BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010972
(496 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 133/294 (45%), Gaps = 14/294 (4%)
Query: 94 DSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDL 153
D + E ++ ER+ V + + F ++ SA L L L +K +
Sbjct: 147 DQYSWTEWLRKQNIPERVNDEVFIAMAKALNFIDPDEISATVVLTALNRF-LQEKKGSMM 205
Query: 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-----KETYS 208
+ G E++ +P ++ ++ RG + L + +F+ +++ + + G ++
Sbjct: 206 AFLDGAPPERLCQPIVEHVQARGGDVLLNAPLKEFVLNDDSSVQAFRIAGIKGQEEQLIE 265
Query: 209 AGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACS 268
A A V A+ + L+ L+ ++ F ++ L + V+++ LWFD+K+T ++ +
Sbjct: 266 ADAYVSALPVDPLKLLLPDAWKA-MPYFQQLDGLQGVPVINIHLWFDRKLT--DIDHLLF 322
Query: 269 GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCI-K 327
L+ + D++ E++D ++++ F A + + D+ ++A ++ + K +
Sbjct: 323 SRSPLLS-VYADMSNTCREYEDPDRSMLELVFAPAKDWIGRSDEDILAATMAEIEKLFPQ 381
Query: 328 DFS---TATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRH 378
FS A + +KI + P S+ PG +Y + N F+ GD+ R+
Sbjct: 382 HFSGENPARLRKYKIVKTPLSVYKATPGRQQYRPDQASPIANFFLTGDYTMQRY 435
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 164/401 (40%), Gaps = 37/401 (9%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSA----QYSEEGLEVEFPIFQDLNQLPTPLGTLFY 59
F+ + N+ L EL I+ W + + Q + G F D +P P+ L
Sbjct: 57 FFGAYPNMLQLFKELDIEDRLQWKEHSMIFNQPEKPGTYSRF----DFPDIPAPINGLVA 112
Query: 60 TQFSRLPLVDRLT-------SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLY 112
+ D LT L L+ A++ + KY T E + R+
Sbjct: 113 ILRNN----DMLTWPEKIRFGLGLLPAIVQGQSYVEEMDKY---TWSEWMAKQNIPPRIE 165
Query: 113 RNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSM 172
+ V + + F ++ SA L L L + + + G E++ +P +D +
Sbjct: 166 KEVFIAMSKALNFIDPDEISATILLTALNRF-LQEKNGSKMAFLDGAPPERLCQPLVDYI 224
Query: 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-----KETYSAGAVVLAVGISTLQELIKN 227
RG E + + + + +E+ ++ G E +A V A+ + L+ ++
Sbjct: 225 TERGGEVHINKPLKEILLNEDGSVKGYLIRGLDGAPDEVITADLYVSAMPVDPLKTMVP- 283
Query: 228 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDE 287
+ EF ++ L + V+++ LWFD+K+T ++ + L+ + D++ E
Sbjct: 284 APWREYPEFKQIQGLEGVPVINLHLWFDRKLT--DIDHLLFSRSPLLS-VYADMSNTCRE 340
Query: 288 HKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDF----STATVMDHKIRRFP 343
+ D ++++ A + + D+++VA ++ + + + A ++ + + P
Sbjct: 341 YSDPDKSMLELVLAPAQDWIGKSDEEIVAATMAEIKQLFPQHFNGDNPARLLKSHVVKTP 400
Query: 344 KSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRH-GSWRG 383
+S+ PG TS PN ++AGD+ ++ GS G
Sbjct: 401 RSVYKATPGRQACRPDQRTSVPNFYLAGDFTMQKYLGSMEG 441
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 163/413 (39%), Gaps = 43/413 (10%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSAQ---YSEEGLEV-----EFPIFQDLNQLPTPLG 55
F++ + N+F+L+ ++G F + A + +G EV FPI N L
Sbjct: 57 FFFNYANLFALMRKVG--AFENLLPKAHTHTFINKGGEVGELDFRFPIGAPFNGLKAFFT 114
Query: 56 TLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNV 115
T T +L L + PL+ ++D++ R D I+ + F+ G SE + +
Sbjct: 115 TSQLTWLDKLQNALALGTSPLVRGILDYEGAMKIIRALDRISFADWFRSHGGSEGSLKRM 174
Query: 116 IGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 175
P+ F E SA L + + + A + L G+ E + +P +D ++ R
Sbjct: 175 WNPIAYALGFIDTENISARCMLTV-FQMFAAKTEASKLNLLAGSPAEYLHKPILDYIQAR 233
