINIAS 163 (281)
T ss_dssp SCSEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECC
T ss_pred CCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEECC
Confidence 79999987643333222 12233333221 12223345555544311 24578887543
No 442
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.75 E-value=7.6 Score=37.15 Aligned_cols=124 Identities=14% Similarity=0.167 Sum_probs=73.9
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCc-EEEEEe-CCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTG-LIYANE-MKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g-~V~A~D-~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~ 247 (496)
.|.+||=.|+ .||.+.+++..+-..| .|+.++ .+..+++.+...+...|. .+.++..|..+.... + ..
T Consensus 30 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGG-SRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4667776654 5778888777654333 677775 456788888888887765 466778888764321 1 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+..|.++..|-....+.+ ...+.++..... .-...++..++..+ +.+|.||+.+.+
T Consensus 108 g~iD~lvnnAg~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m----~~~g~iv~isS~ 167 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPL-------EETTVADFDEVMAVNFRAPFVAIRSASRHL----GDGGRIITIGSN 167 (271)
T ss_dssp SCCCEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHC----CTTCEEEEECCG
T ss_pred CCCcEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hcCCEEEEEeCh
Confidence 479999987643322211 223444433322 22233555555554 778998887654
No 443
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=85.67 E-value=4.4 Score=38.84 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=55.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+- ....|++++.+...++.+...+...|.. +.++..|..+..... ..+
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 466677555 66778888876553 3348999999999999999888887753 556667877642211 114
Q ss_pred CcCEEEECCCC
Q 010971 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~fD~VLlDaPC 259 (496)
..|.++..|--
T Consensus 105 ~iD~lvnnAg~ 115 (270)
T 3ftp_A 105 ALNVLVNNAGI 115 (270)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987643
No 444
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=85.64 E-value=1.2 Score=45.97 Aligned_cols=52 Identities=13% Similarity=0.076 Sum_probs=35.3
Q ss_pred cCCCCCCeEeeccC-C-CchHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHcCCCeE
Q 010971 174 LAPQEKERVIDMAA-A-PGGKTTYIAALMKNTGLIYANEMKASRLKSLTANLHRMGVTNT 231 (496)
Q Consensus 174 L~~~~g~~VLDmcA-g-pGgKT~~lA~l~~~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv 231 (496)
..+++|++||=.+| | -|..+++++..++ ..|++++.++.+++.+ +.+|...+
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~~~~~~~~~----~~lGa~~~ 269 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVSSAQKEAAV----RALGCDLV 269 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHH----HHTTCCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHH----HhcCCCEE
Confidence 45789999998776 2 2333444454442 4788999999998876 45787654
No 445
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=85.63 E-value=6.1 Score=37.16 Aligned_cols=80 Identities=11% Similarity=0.051 Sum_probs=54.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCC--CCCccc---c-----C
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDG--NELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~--~~~~~~---~-----~ 246 (496)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+..++..+...+...+...+.++..|. .+.... . .
T Consensus 11 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 11 NDRIILVTG-ASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 356677555 55778887777553 3358999999999999988888776655666777787 443111 0 1
Q ss_pred CCCcCEEEECCC
Q 010971 247 LNTVDRVLLDAP 258 (496)
Q Consensus 247 ~~~fD~VLlDaP 258 (496)
.+..|.++..|-
T Consensus 90 ~g~id~lv~nAg 101 (252)
T 3f1l_A 90 YPRLDGVLHNAG 101 (252)
T ss_dssp CSCCSEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 257999998764
No 446
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=85.51 E-value=6.3 Score=36.43 Aligned_cols=78 Identities=19% Similarity=0.230 Sum_probs=51.6
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCC-cEEEEE-eCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~-D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
|.+||=.| |+|+.+.+++..+... ..|+++ +.++..+..+...+...+. ++.++..|..+.... + ..+
T Consensus 5 ~~~vlItG-asggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 5 GKTAIVTG-SSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CcEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 56677554 5688888888765433 478888 6677777777777766654 577788888764321 1 013
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 83 ~~d~vi~~Ag 92 (247)
T 2hq1_A 83 RIDILVNNAG 92 (247)
T ss_dssp CCCEEEECC-
T ss_pred CCCEEEECCC
Confidence 7899998664
No 447
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=85.45 E-value=5.4 Score=37.62 Aligned_cols=78 Identities=12% Similarity=0.092 Sum_probs=50.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.+.+||=.| |+||.+.+++..+- ....|++++.+......+...+... .++.++..|..+.... + ..+
T Consensus 15 ~~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 15 QDKVAIITG-GAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--DVISFVHCDVTKDEDVRNLVDTTIAKHG 91 (278)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 466777555 57888888887553 3348999999988776655444211 2577888898764321 1 014
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 92 ~id~li~~Ag 101 (278)
T 2bgk_A 92 KLDIMFGNVG 101 (278)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7899998653
No 448
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=85.28 E-value=2.7 Score=39.71 Aligned_cols=80 Identities=21% Similarity=0.130 Sum_probs=55.5
Q ss_pred CCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHc--CCCeEEEEecCCCCCcccc--------CC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRM--GVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~--g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
|.+||=.| |+||.+.+++..+-. ...|+.++.+..+++.+.+.+... +..++.++..|..+..... ..
T Consensus 7 ~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 7 KGLAIITG-ASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 55666555 557778777765532 348999999999999998888776 3356778888987743211 11
Q ss_pred CCcCEEEECCCC
Q 010971 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~fD~VLlDaPC 259 (496)
+..|.++..|--
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578999987643
No 449
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.18 E-value=4.5 Score=38.82 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=56.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+..++..+.+.+...|. ++.++..|..+..... ..+
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 466777555 56778888877653 334899999999999999888887764 4677788887643211 124
Q ss_pred CcCEEEECCCC
Q 010971 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~fD~VLlDaPC 259 (496)
..|.|+..|-.
T Consensus 103 ~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 DVDILVNNAGI 113 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987643
No 450
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.13 E-value=0.56 Score=46.94 Aligned_cols=96 Identities=17% Similarity=0.204 Sum_probs=52.9
Q ss_pred cCCCCCCeEeeccCCCchHHHHHHHHcCC--CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---cCCC
Q 010971 174 LAPQEKERVIDMAAAPGGKTTYIAALMKN--TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LGLN 248 (496)
Q Consensus 174 L~~~~g~~VLDmcAgpGgKT~~lA~l~~~--~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~~~~ 248 (496)
..+++|++||=.+|+ |+.++.+.++... ...|++.+ +..+.+.+ . +|...+. +.+ ..+... ....
