Query 010972
Match_columns 496
No_of_seqs 299 out of 2268
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 18:08:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 1.3E-29 4.4E-34 261.3 32.9 312 64-406 112-425 (425)
2 3i6d_A Protoporphyrinogen oxid 100.0 4.9E-28 1.7E-32 252.5 17.2 370 2-408 65-468 (470)
3 1s3e_A Amine oxidase [flavin-c 100.0 5.1E-27 1.7E-31 248.4 25.3 318 92-433 142-478 (520)
4 3lov_A Protoporphyrinogen oxid 100.0 8.7E-28 3E-32 251.4 18.2 374 2-412 60-469 (475)
5 3nks_A Protoporphyrinogen oxid 99.9 3.1E-27 1.1E-31 247.2 19.6 295 93-407 141-473 (477)
6 3nrn_A Uncharacterized protein 99.9 2.5E-25 8.5E-30 229.2 33.5 341 7-404 61-403 (421)
7 2ivd_A PPO, PPOX, protoporphyr 99.9 4.2E-27 1.4E-31 246.4 20.2 363 2-409 70-474 (478)
8 1sez_A Protoporphyrinogen oxid 99.9 5E-27 1.7E-31 247.5 17.2 371 2-410 67-495 (504)
9 2yg5_A Putrescine oxidase; oxi 99.9 3.6E-26 1.2E-30 237.6 20.3 293 91-409 141-452 (453)
10 2vvm_A Monoamine oxidase N; FA 99.9 1.2E-24 4.2E-29 228.7 22.5 295 90-412 180-489 (495)
11 4dgk_A Phytoene dehydrogenase; 99.9 9.7E-23 3.3E-27 214.4 22.7 290 96-408 164-491 (501)
12 4gde_A UDP-galactopyranose mut 99.9 1.8E-22 6.2E-27 212.8 15.9 363 1-406 65-477 (513)
13 4dsg_A UDP-galactopyranose mut 99.9 1E-22 3.6E-27 213.1 13.7 360 2-405 65-452 (484)
14 1b37_A Protein (polyamine oxid 99.9 1.6E-21 5.6E-26 203.7 13.6 298 93-411 135-461 (472)
15 3qj4_A Renalase; FAD/NAD(P)-bi 99.8 2.6E-20 9E-25 186.1 18.3 228 154-407 105-341 (342)
16 3k7m_X 6-hydroxy-L-nicotine ox 99.8 3.7E-18 1.3E-22 175.8 24.6 276 91-407 137-425 (431)
17 2iid_A L-amino-acid oxidase; f 99.8 1.3E-18 4.4E-23 182.9 17.2 291 91-411 178-487 (498)
18 2jae_A L-amino acid oxidase; o 99.8 1.4E-18 4.7E-23 182.2 13.0 233 151-408 229-485 (489)
19 2xag_A Lysine-specific histone 99.7 3.5E-17 1.2E-21 180.3 18.2 227 153-409 564-830 (852)
20 2z3y_A Lysine-specific histone 99.7 2.4E-17 8.3E-22 178.7 16.7 227 153-409 393-659 (662)
21 2b9w_A Putative aminooxidase; 99.7 2.2E-17 7.5E-22 169.7 15.1 276 93-405 140-423 (424)
22 1rsg_A FMS1 protein; FAD bindi 99.7 3E-16 1E-20 165.6 14.1 293 93-412 136-511 (516)
23 4gut_A Lysine-specific histone 99.7 1.2E-16 4.3E-21 174.7 10.7 230 152-406 525-775 (776)
24 3p1w_A Rabgdi protein; GDI RAB 99.6 2E-15 7E-20 155.6 17.2 213 2-219 93-313 (475)
25 3ayj_A Pro-enzyme of L-phenyla 99.6 5E-16 1.7E-20 166.8 8.5 302 91-412 279-683 (721)
26 2bcg_G Secretory pathway GDP d 99.6 5.6E-13 1.9E-17 138.1 26.0 197 7-219 93-299 (453)
27 1yvv_A Amine oxidase, flavin-c 99.6 4.9E-14 1.7E-18 139.8 17.3 223 156-412 105-331 (336)
28 1vg0_A RAB proteins geranylger 99.5 1.5E-13 5.1E-18 145.8 17.3 222 7-259 235-461 (650)
29 1d5t_A Guanine nucleotide diss 99.4 6.6E-12 2.3E-16 129.2 17.0 199 7-220 85-290 (433)
30 1i8t_A UDP-galactopyranose mut 99.3 8.9E-14 3E-18 140.1 -0.6 201 1-258 55-260 (367)
31 1v0j_A UDP-galactopyranose mut 99.3 1.4E-14 4.9E-19 147.6 -6.7 204 2-258 65-274 (399)
32 2bi7_A UDP-galactopyranose mut 99.3 4.9E-13 1.7E-17 135.4 3.4 196 1-255 59-260 (384)
33 3hdq_A UDP-galactopyranose mut 99.0 5.4E-10 1.9E-14 112.9 6.5 201 2-259 85-289 (397)
34 2e1m_C L-glutamate oxidase; L- 98.7 2.8E-09 9.5E-14 95.8 -0.1 97 303-410 48-154 (181)
35 1ryi_A Glycine oxidase; flavop 97.9 0.00027 9.3E-09 70.5 16.4 195 163-406 165-361 (382)
36 2gag_B Heterotetrameric sarcos 97.9 0.00066 2.3E-08 68.1 19.0 55 164-220 176-230 (405)
37 3dje_A Fructosyl amine: oxygen 97.8 0.00031 1.1E-08 71.6 16.1 55 164-220 163-221 (438)
38 1y56_B Sarcosine oxidase; dehy 97.8 0.00099 3.4E-08 66.4 18.4 56 163-220 150-205 (382)
39 3nyc_A D-arginine dehydrogenas 97.7 0.0023 7.9E-08 63.4 19.8 55 163-220 155-209 (381)
40 3axb_A Putative oxidoreductase 97.7 0.0011 3.9E-08 67.6 17.1 61 163-226 182-259 (448)
41 2gf3_A MSOX, monomeric sarcosi 97.6 0.0036 1.2E-07 62.3 18.6 59 164-226 152-210 (389)
42 3dme_A Conserved exported prot 97.5 0.001 3.4E-08 65.7 14.2 56 163-220 151-209 (369)
43 2oln_A NIKD protein; flavoprot 97.5 0.0051 1.8E-07 61.5 18.6 54 164-220 155-208 (397)
44 3ps9_A TRNA 5-methylaminomethy 97.4 0.00096 3.3E-08 72.1 13.4 55 163-220 418-473 (676)
45 1pj5_A N,N-dimethylglycine oxi 97.4 0.004 1.4E-07 69.0 17.6 56 163-220 152-207 (830)
46 3pvc_A TRNA 5-methylaminomethy 97.3 0.0032 1.1E-07 68.1 16.1 55 163-220 413-469 (689)
47 2e1m_A L-glutamate oxidase; L- 97.1 0.00059 2E-08 68.1 7.0 112 91-216 257-369 (376)
48 2e1m_B L-glutamate oxidase; L- 97.1 0.00056 1.9E-08 57.1 5.1 112 205-335 4-117 (130)
49 3da1_A Glycerol-3-phosphate de 96.9 0.02 6.8E-07 60.3 16.6 56 163-220 171-232 (561)
50 3cgv_A Geranylgeranyl reductas 96.7 0.035 1.2E-06 55.2 15.7 60 164-225 104-168 (397)
51 3kkj_A Amine oxidase, flavin-c 96.6 0.055 1.9E-06 49.7 15.6 88 309-412 244-331 (336)
52 2rgh_A Alpha-glycerophosphate 96.5 0.066 2.3E-06 56.4 16.9 56 163-220 189-250 (571)
53 3oz2_A Digeranylgeranylglycero 96.4 0.096 3.3E-06 51.6 17.0 60 164-225 104-168 (397)
54 2i0z_A NAD(FAD)-utilizing dehy 96.1 0.015 5.2E-07 59.3 9.2 65 154-220 126-191 (447)
55 3nlc_A Uncharacterized protein 95.8 0.017 5.8E-07 60.5 8.0 55 164-220 222-277 (549)
56 3fg2_P Putative rubredoxin red 95.8 0.021 7.3E-07 57.3 8.4 55 163-219 185-240 (404)
57 3lxd_A FAD-dependent pyridine 95.8 0.021 7.2E-07 57.5 8.3 55 163-219 195-250 (415)
58 2uzz_A N-methyl-L-tryptophan o 95.6 0.022 7.5E-07 56.1 7.6 54 164-220 151-204 (372)
59 3v76_A Flavoprotein; structura 95.5 0.038 1.3E-06 55.8 9.0 63 154-220 125-187 (417)
60 4at0_A 3-ketosteroid-delta4-5a 95.3 0.036 1.2E-06 57.5 8.5 56 164-220 204-264 (510)
61 2cdu_A NADPH oxidase; flavoenz 95.0 0.04 1.4E-06 56.2 7.6 55 163-219 192-246 (452)
62 1y0p_A Fumarate reductase flav 95.0 0.057 1.9E-06 56.9 8.8 58 162-220 255-317 (571)
63 1qo8_A Flavocytochrome C3 fuma 94.6 0.065 2.2E-06 56.4 8.0 58 162-220 250-312 (566)
64 1d4d_A Flavocytochrome C fumar 94.5 0.081 2.8E-06 55.8 8.5 58 162-220 255-317 (572)
65 2gqf_A Hypothetical protein HI 94.4 0.11 3.6E-06 52.2 8.7 63 154-220 102-168 (401)
66 2cul_A Glucose-inhibited divis 94.3 0.087 3E-06 48.3 7.1 53 164-219 70-124 (232)
67 3atr_A Conserved archaeal prot 94.2 0.12 4E-06 52.7 8.6 56 164-221 102-163 (453)
68 1q1r_A Putidaredoxin reductase 94.1 0.1 3.6E-06 52.7 8.1 54 164-219 193-249 (431)
69 3oc4_A Oxidoreductase, pyridin 94.1 0.086 2.9E-06 53.7 7.3 55 162-219 189-243 (452)
70 3iwa_A FAD-dependent pyridine 94.0 0.12 4.3E-06 52.8 8.5 54 163-219 203-257 (472)
71 2dkh_A 3-hydroxybenzoate hydro 94.0 0.9 3.1E-05 48.4 15.4 63 163-226 142-218 (639)
72 2gmh_A Electron transfer flavo 93.9 0.13 4.5E-06 54.3 8.5 56 164-220 146-217 (584)
73 3c4n_A Uncharacterized protein 93.8 0.045 1.5E-06 54.9 4.6 54 164-220 174-236 (405)
74 2qcu_A Aerobic glycerol-3-phos 93.7 0.13 4.3E-06 53.2 7.8 55 163-220 150-210 (501)
75 2ywl_A Thioredoxin reductase r 93.6 0.12 4.1E-06 45.0 6.5 53 164-220 58-110 (180)
76 1mo9_A ORF3; nucleotide bindin 93.4 0.15 5.2E-06 52.9 7.9 55 164-219 257-315 (523)
77 1trb_A Thioredoxin reductase; 93.4 0.2 6.8E-06 47.9 8.3 54 164-219 186-246 (320)
78 2e4g_A Tryptophan halogenase; 93.3 0.16 5.6E-06 53.1 8.0 55 164-220 196-252 (550)
79 3nix_A Flavoprotein/dehydrogen 93.3 0.15 5.3E-06 50.9 7.5 61 164-225 108-172 (421)
80 3e1t_A Halogenase; flavoprotei 93.2 0.18 6.2E-06 52.2 8.2 55 164-220 113-172 (512)
81 3ef6_A Toluene 1,2-dioxygenase 93.2 0.12 4.1E-06 51.9 6.5 54 164-220 187-241 (410)
82 2weu_A Tryptophan 5-halogenase 93.2 0.19 6.5E-06 51.9 8.2 55 164-220 175-230 (511)
83 1zk7_A HGII, reductase, mercur 93.1 0.21 7.2E-06 51.0 8.3 53 164-219 218-270 (467)
84 1xdi_A RV3303C-LPDA; reductase 93.0 0.17 5.9E-06 52.1 7.6 53 164-219 225-278 (499)
85 2x3n_A Probable FAD-dependent 93.0 0.13 4.6E-06 51.1 6.5 61 164-226 109-173 (399)
86 3o0h_A Glutathione reductase; 92.9 0.18 6E-06 51.8 7.4 53 164-219 234-287 (484)
87 2wpf_A Trypanothione reductase 92.8 0.18 6.2E-06 52.0 7.4 54 164-219 237-291 (495)
88 2v3a_A Rubredoxin reductase; a 92.8 0.2 6.9E-06 49.6 7.5 53 164-219 189-242 (384)
89 1fec_A Trypanothione reductase 92.7 0.17 5.9E-06 52.0 7.1 54 164-219 233-287 (490)
90 2hqm_A GR, grase, glutathione 92.7 0.21 7.1E-06 51.3 7.6 54 164-218 228-283 (479)
91 1n4w_A CHOD, cholesterol oxida 92.7 0.19 6.7E-06 51.9 7.4 60 166-225 225-293 (504)
92 1rp0_A ARA6, thiazole biosynth 92.5 0.25 8.7E-06 46.7 7.5 54 164-219 121-190 (284)
93 2h88_A Succinate dehydrogenase 92.5 0.22 7.7E-06 52.8 7.6 56 163-220 156-217 (621)
94 2wdq_A Succinate dehydrogenase 92.5 0.23 7.9E-06 52.4 7.7 58 162-220 143-206 (588)
95 2bs2_A Quinol-fumarate reducta 92.4 0.27 9.3E-06 52.6 8.3 56 163-220 159-220 (660)
96 4dna_A Probable glutathione re 92.3 0.22 7.5E-06 50.8 7.2 53 164-219 213-267 (463)
97 2bc0_A NADH oxidase; flavoprot 92.3 0.17 5.9E-06 52.0 6.4 53 164-219 238-290 (490)
98 4a9w_A Monooxygenase; baeyer-v 92.3 0.24 8.4E-06 47.8 7.2 55 164-220 78-132 (357)
99 1m6i_A Programmed cell death p 92.2 0.26 9E-06 50.7 7.6 53 164-219 228-281 (493)
100 1ges_A Glutathione reductase; 91.9 0.27 9.3E-06 49.9 7.3 54 164-219 210-264 (450)
101 2yqu_A 2-oxoglutarate dehydrog 91.8 0.31 1.1E-05 49.5 7.6 53 164-219 210-263 (455)
102 3cgb_A Pyridine nucleotide-dis 91.7 0.43 1.5E-05 48.8 8.6 54 163-219 228-281 (480)
103 2aqj_A Tryptophan halogenase, 91.7 0.35 1.2E-05 50.3 8.0 55 164-220 167-222 (538)
104 3g3e_A D-amino-acid oxidase; F 91.6 0.39 1.3E-05 46.7 7.9 45 163-221 143-187 (351)
105 2zxi_A TRNA uridine 5-carboxym 91.6 0.29 1E-05 51.7 7.2 54 164-220 125-180 (637)
106 3ces_A MNMG, tRNA uridine 5-ca 91.2 0.32 1.1E-05 51.6 7.0 54 164-220 126-181 (651)
107 3itj_A Thioredoxin reductase 1 91.2 0.36 1.2E-05 46.3 7.1 51 166-218 212-269 (338)
108 2pyx_A Tryptophan halogenase; 90.9 0.52 1.8E-05 48.9 8.3 55 164-220 177-233 (526)
109 3i3l_A Alkylhalidase CMLS; fla 90.8 0.45 1.5E-05 50.2 7.7 55 164-220 130-188 (591)
110 1coy_A Cholesterol oxidase; ox 90.7 0.43 1.5E-05 49.3 7.4 60 166-225 230-298 (507)
111 3ab1_A Ferredoxin--NADP reduct 90.7 0.42 1.4E-05 46.6 7.0 54 164-219 204-262 (360)
112 1nhp_A NADH peroxidase; oxidor 90.6 0.33 1.1E-05 49.2 6.3 53 164-219 193-245 (447)
113 3d1c_A Flavin-containing putat 90.6 0.44 1.5E-05 46.4 7.1 54 164-220 90-143 (369)
114 1kf6_A Fumarate reductase flav 90.6 0.45 1.5E-05 50.3 7.5 57 162-220 134-197 (602)
115 3cty_A Thioredoxin reductase; 90.5 0.54 1.8E-05 44.9 7.5 51 166-218 194-250 (319)
116 3alj_A 2-methyl-3-hydroxypyrid 90.4 0.55 1.9E-05 46.2 7.6 57 164-226 109-167 (379)
117 1onf_A GR, grase, glutathione 90.2 0.57 1.9E-05 48.3 7.8 55 163-219 218-274 (500)
118 3ihg_A RDME; flavoenzyme, anth 90.2 0.61 2.1E-05 48.4 8.1 61 163-225 121-189 (535)
119 3lad_A Dihydrolipoamide dehydr 90.2 0.64 2.2E-05 47.4 8.1 53 164-219 223-279 (476)
120 3ntd_A FAD-dependent pyridine 90.1 0.55 1.9E-05 49.0 7.7 54 164-219 194-266 (565)
121 2e5v_A L-aspartate oxidase; ar 90.0 0.46 1.6E-05 48.6 6.8 55 163-220 120-176 (472)
122 2r9z_A Glutathione amide reduc 90.0 0.64 2.2E-05 47.3 7.9 53 164-219 209-263 (463)
123 2gqw_A Ferredoxin reductase; f 89.9 0.59 2E-05 46.7 7.4 49 164-219 189-238 (408)
124 2eq6_A Pyruvate dehydrogenase 89.5 0.84 2.9E-05 46.4 8.3 53 164-219 212-270 (464)
125 2qae_A Lipoamide, dihydrolipoy 89.4 0.87 3E-05 46.3 8.3 53 164-219 217-275 (468)
126 1k0i_A P-hydroxybenzoate hydro 89.3 0.82 2.8E-05 45.1 7.9 60 164-225 105-169 (394)
127 3r9u_A Thioredoxin reductase; 89.3 0.64 2.2E-05 44.0 6.9 47 170-218 191-242 (315)
128 3ics_A Coenzyme A-disulfide re 88.8 0.62 2.1E-05 49.0 7.0 52 163-219 229-281 (588)
129 2a8x_A Dihydrolipoyl dehydroge 88.8 1 3.5E-05 45.7 8.4 53 164-219 214-270 (464)
130 1chu_A Protein (L-aspartate ox 88.7 0.46 1.6E-05 49.5 5.8 56 164-220 140-208 (540)
131 1zmd_A Dihydrolipoyl dehydroge 88.6 0.83 2.9E-05 46.5 7.6 55 163-219 221-281 (474)
132 2zbw_A Thioredoxin reductase; 88.5 1.2 4.1E-05 42.6 8.3 53 164-219 193-251 (335)
133 2qa2_A CABE, polyketide oxygen 88.4 1 3.6E-05 46.3 8.2 60 164-226 109-173 (499)
134 3urh_A Dihydrolipoyl dehydroge 88.4 0.95 3.3E-05 46.4 7.9 53 164-219 241-299 (491)
135 2bry_A NEDD9 interacting prote 88.3 0.41 1.4E-05 49.4 4.9 58 164-221 168-231 (497)
136 2qa1_A PGAE, polyketide oxygen 88.0 1.1 3.8E-05 46.1 8.0 60 164-226 108-172 (500)
137 3ab1_A Ferredoxin--NADP reduct 87.9 1.1 3.6E-05 43.6 7.6 54 164-219 76-130 (360)
138 1ebd_A E3BD, dihydrolipoamide 87.9 0.96 3.3E-05 45.8 7.4 53 164-219 213-269 (455)
139 3lzw_A Ferredoxin--NADP reduct 87.9 0.83 2.8E-05 43.6 6.7 53 164-218 69-121 (332)
140 3dk9_A Grase, GR, glutathione 87.8 1.5 5.1E-05 44.7 8.9 54 164-219 230-292 (478)
141 3fmw_A Oxygenase; mithramycin, 87.8 0.49 1.7E-05 49.7 5.3 59 164-225 150-213 (570)
142 1ojt_A Surface protein; redox- 87.7 0.69 2.3E-05 47.3 6.2 53 164-219 228-285 (482)
143 1v59_A Dihydrolipoamide dehydr 87.3 1.2 4E-05 45.5 7.7 53 164-219 226-286 (478)
144 3dgh_A TRXR-1, thioredoxin red 87.3 0.99 3.4E-05 46.1 7.2 54 164-219 229-288 (483)
145 2zbw_A Thioredoxin reductase; 87.3 1.1 3.7E-05 43.0 7.1 53 164-219 67-120 (335)
146 3cp8_A TRNA uridine 5-carboxym 87.3 0.81 2.8E-05 48.5 6.5 54 164-220 119-174 (641)
147 2vou_A 2,6-dihydroxypyridine h 87.2 1.1 3.8E-05 44.3 7.4 58 164-226 101-160 (397)
148 1vdc_A NTR, NADPH dependent th 87.1 0.91 3.1E-05 43.5 6.4 52 164-219 72-123 (333)
149 3h28_A Sulfide-quinone reducta 87.1 0.37 1.3E-05 48.6 3.7 50 164-218 202-254 (430)
150 3gwf_A Cyclohexanone monooxyge 87.0 0.96 3.3E-05 47.1 6.9 55 164-219 89-146 (540)
151 1jnr_A Adenylylsulfate reducta 86.9 1.2 3.9E-05 47.6 7.6 55 164-220 153-218 (643)
152 4ap3_A Steroid monooxygenase; 86.8 1.1 3.6E-05 46.9 7.1 55 164-219 101-158 (549)
153 3rp8_A Flavoprotein monooxygen 86.7 0.82 2.8E-05 45.4 6.0 57 164-225 129-187 (407)
154 3h8l_A NADH oxidase; membrane 86.5 0.76 2.6E-05 45.7 5.6 51 163-219 219-269 (409)
155 1dxl_A Dihydrolipoamide dehydr 85.9 1.3 4.5E-05 44.9 7.2 53 164-219 220-278 (470)
156 1fl2_A Alkyl hydroperoxide red 85.6 1.4 4.7E-05 41.7 6.8 55 164-219 58-114 (310)
157 3k30_A Histamine dehydrogenase 85.3 0.56 1.9E-05 50.5 4.2 54 164-219 569-623 (690)
158 1fl2_A Alkyl hydroperoxide red 85.2 1.5 5.3E-05 41.3 6.9 50 167-218 184-240 (310)
159 2xve_A Flavin-containing monoo 85.0 1.4 4.8E-05 44.8 6.9 55 164-219 103-165 (464)
160 3klj_A NAD(FAD)-dependent dehy 85.0 1.2 4.1E-05 44.1 6.2 45 169-218 69-114 (385)
161 3ic9_A Dihydrolipoamide dehydr 84.8 2 7E-05 43.9 8.0 52 164-219 217-273 (492)
162 1c0p_A D-amino acid oxidase; a 84.5 3.1 0.00011 40.3 8.9 43 163-220 143-185 (363)
163 3gyx_A Adenylylsulfate reducta 84.4 1.4 4.6E-05 47.2 6.6 57 164-220 168-233 (662)
164 1kdg_A CDH, cellobiose dehydro 84.4 1.6 5.4E-05 45.4 7.0 57 167-225 200-266 (546)
165 4b1b_A TRXR, thioredoxin reduc 84.1 2 6.8E-05 44.7 7.6 52 164-218 265-317 (542)
166 2q0l_A TRXR, thioredoxin reduc 83.9 2.5 8.6E-05 39.8 7.8 50 167-218 183-239 (311)
167 1y56_A Hypothetical protein PH 83.7 1.2 4E-05 45.8 5.6 49 168-219 263-312 (493)
168 3uox_A Otemo; baeyer-villiger 83.4 1.6 5.4E-05 45.5 6.5 55 164-219 89-146 (545)
169 3lzw_A Ferredoxin--NADP reduct 83.4 1.5 5.1E-05 41.7 5.9 48 168-218 195-248 (332)
170 2gjc_A Thiazole biosynthetic e 83.3 2.7 9.3E-05 40.5 7.7 39 164-202 148-191 (326)
171 3jsk_A Cypbp37 protein; octame 83.1 2.5 8.6E-05 41.0 7.4 57 164-220 162-251 (344)
172 4g6h_A Rotenone-insensitive NA 83.1 1.6 5.6E-05 44.8 6.4 56 160-218 270-330 (502)
173 2xdo_A TETX2 protein; tetracyc 82.8 1 3.5E-05 44.6 4.6 52 164-220 130-182 (398)
174 3dgz_A Thioredoxin reductase 2 82.5 2.8 9.7E-05 42.7 7.9 54 164-219 227-286 (488)
175 3f8d_A Thioredoxin reductase ( 82.1 2.1 7.3E-05 40.3 6.5 52 164-219 72-124 (323)
176 2gv8_A Monooxygenase; FMO, FAD 81.8 2 7E-05 43.2 6.5 54 164-220 117-177 (447)
177 3kd9_A Coenzyme A disulfide re 81.3 2 6.9E-05 43.3 6.3 54 162-219 190-243 (449)
178 3itj_A Thioredoxin reductase 1 81.1 2.7 9.3E-05 39.9 6.9 52 164-219 86-141 (338)
179 1hyu_A AHPF, alkyl hydroperoxi 81.0 2.3 8E-05 43.9 6.7 55 164-219 269-325 (521)
180 2jbv_A Choline oxidase; alcoho 81.0 2 6.8E-05 44.7 6.2 51 174-225 221-278 (546)
181 4hb9_A Similarities with proba 80.9 2.6 9E-05 41.3 6.8 50 174-225 121-172 (412)
182 3sx6_A Sulfide-quinone reducta 80.9 2.2 7.6E-05 42.8 6.4 49 164-217 210-266 (437)
183 2q0l_A TRXR, thioredoxin reduc 80.6 3.1 0.00011 39.1 7.0 52 164-219 61-113 (311)
184 3s5w_A L-ornithine 5-monooxyge 80.5 5 0.00017 40.4 8.9 42 175-219 329-376 (463)
185 1w4x_A Phenylacetone monooxyge 80.5 2.7 9.3E-05 43.6 7.0 55 164-219 96-153 (542)
186 3cty_A Thioredoxin reductase; 80.2 3.2 0.00011 39.4 6.9 52 164-219 74-125 (319)
187 1vdc_A NTR, NADPH dependent th 80.1 3.4 0.00012 39.3 7.2 48 172-219 205-258 (333)
188 3f8d_A Thioredoxin reductase ( 79.9 3.7 0.00013 38.6 7.3 49 168-219 195-250 (323)
189 2q7v_A Thioredoxin reductase; 79.8 4.1 0.00014 38.7 7.6 49 167-218 192-247 (325)
190 3c96_A Flavin-containing monoo 79.3 3.2 0.00011 41.1 6.9 58 164-225 109-175 (410)
191 3s5w_A L-ornithine 5-monooxyge 79.3 2.1 7.3E-05 43.2 5.7 55 164-218 129-190 (463)
192 3pl8_A Pyranose 2-oxidase; sub 78.0 2.7 9.3E-05 44.5 6.2 51 175-225 273-329 (623)
193 1lvl_A Dihydrolipoamide dehydr 77.9 2.3 7.9E-05 43.0 5.4 51 164-219 214-267 (458)
194 3hyw_A Sulfide-quinone reducta 77.6 1.5 5E-05 44.1 3.8 50 164-218 202-254 (430)
195 4eqs_A Coenzyme A disulfide re 76.5 2.8 9.4E-05 42.2 5.5 49 164-218 190-238 (437)
196 1xhc_A NADH oxidase /nitrite r 76.4 3.7 0.00013 40.1 6.3 48 164-219 185-233 (367)
197 3fpz_A Thiazole biosynthetic e 75.8 0.42 1.4E-05 46.1 -0.9 44 361-408 280-324 (326)
198 3d1c_A Flavin-containing putat 74.6 4 0.00014 39.4 5.9 52 164-218 216-270 (369)
199 1trb_A Thioredoxin reductase; 74.0 6.5 0.00022 37.0 7.2 52 164-219 64-115 (320)
200 3fbs_A Oxidoreductase; structu 73.5 4.6 0.00016 37.5 5.9 59 152-218 165-224 (297)
201 3vrd_B FCCB subunit, flavocyto 73.0 1.2 4.1E-05 44.0 1.7 44 172-218 212-256 (401)
202 1ps9_A 2,4-dienoyl-COA reducta 72.0 8.6 0.00029 40.9 8.2 50 165-219 576-627 (671)
203 2a87_A TRXR, TR, thioredoxin r 70.8 6.4 0.00022 37.5 6.3 51 164-219 73-125 (335)
204 3fbs_A Oxidoreductase; structu 70.4 7 0.00024 36.1 6.4 52 164-219 58-111 (297)
205 2r0c_A REBC; flavin adenine di 70.4 7.8 0.00027 40.1 7.3 57 164-226 140-203 (549)
206 3qvp_A Glucose oxidase; oxidor 69.8 6.7 0.00023 41.1 6.6 53 173-225 238-298 (583)
207 2q7v_A Thioredoxin reductase; 69.1 8.7 0.0003 36.3 6.8 53 164-219 67-122 (325)
208 1xhc_A NADH oxidase /nitrite r 68.7 6.5 0.00022 38.3 5.9 43 171-218 69-111 (367)
209 1hyu_A AHPF, alkyl hydroperoxi 68.7 6.9 0.00023 40.3 6.3 50 167-218 395-451 (521)
210 1q1r_A Putidaredoxin reductase 68.3 6.4 0.00022 39.3 5.9 45 170-219 68-113 (431)
211 1ju2_A HydroxynitrIle lyase; f 68.2 6.5 0.00022 40.7 6.0 54 172-225 204-266 (536)
212 1gpe_A Protein (glucose oxidas 67.6 6 0.0002 41.5 5.7 53 173-225 242-302 (587)
213 1cjc_A Protein (adrenodoxin re 66.9 8.8 0.0003 38.8 6.6 43 175-218 270-331 (460)
214 3q9t_A Choline dehydrogenase a 66.6 7 0.00024 40.8 5.9 52 174-225 218-275 (577)
215 3qfa_A Thioredoxin reductase 1 66.2 12 0.00042 38.3 7.7 55 164-219 252-314 (519)
216 3ef6_A Toluene 1,2-dioxygenase 64.5 7.1 0.00024 38.7 5.3 43 172-219 67-110 (410)
217 2gag_A Heterotetrameric sarcos 61.9 9.5 0.00033 42.6 6.2 49 169-218 323-381 (965)
218 2a87_A TRXR, TR, thioredoxin r 61.6 8.1 0.00028 36.8 5.0 44 172-218 201-250 (335)
219 4fk1_A Putative thioredoxin re 60.9 9.5 0.00032 35.8 5.3 50 164-216 182-232 (304)
220 1gte_A Dihydropyrimidine dehyd 60.4 19 0.00067 40.3 8.4 48 169-218 377-440 (1025)
221 1o94_A Tmadh, trimethylamine d 60.2 6.6 0.00023 42.3 4.4 49 166-219 575-645 (729)
222 3nlc_A Uncharacterized protein 60.2 5.5 0.00019 41.4 3.6 39 360-408 503-542 (549)
223 2cul_A Glucose-inhibited divis 60.0 2.6 9E-05 38.1 1.0 36 362-408 196-231 (232)
224 4fk1_A Putative thioredoxin re 59.3 14 0.00049 34.5 6.2 53 164-218 62-115 (304)
225 3fim_B ARYL-alcohol oxidase; A 58.5 7.1 0.00024 40.7 4.2 53 173-225 219-281 (566)
226 3t37_A Probable dehydrogenase; 57.9 15 0.0005 37.6 6.4 50 175-226 224-277 (526)
227 3r9u_A Thioredoxin reductase; 56.7 5 0.00017 37.6 2.4 52 164-218 64-116 (315)
228 3lxd_A FAD-dependent pyridine 56.3 12 0.00039 37.1 5.2 45 169-218 72-117 (415)
229 3l8k_A Dihydrolipoyl dehydroge 56.1 14 0.00048 37.2 5.9 51 164-219 216-271 (466)
230 2bc0_A NADH oxidase; flavoprot 56.0 15 0.00052 37.2 6.1 46 171-219 101-148 (490)
231 2x8g_A Thioredoxin glutathione 55.6 24 0.00084 36.7 7.8 55 164-219 328-394 (598)
232 2v3a_A Rubredoxin reductase; a 55.4 19 0.00066 35.0 6.6 43 172-219 70-112 (384)
233 2vdc_G Glutamate synthase [NAD 55.3 7.6 0.00026 39.2 3.7 46 170-218 310-376 (456)
234 3oc4_A Oxidoreductase, pyridin 55.0 10 0.00035 38.0 4.6 46 170-218 66-113 (452)
235 2gqw_A Ferredoxin reductase; f 54.9 9.1 0.00031 37.9 4.1 41 173-218 70-111 (408)
236 4b63_A L-ornithine N5 monooxyg 54.8 18 0.00063 36.8 6.5 55 164-218 147-212 (501)
237 3ics_A Coenzyme A-disulfide re 54.6 22 0.00075 36.9 7.2 48 168-218 99-150 (588)
238 4gcm_A TRXR, thioredoxin reduc 53.7 6.5 0.00022 37.0 2.7 52 164-219 64-115 (312)
239 1nhp_A NADH peroxidase; oxidor 53.6 22 0.00076 35.4 6.8 47 170-219 64-114 (447)
240 4a9w_A Monooxygenase; baeyer-v 51.8 8.8 0.0003 36.5 3.3 41 360-409 310-352 (357)
241 2cdu_A NADPH oxidase; flavoenz 51.8 23 0.00077 35.4 6.5 45 171-218 67-115 (452)
242 3cgb_A Pyridine nucleotide-dis 51.7 26 0.0009 35.3 7.1 43 174-219 105-151 (480)
243 3hyw_A Sulfide-quinone reducta 51.3 12 0.00042 37.2 4.4 42 172-219 66-108 (430)
244 1m6i_A Programmed cell death p 48.5 11 0.00038 38.3 3.6 40 174-218 102-142 (493)
245 3sx6_A Sulfide-quinone reducta 48.4 18 0.00063 35.9 5.2 47 168-220 65-112 (437)
246 3ntd_A FAD-dependent pyridine 46.8 30 0.001 35.6 6.7 43 173-218 69-115 (565)
247 3fg2_P Putative rubredoxin red 45.6 27 0.00092 34.2 5.8 44 169-218 64-108 (404)
248 1ebd_A E3BD, dihydrolipoamide 45.1 38 0.0013 33.8 7.0 50 164-219 93-144 (455)
249 1lqt_A FPRA; NADP+ derivative, 45.0 18 0.0006 36.5 4.4 41 175-218 265-324 (456)
250 3h8l_A NADH oxidase; membrane 44.6 23 0.00079 34.7 5.2 49 166-219 60-112 (409)
251 4eqs_A Coenzyme A disulfide re 44.4 26 0.00089 34.9 5.6 45 172-219 67-115 (437)
252 4a5l_A Thioredoxin reductase; 43.9 8.5 0.00029 36.0 1.8 51 164-218 68-119 (314)
253 3iwa_A FAD-dependent pyridine 43.8 29 0.00099 34.8 5.9 42 174-218 78-123 (472)
254 1chu_A Protein (L-aspartate ox 43.1 6.2 0.00021 40.9 0.7 45 361-408 364-410 (540)
255 3uox_A Otemo; baeyer-villiger 42.6 18 0.00061 37.4 4.1 45 169-221 345-392 (545)
256 2a8x_A Dihydrolipoyl dehydroge 40.8 42 0.0014 33.5 6.6 50 164-219 93-145 (464)
257 2i0z_A NAD(FAD)-utilizing dehy 40.6 6.3 0.00022 39.6 0.3 41 362-407 402-442 (447)
258 4a5l_A Thioredoxin reductase; 40.5 55 0.0019 30.2 7.0 40 360-408 272-311 (314)
259 3vrd_B FCCB subunit, flavocyto 39.0 40 0.0014 32.7 5.9 42 172-219 65-107 (401)
260 1dxl_A Dihydrolipoamide dehydr 37.2 52 0.0018 32.8 6.6 50 164-219 98-150 (470)
261 2ywl_A Thioredoxin reductase r 36.9 13 0.00043 31.7 1.6 39 361-408 132-170 (180)
262 1v59_A Dihydrolipoamide dehydr 36.9 43 0.0015 33.6 5.9 51 164-220 98-157 (478)
263 3gwf_A Cyclohexanone monooxyge 36.6 16 0.00054 37.7 2.6 43 173-222 341-386 (540)
264 1qo8_A Flavocytochrome C3 fuma 36.6 6.3 0.00022 41.0 -0.5 43 362-407 519-562 (566)
265 3kd9_A Coenzyme A disulfide re 36.2 29 0.00099 34.6 4.4 41 173-218 70-112 (449)
266 1pn0_A Phenol 2-monooxygenase; 36.1 69 0.0024 33.8 7.5 29 164-192 121-152 (665)
267 3klj_A NAD(FAD)-dependent dehy 35.8 11 0.00037 37.0 1.1 42 163-219 189-230 (385)
268 1d4d_A Flavocytochrome C fumar 35.6 5.8 0.0002 41.4 -1.0 43 362-407 525-568 (572)
269 1y0p_A Fumarate reductase flav 34.2 6.4 0.00022 41.0 -1.0 43 362-407 524-567 (571)
270 3ces_A MNMG, tRNA uridine 5-ca 33.6 37 0.0013 35.8 4.8 38 358-406 377-415 (651)
271 1kf6_A Fumarate reductase flav 32.8 10 0.00035 39.8 0.3 46 360-408 368-415 (602)
272 2zxi_A TRNA uridine 5-carboxym 32.3 41 0.0014 35.4 4.8 37 358-405 382-419 (637)
273 4gcm_A TRXR, thioredoxin reduc 30.8 76 0.0026 29.3 6.2 41 359-408 265-305 (312)
274 1y56_A Hypothetical protein PH 30.7 44 0.0015 33.8 4.7 44 174-219 172-218 (493)
275 2gjc_A Thiazole biosynthetic e 30.2 7.7 0.00026 37.3 -1.1 43 363-408 282-324 (326)
276 2qae_A Lipoamide, dihydrolipoy 29.9 78 0.0027 31.5 6.4 49 164-218 95-146 (468)
277 4at0_A 3-ketosteroid-delta4-5a 29.8 6.9 0.00024 40.1 -1.6 42 362-406 466-508 (510)
278 2bs2_A Quinol-fumarate reducta 28.5 13 0.00046 39.4 0.3 46 360-408 381-428 (660)
279 3jsk_A Cypbp37 protein; octame 27.6 6.3 0.00022 38.2 -2.2 46 364-412 293-338 (344)
280 3h28_A Sulfide-quinone reducta 27.5 52 0.0018 32.4 4.5 42 172-219 66-108 (430)
281 2yqu_A 2-oxoglutarate dehydrog 27.5 59 0.002 32.3 5.0 46 167-218 94-139 (455)
282 4ap3_A Steroid monooxygenase; 26.1 38 0.0013 34.9 3.3 42 172-221 353-397 (549)
283 1ojt_A Surface protein; redox- 25.9 87 0.003 31.4 5.9 50 164-219 97-159 (482)
284 1xdi_A RV3303C-LPDA; reductase 24.7 86 0.003 31.5 5.7 53 164-218 97-154 (499)
285 3c4a_A Probable tryptophan hyd 24.6 28 0.00095 33.7 1.8 45 164-221 100-144 (381)
286 2eq6_A Pyruvate dehydrogenase 24.5 94 0.0032 30.9 5.9 44 168-219 99-142 (464)
287 2vdc_G Glutamate synthase [NAD 24.3 25 0.00085 35.4 1.4 40 360-409 405-444 (456)
288 2h88_A Succinate dehydrogenase 23.9 12 0.0004 39.6 -1.2 44 362-408 387-432 (621)
289 1zmd_A Dihydrolipoyl dehydroge 23.2 1.4E+02 0.0046 29.7 6.8 47 167-219 102-151 (474)
290 4g5s_E PINS homolog, G-protein 21.5 35 0.0012 18.7 1.0 15 410-424 11-25 (26)
291 2hqm_A GR, grase, glutathione 20.9 1.1E+02 0.0038 30.6 5.5 49 165-219 108-159 (479)
292 2gqf_A Hypothetical protein HI 20.8 16 0.00056 36.0 -0.7 39 362-405 361-399 (401)
293 1lvl_A Dihydrolipoamide dehydr 20.7 2.2E+02 0.0074 28.1 7.7 44 168-219 102-145 (458)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.97 E-value=1.3e-29 Score=261.32 Aligned_cols=312 Identities=12% Similarity=0.070 Sum_probs=231.7
Q ss_pred CCChhhhhhhhhHHHHHhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHH
Q 010972 64 RLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI 143 (496)
Q Consensus 64 ~ls~~~kl~~~~~~~~~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~ 143 (496)
.+++.+|+++...+..+.. ...++.|+.+|++++ ++++..+.++.+++...++.+++++|+..++..+...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~--------~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 182 (425)
T 3ka7_A 112 LLSYKDRMKIALLIVSTRK--------NRPSGSSLQAWIKSQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM 182 (425)
T ss_dssp GSCHHHHHHHHHHHHHTTT--------SCCCSSBHHHHHHHH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhhhh--------cCCCCCCHHHHHHHh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH
Confidence 4688888876554333210 123689999999997 6666778999999999999999999999888877765
Q ss_pred HHhccCCcceEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHH
Q 010972 144 ILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQE 223 (496)
Q Consensus 144 ~~~~~~~~~~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~ 223 (496)
... ....+++||++. ++++|++.++++|++|++|++|++|..++ +++++|+++|+++.||.||+|+|++.+.+
T Consensus 183 ~~~----~~~~~~~gG~~~-l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 183 YRF----GGTGIPEGGCKG-IIDALETVISANGGKIHTGQEVSKILIEN--GKAAGIIADDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHH----CSCEEETTSHHH-HHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECSCHHHHHH
T ss_pred Hhc----CCccccCCCHHH-HHHHHHHHHHHcCCEEEECCceeEEEEEC--CEEEEEEECCEEEECCEEEECCCHHHHHH
Confidence 311 235789999987 99999999999999999999999999987 67888888998999999999999999999
Q ss_pred hhcccc-cc-ChHHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeeccCCCCcceEEecccccccCCCCCCcEEEEEee
Q 010972 224 LIKNSI-LC-NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY 301 (496)
Q Consensus 224 Ll~~~~-~~-~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~ 301 (496)
|++... ++ ...+.+.++++.+.++++++++++++... .++.+++.+......+...|...|.+++++++++.+...
T Consensus 256 ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~ 333 (425)
T 3ka7_A 256 LCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVG--HTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQY 333 (425)
T ss_dssp HTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSC--SSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEE
T ss_pred hcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccC--cCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEec
Confidence 987532 10 24455677888888888999999998752 334444433221112344466666666666677665444
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCCCCCCCCCCCCEEEcCCCccCCCCCC
Q 010972 302 HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSW 381 (496)
Q Consensus 302 ~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~rp~~~t~i~gL~lAGd~t~~~~G~~ 381 (496)
...+..+ .++++++.++++|++++|+. .+....+.+|+.++|++.+|+.. ++...+|++|||+||||+.+..|.