Query: 176 GCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAV--------VLAVGISTLQELIKN 227
G RRV + Y E VV G + AV + A + +Q L+
Sbjct: 234 GATLHLRRRVREIEYTETNG--QTVVTGLQIADGDAVERVEADVYLAACDVPGIQRLLPE 291
Query: 228 SILCNREEFLKVLNLASIDVVSVKLWFDKKVT------VPNVSNACSGFGDSLAWT---- 277
+ EF + L ++ V +V+L FD VT + + +G D+L +T
Sbjct: 292 A-WRKWSEFDNIYKLDAVPVATVQLRFDGWVTELGDREKRHQLDHATGL-DNLLYTADAD 349
Query: 278 ---FFD--LNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTA 332
F D L+ D ++ +++Q + + +K++ + + + +
Sbjct: 350 FSCFTDLALSSPKDYYRKGQGSLLQCVLTPGDPFIAMKNEDIAQHVLKQVHELFPSSRDL 409
Query: 333 TVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHGS 380
+ + + +SL PG + T N F+AG D+I + G+
Sbjct: 410 NMTWSNVVKLAQSLYREAPGMDPFRPDQKTPIANFFLAGSYTQQDYIDSMEGA 462
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 154/388 (39%), Gaps = 24/388 (6%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGW----MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFY 59
F+ + N+ +L ELGI W M A S+ G EF F + LP PL ++
Sbjct: 149 FFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPG---EFSRFDFPDVLPAPLNGIWA 205
Query: 60 TQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNV 115
+ + LT + I V + Y D ++ +E ++ G ER+ V
Sbjct: 206 ILRNN----EMLTWPEKIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEV 261
Query: 116 IGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 175
+ + F ++ S L I L + + + G E++ P +D +R+
Sbjct: 262 FIAMSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSL 320
Query: 176 GCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREE 235
G E R+ +++ S ++ T A V A + L+ L+ +
Sbjct: 321 GGEVQLNSRIKKIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDP-WKEIPY 379
Query: 236 FLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATV 295
F K+ L + V++V +WFD+K+ N + +L + D++ E+ D + ++
Sbjct: 380 FKKLDKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSM 437
Query: 296 IQADFYHANELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFF 350
++ F A E + D ++ + L K D S A ++ + + + P+S+
Sbjct: 438 LELVFAPAEEWISRTDSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTI 497
Query: 351 PGSYKYMMRGFTSFPNLFMAGDWITTRH 378
P + ++AGD+ ++
Sbjct: 498 PNCEPCRPLQRSPIEGFYLAGDYTKQKY 525
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/384 (18%), Positives = 156/384 (40%), Gaps = 16/384 (4%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLF--YT 60
F+ + N+ +L ELGI W + S ++ EF F LP PL +
Sbjct: 167 FFGAYPNMQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEALPAPLNGILAILK 226
Query: 61 QFSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPL 119
L +++ ++ L+ A++ + A D I+ ++ ++ G +R+ V +
Sbjct: 227 NNEMLTWPEKVKFAIGLLPAMLGGQSYVEA---QDGISVKDWMRKQGVPDRVTDEVFIAM 283
Query: 120 VQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEF 179
+ F ++ S L I L + + + G E++ P ++ + ++G +
Sbjct: 284 SKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQV 342
Query: 180 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 239
R+ +E+ ++ T A V A + + L+ F K+
Sbjct: 343 RLNSRIKKIELNEDGSVKCFILNDGSTIEGDAFVFATPVDIFKLLLPED-WKEIPYFQKL 401
Query: 240 LNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD 299
L + V++V +WFD+K+ N S+ L + D++ E+ D + ++++