T Consensus 138 ~~~~~g~~VlV~Ga~-G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~----~-~ga~~~~--~~~-~~~~~~~~~~~~~ 207 (349)
T 4a27_A 138 ANLREGMSVLVHSAG-GGVGQAVAQLCSTVPNVTVFGTA-STFKHEAI----K-DSVTHLF--DRN-ADYVQEVKRISAE 207 (349)
T ss_dssp SCCCTTCEEEESSTT-SHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHH----G-GGSSEEE--ETT-SCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEEcCC-cHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHH----H-cCCcEEE--cCC-ccHHHHHHHhcCC
Confidence 357899999988773 4445444444332 34788888 55555443 2 6776543 222 222111 1235
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEEe
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYST 312 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYST 312 (496)
.||+||- |+|.. .+..+++++ ++||++|...
T Consensus 208 g~Dvv~d---~~g~~--------------------------~~~~~~~~l----~~~G~~v~~G 238 (349)
T 4a27_A 208 GVDIVLD---CLCGD--------------------------NTGKGLSLL----KPLGTYILYG 238 (349)
T ss_dssp CEEEEEE---ECC---------------------------------CTTE----EEEEEEEEEC
T ss_pred CceEEEE---CCCch--------------------------hHHHHHHHh----hcCCEEEEEC
Confidence 7998875 44431 134566666 9999998653
No 451
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.02 E-value=6.8 Score=37.55 Aligned_cols=82 Identities=12% Similarity=0.118 Sum_probs=55.9
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+- ....|++++.+..++..+.+.+...|. ++.++..|..+..... ..+
T Consensus 23 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTG-VSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356677555 55778887776553 335899999999999998888877664 4777788887643211 114
Q ss_pred CcCEEEECCCCCC
Q 010971 249 TVDRVLLDAPCSG 261 (496)
Q Consensus 249 ~fD~VLlDaPCSg 261 (496)
..|.|+..|-...
T Consensus 101 ~id~lv~nAg~~~ 113 (279)
T 3sju_A 101 PIGILVNSAGRNG 113 (279)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCcEEEECCCCCC
Confidence 7899998775433
No 452
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=84.91 E-value=8.4 Score=35.45 Aligned_cols=79 Identities=15% Similarity=0.141 Sum_probs=52.6
Q ss_pred eEeeccCCCchHHHHHHHHcCCCc-EEEEE-eCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCCCc
Q 010971 181 RVIDMAAAPGGKTTYIAALMKNTG-LIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLNTV 250 (496)
Q Consensus 181 ~VLDmcAgpGgKT~~lA~l~~~~g-~V~A~-D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~~f 250 (496)
+||= .-|+|+.+.+++..+...| .|+++ +.+...+..+...+...|.....++..|..+..... ..+.+
T Consensus 3 ~vlI-TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 2ph3_A 3 KALI-TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL 81 (245)
T ss_dssp EEEE-TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred EEEE-eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence 4554 4467889998887665444 78887 889998888877777766543333778887643211 01478
Q ss_pred CEEEECCCCC
Q 010971 251 DRVLLDAPCS 260 (496)
Q Consensus 251 D~VLlDaPCS 260 (496)
|.|+..|-..
T Consensus 82 d~li~~Ag~~ 91 (245)
T 2ph3_A 82 DTLVNNAGIT 91 (245)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999876433
No 453
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=84.89 E-value=6.8 Score=37.82 Aligned_cols=126 Identities=17% Similarity=0.126 Sum_probs=75.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.++|=-|+ .+|.+..+|..+- ....|+.+|.+.++++.+.+.+...|. ++..+..|..+..... ..+
T Consensus 8 ~gKvalVTGa-s~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGS-ARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 4666775554 4667777776554 345899999999999999999988875 4667778887642211 236
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHH----HHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYL----QKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~l----Q~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
+.|.++.+|- +....| ....+.++....... -..+.+.++..+... ..||.||..+.
T Consensus 86 ~iDiLVNNAG-----~~~~~~--~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~~G~IVnisS 146 (255)
T 4g81_D 86 HVDILINNAG-----IQYRKP--MVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR-NSGGKIINIGS 146 (255)
T ss_dssp CCCEEEECCC-----CCCCCC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEEECC
T ss_pred CCcEEEECCC-----CCCCCC--hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-cCCCEEEEEee
Confidence 8999988763 322222 223444444433221 122334444433100 35688887543
No 454
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=84.81 E-value=6.1 Score=37.29 Aligned_cols=79 Identities=10% Similarity=0.151 Sum_probs=54.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|.+...+..+...+...+. ++.++..|..+..... ..+
T Consensus 5 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITG-GSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 356677555 567788888776533 34899999999999888887766553 5777888987642211 114
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
..|.++..|-
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998664
No 455
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=84.79 E-value=7 Score=36.87 Aligned_cols=78 Identities=12% Similarity=0.149 Sum_probs=52.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|.+..++..+...+ + .++.++..|..+.... + ..+
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 466777555 668888888876533 348999999998887766554 3 2467778888764321 1 124
Q ss_pred CcCEEEECCCCC
Q 010971 249 TVDRVLLDAPCS 260 (496)
Q Consensus 249 ~fD~VLlDaPCS 260 (496)
.+|.|+..|-.+
T Consensus 82 ~id~lv~~Ag~~ 93 (259)
T 4e6p_A 82 GLDILVNNAALF 93 (259)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 799999976543
No 456
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=84.79 E-value=15 Score=36.23 Aligned_cols=63 Identities=16% Similarity=0.095 Sum_probs=45.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEe-CCHHHHHHHHHHHH-HcCCCeEEEEecCCCCCc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANE-MKASRLKSLTANLH-RMGVTNTIVCNYDGNELP 242 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D-~s~~rl~~l~~nl~-r~g~~nv~v~~~D~~~~~ 242 (496)
.|.+||=. -|.||.+.+++..+- ....|+.++ .+..++..+...+. ..| .++.++..|..+..
T Consensus 45 ~~k~~lVT-Gas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVT-GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEET-TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCCEEEEE-CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCch
Confidence 35667644 456888888887653 335899999 99999988887776 445 35777788887654
No 457
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=84.78 E-value=5.7 Score=37.57 Aligned_cols=121 Identities=12% Similarity=0.150 Sum_probs=72.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+..+++.+.+.+ + .++.++..|..+..... ..+
T Consensus 7 ~gk~~lVTG-as~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIG-GTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 466777555 55778888777653 3348999999999888776655 3 25777888987653211 114
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHH----HHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSY----LQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~----lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+|.++..|-.+..+.+ ...+.++...... -...++..++..+ +.+|.||+.+..