T Consensus 334 ~~~~~~~-~~~~~~~~~~~~l~~~~p~~---~~~~~~v~~~~~~~P~~~~~~~~-~~~~~~p~~gL~laG~~~~~~gg~- 407 (425)
T 3ka7_A 334 VAPENVK-NLESEIEMGLEDLKEIFPGK---RYEVLLIQSYHDEWPVNRAASGT-DPGNETPFSGLYVVGDGAKGKGGI- 407 (425)
T ss_dssp ECGGGGG-GHHHHHHHHHHHHHHHSTTC---CEEEEEEEEEBTTBCSBSSCTTC-CCCSBCSSBTEEECSTTSCCTTCC-
T ss_pred ccccccc-chHHHHHHHHHHHHHhCCCC---ceEEEEEEEECCCccccccccCC-CCCCCCCcCCeEEeCCccCCCCCC-
Confidence 3222111 23455799999999999984 34445788999999999998654 567778999999999999974444
Q ss_pred CCCCCCccccccCcChHHHHHHHHH
Q 010972 382 RGLMSPDSKLPTGWSTILEMEAFLK 406 (496)
Q Consensus 382 ~~~~~megAv~SG~~~~~AA~~il~ 406 (496)
.|++|+.||. +||++|+.
T Consensus 408 ----gv~~~~~s~~---~~~~~i~~ 425 (425)
T 3ka7_A 408 ----EVEGVALGVM---SVMEKVLG 425 (425)
T ss_dssp ----HHHHHHHHHH---HHHHC---
T ss_pred ----ccHHHHHHHH---HHHHHhhC
Confidence 3899999999 99999873
No 2
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.95 E-value=4.9e-28 Score=252.50 Aligned_cols=370 Identities=14% Similarity=0.148 Sum_probs=238.9
Q ss_pred ccccCCCccHHHHHHHhCCCCCCCcc--cceeeccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHHHH
Q 010972 2 QGFWYPFRNIFSLVDELGIKPFTGWM--KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAA 79 (496)
Q Consensus 2 H~~~~~y~~~~~Ll~eLGl~~~~~~~--~~~~~~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~~~ 79 (496)
|.+...++++.+|++++|+++..... ...+...+|+... +........|.++..+++.+.+++.+|++.+. .
T Consensus 65 ~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~ 138 (470)
T 3i6d_A 65 DSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHP---MPKGAVMGIPTKIAPFVSTGLFSLSGKARAAM---D 138 (470)
T ss_dssp CCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEE---CCC---------------------CCSHHHHH---H
T ss_pred hhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEECCEEEE---CCCCcccCCcCchHHhhccCcCCHHHHHHHhc---C
Confidence 67788899999999999999764422 1122223454221 11000112344444456677778878877432 1
Q ss_pred HhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHH------hc------
Q 010972 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIIL------AH------ 147 (496)
Q Consensus 80 ~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~------~~------ 147 (496)
.... .....+++|+.+|+++. ++.+..+.++.|++.++++.+++++|+...+..+..+.. ..
T Consensus 139 ~~~~-----~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (470)
T 3i6d_A 139 FILP-----ASKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRP 212 (470)
T ss_dssp HHSC-----CCSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-----------------
T ss_pred cccC-----CCCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhcc
Confidence 1111 11245789999999985 889999999999999999999999999877654421100 00
Q ss_pred ---------cCCcceEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCC
Q 010972 148 ---------QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVG 217 (496)
Q Consensus 148 ---------~~~~~~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p 217 (496)
.....+..++||++. +.++|++.+.+ ++|++|++|++|+.+++ ++. |++ +|+++.||+||+|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~g~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~~--~~~-v~~~~g~~~~ad~vi~a~p 286 (470)
T 3i6d_A 213 QGSGQQLTAKKQGQFQTLSTGLQT-LVEEIEKQLKL--TKVYKGTKVTKLSHSGS--CYS-LELDNGVTLDADSVIVTAP 286 (470)
T ss_dssp --------------EEEETTCTHH-HHHHHHHTCCS--EEEECSCCEEEEEECSS--SEE-EEESSSCEEEESEEEECSC
T ss_pred ccccccccccCCceEEEeCChHHH-HHHHHHHhcCC--CEEEeCCceEEEEEcCC--eEE-EEECCCCEEECCEEEECCC
Confidence 002246678899997 88888876643 79999999999998873 464 777 577899999999999
Q ss_pred hhhHHHhhccccccChHHHHHHhcCCCccEEEEEEEEccCCCCCCC-C-ceeeccCCC--CcceEEecccccccCCCCCC
Q 010972 218 ISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNV-S-NACSGFGDS--LAWTFFDLNKIYDEHKDDSA 293 (496)
Q Consensus 218 ~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~-~-~~~~g~~~~--~~~~~~d~s~~~~~~~~~~~ 293 (496)
++.+.++++.++ ....++.+++.++.++++.|++++|.... . ..+...+.. ...+.++ +...+...+.+.
T Consensus 287 ~~~~~~l~~~~~-----~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~~~ 360 (470)
T 3i6d_A 287 HKAAAGMLSELP-----AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWT-NKKWPHAAPEGK 360 (470)
T ss_dssp HHHHHHHTTTST-----THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEH-HHHCGGGSCTTC
T ss_pred HHHHHHHcCCch-----hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEE-cCcCCCcCCCCC
Confidence 999999887642 23467888899999999999999873211 1 112111111 1122343 222222232234
Q ss_pred cEEEEEee--cCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCC----CCCCCCCCCCE
Q 010972 294 TVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNL 367 (496)
Q Consensus 294 ~ll~~~~~--~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~----rp~~~t~i~gL 367 (496)
.++.+.+. .+..+..++++++++.++++|++++|... ++....+++|+++.+.+.+|+... ++...++.+||
T Consensus 361 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~--~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l 438 (470)
T 3i6d_A 361 TLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNING--EPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGV 438 (470)
T ss_dssp EEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCS--CCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTE
T ss_pred EEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCCC--CceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCE
Confidence 45544443 23345678999999999999999998643 577788999999999999987421 22233467899
Q ss_pred EEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 368 FMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 368 ~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
|+||+|+.. . . |++|+.||. ++|++|++.+
T Consensus 439 ~~aG~~~~g-~-g------v~~a~~sG~---~aA~~i~~~l 468 (470)
T 3i6d_A 439 YMTGASFEG-V-G------IPDCIDQGK---AAVSDALTYL 468 (470)
T ss_dssp EECSTTTSC-C-S------HHHHHHHHH---HHHHHHHHHH
T ss_pred EEEeecCCC-C-C------HHHHHHHHH---HHHHHHHHHh
Confidence 999998752 2 2 799999999 9999999876
No 3
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.95 E-value=5.1e-27 Score=248.41 Aligned_cols=318 Identities=14% Similarity=0.091 Sum_probs=225.7
Q ss_pred ccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH-----HhccCCcceEEecCCchhhhHH
Q 010972 92 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII-----LAHQKNFDLVWCRGTLREKIFE 166 (496)
Q Consensus 92 ~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~-----~~~~~~~~~~~~~GG~~~~l~~ 166 (496)
.++++|+.+|+++++.++.+ +.++.+++.+.++.+++++|+..++.++.... .....+....+++||+++ +++
T Consensus 142 ~~~~~s~~~~l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~-l~~ 219 (520)
T 1s3e_A 142 EWDNMTMKELLDKLCWTESA-KQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ-VSE 219 (520)
T ss_dssp HHHTSBHHHHHHHHCSSHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHH-HHH
T ss_pred hhhccCHHHHHHhhCCCHHH-HHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHH-HHH
Confidence 36789999999998666655 78999999999999999999998876654210 011123345778999997 888
Q ss_pred HHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHHHhhccccccChHHHHHHhcCCCc
Q 010972 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASI 245 (496)
Q Consensus 167 aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~ 245 (496)
+|++.+ |++|++|++|++|..++ +++. |++ +|+++.||+||+|+|++.+.+++..+.++ ....+.++++++.
T Consensus 220 ~l~~~l---g~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp-~~~~~~i~~~~~~ 292 (520)
T 1s3e_A 220 RIMDLL---GDRVKLERPVIYIDQTR--ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP-MMRNQMITRVPLG 292 (520)
T ss_dssp HHHHHH---GGGEESSCCEEEEECSS--SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCC-HHHHHHTTSCCBC
T ss_pred HHHHHc---CCcEEcCCeeEEEEECC--CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCC-HHHHHHHHhCCCc
Confidence 888765 78999999999999877 4565 666 67789999999999999998887655442 3334567888888
Q ss_pred cEEEEEEEEccCCCCCCCCcee-e-ccCCCCcceEEecccccccCCCCCCcEEEEEee--cCCCCCCCCHHHHHHHHHHH
Q 010972 246 DVVSVKLWFDKKVTVPNVSNAC-S-GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSY 321 (496)
Q Consensus 246 ~~~~v~l~~~~~~~~~~~~~~~-~-g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~--~~~~~~~~~~eel~~~vl~~ 321 (496)
++.++++.|++++|........ + .........+++.+.. + ++..++..... .+..|.+++++++.+.++++
T Consensus 293 ~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~-~----~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~ 367 (520)
T 1s3e_A 293 SVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKP-E----GNYAAIMGFILAHKARKLARLTKEERLKKLCEL 367 (520)
T ss_dssp CEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECCCT-T----SCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCCCC-C----CCCCEEEEEccchhhhhhhcCCHHHHHHHHHHH
Confidence 9999999999998732211111 1 0111222335554321 1 12244433222 23467778999999999999
Q ss_pred HhHhcCCCCCCeeEeEEEEeeCCC-----ce--eeCCCCc-CCCCCCCCCCCCEEEcCCCccC-CCCCCCCCCCCccccc
Q 010972 322 LSKCIKDFSTATVMDHKIRRFPKS-----LT--HFFPGSY-KYMMRGFTSFPNLFMAGDWITT-RHGSWRGLMSPDSKLP 392 (496)
Q Consensus 322 L~~~~P~~~~~~v~~~~v~~~~~a-----~~--~~~pG~~-~~rp~~~t~i~gL~lAGd~t~~-~~G~~~~~~~megAv~ 392 (496)
|++++|.....++.+..+.+|... .+ .+.||.. .+++...+|++||||||+++++ ++|. |+||+.
T Consensus 368 L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~------v~GAi~ 441 (520)
T 1s3e_A 368 YAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGY------MEGAVE 441 (520)
T ss_dssp HHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTS------HHHHHH
T ss_pred HHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEE------hHHHHH
Confidence 999998531124666777788532 22 2455642 2334566789999999999976 5566 999999
Q ss_pred cCcChHHHHHHHHHHcCCCCcccccCCCCCccchhHhhccc
Q 010972 393 TGWSTILEMEAFLKLFQWRKMNLTLKHCAPSTEDLMKSERS 433 (496)
Q Consensus 393 SG~~~~~AA~~il~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 433 (496)
||. +||++|++.++.... ...+...|+..+++++.-.
T Consensus 442 SG~---~aA~~i~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 478 (520)
T 1s3e_A 442 AGE---RAAREILHAMGKIPE-DEIWQSEPESVDVPAQPIT 478 (520)
T ss_dssp HHH---HHHHHHHHHTTSSCG-GGSSCCCCCCSSSCCCCCC
T ss_pred HHH---HHHHHHHHHHhcCcc-ccccccCCccccCCccccc
Confidence 999 999999999986653 4577778888888877543
No 4
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.95 E-value=8.7e-28 Score=251.38 Aligned_cols=374 Identities=12% Similarity=0.078 Sum_probs=251.0
Q ss_pred ccccCCCccHHHHHHHhCCCCCCCcc--cceeeccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHHHH
Q 010972 2 QGFWYPFRNIFSLVDELGIKPFTGWM--KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAA 79 (496)
Q Consensus 2 H~~~~~y~~~~~Ll~eLGl~~~~~~~--~~~~~~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~~~ 79 (496)
|.+...++++.++++++|++...... ...+...+|+... +........|.+...+++.+.+++.+|+ .+. .
T Consensus 60 ~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~---~p~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~---~ 132 (475)
T 3lov_A 60 DSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHP---IPKGAVMGIPTDLDLFRQTTLLTEEEKQ-EVA---D 132 (475)
T ss_dssp CCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEE---CCSSEETTEESCHHHHTTCSSSCHHHHH-HHH---H
T ss_pred hhhhcccHHHHHHHHHcCCcceEeecCCCceEEEECCEEEE---CCCcccccCcCchHHHhhccCCChhHHH-Hhh---C
Confidence 67788899999999999998654322 1122223454221 1100012234444456778889998888 322 1
Q ss_pred HhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH----------Hhcc-
Q 010972 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LAHQ- 148 (496)
Q Consensus 80 ~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~----------~~~~- 148 (496)
+.... ....+...+++|+.+|++++ +++++.+.++.|++.++++.+++++|+.+++..+..+. ....
T Consensus 133 ~~~~~-~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~ 210 (475)
T 3lov_A 133 LLLHP-SDSLRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRP 210 (475)
T ss_dssp HHHSC-CTTCCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC
T ss_pred cccCC-cccccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcc
Confidence 11111 11112246789999999985 88999999999999999999999999876555543221 0001
Q ss_pred -------------CCcceEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEE
Q 010972 149 -------------KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVL 214 (496)
Q Consensus 149 -------------~~~~~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~ 214 (496)
.+..+.+++||++. +.++|++.+.+ ++|++|++|++|+.++ +++. |++ +| ++.||+||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~G~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~~-v~~~~g-~~~ad~vV~ 283 (475)
T 3lov_A 211 LDQLPQTPQTTIKATGQFLSLETGLES-LIERLEEVLER--SEIRLETPLLAISRED--GRYR-LKTDHG-PEYADYVLL 283 (475)
T ss_dssp --------------CCSEEEETTCHHH-HHHHHHHHCSS--CEEESSCCCCEEEEET--TEEE-EECTTC-CEEESEEEE
T ss_pred cccccccccccccCCCcEEeeCChHHH-HHHHHHhhccC--CEEEcCCeeeEEEEeC--CEEE-EEECCC-eEECCEEEE
Confidence 13456789999998 88888877643 7999999999999887 4564 777 46 899999999
Q ss_pred cCChhhHHHhhccccccChHHHHHHhcCCCccEEEEEEEEccCCCCCCCC-ceeeccCCCC--cceEEecccccccCCCC
Q 010972 215 AVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVS-NACSGFGDSL--AWTFFDLNKIYDEHKDD 291 (496)
Q Consensus 215 A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~-~~~~g~~~~~--~~~~~d~s~~~~~~~~~ 291 (496)
|+|++.+.+|++.+++ ..+.++++.++.++++.|+++++.+... ..+...+.+. ..+.|+ +...+... |
T Consensus 284 a~p~~~~~~ll~~~~~------~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~-p 355 (475)
T 3lov_A 284 TIPHPQVVQLLPDAHL------PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSA-P 355 (475)
T ss_dssp CSCHHHHHHHCTTSCC------HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTC-T
T ss_pred CCCHHHHHHHcCccCH------HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCC-C
Confidence 9999999999876532 4677888999999999999987322111 1121112111 122343 22223222 2
Q ss_pred CCcEEEEEee--cCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCC----CCCCCCCCC
Q 010972 292 SATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFP 365 (496)
Q Consensus 292 ~~~ll~~~~~--~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~----rp~~~t~i~ 365 (496)
+..++.+.+. .+..+.+++++++++.++++|++++|... .+.+..+++|+.+++.+.+|+... ++...++.+
T Consensus 356 ~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~--~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~ 433 (475)
T 3lov_A 356 DHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTL--EPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYP 433 (475)
T ss_dssp TEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCC--CCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHST
T ss_pred CcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCC--CCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCC
Confidence 3334444333 23445678999999999999999998643 577788999999999999997321 222334678
Q ss_pred CEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHcCCCC
Q 010972 366 NLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQWRK 412 (496)
Q Consensus 366 gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg~~~ 412 (496)
|||+||+++.. .. |++|+.||. +||++|++.++...
T Consensus 434 ~l~~aG~~~~g--~g------~~~a~~sG~---~aA~~i~~~l~~~~ 469 (475)
T 3lov_A 434 GIYLAGLAYDG--VG------LPDCVASAK---TMIESIELEQSHTD 469 (475)
T ss_dssp TEEECSTTTSC--SS------HHHHHHHHH---HHHHHHHHTC----
T ss_pred CEEEEccCCCC--CC------HHHHHHHHH---HHHHHHHHHhhccc
Confidence 99999998763 22 899999999 99999999886443
No 5
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.95 E-value=3.1e-27 Score=247.24 Aligned_cols=295 Identities=12% Similarity=0.064 Sum_probs=215.9
Q ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhc-------------------------
Q 010972 93 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH------------------------- 147 (496)
Q Consensus 93 ~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~------------------------- 147 (496)
.+++|+.+|++++ +++++.+.++.|++.++++.+++++|+..+++.+.......
T Consensus 141 ~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~ 219 (477)
T 3nks_A 141 EPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQA 219 (477)
T ss_dssp SSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHH
T ss_pred CCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhh
Confidence 4789999999985 88999999999999999999999999998876654421000
Q ss_pred -cCCcceEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHHhhc
Q 010972 148 -QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIK 226 (496)
Q Consensus 148 -~~~~~~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~ 226 (496)
.....+.+++||++. ++++|++.+++.|++|++|++|++|+.+++ +++.|+++|+++.||+||+|+|++.+.+|++
T Consensus 220 ~~~~~~~~~~~gG~~~-l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~--~~~~v~~~~~~~~ad~vv~a~p~~~~~~ll~ 296 (477)
T 3nks_A 220 LAERWSQWSLRGGLEM-LPQALETHLTSRGVSVLRGQPVCGLSLQAE--GRWKVSLRDSSLEADHVISAIPASVLSELLP 296 (477)
T ss_dssp HHTTCSEEEETTCTTH-HHHHHHHHHHHTTCEEECSCCCCEEEECGG--GCEEEECSSCEEEESEEEECSCHHHHHHHSC
T ss_pred cccCccEEEECCCHHH-HHHHHHHHHHhcCCEEEeCCEEEEEEEcCC--ceEEEEECCeEEEcCEEEECCCHHHHHHhcc
Confidence 112346889999998 999999999999999999999999998763 3345777777899999999999999999987
Q ss_pred cccccChHHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeecc--CCCCcceEEecccccccCCCCCCcEEEEEeecC-
Q 010972 227 NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGF--GDSLAWTFFDLNKIYDEHKDDSATVIQADFYHA- 303 (496)
Q Consensus 227 ~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~--~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~~~- 303 (496)
... ++..+.+.++++.++.++++.|+++++.......+... +..+..++|+.+..+....+|+..++.+.+...
T Consensus 297 ~~~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~ 373 (477)
T 3nks_A 297 AEA---APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSW 373 (477)
T ss_dssp GGG---HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHH
T ss_pred ccC---HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCcc
Confidence 642 34556778889999999999999987732222222111 112234466644332211123455665544321
Q ss_pred -----CCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCCCCC----CCCCCCCEEEcCCCc
Q 010972 304 -----NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMR----GFTSFPNLFMAGDWI 374 (496)
Q Consensus 304 -----~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~rp~----~~t~i~gL~lAGd~t 374 (496)
......+++++++.++++|+++++... ++.+..+++|++++|++.+|+...... .....+||++||||+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~ 451 (477)
T 3nks_A 374 LQTLEASGCVLSQELFQQRAQEAAATQLGLKE--MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASY 451 (477)
T ss_dssp HHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTT
T ss_pred ccccccccCCCCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCC
Confidence 111246899999999999999997532 567788999999999999997532211 111236899999997
Q ss_pred cCCCCCCCCCCCCccccccCcChHHHHHHHHHH
Q 010972 375 TTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKL 407 (496)
Q Consensus 375 ~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~ 407 (496)
.+ .| |++|+.||. .||++|++.
T Consensus 452 ~G-~g-------v~~a~~sg~---~aA~~il~~ 473 (477)
T 3nks_A 452 EG-VA-------VNDCIESGR---QAAVSVLGT 473 (477)
T ss_dssp SC-CS-------HHHHHHHHH---HHHHHHHHC
T ss_pred CC-Cc-------HHHHHHHHH---HHHHHHHhc
Confidence 43 33 799999999 999999874
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.95 E-value=2.5e-25 Score=229.15 Aligned_cols=341 Identities=13% Similarity=0.058 Sum_probs=223.5
Q ss_pred CCccHHHHHHHhCCCCCCCccc--ceeeccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHHHHHhccC
Q 010972 7 PFRNIFSLVDELGIKPFTGWMK--SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (496)
Q Consensus 7 ~y~~~~~Ll~eLGl~~~~~~~~--~~~~~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~~~~~~~~ 84 (496)
.++.+.++++++|+........ ..++ .+|+.+. ++.+ ...+++.++.++..........
T Consensus 61 ~~~~~~~l~~~lg~~~~~~~~~~~~~~~-~~g~~~~---------~~~~--------~~~l~~~~~~~~~~~~~~~~~~- 121 (421)
T 3nrn_A 61 EDGPLAHLLRILGAKVEIVNSNPKGKIL-WEGKIFH---------YRES--------WKFLSVKEKAKALKLLAEIRMN- 121 (421)
T ss_dssp TSSHHHHHHHHHTCCCCEEECSSSCEEE-ETTEEEE---------GGGG--------GGGCC--------CCHHHHHTT-
T ss_pred CChHHHHHHHHhCCcceEEECCCCeEEE-ECCEEEE---------cCCc--------hhhCCHhHHHHHHHHHHHHHhc-
Confidence 4668999999999975422211 1222 2454211 1111 1235667777765443332210
Q ss_pred CChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhccCCcceEEecCCchhhh
Q 010972 85 NTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKI 164 (496)
Q Consensus 85 ~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~l 164 (496)
....++.|+.+|+++++++++.++.++.+++...++.+++++|+..++..+..... . ....+++||++. +
T Consensus 122 -----~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~g~~~~~gG~~~-l 191 (421)
T 3nrn_A 122 -----KLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR--W--GGPGLIRGGCKA-V 191 (421)
T ss_dssp -----CCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--H--CSCEEETTCHHH-H
T ss_pred -----cCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh--c--CCcceecCCHHH-H
Confidence 11235699999999976777777899999999999999999999988887776531 1 135789999987 9
Q ss_pred HHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHHhhccccccChHHHHHHhcCCC
Q 010972 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (496)
Q Consensus 165 ~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~ 244 (496)
+++|++.++++|++|++|++|++|..++ +++ |.++|+++.||.||+|+|++.+.+|++...+ .....+.+.++.+
T Consensus 192 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~-~~~~~~~~~~~~~ 266 (421)
T 3nrn_A 192 IDELERIIMENKGKILTRKEVVEINIEE--KKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYF-DRDYLKQVDSIEP 266 (421)
T ss_dssp HHHHHHHHHTTTCEEESSCCEEEEETTT--TEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGS-CHHHHHHHHTCCC
T ss_pred HHHHHHHHHHCCCEEEcCCeEEEEEEEC--CEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccC-CHHHHHHHhCCCC
Confidence 9999999999999999999999999876 566 6668889999999999999999999974323 1344567788888
Q ss_pred ccEEEEEEEEccCCCCCCCCceeeccCCCCcceEEecccccccCCCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHHhH
Q 010972 245 IDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSK 324 (496)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~~~~~~~~~~~eel~~~vl~~L~~ 324 (496)
.++++++++++++.. + .++++++.+..+.. +...+...+..++++++++.+..... ..++++..+.++++|++
T Consensus 267 ~~~~~v~l~~~~~~~-~-~~~~~~~~~~~~~~-i~~~s~~~p~~ap~G~~~~~~~~~~~----~~~~~~~~~~~~~~L~~ 339 (421)
T 3nrn_A 267 SEGIKFNLAVPGEPR-I-GNTIVFTPGLMING-FNEPSALDKSLAREGYTLIMAHMALK----NGNVKKAIEKGWEELLE 339 (421)
T ss_dssp CCEEEEEEEEESSCS-S-CSSEEECTTSSSCE-EECGGGTCGGGSCTTEEEEEEEEECT----TCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEcCCcc-c-CCeEEEcCCcceee-EeccCCCCCCcCCCCceEEEEEEeec----cccHHHHHHHHHHHHHH
Confidence 889999999998853 2 34555554433222 33345555555544455554433211 12344568999999999
Q ss_pred hcCCCCCCeeEeEEEEeeCCCceeeCCCCcCCCCCCCCCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHH
Q 010972 325 CIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAF 404 (496)
Q Consensus 325 ~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~rp~~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~i 404 (496)
++| . .++. .+.+|+.+.|++.+..... +. .++ +|||+||||+.+..|. .||+|+.||. +||++|
T Consensus 340 ~~p--~-~~~~--~~~~~~~~~p~~~~~~~~~-~~-~~~-~gl~laGd~~~~~~g~-----~~~ga~~sg~---~aA~~l 403 (421)
T 3nrn_A 340 IFP--E-GEPL--LAQVYRDGNPVNRTRAGLH-IE-WPL-NEVLVVGDGYRPPGGI-----EVDGIALGVM---KALEKL 403 (421)
T ss_dssp HCT--T-CEEE--EEEEC-------------C-CC-CCC-SSEEECSTTCCCTTCC-----HHHHHHHHHH---HHHHHT
T ss_pred HcC--C-CeEE--EeeeccCCCCcccccCCCC-CC-CCC-CcEEEECCcccCCCce-----eeehHHHHHH---HHHHHh
Confidence 999 2 2453 4567887777764322111 22 578 9999999999864222 1699999999 999999
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.95 E-value=4.2e-27 Score=246.36 Aligned_cols=363 Identities=14% Similarity=0.062 Sum_probs=243.5
Q ss_pred ccccCCCccHHHHHHHhCCCCCCCcc---c-ceeeccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHH
Q 010972 2 QGFWYPFRNIFSLVDELGIKPFTGWM---K-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLM 77 (496)
Q Consensus 2 H~~~~~y~~~~~Ll~eLGl~~~~~~~---~-~~~~~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~ 77 (496)
|.+...++++.++++++|+.+...+. . ..++..+|+.+ +.|.+...+++.+.+++.++++++.
T Consensus 70 ~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~-----------~~p~~~~~~~~~~~~~~~~~~~~~~-- 136 (478)
T 2ivd_A 70 NSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLR-----------SVPASPPAFLASDILPLGARLRVAG-- 136 (478)
T ss_dssp CCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEE-----------ECCCSHHHHHTCSSSCHHHHHHHHG--
T ss_pred hhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEECCEEE-----------ECCCCHHHhccCCCCCHHHHHHHhh--
Confidence 55667789999999999997533221 1 12222345421 1233333455566778888877543
Q ss_pred HHHhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHh-----------
Q 010972 78 AAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA----------- 146 (496)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~----------- 146 (496)
...+.. ....+++|+.+|+++. ++++..+.++.|++.+.++.+++++|+.+++..+..+...
T Consensus 137 -~~~~~~-----~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (478)
T 2ivd_A 137 -ELFSRR-----APEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRA 209 (478)
T ss_dssp -GGGCCC-----CCTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHH
T ss_pred -hhhcCC-----CCCCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHh
Confidence 111111 1135789999999995 8899999999999999999999999998776555432100
Q ss_pred ----------ccCC----cceEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCeEEe
Q 010972 147 ----------HQKN----FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYS 208 (496)
Q Consensus 147 ----------~~~~----~~~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~~~~ 208 (496)
...+ ....+++||+++ |.++|++.+ |++|++|++|++|..++ +++ .|++ +|+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~-l~~~l~~~l---g~~i~~~~~V~~i~~~~--~~~-~v~~~~~~~g~~~~ 282 (478)
T 2ivd_A 210 QKAQRQAALPAGTAPKLSGALSTFDGGLQV-LIDALAASL---GDAAHVGARVEGLARED--GGW-RLIIEEHGRRAELS 282 (478)
T ss_dssp HHHHTCC----CCSCCCCCCEEEETTCTHH-HHHHHHHHH---GGGEESSEEEEEEECC----CC-EEEEEETTEEEEEE
T ss_pred hhccccccCcccccccccccEEEECCCHHH-HHHHHHHHh---hhhEEcCCEEEEEEecC--CeE-EEEEeecCCCceEE
Confidence 0112 457889999998 889998776 68999999999999876 345 4665 567899
Q ss_pred cCEEEEcCChhhHHHhhccccccChHHHHHHhcCCCccEEEEEEEEccCCCCC-CCCceeecc--CCCCcceEEeccccc
Q 010972 209 AGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGF--GDSLAWTFFDLNKIY 285 (496)
Q Consensus 209 Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~g~--~~~~~~~~~d~s~~~ 285 (496)
||+||+|+|++.+.+|++..+ +...+.++++++.++.++++.++++++.. ..+..+... +....+++++.+. .
T Consensus 283 ad~vV~a~~~~~~~~ll~~l~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~ 358 (478)
T 2ivd_A 283 VAQVVLAAPAHATAKLLRPLD---DALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTT-F 358 (478)
T ss_dssp CSEEEECSCHHHHHHHHTTTC---HHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHH-C
T ss_pred cCEEEECCCHHHHHHHhhccC---HHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEccc-C
Confidence 999999999999999886431 34446778888889999999999987622 112112110 1123344554332 2
Q ss_pred ccCCCCCCcEEEEEeec--CCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCCC----CC
Q 010972 286 DEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYM----MR 359 (496)
Q Consensus 286 ~~~~~~~~~ll~~~~~~--~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~r----p~ 359 (496)
+...+++..++.+.... +..+.+.+++++.+.++++|++++|... .+....+++|+++.+.+.||+.... +.
T Consensus 359 ~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~ 436 (478)
T 2ivd_A 359 PFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVTA--RPSFTRVFRWPLGIPQYNLGHLERVAAIDAA 436 (478)
T ss_dssp GGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEESSCCBCCBTTHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEECCCcccCCCcCHHHHHHHHHHH
Confidence 22222234455443332 2345567899999999999999998753 5666678899998888888863211 11
Q ss_pred CCCCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHcC
Q 010972 360 GFTSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQ 409 (496)
Q Consensus 360 ~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg 409 (496)
..+ ++|||+||+++. + +. |++|+.||. +||++|++.++
T Consensus 437 ~~~-~~~l~~aG~~~~-g-~g------v~gA~~SG~---~aA~~i~~~l~ 474 (478)
T 2ivd_A 437 LQR-LPGLHLIGNAYK-G-VG------LNDCIRNAA---QLADALVAGNT 474 (478)
T ss_dssp HHT-STTEEECSTTTS-C-CS------HHHHHHHHH---HHHHHHCC---
T ss_pred Hhh-CCCEEEEccCCC-C-CC------HHHHHHHHH---HHHHHHHHhhc
Confidence 112 689999999973 2 23 799999999 99999987664
No 8
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.94 E-value=5e-27 Score=247.48 Aligned_cols=371 Identities=11% Similarity=0.079 Sum_probs=242.1
Q ss_pred ccccCCCccHHHHHHHhCCCCCCCccc---ceeeccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHHH
Q 010972 2 QGFWYPFRNIFSLVDELGIKPFTGWMK---SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMA 78 (496)
Q Consensus 2 H~~~~~y~~~~~Ll~eLGl~~~~~~~~---~~~~~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~~ 78 (496)
|.+...++++.++++++|+.+...+.. ..++..+|+. .+.|.+...+++...+++.+|++.+..
T Consensus 67 ~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~-----------~~~p~~~~~~~~~~~~~~~~~~~~~~~-- 133 (504)
T 1sez_A 67 NTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTP-----------VLLPSNPIDLIKSNFLSTGSKLQMLLE-- 133 (504)
T ss_dssp CCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEESSSSE-----------EECCSSHHHHHHSSSSCHHHHHHHHTH--
T ss_pred cccccCcHHHHHHHHHcCCcccceeccCCCceEEEECCeE-----------EECCCCHHHHhccccCCHHHHHHHhHh--
Confidence 667778899999999999986433321 1222245542 123444444556677888888875431
Q ss_pred HHhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHH-------------
Q 010972 79 AVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIIL------------- 145 (496)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~------------- 145 (496)
.+.... ........+++|+.+|++++ ++++..+.++.|++.++++.+++++|+.+++..+.....
T Consensus 134 ~~~~~~-~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~ 211 (504)
T 1sez_A 134 PILWKN-KKLSQVSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSK 211 (504)
T ss_dssp HHHC-----------CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHT
T ss_pred hhccCc-ccccccCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhh
Confidence 111100 00000124679999999986 899999999999999999999999999876554433210
Q ss_pred -hcc---------------CCcceEEecCCchhhhHHHHHHHHHhcC-CEEEcCceeeeEEecCCCCe----EEEEEe--
Q 010972 146 -AHQ---------------KNFDLVWCRGTLREKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCC----ISDVVC-- 202 (496)
Q Consensus 146 -~~~---------------~~~~~~~~~GG~~~~l~~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~g~----v~~V~~-- 202 (496)
... ......+++||+++ |+++|++.+ | ++|++|++|++|..+++ +. .+.|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~-l~~~l~~~l---~~~~i~~~~~V~~I~~~~~-~~~~~~~~~v~~~~ 286 (504)
T 1sez_A 212 LSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQT-LTDAICKDL---REDELRLNSRVLELSCSCT-EDSAIDSWSIISAS 286 (504)
T ss_dssp TC----------CCCSCCSTTCSCBEETTCTHH-HHHHHHTTS---CTTTEETTCCEEEEEEECS-SSSSSCEEEEEEBC
T ss_pred hcccccccccccchhhccccCCceEeeCcHHHH-HHHHHHhhc---ccceEEcCCeEEEEEecCC-CCcccceEEEEEcC
Confidence 000 01236778999997 888888654 5 79999999999998774 31 123555
Q ss_pred -CC---eEEecCEEEEcCChhhHHHhhcc---ccccChHHHHHHhcCCCccEEEEEEEEccCCCCCC-C-CceeeccCC-
Q 010972 203 -GK---ETYSAGAVVLAVGISTLQELIKN---SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-V-SNACSGFGD- 272 (496)
Q Consensus 203 -~G---~~~~Ad~VV~A~p~~~~~~Ll~~---~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~-~-~~~~~g~~~- 272 (496)
+| +++.||+||+|+|++.+.+++.. .+++ ++ .+.++.+.++.++++.|+++.|... . +..+.....
T Consensus 287 ~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~-~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~ 362 (504)
T 1sez_A 287 PHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFL-LN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQ 362 (504)
T ss_dssp SSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCC-CT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGG
T ss_pred CCCccceeEECCEEEECCCHHHHHHHhhcccCCccc-HH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCC
Confidence 34 57899999999999999998842 1121 11 2566777789999999999876311 1 111111010
Q ss_pred ----CCcceEEecccccccCCCCCCcEEEEEee--cCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCc
Q 010972 273 ----SLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSL 346 (496)
Q Consensus 273 ----~~~~~~~d~s~~~~~~~~~~~~ll~~~~~--~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~ 346 (496)
....+++. +...+...+++..++.+... .+..|..++++++++.++++|++++|... ++.+..+.+|+.+.
T Consensus 363 ~~g~~~~~~~~~-s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~--~p~~~~~~~w~~~~ 439 (504)
T 1sez_A 363 QHGLKTLGTLFS-SMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEG--EPTYVNHLYWSKAF 439 (504)
T ss_dssp GGTCCSSEEEEH-HHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCS--CCSSEEEEEEEEEE
T ss_pred CCCCccceEEee-ccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCC--CCeEEEEeECCCCC
Confidence 11222333 23333333223334433222 22356678999999999999999998632 56677889999998
Q ss_pred eeeCCCCcCCCC---CCCCCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHcCC
Q 010972 347 THFFPGSYKYMM---RGFTSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQW 410 (496)
Q Consensus 347 ~~~~pG~~~~rp---~~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg~ 410 (496)
+.+.+|+....+ ...++++|||+||+++.. +. |++|+.||. +||++|++.++.
T Consensus 440 p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g--~~------v~gai~sG~---~aA~~il~~l~~ 495 (504)
T 1sez_A 440 PLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGG--LS------VGKALSSGC---NAADLVISYLES 495 (504)
T ss_dssp ECCCTTHHHHHHHHHHHHHHSTTEEECCSSSSC--SS------HHHHHHHHH---HHHHHHHHHHSS
T ss_pred CccCcCHHHHHHHHHHHHHhCCCEEEEeecCCC--CC------HHHHHHHHH---HHHHHHHHHHhh
Confidence 999998743211 122467999999999862 23 899999999 999999998854
No 9
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.94 E-value=3.6e-26 Score=237.62 Aligned_cols=293 Identities=13% Similarity=0.107 Sum_probs=205.3
Q ss_pred hccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcc-cccHHHHHHHHHHHH-----HhccCCcceEEecCCchhhh
Q 010972 91 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAE-QCSAAATLGILYFII-----LAHQKNFDLVWCRGTLREKI 164 (496)
Q Consensus 91 ~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~-~~Sa~~~~~~l~~~~-----~~~~~~~~~~~~~GG~~~~l 164 (496)
..++++|+.+|+++++.++.+ +.++.+++.+.++.+++ ++|+..++..+.... .. ..+....+++||+++ +
T Consensus 141 ~~~~~~s~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG~~~-l 217 (453)
T 2yg5_A 141 RDLDTVSFKQWLINQSDDAEA-RDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGGMQQ-V 217 (453)
T ss_dssp HHHHSSBHHHHHHHHCSCHHH-HHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTCTHH-H
T ss_pred hhhhhccHHHHHHhhcCCHHH-HHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCChHH-H
Confidence 346789999999998766665 57889999888999999 999988776554310 00 001234678999998 8
Q ss_pred HHHHHHHHHhcCCEEEcCceeeeEEecCCCCe-EEEEEeCCeEEecCEEEEcCChhhHHHhhccccccChHHHHHHhcCC
Q 010972 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCC-ISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLA 243 (496)
Q Consensus 165 ~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~-v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~ 243 (496)
+++|++.+ |++|++|++|++|..++ ++ +. |+++|+++.||+||+|+|++.+.+|+..+.++ ....+.++++.
T Consensus 218 ~~~l~~~l---g~~i~~~~~V~~i~~~~--~~~v~-v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp-~~~~~~i~~~~ 290 (453)
T 2yg5_A 218 SIRMAEAL---GDDVFLNAPVRTVKWNE--SGATV-LADGDIRVEASRVILAVPPNLYSRISYDPPLP-RRQHQMHQHQS 290 (453)
T ss_dssp HHHHHHHH---GGGEECSCCEEEEEEET--TEEEE-EETTTEEEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHGGGEE
T ss_pred HHHHHHhc---CCcEEcCCceEEEEEeC--CceEE-EEECCeEEEcCEEEEcCCHHHHhcCEeCCCCC-HHHHHHHhcCC
Confidence 88888765 78999999999999877 55 54 77788899999999999999988887655442 33345677888
Q ss_pred CccEEEEEEEEccCCCCCCCCc-eeeccCCCCcceEEecccccccCCCCCCcEEEEEee--cCCCCCCCCHHHHHHHHHH
Q 010972 244 SIDVVSVKLWFDKKVTVPNVSN-ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVS 320 (496)
Q Consensus 244 ~~~~~~v~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~--~~~~~~~~~~eel~~~vl~ 320 (496)
+.++.++++.|++++|...... .+...+... .++++.+.. + .+..++.+... .++.|..++++++++.+++
T Consensus 291 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~-~~~~~~~~~-~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 364 (453)
T 2yg5_A 291 LGLVIKVHAVYETPFWREDGLSGTGFGASEVV-QEVYDNTNH-E----DDRGTLVAFVSDEKADAMFELSAEERKATILA 364 (453)
T ss_dssp ECCEEEEEEEESSCGGGGGTEEEEEECTTSSS-CEEEECCCT-T----CSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHH
T ss_pred CcceEEEEEEECCCCCCCCCCCceeecCCCCe-EEEEeCCCC-C----CCCCEEEEEeccHHHHHHhcCCHHHHHHHHHH
Confidence 8889999999999987321111 111112222 335554321 1 11234433222 2345666789999999999
Q ss_pred HHhHhcCCCCCCeeEeEEEEeeCCC-----c--eeeCCCCc-CCCCCCCCCCCCEEEcCCCccC-CCCCCCCCCCCcccc
Q 010972 321 YLSKCIKDFSTATVMDHKIRRFPKS-----L--THFFPGSY-KYMMRGFTSFPNLFMAGDWITT-RHGSWRGLMSPDSKL 391 (496)
Q Consensus 321 ~L~~~~P~~~~~~v~~~~v~~~~~a-----~--~~~~pG~~-~~rp~~~t~i~gL~lAGd~t~~-~~G~~~~~~~megAv 391 (496)
+|++++|.-. .+++...+.+|... . +.+.||.. ..++...+|++||||||+++++ ++|. |+||+
T Consensus 365 ~L~~~~~~~~-~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~------v~gA~ 437 (453)
T 2yg5_A 365 SLARYLGPKA-EEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQH------VDGAV 437 (453)
T ss_dssp HHHHHHCGGG-GCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTS------HHHHH
T ss_pred HHHHHhCccC-CCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccc------hHHHH
Confidence 9999997521 24556667788632 2 23567742 2234566789999999999985 5676 99999
Q ss_pred ccCcChHHHHHHHHHHcC
Q 010972 392 PTGWSTILEMEAFLKLFQ 409 (496)
Q Consensus 392 ~SG~~~~~AA~~il~~lg 409 (496)
.||. +||++|++.++
T Consensus 438 ~SG~---~aA~~i~~~l~ 452 (453)
T 2yg5_A 438 RMGQ---RTAADIIARSK 452 (453)
T ss_dssp HHHH---HHHHHHHHHC-
T ss_pred HHHH---HHHHHHHHHhc
Confidence 9999 99999998764
No 10
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.93 E-value=1.2e-24 Score=228.67 Aligned_cols=295 Identities=12% Similarity=0.060 Sum_probs=207.1
Q ss_pred hhccCCccHHHHHHHhC--CCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH---HhccCCcceEEecCCchhhh
Q 010972 90 WRKYDSITARELFKQFG--CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII---LAHQKNFDLVWCRGTLREKI 164 (496)
Q Consensus 90 ~~~~d~~Sv~~~l~~~~--~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~---~~~~~~~~~~~~~GG~~~~l 164 (496)
+..++++|+.+|+++.+ +++.. +.++.+++...++.+++++|+..++..+.... .........+.++||+++ +
T Consensus 180 ~~~~~~~s~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~-l 257 (495)
T 2vvm_A 180 FRKYDEMSYSERIDQIRDELSLNE-RSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSA-F 257 (495)
T ss_dssp HHHHHTSBHHHHHHHHGGGCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHH-H
T ss_pred hhhhhhhhHHHHHHHhhccCCHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHH-H
Confidence 34567899999999986 77775 68899999999999999999988876654210 000001234668899998 9
Q ss_pred HHHHHHHHHhcC-CEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHHHhhccccccChHHHHHHhcC
Q 010972 165 FEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 242 (496)
Q Consensus 165 ~~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l 242 (496)
+++|.+.+++.| ++|++|++|++|+.++ +++. |++ +|+++.||+||+|+|++.+.+++..+.++ ....+.++.+
T Consensus 258 ~~~l~~~l~~~g~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp-~~~~~ai~~~ 333 (495)
T 2vvm_A 258 ARRFWEEAAGTGRLGYVFGCPVRSVVNER--DAAR-VTARDGREFVAKRVVCTIPLNVLSTIQFSPALS-TERISAMQAG 333 (495)
T ss_dssp HHHHHHHHHTTTCEEEESSCCEEEEEECS--SSEE-EEETTCCEEEEEEEEECCCGGGGGGSEEESCCC-HHHHHHHHHC
T ss_pred HHHHHHHhhhcCceEEEeCCEEEEEEEcC--CEEE-EEECCCCEEEcCEEEECCCHHHHhheeeCCCCC-HHHHHHHHhc
Confidence 999999999888 9999999999999876 4464 666 56689999999999999998886544442 3344567788
Q ss_pred CCccEEEEEEEEccCCCCCCCCceeeccCCCCcceEEecccccccCCCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHH
Q 010972 243 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYL 322 (496)
Q Consensus 243 ~~~~~~~v~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~~~~~~~~~~~eel~~~vl~~L 322 (496)
.+.++.++++.|++++|. .+..+...+.++.+ +++.+.. + ++..++.+ +..... .+++++..+.++++|
T Consensus 334 ~~~~~~kv~l~~~~~~~~--~~~g~~~~~~~~~~-~~~~~~~-~----~~~~vl~~-~~~~~~--~~~~~e~~~~~~~~L 402 (495)
T 2vvm_A 334 HVSMCTKVHAEVDNKDMR--SWTGIAYPFNKLCY-AIGDGTT-P----AGNTHLVC-FGNSAN--HIQPDEDVRETLKAV 402 (495)
T ss_dssp CCCCCEEEEEEESCGGGG--GEEEEECSSCSSCE-EEEEEEC-T----TSCEEEEE-EECSTT--CCCTTTCHHHHHHHH
T ss_pred CCCceeEEEEEECCccCC--CceeEecCCCCcEE-EecCCCC-C----CCCeEEEE-EeCccc--cCCCHHHHHHHHHHH
Confidence 888899999999998762 22222111223323 4432221 1 12344443 333222 145556678899999
Q ss_pred hHhcCCCCCCeeEeEEEEeeC------CCceeeCCCCc-CCCCCCCCCCCCEEEcCCCccC-CCCCCCCCCCCccccccC
Q 010972 323 SKCIKDFSTATVMDHKIRRFP------KSLTHFFPGSY-KYMMRGFTSFPNLFMAGDWITT-RHGSWRGLMSPDSKLPTG 394 (496)
Q Consensus 323 ~~~~P~~~~~~v~~~~v~~~~------~a~~~~~pG~~-~~rp~~~t~i~gL~lAGd~t~~-~~G~~~~~~~megAv~SG 394 (496)
++++|+.. .+....+++|. ++...+.||.. ..++...+|.+||||||+++.+ ++|. ||||+.||
T Consensus 403 ~~~~~~~~--~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~------veGAi~SG 474 (495)
T 2vvm_A 403 GQLAPGTF--GVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSF------IDGAIEEG 474 (495)
T ss_dssp HTTSTTSC--CEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTS------HHHHHHHH
T ss_pred HHhcCCCC--CceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceE------EEhHHHHH
Confidence 99998743 57777778885 23334556653 2233344678999999999986 5566 99999999
Q ss_pred cChHHHHHHHHHHcCCCC
Q 010972 395 WSTILEMEAFLKLFQWRK 412 (496)
Q Consensus 395 ~~~~~AA~~il~~lg~~~ 412 (496)
. +||++|++.++.+.