Sbjct: 402 EKLVGVPVINVHIWFDRKLK--NTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELV 459
Query: 300 FYHANELMPLKDDQVVAKAVSYLSKCI-----KDFSTATVMDHKIRRFPKSLTHFFPGSY 354
F A E + D +++ + L+K D S A ++ + + + P+S+ PG
Sbjct: 460 FAPAEEWVSRSDSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCE 519
Query: 355 KYMMRGFTSFPNLFMAGDWITTRH 378
+ + ++AGD+ ++
Sbjct: 520 PCRLLQRSPVEGFYLAGDYTKQKY 543
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 150/385 (38%), Gaps = 18/385 (4%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF 62
F+ + NI +L EL I+ W + + ++ EF F LP P+ ++
Sbjct: 153 FFGAYPNIQNLFGELRIEDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPINGIWAILR 212
Query: 63 SRLPLVDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVIGP 118
+ + LT + I V + Y D +T E K+ G +R+ V
Sbjct: 213 NN----EMLTWPEKVKFAIGLLPAMVGGQPYVEAQDGLTVSEWMKKQGVPDRVNDEVFIA 268
Query: 119 LVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCE 178
+ + F ++ S L I L + + + G E++ P +D +R+RG E
Sbjct: 269 MSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGE 327
Query: 179 FLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLK 238
R+ + + + + A V A + + L+ F K
Sbjct: 328 VRLNSRIKKIELNPDGTVKHFALSDGTQITGDAYVCATPVDIFKLLVPQE-WSEITYFKK 386
Query: 239 VLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQA 298
+ L + V++V +WFD+K+ N + SL + D++ E+ D + ++++
Sbjct: 387 LEKLVGVPVINVHIWFDRKLN--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLEL 444
Query: 299 DFYHANELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFPGS 353
F A+E + D +++ + L+K D S A ++ + I + P+S+ P
Sbjct: 445 VFAPADEWIGRSDTEIIDATMEELAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNC 504
Query: 354 YKYMMRGFTSFPNLFMAGDWITTRH 378
+ ++AGD+ ++
Sbjct: 505 EPCRPLQRSPIEGFYLAGDYTKQKY 529
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 150/384 (39%), Gaps = 16/384 (4%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLF--YT 60
F+ + NI +L ELGI W + + ++ EF F LP PL ++
Sbjct: 161 FFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILR 220
Query: 61 QFSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPL 119
L +++ +L L+ A++ D T E K+ G +R+ V +
Sbjct: 221 NNEMLTWPEKVKFALGLLPAMV---GGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAM 277
Query: 120 VQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEF 179
+ F ++ S L I L + + + G E++ P +D +R+ G E
Sbjct: 278 SKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEV 336
Query: 180 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 239
R+ + + + + A V A + L+ L+ F K+
Sbjct: 337 RLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQE-WKEISYFKKL 395
Query: 240 LNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD 299
L + V++V +WFD+K+ N + SL + D++ E+ D + ++++
Sbjct: 396 EKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELV 453
Query: 300 FYHANELMPLKDDQVVAKAVSYLSKCI-----KDFSTATVMDHKIRRFPKSLTHFFPGSY 354
F A E + D +++ + L+K D S A ++ + + + P+S+ P
Sbjct: 454 FAPAEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCE 513
Query: 355 KYMMRGFTSFPNLFMAGDWITTRH 378
+ ++AGD+ ++
Sbjct: 514 PCRPLQRSPIEGFYLAGDYTKQKY 537
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 150/384 (39%), Gaps = 16/384 (4%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLF--YT 60