T Consensus 82 ~id~lv~nAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~----~~~g~iv~isS~ 140 (255)
T 4eso_A 82 AIDLLHINAGVSELEPF-------DQVSEASYDRQFAVNTKGAFFTVQRLTPLI----REGGSIVFTSSV 140 (255)
T ss_dssp SEEEEEECCCCCCCBCG-------GGCCHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEECCG
T ss_pred CCCEEEECCCCCCCCCh-------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHH----hcCCEEEEECCh
Confidence 78999887644332221 2234444333222 2233444444443 678998886543
No 458
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.67 E-value=7.2 Score=36.83 Aligned_cols=66 Identities=14% Similarity=0.287 Sum_probs=49.6
Q ss_pred CeEeeccCCCchHHHHHHHHcCCCc-EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccccCCCCcCEEEECCC
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKNTG-LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVLGLNTVDRVLLDAP 258 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~~g-~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~~~~~fD~VLlDaP 258 (496)
.+||=.| | |..+.+++..+...| .|++++.++.....+.. .++.++..|..++. + ..+|.|+.-+.
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~--~--~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS--L--DGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC--C--TTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc--c--CCCCEEEECCC
Confidence 5788888 5 999999988764434 89999999877655432 34778888988765 3 68999998554
No 459
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=84.62 E-value=11 Score=36.06 Aligned_cols=78 Identities=14% Similarity=0.153 Sum_probs=52.0
Q ss_pred CCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCH-HHHHHHHHHHH-HcCCCeEEEEecCCCC----Cccc---c---
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKA-SRLKSLTANLH-RMGVTNTIVCNYDGNE----LPKV---L--- 245 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~-~rl~~l~~nl~-r~g~~nv~v~~~D~~~----~~~~---~--- 245 (496)
|.+||=.| |.||.+.+++..+-. ...|++++.+. .++..+...+. ..| .++.++..|..+ .... +
T Consensus 23 ~k~~lVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 23 APAAVVTG-AAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCCccCCHHHHHHHHHHH
Confidence 56676555 557788887765532 34899999987 88877777765 444 357778889887 3211 0
Q ss_pred --CCCCcCEEEECCC
Q 010971 246 --GLNTVDRVLLDAP 258 (496)
Q Consensus 246 --~~~~fD~VLlDaP 258 (496)
..+.+|.|+..|-
T Consensus 101 ~~~~g~iD~lvnnAG 115 (288)
T 2x9g_A 101 FRAFGRCDVLVNNAS 115 (288)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 0147899998764
No 460
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.54 E-value=11 Score=35.56 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=55.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|.+..+++.+...+...|. ++.++..|..+..... ..+
T Consensus 10 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISG-VGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEES-CCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEEC-CCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 466777555 456777777765533 34899999999999999988887764 5677788887643211 125
Q ss_pred CcCEEEECC
Q 010971 249 TVDRVLLDA 257 (496)
Q Consensus 249 ~fD~VLlDa 257 (496)
..|.++..|
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 799999876
No 461
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=84.42 E-value=6.1 Score=38.31 Aligned_cols=79 Identities=15% Similarity=0.116 Sum_probs=54.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |+||.+.+++..+- ....|++++.++.+++.+.+.+...|. ++.++..|..+.... + ..+
T Consensus 33 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 33 KGKIALVTG-ASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 366677555 56888888877553 334899999999998888877776664 466777888764211 1 125
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 111 ~iD~lvnnAg 120 (291)
T 3cxt_A 111 IIDILVNNAG 120 (291)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 6999998764
No 462
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=84.31 E-value=5.1 Score=38.47 Aligned_cols=78 Identities=12% Similarity=0.038 Sum_probs=53.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |+||.+.+++..+.. ...|+++|.+..++..+.+.+...| ++.++..|..+.... + ..+
T Consensus 28 ~~k~vlVTG-as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 28 AGRIALVTG-GSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 356777555 567888888776533 3489999999988887777765544 577777888764211 1 125
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 105 ~iD~lvnnAg 114 (276)
T 2b4q_A 105 RLDILVNNAG 114 (276)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998764
No 463
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=84.29 E-value=9.1 Score=36.55 Aligned_cols=79 Identities=18% Similarity=0.205 Sum_probs=54.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |+||.+.+++..+... ..|++++.++.+++.+.+.+...|. ++.++..|..+.... + ..+
T Consensus 21 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTG-ATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 356677555 5678888887765433 4899999999998888877776664 466778888764221 1 124
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 99 ~iD~lv~~Ag 108 (277)
T 2rhc_B 99 PVDVLVNNAG 108 (277)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998764
No 464
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=84.25 E-value=7.5 Score=35.80 Aligned_cols=116 Identities=16% Similarity=0.111 Sum_probs=64.8
Q ss_pred ccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c--CCCCcCEEEECCC
Q 010971 185 MAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L--GLNTVDRVLLDAP 258 (496)
Q Consensus 185 mcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~--~~~~fD~VLlDaP 258 (496)
+.-|+||.+.+++..+.. ...|+.++.+..+++.+...+ + .++.++..|..+.... + -...+|.|+..|-
T Consensus 6 VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag 81 (230)
T 3guy_A 6 ITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---S-NNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG 81 (230)
T ss_dssp EESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---S-SCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---h-hccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence 344567888888776533 347999999998887665544 2 3466677787764211 1 1134699988664
Q ss_pred CCCCCcccCCchhhccCCHHHHHH----HHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 259 CSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 259 CSg~G~i~r~p~~k~~~s~~~i~~----l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
-...+.+ ...+.++... ...-...++..++..+ .+.+|.||+.+.+
T Consensus 82 ~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~~~iv~isS~ 131 (230)
T 3guy_A 82 SGYFGLL-------QEQDPEQIQTLIENNLSSAINVLRELVKRY---KDQPVNVVMIMST 131 (230)
T ss_dssp CCCCSCG-------GGSCHHHHHHHHHHHHHHHHHHHHHHHHHH---TTSCCEEEEECCG
T ss_pred cCCCCcc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCeEEEEeec
Confidence 3222211 2233343332 2223344566666655 2446677765443
No 465
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=84.22 E-value=11 Score=36.17 Aligned_cols=125 Identities=14% Similarity=0.120 Sum_probs=69.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.+.+||=. -|+||.+.+++..+- ....|+.+|.+..+++.+...+ + .++.++..|..+..... ..+
T Consensus 27 ~~k~~lVT-Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 27 GKKIAIVT-GAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---G-DDALCVPTDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp -CCEEEET-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---T-SCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35566644 456778888777653 3348999999998887776655 3 45677888887642211 114
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.+|.++..|--+..+ .| ....+.++..... .-...++..++..+...-.++|.||+.+.
T Consensus 102 ~iD~lVnnAg~~~~~----~~--~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS 164 (272)
T 4dyv_A 102 RVDVLFNNAGTGAPA----IP--MEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGS 164 (272)
T ss_dssp CCCEEEECCCCCCCS----SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred CCCEEEECCCCCCCC----CC--hhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECc
Confidence 799999866432210 01 1123333333221 22233455555554211112688888644
No 466
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=84.16 E-value=5.9 Score=36.46 Aligned_cols=74 Identities=19% Similarity=0.173 Sum_probs=48.3
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNT 249 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~~ 249 (496)
+.+|| +.-|+|+.+.+++..+-.. ..|++++.+..++..+...+ + ++.++..|..+.... + ..+.