T Consensus 475 ~---raA~~i~~~l~~~~ 489 (495)
T 2vvm_A 475 T---RAARVVLEELGTKR 489 (495)
T ss_dssp H---HHHHHHHHHHCCC-
T ss_pred H---HHHHHHHHHhcccc
Confidence 9 99999999886443
No 11
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.90 E-value=9.7e-23 Score=214.42 Aligned_cols=290 Identities=10% Similarity=0.061 Sum_probs=158.4
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhccCCcceEEecCCchhhhHHHHHHHHHhc
Q 010972 96 ITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 175 (496)
Q Consensus 96 ~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~l~~aL~~~l~~~ 175 (496)
.|+.+++.++..++.+. .++..... .++.+|.+.++...+ +... .. ....++|+||+++ |+++|++.++++
T Consensus 164 ~~~~~~~~~~~~~~~l~-~~l~~~~~-~~g~~p~~~~~~~~~--~~~~--~~--~~G~~~p~GG~~~-l~~aL~~~~~~~ 234 (501)
T 4dgk_A 164 RSVYSKVASYIEDEHLR-QAFSFHSL-LVGGNPFATSSIYTL--IHAL--ER--EWGVWFPRGGTGA-LVQGMIKLFQDL 234 (501)
T ss_dssp HHHHHHHHTTCCCHHHH-HHHHHHHH-HHHSCC--CCCTHHH--HHHH--HS--CCCEEEETTHHHH-HHHHHHHHHHHT
T ss_pred ccHHHHHHHHhccHHHH-hhhhhhhc-ccCCCcchhhhhhhh--hhhh--hc--cCCeEEeCCCCcc-hHHHHHHHHHHh
Confidence 47888999875566654 44442222 234566666654433 2221 11 2346789999998 999999999999
Q ss_pred CCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhH-HHhhccccccChHHHHHHhcCCC-ccEEEEEE
Q 010972 176 GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL-QELIKNSILCNREEFLKVLNLAS-IDVVSVKL 252 (496)
Q Consensus 176 G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~-~~Ll~~~~~~~~~~~~~l~~l~~-~~~~~v~l 252 (496)
|++|++|++|++|+.++ +++++|++ +|+++.||+||++++++.+ ..|++....+ ......++..++ .+.+++++
T Consensus 235 Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~-~~~~~~~~~~~~~~s~~~~~~ 311 (501)
T 4dgk_A 235 GGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA-VKQSNKLQTKRMSNSLFVLYF 311 (501)
T ss_dssp TCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC----------------------------CCEEEEEEE
T ss_pred CCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc-hhhhhhhhccccCCceeEEEe
Confidence 99999999999999988 78999998 6889999999999988765 5677664331 222345555553 46788999
Q ss_pred EEccCCCCCCCCceeeccCCC--C-----------c-ce-EEecccccccCCCCCCcEEEE-EeecCCCCCCC----CHH
Q 010972 253 WFDKKVTVPNVSNACSGFGDS--L-----------A-WT-FFDLNKIYDEHKDDSATVIQA-DFYHANELMPL----KDD 312 (496)
Q Consensus 253 ~~~~~~~~~~~~~~~~g~~~~--~-----------~-~~-~~d~s~~~~~~~~~~~~ll~~-~~~~~~~~~~~----~~e 312 (496)
+++.+......++++++.+.. . . .+ +...+...+..++++.+.+.+ +..+...+.+. .++
T Consensus 312 ~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~ 391 (501)
T 4dgk_A 312 GLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTVEGP 391 (501)
T ss_dssp EESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHHHHH
T ss_pred cccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHHHHH
Confidence 998876532233444332110 0 0 01 111222334444444444433 22332222222 256
Q ss_pred HHHHHHHHHHhHh-cCCCCCCeeEeEEEEe----------eCCCceeeCCCC---cCCCCCC-CCCCCCEEEcCCCccCC
Q 010972 313 QVVAKAVSYLSKC-IKDFSTATVMDHKIRR----------FPKSLTHFFPGS---YKYMMRG-FTSFPNLFMAGDWITTR 377 (496)
Q Consensus 313 el~~~vl~~L~~~-~P~~~~~~v~~~~v~~----------~~~a~~~~~pG~---~~~rp~~-~t~i~gL~lAGd~t~~~ 377 (496)
++.+.+++.|++. +|++++ .++...+.. +.+++++..+.. ...||.. .+|++|||+||++|+++
T Consensus 392 ~~~~~vl~~l~~~~~P~~~~-~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG 470 (501)
T 4dgk_A 392 KLRDRIFAYLEQHYMPGLRS-QLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPG 470 (501)
T ss_dssp HHHHHHHHHHHHHTCTTHHH-HEEEEEEECTTTTC------------------------------CCTTEEECCCH----
T ss_pred HHHHHHHHHHHHhhCCChHH-ceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCCCc
Confidence 7888999999875 599875 566555431 123344433321 2346654 37899999999999975
Q ss_pred CCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 378 HGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 378 ~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
.| ++||+.||+ +||++||++|
T Consensus 471 ~G-------v~ga~~SG~---~aA~~il~dL 491 (501)
T 4dgk_A 471 AG-------IPGVIGSAK---ATAGLMLEDL 491 (501)
T ss_dssp ---------HHHHHHHHH---HHHHHHHHHH
T ss_pred cc-------HHHHHHHHH---HHHHHHHHHh
Confidence 44 689999999 9999999998
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.88 E-value=1.8e-22 Score=212.81 Aligned_cols=363 Identities=12% Similarity=0.089 Sum_probs=230.7
Q ss_pred CccccCCCccHHHHHHHhCCCCCCCcc--c-ceeeccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhh-H
Q 010972 1 MQGFWYPFRNIFSLVDELGIKPFTGWM--K-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLP-L 76 (496)
Q Consensus 1 ~H~~~~~y~~~~~Ll~eLGl~~~~~~~--~-~~~~~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~-~ 76 (496)
.|.|++.++++.+|++++|........ + ..++ .+|+. ++.|+... ...++..++.+... +
T Consensus 65 ~h~~~~~~~~v~~l~~e~~~~~~~~~~~~~~~~i~-~~g~~-----------~~~p~~~~----~~~~~~~~~~~~~~~~ 128 (513)
T 4gde_A 65 GHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVR-CQGQW-----------VPYPFQNN----ISMLPKEEQVKCIDGM 128 (513)
T ss_dssp CCCCCCCBHHHHHHHHHHSCSGGGEEEEECCEEEE-ETTEE-----------EESSGGGG----GGGSCHHHHHHHHHHH
T ss_pred ceEecCCCHHHHHHHHHhCCccceeEEecCceEEE-ECCeE-----------eecchhhh----hhhcchhhHHHHHHHH
Confidence 388999999999999999886432111 1 2233 35542 12343211 11234444444322 1
Q ss_pred HHHHhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHH---------HHHHHHHhc
Q 010972 77 MAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLG---------ILYFIILAH 147 (496)
Q Consensus 77 ~~~~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~---------~l~~~~~~~ 147 (496)
+..... ......+..|+.+|+.+. +++++.+.++.|++.++++.+++++|+.++.. .+.......
T Consensus 129 ~~~~~~-----~~~~~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~ 202 (513)
T 4gde_A 129 IDAALE-----ARVANTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGK 202 (513)
T ss_dssp HHHHHH-----HHTCCSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTC
T ss_pred HHHHHh-----hhcccccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcc
Confidence 111111 111234678999999985 89999999999999999999999999764421 111111111
Q ss_pred cC-----CcceEE-ecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhH
Q 010972 148 QK-----NFDLVW-CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 221 (496)
Q Consensus 148 ~~-----~~~~~~-~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~ 221 (496)
.. ...+.+ ++||+++ ++++|++.+++.|++|++|++|++|..++ ++++ ..+|+++.||+||+|+|++.+
T Consensus 203 ~~~~~~~~~~~~~~~~gG~~~-l~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~~v~--~~~G~~~~ad~vI~t~P~~~l 277 (513)
T 4gde_A 203 TAGNWGPNATFRFPARGGTGG-IWIAVANTLPKEKTRFGEKGKVTKVNANN--KTVT--LQDGTTIGYKKLVSTMAVDFL 277 (513)
T ss_dssp CCCSCBTTBEEEEESSSHHHH-HHHHHHHTSCGGGEEESGGGCEEEEETTT--TEEE--ETTSCEEEEEEEEECSCHHHH
T ss_pred cccccccccceeecccCCHHH-HHHHHHHHHHhcCeeeecceEEEEEEccC--CEEE--EcCCCEEECCEEEECCCHHHH
Confidence 11 112334 4799998 99999999999999999999999999876 5442 347889999999999999999
Q ss_pred HHhhccccccChHHHHHHhcCCCccEEEEEEEEccCCCCC-CCCceeeccCCC--CcceEEeccccccc-----------
Q 010972 222 QELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGFGDS--LAWTFFDLNKIYDE----------- 287 (496)
Q Consensus 222 ~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~g~~~~--~~~~~~d~s~~~~~----------- 287 (496)
.+++.... .......++|.++.+|.+.++.+.... .+...++-.+.. +.. +...+...+.
T Consensus 278 ~~~l~~~~-----~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~R-i~~~~n~sp~~~p~~~~~~~~ 351 (513)
T 4gde_A 278 AEAMNDQE-----LVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYR-ATIFSNYSPYNQPEASAALPT 351 (513)
T ss_dssp HHHTTCHH-----HHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSE-EECGGGTCGGGSCCTTCCEEC
T ss_pred HHhcCchh-----hHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeE-EEecCCCCcccCCCCCceEEE
Confidence 99887532 223557788889889999987654311 111112111111 100 1111111111
Q ss_pred ----------CCCCCCcEEEEEee--cCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcC
Q 010972 288 ----------HKDDSATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYK 355 (496)
Q Consensus 288 ----------~~~~~~~ll~~~~~--~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~ 355 (496)
..+++..++...+. ..++...++++++++.++++|.++.+......++..++.||+.++|+|..|+..
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~ 431 (513)
T 4gde_A 352 MQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREG 431 (513)
T ss_dssp CEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHH
T ss_pred EEeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHH
Confidence 01011111111111 234556789999999999999999865444578899999999999999998753
Q ss_pred C----CCCCCCCCCCEEEcCCCccCCCCCCCCC-CCCccccccCcChHHHHHHHHH
Q 010972 356 Y----MMRGFTSFPNLFMAGDWITTRHGSWRGL-MSPDSKLPTGWSTILEMEAFLK 406 (496)
Q Consensus 356 ~----rp~~~t~i~gL~lAGd~t~~~~G~~~~~-~~megAv~SG~~~~~AA~~il~ 406 (496)
. ++..+. +|||++|-. |.|..+ ..||+|++||. .||+.|+.
T Consensus 432 ~~~~~~~~l~~--~~l~~~GR~-----g~~~Y~~~n~D~a~~~g~---~aa~~I~~ 477 (513)
T 4gde_A 432 TLTQILPKLQD--KDIWSRGRF-----GSWRYEVGNQDHSFMLGV---EAVDNIVN 477 (513)
T ss_dssp HHHHHHHHHHH--TTEEECSTT-----TTCCGGGCSHHHHHHHHH---HHHHHHHH
T ss_pred HHHHHHHHHhh--cCcEEecCC-----cccCcCCCCHHHHHHHHH---HHHHHHHc
Confidence 2 222222 699999963 334322 23899999999 99999996
No 13
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.88 E-value=1e-22 Score=213.06 Aligned_cols=360 Identities=12% Similarity=0.029 Sum_probs=229.1
Q ss_pred ccccCCCccHHHHHHHhCCCCCCCccc-ceeeccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhh-HHHH
Q 010972 2 QGFWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLP-LMAA 79 (496)
Q Consensus 2 H~~~~~y~~~~~Ll~eLGl~~~~~~~~-~~~~~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~-~~~~ 79 (496)
|.++..++.+.+|+++++ ++...... ..++ .+|+. .+.|++.. ...++..++++++. ++..
T Consensus 65 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~-~~g~~-----------~~~P~~~~----~~~l~~~~~~~~~~~ll~~ 127 (484)
T 4dsg_A 65 HVIFSHYQYFDDVMDWAV-QGWNVLQRESWVW-VRGRW-----------VPYPFQNN----IHRLPEQDRKRCLDELVRS 127 (484)
T ss_dssp CCBCCSBHHHHHHHHHHC-SCEEEEECCCEEE-ETTEE-----------EESSGGGC----GGGSCHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHh-hhhhhccCceEEE-ECCEE-----------EEeCccch----hhhCCHHHHHHHHHHHHHH
Confidence 678888999999999986 32211111 1222 35542 12343211 12356666665443 2221
Q ss_pred HhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHH---------HHHHHHHHHhcc--
Q 010972 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAAT---------LGILYFIILAHQ-- 148 (496)
Q Consensus 80 ~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~---------~~~l~~~~~~~~-- 148 (496)
..+ ....+++|+++|++++ +++++++.++.|++.++|+.+++++|+.++ ..+++..+....
T Consensus 128 ~~~-------~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~ 199 (484)
T 4dsg_A 128 HAR-------TYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDL 199 (484)
T ss_dssp HHC-------CCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCC
T ss_pred Hhc-------cCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhccccc
Confidence 111 1124789999999997 899999999999999999999999998642 223333321111
Q ss_pred ---CCcceEEec-CCchhhhHHHHHHHHHhcCCEEEcC--ceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHH
Q 010972 149 ---KNFDLVWCR-GTLREKIFEPWMDSMRTRGCEFLDG--RRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQ 222 (496)
Q Consensus 149 ---~~~~~~~~~-GG~~~~l~~aL~~~l~~~G~~I~l~--~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~ 222 (496)
....+.||. ||+++ ++++|++.+.+ .+|++| ++|++|..++ ++|+ ..+|+++.||+||+|+|++.+.
T Consensus 200 ~~~~~~~f~yp~~gG~~~-l~~~la~~l~~--~~i~~~~~~~V~~I~~~~--~~v~--~~~G~~~~ad~VI~a~p~~~~~ 272 (484)
T 4dsg_A 200 GWGPNATFRFPQRGGTGI-IYQAIKEKLPS--EKLTFNSGFQAIAIDADA--KTIT--FSNGEVVSYDYLISTVPFDNLL 272 (484)
T ss_dssp CCSTTSEEEEESSSCTHH-HHHHHHHHSCG--GGEEECGGGCEEEEETTT--TEEE--ETTSCEEECSEEEECSCHHHHH
T ss_pred CCCccceEEeecCCCHHH-HHHHHHhhhhh--CeEEECCCceeEEEEecC--CEEE--ECCCCEEECCEEEECCCHHHHH
Confidence 122456775 89998 89999887743 289999 5699999876 5443 2467789999999999999999
Q ss_pred Hhhcc--ccccChHHHHHHhcCCCccEEEEEEEEccCCCCC-CCCceeeccCC--CCcceEEecccccccCCCCCCcEEE
Q 010972 223 ELIKN--SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGFGD--SLAWTFFDLNKIYDEHKDDSATVIQ 297 (496)
Q Consensus 223 ~Ll~~--~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~g~~~--~~~~~~~d~s~~~~~~~~~~~~ll~ 297 (496)
+++.. +.+ .+...+.+..++|.++.+++++++++.... .+...++-.+. .... +...+...+..++++.+++.
T Consensus 273 ~ll~~~~~~~-~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~r-i~~~s~~~p~~ap~g~~~l~ 350 (484)
T 4dsg_A 273 RMTKGTGFKG-YDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYR-ATVFSNYSKYNVPEGHWSLM 350 (484)
T ss_dssp HHEECSSCTT-GGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSE-EECGGGTCGGGSCTTEEEEE
T ss_pred HHhhccCCCC-CHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEE-EEeecCCCcccCCCCeEEEE
Confidence 99865 111 133445678899999999999999874311 11222322222 1122 22234444443433344444
Q ss_pred EEeecCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCC----CCCCCCCCCCEEEcCCC
Q 010972 298 ADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDW 373 (496)
Q Consensus 298 ~~~~~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~----rp~~~t~i~gL~lAGd~ 373 (496)
+-+... +.+..+++++++.++++|+++..--.+..+...++.+|+.+.|.+.+|+... +.... .. ||+++|.+
T Consensus 351 ~e~~~~-~~~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~-~~-~l~~~Gr~ 427 (484)
T 4dsg_A 351 LEVSES-KYKPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELM-SR-CIYSRGRF 427 (484)
T ss_dssp EEEEEB-TTBCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH-HT-TEEECSTT
T ss_pred EEEecC-cCCcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHH-hC-CcEeecCC
Confidence 434333 3446789999999999999985321222456667899999999999997532 11111 23 99999984
Q ss_pred ccCCCCCCCCCCCCccccccCcChHHHHHHHH
Q 010972 374 ITTRHGSWRGLMSPDSKLPTGWSTILEMEAFL 405 (496)
Q Consensus 374 t~~~~G~~~~~~~megAv~SG~~~~~AA~~il 405 (496)
-.-..| + ..|+.|+.||. .||++|+
T Consensus 428 g~~~y~-v---~~~d~~i~sg~---~aa~~i~ 452 (484)
T 4dsg_A 428 GAWRYE-V---GNQDHSFMQGV---EAIDHVL 452 (484)
T ss_dssp TTCCGG-G---CSHHHHHHHHH---HHHHHHT
T ss_pred cccccC-C---CChHHHHHHHH---HHHHHHH
Confidence 321111 1 12899999999 9999997
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.86 E-value=1.6e-21 Score=203.66 Aligned_cols=298 Identities=11% Similarity=0.088 Sum_probs=190.5
Q ss_pred cCCccHHH--HHHHhCC--CHHHHHHHHHHHHH-hhcCCCcccccHHHHHHHHHHHHHhccCCcceEEecCCchhhhHHH
Q 010972 93 YDSITARE--LFKQFGC--SERLYRNVIGPLVQ-VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEP 167 (496)
Q Consensus 93 ~d~~Sv~~--~l~~~~~--~~~~~~~l~~pl~~-~~~~~~p~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~l~~a 167 (496)
.+++|+.+ |+.+... .....+.++++++. ..++.+++..|+..+... ..+. .......+.+++||++. +.++
T Consensus 135 ~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~-~~~~~~~~~~~~gG~~~-l~~~ 211 (472)
T 1b37_A 135 RDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATFS-DFGDDVYFVADQRGYEA-VVYY 211 (472)
T ss_dssp TTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHHH-HHCSEEEEECCTTCTTH-HHHH
T ss_pred chhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-cccc-ccCCceeeeecCCcHHH-HHHH
Confidence 46778764 6665421 11223556666653 335667777775432211 1110 11111122334799998 8899
Q ss_pred HHHHHHhc--------CCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHHHhhc--cccccChHHH
Q 010972 168 WMDSMRTR--------GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIK--NSILCNREEF 236 (496)
Q Consensus 168 L~~~l~~~--------G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~~Ll~--~~~~~~~~~~ 236 (496)
|++.+.+. |++|++|++|++|..++ +++. |++ +|+++.||+||+|+|++.+.+++. .+.++ ....
T Consensus 212 l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp-~~~~ 287 (472)
T 1b37_A 212 LAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP--GGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLP-TWKV 287 (472)
T ss_dssp HHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS--SCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCC-HHHH
T ss_pred HHHhccccccccccccccEEEcCCEEEEEEEcC--CcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCC-HHHH
Confidence 98887654 67999999999999887 4565 777 577899999999999999987642 23332 3344
Q ss_pred HHHhcCCCccEEEEEEEEccCCCCCCCCceeecc-C--CCCcceEEecccccccCCCCCCcEEEEEeec--CCCCCCCCH
Q 010972 237 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGF-G--DSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKD 311 (496)
Q Consensus 237 ~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~-~--~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~~--~~~~~~~~~ 311 (496)
+.++++.+.++.++++.|++++|.......++.. + ..... ++.. ..+. . |++.++.+.+.. +..|..+++
T Consensus 288 ~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~-p~~~~l~~~~~~~~a~~~~~~~~ 362 (472)
T 1b37_A 288 RAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYG-VWQE--FEKQ-Y-PDANVLLVTVTDEESRRIEQQSD 362 (472)
T ss_dssp HHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSC-EEEE--CTTT-S-TTCCEEEEEEEHHHHHHHHTSCH
T ss_pred HHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccce-eeec--ccCC-C-CCCCEEEEEechHHHHHHHhCCH
Confidence 6678888888899999999998832111111111 1 11112 2221 1111 1 344555443332 234556789
Q ss_pred HHHHHHHHHHHhHhcCCCCCCeeEeEEEEee------CCCceeeCCCCcC-CCCCCCCCCCCEEEcCCCccC-CCCCCCC
Q 010972 312 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRF------PKSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITT-RHGSWRG 383 (496)
Q Consensus 312 eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~------~~a~~~~~pG~~~-~rp~~~t~i~gL~lAGd~t~~-~~G~~~~ 383 (496)
+++.+.++++|++++|+....+++...+.+| .++...+.||+.. .++..++|++||||||+++++ ++|.
T Consensus 363 ~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~--- 439 (472)
T 1b37_A 363 EQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGY--- 439 (472)
T ss_dssp HHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTS---
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCc---
Confidence 9999999999999998753224556666777 3344445667642 233456789999999999987 5666
Q ss_pred CCCCccccccCcChHHHHHHHHHHcCCC
Q 010972 384 LMSPDSKLPTGWSTILEMEAFLKLFQWR 411 (496)
Q Consensus 384 ~~~megAv~SG~~~~~AA~~il~~lg~~ 411 (496)
|+||+.||. +||++|++.++..
T Consensus 440 ---v~GA~~SG~---~aA~~i~~~l~~~ 461 (472)
T 1b37_A 440 ---VHGAYLSGI---DSAEILINCAQKK 461 (472)
T ss_dssp ---HHHHHHHHH---HHHHHHHHHHHHC
T ss_pred ---hhHHHHHHH---HHHHHHHHHHHhC
Confidence 999999999 9999999987533
No 15
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.84 E-value=2.6e-20 Score=186.15 Aligned_cols=228 Identities=11% Similarity=0.105 Sum_probs=160.0
Q ss_pred EEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHHHhhccc--cc
Q 010972 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNS--IL 230 (496)
Q Consensus 154 ~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~~Ll~~~--~~ 230 (496)
....+|++. +.+++++.+ |++|++|++|++|+.++ +++. |++ +|+++.||.||+|+|++.+.+|+... .+
T Consensus 105 ~~~~~g~~~-l~~~l~~~~---g~~i~~~~~V~~i~~~~--~~~~-v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 105 FVAPQGISS-IIKHYLKES---GAEVYFRHRVTQINLRD--DKWE-VSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp EECTTCTTH-HHHHHHHHH---TCEEESSCCEEEEEECS--SSEE-EEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred eecCCCHHH-HHHHHHHhc---CCEEEeCCEEEEEEEcC--CEEE-EEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 445688887 777777655 89999999999999877 4464 666 56678999999999999999998652 22
Q ss_pred cChHHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeeccCCC-CcceEEecccccccCC-CCCCcEEEEEee--cCCCC
Q 010972 231 CNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDS-LAWTFFDLNKIYDEHK-DDSATVIQADFY--HANEL 306 (496)
Q Consensus 231 ~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~d~s~~~~~~~-~~~~~ll~~~~~--~~~~~ 306 (496)
++...+.+.+++|.++.++++.|+++.+.+.+...+...+.. +.|++++ +.. +... ++++.++.+... .++++
T Consensus 178 -~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~k-~~r~~~~~~~~~v~~~~~~~~~~~ 254 (342)
T 3qj4_A 178 -SECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSID-NKK-RNIESSEIGPSLVIHTTVPFGVTY 254 (342)
T ss_dssp -CHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEH-HHH-TTCCCC-CCCEEEEEECHHHHHHT
T ss_pred -CHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEcc-ccC-CCCCCCCCCceEEEECCHHHHHHh
Confidence 123456789999999999999999876543343333322222 3443343 333 2211 123334333222 23456
Q ss_pred CCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCCCCCCC--CCCCCEEEcCCCccCCCCCCCCC
Q 010972 307 MPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF--TSFPNLFMAGDWITTRHGSWRGL 384 (496)
Q Consensus 307 ~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~rp~~~--t~i~gL~lAGd~t~~~~G~~~~~ 384 (496)
.+.+++++.+.++++|++++|... +++++.++||+.+.|++... .++... ...+||++||||+.+ +.
T Consensus 255 ~~~~~~~~~~~~~~~l~~~~g~~~--~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g--~~---- 323 (342)
T 3qj4_A 255 LEHSIEDVQELVFQQLENILPGLP--QPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ--SN---- 323 (342)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCSCC--CCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC--SS----
T ss_pred hcCCHHHHHHHHHHHHHHhccCCC--CCceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC--CC----
Confidence 678999999999999999998554 57888999999999876431 122222 356899999999864 34
Q ss_pred CCCccccccCcChHHHHHHHHHH
Q 010972 385 MSPDSKLPTGWSTILEMEAFLKL 407 (496)
Q Consensus 385 ~~megAv~SG~~~~~AA~~il~~ 407 (496)
+|+|+.||. .||++|++.
T Consensus 324 --v~~ai~sg~---~aa~~i~~~ 341 (342)
T 3qj4_A 324 --FDGCITSAL---CVLEALKNY 341 (342)
T ss_dssp --HHHHHHHHH---HHHHHHTTC
T ss_pred --ccHHHHHHH---HHHHHHHhh
Confidence 899999999 999999764
No 16
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.80 E-value=3.7e-18 Score=175.82 Aligned_cols=276 Identities=14% Similarity=0.098 Sum_probs=184.6
Q ss_pred hccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH---Hh-ccCCcceEEecCCchhhhHH
Q 010972 91 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII---LA-HQKNFDLVWCRGTLREKIFE 166 (496)
Q Consensus 91 ~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~---~~-~~~~~~~~~~~GG~~~~l~~ 166 (496)
..+| .|+.+|+++.+.++.. ..++.+++.+.++.+++++|+..++.++.... .. ... ... .+.+|++. +.+
T Consensus 137 ~~~d-~s~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~-l~~ 211 (431)
T 3k7m_X 137 EDLD-IPLNEYVDKLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLS-LDE-VFSNGSAD-LVD 211 (431)
T ss_dssp GGGC-SBHHHHHHHHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHT-CCE-EETTCTHH-HHH
T ss_pred hhhc-CCHHHHHHhcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecc-hhh-hcCCcHHH-HHH
Confidence 4466 9999999998777765 56778888888999999999988876665320 00 000 111 57888876 555
Q ss_pred HHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHHHhhccccccChHHHHHHhcCCCc
Q 010972 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASI 245 (496)
Q Consensus 167 aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~ 245 (496)
.+. ++.| +|++|++|++|+.++ +++. |++ +|++++||+||+|+|++.+..+...+.++ ....+.+..+.+.
T Consensus 212 ~~~---~~~g-~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~~~ 283 (431)
T 3k7m_X 212 AMS---QEIP-EIRLQTVVTGIDQSG--DVVN-VTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGHGG 283 (431)
T ss_dssp HHH---TTCS-CEESSCCEEEEECSS--SSEE-EEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCCCC
T ss_pred HHH---hhCC-ceEeCCEEEEEEEcC--CeEE-EEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCCCc
Confidence 544 3446 999999999999877 4465 666 56779999999999999998876554442 2333456666777
Q ss_pred cEEEEEEEEccCCCCCCCCceeeccCCCCcceEEecccccccCCCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHHhHh
Q 010972 246 DVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKC 325 (496)
Q Consensus 246 ~~~~v~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~~~~~~~~~~~eel~~~vl~~L~~~ 325 (496)
..+++.+.|+++++. +++.+.......++..... .++.++.. +...+.+...+.+ .+.+.|+++
T Consensus 284 ~~~kv~~~~~~~~~~------i~~~~d~~~~~~~~~~~~~-----~~~~~l~~-~~~g~~~~~~~~~----~~~~~l~~~ 347 (431)
T 3k7m_X 284 QGLKILIHVRGAEAG------IECVGDGIFPTLYDYCEVS-----ESERLLVA-FTDSGSFDPTDIG----AVKDAVLYY 347 (431)
T ss_dssp CEEEEEEEEESCCTT------EEEEBSSSSSEEEEEEECS-----SSEEEEEE-EEETTTCCTTCHH----HHHHHHHHH
T ss_pred ceEEEEEEECCCCcC------ceEcCCCCEEEEEeCcCCC-----CCCeEEEE-EeccccCCCCCHH----HHHHHHHHh
Confidence 788999999988741 3333323233345433210 12333322 3322223333332 456678888
Q ss_pred cCCCCCCeeEeEEEEeeCC------CceeeCCCCc-CCCCCCCCCCCCEEEcCCCccC-CCCCCCCCCCCccccccCcCh
Q 010972 326 IKDFSTATVMDHKIRRFPK------SLTHFFPGSY-KYMMRGFTSFPNLFMAGDWITT-RHGSWRGLMSPDSKLPTGWST 397 (496)
Q Consensus 326 ~P~~~~~~v~~~~v~~~~~------a~~~~~pG~~-~~rp~~~t~i~gL~lAGd~t~~-~~G~~~~~~~megAv~SG~~~ 397 (496)
+|+. .++.....+|.. +...+.||.. ..++....|+++|||||.+|+. ++|. ||||+.||.
T Consensus 348 ~~~~---~~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~------~~GA~~sg~-- 416 (431)
T 3k7m_X 348 LPEV---EVLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGY------IEGALETAE-- 416 (431)
T ss_dssp CTTC---EEEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTS------HHHHHHHHH--
T ss_pred cCCC---CccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeE------ehHHHHHHH--
Confidence 9875 366666677753 2223456653 4456666789999999988886 7777 999999999
Q ss_pred HHHHHHHHHH
Q 010972 398 ILEMEAFLKL 407 (496)
Q Consensus 398 ~~AA~~il~~ 407 (496)
+||++||..
T Consensus 417 -raa~~i~~~ 425 (431)
T 3k7m_X 417 -CAVNAILHS 425 (431)
T ss_dssp -HHHHHHHHC
T ss_pred -HHHHHHHhh
Confidence 999999963
No 17
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.79 E-value=1.3e-18 Score=182.87 Aligned_cols=291 Identities=14% Similarity=0.084 Sum_probs=179.9
Q ss_pred hccCCccHHHHHHHhC-CCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhccCCcceEEecCCchhhhHHHHH
Q 010972 91 RKYDSITARELFKQFG-CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 169 (496)
Q Consensus 91 ~~~d~~Sv~~~l~~~~-~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~l~~aL~ 169 (496)
..+++.|+.+|+++.+ .++..++.+ ..++.... ....+....+.....+ .....+..++||+++ |+++|+
T Consensus 178 ~~~~~~s~~~~l~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~gG~~~-l~~~l~ 248 (498)
T 2iid_A 178 NKYDTYSTKEYLIKEGDLSPGAVDMI-GDLLNEDS---GYYVSFIESLKHDDIF----AYEKRFDEIVDGMDK-LPTAMY 248 (498)
T ss_dssp HHHTTSBHHHHHHHTSCCCHHHHHHH-HHHTTCGG---GTTSBHHHHHHHHHHH----TTCCCEEEETTCTTH-HHHHHH
T ss_pred HHhhhhhHHHHHHHccCCCHHHHHHH-HHhcCccc---chhHHHHHHHHHHhcc----ccCcceEEeCCcHHH-HHHHHH
Confidence 3468899999999865 466665433 22221110 0111211111111111 123356778999997 889998
Q ss_pred HHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCe----EEecCEEEEcCChhhHHHhhccccccChHHHHHHhcCCC
Q 010972 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE----TYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (496)
Q Consensus 170 ~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~----~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~ 244 (496)
+.+.+ +|++|++|++|..++ ++|. |++ +|+ ++.||+||+|+|+..+.++...++++ ....+.++++.+
T Consensus 249 ~~l~~---~i~~~~~V~~I~~~~--~~v~-v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp-~~~~~ai~~l~~ 321 (498)
T 2iid_A 249 RDIQD---KVHFNAQVIKIQQND--QKVT-VVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLL-PKKAHALRSVHY 321 (498)
T ss_dssp HHTGG---GEESSCEEEEEEECS--SCEE-EEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCE
T ss_pred Hhccc---ccccCCEEEEEEECC--CeEE-EEEecCCcccceEEeCEEEECCChHHHhheecCCCCC-HHHHHHHHhCCC
Confidence 87743 899999999999877 4464 655 443 48999999999999887775444442 334466788998
Q ss_pred ccEEEEEEEEccCCCCCCCC-ceeeccCCCCcceEEecccccccCCCCCCcEEEEEee--cCCCCCCCCHHHHHHHHHHH
Q 010972 245 IDVVSVKLWFDKKVTVPNVS-NACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSY 321 (496)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~--~~~~~~~~~~eel~~~vl~~ 321 (496)
.++.++++.|++++|..... ......+.+..++++. +...+ .+..++.+... .+..|..++++++.+.++++
T Consensus 322 ~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s~~~p----~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~ 396 (498)
T 2iid_A 322 RSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYP-NHNFT----NGVGVIIAYGIGDDANFFQALDFKDCADIVFND 396 (498)
T ss_dssp ECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECC-SSCCT----TSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHH
T ss_pred cceeEEEEEeCCCCccCCCccCCcccCCCCcceEEEC-CCCCC----CCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHH
Confidence 89999999999998832110 0111112222232222 21111 22334433222 23457778999999999999
Q ss_pred HhHhcCCCCC---CeeEeEEEEeeCCCc-----ee-eCCCCcC-CCCCCCCCCCCEEEcCCCccCCCCCCCCCCCCcccc
Q 010972 322 LSKCIKDFST---ATVMDHKIRRFPKSL-----TH-FFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWRGLMSPDSKL 391 (496)
Q Consensus 322 L~~~~P~~~~---~~v~~~~v~~~~~a~-----~~-~~pG~~~-~rp~~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv 391 (496)
|+++++.... .......+.+|.... +. +.||... +.+...+|.+||||||+++...+|. |+||+
T Consensus 397 L~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~g~------~~GAi 470 (498)
T 2iid_A 397 LSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGW------IDSTI 470 (498)
T ss_dssp HHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSSSC------HHHHH
T ss_pred HHHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCCcC------HHHHH
Confidence 9999973211 012235567886421 11 2233211 1222345789999999999765676 99999
Q ss_pred ccCcChHHHHHHHHHHcCCC
Q 010972 392 PTGWSTILEMEAFLKLFQWR 411 (496)
Q Consensus 392 ~SG~~~~~AA~~il~~lg~~ 411 (496)
.||. +||++|++.++.+
T Consensus 471 ~SG~---raA~~i~~~l~~~ 487 (498)
T 2iid_A 471 KSGL---RAARDVNLASENP 487 (498)
T ss_dssp HHHH---HHHHHHHHHHHCC
T ss_pred HHHH---HHHHHHHHHhcCC
Confidence 9999 9999999988643
No 18
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.77 E-value=1.4e-18 Score=182.23 Aligned_cols=233 Identities=12% Similarity=0.136 Sum_probs=158.1
Q ss_pred cceEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC---eEEecCEEEEcCChhhHHHhhc
Q 010972 151 FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGISTLQELIK 226 (496)
Q Consensus 151 ~~~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G---~~~~Ad~VV~A~p~~~~~~Ll~ 226 (496)
..+.+++||+++ |+++|++.+.+ ++|++|++|++|..++ ++|. |++ +| +++.||+||+|+|++.+.+|..
T Consensus 229 ~~~~~~~gG~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~ 302 (489)
T 2jae_A 229 MMMFTPVGGMDR-IYYAFQDRIGT--DNIVFGAEVTSMKNVS--EGVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQN 302 (489)
T ss_dssp SSEEEETTCTTH-HHHHHHHHHCG--GGEETTCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEE
T ss_pred ccEEeecCCHHH-HHHHHHHhcCC--CeEEECCEEEEEEEcC--CeEE-EEEecCCeEEEEECCEEEECCCHHHHHhCcc
Confidence 456788999998 99999887732 7899999999999887 5565 655 44 5799999999999998888765
Q ss_pred cccccChHHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeec----cCCCCcceEEecccccccCCCCCCcEEEEEee-
Q 010972 227 NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSG----FGDSLAWTFFDLNKIYDEHKDDSATVIQADFY- 301 (496)
Q Consensus 227 ~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g----~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~- 301 (496)
. + +....+.++++++.++.++++.|++++|.. ... ++| .+.+...+.++ +...+ .+++.++.....
T Consensus 303 ~--l-~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~-~~~-~~g~~~~~~~~~~~~~~~-s~~~~---~~~~~l~~~~~~g 373 (489)
T 2jae_A 303 N--L-PGDVLTALKAAKPSSSGKLGIEYSRRWWET-EDR-IYGGASNTDKDISQIMFP-YDHYN---SDRGVVVAYYSSG 373 (489)
T ss_dssp C--C-CHHHHHHHHTEECCCEEEEEEEESSCHHHH-TTC-CCSCEEEESSTTCEEECC-SSSTT---SSCEEEEEEEEET
T ss_pred C--C-CHHHHHHHHhCCCccceEEEEEeCCCCccC-CCC-cccccccCCCCceEEEeC-CCCCC---CCCCEEEEEeeCC
Confidence 2 2 134446778888999999999999987631 111 221 12223332222 22111 123344432222
Q ss_pred -cCCCCCCCCHHHHHHHHHHHHhHhcCC-CCCCeeEeEEEEeeCCCce------eeC------CCCcC-CCCCCCCCCCC
Q 010972 302 -HANELMPLKDDQVVAKAVSYLSKCIKD-FSTATVMDHKIRRFPKSLT------HFF------PGSYK-YMMRGFTSFPN 366 (496)
Q Consensus 302 -~~~~~~~~~~eel~~~vl~~L~~~~P~-~~~~~v~~~~v~~~~~a~~------~~~------pG~~~-~rp~~~t~i~g 366 (496)
.+..|..++++++++.++++|++++|. +.. ++....+.+|....+ .+. ||... .++...+|.+|
T Consensus 374 ~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~-~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 452 (489)
T 2jae_A 374 KRQEAFESLTHRQRLAKAIAEGSEIHGEKYTR-DISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDK 452 (489)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHHCGGGGS-SEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTT
T ss_pred chhhhhhcCCHHHHHHHHHHHHHHHcCcchhh-hccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCc
Confidence 233466778999999999999999987 543 566667778864422 122 33211 12233467899
Q ss_pred EEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 367 LFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 367 L~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
|||||+++....|. |+||+.||. +||++|++.+
T Consensus 453 l~faG~~~~~~~~~------v~gAi~sg~---~aA~~i~~~l 485 (489)
T 2jae_A 453 IYFAGDHLSNAIAW------QHGALTSAR---DVVTHIHERV 485 (489)
T ss_dssp EEECSGGGBSSTTS------HHHHHHHHH---HHHHHHHHHH
T ss_pred EEEeEHHhccCccH------HHHHHHHHH---HHHHHHHHHH
Confidence 99999998644455 999999999 9999999865
No 19
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.73 E-value=3.5e-17 Score=180.27 Aligned_cols=227 Identities=17% Similarity=0.168 Sum_probs=157.3
Q ss_pred eEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C------CeEEecCEEEEcCChhhHHHhh
Q 010972 153 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI 225 (496)
Q Consensus 153 ~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~------G~~~~Ad~VV~A~p~~~~~~Ll 225 (496)
...++||++. |+++|++ +.+|++|++|++|..++ +.|. |++ + |+++.||+||+|+|+.++++++
T Consensus 564 ~~~~~gG~~~-L~~aLa~-----~l~I~Lnt~V~~I~~~~--~gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~ 634 (852)
T 2xag_A 564 HLTVRNGYSC-VPVALAE-----GLDIKLNTAVRQVRYTA--SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 634 (852)
T ss_dssp CEEETTCTTH-HHHHHTT-----TCCEECSEEEEEEEEET--TEEE-EEEEESSSTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred eEEecCcHHH-HHHHHHh-----CCCEEeCCeEEEEEEcC--CcEE-EEEeecccCCCCeEEECCEEEECCCHHHHHhhh
Confidence 4567899997 7777764 45899999999999987 4454 554 3 4689999999999999998742
Q ss_pred ----ccccccChHHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeeccC------CCCcceEEecccccccCCCCCCcE
Q 010972 226 ----KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG------DSLAWTFFDLNKIYDEHKDDSATV 295 (496)
Q Consensus 226 ----~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~~------~~~~~~~~d~s~~~~~~~~~~~~l 295 (496)
..+.++ ....+.++++.+.++.+|+|.|++++|.. ..+ .+|.. .+..+++|+.. . .. +
T Consensus 635 ~~I~F~P~LP-~~k~~AI~~l~~g~v~KV~L~F~~~fW~~-~~~-~fG~l~~~~~~~~~l~~~~~~~---~-----~p-v 702 (852)
T 2xag_A 635 PAVQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY---K-----AP-I 702 (852)
T ss_dssp CSSEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCC-EEEECCSSSTTTTTTCEEEECS---S-----SS-E
T ss_pred cccccCCCCC-HHHHHHHHcCCccceEEEEEEcCCcccCC-CCC-eeeeeccccCCCCceEEEecCC---C-----CC-E
Confidence 233332 22335678888889999999999999842 222 33321 12233445422 1 12 4
Q ss_pred EEEEee--cCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCC-----ce-eeCCCCcCC------C----
Q 010972 296 IQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS-----LT-HFFPGSYKY------M---- 357 (496)
Q Consensus 296 l~~~~~--~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a-----~~-~~~pG~~~~------r---- 357 (496)
+.+.+. .+..+..++++++++.++++|+++|+.....++....+++|... .| .+.||.... .