F+ + NI +L ELGI W + + ++ EF F LP PL ++
Sbjct: 161 FFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILR 220
Query: 61 QFSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPL 119
L +++ +L L+ A++ D T E K+ G +R+ V +
Sbjct: 221 NNEMLTWPEKVKFALGLLPAMV---GGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAM 277
Query: 120 VQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEF 179
+ F ++ S L I L + + + G E++ P +D +R+ G E
Sbjct: 278 SKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEV 336
Query: 180 LDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKV 239
R+ + + + + A V A + L+ L+ F K+
Sbjct: 337 RLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQE-WKEISYFKKL 395
Query: 240 LNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD 299
L + V++V +WFD+K+ N + SL + D++ E+ D + ++++
Sbjct: 396 EKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELV 453
Query: 300 FYHANELMPLKDDQVVAKAVSYLSKCI-----KDFSTATVMDHKIRRFPKSLTHFFPGSY 354
F A E + D +++ + L+K D S A ++ + + + P+S+ P
Sbjct: 454 FAPAEEWVGRSDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCE 513
Query: 355 KYMMRGFTSFPNLFMAGDWITTRH 378
+ ++AGD+ ++
Sbjct: 514 PCRPLQRSPIEGFYLAGDYTKQKY 537
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 166/410 (40%), Gaps = 36/410 (8%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMKSAQ-YSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF 62
F+ + N+F+L++++G K + + +G + F+ L P F+T
Sbjct: 57 FFGCYYNLFNLMEKVGAKQNLRLKEHTHTFVNQGGRIGELDFRFLTGAPFNGLKAFFTT- 115
Query: 63 SRLPLVDR------LTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVI 116
S+L D+ L + P++ ++DFD R D I+ E F G +E + +
Sbjct: 116 SQLDTKDKIANSIALATSPIVRGLVDFDGAMKTIRDLDRISFAEWFLSKGGNEGSLKKMW 175
Query: 117 GPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRG 176
P+ F E SA L I + + A + L G+ +E + +P + + RG
Sbjct: 176 DPIAYALGFIDTENISARCMLTI-FQLFAARTEASVLRMLEGSPQEYLHKPIQEYLEQRG 234
Query: 177 CEFLDGRRVTDF---IYDEER----CCISDVVCGKETYSAGAVVLAVGISTLQELIKNSI 229
+F +V + + D E I+D V K T +A A V A + ++ L+ +
Sbjct: 235 TKFYTRHKVKEIKTKVTDGETRVTGLIINDGVETK-TVTADAYVAACDVPGIKNLLPENW 293
Query: 230 LCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN----VSNACSGFG-DSLAWT------- 277
+ F K+ L ++ V +V+L FD VT N FG D+L +T
Sbjct: 294 RTQWDFFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDNLLYTSDAEFSC 353
Query: 278 FFDL--NKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 335
F DL D ++ +++Q + M ++ + + + + + +
Sbjct: 354 FADLALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPSAADLNMT 413
Query: 336 DHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHGS 380
+ + + +SL PG + T N F+AG D+I + G+
Sbjct: 414 WYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGA 463
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 137/350 (39%), Gaps = 35/350 (10%)
Query: 63 SRLPLVDRLTSL------PLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVI 116
S+L L D+L + P++ ++DF+ R D I+ + F+ G S + +
Sbjct: 116 SQLSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGSIKRMW 175
Query: 117 GPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRG 176
P+ F E SA L I F + + + L G+ E + +P + + RG
Sbjct: 176 NPIAYALGFIDCENISARCMLTIFQFFAVRSEASV-LRMLEGSPDEYLHQPILRYLEARG 234