T Consensus 5 ~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 5 KGAVL-ITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---E--GALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---h--hceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 44566 4456788888888765433 48999999988877665443 2 566777888764221 1 0147
Q ss_pred cCEEEECCC
Q 010971 250 VDRVLLDAP 258 (496)
Q Consensus 250 fD~VLlDaP 258 (496)
+|.|+..|-
T Consensus 79 id~li~~Ag 87 (234)
T 2ehd_A 79 LSALVNNAG 87 (234)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998654
No 467
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=84.14 E-value=4.8 Score=38.54 Aligned_cols=80 Identities=13% Similarity=0.084 Sum_probs=54.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |.||.+.+++..+-.. ..|+.++.+..++..+...+....-.++.++..|..+..... ..+
T Consensus 26 ~~k~~lVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 26 RDKVAFITG-GGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 466777555 5678888888765443 489999999998888777765432235778888987642211 114
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
..|.++..|-
T Consensus 105 ~id~lv~nAg 114 (277)
T 4fc7_A 105 RIDILINCAA 114 (277)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7999998663
No 468
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=84.11 E-value=7.7 Score=36.71 Aligned_cols=79 Identities=14% Similarity=0.200 Sum_probs=54.0
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCc-EEEEE-eCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTG-LIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g-~V~A~-D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |.||.+.+++..+-..| .|+.+ +.+..++..+...+...|. ++.++..|..+..... ..
T Consensus 3 ~~k~vlVTG-as~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTG-SSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEec-CCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 355666554 56788888887654334 66665 8999999888888877764 5777788987643211 11
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+..|.++..|-
T Consensus 81 g~id~lv~nAg 91 (258)
T 3oid_A 81 GRLDVFVNNAA 91 (258)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998664
No 469
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=84.06 E-value=6.9 Score=37.27 Aligned_cols=79 Identities=10% Similarity=0.029 Sum_probs=54.8
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC-
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL- 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~- 247 (496)
.|.+||=.| |+||.+.+++..+.. ...|++++.+..+++.+.+.+...|. ++.++..|..+..... ..
T Consensus 20 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTG-GSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEC-CcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356677555 567888888776543 34899999999998888777776654 4677788887643211 11
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+.+|.++..|-
T Consensus 98 g~id~lv~nAg 108 (273)
T 1ae1_A 98 GKLNILVNNAG 108 (273)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 57899998764
No 470
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=83.93 E-value=8.5 Score=37.71 Aligned_cols=82 Identities=16% Similarity=0.148 Sum_probs=55.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCC------------HHHHHHHHHHHHHcCCCeEEEEecCCCCCccc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~ 244 (496)
.|.+||=.| |.||.+.+++..+- ....|+++|.+ ..++..+...+...|. .+.++..|..+....
T Consensus 45 ~gk~~lVTG-as~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITG-AARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH
Confidence 466677555 55778888777553 33489999886 7888888777777764 477778888764321
Q ss_pred c--------CCCCcCEEEECCCCCC
Q 010971 245 L--------GLNTVDRVLLDAPCSG 261 (496)
Q Consensus 245 ~--------~~~~fD~VLlDaPCSg 261 (496)
. ..+.+|.++..|-.+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC
Confidence 1 1147999998765443
No 471
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.89 E-value=1.4 Score=43.89 Aligned_cols=96 Identities=16% Similarity=0.107 Sum_probs=55.8
Q ss_pred CCCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc----CCCCcC
Q 010971 177 QEKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL----GLNTVD 251 (496)
Q Consensus 177 ~~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~----~~~~fD 251 (496)
++|+.++=+.+|.|+.++.++++... ...|+++|.++.+++.++ .+|...+ ++.+...+.... ....||
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~--~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DIGAAHV--LNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HHTCSEE--EETTSTTHHHHHHHHHHHHCCC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE--EECCcHHHHHHHHHHhcCCCCc
Confidence 56643333655666666554444321 148999999999987764 5787543 333333332111 113699
Q ss_pred EEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHHHHHHHHHHHhhhhcCCCCcEEEEE
Q 010971 252 RVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQKQLILAAIDMVDANSKSGGYIVYS 311 (496)
Q Consensus 252 ~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ~~LL~~A~~~l~~~lkpGG~LVYS 311 (496)
+||- |+|.. .+..+++++ ++||++|..
T Consensus 236 ~vid---~~g~~--------------------------~~~~~~~~l----~~~G~iv~~ 262 (349)
T 3pi7_A 236 IFLD---AVTGP--------------------------LASAIFNAM----PKRARWIIY 262 (349)
T ss_dssp EEEE---SSCHH--------------------------HHHHHHHHS----CTTCEEEEC
T ss_pred EEEE---CCCCh--------------------------hHHHHHhhh----cCCCEEEEE
Confidence 9875 44321 134566766 999998864
No 472
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=83.84 E-value=8.7 Score=35.83 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=53.6
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeC-CHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
|.+||=. -|+||.+.+++..+-.. ..|++++. +..+++.+.+.+...|. ++.++..|..+.... + ..+
T Consensus 4 ~k~vlVT-Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVALVT-GASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEEET-TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEE-CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5566644 46688888888765433 48889998 88888888877776654 466777888764321 1 014
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 82 ~id~lv~nAg 91 (246)
T 2uvd_A 82 QVDILVNNAG 91 (246)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998664
No 473
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=83.82 E-value=11 Score=35.09 Aligned_cols=81 Identities=12% Similarity=0.162 Sum_probs=53.8
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeC-CHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
+.+||= .-|.||.+.+++..+-.. ..|+.++. +..+++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 4 ~k~~lV-TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALV-TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEE-TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEE-ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 445664 445678888888765433 47777776 67888888888887765 4667788887643211 114
Q ss_pred CcCEEEECCCCCC
Q 010971 249 TVDRVLLDAPCSG 261 (496)
Q Consensus 249 ~fD~VLlDaPCSg 261 (496)
.+|.++..|-.+.
T Consensus 82 ~id~lv~nAg~~~ 94 (246)
T 3osu_A 82 SLDVLVNNAGITR 94 (246)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899998775433
No 474
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=83.76 E-value=6.4 Score=37.83 Aligned_cols=79 Identities=18% Similarity=0.143 Sum_probs=54.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeC-CHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEM-KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~-s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|. +...++.+...+...|. ++.++..|..+..... ..