T Consensus 703 Ll~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~ 782 (852)
T 2xag_A 703 LLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITP 782 (852)
T ss_dssp EEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCC
T ss_pred EEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcccc
Confidence 433232 23456678999999999999999997643235777788899753 23 345665211 1
Q ss_pred ----CCCCCCCCCEEEcCCCccC-CCCCCCCCCCCccccccCcChHHHHHHHHHHcC
Q 010972 358 ----MRGFTSFPNLFMAGDWITT-RHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQ 409 (496)
Q Consensus 358 ----p~~~t~i~gL~lAGd~t~~-~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg 409 (496)
|...++.++|||||++|+. ++|+ |+||+.||. +||++|++.++
T Consensus 783 ~~~~p~~~~~~grL~FAGE~Ts~~~~gt------veGAi~SG~---RAA~~Il~~l~ 830 (852)
T 2xag_A 783 GPSIPGAPQPIPRLFFAGEHTIRNYPAT------VHGALLSGL---REAGRIADQFL 830 (852)
T ss_dssp CCSSTTCCCCCCCEEECSGGGCTTSTTS------HHHHHHHHH---HHHHHHHHHHH
T ss_pred ccccccccCCCCcEEEEehhHhCCCCcC------HHHHHHHHH---HHHHHHHHHhh
Confidence 1223456899999999986 5666 999999999 99999999874
No 20
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.73 E-value=2.4e-17 Score=178.72 Aligned_cols=227 Identities=17% Similarity=0.173 Sum_probs=154.8
Q ss_pred eEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C------CeEEecCEEEEcCChhhHHHhh
Q 010972 153 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI 225 (496)
Q Consensus 153 ~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~------G~~~~Ad~VV~A~p~~~~~~Ll 225 (496)
...++||+++ |+++|++ +.+|++|++|++|..+++ .|. |++ + |+++.||+||+|+|+..++++.
T Consensus 393 ~~~~~gG~~~-l~~~La~-----~l~I~l~~~V~~I~~~~~--~v~-V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~ 463 (662)
T 2z3y_A 393 HLTVRNGYSC-VPVALAE-----GLDIKLNTAVRQVRYTAS--GCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 463 (662)
T ss_dssp CEEETTCTTH-HHHHHTT-----TCEEETTEEEEEEEEETT--EEE-EEEEESSCTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred eeeecCcHHH-HHHHHHh-----cCceecCCeEEEEEECCC--cEE-EEEeecccCCCCeEEEeCEEEECCCHHHHhccc
Confidence 4567899997 7777764 568999999999999874 454 554 3 4689999999999999998742
Q ss_pred ----ccccccChHHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeeccC-C-----CCcceEEecccccccCCCCCCcE
Q 010972 226 ----KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG-D-----SLAWTFFDLNKIYDEHKDDSATV 295 (496)
Q Consensus 226 ----~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~~-~-----~~~~~~~d~s~~~~~~~~~~~~l 295 (496)
..++++ ....+.++++.+.++.+|++.|++++|.. ..+ .+|.. . +....+++.+ +..+
T Consensus 464 ~~i~f~P~LP-~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~-~~~-~~G~l~~~~~~~~~~~~~~~~~---------~~~v 531 (662)
T 2z3y_A 464 PAVQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY---------KAPI 531 (662)
T ss_dssp CSSEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCS-EEEECCSSSTTTTEEEEEECCS---------SSSE
T ss_pred CceEEcCCCC-HHHHHHHHhCCccceeEEEEEcCcccccC-CCC-ceeeecCCCCCCCceeEEEeCC---------CCCE
Confidence 233332 22345678888899999999999999842 222 33321 1 1112233321 1224
Q ss_pred EEEEee--cCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCC-----cee-eCCCCcCC------CC---
Q 010972 296 IQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS-----LTH-FFPGSYKY------MM--- 358 (496)
Q Consensus 296 l~~~~~--~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a-----~~~-~~pG~~~~------rp--- 358 (496)
+.+.+. .+..+..++++++++.++++|+++++.....++....+++|... .|. +.||.... .|
T Consensus 532 L~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~ 611 (662)
T 2z3y_A 532 LLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITP 611 (662)
T ss_dssp EEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC
T ss_pred EEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcc
Confidence 433232 23446678999999999999999997643235777778888753 233 35664210 11
Q ss_pred -----CCCCCCCCEEEcCCCccC-CCCCCCCCCCCccccccCcChHHHHHHHHHHcC
Q 010972 359 -----RGFTSFPNLFMAGDWITT-RHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQ 409 (496)
Q Consensus 359 -----~~~t~i~gL~lAGd~t~~-~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg 409 (496)
...++.++|||||++|+. .+|. |+||+.||. +||++|++.++
T Consensus 612 ~~~~~~~~~~~grl~FAGe~ts~~~~g~------v~GAi~SG~---raA~~i~~~~~ 659 (662)
T 2z3y_A 612 GPSIPGAPQPIPRLFFAGEHTIRNYPAT------VHGALLSGL---REAGRIADQFL 659 (662)
T ss_dssp ---------CCCCEEECSGGGCTTSTTS------HHHHHHHHH---HHHHHHHHHHT
T ss_pred ccccccccCCCCcEEEEeccccCCCCcC------HHHHHHHHH---HHHHHHHHHcc
Confidence 123456899999999997 5676 999999999 99999998874
No 21
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.73 E-value=2.2e-17 Score=169.73 Aligned_cols=276 Identities=13% Similarity=0.132 Sum_probs=165.0
Q ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH-HhccCCcceEEecCCchhhhHHHHHHH
Q 010972 93 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII-LAHQKNFDLVWCRGTLREKIFEPWMDS 171 (496)
Q Consensus 93 ~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~-~~~~~~~~~~~~~GG~~~~l~~aL~~~ 171 (496)
.+++|+.+|+++++.+ .+.+.+..|++.+.++ +++++|+.+++.++.... ..... ...+.+.||+++ ++++|.+.
T Consensus 140 ~~~~s~~~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~-l~~~l~~~ 215 (424)
T 2b9w_A 140 DLMLPFDEFLALNGCE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAK-GDLWTWADGTQA-MFEHLNAT 215 (424)
T ss_dssp GGGSBHHHHHHHTTCG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHH-TCCBCCTTCHHH-HHHHHHHH
T ss_pred hhccCHHHHHHhhCcH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccC-CceEEeCChHHH-HHHHHHHh
Confidence 4579999999998665 4667777788777664 678999887754433210 00011 123457899987 88888765
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHHhhccccccChHHHHHHhcCCCccEEEEE
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVK 251 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~ 251 (496)
+ +.+|++|++|++|..++ +++. |+++++++.||+||+|+|++.+.++++.. ++..+.+.++.+.+.. +.
T Consensus 216 l---~~~v~~~~~V~~i~~~~--~~v~-v~~~~g~~~ad~Vv~a~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~-~~ 284 (424)
T 2b9w_A 216 L---EHPAERNVDITRITRED--GKVH-IHTTDWDRESDVLVLTVPLEKFLDYSDAD----DDEREYFSKIIHQQYM-VD 284 (424)
T ss_dssp S---SSCCBCSCCEEEEECCT--TCEE-EEESSCEEEESEEEECSCHHHHTTSBCCC----HHHHHHHTTCEEEEEE-EE
T ss_pred h---cceEEcCCEEEEEEEEC--CEEE-EEECCCeEEcCEEEECCCHHHHhhccCCC----HHHHHHHhcCCcceeE-EE
Confidence 5 57899999999999876 4565 77754458999999999999887776532 2233345666655432 33
Q ss_pred EEEccCCCCCCCCceeeccC--C-CCcceEEecccccccCCCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHHhHhcCC
Q 010972 252 LWFDKKVTVPNVSNACSGFG--D-SLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKD 328 (496)
Q Consensus 252 l~~~~~~~~~~~~~~~~g~~--~-~~~~~~~d~s~~~~~~~~~~~~ll~~~~~~~~~~~~~~~eel~~~vl~~L~~~~P~ 328 (496)
+.+....+. ...+++.+ . ...+.+++.....+ ++...+...+......+.+.+++++.+.++++|+++.+.
T Consensus 285 ~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~ 358 (424)
T 2b9w_A 285 ACLVKEYPT---ISGYVPDNMRPERLGHVMVYYHRWAD---DPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHP 358 (424)
T ss_dssp EEEESSCCS---SEEECGGGGSGGGTTSCCEEEECCTT---CTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCC
T ss_pred EEEeccCCc---ccccccCCCCCcCCCcceEEeeecCC---CCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCc
Confidence 333333321 11222211 0 11122333222211 122223333333344566678999999999999996543
Q ss_pred CCCCeeEeEEEEeeCC----CceeeCCCCcCCCCCCCCCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHH
Q 010972 329 FSTATVMDHKIRRFPK----SLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAF 404 (496)
Q Consensus 329 ~~~~~v~~~~v~~~~~----a~~~~~pG~~~~rp~~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~i 404 (496)
.. +++. ...|.. +...+..|+... .....+.+||||||+|+. .|. +|+|+.||. +||+++
T Consensus 359 ~~--~~~~--~~~w~~~p~~~~~~~~~G~~~~-~~~~~~~~~l~~aG~~~~--~g~------~e~a~~Sg~---~aA~~~ 422 (424)
T 2b9w_A 359 VE--KIIE--EQTWYYFPHVSSEDYKAGWYEK-VEGMQGRRNTFYAGEIMS--FGN------FDEVCHYSK---DLVTRF 422 (424)
T ss_dssp EE--EEEE--EEEEEEEEECCHHHHHTTHHHH-HHHTTTGGGEEECSGGGS--CSS------HHHHHHHHH---HHHHHH
T ss_pred cc--cccc--ccceeeeeccCHHHHhccHHHH-HHHHhCCCCceEeccccc--ccc------HHHHHHHHH---HHHHHh
Confidence 22 2222 123321 111223333211 111234679999999886 476 999999999 999988
Q ss_pred H
Q 010972 405 L 405 (496)
Q Consensus 405 l 405 (496)
+
T Consensus 423 l 423 (424)
T 2b9w_A 423 F 423 (424)
T ss_dssp T
T ss_pred c
Confidence 5
No 22
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.67 E-value=3e-16 Score=165.56 Aligned_cols=293 Identities=11% Similarity=0.057 Sum_probs=166.5
Q ss_pred cCCccHHHHHHHh------CCCHHHHHHHHHHHHH---hhcCCCcccccHHHHHHHHHHHHHhccCCcceEEecCCchhh
Q 010972 93 YDSITARELFKQF------GCSERLYRNVIGPLVQ---VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREK 163 (496)
Q Consensus 93 ~d~~Sv~~~l~~~------~~~~~~~~~l~~pl~~---~~~~~~p~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~ 163 (496)
.+++|+.+|+.++ .+++.. ..++.+++. ..++.+++++|+..++. . ......+++| +++
T Consensus 136 ~~d~s~~~~l~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~~-------~--~~~~~~~~~g-~~~- 203 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLLSAKDTYF-------G--HQGRNAFALN-YDS- 203 (516)
T ss_dssp --CCBHHHHHHHHHHHHGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTSBHHHHCC-------C--CSSCCEEESC-HHH-
T ss_pred CCCCCHHHHHHHHHHHhhcccCHHH-HHHHHHHHHHHHHHhCCChHHCChHHHHh-------h--ccCcchhhhC-HHH-
Confidence 4679999998763 122222 123333332 23466788888765421 1 1122346677 776
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHHHh-----------hcccccc
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQEL-----------IKNSILC 231 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~~L-----------l~~~~~~ 231 (496)
++++|++.+. +++|++|++|++|..+++ +.| .|++ +|+++.||+||+|+|+..++.. ...+++
T Consensus 204 l~~~l~~~l~--~~~i~~~~~V~~I~~~~~-~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~L- 278 (516)
T 1rsg_A 204 VVQRIAQSFP--QNWLKLSCEVKSITREPS-KNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPL- 278 (516)
T ss_dssp HHHHHHTTSC--GGGEETTCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCC-
T ss_pred HHHHHHHhCC--CCEEEECCEEEEEEEcCC-CeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCC-
Confidence 7788876653 368999999999998642 345 4777 5778999999999999998743 222233
Q ss_pred ChHHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeeccCCCCc--ceEEecc---------------------c-c-cc
Q 010972 232 NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLA--WTFFDLN---------------------K-I-YD 286 (496)
Q Consensus 232 ~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~~~~~~--~~~~d~s---------------------~-~-~~ 286 (496)
+....+.++++.+.++.++++.|++++|.... ..+.+...... ...++.+ . . .+
T Consensus 279 p~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (516)
T 1rsg_A 279 KPVIQDAFDKIHFGALGKVIFEFEECCWSNES-SKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQP 357 (516)
T ss_dssp CHHHHHHTTSSCCCCCEEEEEEESSCCSCCSC-SEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSC
T ss_pred CHHHHHHHHhCCCCcceEEEEEeCCCCCCCCC-CcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCc
Confidence 13344677889999999999999999984221 22222111000 0000000 0 0 00
Q ss_pred ----c-CCCCCCcEEEE-Eeec-CCCCCCC--CHHHHHHH---HHHHHhHhcC------CCCCC-------eeE--eEEE
Q 010972 287 ----E-HKDDSATVIQA-DFYH-ANELMPL--KDDQVVAK---AVSYLSKCIK------DFSTA-------TVM--DHKI 339 (496)
Q Consensus 287 ----~-~~~~~~~ll~~-~~~~-~~~~~~~--~~eel~~~---vl~~L~~~~P------~~~~~-------~v~--~~~v 339 (496)
. +..++..++.+ +..+ +..+..+ +++++.+. +++++.++++ ++... .++ ...+
T Consensus 358 ~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~ 437 (516)
T 1rsg_A 358 LFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIV 437 (516)
T ss_dssp EEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEE
T ss_pred eeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEE
Confidence 0 00012233333 2222 1223344 77777654 5566655553 33210 132 5666
Q ss_pred EeeCC-----Ccee-eCCCCcCC--CCCC-CCCCCCEEEcCCCccC-CCCCCCCCCCCccccccCcChHHHHHHHHHHcC
Q 010972 340 RRFPK-----SLTH-FFPGSYKY--MMRG-FTSFPNLFMAGDWITT-RHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQ 409 (496)
Q Consensus 340 ~~~~~-----a~~~-~~pG~~~~--rp~~-~t~i~gL~lAGd~t~~-~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg 409 (496)
++|.. +.|. +.||.... .... ..+.++|||||++|+. .+|. |+||+.||. +||++|++.++
T Consensus 438 ~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~------v~GA~~SG~---raA~~i~~~~~ 508 (516)
T 1rsg_A 438 SNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGC------AYGAWESGR---REATRISDLLK 508 (516)
T ss_dssp CCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTS------HHHHHHHHH---HHHHHHHHHHH
T ss_pred ecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCcc------chhHHHHHH---HHHHHHHHHhh
Confidence 77753 2333 34554211 0111 1356899999999987 6777 999999999 99999999876
Q ss_pred CCC
Q 010972 410 WRK 412 (496)
Q Consensus 410 ~~~ 412 (496)
.++
T Consensus 509 ~~~ 511 (516)
T 1rsg_A 509 LEH 511 (516)
T ss_dssp GGG
T ss_pred hhh
Confidence 554
No 23
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.66 E-value=1.2e-16 Score=174.74 Aligned_cols=230 Identities=16% Similarity=0.142 Sum_probs=152.0
Q ss_pred ceEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHHH--hhccc
Q 010972 152 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQE--LIKNS 228 (496)
Q Consensus 152 ~~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~~--Ll~~~ 228 (496)
.....++|++. +.++++ .|.+|++|++|++|+.++ ++|. |++ +|+++.||+||+|+|+..+++ +...+
T Consensus 525 ~~~~~~~G~~~-l~~aLa-----~gl~I~l~t~V~~I~~~~--~~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P 595 (776)
T 4gut_A 525 DHTLLTPGYSV-IIEKLA-----EGLDIQLKSPVQCIDYSG--DEVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNP 595 (776)
T ss_dssp CEEECTTCTHH-HHHHHH-----TTSCEESSCCEEEEECSS--SSEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEES
T ss_pred CeEEECChHHH-HHHHHH-----hCCcEEcCCeeEEEEEcC--CEEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCC
Confidence 44567788886 666554 377999999999999877 4465 666 577899999999999999875 22233
Q ss_pred cccChHHHHHHhcCCCccEEEEEEEEccCCCCCC-CCceeeccCC------CCcceEEecccccccCCCCCCcEEEEEee
Q 010972 229 ILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-VSNACSGFGD------SLAWTFFDLNKIYDEHKDDSATVIQADFY 301 (496)
Q Consensus 229 ~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~-~~~~~~g~~~------~~~~~~~d~s~~~~~~~~~~~~ll~~~~~ 301 (496)
+++ ....+.++.+.+.++.++++.|++++|... ....++|... ++..++++.+ + ..++.++...+.
T Consensus 596 ~Lp-~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~---p---~g~~~vL~~~i~ 668 (776)
T 4gut_A 596 PLS-EKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD---P---QKKHSVLMSVIA 668 (776)
T ss_dssp CCC-HHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC---T---TSCSCEEEEEEC
T ss_pred CCC-HHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCC---C---CCCceEEEEEec
Confidence 332 333456788888888999999999998321 0111332211 1122334432 1 012334433333
Q ss_pred c--CCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCC-----cee-eCCCCcC-CCCCCCCC-CCCEEEcC
Q 010972 302 H--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS-----LTH-FFPGSYK-YMMRGFTS-FPNLFMAG 371 (496)
Q Consensus 302 ~--~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a-----~~~-~~pG~~~-~rp~~~t~-i~gL~lAG 371 (496)
+ +..+..++++++++.++++|++++|......+....+.+|... .|. ..||... ..+....| .++|||||
T Consensus 669 G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAG 748 (776)
T 4gut_A 669 GEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAG 748 (776)
T ss_dssp THHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECS
T ss_pred chhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEe
Confidence 2 3446678999999999999999998633235667778888632 222 3344321 11122234 47899999
Q ss_pred CCccC-CCCCCCCCCCCccccccCcChHHHHHHHHH
Q 010972 372 DWITT-RHGSWRGLMSPDSKLPTGWSTILEMEAFLK 406 (496)
Q Consensus 372 d~t~~-~~G~~~~~~~megAv~SG~~~~~AA~~il~ 406 (496)
++|+. .+|. |+||+.||. +||++|++
T Consensus 749 E~Ts~~~~gt------veGAi~SG~---RaA~~Ila 775 (776)
T 4gut_A 749 EATNRHFPQT------VTGAYLSGV---REASKIAA 775 (776)
T ss_dssp GGGCSSSCSS------HHHHHHHHH---HHHHHHHC
T ss_pred hhhcCCCCcC------HHHHHHHHH---HHHHHHHh
Confidence 99996 5676 999999999 99999985
No 24
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.65 E-value=2e-15 Score=155.62 Aligned_cols=213 Identities=13% Similarity=0.154 Sum_probs=146.7
Q ss_pred ccccCCCccHHHHHHHhCCCCCCCccc-ceeec-cCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHHHH
Q 010972 2 QGFWYPFRNIFSLVDELGIKPFTGWMK-SAQYS-EEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAA 79 (496)
Q Consensus 2 H~~~~~y~~~~~Ll~eLGl~~~~~~~~-~~~~~-~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~~~ 79 (496)
|.++.++.++.++|.++|+.+...|.. ...|. ..+... ..+......+.|.+...+++.+.+++.||.++.+++..
T Consensus 93 P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~--~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~ 170 (475)
T 3p1w_A 93 PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKG--FLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQY 170 (475)
T ss_dssp CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCC--SSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccc--cccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHH
Confidence 557788999999999999998888875 23332 111000 00000001234666566778999999999999887766
Q ss_pred HhccCCC-hhhhh--ccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH--HhccCCcceE
Q 010972 80 VIDFDNT-DVAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLV 154 (496)
Q Consensus 80 ~~~~~~~-~~~~~--~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~--~~~~~~~~~~ 154 (496)
+.+.... ...++ ++++.|+.+|++++++++.+++.++.++.... ..++.+.|+...+..+..+. +...+++.+.
T Consensus 171 l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~-~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~ 249 (475)
T 3p1w_A 171 VSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYL-NDDYLKQPAYLTLERIKLYMQSISAFGKSPFI 249 (475)
T ss_dssp HHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEE
T ss_pred HHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhc-CCCcccCCHHHHHHHHHHHHHHHhhcCCCceE
Confidence 6654321 22233 24689999999999999998765544433222 22445568776666554442 1223456789
Q ss_pred EecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeC-CeEEecCEEEEcCChh
Q 010972 155 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 219 (496)
Q Consensus 155 ~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~-G~~~~Ad~VV~A~p~~ 219 (496)
||+||+++ |+++|++.+++.|++|++|++|++|..+++ |++++|+++ |+++.||+||++.+..
T Consensus 250 yp~gG~~~-L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 250 YPLYGLGG-IPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp EETTCTTH-HHHHHHHHHHHC--CEESSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred EECCCHHH-HHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECCCcEEECCEEEECCCcc
Confidence 99999998 999999999999999999999999998333 678899984 6789999999998654
No 25
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.61 E-value=5e-16 Score=166.77 Aligned_cols=302 Identities=11% Similarity=0.003 Sum_probs=175.8
Q ss_pred hccCCccH---HHHHHHh-CCCHHHHHHHHHHHHHhhcC-CCcccccHHHHHHHHHHHHHhccCCcceEEecCCchhhhH
Q 010972 91 RKYDSITA---RELFKQF-GCSERLYRNVIGPLVQVGLF-APAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIF 165 (496)
Q Consensus 91 ~~~d~~Sv---~~~l~~~-~~~~~~~~~l~~pl~~~~~~-~~p~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~l~ 165 (496)
.++|+.|+ .+|+++. .++ ..+ .++..+..+..+ .+....|+..++.... . ........+.||+++ |+
T Consensus 279 ~~~d~~S~~~~~~~L~~~~~~s-~~~-~~~~~~~~~~gg~~~~~~~S~le~L~~~~----~-~~~~~~~~i~GG~~~-L~ 350 (721)
T 3ayj_A 279 VAFEKGTLPPVDGVLDVDESIS-YYV-ELFGRFGFGTGGFKPLYNISLVEMMRLIL----W-DYSNEYTLPVTENVE-FI 350 (721)
T ss_dssp HHHHHTSSCCGGGTSCHHHHHH-HHH-HHHHHHCSSSSCCGGGTTBBHHHHHHHHH----T-TTTCEECCSSSSTHH-HH
T ss_pred HhhcccchhHHHHHHHhccccH-HHH-HHHHHHhhccCCCCCccchhHHHHHHHHh----c-CCccceeEECCcHHH-HH
Confidence 35688888 8888641 122 222 222222222222 2345778776655441 1 223456678899997 99
Q ss_pred HHHHHHHHhcCCEEEcCceee--eEEecCCCC-----eEEEEEe--CCe--EEecCEEEEcCChhhHHHhh-----c---
Q 010972 166 EPWMDSMRTRGCEFLDGRRVT--DFIYDEERC-----CISDVVC--GKE--TYSAGAVVLAVGISTLQELI-----K--- 226 (496)
Q Consensus 166 ~aL~~~l~~~G~~I~l~~~V~--~I~~~~~~g-----~v~~V~~--~G~--~~~Ad~VV~A~p~~~~~~Ll-----~--- 226 (496)
++|++.+.. |++|++|++|+ +|..+++++ .|+ |.. +|+ ++.||+||+|+|+..+..++ .
T Consensus 351 ~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~-V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~ 428 (721)
T 3ayj_A 351 RNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQL-LSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAA 428 (721)
T ss_dssp HHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEE-EEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEE
T ss_pred HHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEE-EEEecCCceEEEEcCEEEECCCHHHHhhccccccccccc
Confidence 999988743 67899999999 999876421 254 533 465 78999999999999986422 1
Q ss_pred -------------------ccc-c-c------ChHHHHHHhcCCCccEEEEEEEE-----ccCCCCCCCCc--eeeccCC
Q 010972 227 -------------------NSI-L-C------NREEFLKVLNLASIDVVSVKLWF-----DKKVTVPNVSN--ACSGFGD 272 (496)
Q Consensus 227 -------------------~~~-~-~------~~~~~~~l~~l~~~~~~~v~l~~-----~~~~~~~~~~~--~~~g~~~ 272 (496)
.++ + + .....+.++++.+.+..++.+.| ++|+|...... ...-.|.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~ 508 (721)
T 3ayj_A 429 SQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDS 508 (721)
T ss_dssp EEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETT
T ss_pred cccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCC
Confidence 111 1 1 02334677899999999999999 89988422000 0011122
Q ss_pred CCcceEE-ecccccccCCCCCCcEEEEEeec---CCCC------CCCCHHH-------HHHHHHHHHh--HhcCCCCCC-
Q 010972 273 SLAWTFF-DLNKIYDEHKDDSATVIQADFYH---ANEL------MPLKDDQ-------VVAKAVSYLS--KCIKDFSTA- 332 (496)
Q Consensus 273 ~~~~~~~-d~s~~~~~~~~~~~~ll~~~~~~---~~~~------~~~~~ee-------l~~~vl~~L~--~~~P~~~~~- 332 (496)
++..+++ ...... .+.+++..++.+.|.. +..| ..+++++ +++.++++|+ +++|+....
T Consensus 509 ~~r~~~~~p~p~~~-d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~ 587 (721)
T 3ayj_A 509 GLAASYVVPSPIVE-DGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQ 587 (721)
T ss_dssp TTEEEEEEECSCC-----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCE
T ss_pred CcceEEEeccCccc-ccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccc
Confidence 3222111 100000 1111233344333331 2223 2333444 4899999999 888875410
Q ss_pred ---------e--eEeEEEEeeCC-----CceeeCCCCc-------CCC--CCCCCCCCCEEEcCCCccCCCCCCCCCCCC
Q 010972 333 ---------T--VMDHKIRRFPK-----SLTHFFPGSY-------KYM--MRGFTSFPNLFMAGDWITTRHGSWRGLMSP 387 (496)
Q Consensus 333 ---------~--v~~~~v~~~~~-----a~~~~~pG~~-------~~r--p~~~t~i~gL~lAGd~t~~~~G~~~~~~~m 387 (496)
. +.+...+.|.. +.-.+.||.. .+. .....+.++|||||++++..+|. +
T Consensus 588 ~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~~~GW------i 661 (721)
T 3ayj_A 588 PWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSHLGGW------L 661 (721)
T ss_dssp ECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSSCTTS------H
T ss_pred cchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhccCCce------e
Confidence 1 12234556642 2222456651 111 11224568999999999877776 9
Q ss_pred ccccccCcChHHHHHHHHHHcCCCC
Q 010972 388 DSKLPTGWSTILEMEAFLKLFQWRK 412 (496)
Q Consensus 388 egAv~SG~~~~~AA~~il~~lg~~~ 412 (496)
|||+.||. +||.+|+..++...
T Consensus 662 eGAl~Sa~---~Aa~~i~~~~~~~~ 683 (721)
T 3ayj_A 662 EGAFMSAL---NAVAGLIVRANRGD 683 (721)
T ss_dssp HHHHHHHH---HHHHHHHHHHTTTC
T ss_pred hHHHHHHH---HHHHHHHHHhcCCC
Confidence 99999999 99999999987554
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.57 E-value=5.6e-13 Score=138.09 Aligned_cols=197 Identities=10% Similarity=0.112 Sum_probs=125.2
Q ss_pred CCccHHHHHHHhCCCCCCCcccc-eee-ccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHHHHHhccC
Q 010972 7 PFRNIFSLVDELGIKPFTGWMKS-AQY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (496)
Q Consensus 7 ~y~~~~~Ll~eLGl~~~~~~~~~-~~~-~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~~~~~~~~ 84 (496)
....+.++++++|+.+...+... ..| ..+|+.+ +.|.+....+...++++.+|.++.+++..+.+..
T Consensus 93 ~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~-----------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (453)
T 2bcg_G 93 ANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIY-----------KVPANEIEAISSPLMGIFEKRRMKKFLEWISSYK 161 (453)
T ss_dssp TTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEE-----------ECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCB
T ss_pred cCcHHHHHHHhcCCccceEEEEccceeEEeCCeEE-----------ECCCChHHHHhhhccchhhHHHHHHHHHHHHHhc
Confidence 56789999999999765555431 222 2355421 1233322344566778778877666555544332
Q ss_pred CCh-hhhh--ccCCccHHHHHHHhCCCHHHHHHHHHHHHHh---hcCCCcccccHHHHHHHHHHHHHhccCCcceEEecC
Q 010972 85 NTD-VAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQV---GLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRG 158 (496)
Q Consensus 85 ~~~-~~~~--~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~---~~~~~p~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~G 158 (496)
... ..+. .++..|+.+|+++++.++.+++.+...+... .+...|...++..+..++... .......+.+++|
T Consensus 162 ~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~--~~~~~~~~~~p~g 239 (453)
T 2bcg_G 162 EDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSV--ARYGKSPYLYPMY 239 (453)
T ss_dssp TTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHH--HHHSSCSEEEETT
T ss_pred cCCchhhhccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHH--HhhcCCceEeeCC
Confidence 111 1111 2468999999999888888765332222110 011123333332112222211 1122334568999
Q ss_pred CchhhhHHHHHHHHHhcCCEEEcCceeeeEEec--CCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 159 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 159 G~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~--~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
|+++ ++++|++.+++.|++|++|++|++|..+ + +++++|+++|+++.||+||+|++++
T Consensus 240 G~~~-l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 240 GLGE-LPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKTKLGTFKAPLVIADPTYF 299 (453)
T ss_dssp CTTH-HHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEEEEEEETTEEEECSCEEECGGGC
T ss_pred CHHH-HHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeEEEEEECCeEEECCEEEECCCcc
Confidence 9997 9999999999999999999999999987 5 6787888889999999999999987
No 27
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.57 E-value=4.9e-14 Score=139.75 Aligned_cols=223 Identities=13% Similarity=0.081 Sum_probs=149.0
Q ss_pred ecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEE-ecCEEEEcCChhhHHHhhccccccCh
Q 010972 156 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETY-SAGAVVLAVGISTLQELIKNSILCNR 233 (496)
Q Consensus 156 ~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~-~Ad~VV~A~p~~~~~~Ll~~~~~~~~ 233 (496)
...|+.. +.+.+.+ |.+|+++++|++|+.+++ .+. |++ +|+.+ .||.||+|+|++.+.++++.. +
T Consensus 105 ~~~~~~~-l~~~l~~-----g~~i~~~~~v~~i~~~~~--~~~-v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~----~ 171 (336)
T 1yvv_A 105 GKPGMSA-ITRAMRG-----DMPVSFSCRITEVFRGEE--HWN-LLDAEGQNHGPFSHVIIATPAPQASTLLAAA----P 171 (336)
T ss_dssp ESSCTHH-HHHHHHT-----TCCEECSCCEEEEEECSS--CEE-EEETTSCEEEEESEEEECSCHHHHGGGGTTC----H
T ss_pred cCccHHH-HHHHHHc-----cCcEEecCEEEEEEEeCC--EEE-EEeCCCcCccccCEEEEcCCHHHHHHhhccC----H
Confidence 3467765 5554432 889999999999998873 464 666 46655 499999999999988877542 2
Q ss_pred HHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeeccCCCCcceEEecccccccCCCCCCcEEEEEee--cCCCCCCCCH
Q 010972 234 EEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKD 311 (496)
Q Consensus 234 ~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~--~~~~~~~~~~ 311 (496)
+....+..+.|.++.++.+.++++.+.+. ..++..+.+. .++++.+.. +... +.+..+..... .+..+.++++
T Consensus 172 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~l~~~~~~-p~~~-~~~~~~v~~~~~~~~~~~~~~~~ 246 (336)
T 1yvv_A 172 KLASVVAGVKMDPTWAVALAFETPLQTPM--QGCFVQDSPL-DWLARNRSK-PERD-DTLDTWILHATSQWSRQNLDASR 246 (336)
T ss_dssp HHHHHHTTCCEEEEEEEEEEESSCCSCCC--CEEEECSSSE-EEEEEGGGS-TTCC-CSSEEEEEEECHHHHHHTTTSCH
T ss_pred HHHHHHhhcCccceeEEEEEecCCCCCCC--CeEEeCCCce-eEEEecCcC-CCCC-CCCcEEEEEeCHHHHHHHHhCCH
Confidence 33356778888899999999999876432 2232223233 345664433 2211 11122222222 2345667899
Q ss_pred HHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCCCCCCCCCCCCEEEcCCCccCCCCCCCCCCCCcccc
Q 010972 312 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWRGLMSPDSKL 391 (496)
Q Consensus 312 eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~rp~~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv 391 (496)
+++.+.+++.+.++++... ..+....+.+|..+.+.+..+.... ..+.+||++||||+++ +. |++|+
T Consensus 247 ~~~~~~l~~~l~~~lg~~~-~~p~~~~~~rw~~a~~~~~~~~~~~----~~~~~rl~laGDa~~g--~g------v~~a~ 313 (336)
T 1yvv_A 247 EQVIEHLHGAFAELIDCTM-PAPVFSLAHRWLYARPAGAHEWGAL----SDADLGIYVCGDWCLS--GR------VEGAW 313 (336)
T ss_dssp HHHHHHHHHHHHTTCSSCC-CCCSEEEEEEEEEEEESSCCCCSCE----EETTTTEEECCGGGTT--SS------HHHHH
T ss_pred HHHHHHHHHHHHHHhCCCC-CCCcEEEccccCccCCCCCCCCCee----ecCCCCEEEEecCCCC--CC------HHHHH
Confidence 9999999999999987422 1355567788987766655443211 1345899999999975 34 89999
Q ss_pred ccCcChHHHHHHHHHHcCCCC
Q 010972 392 PTGWSTILEMEAFLKLFQWRK 412 (496)
Q Consensus 392 ~SG~~~~~AA~~il~~lg~~~ 412 (496)
.||+ .+|++|++.++...
T Consensus 314 ~sg~---~lA~~l~~~~~~~~ 331 (336)
T 1yvv_A 314 LSGQ---EAARRLLEHLQLEH 331 (336)
T ss_dssp HHHH---HHHHHHHHHTTC--
T ss_pred HHHH---HHHHHHHHHhhhhh
Confidence 9999 99999999886544
No 28
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.52 E-value=1.5e-13 Score=145.84 Aligned_cols=222 Identities=11% Similarity=0.091 Sum_probs=149.8
Q ss_pred CCccHHHHHHHhCCCCCCCccc-ceeec-cCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHHHHHhccC
Q 010972 7 PFRNIFSLVDELGIKPFTGWMK-SAQYS-EEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (496)
Q Consensus 7 ~y~~~~~Ll~eLGl~~~~~~~~-~~~~~-~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~~~~~~~~ 84 (496)
+...+.+||.++|+.+...|.. ..+|. .+|+. ...|.+...+++.+.+++.+|.++.+++....+..
T Consensus 235 ~~g~lv~LL~~sgV~~yLEFk~v~~~y~~~~G~~-----------~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~ 303 (650)
T 1vg0_A 235 SRGLLIDLLIKSNVSRYAEFKNITRILAFREGTV-----------EQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYE 303 (650)
T ss_dssp SSSHHHHHHHHHTGGGGCCEEECCEEEEESSSSE-----------EECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGG
T ss_pred CCcHHHHHHHHcCCcceeeEEEccceEEecCCCE-----------eECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhc
Confidence 3455899999999988877764 23333 45542 12355655677889999999999888766655543
Q ss_pred CChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHH--hccCCcceEEecCCchh
Q 010972 85 NTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIIL--AHQKNFDLVWCRGTLRE 162 (496)
Q Consensus 85 ~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~--~~~~~~~~~~~~GG~~~ 162 (496)
.....+..++..|+.+|+++++.++.+++.+...+ ++.. .+..++...+..+..+.. ...+...+.|++||+++
T Consensus 304 ~~p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~l--al~~--~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g~ 379 (650)
T 1vg0_A 304 EHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSI--AMTS--ETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGE 379 (650)
T ss_dssp GCHHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHT--TC----CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTTH
T ss_pred cChHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHH--hccC--CCCCchhHHHHHHHHHHHHHHhhccCceEEeCCchhH
Confidence 23334667899999999999988998865554322 2222 222344444332332221 22333578999999998
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHHHhhccccccChHHHHHHhc
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 241 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~ 241 (496)
|+++|++.++..||+|++|++|++|..+++.|++++|++ +|+++.||+||++ +.. ++... ..+
T Consensus 380 -L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~--~~~----lp~~~---------~~~ 443 (650)
T 1vg0_A 380 -LPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIE--DSY----LSENT---------CSR 443 (650)
T ss_dssp -HHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEE--GGG----BCTTT---------TTT
T ss_pred -HHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEC--hhh----cCHhH---------hcc
Confidence 999999999999999999999999998763246888886 5889999999993 221 22110 012
Q ss_pred CCCccEEEEEEEEccCCC
Q 010972 242 LASIDVVSVKLWFDKKVT 259 (496)
Q Consensus 242 l~~~~~~~v~l~~~~~~~ 259 (496)
..+..+..+.+.+++++.
T Consensus 444 ~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 444 VQYRQISRAVLITDGSVL 461 (650)
T ss_dssp CCCEEEEEEEEEESSCSS
T ss_pred ccccceEEEEEEecCCCC
Confidence 234556777788888865
No 29
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.38 E-value=6.6e-12 Score=129.22 Aligned_cols=199 Identities=9% Similarity=0.087 Sum_probs=129.0
Q ss_pred CCccHHHHHHHhCCCCCCCccc-ceee-ccCCccccccccccCCCCCCCcccccccccCCCChhhhhhhhhHHHHHhccC
Q 010972 7 PFRNIFSLVDELGIKPFTGWMK-SAQY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (496)
Q Consensus 7 ~y~~~~~Ll~eLGl~~~~~~~~-~~~~-~~~G~~~~~~~~~~~~~l~~P~~~~~~l~~~~ls~~~kl~~~~~~~~~~~~~ 84 (496)
....+.++++++|+.+...+.. ...| ..+|+.+ +.|.+....+...+.++.+|.++.+++..+.++.
T Consensus 85 ~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~-----------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 153 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIY-----------KVPSTETEALASNLMGMFEKRRFRKFLVFVANFD 153 (433)
T ss_dssp TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEE-----------ECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCC
T ss_pred ccchHHHHHHHcCCccceEEEEeCceEEeeCCEEE-----------ECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhc
Confidence 4457889999999986554443 1122 2455421 1233322234455667777777666555444432
Q ss_pred CChh---hhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHh--ccCCcceEEecCC
Q 010972 85 NTDV---AWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA--HQKNFDLVWCRGT 159 (496)
Q Consensus 85 ~~~~---~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~--~~~~~~~~~~~GG 159 (496)
...+ .+.+++++|+.+|+++++.++.+++.+ ...+....+.++.+.++...+..+..+... ..+...+.+++||
T Consensus 154 ~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG 232 (433)
T 1d5t_A 154 ENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFT-GHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYG 232 (433)
T ss_dssp TTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHHHH-HHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTC
T ss_pred ccCchhccccccccCCHHHHHHHcCCCHHHHHHH-HHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcC
Confidence 1111 112357899999999988888876443 322211222455566655443333333211 1223347799999
Q ss_pred chhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 160 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 160 ~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
+++ ++++|++.+++.|++|++|++|++|..++ +++++|+++|+++.||+||+|++++.