Query: 177 CEFLDGRRVTDFIYDEE--RCCISDVVCGK----ETYSAGAVVLAVGISTLQELIKNSIL 230
+ R+V + Y E + ++ +V K E +A A V A I +Q ++
Sbjct: 235 TKVYTRRQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQE-W 293
Query: 231 CNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNA------CSGFGDSLAWT------- 277
EF + L ++ V +V++ FD VT N +G D+L +T
Sbjct: 294 RKWSEFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGL-DNLLYTADADFSC 352
Query: 278 FFDL--NKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 335
F DL D ++ +++Q + + ++ + + + + +
Sbjct: 353 FADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMT 412
Query: 336 DHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHGS 380
+ + + +SL PG Y T N F+AG D+I + G+
Sbjct: 413 WYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGA 462
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/387 (19%), Positives = 156/387 (40%), Gaps = 22/387 (5%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGW----MKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF- 58
F+ + NI +L ELGI W M A S+ G EF F LP PL +
Sbjct: 168 FFGAYPNIQNLFGELGINDRLQWKEHSMIFAMPSKPG---EFSRFDFSEALPAPLNGILA 224
Query: 59 -YTQFSRLPLVDRLT-SLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVI 116
L +++ ++ L+ A++ + A D I+ ++ ++ G +R+ V
Sbjct: 225 ILKNNEMLTWPEKVKFAIGLLPAMLGGQSYVEA---QDGISVKDWMRKQGVPDRVTDEVF 281
Query: 117 GPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRG 176
+ + F ++ S L I L + + + G E++ P ++ + ++G
Sbjct: 282 IAMSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKG 340
Query: 177 CEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEF 236
+ R+ +E+ S ++ A V A + + L+ F
Sbjct: 341 GQVRLNSRIKKIELNEDGSVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPED-WKEIPYF 399
Query: 237 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVI 296
K+ L + V++V +WFD+K+ N + SL + D++ E+ + + +++
Sbjct: 400 QKLEKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSML 457
Query: 297 QADFYHANELMPLKDDQVVAKAVSYLS-----KCIKDFSTATVMDHKIRRFPKSLTHFFP 351
+ F A E + D +++ + L+ + D S A ++ + + + P+S+ P
Sbjct: 458 ELVFAPAEEWISRSDSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVP 517
Query: 352 GSYKYMMRGFTSFPNLFMAGDWITTRH 378
G + ++AGD+ ++
Sbjct: 518 GCEPCRPLQRSPIEGFYLAGDYTKQKY 544
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/290 (18%), Positives = 120/290 (41%), Gaps = 9/290 (3%)
Query: 94 DSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDL 153
D ++ +E K+ G ER+ V + + F ++ S L I L + +
Sbjct: 246 DGLSVQEWMKKQGVPERVADEVFIAMSKALNFINPDELSMQCIL-IALNRFLQEKHGSKM 304
Query: 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVV 213
+ G E++ P +D +++ G E R+ +++ S ++ + A V
Sbjct: 305 AFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKIELNDDGTVKSFLLNNGKVMEGDAYV 364
Query: 214 LAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDS 273
A + L+ L+ ++ F ++ L + V++V +WFD+K+ N +
Sbjct: 365 FATPVDILKLLLPDN-WKGIPYFQRLDKLVGVPVINVHIWFDRKLK--NTYDHLLFSRSP 421
Query: 274 LAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIK-----D 328
L + D++ E+ + ++++ F A E + DD ++ ++ L+K D
Sbjct: 422 LLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDDDIIQATMTELAKLFPDEISAD 481
Query: 329 FSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRH 378
S A ++ + + + P+S+ P + ++AGD+ ++