T Consensus 28 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTG-GRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEec-CCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 466677555 557778877775533 348888885 88888888888887764 5777888987753221 11
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+..|.++..|-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 47899998763
No 475
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=83.57 E-value=4.3 Score=40.28 Aligned_cols=75 Identities=12% Similarity=0.140 Sum_probs=53.0
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-c--EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCc---cccCCCCcC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-G--LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELP---KVLGLNTVD 251 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g--~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~---~~~~~~~fD 251 (496)
.|.+|| +.-|+|+.+.+++..+-.. | .|++++.++.....+...+. -.++.++.+|.++.. ..+ ..+|
T Consensus 20 ~~k~vl-VTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~--~~~D 93 (344)
T 2gn4_A 20 DNQTIL-ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYAL--EGVD 93 (344)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHT--TTCS
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHH--hcCC
Confidence 466777 4556799999988765433 3 89999999988776665442 246788889987753 223 4799
Q ss_pred EEEECCC
Q 010971 252 RVLLDAP 258 (496)
Q Consensus 252 ~VLlDaP 258 (496)
.|+.-|.
T Consensus 94 ~Vih~Aa 100 (344)
T 2gn4_A 94 ICIHAAA 100 (344)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998654
No 476
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=83.50 E-value=7.9 Score=36.71 Aligned_cols=124 Identities=12% Similarity=0.068 Sum_probs=72.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCCc-EEEEEeC---CHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNTG-LIYANEM---KASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL-------- 245 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~g-~V~A~D~---s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~-------- 245 (496)
.|.+||=.| |.||.+.+++..+-..| .|+.++. +..+++.+...+...|. ++.++..|..+.....
T Consensus 10 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAG-GIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence 466777555 55778888887765444 7777754 45677777777766654 5777888987643211
Q ss_pred CCCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 246 GLNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 246 ~~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
..+..|.++..|-....+.+ ...+.++..... .-...++..++..+ +++|.||+.+.+
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m----~~~g~iv~isS~ 149 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPI-------VETSEAEFDAMDTINNKVAYFFIKQAAKHM----NPNGHIITIATS 149 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCG-------GGCCHHHHHHHHHHHHHHHHHHHHHHHTTE----EEEEEEEEECCC
T ss_pred HcCCCCEEEECCCCCCCCCc-------ccCCHHHHHHHHHHHhHHHHHHHHHHHHhh----cCCCEEEEEech
Confidence 11478999886643222211 223444443322 22233455555544 678999886543
No 477
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=83.49 E-value=14 Score=37.41 Aligned_cols=79 Identities=9% Similarity=0.063 Sum_probs=57.0
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCCc--EEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEecCCCCCcc---ccCCCCc
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNTG--LIYANEMKASRLKSLTANLHRMGV---TNTIVCNYDGNELPK---VLGLNTV 250 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~g--~V~A~D~s~~rl~~l~~nl~r~g~---~nv~v~~~D~~~~~~---~~~~~~f 250 (496)
+.+||=.| |+|+.+.+++..+-..| .|+++|.+...+..+...+..... .++.++.+|..+... .+....+
T Consensus 35 ~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 66777554 67999999988765545 899999999999888877765422 468888899876421 1122579
Q ss_pred CEEEECCC
Q 010971 251 DRVLLDAP 258 (496)
Q Consensus 251 D~VLlDaP 258 (496)
|.|+.-|.
T Consensus 114 D~Vih~Aa 121 (399)
T 3nzo_A 114 DYVLNLSA 121 (399)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99998554
No 478
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=83.43 E-value=8.1 Score=36.81 Aligned_cols=80 Identities=15% Similarity=0.154 Sum_probs=54.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeC-------------CHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEM-------------KASRLKSLTANLHRMGVTNTIVCNYDGNELPK 243 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~-------------s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~ 243 (496)
.|.+||=.| |.||.+.+++..+- ....|+++|. +...+..+...+...+. .+.++..|..+...
T Consensus 10 ~~k~~lVTG-as~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITG-AARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHH
Confidence 466677555 55777777776553 3348999998 78888888877777664 46777888876432
Q ss_pred cc--------CCCCcCEEEECCCC
Q 010971 244 VL--------GLNTVDRVLLDAPC 259 (496)
Q Consensus 244 ~~--------~~~~fD~VLlDaPC 259 (496)
.. ..+..|.++..|-.
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 11 11579999987643
No 479
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.28 E-value=5.1 Score=38.32 Aligned_cols=124 Identities=17% Similarity=0.134 Sum_probs=72.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEE-eCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYAN-EMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~-D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |.||.+.+++..+-.. ..|+.+ ..+...++.+...+...|. .+.++..|..+..... ..
T Consensus 26 ~~k~~lVTG-as~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTG-ASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEES-CSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 366677555 5577787777655333 366665 5677788888888877764 4667788887643211 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHH----HHHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQK----CSYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~----l~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+..|.++..|--...+.+ ...+.++... ...-...++..++..+ +.+|.||+.+.+
T Consensus 104 g~iD~lvnnAG~~~~~~~-------~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~----~~~g~iv~isS~ 163 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTI-------AETGDAVFDRVIAVNLKGTFNTLREAAQRL----RVGGRIINMSTS 163 (267)
T ss_dssp SCEEEEEECCCCCCCCCG-------GGCCHHHHHHHHHHHHHHHHHHHHHHHHHE----EEEEEEEEECCT
T ss_pred CCCCEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHHHHHHHHHHHHHHHH----hhCCeEEEEeCh
Confidence 478999986643322221 1233333332 2222334566666655 678999887643
No 480
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=83.21 E-value=8.8 Score=35.72 Aligned_cols=79 Identities=10% Similarity=0.052 Sum_probs=55.0
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---cC-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG-----LN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~~-----~~ 248 (496)
.+.+||=.| |+|+.+.+++..+. ....|++++.+..++..+.+.+...+. ++.++..|..+.... +. .+
T Consensus 12 ~~k~vlItG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTG-GAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 356777554 66888888887553 334899999999988888777776654 477788888764321 10 14
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 90 ~id~vi~~Ag 99 (260)
T 3awd_A 90 RVDILVACAG 99 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998653
No 481
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=83.18 E-value=7.9 Score=35.72 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=52.3
Q ss_pred CeEeeccCCCchHHHHHHHHcCCCc--------EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c---
Q 010971 180 ERVIDMAAAPGGKTTYIAALMKNTG--------LIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L--- 245 (496)
Q Consensus 180 ~~VLDmcAgpGgKT~~lA~l~~~~g--------~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~--- 245 (496)
.+|| +.-|+||.+.+++..+-..| .|++++.+...+..+...+...+. ++.++..|..+.... +
T Consensus 3 k~vl-ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 3 HILL-ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp EEEE-EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEE-EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCC-eeeEEEecCCCHHHHHHHHHHH
Confidence 4555 44567888888877553323 799999999998888777765543 577788898764211 1
Q ss_pred --CCCCcCEEEECCC
Q 010971 246 --GLNTVDRVLLDAP 258 (496)
Q Consensus 246 --~~~~fD~VLlDaP 258 (496)
..+.+|.|+..|-
T Consensus 81 ~~~~g~id~li~~Ag 95 (244)
T 2bd0_A 81 VERYGHIDCLVNNAG 95 (244)
T ss_dssp HHHTSCCSEEEECCC
T ss_pred HHhCCCCCEEEEcCC
Confidence 1247999998653
No 482
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=83.03 E-value=11 Score=36.14 Aligned_cols=123 Identities=14% Similarity=0.128 Sum_probs=69.7
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.+|.+..++..+... ++. .+.++..|..+.... + ..+
T Consensus 26 ~~k~vlVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 26 NQRVCIVTG-GGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGS-KAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HCT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hCC-ceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 356666555 557788888776533 34899999999887766554 343 466777888764221 1 114
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHH----HHHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKC----SYLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l----~~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+|.++..|--+..+.+. ..+.++.... ..-...++..++..+.. ..+|.||+.+..