T Consensus 233 ~~~-l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 233 LGE-LPQGFARLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp TTH-HHHHHHHHHHHHTCCCBCSCCCCEEEEET--TEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHH-HHHHHHHHHHHcCCEEECCCEEEEEEEeC--CEEEEEEECCeEEECCEEEECCCCCc
Confidence 987 99999999999999999999999999877 67887888899999999999999874
No 30
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.33 E-value=8.9e-14 Score=140.07 Aligned_cols=201 Identities=11% Similarity=0.010 Sum_probs=126.3
Q ss_pred CccccCCCccHHHHHHHhCCCCCCCcccceeeccCCccccccccccCCCCCCCccccc---ccccCCCChhhhhhhhhHH
Q 010972 1 MQGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF---YTQFSRLPLVDRLTSLPLM 77 (496)
Q Consensus 1 ~H~~~~~y~~~~~Ll~eLGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~P~~~~~---~l~~~~ls~~~kl~~~~~~ 77 (496)
.|+|...+++++++++++|... .+........+|+.+ +.|.+... ++... ++.+.. +++
T Consensus 55 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~g~~~-----------~~p~~~~~~~~l~~~~--~~~~~~---~~l 116 (367)
T 1i8t_A 55 AHIFHTNDKYIWDYVNDLVEFN--RFTNSPLAIYKDKLF-----------NLPFNMNTFHQMWGVK--DPQEAQ---NII 116 (367)
T ss_dssp CCCEEESCHHHHHHHHTTSCBC--CCCCCCEEEETTEEE-----------ESSBSHHHHHHHHCCC--CHHHHH---HHH
T ss_pred CceecCCCHHHHHHHHHhhhhh--hccccceEEECCeEE-----------EcCCCHHHHHHHhccC--CHHHHH---HHH
Confidence 3778888999999999998632 222211122355421 23433221 22111 222221 222
Q ss_pred HHHhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhccC-Ccce-EE
Q 010972 78 AAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VW 155 (496)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~~~-~~~~-~~ 155 (496)
....+ .+...+++|+++|+.++ +++++.+.++.|++.++|+.+|+++|+..+..+.......+.. ...+ ++
T Consensus 117 ~~~~~------~~~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~ 189 (367)
T 1i8t_A 117 NAQKK------KYGDKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGI 189 (367)
T ss_dssp HHHTT------TTCCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEEC
T ss_pred HHHhh------ccCCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcc
Confidence 22211 01124689999999997 8999999999999999999999999987542110000000110 1123 38
Q ss_pred ecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHHhhccccccChHH
Q 010972 156 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREE 235 (496)
Q Consensus 156 ~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~ 235 (496)
|+||+++ ++++|++ |++|++|++|++|. . . + ++.||+||+|+|++.+.++
T Consensus 190 p~gG~~~-l~~~l~~-----g~~i~l~~~V~~i~--~--~-v--------~~~~D~VV~a~p~~~~~~~----------- 239 (367)
T 1i8t_A 190 PVGGYTK-LIEKMLE-----GVDVKLGIDFLKDK--D--S-L--------ASKAHRIIYTGPIDQYFDY----------- 239 (367)
T ss_dssp BTTCHHH-HHHHHHT-----TSEEECSCCGGGSH--H--H-H--------HTTEEEEEECSCHHHHTTT-----------
T ss_pred cCCCHHH-HHHHHhc-----CCEEEeCCceeeec--h--h-h--------hccCCEEEEeccHHHHHHH-----------
Confidence 9999987 7777764 68999999999885 2 2 2 2469999999999876543
Q ss_pred HHHHhcCCCccEEEEEEEEccCC
Q 010972 236 FLKVLNLASIDVVSVKLWFDKKV 258 (496)
Q Consensus 236 ~~~l~~l~~~~~~~v~l~~~~~~ 258 (496)
.+.+++|.++..+.+.++++.
T Consensus 240 --~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 240 --RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp --TTCCCCEEEEEEEEEEESSSC
T ss_pred --hhCCCCCceEEEEEEEecccc
Confidence 123567888888888888764
No 31
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.33 E-value=1.4e-14 Score=147.57 Aligned_cols=204 Identities=9% Similarity=-0.030 Sum_probs=124.8
Q ss_pred ccccCCCccHHHHHHHhCCCCCCCcccceeeccCCccccccccccCCCCCCCccc---ccccccCCCChhhhhhhhhHHH
Q 010972 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGT---LFYTQFSRLPLVDRLTSLPLMA 78 (496)
Q Consensus 2 H~~~~~y~~~~~Ll~eLGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~P~~~---~~~l~~~~ls~~~kl~~~~~~~ 78 (496)
|+|...+++++++++++|+-. .+.....+..+|+.+ +.|.+. ..++... ++ .++++. .+.
T Consensus 65 ~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~G~~~-----------~~p~~~~~~~~l~~~~-~~-~~~~~~--~l~ 127 (399)
T 1v0j_A 65 HLFHTSNKRVWDYVRQFTDFT--DYRHRVFAMHNGQAY-----------QFPMGLGLVSQFFGKY-FT-PEQARQ--LIA 127 (399)
T ss_dssp CCEEESCHHHHHHHTTTCCBC--CCCCCEEEEETTEEE-----------EESSSHHHHHHHHTSC-CC-HHHHHH--HHH
T ss_pred cEEcCCcHHHHHHHHHhhhhh--ccccceEEEECCEEE-----------eCCCCHHHHHHHhccc-CC-HHHHHH--HHH
Confidence 677788999999999999832 222222222356532 123332 1122222 22 233331 111
Q ss_pred HHhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhccC-Ccce-EEe
Q 010972 79 AVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWC 156 (496)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~~~-~~~~-~~~ 156 (496)
..... ....+++|+.+|+++. +++++++.++.|++.++|+.+++++|+.++..+...+...+.. ...+ +++
T Consensus 128 ~~~~~------~~~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p 200 (399)
T 1v0j_A 128 EQAAE------IDTADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLP 200 (399)
T ss_dssp HHGGG------SCTTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECB
T ss_pred HHhhc------cCCCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccc
Confidence 21110 0123678999999985 8999999999999999999999999987652111100001110 1123 388
Q ss_pred cCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEE-ecCEEEEcCChhhHHHhhccccccChHH
Q 010972 157 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETY-SAGAVVLAVGISTLQELIKNSILCNREE 235 (496)
Q Consensus 157 ~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~-~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~ 235 (496)
+||+++ ++++|++ +.|++|++|++|++|.. . | + ++ .||+||+|+|++.+.++.
T Consensus 201 ~gG~~~-l~~~l~~---~~g~~I~l~~~V~~I~~----~-v-----~--~~~~aD~VI~t~p~~~l~~~~---------- 254 (399)
T 1v0j_A 201 TDGYTA-WLQNMAA---DHRIEVRLNTDWFDVRG----Q-L-----R--PGSPAAPVVYTGPLDRYFDYA---------- 254 (399)
T ss_dssp TTHHHH-HHHHHTC---STTEEEECSCCHHHHHH----H-H-----T--TTSTTCCEEECSCHHHHTTTT----------
T ss_pred cccHHH-HHHHHHh---cCCeEEEECCchhhhhh----h-h-----h--hcccCCEEEECCcHHHHHhhh----------
Confidence 999987 7787765 45889999999999952 1 2 1 35 799999999999876551
Q ss_pred HHHHhcCCCccEEEEEEEEccCC
Q 010972 236 FLKVLNLASIDVVSVKLWFDKKV 258 (496)
Q Consensus 236 ~~~l~~l~~~~~~~v~l~~~~~~ 258 (496)
+..++|.++..+.+.++.+.
T Consensus 255 ---l~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 255 ---EGRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp ---TCCCCEEEEEEEEEEESSSC
T ss_pred ---hCCCCcceEEEEEEEEcccc
Confidence 23567777778888887653
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.31 E-value=4.9e-13 Score=135.44 Aligned_cols=196 Identities=9% Similarity=0.008 Sum_probs=123.9
Q ss_pred CccccCCCccHHHHHHHhCCCCCCCcccceeeccCCccccccccccCCCCCCCcccc---cccccCCCChhhhhhhhhHH
Q 010972 1 MQGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTL---FYTQFSRLPLVDRLTSLPLM 77 (496)
Q Consensus 1 ~H~~~~~y~~~~~Ll~eLGl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~P~~~~---~~l~~~~ls~~~kl~~~~~~ 77 (496)
.|+|...+++++++++++|.-. .+........+|+.+ +.|.+.. .++... +++.+..++ +
T Consensus 59 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~g~~~-----------~~P~~~~~~~~l~~~~-~~~~~~~~~---l 121 (384)
T 2bi7_A 59 PHIFHTDNETVWNYVNKHAEMM--PYVNRVKATVNGQVF-----------SLPINLHTINQFFSKT-CSPDEARAL---I 121 (384)
T ss_dssp CCCEEESCHHHHHHHHTTSCEE--ECCCCEEEEETTEEE-----------EESCCHHHHHHHTTCC-CCHHHHHHH---H
T ss_pred ceEECCCCHHHHHHHHHHhhhc--ccccceEEEECCEEE-----------ECCCChhHHHHHhccc-CCHHHHHHH---H
Confidence 4788889999999999999621 111111112355421 1233321 122222 233222212 2
Q ss_pred HHHhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhccC-Ccce-EE
Q 010972 78 AAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VW 155 (496)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~~~-~~~~-~~ 155 (496)
..... .. ..+++|+++|+.++ +++++++.++.|++.++|+.+|+++|+..+..+...+...+.. ...+ ++
T Consensus 122 ~~~~~---~~----~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~ 193 (384)
T 2bi7_A 122 AEKGD---ST----IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGM 193 (384)
T ss_dssp HHHSC---CS----CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEE
T ss_pred HHhhh---cc----CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEE
Confidence 22111 00 24689999999987 8999999999999999999999999987642110000001100 1123 38
Q ss_pred ecCCchhhhHHHHHHHHHhcCCEEEcCceee-eEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHHhhccccccChH
Q 010972 156 CRGTLREKIFEPWMDSMRTRGCEFLDGRRVT-DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNRE 234 (496)
Q Consensus 156 ~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~-~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~ 234 (496)
|+||+++ ++++|++ +.|++|++|++|+ +|.. .||+||+|+|++.+.+++
T Consensus 194 p~gG~~~-l~~~l~~---~~g~~I~l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~--------- 243 (384)
T 2bi7_A 194 PKCGYTQ-MIKSILN---HENIKVDLQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ--------- 243 (384)
T ss_dssp ETTHHHH-HHHHHHC---STTEEEEESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT---------
T ss_pred ECcCHHH-HHHHHHh---cCCCEEEECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh---------
Confidence 9999987 8787765 3588999999999 7731 299999999999877652
Q ss_pred HHHHHhcCCCccEEEEEEEEc
Q 010972 235 EFLKVLNLASIDVVSVKLWFD 255 (496)
Q Consensus 235 ~~~~l~~l~~~~~~~v~l~~~ 255 (496)
+..++|.++..+.+.+|
T Consensus 244 ----lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 244 ----YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ----TCCCCEEEEEEEEEEEE
T ss_pred ----cCCCCcceEEEEEEEeC
Confidence 22467888777788887
No 33
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.95 E-value=5.4e-10 Score=112.88 Aligned_cols=201 Identities=8% Similarity=0.025 Sum_probs=126.6
Q ss_pred ccccCCCccHHHHHHHhCCCCCCCccc-ceeeccCCccccccccccCCCCCCCcccc-cccccCCCChhhhhhhhhHHHH
Q 010972 2 QGFWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTL-FYTQFSRLPLVDRLTSLPLMAA 79 (496)
Q Consensus 2 H~~~~~y~~~~~Ll~eLGl~~~~~~~~-~~~~~~~G~~~~~~~~~~~~~l~~P~~~~-~~l~~~~ls~~~kl~~~~~~~~ 79 (496)
|.|...++.++++++++|... .+.. ..++ .+|+.+ ++|..++.. .++.. .+++.....++. .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~g~l~---------~lP~~~~~~~~l~~~-~~~~~~~~~~l~---~ 148 (397)
T 3hdq_A 85 HIFHTNSKDVFEYLSRFTEWR--PYQHRVLAS-VDGQLL---------PIPINLDTVNRLYGL-NLTSFQVEEFFA---S 148 (397)
T ss_dssp CCCEESCHHHHHHHHTSCCEE--ECCCBEEEE-ETTEEE---------EESCCHHHHHHHHTC-CCCHHHHHHHHH---H
T ss_pred cccCCChHHHHHHHHHhhhcc--cccccceEE-ECCEEE---------EcCCChHHHHHhhcc-CCCHHHHHHHHh---h
Confidence 788889999999999999532 1122 2223 356521 233322211 12222 234433322211 1
Q ss_pred HhccCCChhhhhccCCccHHHHHHHhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhccC-Ccce-EEec
Q 010972 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCR 157 (496)
Q Consensus 80 ~~~~~~~~~~~~~~d~~Sv~~~l~~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~~~-~~~~-~~~~ 157 (496)
. .+...+++|+++|+.++ +++++++.|+.|++.++|+.+++++|+.++..+-......... ...+ ++|+
T Consensus 149 -~-------~~~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~ 219 (397)
T 3hdq_A 149 -V-------AEKVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPL 219 (397)
T ss_dssp -H-------CCCCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEET
T ss_pred -c-------ccCCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccC
Confidence 1 11235789999999985 8999999999999999999999999987543110000000000 1233 4799
Q ss_pred CCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHHhhccccccChHHHH
Q 010972 158 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFL 237 (496)
Q Consensus 158 GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~ 237 (496)
||+++ +.++|+ +..|++|++|++|+++ +.++.+|+||+|+|++.+.+.
T Consensus 220 gGy~~-l~e~l~---~~~g~~V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------- 267 (397)
T 3hdq_A 220 HGYTR-MFQNML---SSPNIKVMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------- 267 (397)
T ss_dssp TCHHH-HHHHHT---CSTTEEEEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT-------------
T ss_pred CCHHH-HHHHHH---hccCCEEEECCeEEec---------------cccccCCEEEEcCCHHHHHHH-------------
Confidence 99987 767664 3568999999999843 123468999999999776321
Q ss_pred HHhcCCCccEEEEEEEEccCCC
Q 010972 238 KVLNLASIDVVSVKLWFDKKVT 259 (496)
Q Consensus 238 ~l~~l~~~~~~~v~l~~~~~~~ 259 (496)
...+++|.++..+.+.++.+..
T Consensus 268 ~~g~L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 268 CYGKLPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp TTCCCCEEEEEEEEEEESSSCS
T ss_pred hcCCCCCceEEEEEEEeccccC
Confidence 1235678888888889986543
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.65 E-value=2.8e-09 Score=95.77 Aligned_cols=97 Identities=10% Similarity=0.120 Sum_probs=72.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhHhc-CCCCCCeeEeE--EEEeeCC-----Ccee-eCCCCc-CCCCCCCCCCCCEEEcCC
Q 010972 303 ANELMPLKDDQVVAKAVSYLSKCI-KDFSTATVMDH--KIRRFPK-----SLTH-FFPGSY-KYMMRGFTSFPNLFMAGD 372 (496)
Q Consensus 303 ~~~~~~~~~eel~~~vl~~L~~~~-P~~~~~~v~~~--~v~~~~~-----a~~~-~~pG~~-~~rp~~~t~i~gL~lAGd 372 (496)
+..+..++++++++.++++|+++| |+. ..+... .+++|.. +.+. +.||.. .+.+....|.++|||||+
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~--~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe 125 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRI--EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGE 125 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGG--GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCc--HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEH
Confidence 445667789999999999999999 665 245455 6778853 2233 346643 223334467889999999
Q ss_pred CccCCCCCCCCCCCCccccccCcChHHHHHHHHHHcCC
Q 010972 373 WITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQW 410 (496)
Q Consensus 373 ~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg~ 410 (496)
+|...+|. ||||+.||. +||++|++.++.
T Consensus 126 ~ts~~~g~------~eGAl~SG~---raA~~i~~~l~~ 154 (181)
T 2e1m_C 126 HVSLKHAW------IEGAVETAV---RAAIAVNEAPVG 154 (181)
T ss_dssp GGTTSTTS------HHHHHHHHH---HHHHHHHTCCC-
T ss_pred HHcCCccC------HHHHHHHHH---HHHHHHHHHhcc
Confidence 99876777 999999999 999999998863
No 35
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.89 E-value=0.00027 Score=70.47 Aligned_cols=195 Identities=13% Similarity=0.049 Sum_probs=105.4
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHHhhccccccChHHHHHHhcC
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 242 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l 242 (496)
.+.+.|.+.+++.|++|+++++|++|..++ +++ +|+++++++.||.||+|++.+.. .+++.... .+
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~s~-~l~~~~~~----------~~ 230 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKTPSGDVWANHVVVASGVWSG-MFFKQLGL----------NN 230 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEETTEEEEEEEEEECCGGGTH-HHHHHTTC----------CC
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEcCCceEEcCEEEECCChhHH-HHHHhcCC----------CC
Confidence 377888888888999999999999999876 456 57776558999999999998743 23322110 11
Q ss_pred CCccEEEEEEEEccCCCCCCCCceeeccCCCCcceEEecccccccCCCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHH
Q 010972 243 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYL 322 (496)
Q Consensus 243 ~~~~~~~v~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d~s~~~~~~~~~~~~ll~~~~~~~~~~~~~~~eel~~~vl~~L 322 (496)
+..++-...+.++.+... .. ..++ . ...+ ++ +. +++.++.........+....+++..+.+++.+
T Consensus 231 ~~~~~~g~~~~~~~~~~~-~~-~~~~--~-~~~~-~~------p~---~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~ 295 (382)
T 1ryi_A 231 AFLPVKGECLSVWNDDIP-LT-KTLY--H-DHCY-IV------PR---KSGRLVVGATMKPGDWSETPDLGGLESVMKKA 295 (382)
T ss_dssp CCEEEEEEEEEEECCSSC-CC-SEEE--E-TTEE-EE------EC---TTSEEEEECCCEETCCCCSCCHHHHHHHHHHH
T ss_pred ceeccceEEEEECCCCCC-cc-ceEE--c-CCEE-EE------Ec---CCCeEEEeecccccCCCCCCCHHHHHHHHHHH
Confidence 122232333444433210 01 1121 1 1111 11 10 12333211111112233334566778899999
Q ss_pred hHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCCCCCC-CC-CCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHH
Q 010972 323 SKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG-FT-SFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILE 400 (496)
Q Consensus 323 ~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~rp~~-~t-~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~A 400 (496)
.+++|.+....+... |. +....+++.. |.. .. ..+|+|+++.+. ++|. ..|..+|. .+
T Consensus 296 ~~~~p~l~~~~~~~~----w~-g~~~~t~d~~---p~ig~~~~~~~l~~~~G~~--g~G~-------~~a~~~g~---~l 355 (382)
T 1ryi_A 296 KTMLPAIQNMKVDRF----WA-GLRPGTKDGK---PYIGRHPEDSRILFAAGHF--RNGI-------LLAPATGA---LI 355 (382)
T ss_dssp HHHCGGGGGSEEEEE----EE-EEEEECSSSC---CEEEEETTEEEEEEEECCS--SCTT-------TTHHHHHH---HH
T ss_pred HHhCCCcCCCceeeE----EE-EecccCCCCC---cEeccCCCcCCEEEEEcCC--cchH-------HHhHHHHH---HH
Confidence 999998764334322 21 1222344432 211 11 257899987653 3454 34556666 77
Q ss_pred HHHHHH
Q 010972 401 MEAFLK 406 (496)
Q Consensus 401 A~~il~ 406 (496)
|+.|+.
T Consensus 356 a~~i~~ 361 (382)
T 1ryi_A 356 SDLIMN 361 (382)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 777653
No 36
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.87 E-value=0.00066 Score=68.14 Aligned_cols=55 Identities=24% Similarity=0.267 Sum_probs=47.2
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+++++|++|..++ +++++|+++++++.||.||+|+..+.
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRGTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTCCEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCceEECCEEEECCchhH
Confidence 77788888888999999999999999876 56777888544899999999999865
No 37
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.84 E-value=0.00031 Score=71.61 Aligned_cols=55 Identities=20% Similarity=0.359 Sum_probs=48.8
Q ss_pred hHHHHHHHHHhcCCEEEcCc---eeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGR---RVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~---~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.++|.+.++++|++|++++ +|++|..++ +++++|++ +|+++.||.||+|+..+.
T Consensus 163 ~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 163 ALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCCh
Confidence 77888888999999999999 999999877 67888888 466899999999999985
No 38
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.78 E-value=0.00099 Score=66.36 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
.+.+.|.+.+++.|++|+.+++|++|+.++ +++.+|+++++++.||.||+|+..+.
T Consensus 150 ~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 150 EATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhH
Confidence 367788888888999999999999999876 56777888655899999999999875
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.71 E-value=0.0023 Score=63.44 Aligned_cols=55 Identities=16% Similarity=0.279 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
.+.++|.+.++++|++|+++++|++|+.++ +++ +|+++++++.||.||+|+.++.
T Consensus 155 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~~-~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 155 ALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GAW-EVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCCCEEEEET--TEE-EEECSSEEEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--CeE-EEEeCCCEEEcCEEEECCChhH
Confidence 377888898999999999999999999877 454 5888666899999999999875
No 40
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.66 E-value=0.0011 Score=67.60 Aligned_cols=61 Identities=26% Similarity=0.385 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEe---------------cCCCCeEEEEEeCCeEE--ecCEEEEcCChhhHHHhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIY---------------DEERCCISDVVCGKETY--SAGAVVLAVGISTLQELI 225 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~---------------~~~~g~v~~V~~~G~~~--~Ad~VV~A~p~~~~~~Ll 225 (496)
.+.+.|.+.+++.|++|+.+++|++|+. ++ +++++|.++++++ .||.||+|+.++. .+|+
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g~i~~~Ad~VV~AtG~~s-~~l~ 258 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDGTRVEVGEKLVVAAGVWS-NRLL 258 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTSCEEEEEEEEEECCGGGH-HHHH
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCCEEeecCCEEEECCCcCH-HHHH
Confidence 3778888889899999999999999997 44 5677788854478 9999999999985 3444
Q ss_pred c
Q 010972 226 K 226 (496)
Q Consensus 226 ~ 226 (496)
+
T Consensus 259 ~ 259 (448)
T 3axb_A 259 N 259 (448)
T ss_dssp G
T ss_pred H
Confidence 3
No 41
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.55 E-value=0.0036 Score=62.30 Aligned_cols=59 Identities=19% Similarity=0.396 Sum_probs=48.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhHHHhhc
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIK 226 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~~~Ll~ 226 (496)
+.+.|.+.+++.|++|+++++|++|+.++ +++ .|+++++++.||.||+|+..+. ..+++
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~~-~~l~~ 210 (389)
T 2gf3_A 152 CIRAYRELAEARGAKVLTHTRVEDFDISP--DSV-KIETANGSYTADKLIVSMGAWN-SKLLS 210 (389)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECS--SCE-EEEETTEEEEEEEEEECCGGGH-HHHGG
T ss_pred HHHHHHHHHHHCCCEEEcCcEEEEEEecC--CeE-EEEeCCCEEEeCEEEEecCccH-HHHhh
Confidence 77888888888999999999999999876 345 3777766899999999999875 33443
No 42
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.54 E-value=0.001 Score=65.65 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeC-C--eEEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~-G--~~~~Ad~VV~A~p~~~ 220 (496)
.+.+.|.+.+++.|++|+++++|++|+.+++ +.+ .|.++ | .++.||.||+|+..+.
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 151 ALMLAYQGDAESDGAQLVFHTPLIAGRVRPE-GGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-ceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 3778888999999999999999999998764 334 46664 5 4899999999999984
No 43
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.47 E-value=0.0051 Score=61.52 Aligned_cols=54 Identities=31% Similarity=0.442 Sum_probs=45.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+++++|++|+.++ +++. |.++++++.||.||+|+..+.
T Consensus 155 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v~-v~t~~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 155 TLAALFTLAQAAGATLRAGETVTELVPDA--DGVS-VTTDRGTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEE-EEESSCEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeEE-EEECCCEEEcCEEEEcCCcCh
Confidence 67788888888999999999999999876 4564 777666899999999999874
No 44
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.44 E-value=0.00096 Score=72.15 Aligned_cols=55 Identities=16% Similarity=0.261 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
.+.++|.+.+++.|++|+++++|++|+.++ +++ .|++ +|+++.||.||+|+..+.
T Consensus 418 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 418 ELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeE-EEEECCCCEEECCEEEECCCcch
Confidence 377888888888999999999999999887 555 5777 567899999999999874
No 45
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.37 E-value=0.004 Score=68.97 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
.+.+.|.+.+++.|++|+.+++|++|+.++ +++++|.++++++.||.||+|+..+.
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECCcEEECCEEEECCccch
Confidence 377889999999999999999999999876 56777888766899999999999986
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.34 E-value=0.0032 Score=68.14 Aligned_cols=55 Identities=11% Similarity=0.081 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCe-EEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~-~~~Ad~VV~A~p~~~ 220 (496)
.+.++|.+.+++.|++|+++++|++|+.++ +++ .|++ +|+ ++.||.||+|+..+.
T Consensus 413 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 413 DLTHALMMLAQQNGMTCHYQHELQRLKRID--SQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 377888888888999999999999999987 445 4777 455 899999999999874
No 47
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.15 E-value=0.00059 Score=68.06 Aligned_cols=112 Identities=11% Similarity=0.067 Sum_probs=66.4
Q ss_pred hccCCccHHHHHH-HhCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHHhccCCcceEEecCCchhhhHHHHH
Q 010972 91 RKYDSITARELFK-QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 169 (496)
Q Consensus 91 ~~~d~~Sv~~~l~-~~~~~~~~~~~l~~pl~~~~~~~~p~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~l~~aL~ 169 (496)
.++|++|+.+||+ +.++++.+++.+ ..++ .+. ....+|+...+.... .........-+.||++. |+++|+
T Consensus 257 ~~lD~~S~~~~L~~~~g~s~~~~~~~-~~~~--~~~-~~~~~s~l~~l~~~~----~~~~~~~~~~i~GG~~~-l~~~l~ 327 (376)
T 2e1m_A 257 RDFDGYSMGRFLREYAEFSDEAVEAI-GTIE--NMT-SRLHLAFFHSFLGRS----DIDPRATYWEIEGGSRM-LPETLA 327 (376)
T ss_dssp HHHTTCBHHHHHHHTSCCCHHHHHHH-HHHT--TCT-TTTTSBHHHHHHHCS----CSCTTCCEEEETTCTTH-HHHHHH
T ss_pred HHHhCCCHHHHHhhccCCCHHHHHHH-Hhhc--Ccc-ccchhhHHHHHHHhh----hhccCCceEEECCcHHH-HHHHHH
Confidence 4579999999999 788899887544 3332 122 223566555443210 11123446668899997 999998
Q ss_pred HHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcC
Q 010972 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAV 216 (496)
Q Consensus 170 ~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~ 216 (496)
+.+ +.+|++|++|++|...++ | +..+..+......-+|.+++
T Consensus 328 ~~l---~~~i~l~~~V~~I~~~~~-g-v~v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 328 KDL---RDQIVMGQRMVRLEYYDP-G-RDGHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp HHG---GGTEECSEEEEEEEECCC-C--------------CCEEEEE
T ss_pred Hhc---CCcEEecCeEEEEEECCC-c-eEEEeCCCcCCCCCeeEEEe
Confidence 776 578999999999999875 3 43222221222344566644
No 48
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.08 E-value=0.00056 Score=57.06 Aligned_cols=112 Identities=10% Similarity=-0.017 Sum_probs=52.6
Q ss_pred eEEecCEEEEcCChhhHHHhhccccccChHHHHHHhcCCCccEEEEEEEEccCCCCCCCCceeeccCCCCcceEEecccc
Q 010972 205 ETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKI 284 (496)
Q Consensus 205 ~~~~Ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d~s~~ 284 (496)
++++||+||+|+|+.+++.+...++++ ....+.++++.+....++.+.|++++|.. . . ..+ +.+.
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP-~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~-~-~-~~g----------d~s~- 68 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFS-YKKRRAVIETHYDQATKVLLEFSRRWWEF-T-E-ADW----------KREL- 68 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEESSCGGGC-C-H-HHH----------HHHH-
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCC-HHHHHHHHhCCCcceeEEEEEECCCCCCC-C-C-ccc----------cccC-
Confidence 468999999999999999886666553 33446778899999999999999999942 1 1 111 1111
Q ss_pred cccCCCCCCcEEEEE-ee-cCCCCCCCCHHHHHHHHHHHHhHhcCCCCCCeeE
Q 010972 285 YDEHKDDSATVIQAD-FY-HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 335 (496)
Q Consensus 285 ~~~~~~~~~~ll~~~-~~-~~~~~~~~~~eel~~~vl~~L~~~~P~~~~~~v~ 335 (496)
.+. ..+.++..+ .. .+..|..+++ +..+.+++.|..++|+.++.+++
T Consensus 69 ~~~---~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~~~~~~ 117 (130)
T 2e1m_B 69 DAI---APGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVDESRIG 117 (130)
T ss_dssp HHH---STTHHHHHHHHCCCSCCCC----------------------------
T ss_pred CCC---CCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCcHHHHH
Confidence 010 112222222 12 2346666666 55788999999999976533443
No 49
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.92 E-value=0.02 Score=60.30 Aligned_cols=56 Identities=30% Similarity=0.318 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeC----C--eEEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~----G--~~~~Ad~VV~A~p~~~ 220 (496)
.+...+++.+++.|++|+++++|++|..++ +++++|++. | .++.||.||.|+.++.
T Consensus 171 ~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 171 RLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 477888888889999999999999999977 678778762 3 4789999999999985
No 50
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.69 E-value=0.035 Score=55.16 Aligned_cols=60 Identities=10% Similarity=0.030 Sum_probs=48.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCeEEecCEEEEcCChhh-HHHhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
+.+.|.+.+++.|++|+.+++|++|+.++ +++.+|++ ++.+++||.||.|...+. +.+.+
T Consensus 104 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 104 FDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 66778888888899999999999999886 66776776 245899999999998875 33443
No 51
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.60 E-value=0.055 Score=49.67 Aligned_cols=88 Identities=13% Similarity=0.092 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHhHhcCCCCCCeeEeEEEEeeCCCceeeCCCCcCCCCCCCCCCCCEEEcCCCccCCCCCCCCCCCCc
Q 010972 309 LKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWRGLMSPD 388 (496)
Q Consensus 309 ~~~eel~~~vl~~L~~~~P~~~~~~v~~~~v~~~~~a~~~~~pG~~~~rp~~~t~i~gL~lAGd~t~~~~G~~~~~~~me 388 (496)
....+..+.....+......... .+....+.+|..+.+...... +...+..+|||+|||++.+ +. ++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~w~~a~~~~~~~~----~~~~~~~~~v~l~GDa~~g--~g------v~ 310 (336)
T 3kkj_A 244 ASREQVIEHLHGAFAELIDCTMP-APVFSLAHRWLYARPAGAHEW----GALSDADLGIYVCGDWCLS--GR------VE 310 (336)
T ss_dssp SCHHHHHHHHHHHHHTTCSSCCC-CCSEEEEEEEEEEEESSCCCC----SSEEETTTTEEECCGGGTT--SS------HH
T ss_pred ccchhhhhhhhhhhhhhccCCcC-cchheeccceeecccccccCc----cceeeCCCCEEEEecccCC--cC------HH
Confidence 44555566666666666543222 455566778864433221111 1122456899999998753 23 69
Q ss_pred cccccCcChHHHHHHHHHHcCCCC
Q 010972 389 SKLPTGWSTILEMEAFLKLFQWRK 412 (496)
Q Consensus 389 gAv~SG~~~~~AA~~il~~lg~~~ 412 (496)
+|+.||. .||++|++.|...+
T Consensus 311 ~A~~sG~---~aA~~I~~~L~~e~ 331 (336)
T 3kkj_A 311 GAWLSGQ---EAARRLLEHLQLEH 331 (336)
T ss_dssp HHHHHHH---HHHHHHHHHTTC--
T ss_pred HHHHHHH---HHHHHHHHHhhccC
Confidence 9999999 99999999986554
No 52
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.49 E-value=0.066 Score=56.39 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
.+...+.+.+++.|++|+.+++|++|..++ +++++|++ +|+ ++.||.||.|+.++.
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 366778888888999999999999999877 67877874 243 789999999999985
No 53
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.44 E-value=0.096 Score=51.61 Aligned_cols=60 Identities=12% Similarity=0.083 Sum_probs=46.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEcCChhh-HHHhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~--~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
+.+.|.+.+++.|++++++++|+.+..++ +++.++.. +|+ +++||.||-|...+. +.+.+
T Consensus 104 ~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~ 168 (397)
T 3oz2_A 104 FDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEEeEEEeCCccccHHHHHc
Confidence 55667777788899999999999999887 66766654 443 689999999998875 34444
No 54
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.13 E-value=0.015 Score=59.32 Aligned_cols=65 Identities=15% Similarity=0.264 Sum_probs=51.7
Q ss_pred EEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 154 ~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
.++..+....+.+.|.+.+++.|++|+++++|++|..++ +++++|++ +|+++.||.||+|+....
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 445433334488899999989999999999999999876 66677888 466699999999998765
No 55
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=95.81 E-value=0.017 Score=60.48 Aligned_cols=55 Identities=29% Similarity=0.315 Sum_probs=47.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+++++|++|..++ +++++|++ +|+++.||.||+|+....
T Consensus 222 l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 222 MIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 67778888888999999999999999877 56777888 477899999999998875
No 56
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=95.78 E-value=0.021 Score=57.29 Aligned_cols=55 Identities=24% Similarity=0.290 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++|+++++|++|..++ +++.+|++ +|+++.||.||+|++..
T Consensus 185 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 185 EISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 367778888899999999999999999876 67777887 67889999999999864
No 57
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.76 E-value=0.021 Score=57.54 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++|+++++|++|..++ +++.+|++ +|+++.||.||+|++..
T Consensus 195 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 195 ALSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCE
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 367778888899999999999999999876 66777887 67889999999999864
No 58
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=95.60 E-value=0.022 Score=56.14 Aligned_cols=54 Identities=19% Similarity=0.346 Sum_probs=45.2
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+.+++|++|+.++ +++ .|+++++++.||.||+|+.++.
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGV-TIETADGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECS--SSE-EEEESSCEEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEE-EEEECCCeEEcCEEEEcCCccH
Confidence 67788888888999999999999999876 345 4777554699999999999875
No 59
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.50 E-value=0.038 Score=55.78 Aligned_cols=63 Identities=17% Similarity=0.297 Sum_probs=50.3
Q ss_pred EEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 154 ~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
.++...... +.+.|.+.+++.|++|+++++|++|..++ +.+ .|.++++++.||.||+|+....
T Consensus 125 ~~~~~~~~~-l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~-~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 125 LFCDHSAKD-IIRMLMAEMKEAGVQLRLETSIGEVERTA--SGF-RVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp EEESSCHHH-HHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEETTEEEEESEEEECCCCSS
T ss_pred EeeCCCHHH-HHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEECCcEEEeeEEEECCCCcc
Confidence 345444444 88889999998999999999999999876 445 4777655899999999998865
No 60
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.34 E-value=0.036 Score=57.51 Aligned_cols=56 Identities=21% Similarity=0.300 Sum_probs=47.2
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CCe--EEecC-EEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAG-AVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~--~~~Ad-~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++ +|+ ++.|| .||+|+....
T Consensus 204 l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 204 LMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788999999999999999999999999743 68888877 443 58996 9999998764
No 61
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.05 E-value=0.04 Score=56.20 Aligned_cols=55 Identities=13% Similarity=0.205 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++|+++++|++|..++ +++..|.++|+++.||.||+|++..
T Consensus 192 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 192 EFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCCEE
T ss_pred hHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcCCC
Confidence 366778888899999999999999998655 5676666788889999999999764
No 62
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=94.97 E-value=0.057 Score=56.89 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=47.4
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEcCChhh
Q 010972 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 162 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G~--~~~Ad~VV~A~p~~~ 220 (496)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++ +|+ ++.||.||+|+....
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 34778888889889999999999999998654 56777765 465 689999999998754
No 63
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=94.59 E-value=0.065 Score=56.37 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=47.4
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEcCChhh
Q 010972 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 162 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G~--~~~Ad~VV~A~p~~~ 220 (496)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++ +|+ ++.||.||+|+....
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD-HSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTT-SBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC-CcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 34778888889889999999999999998763 46777765 465 689999999998765
No 64
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.52 E-value=0.081 Score=55.75 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEcCChhh
Q 010972 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 162 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G~--~~~Ad~VV~A~p~~~ 220 (496)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++ +|+ ++.||.||+|+....
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 34778899999899999999999999987653 46777765 464 689999999998643
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=94.39 E-value=0.11 Score=52.18 Aligned_cols=63 Identities=13% Similarity=0.183 Sum_probs=48.7
Q ss_pred EEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEec----CCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD----EERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 154 ~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~----~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
.++..... .+.+.|.+.+++.|++|+++++|++|..+ + +++ .|.+++++++||.||+|+....
T Consensus 102 ~~p~~~~~-~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~~-~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 102 LFCDEGAE-QIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VRF-VLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp EEETTCTH-HHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CCE-EEEETTEEEEESEEEECCCCSS
T ss_pred EccCCCHH-HHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--CeE-EEEECCCEEECCEEEECCCCcc
Confidence 34443233 37888998898899999999999999976 4 445 4777666899999999997765
No 66
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=94.25 E-value=0.087 Score=48.33 Aligned_cols=53 Identities=15% Similarity=0.073 Sum_probs=43.4
Q ss_pred hHHHHHHHHHhc-CCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++. |.+|+ +++|++|..++ +++++|.+ +|+++.||.||.|+...
T Consensus 70 ~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 70 FHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCC
Confidence 666777888886 88998 68999999876 56777777 56789999999999884
No 67
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=94.19 E-value=0.12 Score=52.67 Aligned_cols=56 Identities=23% Similarity=0.254 Sum_probs=45.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChhhH
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 221 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~~~ 221 (496)
+.+.|.+.+++.|++|+++++|++|..++ +++++|++ +|+ ++.||.||.|......
T Consensus 102 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 102 YNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 66778888888899999999999999876 56766654 565 7899999999998753
No 68
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.14 E-value=0.1 Score=52.74 Aligned_cols=54 Identities=20% Similarity=0.383 Sum_probs=44.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEe--cCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~--~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|.. ++ +++..|++ +|+++.+|.||+|++..
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 667778888899999999999999987 44 55766777 67889999999999864
No 69
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.07 E-value=0.086 Score=53.70 Aligned_cols=55 Identities=11% Similarity=0.100 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 162 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
..+.+.+.+.+++.|++|+++++|++|+.++ +++ .|.++++++.||.||+|++..
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~~~g~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLETSEQEISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEESSCEEEESEEEECSCCB
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEECCCEEEeCEEEECcCCC
Confidence 3367778888899999999999999999766 456 577765589999999999764
No 70
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=94.02 E-value=0.12 Score=52.77 Aligned_cols=54 Identities=20% Similarity=0.262 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++|+++++|++|+.++ +++. |++ +|+++.||.||+|++..
T Consensus 203 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 203 SLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEE-EEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 367778888899999999999999998865 5565 544 78889999999999874
No 71
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=93.98 E-value=0.9 Score=48.37 Aligned_cols=63 Identities=25% Similarity=0.300 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHhcCC--EEEcCceeeeEEecCC--CCeEEEEEe-------CC--eEEecCEEEEcCChhh-HHHhhc
Q 010972 163 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEE--RCCISDVVC-------GK--ETYSAGAVVLAVGIST-LQELIK 226 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~--~I~l~~~V~~I~~~~~--~g~v~~V~~-------~G--~~~~Ad~VV~A~p~~~-~~~Ll~ 226 (496)
.+.+.|.+.+++.|+ +|+++++|++|+.+++ +..|. |++ +| ++++||.||.|...+. +++.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~-v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT-VTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE-EEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEE-EEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 366778888888887 9999999999998752 11343 433 35 4789999999999875 455554
No 72
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=93.87 E-value=0.13 Score=54.29 Aligned_cols=56 Identities=13% Similarity=0.233 Sum_probs=46.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeC----------------CeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----------------KETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~----------------G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+++++|++|..+++ |+|++|+++ |.++.||.||.|.....
T Consensus 146 l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 146 LVSWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 677788888888999999999999998765 567777763 25799999999999875
No 73
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=93.79 E-value=0.045 Score=54.89 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=41.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceee---------eEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVT---------DFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~---------~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+++++|+ +|..++ +++ +|.++++++.||.||+|+..+.
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEECCcEEECCEEEECCCccH
Confidence 77888888888999999999999 888766 456 5777656899999999999875
No 74
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=93.66 E-value=0.13 Score=53.25 Aligned_cols=55 Identities=18% Similarity=0.148 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
.+...+.+.+++.|++|+++++|++|..++ + +++|++ +|+ ++.||.||.|+.++.
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARREN--G-LWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEET--T-EEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--C-EEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 477888888889999999999999999865 3 556766 464 789999999999985
No 75
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.60 E-value=0.12 Score=45.05 Aligned_cols=53 Identities=15% Similarity=0.104 Sum_probs=42.2
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.+.+.+++.|++|+++ +|++|+.++ +.+ .|+++++++.||.||+|+....
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~--~~~-~v~~~~g~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMG--GVF-EVETEEGVEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECS--SSE-EEECSSCEEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcC--CEE-EEEECCCEEEECEEEECCCCCC
Confidence 6677788888899999999 999999876 334 3666433899999999998753
No 76
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.40 E-value=0.15 Score=52.95 Aligned_cols=55 Identities=22% Similarity=0.268 Sum_probs=44.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeE--EEEEe-CCe-EEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI--SDVVC-GKE-TYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v--~~V~~-~G~-~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..+++ +++ ..|++ +|+ ++.||.||+|+...
T Consensus 257 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 257 TRAYVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 667788889999999999999999987653 443 23666 566 89999999999754
No 77
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.39 E-value=0.2 Score=47.89 Aligned_cols=54 Identities=17% Similarity=0.290 Sum_probs=42.6
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C----C--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----K--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~----G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..++ +++.+|++ + | +++.+|.||+|++..
T Consensus 186 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 186 LIKRLMDKVENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHhcccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 56677777888999999999999998765 45666665 2 4 478999999998753
No 78
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.31 E-value=0.16 Score=53.08 Aligned_cols=55 Identities=16% Similarity=0.184 Sum_probs=45.7
Q ss_pred hHHHHHHHHHhc-CCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++. |++|+++ +|++|..+++ |.+.+|++ +|+++.||.||.|+..+.
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEECCEEEECCCCch
Confidence 677788888888 9999999 9999998654 55666777 577899999999998865
No 79
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.27 E-value=0.15 Score=50.93 Aligned_cols=61 Identities=13% Similarity=0.140 Sum_probs=46.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCe--EEecCEEEEcCChhh-HHHhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE--TYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~--~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
+.+.|.+.+++.|++|+.+++|++|+.+++ +.+..|.+ +|+ ++.||.||.|+..+. +.+++
T Consensus 108 ~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~ 172 (421)
T 3nix_A 108 FDKTLADEAARQGVDVEYEVGVTDIKFFGT-DSVTTIEDINGNKREIEARFIIDASGYGRVIPRMF 172 (421)
T ss_dssp HHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhc
Confidence 667788888888999999999999998764 33333554 465 699999999998875 34444
No 80
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=93.24 E-value=0.18 Score=52.20 Aligned_cols=55 Identities=16% Similarity=0.151 Sum_probs=45.7
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G~--~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+++++|++|..++ +++.+|++ +|+ ++.||.||.|+..+.
T Consensus 113 l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 113 FDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 66778888888899999999999999876 66766665 363 799999999999864
No 81
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.19 E-value=0.12 Score=51.89 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=43.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.+.+.+++.|++|++++.|++|+.++ ++.+|++ +|+++.||.||++++...
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCee
Confidence 56667778888999999999999998654 3445777 688999999999998753
No 82
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.16 E-value=0.19 Score=51.90 Aligned_cols=55 Identities=20% Similarity=0.130 Sum_probs=45.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+.+ +|++|..+++ +.+.+|++ +|+++.||.||.|...+.
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEEcCEEEECCCcch
Confidence 6677888888889999999 9999998654 55666777 566899999999999875
No 83
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.09 E-value=0.21 Score=50.98 Aligned_cols=53 Identities=17% Similarity=0.198 Sum_probs=44.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..++ +.+ .|.++++++.+|.||+|+...
T Consensus 218 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~-~v~~~~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 218 IGEAVTAAFRAEGIEVLEHTQASQVAHMD--GEF-VLTTTHGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEEET--TEE-EEEETTEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEE-EEEECCcEEEcCEEEECCCCC
Confidence 67778888999999999999999998765 433 477777889999999999874
No 84
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.03 E-value=0.17 Score=52.15 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=43.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.++ +++. |++ +|+++.||.||+|+...