Sbjct: 482 QSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKY 531
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 152/387 (39%), Gaps = 22/387 (5%)
Query: 4 FWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQF 62
F+ + N+ +L ELGI W + S ++ EF F LP PL ++
Sbjct: 154 FFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGIWAILR 213
Query: 63 SRLPLVDRLTSLPLMAAVIDFDNTDVAWRKY----DSITARELFKQFGCSERLYRNVIGP 118
+ + LT + I V + Y D +T E ++ G +R+ V
Sbjct: 214 NN----EMLTWPEKVRFAIGLLPAMVGGQAYVEAQDGLTVTEWMRRQGVPDRVNDEVFIA 269
Query: 119 LVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCE 178
+ + F ++ S L I L + + + G E++ P +D +++ G
Sbjct: 270 MSKALNFINPDELSMQCIL-IALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGR 328
Query: 179 FLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNRE--EF 236
R+ + + V+ + A V+A + L+ L+ RE F
Sbjct: 329 AQLNSRLQKIELNPDGTVKHFVLGNGNIITGDAYVVAAPVDILKLLLPQEW---REIPYF 385
Query: 237 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVI 296
K+ L + V++V +WFD+K+ N + L + D++ E+ D + +++
Sbjct: 386 QKLDKLVGVPVINVHIWFDRKLK--NTYDHLLFTRSPLLSVYADMSVTCKEYYDPNRSML 443
Query: 297 QADFYHANELMPLKDDQVVAKAVSYLSKCIK-----DFSTATVMDHKIRRFPKSLTHFFP 351
+ F A E + D +++ + + L+K D S A ++ + + + P+S+ P
Sbjct: 444 ELVFAPAEEWISRSDSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIP 503
Query: 352 GSYKYMMRGFTSFPNLFMAGDWITTRH 378
+ ++AGD+ ++
Sbjct: 504 DCEPCRPLQRSPIEGFYLAGDYTNQKY 530
>sp|Q5M900|B3GL2_XENTR UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Xenopus
tropicalis GN=b3galnt2 PE=2 SV=1
Length = 488
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 397 TILEMEAFLKLFQWRKMNLTLKHCAPSTEDLMKSERSFLYQITSFSEPIIEYED----FL 452
TI E EA L + R + + A ED + E S +Q F + Y + L
Sbjct: 266 TIHEGEALLNTLETRPERIQIHLAALEKEDALLQEESTTFQDIVFVHVVDTYRNVPSKLL 325
Query: 453 RQYQYT--YQSSVFIATTLLNCCIDIKDASTGFVHKVLK 489
YQ+T + S F+ T +C IDI++ HK L+
Sbjct: 326 NFYQWTAEFTSFEFLLKTDDDCFIDIENVLEKIAHKQLQ 364
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 157/410 (38%), Gaps = 36/410 (8%)
Query: 4 FWYPFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTL 57
F+ + N+F L+ ++G +K T + + L+ FP+ L+ + L T
Sbjct: 121 FFGCYSNLFRLMKKVGADNNLLVKEHTHTFVNKGGTIGELDFRFPVGAPLHGIQAFLRTN 180
Query: 58 FYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIG 117
+ + L P++ A++D D R D I+ + F G + +
Sbjct: 181 QLKVYDKARNAVALALSPVVRALVDPDGALQQVRDLDDISFSDWFMSKGGTRESITRMWD 240
Query: 118 PLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLV-WCRGTLREKIFEPWMDSMRTRG 176
P+ F + SA L I F + A + L+ +G+ + P + RG
Sbjct: 241 PVRYALGFIDCDNISARCMLTI--FTLFATKTEASLLRMLKGSPDVYLSGPIKKYITDRG 298
Query: 177 CEFLDGRRVTDFIYDEE-------RCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSI 229
F + +Y++ + + +E A A V A + ++ L+ S
Sbjct: 299 GRFHLRWGCREVLYEKSPDGETYVKGLLLTKATSREIIKADAYVAACDVPGIKRLLP-SE 357
Query: 230 LCNREEFLKVLNLASIDVVSVKLWFDKKVT----VPNVSNACSGFG-DSLAWT------- 277
E F + L + VV+V+L ++ VT + G D+L +T
Sbjct: 358 WREWEMFDNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDNLLYTADADFSC 417
Query: 278 FFDL--NKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 335
F DL + D + + ++IQA + MPL ++++++K + + V
Sbjct: 418 FSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSSRGLEVT 477