T Consensus 101 ~iD~lv~nAg~~~~~~~~-------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~~g~iv~isS~ 161 (277)
T 4dqx_A 101 RVDVLVNNAGFGTTGNVV-------TIPEETWDRIMSVNVKGIFLCSKYVIPVMRR--NGGGSIINTTSY 161 (277)
T ss_dssp CCCEEEECCCCCCCBCTT-------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--TTCEEEEEECCG
T ss_pred CCCEEEECCCcCCCCCcc-------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCcEEEEECch
Confidence 799999876433322221 2233333321 12223345555555411 246788876543
No 483
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=82.96 E-value=7.1 Score=37.16 Aligned_cols=80 Identities=16% Similarity=0.155 Sum_probs=53.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHH-HHcCCCeEEEEecCCCCCccc---c-----CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANL-HRMGVTNTIVCNYDGNELPKV---L-----GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl-~r~g~~nv~v~~~D~~~~~~~---~-----~~ 247 (496)
.|.+||=.| |+||.+.+++..+-. ...|++++.+..++..+...+ ...|. ++.++..|..+.... + ..
T Consensus 20 ~~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTG-GSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 355666554 568888888876543 348999999999888877776 44454 466777888764211 1 01
Q ss_pred CCcCEEEECCCC
Q 010971 248 NTVDRVLLDAPC 259 (496)
Q Consensus 248 ~~fD~VLlDaPC 259 (496)
+.+|.|+..|-.
T Consensus 98 g~iD~lvnnAg~ 109 (267)
T 1vl8_A 98 GKLDTVVNAAGI 109 (267)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999986643
No 484
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=82.75 E-value=6.9 Score=38.35 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=55.0
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCC----------HHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc-
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK----------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL- 245 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s----------~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~- 245 (496)
.|.+||=.| |.||.+.+++..+- ....|+.+|.+ ..++..+...+...|. ++.++..|..+.....
T Consensus 26 ~gk~vlVTG-as~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 26 DGRVVIVTG-AGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTSHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHH
Confidence 466777555 55788888877553 33489999987 7788888888877764 5777888887643211
Q ss_pred -------CCCCcCEEEECCCC
Q 010971 246 -------GLNTVDRVLLDAPC 259 (496)
Q Consensus 246 -------~~~~fD~VLlDaPC 259 (496)
..+..|.++..|-.
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 01478999886643
No 485
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=82.72 E-value=12 Score=35.04 Aligned_cols=120 Identities=15% Similarity=0.183 Sum_probs=68.2
Q ss_pred CCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLNT 249 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~~ 249 (496)
|.+||=.| |+||.+.+++..+.. ...|+++|.+..++..+...+ + .++.++..|..+.... + ..+.
T Consensus 6 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 6 GKVALVTG-GASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G-ERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 55666554 567888888876543 348999999998887766554 3 2467778888764221 0 0146
Q ss_pred cCEEEECCCCCCCCcccCCchhhccCCHHHHHHHHHHH----HHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 250 VDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCSYLQ----KQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 250 fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~~lQ----~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
+|.|+..|-....+.+ ...+.++.......- ..+...++..+ .+.||.||+.+.
T Consensus 81 id~lv~~Ag~~~~~~~-------~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~---~~~~g~iv~isS 138 (253)
T 1hxh_A 81 LNVLVNNAGILLPGDM-------ETGRLEDFSRLLKINTESVFIGCQQGIAAM---KETGGSIINMAS 138 (253)
T ss_dssp CCEEEECCCCCCCBCT-------TTCCHHHHHHHHHHHTHHHHHHHHHHHHHH---TTTCEEEEEECC
T ss_pred CCEEEECCCCCCCCCc-------ccCCHHHHHHHHHhhcHHHHHHHHHHHHHH---HHcCCEEEEEcc
Confidence 8999986643222211 123444433322211 22344455544 244588887654
No 486
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=82.62 E-value=14 Score=35.57 Aligned_cols=125 Identities=11% Similarity=0.125 Sum_probs=71.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHH-HHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKAS-RLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~-rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |.||.+.+++..+-. ...|+.++.+.. ....+.+.+...|. ++.++..|..+..... ..
T Consensus 46 ~gk~vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITG-GDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 466777655 557788888776543 347888888765 44555555665554 5777888987642211 11
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
+.+|.++..|--.. .... ....+.++..... .-...++..++..+ +.+|.||+.+..
T Consensus 124 g~iD~lvnnAg~~~-----~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~----~~~g~iv~isS~ 184 (291)
T 3ijr_A 124 GSLNILVNNVAQQY-----PQQG-LEYITAEQLEKTFRINIFSYFHVTKAALSHL----KQGDVIINTASI 184 (291)
T ss_dssp SSCCEEEECCCCCC-----CCSS-GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC----CTTCEEEEECCT
T ss_pred CCCCEEEECCCCcC-----CCCC-cccCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hhCCEEEEEech
Confidence 47899998663221 1110 1122334333222 22334555555554 788998886543
No 487
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=82.50 E-value=9.1 Score=36.60 Aligned_cols=127 Identities=13% Similarity=0.113 Sum_probs=67.3
Q ss_pred CCCeEeeccCCC-chHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHH-HHcCCCeEEEEecCCCCCccc---c-----C
Q 010971 178 EKERVIDMAAAP-GGKTTYIAALMKN-TGLIYANEMKASRLKSLTANL-HRMGVTNTIVCNYDGNELPKV---L-----G 246 (496)
Q Consensus 178 ~g~~VLDmcAgp-GgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl-~r~g~~nv~v~~~D~~~~~~~---~-----~ 246 (496)
.|.+||=.|++. ||.+.+++..+-. ...|++++.+.. .....+.+ ...| ++.++..|..+.... + .
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467888888763 8888888876533 348889998875 22222222 2233 255677888764221 1 1
Q ss_pred CCCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 247 LNTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 247 ~~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
.+.+|.|+..|-......+. .| ....+.++..... .-...++..++..+ .+.+|+||+.+.