T Consensus 225 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~-v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 225 AALVLEESFAERGVRLFKNARAASVTRTG--AGVL-VTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECS--SSEE-EEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEEE-EEECCCcEEEcCEEEECCCCC
Confidence 66778888899999999999999999765 3453 555 57789999999999875
No 85
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=92.99 E-value=0.13 Score=51.08 Aligned_cols=61 Identities=18% Similarity=0.166 Sum_probs=47.6
Q ss_pred hHHHHHHHHHhc-CCEEEcCceeeeEEecCCCCeEE-EEEe-CCeEEecCEEEEcCChhh-HHHhhc
Q 010972 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCIS-DVVC-GKETYSAGAVVLAVGIST-LQELIK 226 (496)
Q Consensus 164 l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~g~v~-~V~~-~G~~~~Ad~VV~A~p~~~-~~~Ll~ 226 (496)
+.+.|.+.+++. |++|+++++|++|+.+++ +++ .|++ +|++++||.||.|...+. +.+.+.
T Consensus 109 l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~--~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 109 LRRLVLEKIDGEATVEMLFETRIEAVQRDER--HAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHTTCTTEEEECSCCEEEEEECTT--SCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC--ceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 667788888777 899999999999998773 452 3666 577899999999999875 445543
No 86
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.89 E-value=0.18 Score=51.85 Aligned_cols=53 Identities=26% Similarity=0.342 Sum_probs=44.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.++ +++ .|++ +|+++.||.||+|++..
T Consensus 234 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 234 LRQLLNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 67778888888999999999999999876 445 4666 57789999999999864
No 87
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.82 E-value=0.18 Score=52.00 Aligned_cols=54 Identities=17% Similarity=0.247 Sum_probs=43.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|++ +|+++.+|.||+|++..
T Consensus 237 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 237 IREEVTKQLTANGIEIMTNENPAKVSLNTD-GSK-HVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-ceE-EEEECCCcEEEcCEEEECCCCc
Confidence 667788888999999999999999987653 333 4666 67789999999999764
No 88
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=92.78 E-value=0.2 Score=49.62 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=43.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.++ +.+ .|++ +|+++.||.||+|++..
T Consensus 189 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 189 AAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGL-EAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHHHHHTTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEecC--CEE-EEEECCCCEEECCEEEECcCCC
Confidence 66778888889999999999999998765 444 4666 67789999999999864
No 89
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.72 E-value=0.17 Score=52.05 Aligned_cols=54 Identities=15% Similarity=0.190 Sum_probs=43.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.+++ +.+ .|++ +|+++.+|.||+|++..
T Consensus 233 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 233 LRKQLTEQLRANGINVRTHENPAKVTKNAD-GTR-HVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHHTTEEEEETCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEE-EEEECCCcEEEcCEEEEccCCC
Confidence 667788888999999999999999987653 334 4666 57789999999999764
No 90
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.72 E-value=0.21 Score=51.28 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=42.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC-eEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G-~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.|++|+++++|++|+.+++ +++..|++ +| +++.+|.||+|++.
T Consensus 228 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 228 IQNTITDHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEECCCcEEEEcCEEEECCCC
Confidence 667788888889999999999999987653 32234666 57 78999999999975
No 91
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=92.70 E-value=0.19 Score=51.88 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=44.5
Q ss_pred HHHHHHHHhcC-CEEEcCceeeeEEecCCCCeEEEEEe---CC-----eEEecCEEEEcCChhhHHHhh
Q 010972 166 EPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 225 (496)
Q Consensus 166 ~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~g~v~~V~~---~G-----~~~~Ad~VV~A~p~~~~~~Ll 225 (496)
.++.+.++++| .+|++++.|++|..+++++++++|++ +| .++.|+.||+|+......+||
T Consensus 225 ~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL 293 (504)
T 1n4w_A 225 KTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELL 293 (504)
T ss_dssp TTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHH
Confidence 34444455565 89999999999999754247888876 45 368899999999987655543
No 92
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=92.55 E-value=0.25 Score=46.71 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=42.6
Q ss_pred hHHHHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe----------CC-----eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----------GK-----ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~----------~G-----~~~~Ad~VV~A~p~~ 219 (496)
+...|.+.+.+ .|++|+++++|++|..++ +++.+|++ +| .++.||.||+|+...
T Consensus 121 ~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 121 FTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 56677777765 699999999999999876 66767765 22 578999999999864
No 93
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=92.47 E-value=0.22 Score=52.83 Aligned_cols=56 Identities=11% Similarity=0.132 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
.+...|.+.+.+.|++|+.+++|++|..++ |++.+|.+ +|+ .+.|+.||+|+....
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 477888888888899999999999999876 77888765 354 689999999998765
No 94
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=92.46 E-value=0.23 Score=52.43 Aligned_cols=58 Identities=14% Similarity=0.194 Sum_probs=47.0
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 162 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
..+.+.|.+.+++.|++|+++++|++|..+++ |++++|.+ +|+ ++.||.||+|+....
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 34778898888888999999999999998633 67877764 354 689999999998854
No 95
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=92.44 E-value=0.27 Score=52.57 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
.+...|.+.+.+.|++|+.+++|++|..++ |++.+|.+ +|+ .+.||.||+|+....
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 477888888888899999999999999866 67878765 354 489999999998764
No 96
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.31 E-value=0.22 Score=50.80 Aligned_cols=53 Identities=19% Similarity=0.146 Sum_probs=43.6
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEE-e-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV-C-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~-~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.+++ +.+ .|+ + +|+ +.||.||+|++..
T Consensus 213 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 213 MRRGLHAAMEEKGIRILCEDIIQSVSADAD-GRR-VATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTT-SCE-EEEESSSCE-EEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCC-CEE-EEEEcCCCe-EEeCEEEEeeCcc
Confidence 677788889999999999999999998754 434 477 6 466 9999999999864
No 97
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=92.31 E-value=0.17 Score=52.04 Aligned_cols=53 Identities=21% Similarity=0.372 Sum_probs=43.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|.. + +++..|.++|+++.+|.||+|++..
T Consensus 238 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~--~~v~~v~~~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 238 LTDLMAKNMEEHGIQLAFGETVKEVAG-N--GKVEKIITDKNEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHHHHHTTTCEEEETCCEEEEEC-S--SSCCEEEESSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEc-C--CcEEEEEECCcEEECCEEEECCCCC
Confidence 667778888899999999999999985 3 3454566788889999999999763
No 98
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=92.26 E-value=0.24 Score=47.85 Aligned_cols=55 Identities=16% Similarity=0.025 Sum_probs=43.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.+.+.+++.|.+++++++|++|..++ +.+.+|.++++++.+|.||+|+....
T Consensus 78 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 78 VLAYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDGRQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTSCEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCCCEEEeCEEEECCCCCC
Confidence 55667777778899999999999999877 44433677655899999999999644
No 99
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.19 E-value=0.26 Score=50.74 Aligned_cols=53 Identities=15% Similarity=0.163 Sum_probs=43.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.++++|++|++++.|++|..++ +++ .|++ +|+++.||.||++++..
T Consensus 228 ~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECCCCEEECCEEEECCCCC
Confidence 56677788889999999999999998765 445 4666 67889999999998764
No 100
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=91.94 E-value=0.27 Score=49.92 Aligned_cols=54 Identities=11% Similarity=0.209 Sum_probs=43.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.+++ +.+ .|++ +|+++.+|.||+|+...
T Consensus 210 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 210 ISETLVEVMNAEGPQLHTNAIPKAVVKNTD-GSL-TLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHHHHHSCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-cEE-EEEECCCcEEEcCEEEECCCCC
Confidence 667788888889999999999999987653 334 4666 67789999999998653
No 101
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=91.83 E-value=0.31 Score=49.54 Aligned_cols=53 Identities=25% Similarity=0.276 Sum_probs=43.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..++ +.+. |++ +|+++.+|.||+|+...
T Consensus 210 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~-v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 210 VSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGAR-VELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEE-EEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEE-EEECCCeEEEcCEEEECcCCC
Confidence 67778888888999999999999999766 4453 565 57789999999999864
No 102
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=91.72 E-value=0.43 Score=48.84 Aligned_cols=54 Identities=24% Similarity=0.294 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++|+++++|++|..+ +++..|.++++++.+|.||+|++..
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 228 DMAEYIYKEADKHHIEILTNENVKAFKGN---ERVEAVETDKGTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES---SBEEEEEETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEECCCEEEcCEEEECcCCC
Confidence 36677888888999999999999999864 3466677777789999999999764
No 103
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=91.68 E-value=0.35 Score=50.31 Aligned_cols=55 Identities=16% Similarity=0.165 Sum_probs=45.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++++.+ +|++|..+++ |.+++|++ +|+++.||.||.|+..+.
T Consensus 167 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 167 VADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEECCCcEEEeCEEEECCCCch
Confidence 6777888888889999999 8999998654 55556777 466899999999998865
No 104
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.64 E-value=0.39 Score=46.67 Aligned_cols=45 Identities=20% Similarity=0.309 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhH
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 221 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~ 221 (496)
.+.++|.+.+++.|++|+. ++|++|+..+ .+.||.||+|+..+.-
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA-------------REGADVIVNCTGVWAG 187 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------HTTCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------cCCCCEEEECCCcChH
Confidence 3778888889899999998 8998885432 1569999999998763
No 105
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=91.63 E-value=0.29 Score=51.71 Aligned_cols=54 Identities=19% Similarity=0.109 Sum_probs=45.0
Q ss_pred hHHHHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++ .|++| +++.|+.|..++ +++++|.+ +|.++.||.||+|+....
T Consensus 125 ~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 125 YREYMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 67778888877 48899 688999999877 67888888 577899999999999764
No 106
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=91.25 E-value=0.32 Score=51.64 Aligned_cols=54 Identities=20% Similarity=0.158 Sum_probs=44.7
Q ss_pred hHHHHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.+.+.+++ .|++| +++.|+.|..++ ++|++|.+ +|.++.||.||+|+....
T Consensus 126 ~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 126 YRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 66777888877 58899 688999999876 67888888 577899999999999864
No 107
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.23 E-value=0.36 Score=46.30 Aligned_cols=51 Identities=10% Similarity=0.048 Sum_probs=39.1
Q ss_pred HHHHHHHHhc-CCEEEcCceeeeEEecCCCCeEEEEEe-C-----CeEEecCEEEEcCCh
Q 010972 166 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-G-----KETYSAGAVVLAVGI 218 (496)
Q Consensus 166 ~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~g~v~~V~~-~-----G~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+. |++|+++++|++|..++ +++.+|++ + ++++.+|.||++++.
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEccc--CcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 4456666665 99999999999999876 45666665 2 357899999999876
No 108
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=90.89 E-value=0.52 Score=48.89 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=44.2
Q ss_pred hHHHHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++ .|++|+.+ .|++|+.+++ |.+..|++ +|+++.||.||.|...+.
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEECCCCEEEcCEEEECCCcch
Confidence 66778888888 89999999 5999988654 45556776 566799999999998864
No 109
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=90.78 E-value=0.45 Score=50.21 Aligned_cols=55 Identities=22% Similarity=0.160 Sum_probs=44.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CC--eEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G--~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++.|++|+.+++|++|..++ +.+++|++ +| .++.||.||.|.....
T Consensus 130 l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 130 FDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 66778888888999999999999999864 33445666 56 5799999999998865
No 110
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=90.73 E-value=0.43 Score=49.30 Aligned_cols=60 Identities=15% Similarity=0.141 Sum_probs=43.8
Q ss_pred HHHHHHHHhcC-CEEEcCceeeeEEecCCCCeEEEEEe---CC-----eEEecCEEEEcCChhhHHHhh
Q 010972 166 EPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 225 (496)
Q Consensus 166 ~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~g~v~~V~~---~G-----~~~~Ad~VV~A~p~~~~~~Ll 225 (496)
.++...+++.| .+|++++.|++|..+++++++++|+. +| .++.|+.||+|+......+||
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 34444444555 89999999999998764236888876 45 267899999999987655544
No 111
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.73 E-value=0.42 Score=46.62 Aligned_cols=54 Identities=9% Similarity=0.027 Sum_probs=42.6
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..++ +++.+|++ +| +++.+|.||++++..
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEESN--GVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEET--TEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccCC--CceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 45566677778899999999999999875 55656665 56 578999999998753
No 112
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=90.58 E-value=0.33 Score=49.19 Aligned_cols=53 Identities=26% Similarity=0.405 Sum_probs=43.2
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+|+++++|++|..++ ++..|.++|+++.+|.||+|++..
T Consensus 193 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~v~~v~~~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 193 FTDVLTEEMEANNITIATGETVERYEGDG---RVQKVVTDKNAYDADLVVVAVGVR 245 (447)
T ss_dssp HHHHHHHHHHTTTEEEEESCCEEEEECSS---BCCEEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEccC---cEEEEEECCCEEECCEEEECcCCC
Confidence 66778888888999999999999998642 344466777889999999999764
No 113
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.56 E-value=0.44 Score=46.44 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=41.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.+.+.+++.|.+|+++++|++|..++ +.+. |.++++++.+|+||+|+....
T Consensus 90 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~g~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 90 YAEYLQVVANHYELNIFENTVVTNISADD--AYYT-IATTTETYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEE-EEESSCCEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeEE-EEeCCCEEEeCEEEECCCCCC
Confidence 44556666677899999999999999876 3343 666544799999999998753
No 114
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=90.55 E-value=0.45 Score=50.35 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHhcC-CEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 162 EKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 162 ~~l~~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
..+...|.+.+++.| ++|+++++|++|..++ +++.+|.. +|+ ++.||.||+|+....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 347788888888888 9999999999999876 67777753 465 689999999998864
No 115
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.54 E-value=0.54 Score=44.90 Aligned_cols=51 Identities=18% Similarity=0.352 Sum_probs=39.0
Q ss_pred HHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCCh
Q 010972 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 166 ~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~ 218 (496)
..+.+.+++.|++|+++++|++|..++ +++.+|++ +|+ ++.+|.||+|++.
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 345666778899999999999998765 44555554 454 6899999999865
No 116
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=90.40 E-value=0.55 Score=46.21 Aligned_cols=57 Identities=14% Similarity=0.157 Sum_probs=45.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh-HHHhhc
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELIK 226 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~-~~~Ll~ 226 (496)
+.+.|.+.+++.|++|+++++|++|+. + + .|++ +|+++.||.||.|+.... +.+.+.
T Consensus 109 l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 109 LHDALVNRARALGVDISVNSEAVAADP-V--G---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEET-T--T---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 667788888888999999999999987 4 5 2455 577899999999999875 444443
No 117
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.24 E-value=0.57 Score=48.25 Aligned_cols=55 Identities=11% Similarity=0.114 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeE-EecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKET-YSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~-~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++|++++.|++|..+++ +.+ .|++ +|++ +.+|.||+|++..
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSD-KNL-SIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESST-TCE-EEEETTSCEEEEESEEEECCCBC
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCC-ceE-EEEECCCcEEEECCEEEECCCCC
Confidence 3667788889999999999999999987653 334 3566 5777 9999999999764
No 118
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=90.19 E-value=0.61 Score=48.39 Aligned_cols=61 Identities=21% Similarity=0.244 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCC---eEEEEEe-CC---eEEecCEEEEcCChhh-HHHhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC---CISDVVC-GK---ETYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g---~v~~V~~-~G---~~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
.+.+.|.+.+++.|++|+++++|++|+.+++ + .|+ |++ ++ .+++||.||.|...+. +.+.+
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 3667788888888999999999999998773 1 554 444 44 6899999999999875 44544
No 119
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=90.17 E-value=0.64 Score=47.43 Aligned_cols=53 Identities=19% Similarity=0.223 Sum_probs=42.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC---eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G---~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.++ +.+. |++ ++ +++.+|.||+|++..
T Consensus 223 ~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~-v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 223 VAKEAQKILTKQGLKILLGARVTGTEVKN--KQVT-VKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHTTEEEEETCEEEEEEECS--SCEE-EEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEcC--CEEE-EEEEeCCCcEEEECCEEEEeeCCc
Confidence 67778888889999999999999999876 3454 444 33 578999999999864
No 120
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=90.06 E-value=0.55 Score=49.02 Aligned_cols=54 Identities=15% Similarity=0.309 Sum_probs=42.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEec------------------CCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD------------------EERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~------------------~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|++++.|++|..+ ++ +++. ++. +|+++.||.||+|++..
T Consensus 194 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 194 MAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK-GHLS-LTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT-CEEE-EEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC-CcEE-EEEcCCCEEEcCEEEECcCCc
Confidence 6667778888999999999999999873 22 4554 444 67889999999999764
No 121
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=90.02 E-value=0.46 Score=48.59 Aligned_cols=55 Identities=20% Similarity=0.268 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CCeEEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~~~~Ad~VV~A~p~~~ 220 (496)
.+.+.|.+.+++.|++|+.+++| +|..++ +++.+|.+ +++++.||.||+|+....
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 37778888887789999999999 998876 67877765 344688999999998764
No 122
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=89.97 E-value=0.64 Score=47.35 Aligned_cols=53 Identities=19% Similarity=0.149 Sum_probs=43.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCe-EEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~-~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++ +|+ ++.+|.||+|++..
T Consensus 209 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 209 LSATLAENMHAQGIETHLEFAVAALERDA--QGT-TLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEEET--TEE-EEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeE-EEEEeCCcEEEEcCEEEECCCCC
Confidence 66777888889999999999999998765 334 4666 677 79999999998753
No 123
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=89.90 E-value=0.59 Score=46.70 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=40.6
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+ + +. |++ +|+++.+|.||++++..
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~~---v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV--D--GV---VLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE--T--TE---EEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE--C--CE---EEECCCCEEEcCEEEECcCCC
Confidence 66777888889999999999999998 4 42 445 67889999999999864
No 124
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=89.51 E-value=0.84 Score=46.43 Aligned_cols=53 Identities=13% Similarity=0.124 Sum_probs=42.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--C--Ce--EEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~--G~--~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+|+++++|++|..++ +.+. |++ + |+ ++.+|.||+|+...
T Consensus 212 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 212 TAALLRRALEKEGIRVRTKTKAVGYEKKK--DGLH-VRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEE-EEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEEE-EEEeecCCCceeEEEcCEEEECCCcc
Confidence 66777888889999999999999998765 4443 554 5 66 79999999998753
No 125
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=89.36 E-value=0.87 Score=46.32 Aligned_cols=53 Identities=15% Similarity=0.279 Sum_probs=41.1
Q ss_pred hHHHHHHHH-HhcCCEEEcCceeeeEEecCCCCeEEEEEe---CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSM-RTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l-~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+ ++.|++|+++++|++|+.++ +++. |++ +| +++.+|.||+|++..
T Consensus 217 ~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 217 VTNALVGALAKNEKMKFMTSTKVVGGTNNG--DSVS-LEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHHHHTCCEEECSCEEEEEEECS--SSEE-EEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEEEEEcC--CeEE-EEEEcCCCceEEEECCEEEECCCcc
Confidence 667788888 89999999999999998765 3343 443 45 579999999999764
No 126
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=89.28 E-value=0.82 Score=45.10 Aligned_cols=60 Identities=10% Similarity=-0.007 Sum_probs=45.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEcCChhh-HHHhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~--~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
+.+.|.+.+.+.|++|+++++|++|+.+++ +.+. |++ +|+ ++.||.||.|...+. +.+.+
T Consensus 105 l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~-v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l 169 (394)
T 1k0i_A 105 VTRDLMEAREACGATTVYQAAEVRLHDLQG-ERPY-VTFERDGERLRLDCDYIAGCDGFHGISRQSI 169 (394)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSCE-EEEEETTEEEEEECSEEEECCCTTCSTGGGS
T ss_pred HHHHHHHHHHhcCCeEEeceeEEEEEEecC-CceE-EEEecCCcEEEEEeCEEEECCCCCcHHHHhc
Confidence 666777777778999999999999987642 2343 444 676 799999999999875 34444
No 127
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=89.26 E-value=0.64 Score=43.99 Aligned_cols=47 Identities=13% Similarity=0.211 Sum_probs=37.1
Q ss_pred HHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEcCCh
Q 010972 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 170 ~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G~--~~~Ad~VV~A~p~ 218 (496)
+.+++.|++|+++++|++|..++ +++.+|++ +|+ ++.+|.||++++.
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 33467899999999999998766 56666665 464 7899999999875
No 128
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=88.85 E-value=0.62 Score=48.98 Aligned_cols=52 Identities=13% Similarity=0.199 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++|+++++|++|+.++ +. |++ +|+++.+|.||+|++..
T Consensus 229 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~---v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 229 EMAAYVHEHMKNHDVELVFEDGVDALEENG--AV---VRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEGGG--TE---EEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHcCCEEEECCeEEEEecCC--CE---EEECCCCEEEcCEEEEccCCC
Confidence 367778888899999999999999998655 33 344 67889999999999864
No 129
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=88.76 E-value=1 Score=45.71 Aligned_cols=53 Identities=15% Similarity=0.256 Sum_probs=42.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.++ +++. |.+ +| +++.+|.||+|+...
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 214 VSKEIEKQFKKLGVTILTATKVESIADGG--SQVT-VTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHHHHHTCEEECSCEEEEEEECS--SCEE-EEEESSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEcC--CeEE-EEEEcCCceEEEEcCEEEECCCCC
Confidence 56677788888999999999999998765 3353 444 46 579999999998763
No 130
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=88.72 E-value=0.46 Score=49.53 Aligned_cols=56 Identities=20% Similarity=0.222 Sum_probs=43.0
Q ss_pred hHHHHHHHHHh-cCCEEEcCceeeeEEecCCCC------eEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERC------CISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g------~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.+++ .|++|+++++|++|..+++ + ++.+|.+ +|+ ++.||.||+|+....
T Consensus 140 l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 140 VETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp --CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 66677777777 6999999999999998332 4 7777765 355 689999999998764
No 131
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=88.63 E-value=0.83 Score=46.53 Aligned_cols=55 Identities=16% Similarity=0.256 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe------CCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC------GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~------~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++|+++++|++|..+++ +.+. |+. +++++.+|.||+|++..
T Consensus 221 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~-v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 221 EISKNFQRILQKQGFKFKLNTKVTGATKKSD-GKID-VSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT-SCEE-EEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCceEEEEEEcCC-ceEE-EEEEecCCCCceEEEcCEEEECcCCC
Confidence 3667788888899999999999999987653 3243 442 45689999999999764
No 132
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=88.50 E-value=1.2 Score=42.61 Aligned_cols=53 Identities=17% Similarity=0.118 Sum_probs=40.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G--~~~~Ad~VV~A~p~~ 219 (496)
..+.+.+.+++.|.+|++++.|++|..++ ++.+|++ +| +++.+|.||++++..
T Consensus 193 ~~~~l~~~l~~~gv~v~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 193 SVKELMKAHEEGRLEVLTPYELRRVEGDE---RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHTTSSEEETTEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhccccCCeEEecCCcceeEccCC---CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 45667777777899999999999998743 3444554 46 578999999998754
No 133
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=88.44 E-value=1 Score=46.26 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=46.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCe---EEecCEEEEcCChhh-HHHhhc
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE---TYSAGAVVLAVGIST-LQELIK 226 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~---~~~Ad~VV~A~p~~~-~~~Ll~ 226 (496)
+.+.|.+.+++.|++|+++++|++|+.+++ .|+ |++ +|+ +++||.||.|...+. +.+.+.
T Consensus 109 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 109 TESVLEEWALGRGAELLRGHTVRALTDEGD--HVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEEECSS--CEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--EEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 667778888888999999999999998774 465 555 443 789999999999875 455553
No 134
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=88.40 E-value=0.95 Score=46.35 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=42.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeC----C--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~----G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.++ +.+. |++. | +++.+|.||+|++..
T Consensus 241 ~~~~l~~~l~~~gV~v~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 241 VAKQLQRMLTKQGIDFKLGAKVTGAVKSG--DGAK-VTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEE-EEEEETTSCCCEEEEESEEEECCCCE
T ss_pred HHHHHHHHHHhCCCEEEECCeEEEEEEeC--CEEE-EEEEecCCCceEEEEcCEEEEeeCCc
Confidence 67778888889999999999999999876 3443 4432 5 579999999999763
No 135
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=88.25 E-value=0.41 Score=49.36 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=43.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEcCChhhH
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGISTL 221 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G--~~~~Ad~VV~A~p~~~~ 221 (496)
+.+.|.+.+++.|++|+++++|++|+.+++++..+.|++ +| .++.||.||.|+.....
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 667788888888999999999999987421022234655 45 47899999999988653
No 136
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=87.99 E-value=1.1 Score=46.10 Aligned_cols=60 Identities=18% Similarity=0.149 Sum_probs=46.7
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCe---EEecCEEEEcCChhh-HHHhhc
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE---TYSAGAVVLAVGIST-LQELIK 226 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~---~~~Ad~VV~A~p~~~-~~~Ll~ 226 (496)
+.+.|.+.+++.|++|+++++|++|+.++ +.|+ |++ ++. +++||.||.|...+. +.+.+.
T Consensus 108 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 108 TETHLEQWATGLGADIRRGHEVLSLTDDG--AGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 66677888888899999999999999877 4465 555 332 789999999999875 455553
No 137
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=87.89 E-value=1.1 Score=43.65 Aligned_cols=54 Identities=15% Similarity=0.244 Sum_probs=43.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+++++++|++|..+++ +.+ .|.+ +|+++.+|.||+|+...
T Consensus 76 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 76 LVESLWAQAERYNPDVVLNETVTKYTKLDD-GTF-ETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHTTCCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ceE-EEEECCCcEEEeeEEEEccCCC
Confidence 566777777788999999999999998763 344 3666 56689999999999874
No 138
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.89 E-value=0.96 Score=45.79 Aligned_cols=53 Identities=17% Similarity=0.192 Sum_probs=41.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--C--CeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~--G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..++ +.+. |++ + ++++.+|.||+|++..
T Consensus 213 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 213 MAAIIKKRLKKKGVEVVTNALAKGAEERE--DGVT-VTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeEE-EEEEeCCceeEEEcCEEEECcCCC
Confidence 66777888889999999999999998765 4443 443 2 4579999999998764
No 139
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=87.88 E-value=0.83 Score=43.56 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=42.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.|.+++++++|++|..+++ +.+ .|.+++.++.+|.||+|+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 69 LINNLKEQMAKFDQTICLEQAVESVEKQAD-GVF-KLVTNEETHYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHTTSCCEEECSCCEEEEEECTT-SCE-EEEESSEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHhCCcEEccCEEEEEEECCC-CcE-EEEECCCEEEeCEEEECCCC
Confidence 666677777778999999999999998763 244 47776555999999999987
No 140
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=87.79 E-value=1.5 Score=44.68 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=42.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCC-eEEEEEeC----C----eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-CISDVVCG----K----ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g-~v~~V~~~----G----~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|++++.|++|+.+++ + ++ .|.+. | +++.+|.||+|++..
T Consensus 230 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~-~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 230 ISTNCTEELENAGVEVLKFSQVKEVKKTLS-GLEV-SMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEEEECSS-SEEE-EEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEE-EEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 667778888899999999999999997654 4 34 35553 2 578999999999763
No 141
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=87.79 E-value=0.49 Score=49.68 Aligned_cols=59 Identities=22% Similarity=0.180 Sum_probs=46.7
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CC-eEEecCEEEEcCChhh-HHHhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ETYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G-~~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
+.+.|.+.+++.|++|+++++|++|+.+++ .|+ |++ +| ++++||.||.|...+. +.+.+
T Consensus 150 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~--~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 150 TEALLAEHAREAGAEIPRGHEVTRLRQDAE--AVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHTEECCBSCEEEECCBCSS--CEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--eEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 667788888888999999999999998774 454 555 46 5899999999999875 44554
No 142
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=87.67 E-value=0.69 Score=47.34 Aligned_cols=53 Identities=21% Similarity=0.228 Sum_probs=42.2
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C----CeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----KETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~----G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|++++.|++|+.++ +.+ .|++ + |+++.+|.||+|++..
T Consensus 228 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~-~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 228 LVKVWQKQNEYRFDNIMVNTKTVAVEPKE--DGV-YVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHHHHHGGGEEEEECSCEEEEEEEET--TEE-EEEEESSSCCSSCEEESCEEECCCEE
T ss_pred HHHHHHHHHHhcCCEEEECCEEEEEEEcC--CeE-EEEEeccCCCceEEEcCEEEECcCCC
Confidence 66777788888999999999999998765 334 3554 4 6678999999999764
No 143
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=87.33 E-value=1.2 Score=45.48 Aligned_cols=53 Identities=19% Similarity=0.312 Sum_probs=41.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEe--cCCCCeEEEEEe------CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVC------GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~--~~~~g~v~~V~~------~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|.. ++ +.+ .|++ +++++.+|.||+|+...
T Consensus 226 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 226 VAKATQKFLKKQGLDFKLSTKVISAKRNDDK--NVV-EIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTT--TEE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEecCC--CeE-EEEEEEcCCCCceEEECCEEEECCCCC
Confidence 667788888899999999999999987 33 333 3544 24579999999999764
No 144
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=87.32 E-value=0.99 Score=46.12 Aligned_cols=54 Identities=20% Similarity=0.161 Sum_probs=41.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC-----eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-----ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G-----~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|+.+++ +.+. |++ ++ .++.+|.||+|++..
T Consensus 229 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~-v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 229 MAELVAASMEERGIPFLRKTVPLSVEKQDD-GKLL-VKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHTTCCEEETEEEEEEEECTT-SCEE-EEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CcEE-EEEecCCCCceeEEEcCEEEECcccc
Confidence 667778888899999999999999998654 4443 544 32 278999999998763
No 145
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=87.30 E-value=1.1 Score=43.00 Aligned_cols=53 Identities=17% Similarity=0.276 Sum_probs=41.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.++++++.|++|..++ +.+ .|.+ +|+++.+|.||+|+...
T Consensus 67 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 67 LVKGLVEQVAPFNPVYSLGERAETLEREG--DLF-KVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHGGGCCEEEESCCEEEEEEET--TEE-EEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEECC--CEE-EEEECCCCEEEeCEEEECCCCC
Confidence 55666677777799999999999999876 444 3666 46689999999999874
No 146
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=87.26 E-value=0.81 Score=48.46 Aligned_cols=54 Identities=17% Similarity=0.083 Sum_probs=43.5
Q ss_pred hHHHHHHHHHhc-CCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.+.+.+++. |++|+ +..|+.|..++ ++|.+|.+ +|+++.||.||+|+..+.
T Consensus 119 l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 119 YSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 566777778774 88985 66999998876 67888887 577899999999998763
No 147
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=87.24 E-value=1.1 Score=44.29 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=42.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh-HHHhhc
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELIK 226 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~-~~~Ll~ 226 (496)
+.+.|.+.+ .|++|+++++|++|+.++ +++. |++ +|+++.||.||.|...+. +++.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDS--ETVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECS--SCEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecC--CEEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 444444433 488999999999999877 4464 666 577899999999999875 344444
No 148
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=87.09 E-value=0.91 Score=43.48 Aligned_cols=52 Identities=17% Similarity=0.251 Sum_probs=41.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.++++++ |+.|..++ +.+. |.++|+++.+|.||+|+...
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~~-v~~~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSS--KPFK-LFTDSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSS--SSEE-EECSSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEEE-EEECCcEEEcCEEEECCCCC
Confidence 56667777788899999997 99998766 4443 66678889999999999875
No 149
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=87.07 E-value=0.37 Score=48.55 Aligned_cols=50 Identities=8% Similarity=-0.053 Sum_probs=37.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CCeEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.|++|++|++|++|+. +.+. +.. +|+++.+|.||++++.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~----~~v~-~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP----DKVI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS----SEEE-EECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeC----CeEE-EEecCCCceEEeeeEEEECCCC
Confidence 566788889999999999999999853 2232 222 1678999999998654
No 150
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=86.96 E-value=0.96 Score=47.07 Aligned_cols=55 Identities=31% Similarity=0.324 Sum_probs=42.7
Q ss_pred hHHHHHHHHHhcCC--EEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~--~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|. +|+++++|+++..+++++++ .|++ +|+++.||.||+|+...
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~-~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLW-EVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEE-EEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEE-EEEEcCCCEEEeCEEEECCccc
Confidence 55566666777787 89999999999987642344 4777 57789999999999863
No 151
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=86.91 E-value=1.2 Score=47.57 Aligned_cols=55 Identities=18% Similarity=0.248 Sum_probs=44.4
Q ss_pred hHHHHHHHHHhc-CC-EEEcCceeeeEEecCCCC---eEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTR-GC-EFLDGRRVTDFIYDEERC---CISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~-G~-~I~l~~~V~~I~~~~~~g---~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
+...|.+.+++. |+ +|+.+++|++|..++ + +|++|.. +|+ ++.|+.||+|+....
T Consensus 153 ~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 153 YKPIIAEAAKMAVGEENIYERVFIFELLKDN--NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHHHHHHHCGGGEECSEEEEEEEECT--TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHhcCCCcEEEecCEEEEEEEcC--CccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 566777777777 99 999999999999876 4 7888764 354 689999999998754
No 152
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=86.85 E-value=1.1 Score=46.88 Aligned_cols=55 Identities=24% Similarity=0.129 Sum_probs=42.6
Q ss_pred hHHHHHHHHHhcCC--EEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~--~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|. +|+++++|+++..+++++++ .|++ +|+++.||.||+|+...
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w-~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRW-TVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEE-EEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEE-EEEECCCCEEEeCEEEECcCCC
Confidence 55666666777776 89999999999987642344 4777 57789999999999953
No 153
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=86.70 E-value=0.82 Score=45.42 Aligned_cols=57 Identities=19% Similarity=0.165 Sum_probs=43.7
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh-HHHhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
+.+.|.+.+++ ++|+++++|++|+.++ +.+. |++ +|+++.||.||.|...+. +.+.+
T Consensus 129 l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 129 LQREMLDYWGR--DSVQFGKRVTRCEEDA--DGVT-VWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHCG--GGEEESCCEEEEEEET--TEEE-EEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHhCCc--CEEEECCEEEEEEecC--CcEE-EEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 55566666654 8999999999999887 4565 666 678899999999998874 44444
No 154
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=86.47 E-value=0.76 Score=45.74 Aligned_cols=51 Identities=12% Similarity=0.044 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|++++++++|++|+. +.+ +..+|+++.+|.||++++..
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~----~~v--~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIRE----HEI--VDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECS----SEE--EETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECC----CeE--EECCCCEEeeeEEEECCCCC
Confidence 3677788888999999999999999853 223 23368899999999998753
No 155
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.95 E-value=1.3 Score=44.93 Aligned_cols=53 Identities=17% Similarity=0.244 Sum_probs=41.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..++ +.+. |.+ +| +++.+|.||+|++..
T Consensus 220 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 220 IRKQFQRSLEKQGMKFKLKTKVVGVDTSG--DGVK-LTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHHHHHSSCCEECSEEEEEEECSS--SSEE-EEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEEcC--CeEE-EEEEecCCCcceEEECCEEEECCCCC
Confidence 66778888889999999999999998765 3343 443 34 679999999998764
No 156
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=85.55 E-value=1.4 Score=41.66 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=41.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCC-CCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~-~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+++++++|+.|..+++ ++.+ .|.+ +|+++.+|.||+|+...
T Consensus 58 ~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~-~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 58 LAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLH-QIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCeEEccCEEEEEEecccCCceE-EEEECCCCEEEeCEEEECcCCC
Confidence 556677777788999999999999976531 1233 4666 56689999999999874
No 157
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=85.27 E-value=0.56 Score=50.47 Aligned_cols=54 Identities=11% Similarity=0.053 Sum_probs=39.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|+++++|++|..++ ..+..+.+ +++++.||.||+|+...
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEEECCCCC
Confidence 35667788889999999999999997433 22221112 34579999999998764
No 158
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=85.19 E-value=1.5 Score=41.32 Aligned_cols=50 Identities=10% Similarity=0.257 Sum_probs=37.5
Q ss_pred HHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCCh
Q 010972 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 167 aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~ 218 (496)
.+.+.+++ .|.+|+++++|++|..++ +++.+|++ +|+ ++.+|.||++++.
T Consensus 184 ~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 184 VLQDKLRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHTCTTEEEESSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhhCCCeEEecCCceEEEEcCC--CcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 45566666 599999999999998765 55655655 243 6899999998764
No 159
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=84.99 E-value=1.4 Score=44.79 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=39.9
Q ss_pred hHHHHHHHHHhcCCE--EEcCceeeeEEecCCCCeEEEEEe-C---C--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCE--FLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~--I~l~~~V~~I~~~~~~g~v~~V~~-~---G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+ |++++.|++|...++++++ .|++ + | .++.+|+||+|+...
T Consensus 103 l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 103 LWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp HHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE-EEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 455566666667887 9999999999987632244 3555 2 4 578999999999954
No 160
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=84.96 E-value=1.2 Score=44.08 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=36.2
Q ss_pred HHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 169 ~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
.+.+++.|.+++++++|++|..++ +. |++ +|+++.+|++|+|+..
T Consensus 69 ~~~~~~~~i~~~~~~~V~~id~~~--~~---v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 69 NDWYEKNNIKVITSEFATSIDPNN--KL---VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HHHHHHTTCEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCE
T ss_pred HHHHHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEecCC
Confidence 344567899999999999998765 43 345 6788999999999986
No 161
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=84.84 E-value=2 Score=43.93 Aligned_cols=52 Identities=21% Similarity=0.110 Sum_probs=41.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++. .+|+++++|++|+.++ +++. |++ +| +++.+|.||+|++..
T Consensus 217 ~~~~l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 217 MKRYAEKTFNEE-FYFDAKARVISTIEKE--DAVE-VIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp HHHHHHHHHHTT-SEEETTCEEEEEEECS--SSEE-EEEECTTCCEEEEEESEEEECSCCE
T ss_pred HHHHHHHHHhhC-cEEEECCEEEEEEEcC--CEEE-EEEEeCCCceEEEECCEEEEeeCCc
Confidence 666777778777 9999999999999876 4454 544 56 679999999999764
No 162
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=84.49 E-value=3.1 Score=40.30 Aligned_cols=43 Identities=26% Similarity=0.284 Sum_probs=35.2
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~ 220 (496)
.+.++|.+.+++.|++|+. ++|++|.. . . + .||.||+|+..+.
T Consensus 143 ~~~~~l~~~~~~~G~~i~~-~~v~~l~~----~--~-------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 143 KYCQYLARELQKLGATFER-RTVTSLEQ----A--F-------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCSBGGG----T--C-------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEcccHhh----c--C-------c-CCCEEEECCCcch
Confidence 3778899999999999998 99998853 1 0 1 7999999999886
No 163
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=84.42 E-value=1.4 Score=47.15 Aligned_cols=57 Identities=16% Similarity=0.205 Sum_probs=44.9
Q ss_pred hHHHHHHHHHhc--CCEEEcCceeeeEEecCCC-CeEEEEEe----CCe--EEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTR--GCEFLDGRRVTDFIYDEER-CCISDVVC----GKE--TYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~--G~~I~l~~~V~~I~~~~~~-g~v~~V~~----~G~--~~~Ad~VV~A~p~~~ 220 (496)
+...|.+.+++. |++|+.++.|.+|..++++ |++.||.. +|+ .+.|+.||+|+....
T Consensus 168 i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 168 YKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp HHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 667888888877 9999999999999987620 27888864 343 589999999998643
No 164
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=84.35 E-value=1.6 Score=45.41 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=43.2
Q ss_pred HHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe-C---Ce--EE---ecCEEEEcCChhhHHHhh
Q 010972 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TY---SAGAVVLAVGISTLQELI 225 (496)
Q Consensus 167 aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~---G~--~~---~Ad~VV~A~p~~~~~~Ll 225 (496)
++.+.+.+ .|.+|++++.|++|..++ +++++|++ + |+ ++ .+|.||+|+......+||
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL 266 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRIL 266 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHH
Confidence 34555554 488999999999999876 68989987 3 53 33 789999999987655554
No 165
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=84.13 E-value=2 Score=44.68 Aligned_cols=52 Identities=19% Similarity=0.077 Sum_probs=43.6
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.|.++++++.|++++..+ +.+. |.+ +++++.+|.|++|+.-
T Consensus 265 i~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~-v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 265 CAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKIL-VEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEE-EEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHhhcceeecceEEEEEEecC--CeEE-EEEcCCCeEEEEEEEEcccc
Confidence 67778888999999999999999999877 4554 555 5678899999999865
No 166
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=83.93 E-value=2.5 Score=39.81 Aligned_cols=50 Identities=18% Similarity=0.194 Sum_probs=36.9
Q ss_pred HHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCCh
Q 010972 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 167 aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~ 218 (496)
.+.+.+.+ .|.+|+++++|++|..++ +++.+|++ +|+ ++.+|.||++++.
T Consensus 183 ~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 183 ITLEHAKNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 35555654 699999999999998765 44544554 454 6899999999865
No 167
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=83.66 E-value=1.2 Score=45.81 Aligned_cols=49 Identities=16% Similarity=0.281 Sum_probs=38.9
Q ss_pred HHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 168 L~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.++++|++|++++.|++|..++ ++.+|++ +|+++.||.||+++...
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~~~---~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEGNE---KVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEECSS---SCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEecCC---ceEEEEeCCCeEEEeCEEEECCCcC
Confidence 3366788899999999999998543 3445666 57789999999999875
No 168
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=83.43 E-value=1.6 Score=45.51 Aligned_cols=55 Identities=16% Similarity=0.105 Sum_probs=41.8
Q ss_pred hHHHHHHHHHhcCC--EEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~--~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|. .|+++++|+++..++++++ +.|++ +|+++.||.||+|+...
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~-w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRL-WEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTE-EEEEETTTEEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCE-EEEEECCCCEEEeCEEEECcCCC
Confidence 55556666666676 8999999999998664234 45777 57789999999999954
No 169
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=83.35 E-value=1.5 Score=41.71 Aligned_cols=48 Identities=15% Similarity=0.246 Sum_probs=36.1
Q ss_pred HHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C-----CeEEecCEEEEcCCh
Q 010972 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-----KETYSAGAVVLAVGI 218 (496)
Q Consensus 168 L~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~-----G~~~~Ad~VV~A~p~ 218 (496)
..+.+++.|++++++++|++|..++ + +.+|++ + ++++.+|.||++++.
