BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>010974
MSDSEKLMALKKAYADIILNTAKEAAARIMVSERKTIRYQQELFAAKEDALRMLLRLKQM
LDAKVNEAQVVSLCQQRKIDELEAQLGEAEDIVKDLRADLREAQDELERATYNEKQLLDE
QNSTGDVATVMTPSLENRLNTSEAAMPCLPDVQPDSVMASDVGNSTLNGTYENKMCYSEN
GSHKDNCYFCNSSFASIVMRRKEPKLYRNGCTQRIHAFERNILEGNLSLPGQVEQQIKNG
SCTQEDEELCKNLDRGANQTCRIEDNPNESRLKQENSNSISVHAKSFCKKRKRAARYKKS
RIRNFPDQVAQTTQKSDISSTTLLNAVDNYVKHKEESKIFGNNIQMTPASLSALNSPSDT
TEMILQSGCEEVPKSDTVQTTTNNDDLLIDRLKLTRQESGPAELTEMSACKTDLEAVNLS
PLNSNVKSSNLTEGVSSQSLNDKFLKYTFQRKRKKESLSSPDGYSSLEEGVMKRRMVVNP
NGSVESENPSLITESS

High Scoring Gene Products

Symbol, full name Information P value
AT1G74860 protein from Arabidopsis thaliana 4.8e-54
AT1G19010 protein from Arabidopsis thaliana 6.0e-32

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  010974
        (496 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037261 - symbol:AT1G74860 "AT1G74860" species...   438  4.8e-54   2
TAIR|locus:2011231 - symbol:AT1G19010 "AT1G19010" species...   350  6.0e-32   1


>TAIR|locus:2037261 [details] [associations]
            symbol:AT1G74860 "AT1G74860" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC008263 EMBL:BT025554
            IPI:IPI00539042 RefSeq:NP_565092.1 UniGene:At.34833
            EnsemblPlants:AT1G74860.1 GeneID:843825 KEGG:ath:AT1G74860
            TAIR:At1g74860 InParanoid:Q9SSG6 OMA:PREHEND PhylomeDB:Q9SSG6
            ProtClustDB:CLSN2689205 Genevestigator:Q9SSG6 Uniprot:Q9SSG6
        Length = 400

 Score = 438 (159.2 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
 Identities = 110/257 (42%), Positives = 153/257 (59%)

Query:     1 MSDSEKLMALKKAYADIILNTAKEAAARIMVSERKTIRYQQELFAAKEDALRMLLRLKQM 60
             M+D E L ALK+AYAD ILNT KEAAAR+MVSE+K  RYQQEL   + +AL  L+RLKQM
Sbjct:     1 MADPETLAALKRAYADTILNTTKEAAARVMVSEKKARRYQQELVTVRNEALHTLVRLKQM 60

Query:    61 LDAKVNEAQVVSLCQQRKIDELEAQLGEAEDIVKDLRADLREAQDELERATYNEKQLLD- 119
             LD+KV E ++ SL QQ+K++ELEAQLGEAEDIV +LR +LR   DEL++ T  +K L   
Sbjct:    61 LDSKVKETEMQSLKQQQKVEELEAQLGEAEDIVGELRLELRVLHDELKKLTDGQKHLKKN 120

Query:   120 -EQN---STGDVATVMTPSLENRLNTSEAAMPCLPDVQPDSVMASDVGNSTLNGTYE-NK 174
              E+N   +  D A  + P +      +EA   C+P  Q  SV+A+ +   +L      N+
Sbjct:   121 HEENLCWNNRDAAVSVMPEVSCSHENTEAVGFCIPVEQNGSVVANGIKVPSLTRINSINR 180

Query:   175 MCYSENGSHKDNCYFCNSSFASIVMRRKEPKLYRNGCTQRIHAFERNILEGNLSLPGQVE 234
               Y +N   KD C++   +  SI+ +R+E +    G  Q IH  + ++  G LS   +V 
Sbjct:   181 CSYKDN---KDQCHY---TLPSILTKRRETE----GLAQMIHTVDSSMANGVLSSSVEVG 230