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~-~~--~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~---~~~~g~iv~isS 161 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFK-GG--VIDTSREGFKIAMDISVYSLIALTRELLPLM---EGRNGAIVTLSY 161 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGS-SC--GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGG---TTSCCEEEEEEC
T ss_pred cCCCCEEEECCCCCCcccCC-CC--cccCCHHHHHHHHHHhhHHHHHHHHHHHHHH---HHcCCEEEEEcc
Confidence 25789999876422110000 01 1123444333222 22233455555544 235788887654
No 488
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=82.48 E-value=6.7 Score=37.80 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=55.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.+.+||=.| |.||.+.+++..+. ....|+.+|.+..++..+...+...|. .+.++..|..+.... + ..+
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITG-AGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 466677555 55778888777553 334899999999999888888776654 467778888764211 1 115
Q ss_pred CcCEEEECCCC
Q 010971 249 TVDRVLLDAPC 259 (496)
Q Consensus 249 ~fD~VLlDaPC 259 (496)
..|.++..|--
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999987643
No 489
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=82.46 E-value=7.2 Score=36.72 Aligned_cols=78 Identities=17% Similarity=0.144 Sum_probs=53.0
Q ss_pred CCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHc-CCCeEEEEecCCCCCccc---c-----CCC
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRM-GVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~-g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
|.+||=. -|+||.+.+++..+-. ...|++++.+..++..+...+... |. ++.++..|..+.... + ..+
T Consensus 7 ~k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 7 GKVAVIT-GSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp TCEEEEE-SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEE-CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5566644 4568888888876543 348999999999888777776554 53 567778888764221 1 014
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 85 ~id~lv~~Ag 94 (263)
T 3ai3_A 85 GADILVNNAG 94 (263)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7899998664
No 490
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=82.28 E-value=8.6 Score=36.74 Aligned_cols=79 Identities=14% Similarity=0.118 Sum_probs=53.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCC----------------HHHHHHHHHHHHHcCCCeEEEEecCCCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMK----------------ASRLKSLTANLHRMGVTNTIVCNYDGNE 240 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s----------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~ 240 (496)
.|.+||=.| |.||.+.+++..+-. ...|+++|.+ ..+++.+...+...+. .+.++..|..+
T Consensus 10 ~~k~~lVTG-as~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 87 (286)
T 3uve_A 10 EGKVAFVTG-AARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRD 87 (286)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCC
Confidence 466677555 456778777776533 3589999887 7888888777776654 57778889876
Q ss_pred Ccccc--------CCCCcCEEEECCC
Q 010971 241 LPKVL--------GLNTVDRVLLDAP 258 (496)
Q Consensus 241 ~~~~~--------~~~~fD~VLlDaP 258 (496)
..... ..+..|.++..|-
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 43211 1147999998664
No 491
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=82.22 E-value=9.9 Score=36.79 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=54.4
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCC------------HHHHHHHHHHHHHcCCCeEEEEecCCCCCccc
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMK------------ASRLKSLTANLHRMGVTNTIVCNYDGNELPKV 244 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s------------~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~ 244 (496)
.|.+||=.|+ .||.+.+++..+- ....|+++|.+ ..++..+...+...|. ++.++..|..+....
T Consensus 27 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGA-ARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHH
Confidence 4667775554 5677777776553 33489999987 7888888888877764 577788898764321
Q ss_pred c--------CCCCcCEEEECCC
Q 010971 245 L--------GLNTVDRVLLDAP 258 (496)
Q Consensus 245 ~--------~~~~fD~VLlDaP 258 (496)
. ..+..|.++..|-
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEECCC
Confidence 1 1157999988664
No 492
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=82.04 E-value=13 Score=34.22 Aligned_cols=76 Identities=18% Similarity=0.128 Sum_probs=48.5
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc---cc-CCCCcCE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VL-GLNTVDR 252 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~---~~-~~~~fD~ 252 (496)
.|.+||=. -|+|+.+.+++..+. ....|++++.+...+..+...+ .++.++..|..+... .+ ..+.+|.
T Consensus 6 ~~~~vlVT-GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 6 SGLRALVT-GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TTCEEEEE-STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred CCCEEEEe-CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCCcEEecCCCHHHHHHHHHHcCCCCE
Confidence 45677744 467888888887653 3348999999988776654432 234455778776422 11 1246899
Q ss_pred EEECCCC
Q 010971 253 VLLDAPC 259 (496)
Q Consensus 253 VLlDaPC 259 (496)
|+..|-.
T Consensus 80 vi~~Ag~ 86 (244)
T 1cyd_A 80 LVNNAAL 86 (244)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9986643
No 493
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=81.89 E-value=5 Score=37.52 Aligned_cols=79 Identities=14% Similarity=0.076 Sum_probs=48.7
Q ss_pred CCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEecCCCCCccc---c---
Q 010971 179 KERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGV------TNTIVCNYDGNELPKV---L--- 245 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~------~nv~v~~~D~~~~~~~---~--- 245 (496)
+.+||= .-|+|+.+.+++..+- ....|++++.+...+..+...+...|. .++.++..|..+.... +
T Consensus 7 ~k~vlI-TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 7 SALALV-TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEE-ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 556664 4566888888887553 334899999999888777665554441 3567778888764221 1
Q ss_pred --CCCCc-CEEEECCC
Q 010971 246 --GLNTV-DRVLLDAP 258 (496)
Q Consensus 246 --~~~~f-D~VLlDaP 258 (496)
..+.. |.|+..|-
T Consensus 86 ~~~~g~i~d~vi~~Ag 101 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAG 101 (264)
T ss_dssp HHHHSSCCSEEEECCC
T ss_pred HHHhCCCCeEEEECCC
Confidence 01345 99998664
No 494
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=81.82 E-value=1.7 Score=42.45 Aligned_cols=79 Identities=8% Similarity=0.057 Sum_probs=51.5
Q ss_pred CCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcc---ccCCCCcCEEE
Q 010971 179 KERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPK---VLGLNTVDRVL 254 (496)
Q Consensus 179 g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~---~~~~~~fD~VL 254 (496)
+.+|| +.-|+|+.+.+++..+... ..|++++.+......+...+....-.++.++..|..+... .+....+|.|+
T Consensus 5 ~~~vl-VTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 5 KGTIL-VTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CcEEE-EecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 55677 4557899999988765433 4899999876665555555544433456778888876432 22113789999
Q ss_pred ECCC
Q 010971 255 LDAP 258 (496)
Q Consensus 255 lDaP 258 (496)
..|-
T Consensus 84 h~A~ 87 (341)
T 3enk_A 84 HFAA 87 (341)
T ss_dssp ECCC
T ss_pred ECcc
Confidence 8654
No 495
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=81.70 E-value=12 Score=35.08 Aligned_cols=79 Identities=15% Similarity=0.118 Sum_probs=54.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |+||.+.+++..+-.. ..|++++.+..++..+.+.+...|. .+.++..|..+.... + ..+
T Consensus 13 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 13 ENKVALVTA-STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKAEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 356677554 6688888888765433 4899999999998888777776654 466677887654211 1 014
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 91 ~iD~lv~~Ag 100 (260)
T 2zat_A 91 GVDILVSNAA 100 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999998764
No 496
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=81.60 E-value=5.9 Score=36.60 Aligned_cols=75 Identities=17% Similarity=0.126 Sum_probs=47.6
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-CCCCcCE
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-GLNTVDR 252 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-~~~~fD~ 252 (496)
.|.+||=. -|+|+.+.+++..+.. ...|++++.+..+++.+...+ .++.++..|..+.... + ..+.+|.