T Consensus 195 ~~~~l~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 195 SVENLHASKVNVLTPFVPAELIGED--K-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHHSSCEEETTEEEEEEECSS--S-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHHhcCCeEEEeCceeeEEecCC--c-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 4455788899999999999998765 3 233444 2 357899999999875
No 170
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=83.32 E-value=2.7 Score=40.51 Aligned_cols=39 Identities=10% Similarity=0.232 Sum_probs=29.4
Q ss_pred hHHHHHHHHHhc-CCEEEcCceeeeEEecCC--CC--eEEEEEe
Q 010972 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEE--RC--CISDVVC 202 (496)
Q Consensus 164 l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~--~g--~v~~V~~ 202 (496)
+...|.+.+.+. |++|+.+++|++|..+++ +| +|.+|++
T Consensus 148 ~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 148 FISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp HHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred HHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 566777777775 899999999999998742 13 7888865
No 171
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=83.14 E-value=2.5 Score=41.05 Aligned_cols=57 Identities=16% Similarity=0.258 Sum_probs=43.1
Q ss_pred hHHHHHHHHHh-cCCEEEcCceeeeEEecCC-----------------CCeEEEEEe-------CC--------eEEecC
Q 010972 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEE-----------------RCCISDVVC-------GK--------ETYSAG 210 (496)
Q Consensus 164 l~~aL~~~l~~-~G~~I~l~~~V~~I~~~~~-----------------~g~v~~V~~-------~G--------~~~~Ad 210 (496)
+.+.|.+.+++ .|.+|+.++.|++|..+++ +.+|.+|++ +| .++.|+
T Consensus 162 ~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak 241 (344)
T 3jsk_A 162 FTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAP 241 (344)
T ss_dssp HHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECS
T ss_pred HHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcC
Confidence 55777777777 4899999999999988652 126777765 12 468999
Q ss_pred EEEEcCChhh
Q 010972 211 AVVLAVGIST 220 (496)
Q Consensus 211 ~VV~A~p~~~ 220 (496)
.||.|+....
T Consensus 242 ~VV~ATG~~s 251 (344)
T 3jsk_A 242 VIISTTGHDG 251 (344)
T ss_dssp EEEECCCSSS
T ss_pred EEEECCCCCc
Confidence 9999998753
No 172
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=83.10 E-value=1.6 Score=44.82 Aligned_cols=56 Identities=13% Similarity=0.082 Sum_probs=40.2
Q ss_pred chhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC----eEEecCEEEEcCCh
Q 010972 160 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK----ETYSAGAVVLAVGI 218 (496)
Q Consensus 160 ~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G----~~~~Ad~VV~A~p~ 218 (496)
+...+.+.+.+.++++|++|++|++|++|+.+ +.+..+.. +| +++.||.||.|+..
T Consensus 270 ~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 270 FEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK---QLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEECSS---EEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CCHHHHHHHHHHHHhcceeeecCceEEEEeCC---ceEEEEEecCcccceeeeccCEEEEccCC
Confidence 44447777888899999999999999998632 22222222 34 46899999998853
No 173
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=82.77 E-value=1 Score=44.57 Aligned_cols=52 Identities=15% Similarity=0.118 Sum_probs=38.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.|.+.++ +++|+++++|++|+.++ +++. |++ +|+++.||.||.|.....
T Consensus 130 l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 130 LRAILLNSLE--NDTVIWDRKLVMLEPGK--KKWT-LTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHTSC--TTSEEESCCEEEEEECS--SSEE-EEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHhhcC--CCEEEECCEEEEEEECC--CEEE-EEECCCcEEecCEEEECCCcch
Confidence 3344444332 46899999999999876 3464 666 577899999999998865
No 174
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=82.46 E-value=2.8 Score=42.73 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=41.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C---Ce--EEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~---G~--~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+|++++.|++|...++ +.+. |++ + |+ ++.+|.||+|++..
T Consensus 227 ~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~~-v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 227 MSSLVTEHMESHGTQFLKGCVPSHIKKLPT-NQLQ-VTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEE-EEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEE-EEEEeCCCCeeEEEECCEEEEcccCC
Confidence 667778888899999999999999987543 4343 443 2 54 47899999999764
No 175
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=82.09 E-value=2.1 Score=40.35 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=40.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.++++ +.|++|..++ +.+. |.+ +|+++.+|.||+|+...
T Consensus 72 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~-v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 72 MIKVFNKHIEKYEVPVLL-DIVEKIENRG--DEFV-VKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHTTTCCEEE-SCEEEEEEC----CEE-EEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEecC--CEEE-EEECCCCEEEcCEEEECcCCC
Confidence 666677777888999999 9999999876 4443 666 45789999999999875
No 176
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=81.83 E-value=2 Score=43.21 Aligned_cols=54 Identities=17% Similarity=-0.085 Sum_probs=39.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C---Ce---EEecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE---TYSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~---G~---~~~Ad~VV~A~p~~~ 220 (496)
+.+.+.+.+++.+..|+++++|++|..++ +.+. |++ + |+ ++.+|.||+|+....
T Consensus 117 l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~~-V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 117 IQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSWV-VTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHGGGGGGEECSEEEEEEEEET--TEEE-EEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeEE-EEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 44455555555677899999999998876 4443 555 3 65 789999999998743
No 177
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=81.29 E-value=2 Score=43.26 Aligned_cols=54 Identities=19% Similarity=0.264 Sum_probs=42.4
Q ss_pred hhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 162 ~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
..+.+.+.+.+++. +++++++.|++|..++ ++..+..+|+++.+|.||+|+...
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEEETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEEeCCCEEECCEEEEeeCCc
Confidence 33566777778777 9999999999998643 344466788899999999999764
No 178
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=81.07 E-value=2.7 Score=39.95 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=41.5
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.++++++ |++|..++ +.+. +.+ ++.++.+|.||+|+...
T Consensus 86 ~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~~-v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 86 LMDRMREQSTKFGTEIITET-VSKVDLSS--KPFK-LWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHTTCEEECSC-EEEEECSS--SSEE-EEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEEE-EEEEecCCCcEEEeCEEEECcCCC
Confidence 66677777888899999999 99998876 4454 555 46689999999998873
No 179
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.99 E-value=2.3 Score=43.87 Aligned_cols=55 Identities=7% Similarity=0.165 Sum_probs=41.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCC-CCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~-~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++++.+++|++|..+.+ ++.+ .|.+ +|+++.+|.||+|+...
T Consensus 269 l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~-~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 269 LAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLH-QIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceE-EEEECCCCEEEcCEEEECCCCC
Confidence 556677777888999999999999986421 1234 4666 57789999999999874
No 180
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=80.95 E-value=2 Score=44.72 Aligned_cols=51 Identities=22% Similarity=0.350 Sum_probs=39.9
Q ss_pred hcCCEEEcCceeeeEEecCCCCeEEEEEe-C---Ce--EEecC-EEEEcCChhhHHHhh
Q 010972 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAG-AVVLAVGISTLQELI 225 (496)
Q Consensus 174 ~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~---G~--~~~Ad-~VV~A~p~~~~~~Ll 225 (496)
+.|.+|++++.|++|..+++ +++++|.+ + |+ ++.|+ .||+|+......+||
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL 278 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD-RRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLL 278 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT-SBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCC-CeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhh
Confidence 46889999999999998764 57888876 2 53 68898 899999886555554
No 181
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=80.92 E-value=2.6 Score=41.32 Aligned_cols=50 Identities=10% Similarity=0.021 Sum_probs=38.7
Q ss_pred hcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh-HHHhh
Q 010972 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 174 ~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
..+.+|+++++|++++..++ ++|+ |++ +|++++||.||-|-..+. +.+.+
T Consensus 121 ~~~~~v~~~~~v~~~~~~~~-~~v~-v~~~dG~~~~adlvVgADG~~S~vR~~l 172 (412)
T 4hb9_A 121 GLANTIQWNKTFVRYEHIEN-GGIK-IFFADGSHENVDVLVGADGSNSKVRKQY 172 (412)
T ss_dssp TCTTTEECSCCEEEEEECTT-SCEE-EEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred hccceEEEEEEEEeeeEcCC-CeEE-EEECCCCEEEeeEEEECCCCCcchHHHh
Confidence 34678999999999998665 5564 666 788999999999998875 34443
No 182
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=80.89 E-value=2.2 Score=42.82 Aligned_cols=49 Identities=10% Similarity=0.008 Sum_probs=36.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---C-----CeEEecCEEEEcCC
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-----KETYSAGAVVLAVG 217 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~-----G~~~~Ad~VV~A~p 217 (496)
..+.+.+.+++.|+++++++.|++|+.+ .+. +.. + ++++.+|.||++++
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~~----~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVEDN----KMY-VTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEETT----EEE-EEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEECC----eEE-EEecccCCccccceEEEEeEEEEcCC
Confidence 5667778888999999999999999632 232 222 2 45789999999876
No 183
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=80.64 E-value=3.1 Score=39.14 Aligned_cols=52 Identities=19% Similarity=0.342 Sum_probs=40.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.++++ +.|++|..++ +.+. |.+ +|+++.+|.||+|+...
T Consensus 61 ~~~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~~-v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 61 FMQPWQEQCFRFGLKHEM-TAVQRVSKKD--SHFV-ILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHHHTTSCEEEC-SCEEEEEEET--TEEE-EEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEEcC--CEEE-EEEcCCCEEECCEEEECCCCC
Confidence 556666777778999998 7999998876 4443 545 67789999999999853
No 184
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=80.50 E-value=5 Score=40.36 Aligned_cols=42 Identities=21% Similarity=0.130 Sum_probs=32.7
Q ss_pred cCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChh
Q 010972 175 RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 175 ~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~ 219 (496)
.|++|++++.|++|+.++ +.+ .|++ +|+ ++.+|.||+|+...
T Consensus 329 ~~v~i~~~~~v~~v~~~~--~~~-~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA--QGI-ELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEET--TEE-EEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecC--CEE-EEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 588999999999998876 444 3544 354 48999999999864
No 185
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=80.48 E-value=2.7 Score=43.58 Aligned_cols=55 Identities=16% Similarity=0.027 Sum_probs=39.5
Q ss_pred hHHHHHHHHHhcC--CEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRG--CEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G--~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+...+++.+ .+|+++++|+++..+++++.+ .|++ +|+++.||.||+|+...
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w-~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTW-TVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEE-EEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeE-EEEECCCCEEEeCEEEECcCCC
Confidence 4444444445544 689999999999987642344 4777 57789999999999864
No 186
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=80.15 E-value=3.2 Score=39.35 Aligned_cols=52 Identities=13% Similarity=0.145 Sum_probs=41.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.++++ ..|++|..++ +.+. |.++++++.+|.||+|+...
T Consensus 74 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~-v~~~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 74 LAKLFADHAANYAKIREG-VEVRSIKKTQ--GGFD-IETNDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHTTSEEEET-CCEEEEEEET--TEEE-EEESSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEE-eeEEEEEEeC--CEEE-EEECCCEEEeCEEEECCCCC
Confidence 556677777788999998 7899998866 4443 66777789999999999864
No 187
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=80.14 E-value=3.4 Score=39.31 Aligned_cols=48 Identities=13% Similarity=0.176 Sum_probs=35.1
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEcCChh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G--~~~~Ad~VV~A~p~~ 219 (496)
+++.|.+|++++.|++|..+++++++.+|.+ +| +++.+|.||++++..
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 4567999999999999987652115544554 34 578999999998753
No 188
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=79.85 E-value=3.7 Score=38.65 Aligned_cols=49 Identities=18% Similarity=0.413 Sum_probs=35.8
Q ss_pred HHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe-C---Ce--EEecCEEEEcCChh
Q 010972 168 WMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 168 L~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~---G~--~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+ .|++++++++|++|..++ + +.+|++ + |+ ++.+|.||++++..
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDK--V-VKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESS--S-EEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccC--c-eeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 4444544 499999999999998754 3 444555 2 65 78999999998764
No 189
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=79.77 E-value=4.1 Score=38.65 Aligned_cols=49 Identities=14% Similarity=0.073 Sum_probs=35.8
Q ss_pred HHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCCh
Q 010972 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 167 aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~ 218 (496)
.+.+.+.+ .|.+|+++++|++|..+ +++.+|++ +|+ ++.+|.||++++.
T Consensus 192 ~~~~~l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 192 VAQARAFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 34555544 59999999999999864 33545554 454 7899999999865
No 190
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=79.33 E-value=3.2 Score=41.11 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=42.4
Q ss_pred hHHHHHHHHHh-cC-CEEEcCceeeeEEecCCCCeEEEEEe-C---C--eEEecCEEEEcCChhh-HHHhh
Q 010972 164 IFEPWMDSMRT-RG-CEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST-LQELI 225 (496)
Q Consensus 164 l~~aL~~~l~~-~G-~~I~l~~~V~~I~~~~~~g~v~~V~~-~---G--~~~~Ad~VV~A~p~~~-~~~Ll 225 (496)
+.+.|.+.+++ .| .+|+++++|++|+. ++ + |. |++ + | .++.||.||.|..... +++.+
T Consensus 109 l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~-~-v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 109 LQMILLAAVRERLGQQAVRTGLGVERIEE-RD-G-RV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET-T-EE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEECCEEEEEec-CC-c-cE-EEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 55667777765 36 48999999999998 53 3 54 443 3 6 5789999999999875 44544
No 191
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=79.30 E-value=2.1 Score=43.15 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=37.6
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEE--EEEe-CCe----EEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCIS--DVVC-GKE----TYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~--~V~~-~G~----~~~Ad~VV~A~p~ 218 (496)
+.+.+....++.|.+|+++++|++|..++++++.+ .|++ +|+ ++.||.||+|+..
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 44444455556688999999999998862212332 2444 343 7899999999985
No 192
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=78.04 E-value=2.7 Score=44.46 Aligned_cols=51 Identities=12% Similarity=0.151 Sum_probs=39.2
Q ss_pred cCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCChhhHHHhh
Q 010972 175 RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTLQELI 225 (496)
Q Consensus 175 ~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~~~~~~Ll 225 (496)
.|.+|++++.|++|..+++++++++|++ +|+ ++.||.||+++..-...++|
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL 329 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLL 329 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHH
Confidence 3789999999999998753347888876 243 68899999999876555544
No 193
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=77.92 E-value=2.3 Score=43.01 Aligned_cols=51 Identities=22% Similarity=0.302 Sum_probs=40.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+|+++++|++|.. + + +. +.. +| +++.+|.||+|++..
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~-~--~-v~-v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 214 LTAPVAESLKKLGIALHLGHSVEGYEN-G--C-LL-ANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp HHHHHHHHHHHHTCEEETTCEEEEEET-T--E-EE-EECSSSCCCEECCSCEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEe-C--C-EE-EEECCCceEEEECCEEEECcCCC
Confidence 666777888889999999999999985 4 4 43 443 35 579999999999864
No 194
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=77.63 E-value=1.5 Score=44.12 Aligned_cols=50 Identities=8% Similarity=-0.036 Sum_probs=37.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C--CeEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G--KETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~--G~~~~Ad~VV~A~p~ 218 (496)
..+.+.+.++++|+++++|+.|++|+ + +++. +.. + ++++.+|.||++++.
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~--~--~~~~-~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--P--DKVI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--S--SEEE-EECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEe--C--CceE-EEeeCCCceEeecceEEEeccC
Confidence 44556777889999999999999985 3 3343 333 3 357999999998764
No 195
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=76.55 E-value=2.8 Score=42.21 Aligned_cols=49 Identities=12% Similarity=0.182 Sum_probs=39.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.|.+|++++.|++++ + ..+. ..+|+++++|.||+|+..
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~--~--~~v~--~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAIN--G--NEIT--FKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEE--T--TEEE--ETTSCEEECSEEEECCCE
T ss_pred hHHHHHHHhhccceEEEeccEEEEec--C--Ceee--ecCCeEEeeeeEEEEece
Confidence 67778888999999999999999885 2 2232 336889999999999875
No 196
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=76.44 E-value=3.7 Score=40.13 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+|+++++|++|. . .. |++ +|+ +.+|.||+|+...
T Consensus 185 ~~~~l~~~l~~~gV~i~~~~~v~~i~--~--~~---v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 185 LSNMIKDMLEETGVKFFLNSELLEAN--E--EG---VLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHHHHHHTTEEEECSCCEEEEC--S--SE---EEETTEE-EECSCEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE--e--eE---EEECCCE-EEcCEEEECcCCC
Confidence 56777888889999999999999997 3 22 445 566 9999999998753
No 197
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=75.84 E-value=0.42 Score=46.11 Aligned_cols=44 Identities=25% Similarity=0.348 Sum_probs=28.9
Q ss_pred CCCCCCEEEcCCCccCCCCCCC-CCCCCccccccCcChHHHHHHHHHHc
Q 010972 361 FTSFPNLFMAGDWITTRHGSWR-GLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 361 ~t~i~gL~lAGd~t~~~~G~~~-~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
.|.+||||.|||......|... |. ..-+++.||+ +||+.|++.|
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp-~~g~mi~SG~---~AAe~I~~~l 324 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGP-TFGAMALSGV---HAAEQILKHF 324 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCS-CCHHHHHHHH---HHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCch-HHHHHHHHHH---HHHHHHHHHh
Confidence 4678999999997642222100 00 1334567888 9999999876
No 198
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=74.62 E-value=4 Score=39.45 Aligned_cols=52 Identities=12% Similarity=0.125 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhcC-CEEEcCceeeeEEecCCCCeEEEEEe-CCeEEe-cCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC-GKETYS-AGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G-~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~-Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.| .+|++++.|++|..++ +.+ .|++ +|+++. +|.||++++.
T Consensus 216 ~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 216 TRQRLGNVIKQGARIEMNVHYTVKDIDFNN--GQY-HISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHHHHTTCCEEEECSCCEEEEEEET--TEE-EEEESSSCCEEESSCCEECCCB
T ss_pred HHHHHHHHHhhCCcEEEecCcEEEEEEecC--Cce-EEEecCCeEeccCCceEEeecc
Confidence 4466777778887 9999999999998655 334 3555 676664 5999998875
No 199
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=74.05 E-value=6.5 Score=37.01 Aligned_cols=52 Identities=13% Similarity=0.203 Sum_probs=40.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.++++++ |+.|..++ +.+. |..+|+++.+|.||+|+...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~-v~~i~~~~--~~~~-v~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 64 LMERMHEHATKFETEIIFDH-INKVDLQN--RPFR-LNGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEECSS--SSEE-EEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEEee-eeEEEecC--CEEE-EEeCCCEEEcCEEEECCCCC
Confidence 55666667778899999997 99998765 4454 44467789999999999863
No 200
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=73.46 E-value=4.6 Score=37.47 Aligned_cols=59 Identities=12% Similarity=0.137 Sum_probs=42.4
Q ss_pred ceEEecCCchhhhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 152 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 152 ~~~~~~GG~~~~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
...+...+... +.+.+.+.+++.|++|+. ++|++|..+ + .|++ +|+++.+|.||++++.
T Consensus 165 ~v~~v~~~~~~-~~~~~~~~l~~~gv~i~~-~~v~~i~~~---~---~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 165 ETTFFTNGIVE-PDADQHALLAARGVRVET-TRIREIAGH---A---DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEEEECTTTCC-CCHHHHHHHHHTTCEEEC-SCEEEEETT---E---EEEETTSCEEEESEEEECCEE
T ss_pred cEEEEECCCCC-CCHHHHHHHHHCCcEEEc-ceeeeeecC---C---eEEeCCCCEEEEEEEEEccCc
Confidence 44555443333 566778888899999995 999998642 2 3455 6788999999999864
No 201
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=73.02 E-value=1.2 Score=44.04 Aligned_cols=44 Identities=20% Similarity=0.132 Sum_probs=34.5
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
+++.|.+|++++.|+.++.+++ + . .|.+ +|+++.+|.||+++|.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~-~-~-~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTE-A-M-TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETT-T-T-EEEETTSCEEECSEEEECCCE
T ss_pred HHhcCcEEEeCceEEEEEeccc-c-e-EEEcCCCcEEEeeEEEEecCc
Confidence 3567899999999999988764 2 2 2555 6889999999998764
No 202
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=71.99 E-value=8.6 Score=40.94 Aligned_cols=50 Identities=16% Similarity=0.196 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCC--eEEecCEEEEcCChh
Q 010972 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 165 ~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G--~~~~Ad~VV~A~p~~ 219 (496)
...+.+.+++.|++|++++.|++|. + +.+. +..+| +++.+|.||++++..
T Consensus 576 ~~~~~~~l~~~GV~v~~~~~v~~i~--~--~~v~-~~~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 576 GWIHRTTLLSRGVKMIPGVSYQKID--D--DGLH-VVINGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEE--T--TEEE-EEETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHHhcCCEEEeCcEEEEEe--C--CeEE-EecCCeEEEEeCCEEEECCCcc
Confidence 3445677888999999999999987 3 2243 33566 579999999999764
No 203
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=70.79 E-value=6.4 Score=37.53 Aligned_cols=51 Identities=20% Similarity=0.225 Sum_probs=38.7
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEE-Ee-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDV-VC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V-~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.++++++ |++|.. + +.+. | .+ +|+++.+|.||+|+...
T Consensus 73 ~~~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~~-v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 73 LMDEMREQALRFGADLRMED-VESVSL-H--GPLK-SVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEEC-S--SSSE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEee-EEEEEe-C--CcEE-EEEeCCCCEEEeCEEEECCCCC
Confidence 55666667777899999998 999987 3 3333 4 55 56789999999999864
No 204
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=70.42 E-value=7 Score=36.14 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=37.5
Q ss_pred hHHHHHHHHHhc-CCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~-G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++. +.+++ ++.|++|..++ +.+ .|.+ +|+++.+|.||+|+...
T Consensus 58 ~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~--~~~-~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 58 IIAEARRQIERYPTIHWV-EGRVTDAKGSF--GEF-IVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHTTCTTEEEE-ESCEEEEEEET--TEE-EEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHhcCCeEEE-EeEEEEEEEcC--CeE-EEEECCCCEEEcCEEEECCCCC
Confidence 555666666666 45554 56999999876 444 4666 57789999999999874
No 205
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=70.39 E-value=7.8 Score=40.14 Aligned_cols=57 Identities=12% Similarity=0.178 Sum_probs=41.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C---C--eEEecCEEEEcCChhh-HHHhhc
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST-LQELIK 226 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~---G--~~~~Ad~VV~A~p~~~-~~~Ll~ 226 (496)
+.+.|.+.+++. |+++++|++|+.+++ .|+ |++ + | .+++||.||.|...+. +.+.+.
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~--~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDD--HVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSS--CEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCC--EEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 455566666654 999999999998774 465 443 3 5 4789999999999875 455553
No 206
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=69.84 E-value=6.7 Score=41.06 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=39.6
Q ss_pred HhcCCEEEcCceeeeEEecCC--CCeEEEEEe---CCe--EEecC-EEEEcCChhhHHHhh
Q 010972 173 RTRGCEFLDGRRVTDFIYDEE--RCCISDVVC---GKE--TYSAG-AVVLAVGISTLQELI 225 (496)
Q Consensus 173 ~~~G~~I~l~~~V~~I~~~~~--~g~v~~V~~---~G~--~~~Ad-~VV~A~p~~~~~~Ll 225 (496)
.+.+.+|++++.|++|..+++ +++++||+. +|+ ++.|+ -||++...-..-+||
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL 298 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTIL 298 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHH
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHH
Confidence 345789999999999998721 278999986 354 56786 599988876665554
No 207
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=69.15 E-value=8.7 Score=36.31 Aligned_cols=53 Identities=21% Similarity=0.145 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEec--CCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~--~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+++. ..|++|..+ ++ +.+. |.+ +|+++.+|.||+|+...
T Consensus 67 ~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~-~~~~-v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 67 LAQRMHQQAEKFGAKVEM-DEVQGVQHDATSH-PYPF-TVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCEEEEEECTTSS-SCCE-EEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEe-eeEEEEEeccCCC-ceEE-EEECCCCEEEeCEEEECcCCC
Confidence 556667777788999987 689999876 42 2132 444 67889999999999874
No 208
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=68.71 E-value=6.5 Score=38.33 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=33.9
Q ss_pred HHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCCh
Q 010972 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (496)
Q Consensus 171 ~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~ 218 (496)
.+++.|.+++++++|+.|..++ ..| ..+|+++.+|++|+|+..
T Consensus 69 ~~~~~~v~~~~g~~v~~id~~~--~~V---~~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 69 WYRKRGIEIRLAEEAKLIDRGR--KVV---ITEKGEVPYDTLVLATGA 111 (367)
T ss_dssp HHHHHTEEEECSCCEEEEETTT--TEE---EESSCEEECSEEEECCCE
T ss_pred HHHhCCcEEEECCEEEEEECCC--CEE---EECCcEEECCEEEECCCC
Confidence 3456799999999999998654 333 356788999999999985
No 209
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=68.68 E-value=6.9 Score=40.27 Aligned_cols=50 Identities=10% Similarity=0.259 Sum_probs=37.3
Q ss_pred HHHHHHHh-cCCEEEcCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEcCCh
Q 010972 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 167 aL~~~l~~-~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G~--~~~Ad~VV~A~p~ 218 (496)
.+.+.+++ .|.+|++++.|++|..++ +++.+|++ +|+ ++.+|.||++++.
T Consensus 395 ~l~~~l~~~~gV~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 395 VLQDKVRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHTTCTTEEEECSEEEEEEEECS--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEcCC--CcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 35566666 589999999999998765 55666655 243 6899999998774
No 210
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=68.29 E-value=6.4 Score=39.33 Aligned_cols=45 Identities=24% Similarity=0.303 Sum_probs=35.3
Q ss_pred HHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 170 ~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+.+++.|.+++++++|+.|..++ .. |.+ +|+++.+|.||+|+...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~--~~---v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDR--QQ---VILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEcCCCC
Confidence 34566799999999999998755 33 445 57789999999999863
No 211
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=68.20 E-value=6.5 Score=40.66 Aligned_cols=54 Identities=15% Similarity=0.203 Sum_probs=40.2
Q ss_pred HHhcCCEEEcCceeeeEEecCC-CCeEEEEEe---CCe--EE---ecCEEEEcCChhhHHHhh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC---GKE--TY---SAGAVVLAVGISTLQELI 225 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~-~g~v~~V~~---~G~--~~---~Ad~VV~A~p~~~~~~Ll 225 (496)
+++.|.+|++++.|++|..+++ ++++++|+. +|+ ++ .++.||+|+......+||
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL 266 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLL 266 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHH
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHH
Confidence 3456899999999999998762 137888876 354 34 468899999887665554
No 212
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=67.60 E-value=6 Score=41.47 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=39.4
Q ss_pred HhcCCEEEcCceeeeEEecCCC--CeEEEEEe---CCe--EEec-CEEEEcCChhhHHHhh
Q 010972 173 RTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GKE--TYSA-GAVVLAVGISTLQELI 225 (496)
Q Consensus 173 ~~~G~~I~l~~~V~~I~~~~~~--g~v~~V~~---~G~--~~~A-d~VV~A~p~~~~~~Ll 225 (496)
++.+.+|++++.|++|..++++ +++++|.. +|+ ++.| +.||+|+..-...+||
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL 302 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLIL 302 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHH
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHH
Confidence 3457899999999999986421 37888875 464 5678 8899999886555554
No 213
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=66.94 E-value=8.8 Score=38.78 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=30.8
Q ss_pred cCCEEEcCceeeeEEecCCCC-eEEEEEe----------------CC--eEEecCEEEEcCCh
Q 010972 175 RGCEFLDGRRVTDFIYDEERC-CISDVVC----------------GK--ETYSAGAVVLAVGI 218 (496)
Q Consensus 175 ~G~~I~l~~~V~~I~~~~~~g-~v~~V~~----------------~G--~~~~Ad~VV~A~p~ 218 (496)
+|.+|++++.+.+|..+++ + ++.+|++ +| +++.+|.||.++..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 7899999999999986532 3 4555543 23 46788888888764
No 214
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=66.63 E-value=7 Score=40.84 Aligned_cols=52 Identities=15% Similarity=0.237 Sum_probs=39.1
Q ss_pred hcCCEEEcCceeeeEEecCCCCeEEEEEe--C-Ce--EEecC-EEEEcCChhhHHHhh
Q 010972 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC--G-KE--TYSAG-AVVLAVGISTLQELI 225 (496)
Q Consensus 174 ~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~-G~--~~~Ad-~VV~A~p~~~~~~Ll 225 (496)
+.+.+|++++.|++|..+++++++++|+. . |+ ++.|+ .||+++..-...+||
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL 275 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLL 275 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHH
Confidence 45789999999999999832278999987 2 54 56774 699998876655554
No 215
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=66.23 E-value=12 Score=38.30 Aligned_cols=55 Identities=20% Similarity=0.180 Sum_probs=39.2
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCC--CeEEEEEe---CC-e--EEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GK-E--TYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~--g~v~~V~~---~G-~--~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|++++.|++|...+++ +.+. |+. +| + ++.+|.||+|++..
T Consensus 252 ~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~-v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 252 MANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLR-VVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEE-EEEEESSSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEE-EEEEECCCcEEEEEECCEEEEecCCc
Confidence 6677778888999999999999888764320 2332 332 44 2 56899999999763
No 216
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=64.52 E-value=7.1 Score=38.65 Aligned_cols=43 Identities=26% Similarity=0.285 Sum_probs=34.5
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+++.|.+++++++|+.|..++ .. |.+ +|+++.+|++|+|+...
T Consensus 67 ~~~~~i~~~~~~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 67 YGEARIDMLTGPEVTALDVQT--RT---ISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHTTCEEEESCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEccCCc
Confidence 456799999999999998765 33 445 67789999999999853
No 217
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=61.94 E-value=9.5 Score=42.56 Aligned_cols=49 Identities=22% Similarity=0.323 Sum_probs=37.1
Q ss_pred HHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C-------C--eEEecCEEEEcCCh
Q 010972 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-------K--ETYSAGAVVLAVGI 218 (496)
Q Consensus 169 ~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~-------G--~~~~Ad~VV~A~p~ 218 (496)
.+.+++.|++|++++.|++|..+++ +++.+|++ + | +++.+|.||+++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 5567888999999999999987412 44555554 2 4 57899999999875
No 218
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=61.62 E-value=8.1 Score=36.77 Aligned_cols=44 Identities=18% Similarity=0.215 Sum_probs=32.4
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEcCCh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGI 218 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~----~G--~~~~Ad~VV~A~p~ 218 (496)
+++.|.+|+++++|++|..++ + +.+|++ +| +++.+|.||++++.
T Consensus 201 ~~~~gV~v~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 201 RNNDKIRFLTNHTVVAVDGDT--T-VTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp HHCTTEEEECSEEEEEEECSS--S-CCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred hccCCcEEEeCceeEEEecCC--c-EeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 456799999999999998654 2 223333 34 57899999998875
No 219
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=60.91 E-value=9.5 Score=35.77 Aligned_cols=50 Identities=6% Similarity=0.084 Sum_probs=37.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcC
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAV 216 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~ 216 (496)
+.+.+.+.+++.|.+++.++ |+.+..++ +++..|++ +|+++.+|.||+++
T Consensus 182 ~~~~~~~~l~~~g~~~~~~~-v~~~~~~~--~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 182 LSQTIMDELSNKNIPVITES-IRTLQGEG--GYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp CCHHHHHHHHTTTCCEECSC-EEEEESGG--GCCCEEEETTSCEECCCEEEECC
T ss_pred chhhhhhhhhccceeEeeee-EEEeecCC--Ceeeeeeccccceeeecceeeee
Confidence 45667788888899998875 77777665 56767777 57788888877654
No 220
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=60.42 E-value=19 Score=40.33 Aligned_cols=48 Identities=23% Similarity=0.235 Sum_probs=36.3
Q ss_pred HHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-------C-------C--eEEecCEEEEcCCh
Q 010972 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-------G-------K--ETYSAGAVVLAVGI 218 (496)
Q Consensus 169 ~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-------~-------G--~~~~Ad~VV~A~p~ 218 (496)
.+.+++.|+++++++.|++|..++ |++.+|++ + | .++.||.||+|+..
T Consensus 377 ~~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 377 VELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 355677899999999999998754 66766543 1 2 36899999999864
No 221
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=60.18 E-value=6.6 Score=42.33 Aligned_cols=49 Identities=12% Similarity=0.079 Sum_probs=35.2
Q ss_pred HHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CC-eE------------------EecCEEEEcCChh
Q 010972 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ET------------------YSAGAVVLAVGIS 219 (496)
Q Consensus 166 ~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G-~~------------------~~Ad~VV~A~p~~ 219 (496)
..+.+.+++.|++|++++.|++|..+ .+. +.. ++ ++ +.||.||++++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~~----~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEPG----RME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETT----EEE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEECC----eEE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 45667778899999999999999732 232 322 33 23 8999999998853
No 222
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=60.15 E-value=5.5 Score=41.36 Aligned_cols=39 Identities=18% Similarity=0.037 Sum_probs=30.3
Q ss_pred CCC-CCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 360 GFT-SFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 360 ~~t-~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
.++ .++|||.|||...- .|. +-+|..+|. ++|+.|++.+
T Consensus 503 ~~~~~~~gly~~GegaG~-a~g------i~~Aa~~G~---~~a~~i~~~~ 542 (549)
T 3nlc_A 503 FQSVNLKGFYPAGEGAGY-AGG------ILSAGIDGI---KVAEAVARDI 542 (549)
T ss_dssp TSCTTCBTEEECHHHHTS-CCS------HHHHHHHHH---HHHHHHHHHH
T ss_pred ceECCcCCEEEccccCCh-hhH------HHHHHHHHH---HHHHHHHHHh
Confidence 345 58999999997543 333 578889999 9999999876
No 223
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=59.97 E-value=2.6 Score=38.15 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=30.1
Q ss_pred CCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 362 TSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 362 t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
+.+||||.+||.. +.|. ...|+.+|. .+|+.|++.+
T Consensus 196 t~~p~iya~G~~a--~~g~------~~~~~~~g~---~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV--REGD------YARMSEEGK---RLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT--SCCC------HHHHHHHHH---HHHHHHHHHC
T ss_pred cccccceeeeecc--cCcc------HHHHHHHHH---HHHHHHHhhc
Confidence 5789999999977 4565 667789888 9999999876
No 224
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=59.25 E-value=14 Score=34.49 Aligned_cols=53 Identities=17% Similarity=0.159 Sum_probs=34.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
+.+...+.+.+.+.....+..|..+...++ +... |.+ +|+++.+|+||+|+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 62 FKEIGLNEVMKYPSVHYYEKTVVMITKQST-GLFE-IVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHTTSTTEEEEECCEEEEEECTT-SCEE-EEETTCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCEEEEeeEEEEeeecCC-CcEE-EEECCCCEEEeCEEEEccCC
Confidence 333344445555666666667777776554 4443 555 6889999999999986
No 225
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=58.54 E-value=7.1 Score=40.69 Aligned_cols=53 Identities=21% Similarity=0.137 Sum_probs=38.6
Q ss_pred HhcCCEEEcCceeeeEEec---CCCCeEEEEEe--C-C-e--EEec-CEEEEcCChhhHHHhh
Q 010972 173 RTRGCEFLDGRRVTDFIYD---EERCCISDVVC--G-K-E--TYSA-GAVVLAVGISTLQELI 225 (496)
Q Consensus 173 ~~~G~~I~l~~~V~~I~~~---~~~g~v~~V~~--~-G-~--~~~A-d~VV~A~p~~~~~~Ll 225 (496)
.+.+.+|++++.|++|..+ ++.++++||+. + | + ++.| +-||++...-...+||
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL 281 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILL 281 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHH
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHH
Confidence 3457899999999999987 21147888876 2 4 3 5677 5699998876665554
No 226
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=57.90 E-value=15 Score=37.59 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=39.4
Q ss_pred cCCEEEcCceeeeEEecCCCCeEEEEEe--CC--eEEecCEEEEcCChhhHHHhhc
Q 010972 175 RGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGISTLQELIK 226 (496)
Q Consensus 175 ~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G--~~~~Ad~VV~A~p~~~~~~Ll~ 226 (496)
.+.+|.+++.|++|..++ +++++|.. ++ .++.|+.||++...-...+||-
T Consensus 224 ~nl~v~~~~~v~~i~~~~--~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl 277 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEG--NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLM 277 (526)
T ss_dssp TTEEEECSCEEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCeEEEeCCEEEEEEecC--CeEEEEEEEecCceEEEeecceEEcccccCCcchhh
Confidence 467999999999999987 78888876 33 3578999999988766666653
No 227
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=56.66 E-value=5 Score=37.60 Aligned_cols=52 Identities=21% Similarity=0.271 Sum_probs=36.7
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEE-EEeCCeEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISD-VVCGKETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~-V~~~G~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.|.+++++ +|.+| .+++.+.+.. +.+++ ++.+|+||+|+..
T Consensus 64 ~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 64 FMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 5566667777789999999 89899 5441122321 33345 8999999999986
No 228
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=56.31 E-value=12 Score=37.09 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=35.5
Q ss_pred HHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 169 ~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
.+.+++.|.+++++++|+.|..++ .. |.+ +|+++.+|++|+|+..
T Consensus 72 ~~~~~~~~i~~~~~~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 72 AQFWEDKAVEMKLGAEVVSLDPAA--HT---VKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp HHHHHHTTEEEEETCCEEEEETTT--TE---EEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHCCcEEEeCCEEEEEECCC--CE---EEECCCCEEEeeEEEEccCC
Confidence 344567899999999999998765 33 445 5778999999999974
No 229
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=56.12 E-value=14 Score=37.17 Aligned_cols=51 Identities=18% Similarity=0.141 Sum_probs=35.8
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~---~G~--~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+ ..+|+++++|++|..+++ +++. |++ +|+ ++.+|.||+|++..
T Consensus 216 ~~~~l~~~l---~v~i~~~~~v~~i~~~~~-~~v~-v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 216 IVNTLLSIL---KLNIKFNSPVTEVKKIKD-DEYE-VIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHH---CCCEECSCCEEEEEEEET-TEEE-EEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHhcC---EEEEEECCEEEEEEEcCC-CcEE-EEEEecCCceEEEEcCEEEECcCCC
Confidence 444444444 499999999999987652 2353 555 354 79999999999764
No 230
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=55.97 E-value=15 Score=37.19 Aligned_cols=46 Identities=13% Similarity=0.255 Sum_probs=34.7
Q ss_pred HHHhcCCEEEcCceeeeEEecCCCCeEEEEEeC--CeEEecCEEEEcCChh
Q 010972 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGIS 219 (496)
Q Consensus 171 ~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~--G~~~~Ad~VV~A~p~~ 219 (496)
.+++.|.+++++++|+.|..++ +.+. |..+ ++++.+|+||+|+...
T Consensus 101 ~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 101 ELESLGAKVYMESPVQSIDYDA--KTVT-ALVDGKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp HHHHTTCEEETTCCEEEEETTT--TEEE-EEETTEEEEEECSEEEECCCEE
T ss_pred HHHhCCCEEEeCCEEEEEECCC--CEEE-EEeCCcEEEEECCEEEECCCCC
Confidence 3456799999999999998765 4453 4423 3579999999999853
No 231
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=55.59 E-value=24 Score=36.68 Aligned_cols=55 Identities=18% Similarity=0.164 Sum_probs=38.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEec------C-CCCeEEEEE--e-CCeEEe--cCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD------E-ERCCISDVV--C-GKETYS--AGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~------~-~~g~v~~V~--~-~G~~~~--Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|++|++++.|++|... + +.+++. |. . +|+++. +|.||+|+...
T Consensus 328 ~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHYTDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEETTSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEeCCCcEEeccCCEEEEEeCCc
Confidence 5666777788899999999999888642 1 113332 32 2 566554 99999998764
No 232
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=55.44 E-value=19 Score=34.96 Aligned_cols=43 Identities=23% Similarity=0.186 Sum_probs=34.3
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+++.|.+++++++|+.|..++ .. |.++++++.+|++|+|+...
T Consensus 70 ~~~~~v~~~~~~~v~~i~~~~--~~---v~~~~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 70 AEQLNARILTHTRVTGIDPGH--QR---IWIGEEEVRYRDLVLAWGAE 112 (384)
T ss_dssp HHHTTCEEECSCCCCEEEGGG--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHhCCcEEEeCCEEEEEECCC--CE---EEECCcEEECCEEEEeCCCC
Confidence 456799999999999998755 33 45666789999999999863
No 233
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=55.28 E-value=7.6 Score=39.22 Aligned_cols=46 Identities=22% Similarity=0.254 Sum_probs=32.4
Q ss_pred HHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-------------------CC--eEEecCEEEEcCCh
Q 010972 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-------------------GK--ETYSAGAVVLAVGI 218 (496)
Q Consensus 170 ~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-------------------~G--~~~~Ad~VV~A~p~ 218 (496)
+.+++.|+++++++.|++|.. + |++.+|++ +| .++.||.||+|++.
T Consensus 310 ~~~~~~Gv~~~~~~~~~~i~~-~--g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 310 AHAEEEGVEFIWQAAPEGFTG-D--TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHTTCEEECCSSSCCEEE-E--EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHCCCEEEeCCCceEEeC-C--CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 456778999999999999974 3 44433322 22 36789999998875
No 234
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=54.97 E-value=10 Score=38.02 Aligned_cols=46 Identities=22% Similarity=0.306 Sum_probs=35.5
Q ss_pred HHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CCeEEecCEEEEcCCh
Q 010972 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGI 218 (496)
Q Consensus 170 ~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~~~~Ad~VV~A~p~ 218 (496)
+.+++.|.+++++++|++|..++ +.+. +.. +++++.+|++|+|+..
T Consensus 66 ~~~~~~gi~~~~~~~V~~id~~~--~~v~-v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 66 EELRRQKIQLLLNREVVAMDVEN--QLIA-WTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp HHHHHTTEEEECSCEEEEEETTT--TEEE-EEETTEEEEEECSEEEECCCC
T ss_pred HHHHHCCCEEEECCEEEEEECCC--CEEE-EEecCceEEEEcCEEEECCCc
Confidence 34566799999999999998876 4453 432 3568999999999976
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=54.87 E-value=9.1 Score=37.86 Aligned_cols=41 Identities=29% Similarity=0.340 Sum_probs=32.9
Q ss_pred HhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 173 ~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
++.|.+++++++|+.|..++ .. |.+ +|+++.+|++|+|+..
T Consensus 70 ~~~~v~~~~~~~v~~i~~~~--~~---v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDPQA--HT---VALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp TSCSCEEEETCCEEEEETTT--TE---EEETTSCEEECSEEEECCCE
T ss_pred HHCCCEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCC
Confidence 45689999999999998754 33 445 5778999999999986
No 236
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=54.83 E-value=18 Score=36.80 Aligned_cols=55 Identities=15% Similarity=0.012 Sum_probs=37.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCC-----eEEEEEe-C---C--eEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-----CISDVVC-G---K--ETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g-----~v~~V~~-~---G--~~~~Ad~VV~A~p~ 218 (496)
+.+-|....++.+..|++|++|++|+..++++ ..+.|++ + | +++.|++||+|++.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 44445444555677899999999998754311 1344655 2 2 36899999999984
No 237
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=54.58 E-value=22 Score=36.92 Aligned_cols=48 Identities=13% Similarity=0.052 Sum_probs=36.2
Q ss_pred HHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEcCCh
Q 010972 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 168 L~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~--~~~Ad~VV~A~p~ 218 (496)
+....+..|.++++++.|++|..++ +.+. +.. +|+ ++.+|+||+|+..