Query: 336 DHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHGS 380
+ + +SL PG+ + T N F++G D+I + G+
Sbjct: 478 WSSVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGA 527
>sp|Q31IB6|GLGB_THICR 1,4-alpha-glucan branching enzyme GlgB OS=Thiomicrospira crunogena
(strain XCL-2) GN=glgB PE=3 SV=1
Length = 726
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 235 EFLKVLNL-ASIDVVSVKLWFDKKVTVPNVSNAC--SGFGDSLAWT---------FFDLN 282
EFLK LN + ++ + P VS G G S+ W FF +
Sbjct: 439 EFLKTLNAEVHAQCPGALMMAEESTSWPMVSRPTWMGGLGFSMKWNMGWMNDTLDFFQQD 498
Query: 283 KIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKD 328
IY + + T Q Y N ++PL D+VV + +SK D
Sbjct: 499 PIYRPYHHNQLTFSQMYAYSENFILPLSHDEVVHMKHALVSKMPGD 544
>sp|Q9ZCN2|Y691_RICPR Uncharacterized protein RP691 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP691 PE=4 SV=1
Length = 656
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 237 LKVLNLAS-IDVVSVKLWFDKKVTVPNVSNACSGFGDSLA----WTFFDLNKIYDEHKDD 291
LK+L+LA+ IDV++ ++ NV NA S G ++A T LNKI DD
Sbjct: 578 LKLLSLATLIDVLTTA------ISDLNVGNAISSAGKNIAEKTATTLTWLNKIASGTNDD 631
Query: 292 SATVIQADFYHANELMPL 309
+ I D H EL PL
Sbjct: 632 TNDDIVIDIAHTEELQPL 649
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 82/419 (19%), Positives = 156/419 (37%), Gaps = 54/419 (12%)
Query: 4 FWYPFRNIFSLVDELG------IKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTL 57
F+ + N+F L+ ++G +K T + + L+ FP+ ++ + L T
Sbjct: 113 FFGCYNNLFRLMKKVGAEKNLLVKDHTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTN 172
Query: 58 FYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIG 117
+ +L L P++ A++D D R DSI+ + F G + + +
Sbjct: 173 QLKPYDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWD 232
Query: 118 PLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGC 177
P+ F + SA L I + + L +G+ + P + RG
Sbjct: 233 PVAYALGFIDCDNMSARCMLTIFSLFATKTEASL-LRMLKGSPDVYLSGPIKQYITDRGG 291
Query: 178 EFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSI---LCN-- 232
+ +YD+ ETY G LA+ +T ++++K + C+
Sbjct: 292 RIHLRWGCREILYDKS--------ADGETYVTG---LAISKATNKKIVKADVYVAACDVP 340
Query: 233 ----------REE--FLKVLNLASIDVVSVKLWFDKKVT----VPNVSNACSGFG-DSLA 275
RE F + L + VV+V+L ++ VT + G D+L
Sbjct: 341 GIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLL 400
Query: 276 WT-------FFDLN--KIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCI 326
+T F DL D + + T++Q + M + +D+++ K +++
Sbjct: 401 YTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELF 460
Query: 327 KDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAG-----DWITTRHGS 380
V + + +SL PG + T N F+AG D+I + G+
Sbjct: 461 PSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGA 519
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181,118,490
Number of Sequences: 539616
Number of extensions: 7524489
Number of successful extensions: 19340
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 19333
Number of HSP's gapped (non-prelim): 20
length of query: 496
length of database: 191,569,459
effective HSP length: 122
effective length of query: 374
effective length of database: 125,736,307
effective search space: 47025378818
effective search space used: 47025378818
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)