T Consensus 6 ~~k~vlIT-GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 6 AGRRVLVT-GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCVDLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TTCEEEEE-STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred CCcEEEEE-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence 46677744 4568888888876533 348999999988877665432 1334557787764211 1 1246899
Q ss_pred EEECCC
Q 010971 253 VLLDAP 258 (496)
Q Consensus 253 VLlDaP 258 (496)
|+..|-
T Consensus 80 vi~~Ag 85 (244)
T 3d3w_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998553
No 497
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=81.57 E-value=13 Score=35.55 Aligned_cols=123 Identities=12% Similarity=0.115 Sum_probs=70.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCCC-cEEEEEeCCHH-HHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKNT-GLIYANEMKAS-RLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GL 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~~-g~V~A~D~s~~-rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~ 247 (496)
.|.+||=.| |+||.+.+++..+... ..|++++.+.. .++.+.+.+...|. ++.++..|..+..... ..
T Consensus 28 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTG-AGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356677555 5678888888765433 47888888754 35666666666654 4667778877642110 01
Q ss_pred CCcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeC
Q 010971 248 NTVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTC 313 (496)
Q Consensus 248 ~~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTC 313 (496)
+.+|.|+..|-....+. .+..+.++..... .-...++..++..+ +.+|.||+.+.
T Consensus 106 g~iD~lv~~Ag~~~~~~-------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~----~~~g~iv~isS 164 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGH-------VKDVTPEEFDRVFTINTRGQFFVAREAYKHL----EIGGRLILMGS 164 (283)
T ss_dssp SCCCEEEECCCCCCCCC-------GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS----CTTCEEEEECC
T ss_pred CCCCEEEECCCcCCCCC-------cccCCHHHHHHHHHHhhHHHHHHHHHHHHHH----hcCCeEEEEec
Confidence 47899998664322221 1223444333222 22233455555554 67788887654
No 498
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.52 E-value=5.7 Score=37.81 Aligned_cols=121 Identities=16% Similarity=0.101 Sum_probs=67.3
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCcccc--------CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKVL--------GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~~--------~~~ 248 (496)
.|.+||=.| |+||.+.+++..+.. ...|++++.+..+++.+.+.+ + .++.++..|..+..... ..+
T Consensus 5 ~~k~vlITG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 5 SGKTILVTG-AASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---E-AEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---C-SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c-CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 355666554 567888888776543 348999999988776654433 3 35777888887643211 114
Q ss_pred CcCEEEECCCCCCCCcccCCchhhccCCHHHHHHHH----HHHHHHHHHHHHhhhhcCCCCcEEEEEeCC
Q 010971 249 TVDRVLLDAPCSGTGVISKDESVKTSKSLEDIQKCS----YLQKQLILAAIDMVDANSKSGGYIVYSTCS 314 (496)
Q Consensus 249 ~fD~VLlDaPCSg~G~i~r~p~~k~~~s~~~i~~l~----~lQ~~LL~~A~~~l~~~lkpGG~LVYSTCS 314 (496)
.+|.|+..|-....+.+ +..+.++..... .-...++..++..+ +.+|.||+.+..
T Consensus 80 ~iD~lvnnAg~~~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~----~~~g~iv~isS~ 138 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALS-------WNLPLEAWEKVLRVNLTGSFLVARKAGEVL----EEGGSLVLTGSV 138 (263)
T ss_dssp CCCEEEEGGGGTTTTC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHC----CTTCEEEEECCC
T ss_pred CCcEEEECCCCCCCCCh-------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHH----hcCCEEEEEecc
Confidence 68999986643222211 223333332221 22233455555543 447888876543
No 499
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=81.47 E-value=9.5 Score=35.76 Aligned_cols=79 Identities=11% Similarity=0.109 Sum_probs=54.2
Q ss_pred CCCeEeeccCCCchHHHHHHHHcCC-CcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---cC------C
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMKN-TGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---LG------L 247 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~~-~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~~------~ 247 (496)
.+.+||=.| |+|+.+.+++..+-. ...|++++.+..++..+...+...+. ++.++..|..+.... +. .
T Consensus 13 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTG-GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 356677444 578888888876533 34899999999998888877776654 466777888764211 10 1
Q ss_pred CCcCEEEECCC
Q 010971 248 NTVDRVLLDAP 258 (496)
Q Consensus 248 ~~fD~VLlDaP 258 (496)
+.+|.|+..|-
T Consensus 91 ~~id~li~~Ag 101 (266)
T 1xq1_A 91 GKLDILINNLG 101 (266)
T ss_dssp TCCSEEEEECC
T ss_pred CCCcEEEECCC
Confidence 56899998653
No 500
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=81.40 E-value=12 Score=34.53 Aligned_cols=78 Identities=9% Similarity=0.023 Sum_probs=51.1
Q ss_pred CCCeEeeccCCCchHHHHHHHHcC-CCcEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecCCCCCccc---c-----CCC
Q 010971 178 EKERVIDMAAAPGGKTTYIAALMK-NTGLIYANEMKASRLKSLTANLHRMGVTNTIVCNYDGNELPKV---L-----GLN 248 (496)
Q Consensus 178 ~g~~VLDmcAgpGgKT~~lA~l~~-~~g~V~A~D~s~~rl~~l~~nl~r~g~~nv~v~~~D~~~~~~~---~-----~~~ 248 (496)
.|.+||=.| |+|+.+.+++..+. ....|++++.+...++.+...+... .++.++..|..+.... + ..+
T Consensus 5 ~~k~vlVtG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 5 DGKVAIITG-GTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 355666444 67888888887553 3348999999998877766555322 3577888888764211 1 014
Q ss_pred CcCEEEECCC
Q 010971 249 TVDRVLLDAP 258 (496)
Q Consensus 249 ~fD~VLlDaP 258 (496)
.+|.|+..|-
T Consensus 82 ~id~li~~Ag 91 (251)
T 1zk4_A 82 PVSTLVNNAG 91 (251)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998664
Done!