Query:   235 QQIKNGSCTQEDEELCK 251
               + +G C  E    CK
Sbjct:   231 D-VNDGVCLHEVSS-CK 245

 Score = 138 (53.6 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
 Identities = 39/96 (40%), Positives = 57/96 (59%)

Query:   403 ELTEMSACKTDLEAVNLSPLNSNVKSSNLTEGVSSQSLN-DKFLKYTFQRKRKKESLSSP 461
             E++E  A K + E+      N  V +S L E     +L+ ++ +KYTF+RKRKKE LS+ 
Sbjct:   303 EISETEARKEEKESCE----NMEVSASPLCEETPVLALSKNRCIKYTFKRKRKKEVLSNL 358

Query:   462 DGYSSLEEGV-MKRRMVVNPNGSVESENPSLITESS 496
             +G SS EE   MK++ V   +G +ES  PS  +ESS
Sbjct:   359 EGDSSFEESRNMKQKTVEKDDGYLESLKPSFTSESS 394


>TAIR|locus:2011231 [details] [associations]
            symbol:AT1G19010 "AT1G19010" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AF360209 EMBL:AY040057
            IPI:IPI00531765 RefSeq:NP_564068.2 UniGene:At.15072 IntAct:Q9C5J5
            EnsemblPlants:AT1G19010.1 GeneID:838482 KEGG:ath:AT1G19010
            TAIR:At1g19010 InParanoid:Q9C5J5 OMA:REDSSNH PhylomeDB:Q9C5J5
            ProtClustDB:CLSN2680035 ArrayExpress:Q9C5J5 Genevestigator:Q9C5J5
            Uniprot:Q9C5J5
        Length = 319

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 104/286 (36%), Positives = 155/286 (54%)

Query:     1 MSDSEKLMALKKAYADIILNTAKEAAARIMVSERKTIRYQQELFAAKEDALRMLLRLKQM 60
             M+D EKL ALKKAYA+ ILNTAKEAAAR+M++ERK   YQQEL + +++ALR  LRLKQ+
Sbjct:     1 MTDPEKLTALKKAYAETILNTAKEAAARVMITERKARGYQQELASVRDEALRACLRLKQI 60

Query:    61 LDAKVNEAQVVSLCQQRKIDELEAQLGEAEDIVKDLRADLREAQDELERATYNEKQLLDE 120
              D+KV EA+++SL +Q+KI+ELEAQLGEAEDIV +LR +LRE++  LE+     +  L +
Sbjct:    61 YDSKVKEAEMISLQKQQKIEELEAQLGEAEDIVGELRTELRESRYLLEKLANGCQTNLSK 120

Query:   121 QNSTGDVATVMTPSLENRLNTSEAAMPCLPDVQPDSVMASDVGNSTLNGTYENKMCYSEN 180
             +    + A     SLE R ++S      +      SV+   + +  L+    N+  Y EN
Sbjct:   121 EEKAPNEAV----SLEVREDSSNHERSVVA-----SVIKPHMSDRDLS---INRCSYKEN 168

Query:   181 GSHKDNCYFCNSSFASIVMRRK--EPKLYRNGCTQ---RIHAFERNILEGNLSL---P-G 231
                KD C +   S  S     +  E       C        A +    E ++ L   P  
Sbjct:   169 ---KDPCLYTLPSILSRCREAEVVERNTINGDCADVESLTEARKEEAKENDIELSTTPLS 225

Query:   232 QVEQQIKNGSCTQEDEELCKNLDRGANQTCRIEDNPNESRLKQENS 277
               E+Q    S  ++  +   N   G   + + +D+ +ESR ++  +
Sbjct:   226 PSEKQCIKFSYKRKHNKDGSNSPEGGGSSSQDDDDDDESRSRRHKT 271


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.124   0.335    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      496       481   0.00080  119 3  11 23  0.49    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  241 KB (2130 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  57.00u 0.09s 57.09t   Elapsed:  00:00:06
  Total cpu time:  57.00u 0.09s 57.09t   Elapsed:  00:00:06
  Start:  Tue May 21 07:06:08 2013   End:  Tue May 21 07:06:14 2013

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