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~~--~~v~-v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKEE--KTIT-IKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCC--CEEE-EeecCCCCEEEEeCCEEEECCCC
Confidence 3344456799999999999998876 5554 443 455 6899999999985
No 238
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=53.73 E-value=6.5 Score=37.00 Aligned_cols=52 Identities=17% Similarity=0.176 Sum_probs=36.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.........+.+..+..+..+....... .. .+..+++++.||++|+|+...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 64 LSTKMFEHAKKFGAVYQYGDIKSVEDKGE--YK--VINFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCEEEECSS--CE--EEECSSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhhccccccceeeeeeeeeec--ce--eeccCCeEEEeceeEEcccCc
Confidence 33444455566678888888887766544 22 245578899999999999863
No 239
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=53.65 E-value=22 Score=35.38 Aligned_cols=47 Identities=17% Similarity=0.282 Sum_probs=34.8
Q ss_pred HHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEcCChh
Q 010972 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 170 ~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~--~~~Ad~VV~A~p~~ 219 (496)
+.+++.|.++++++.|+.|..++ +.+. +.. +|+ ++.+|++|+|+...
T Consensus 64 ~~~~~~gv~~~~~~~v~~i~~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 64 EKMESRGVNVFSNTEITAIQPKE--HQVT-VKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp HHHHHTTCEEEETEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEECCEEEEEeCCC--CEEE-EEecCCCceEEEeCCEEEEcCCCC
Confidence 33456799999999999998766 4554 443 354 48999999999753
No 240
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=51.82 E-value=8.8 Score=36.50 Aligned_cols=41 Identities=10% Similarity=0.149 Sum_probs=30.2
Q ss_pred CCCCCCCEEEcC--CCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHcC
Q 010972 360 GFTSFPNLFMAG--DWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQ 409 (496)
Q Consensus 360 ~~t~i~gL~lAG--d~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg 409 (496)
..+..+|+|.+| |.+.+..+. +.+|+..|. .+|+.|.+.+.
T Consensus 310 ~~t~~~~vya~Gd~d~~~~~~~~------~~~A~~~g~---~~a~~i~~~l~ 352 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGMASAT------LIGVTRYAR---EAVRQVTAYCA 352 (357)
T ss_dssp BBSSCTTEEECSSCGGGSTTCSS------TTTHHHHHH---HHHHHHHHHTC
T ss_pred cCCCCCCeEEeccccccccchhh------hhhhHHHHH---HHHHHHHHHHH
Confidence 346789999999 544433333 567888888 99999998873
No 241
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=51.80 E-value=23 Score=35.40 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=34.4
Q ss_pred HHHhcCCEEEcCceeeeEEecCCCCeEEEEEe--C--CeEEecCEEEEcCCh
Q 010972 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGI 218 (496)
Q Consensus 171 ~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~--G~~~~Ad~VV~A~p~ 218 (496)
.+++.|.+++++++|+.|..++ +.+. +.. + ++++.+|++|+|+..
T Consensus 67 ~~~~~gv~~~~~~~v~~i~~~~--~~v~-v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 67 ELSNLGANVQMRHQVTNVDPET--KTIK-VKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp HHHHTTCEEEESEEEEEEEGGG--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHcCCEEEeCCEEEEEEcCC--CEEE-EEecCCCceEEEECCEEEEccCC
Confidence 3456799999999999998766 4554 443 2 457999999999985
No 242
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=51.72 E-value=26 Score=35.29 Aligned_cols=43 Identities=16% Similarity=0.201 Sum_probs=33.3
Q ss_pred hcCCEEEcCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEcCChh
Q 010972 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 174 ~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~--~~~Ad~VV~A~p~~ 219 (496)
..|.++++++.|+.|..++ +.+. +.. +|+ ++.+|++|+|+...
T Consensus 105 ~~gv~~~~~~~v~~i~~~~--~~v~-v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTEK--KIVY-AEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp TTCCEEESSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred hcCCEEEeCCEEEEEECCC--CEEE-EEEcCCCceEEEEcCEEEECCCCc
Confidence 3489999999999998766 4554 544 355 78999999999853
No 243
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=51.33 E-value=12 Score=37.21 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=32.5
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+++.|.+++.+ .|++|..++ .. |++ +|+++.+|++|+|+.+.
T Consensus 66 ~~~~gv~~i~~-~v~~Id~~~--~~---V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHHCCcEEEEe-EEEEEECCC--CE---EEECCCCEEECCEEEEeCCCC
Confidence 34568898876 699998765 43 456 67899999999999874
No 244
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=48.53 E-value=11 Score=38.34 Aligned_cols=40 Identities=18% Similarity=0.245 Sum_probs=32.5
Q ss_pred hcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 174 ~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
+.|.+++++++|++|..++ .. |.+ +|+++.+|++|+|+..
T Consensus 102 ~~gv~~~~g~~v~~id~~~--~~---V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD--NM---VKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG--TE---EEETTSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCC
Confidence 4588999999999998765 43 345 6778999999999975
No 245
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=48.38 E-value=18 Score=35.93 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=34.8
Q ss_pred HHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhh
Q 010972 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (496)
Q Consensus 168 L~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~ 220 (496)
+.+.+++.|++++. ..|++|..++ +. |++ +|+++.+|+||+|+....
T Consensus 65 l~~~~~~~gv~~~~-~~v~~id~~~--~~---V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 65 IRHYVERKGIHFIA-QSAEQIDAEA--QN---ITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp CHHHHHTTTCEEEC-SCEEEEETTT--TE---EEETTSCEEECSEEEECCCCEE
T ss_pred HHHHHHHCCCEEEE-eEEEEEEcCC--CE---EEECCCCEEECCEEEECCCCCc
Confidence 44556677999974 6999998765 43 455 577899999999998743
No 246
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=46.85 E-value=30 Score=35.59 Aligned_cols=43 Identities=14% Similarity=0.022 Sum_probs=33.3
Q ss_pred HhcCCEEEcCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEcCCh
Q 010972 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 173 ~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~--~~~Ad~VV~A~p~ 218 (496)
+..|.+++++++|++|..++ +.+. +.. +|+ ++.+|+||+|+..
T Consensus 69 ~~~~i~~~~~~~V~~id~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRAA--KLVT-VRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHHCCEEETTEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred HhcCcEEEECCEEEEEECCC--CEEE-EEecCCCCeEEEECCEEEECCCC
Confidence 44699999999999998766 5554 443 243 7899999999986
No 247
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=45.55 E-value=27 Score=34.23 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=34.4
Q ss_pred HHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 169 ~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
.+.+.+.|.++++ ++|++|..++ .. |.+ +|+++.+|++|+|+..
T Consensus 64 ~~~~~~~~i~~~~-~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 64 EKFFQDQAIELIS-DRMVSIDREG--RK---LLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp HHHHHHTTEEEEC-CCEEEEETTT--TE---EEESSSCEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEE-EEEEEEECCC--CE---EEECCCCEEECCEEEEeeCC
Confidence 3445677999999 9999998765 43 345 6778999999999975
No 248
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.11 E-value=38 Score=33.77 Aligned_cols=50 Identities=18% Similarity=0.259 Sum_probs=34.7
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC-eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G-~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+++.++.+. + ++ +.+. |.+ +| +++.+|+||+|+...
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v~-V~~~~G~~~i~~d~lViATGs~ 144 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF-V--DA--NTVR-VVNGDSAQTYTFKNAIIATGSR 144 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE-E--ET--TEEE-EEETTEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE-c--cC--CeEE-EEeCCCcEEEEeCEEEEecCCC
Confidence 33445566677899999998764 3 33 3453 655 45 579999999999863
No 249
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=45.02 E-value=18 Score=36.48 Aligned_cols=41 Identities=22% Similarity=0.100 Sum_probs=28.8
Q ss_pred cCCEEEcCceeeeEEecCCCCeEEEEEe-----------------CC--eEEecCEEEEcCCh
Q 010972 175 RGCEFLDGRRVTDFIYDEERCCISDVVC-----------------GK--ETYSAGAVVLAVGI 218 (496)
Q Consensus 175 ~G~~I~l~~~V~~I~~~~~~g~v~~V~~-----------------~G--~~~~Ad~VV~A~p~ 218 (496)
.|.+|++++.|.+|..+ +++.+|++ +| +++.||.||.++..
T Consensus 265 ~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp EEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred ceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 68999999999999754 23333332 23 35788888888764
No 250
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=44.61 E-value=23 Score=34.70 Aligned_cols=49 Identities=12% Similarity=0.245 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCe----EEecCEEEEcCChh
Q 010972 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKE----TYSAGAVVLAVGIS 219 (496)
Q Consensus 166 ~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~----~~~Ad~VV~A~p~~ 219 (496)
..+.+.+++.|.+++.+ .|++|..++ ..|. +. +|+ ++.+|.||+|+...
T Consensus 60 ~~~~~~~~~~gv~~~~~-~v~~i~~~~--~~V~-~~-~g~~~~~~~~~d~lViAtG~~ 112 (409)
T 3h8l_A 60 VDLSEALPEKGIQFQEG-TVEKIDAKS--SMVY-YT-KPDGSMAEEEYDYVIVGIGAH 112 (409)
T ss_dssp EEHHHHTGGGTCEEEEC-EEEEEETTT--TEEE-EE-CTTSCEEEEECSEEEECCCCE
T ss_pred HHHHHHHhhCCeEEEEe-eEEEEeCCC--CEEE-Ec-cCCcccceeeCCEEEECCCCC
Confidence 34556667789999988 999998765 4442 22 332 48999999998763
No 251
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=44.42 E-value=26 Score=34.91 Aligned_cols=45 Identities=16% Similarity=0.086 Sum_probs=33.6
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEeC----CeEEecCEEEEcCChh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----KETYSAGAVVLAVGIS 219 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~----G~~~~Ad~VV~A~p~~ 219 (496)
+++.|.+++++++|++|..+. ..+. +... +.++.+|++|+|+...
T Consensus 67 ~~~~~i~~~~~~~V~~id~~~--~~~~-~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDER--QTVS-VLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHCCEEEETEEEEEEETTT--TEEE-EEETTTTEEEEEECSEEEECCCEE
T ss_pred HHhcCCEEEeCCeEEEEEccC--cEEE-EEeccCCceEEEEcCEEEECCCCc
Confidence 456699999999999998765 4443 3331 3468999999999864
No 252
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=43.88 E-value=8.5 Score=36.04 Aligned_cols=51 Identities=8% Similarity=0.169 Sum_probs=34.7
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.++..+.++..++ |..+....+ ... +.+ ++.++.+|+||+|+..
T Consensus 68 l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~--~~~-~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 68 LMMNMRTQSEKYGTTIITET-IDHVDFSTQ--PFK-LFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEECSSS--SEE-EEETTCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHhhcCcEEEEeE-EEEeecCCC--ceE-EEECCCeEEEEeEEEEcccc
Confidence 55556666777788887655 555555542 233 344 5778999999999986
No 253
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=43.81 E-value=29 Score=34.82 Aligned_cols=42 Identities=21% Similarity=0.197 Sum_probs=30.9
Q ss_pred hcCCEEEcCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEcCCh
Q 010972 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 174 ~~G~~I~l~~~V~~I~~~~~~g~v~~V~~--~G~--~~~Ad~VV~A~p~ 218 (496)
..|.+++++++|++|..++ +.+. +.. +|+ ++.+|++|+|+..
T Consensus 78 ~~gi~~~~~~~V~~id~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAA--HTVE-IENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---CEEECSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECCC--CEEE-EeecCCCCEEEEECCEEEEeCCC
Confidence 4689999999999998766 4453 444 254 7899999999875
No 254
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=43.08 E-value=6.2 Score=40.85 Aligned_cols=45 Identities=22% Similarity=0.227 Sum_probs=31.4
Q ss_pred CCCCCCEEEcCCCcc-CCCCC-CCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 361 FTSFPNLFMAGDWIT-TRHGS-WRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 361 ~t~i~gL~lAGd~t~-~~~G~-~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
++++||||.||+-.. ..||+ ..+-.++-.|++.|+ +|++.+.+..
T Consensus 364 ~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~---~Ag~~aa~~~ 410 (540)
T 1chu_A 364 RTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGW---SAAEDITRRM 410 (540)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHH---HHHHHHHHHC
T ss_pred CCccCCEEeccccccccccCCCcCcchhHHHHHHHHH---HHHHHHHHhc
Confidence 478999999999763 46665 222223444678788 9999987764
No 255
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=42.57 E-value=18 Score=37.39 Aligned_cols=45 Identities=9% Similarity=0.321 Sum_probs=33.5
Q ss_pred HHHHHhcCCEEEc--CceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhH
Q 010972 169 MDSMRTRGCEFLD--GRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 221 (496)
Q Consensus 169 ~~~l~~~G~~I~l--~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~ 221 (496)
.+.+.+.++++.. +++|++|..+ +|++ +| ++++|.||+||.....
T Consensus 345 ~~al~~~nV~lv~~~~~~I~~it~~-------gv~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 345 YETYNRDNVHLVDIREAPIQEVTPE-------GIKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp HHHTTSTTEEEEETTTSCEEEEETT-------EEEESSC-EEECSEEEECCCCBSS
T ss_pred HHHhcCCCEEEEecCCCCceEEccC-------eEEeCCC-eeecCEEEECCccccc
Confidence 3445566788886 8999998632 2445 67 8999999999998753
No 256
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=40.85 E-value=42 Score=33.47 Aligned_cols=50 Identities=16% Similarity=0.062 Sum_probs=35.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+++.++.+. .++ +.+. |.+ +| +++.+|.||+|+...
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~--~~v~-V~~~~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADA--NTLL-VDLNDGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSS--SEEE-EEETTSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecC--CeEE-EEeCCCceEEEEcCEEEECCCCC
Confidence 44455666777899999998764 333 4453 555 46 689999999999874
No 257
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=40.61 E-value=6.3 Score=39.58 Aligned_cols=41 Identities=22% Similarity=0.266 Sum_probs=29.9
Q ss_pred CCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHH
Q 010972 362 TSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKL 407 (496)
Q Consensus 362 t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~ 407 (496)
.++||||+||.-+. ++| +.|-.++-.|..+|+ .|++.+.+.
T Consensus 402 ~~i~GLy~aGEv~~-v~g-~~GG~~l~~a~~~G~---~Ag~~aa~~ 442 (447)
T 2i0z_A 402 KFTNGLYFCGEVLD-IHG-YTGGYNITSALVTGR---IAGTTAGEN 442 (447)
T ss_dssp SSSBTEEECGGGBS-CBC-CTTTHHHHHHHHHHH---HHHHHHHHH
T ss_pred CcCCCEEEEEeecc-Ccc-CCCcHHHHHHHHHHH---HHHHHHHHh
Confidence 47999999998766 455 333334666889998 999888654
No 258
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=40.51 E-value=55 Score=30.23 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=26.0
Q ss_pred CCCCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 360 GFTSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 360 ~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
.+|.+||+|.|||-+....-. .--|+..|. .||..+.+.|
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~~~------~~~A~~~G~---~AA~~~~~yL 311 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVYRQ------AIVAAGSGC---MAALSCEKWL 311 (314)
T ss_dssp TBCSSTTEEECSTTTCSSCCC------HHHHHHHHH---HHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCcchH------HHHHHHHHH---HHHHHHHHHH
Confidence 357899999999976431111 223556666 8888877655
No 259
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=38.96 E-value=40 Score=32.71 Aligned_cols=42 Identities=21% Similarity=0.317 Sum_probs=31.6
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+...|.+++.+ .|++|..++ .. |++ +|.++.+|++|+|+...
T Consensus 65 ~~~~gv~~i~~-~v~~id~~~--~~---v~~~~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 65 LRAHGIQVVHD-SALGIDPDK--KL---VKTAGGAEFAYDRCVVAPGID 107 (401)
T ss_dssp HHHTTCEEECS-CEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEEe-EEEEEEccC--cE---EEecccceeecceeeeccCCc
Confidence 34568998765 688898765 33 345 67899999999999874
No 260
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=37.20 E-value=52 Score=32.82 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=34.3
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G--~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+++.++.+. + +. +.+. |.+ +| +++.+|.||+|+...
T Consensus 98 l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~~~-v~~~~G~~~~i~~d~lIiAtGs~ 150 (470)
T 1dxl_A 98 LTRGIEGLFKKNKVTYVKGYGKF-V--SP--SEIS-VDTIEGENTVVKGKHIIIATGSD 150 (470)
T ss_dssp HHHHHHHHHHHHTCEEEESCEEE-E--ET--TEEE-ECCSSSCCEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE-e--cC--CEEE-EEeCCCceEEEEcCEEEECCCCC
Confidence 33345555667799999999764 3 33 3343 554 46 679999999999863
No 261
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=36.89 E-value=13 Score=31.68 Aligned_cols=39 Identities=18% Similarity=0.128 Sum_probs=28.1
Q ss_pred CCCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 361 FTSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 361 ~t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
++..+++|.+||-.....+. ...|+..|. .||+.++..+
T Consensus 132 ~t~~~~i~a~GD~~~~~~~~------~~~A~~~g~---~aa~~i~~~~ 170 (180)
T 2ywl_A 132 RTSYPRVYAAGVARGKVPGH------AIISAGDGA---YVAVHLVSDL 170 (180)
T ss_dssp BCSSTTEEECGGGGTCCSCC------HHHHHHHHH---HHHHHHHHHH
T ss_pred CcCCCCEEEeecccCcchhh------HHHHHHhHH---HHHHHHHHHh
Confidence 45689999999976542212 355667777 9999998765
No 262
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=36.89 E-value=43 Score=33.57 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=35.4
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC--eE------EecCEEEEcCChhh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ET------YSAGAVVLAVGIST 220 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G--~~------~~Ad~VV~A~p~~~ 220 (496)
+.+.+.+.+++.|++++.++.|.. ++ +.+. |.+ +| ++ +.+|+||+|+....
T Consensus 98 l~~~~~~~~~~~gv~~~~g~~~~~---~~--~~v~-V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 98 LTGGIELLFKKNKVTYYKGNGSFE---DE--TKIR-VTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEES---SS--SEEE-EECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHhCCCEEEEEEEEEc---cC--CeEE-EEecCCCcccccccceEEeCEEEECcCCCC
Confidence 334455666778999999998752 33 4443 555 45 46 99999999998753
No 263
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=36.60 E-value=16 Score=37.73 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=31.7
Q ss_pred HhcCCEEEc--CceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhHH
Q 010972 173 RTRGCEFLD--GRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQ 222 (496)
Q Consensus 173 ~~~G~~I~l--~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~~ 222 (496)
.+.++++.. +++|++|..+ +|++ +|+++++|.||+||......
T Consensus 341 ~~~nV~lv~~~~~~I~~it~~-------gv~~~dG~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 341 NRPNVEAVAIKENPIREVTAK-------GVVTEDGVLHELDVLVFATGFDAVD 386 (540)
T ss_dssp GSTTEEEEETTTSCEEEECSS-------EEEETTCCEEECSEEEECCCBSCSS
T ss_pred cCCCEEEEeCCCCCccEEecC-------eEEcCCCCEEECCEEEECCccCccc
Confidence 345778875 7899888531 2445 78889999999999987543
No 264
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=36.59 E-value=6.3 Score=41.01 Aligned_cols=43 Identities=21% Similarity=0.187 Sum_probs=29.7
Q ss_pred CCCCCEEEcCCCccCCCCC-CCCCCCCccccccCcChHHHHHHHHHH
Q 010972 362 TSFPNLFMAGDWITTRHGS-WRGLMSPDSKLPTGWSTILEMEAFLKL 407 (496)
Q Consensus 362 t~i~gL~lAGd~t~~~~G~-~~~~~~megAv~SG~~~~~AA~~il~~ 407 (496)
++|||||-||+-+.+.+|. ..+-.++-.|+..|+ +|++.+.+.
T Consensus 519 ~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr---~Ag~~aa~~ 562 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGR---IAGDNAAKH 562 (566)
T ss_dssp CEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHH---HHHHHHHHH
T ss_pred CEeCCEEecccccCCCCCCCCCchhhHHHHHHHHH---HHHHHHHHH
Confidence 6899999999987666664 111122445678788 888888764
No 265
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=36.18 E-value=29 Score=34.56 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=31.4
Q ss_pred HhcCCEEEcCceeeeEEecCCCCeEEEEEeC-C-eEEecCEEEEcCCh
Q 010972 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGI 218 (496)
Q Consensus 173 ~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~-G-~~~~Ad~VV~A~p~ 218 (496)
++.|.+++++++|+.|..++ . .|.++ | .++.+|+||+|+..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~----~-~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGY----V-RVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHTTCEEETTCEEEEECSSE----E-EEECSSSEEEEECSEEEECCCE
T ss_pred HhcCcEEEecCEEEEEecCC----C-EEEECCceEEEEcCEEEECCCC
Confidence 56799999999999986432 2 24554 4 47999999999985
No 266
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=36.11 E-value=69 Score=33.84 Aligned_cols=29 Identities=14% Similarity=0.001 Sum_probs=23.8
Q ss_pred hHHHHHHHHHhcC---CEEEcCceeeeEEecC
Q 010972 164 IFEPWMDSMRTRG---CEFLDGRRVTDFIYDE 192 (496)
Q Consensus 164 l~~aL~~~l~~~G---~~I~l~~~V~~I~~~~ 192 (496)
+-+.|.+.+++.| ++|++++.|++++.++
T Consensus 121 le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 121 IERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 5566777787777 7999999999999864
No 267
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=35.78 E-value=11 Score=37.05 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 163 ~l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+.+.+++.|.++++++.|++| |+++.+|.||++++..
T Consensus 189 ~~~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a~G~~ 230 (385)
T 3klj_A 189 DGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVK 230 (385)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEECCCEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEECcCcc
Confidence 35666778888899999999999877 3457899999999864
No 268
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=35.56 E-value=5.8 Score=41.40 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=30.1
Q ss_pred CCCCCEEEcCCCccCCCCC-CCCCCCCccccccCcChHHHHHHHHHH
Q 010972 362 TSFPNLFMAGDWITTRHGS-WRGLMSPDSKLPTGWSTILEMEAFLKL 407 (496)
Q Consensus 362 t~i~gL~lAGd~t~~~~G~-~~~~~~megAv~SG~~~~~AA~~il~~ 407 (496)
++|||||-||.-+.+.+|. ..+-.++-.|+..|+ +|++.+.+.
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr---~Ag~~aa~~ 568 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGR---IAGASAAKF 568 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHH---HHHHHHHHT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHH---HHHHHHHHH
Confidence 6899999999977666665 111122445678888 999888753
No 269
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=34.18 E-value=6.4 Score=41.00 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=29.6
Q ss_pred CCCCCEEEcCCCccCCCCC-CCCCCCCccccccCcChHHHHHHHHHH
Q 010972 362 TSFPNLFMAGDWITTRHGS-WRGLMSPDSKLPTGWSTILEMEAFLKL 407 (496)
Q Consensus 362 t~i~gL~lAGd~t~~~~G~-~~~~~~megAv~SG~~~~~AA~~il~~ 407 (496)
++|||||-||.-+.+.+|. ..+-.++-.|+..|+ +|++.+.+.
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr---~Ag~~aa~~ 567 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGR---LAGEEAAKY 567 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHH---HHHHHHHHH
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHH---HHHHHHHHH
Confidence 6899999999987666665 111112344678888 898888754
No 270
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=33.63 E-value=37 Score=35.84 Aligned_cols=38 Identities=21% Similarity=0.149 Sum_probs=25.1
Q ss_pred CCCCC-CCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHH
Q 010972 358 MRGFT-SFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLK 406 (496)
Q Consensus 358 p~~~t-~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~ 406 (496)
+..++ .++||||||+-+.+ .|+ |.|+.+|. .|+..+..
T Consensus 377 ~tle~k~~~gLf~AGqinGt-tGY-------eEAaaqGl---~AG~nAa~ 415 (651)
T 3ces_A 377 PTLESKFIQGLFFAGQINGT-TGY-------EEAAAQGL---LAGLNAAR 415 (651)
T ss_dssp TTSBBSSSBTEEECSGGGTC-CCH-------HHHHHHHH---HHHHHHHH
T ss_pred ccccccCCCCeEEEEEecCC-cCh-------HHHHHHHH---HHHHHHHH
Confidence 34444 48999999997654 465 56667777 65544443
No 271
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=32.80 E-value=10 Score=39.81 Aligned_cols=46 Identities=24% Similarity=0.161 Sum_probs=31.1
Q ss_pred CCCCCCCEEEcCCCcc-CCCCC-CCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 360 GFTSFPNLFMAGDWIT-TRHGS-WRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 360 ~~t~i~gL~lAGd~t~-~~~G~-~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
.++++||||-||+-.. ..||+ ..+-.++-.|++.|+ .|++.+.+..
T Consensus 368 ~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr---~Ag~~aa~~~ 415 (602)
T 1kf6_A 368 CETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGR---LAGEQATERA 415 (602)
T ss_dssp SBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHH---HHHHHHHHHH
T ss_pred CccccCCEEEccccccccccCCCCCccHHHHHHHHHHH---HHHHHHHHhh
Confidence 3468999999999753 46665 122223445677788 8888887654
No 272
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=32.26 E-value=41 Score=35.41 Aligned_cols=37 Identities=22% Similarity=0.146 Sum_probs=23.9
Q ss_pred CCCCC-CCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHH
Q 010972 358 MRGFT-SFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFL 405 (496)
Q Consensus 358 p~~~t-~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il 405 (496)
+..++ .++|||+||+-+.+ .|+ |.|+.+|. .|+-...
T Consensus 382 ~tLe~k~~~gLf~AGqinGt-~Gy-------eEAaaqGl---~AG~nAa 419 (637)
T 2zxi_A 382 PTLETKKIRGLFHAGNFNGT-TGY-------EEAAGQGI---VAGINAA 419 (637)
T ss_dssp TTSBBSSSBTEEECGGGGTB-CSH-------HHHHHHHH---HHHHHHH
T ss_pred ccccccCCCCEEEeeecCCc-chH-------HHHHHHHH---HHHHHHH
Confidence 34444 48999999997665 566 55556777 5554433
No 273
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=30.82 E-value=76 Score=29.32 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=28.3
Q ss_pred CCCCCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 359 RGFTSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 359 ~~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
..+|.+||+|.+||-+...+-. ...|+..|. .||+.|.+.+
T Consensus 265 ~~~Ts~pgIyA~GDv~~~~~~~------~~~A~~~G~---~AA~~i~~~L 305 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVRDKGLRQ------IVTATGDGS---IAAQSAAEYI 305 (312)
T ss_dssp TSBCSSTTEEECSTTBSCSCCS------HHHHHHHHH---HHHHHHHHHH
T ss_pred CCccCCCCEEEEeecCCCcchH------HHHHHHHHH---HHHHHHHHHH
Confidence 3457899999999976432111 345667777 9999887655
No 274
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=30.68 E-value=44 Score=33.81 Aligned_cols=44 Identities=18% Similarity=0.077 Sum_probs=32.3
Q ss_pred hcCCEEEcCceeeeEEecCCCCeEEEEE-eCCe--EEecCEEEEcCChh
Q 010972 174 TRGCEFLDGRRVTDFIYDEERCCISDVV-CGKE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 174 ~~G~~I~l~~~V~~I~~~~~~g~v~~V~-~~G~--~~~Ad~VV~A~p~~ 219 (496)
+.|.++++++.|.+|..++ +.+..+. .+++ ++.+|++|+|+...
T Consensus 172 ~~~v~~~~~~~v~~i~~~~--~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKG--EYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp CTTEEEETTEEECCCEECS--SSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred hcCCEEEcCCEEEEEEcCC--cEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 4588999999999998766 3343222 2454 68999999998753
No 275
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=30.17 E-value=7.7 Score=37.29 Aligned_cols=43 Identities=23% Similarity=0.200 Sum_probs=27.7
Q ss_pred CCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 363 SFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 363 ~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
-+||||++|-......|.-.+.-.+-+-++||. .||+.|++.|
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~---~~a~~~~~~~ 324 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGV---HAAEQILKHF 324 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHH---HHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhH---HHHHHHHHHh
Confidence 479999999866422222111112333368999 9999999876
No 276
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=29.89 E-value=78 Score=31.52 Aligned_cols=49 Identities=12% Similarity=0.090 Sum_probs=33.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G--~~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.|.+++.++.+. + +. +.+. |.+ +| +++.+|++|+|+..
T Consensus 95 l~~~~~~~~~~~~v~~~~g~~~~-i--~~--~~~~-v~~~~G~~~~~~~d~lviAtG~ 146 (468)
T 2qae_A 95 LTGGVEYLFKKNKVTYYKGEGSF-E--TA--HSIR-VNGLDGKQEMLETKKTIIATGS 146 (468)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEE-E--ET--TEEE-EEETTSCEEEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE-e--eC--CEEE-EEecCCceEEEEcCEEEECCCC
Confidence 33344555667799999998653 3 33 3443 555 56 67999999999986
No 277
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=29.83 E-value=6.9 Score=40.08 Aligned_cols=42 Identities=19% Similarity=0.102 Sum_probs=28.0
Q ss_pred CCCCCEEEcCCCccCCCCC-CCCCCCCccccccCcChHHHHHHHHH
Q 010972 362 TSFPNLFMAGDWITTRHGS-WRGLMSPDSKLPTGWSTILEMEAFLK 406 (496)
Q Consensus 362 t~i~gL~lAGd~t~~~~G~-~~~~~~megAv~SG~~~~~AA~~il~ 406 (496)
+||||||-||.-+...+|. ..+-.++-.|+.+|+ +|++.+.+
T Consensus 466 ~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr---~Ag~~aa~ 508 (510)
T 4at0_A 466 EPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGR---RAGISAAK 508 (510)
T ss_dssp SEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHH---HHHHHHHC
T ss_pred CCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHH---HHHHHHHh
Confidence 6899999999977665554 111112445667787 88887753
No 278
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=28.47 E-value=13 Score=39.40 Aligned_cols=46 Identities=26% Similarity=0.262 Sum_probs=30.5
Q ss_pred CCCCCCCEEEcCCCcc-CCCCC-CCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 360 GFTSFPNLFMAGDWIT-TRHGS-WRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 360 ~~t~i~gL~lAGd~t~-~~~G~-~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
.+++|||||-||+-.. ..||+ ..+-.++-.+++.|+ +|++.+.+..
T Consensus 381 ~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr---~Ag~~aa~~~ 428 (660)
T 2bs2_A 381 GEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGM---IVGEYFAEHC 428 (660)
T ss_dssp SBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHH---HHHHHHHHHH
T ss_pred CceecCCEEeccccccccccCCCCCchHHHHHHHHHHH---HHHHHHHHHh
Confidence 3468999999999643 46665 122223445678888 8888877654
No 279
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=27.56 E-value=6.3 Score=38.19 Aligned_cols=46 Identities=20% Similarity=0.237 Sum_probs=28.6
Q ss_pred CCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHcCCCC
Q 010972 364 FPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQWRK 412 (496)
Q Consensus 364 i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg~~~ 412 (496)
+||||.+|-......|.-.+--.+-+=++||. .||+.|++.|..++
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~---~~a~~~~~~~~~~~ 338 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGV---KAAHEAIRVFDLRK 338 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCH---HHHHHHHHHHHhhh
Confidence 68999999866522222000001222268998 99999999986554
No 280
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=27.51 E-value=52 Score=32.42 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=31.5
Q ss_pred HHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChh
Q 010972 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (496)
Q Consensus 172 l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~ 219 (496)
+++.|.+++.+ .|+.|..++ .. |.+ +|+++.+|.+|+|+...
T Consensus 66 ~~~~gv~~~~~-~v~~id~~~--~~---v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 66 LPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHhcCCEEEEE-EEEEEECCC--CE---EEECCCcEEECCEEEEcCCcc
Confidence 45578999875 899998655 32 445 56789999999998764
No 281
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=27.49 E-value=59 Score=32.28 Aligned_cols=46 Identities=17% Similarity=0.068 Sum_probs=31.4
Q ss_pred HHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCCh
Q 010972 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (496)
Q Consensus 167 aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~ 218 (496)
.+.+.+++.|.+++.++.+. .+. +.+. |.++|+++.+|++|+|+..
T Consensus 94 ~~~~~~~~~~v~~~~g~~~~---i~~--~~~~-v~~~g~~~~~d~lviAtG~ 139 (455)
T 2yqu_A 94 GVEFLFKKNGIARHQGTARF---LSE--RKVL-VEETGEELEARYILIATGS 139 (455)
T ss_dssp HHHHHHHHHTCEEEESCEEE---SSS--SEEE-ETTTCCEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecC--CeEE-EeeCCEEEEecEEEECCCC
Confidence 34455666799999988653 233 3343 4335678999999999986
No 282
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=26.14 E-value=38 Score=34.91 Aligned_cols=42 Identities=19% Similarity=0.379 Sum_probs=30.7
Q ss_pred HHhcCCEEE--cCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEcCChhhH
Q 010972 172 MRTRGCEFL--DGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 221 (496)
Q Consensus 172 l~~~G~~I~--l~~~V~~I~~~~~~g~v~~V~~-~G~~~~Ad~VV~A~p~~~~ 221 (496)
+.+.++++. ..++|++|..+ +|++ +| ++++|.||+||.....
T Consensus 353 l~~~~V~lvd~~~~~I~~it~~-------gv~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 353 YNRDNVELVDLRSTPIVGMDET-------GIVTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGSTTEEEEETTTSCEEEEETT-------EEEESSC-EEECSEEEECCCEEES
T ss_pred hcCCCEEEEeCCCCCceEEeCC-------cEEeCCC-ceecCEEEECCccccc
Confidence 345577877 36889988632 2445 67 9999999999998654
No 283
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=25.88 E-value=87 Score=31.35 Aligned_cols=50 Identities=12% Similarity=0.172 Sum_probs=34.1
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CC------------eEEecCEEEEcCChh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK------------ETYSAGAVVLAVGIS 219 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G------------~~~~Ad~VV~A~p~~ 219 (496)
+.+.+.+.+++.|.+++.++.+. .++ +.+. |.+ +| .++.+|.||+|+...
T Consensus 97 l~~~~~~~~~~~gv~~~~g~~~~---~~~--~~v~-v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 97 LTGGLAGMAKSRKVDVIQGDGQF---LDP--HHLE-VSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEE---EET--TEEE-EEEEEEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhCCcEEEeeEEEE---ccC--CEEE-EEecCCcccccccccCcceEEEcCEEEECCCCC
Confidence 33345555677899999998764 233 3443 543 34 578999999999875
No 284
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=24.67 E-value=86 Score=31.53 Aligned_cols=53 Identities=17% Similarity=0.149 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecC--CCCeEEEEEe-CCe--EEecCEEEEcCCh
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDE--ERCCISDVVC-GKE--TYSAGAVVLAVGI 218 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~--~~g~v~~V~~-~G~--~~~Ad~VV~A~p~ 218 (496)
+.+.+.+.+++.|.+++.++ |+.|...+ +++.+ .|.+ +|+ ++.+|.+|+|+..
T Consensus 97 ~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~-~V~~~~g~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 97 QSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRI-KATAADGSTSEHEADVVLVATGA 154 (499)
T ss_dssp HHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEE-EEECTTSCEEEEEESEEEECCCE
T ss_pred HHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEE-EEEeCCCcEEEEEeCEEEEcCCC
Confidence 33445566677899999997 65554410 00233 3555 455 7999999999975
No 285
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=24.55 E-value=28 Score=33.72 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=35.9
Q ss_pred hHHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChhhH
Q 010972 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 221 (496)
Q Consensus 164 l~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~~~ 221 (496)
+.+.|.+.+++.|++|+++++|++|+.. .++.||.||.|...+..
T Consensus 100 l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 100 LVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCch
Confidence 6677888888889999999999988521 12579999999998765
No 286
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=24.53 E-value=94 Score=30.93 Aligned_cols=44 Identities=25% Similarity=0.326 Sum_probs=31.1
Q ss_pred HHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 168 L~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+++.|.+++.++.+. + +. ..+ .++|+++.+|+||+|+...
T Consensus 99 ~~~~~~~~gv~~~~g~~~~-~--~~--~~v---~v~g~~~~~d~lViATGs~ 142 (464)
T 2eq6_A 99 VGTLLKGNGVELLRGFARL-V--GP--KEV---EVGGERYGAKSLILATGSE 142 (464)
T ss_dssp HHHHHHHTTCEEEESCEEE-E--ET--TEE---EETTEEEEEEEEEECCCEE
T ss_pred HHHHHHhCCCEEEeeeEEE-c--cC--CEE---EEccEEEEeCEEEEcCCCC
Confidence 3445667899999998664 3 33 333 3447789999999999863
No 287
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=24.31 E-value=25 Score=35.37 Aligned_cols=40 Identities=18% Similarity=0.171 Sum_probs=30.0
Q ss_pred CCCCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHHHHcC
Q 010972 360 GFTSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFLKLFQ 409 (496)
Q Consensus 360 ~~t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il~~lg 409 (496)
.+|..+|+|.+||-+.. +.. .-.|+..|. .||+.|.+.+.
T Consensus 405 ~~Ts~~~VfA~GD~~~g-~~~------v~~A~~~G~---~aA~~i~~~L~ 444 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRG-ASL------VVWAIRDGR---DAAEGIHAYAK 444 (456)
T ss_dssp CBCSSTTEEECGGGGSS-CCS------HHHHHHHHH---HHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCC-chH------HHHHHHHHH---HHHHHHHHHhh
Confidence 34678999999997643 222 566778888 99999998773
No 288
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=23.90 E-value=12 Score=39.58 Aligned_cols=44 Identities=18% Similarity=0.184 Sum_probs=31.5
Q ss_pred CCCCCEEEcCCCcc-CCCCC-CCCCCCCccccccCcChHHHHHHHHHHc
Q 010972 362 TSFPNLFMAGDWIT-TRHGS-WRGLMSPDSKLPTGWSTILEMEAFLKLF 408 (496)
Q Consensus 362 t~i~gL~lAGd~t~-~~~G~-~~~~~~megAv~SG~~~~~AA~~il~~l 408 (496)
++|||||-||+-.. ..||+ ..+-.++-.+++.|+ +|++.+.+..
T Consensus 387 t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr---~Ag~~aa~~~ 432 (621)
T 2h88_A 387 KVVPGLYACGEAASASVHGANRLGANSLLDLVVFGR---ACALTIAETC 432 (621)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHH---HHHHHHHHHC
T ss_pred cccCceEEccccccccccCCCCCchHhHHHHHHHHH---HHHHHHHHhh
Confidence 67999999999654 46775 223334556778888 9999887764
No 289
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=23.20 E-value=1.4e+02 Score=29.74 Aligned_cols=47 Identities=6% Similarity=0.070 Sum_probs=32.3
Q ss_pred HHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-C-C-eEEecCEEEEcCChh
Q 010972 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-K-ETYSAGAVVLAVGIS 219 (496)
Q Consensus 167 aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~-G-~~~~Ad~VV~A~p~~ 219 (496)
.+.+.+++.|.+++.++.+ .+ +. +.+. |.+ + | +++.+|+||+|+...
T Consensus 102 ~~~~~~~~~gv~~~~g~~~-~~--~~--~~~~-v~~~~gg~~~~~~d~lViAtGs~ 151 (474)
T 1zmd_A 102 GIAHLFKQNKVVHVNGYGK-IT--GK--NQVT-ATKADGGTQVIDTKNILIATGSE 151 (474)
T ss_dssp HHHHHHHHTTCEEEESEEE-EE--ET--TEEE-EECTTSCEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCCEEEEEEEE-Ee--cC--CEEE-EEecCCCcEEEEeCEEEECCCCC
Confidence 3455567789999999754 23 33 3443 555 3 4 579999999999863
No 290
>4g5s_E PINS homolog, G-protein-signaling modulator 2; galpha, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 3.62A {Mus musculus}
Probab=21.47 E-value=35 Score=18.68 Aligned_cols=15 Identities=27% Similarity=0.530 Sum_probs=10.8
Q ss_pred CCCcccccCCCCCcc
Q 010972 410 WRKMNLTLKHCAPST 424 (496)
Q Consensus 410 ~~~~~~~~~~~~~~~ 424 (496)
++++-+++|+|+|++
T Consensus 11 cq~srlddqrcapps 25 (26)
T 4g5s_E 11 CQGSRLDDQRCAPPS 25 (26)
T ss_dssp HSCCCCSSSCBCCC-
T ss_pred hcccccccccCCCCC
Confidence 355558899999875
No 291
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=20.90 E-value=1.1e+02 Score=30.55 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEe-CCe--EEecCEEEEcCChh
Q 010972 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE--TYSAGAVVLAVGIS 219 (496)
Q Consensus 165 ~~aL~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~-~G~--~~~Ad~VV~A~p~~ 219 (496)
...+.+.+++.|.+++.++ |+.| +. +.+. |.+ +|+ ++.+|++|+|+...
T Consensus 108 ~~~~~~~~~~~gv~~~~g~-~~~i--~~--~~~~-v~~~~g~~~~~~~d~lviAtGs~ 159 (479)
T 2hqm_A 108 NGIYQKNLEKEKVDVVFGW-ARFN--KD--GNVE-VQKRDNTTEVYSANHILVATGGK 159 (479)
T ss_dssp HHHHHHHHHHTTEEEEEEE-EEEC--TT--SCEE-EEESSSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhCCCEEEEeE-EEEe--eC--CEEE-EEeCCCcEEEEEeCEEEEcCCCC
Confidence 3344455667789998885 5444 33 3343 555 465 79999999999753
No 292
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=20.84 E-value=16 Score=35.97 Aligned_cols=39 Identities=13% Similarity=0.290 Sum_probs=25.0
Q ss_pred CCCCCEEEcCCCccCCCCCCCCCCCCccccccCcChHHHHHHHH
Q 010972 362 TSFPNLFMAGDWITTRHGSWRGLMSPDSKLPTGWSTILEMEAFL 405 (496)
Q Consensus 362 t~i~gL~lAGd~t~~~~G~~~~~~~megAv~SG~~~~~AA~~il 405 (496)
..+||||+||+-+.- +| ++|-..+-.|-.||+ .|++.+.
T Consensus 361 ~~~~gly~~GE~ldv-~g-~~GGynlq~a~~sg~---~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDV-TG-WLGGYNFQWAWSSAY---ACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSC-EE-CTTTHHHHHHHHHHH---HHHHHHH
T ss_pred cCCCCEEEEEEeEEe-cc-CCCCHHHHHHHHHHH---HHHHHHh
Confidence 368999999986652 22 111113556778888 8887763
No 293
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.71 E-value=2.2e+02 Score=28.14 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=31.6
Q ss_pred HHHHHHhcCCEEEcCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEcCChh
Q 010972 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (496)
Q Consensus 168 L~~~l~~~G~~I~l~~~V~~I~~~~~~g~v~~V~~~G~~~~Ad~VV~A~p~~ 219 (496)
+.+.+++.|.+++.++.+. + ++ .. |.++++++.+|++|+|+...
T Consensus 102 ~~~~~~~~gv~~~~g~~~~-~--~~--~~---v~v~~~~~~~d~lviATGs~ 145 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV-L--DG--KQ---VEVDGQRIQCEHLLLATGSS 145 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE-E--ET--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEEEEEEE-c--cC--CE---EEEeeEEEEeCEEEEeCCCC
Confidence 3455667899999998764 2 23 33 44555789999999999863
Done!